Query 004816
Match_columns 729
No_of_seqs 597 out of 4616
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 06:41:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004816.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004816hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3azo_A Aminopeptidase; POP fam 100.0 2E-69 6.8E-74 626.5 72.8 637 68-727 3-662 (662)
2 4a5s_A Dipeptidyl peptidase 4 100.0 5.5E-55 1.9E-59 510.9 54.3 587 77-716 3-730 (740)
3 2ecf_A Dipeptidyl peptidase IV 100.0 9.9E-53 3.4E-57 493.0 56.8 587 76-712 20-740 (741)
4 3o4h_A Acylamino-acid-releasin 100.0 5.9E-53 2E-57 480.7 50.6 537 90-713 23-581 (582)
5 2xdw_A Prolyl endopeptidase; a 100.0 3E-51 1E-55 477.2 59.6 578 89-713 74-706 (710)
6 3iuj_A Prolyl endopeptidase; h 100.0 2.3E-51 7.9E-56 475.7 57.9 574 91-714 81-687 (693)
7 2xe4_A Oligopeptidase B; hydro 100.0 3.5E-51 1.2E-55 476.7 56.1 568 91-712 119-742 (751)
8 2bkl_A Prolyl endopeptidase; m 100.0 3.4E-50 1.2E-54 466.9 57.9 583 90-721 71-685 (695)
9 1xfd_A DIP, dipeptidyl aminope 100.0 8.5E-51 2.9E-55 475.3 48.0 588 76-712 2-722 (723)
10 1yr2_A Prolyl oligopeptidase; 100.0 1.8E-49 6.1E-54 464.1 58.3 575 91-716 111-722 (741)
11 2z3z_A Dipeptidyl aminopeptida 100.0 3.1E-49 1.1E-53 460.7 58.9 566 90-711 83-706 (706)
12 1z68_A Fibroblast activation p 100.0 7E-49 2.4E-53 458.7 46.8 567 91-712 62-719 (719)
13 4hvt_A Ritya.17583.B, post-pro 100.0 1.2E-41 4.1E-46 386.9 53.2 583 82-712 64-707 (711)
14 4ao6_A Esterase; hydrolase, th 99.9 8.2E-25 2.8E-29 221.0 19.9 213 459-712 32-259 (259)
15 3f67_A Putative dienelactone h 99.9 2.8E-24 9.6E-29 214.3 19.5 222 457-710 5-241 (241)
16 3hxk_A Sugar hydrolase; alpha- 99.9 6.5E-24 2.2E-28 216.6 21.4 231 461-712 17-267 (276)
17 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 1.5E-23 5E-28 225.2 24.5 234 456-713 125-366 (386)
18 1mpx_A Alpha-amino acid ester 99.9 4E-23 1.4E-27 233.9 22.7 259 457-726 24-369 (615)
19 3bxp_A Putative lipase/esteras 99.9 3.5E-23 1.2E-27 211.4 19.8 233 459-711 5-271 (277)
20 2b9v_A Alpha-amino acid ester 99.9 6.5E-23 2.2E-27 232.9 23.0 258 458-726 37-381 (652)
21 2wtm_A EST1E; hydrolase; 1.60A 99.9 8.2E-23 2.8E-27 205.4 20.8 231 461-712 4-250 (251)
22 1vlq_A Acetyl xylan esterase; 99.9 7.7E-23 2.6E-27 215.3 20.8 239 456-712 66-335 (337)
23 3k2i_A Acyl-coenzyme A thioest 99.9 1.9E-22 6.5E-27 219.0 24.4 224 471-714 144-414 (422)
24 3ksr_A Putative serine hydrola 99.9 1.7E-23 5.9E-28 215.0 15.3 236 458-714 6-244 (290)
25 2i3d_A AGR_C_3351P, hypothetic 99.9 7.6E-22 2.6E-26 198.1 25.8 211 457-715 20-237 (249)
26 3hlk_A Acyl-coenzyme A thioest 99.9 1.6E-22 5.5E-27 220.7 22.3 227 471-717 160-433 (446)
27 3ebl_A Gibberellin receptor GI 99.9 4.1E-22 1.4E-26 211.5 24.6 245 454-714 60-354 (365)
28 3bjr_A Putative carboxylestera 99.9 4.5E-23 1.5E-27 211.4 16.0 234 457-710 18-282 (283)
29 3ga7_A Acetyl esterase; phosph 99.9 7.1E-22 2.4E-26 206.9 24.5 230 458-712 63-323 (326)
30 1zi8_A Carboxymethylenebutenol 99.9 9.1E-23 3.1E-27 202.6 16.0 211 460-713 5-234 (236)
31 2o2g_A Dienelactone hydrolase; 99.9 3.4E-22 1.2E-26 196.4 19.8 209 457-712 11-223 (223)
32 3fcx_A FGH, esterase D, S-form 99.9 5.5E-23 1.9E-27 210.4 14.3 242 458-712 16-281 (282)
33 3fak_A Esterase/lipase, ESTE5; 99.9 3E-22 1E-26 209.2 19.8 221 471-712 66-309 (322)
34 3doh_A Esterase; alpha-beta hy 99.9 5.3E-22 1.8E-26 212.4 21.9 218 458-710 144-378 (380)
35 3trd_A Alpha/beta hydrolase; c 99.9 1.3E-21 4.3E-26 190.5 21.8 200 457-707 5-207 (208)
36 3pfb_A Cinnamoyl esterase; alp 99.9 8.2E-22 2.8E-26 199.9 20.1 232 457-710 21-267 (270)
37 4fbl_A LIPS lipolytic enzyme; 99.9 2.9E-22 1E-26 205.0 16.0 207 492-710 51-281 (281)
38 1l7a_A Cephalosporin C deacety 99.9 1.1E-21 3.7E-26 204.1 18.9 237 457-712 55-317 (318)
39 3i6y_A Esterase APC40077; lipa 99.9 7.8E-22 2.7E-26 201.7 17.3 243 457-712 16-279 (280)
40 3pe7_A Oligogalacturonate lyas 99.9 4.5E-21 1.6E-25 205.6 24.1 311 93-432 40-386 (388)
41 2hm7_A Carboxylesterase; alpha 99.9 1.4E-21 4.8E-26 203.1 18.9 236 455-712 45-310 (310)
42 3fcy_A Xylan esterase 1; alpha 99.9 5.3E-22 1.8E-26 209.7 15.4 234 457-710 81-344 (346)
43 2fuk_A XC6422 protein; A/B hyd 99.9 6.1E-21 2.1E-25 187.3 21.4 206 457-712 9-217 (220)
44 4e15_A Kynurenine formamidase; 99.9 2.6E-22 8.9E-27 207.9 12.0 206 459-689 59-280 (303)
45 1lzl_A Heroin esterase; alpha/ 99.9 2.8E-21 9.7E-26 202.0 19.7 237 457-714 50-319 (323)
46 3ain_A 303AA long hypothetical 99.9 1.2E-20 4.3E-25 196.8 24.4 234 456-712 63-321 (323)
47 3qh4_A Esterase LIPW; structur 99.9 9.4E-22 3.2E-26 204.9 15.6 234 456-712 58-316 (317)
48 3ls2_A S-formylglutathione hyd 99.9 1.8E-21 6E-26 199.1 17.3 242 458-712 15-279 (280)
49 2zsh_A Probable gibberellin re 99.9 2.6E-21 8.8E-26 204.9 19.0 236 458-709 72-350 (351)
50 2wir_A Pesta, alpha/beta hydro 99.9 2.8E-21 9.5E-26 201.1 18.4 236 455-712 48-312 (313)
51 1lns_A X-prolyl dipeptidyl ami 99.9 6.2E-21 2.1E-25 219.7 21.8 245 468-726 182-536 (763)
52 3h04_A Uncharacterized protein 99.9 5.5E-20 1.9E-24 186.3 26.3 226 459-712 4-274 (275)
53 3e4d_A Esterase D; S-formylglu 99.9 3.3E-21 1.1E-25 196.8 17.0 242 458-712 15-278 (278)
54 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.9E-20 1.7E-24 199.6 27.2 245 154-437 143-394 (415)
55 2c7b_A Carboxylesterase, ESTE1 99.9 1.5E-20 5E-25 195.5 22.2 235 455-712 45-309 (311)
56 3fnb_A Acylaminoacyl peptidase 99.9 2.6E-20 9E-25 201.0 24.7 235 457-713 134-403 (405)
57 2o7r_A CXE carboxylesterase; a 99.9 3.3E-21 1.1E-25 203.0 16.0 237 457-712 54-332 (338)
58 4a5s_A Dipeptidyl peptidase 4 99.9 5.6E-20 1.9E-24 214.6 28.0 312 92-436 65-455 (740)
59 1vkh_A Putative serine hydrola 99.9 1.1E-20 3.7E-25 192.5 19.1 203 489-707 38-272 (273)
60 4b6g_A Putative esterase; hydr 99.9 2.9E-21 1E-25 197.8 14.1 241 458-712 22-283 (283)
61 1jkm_A Brefeldin A esterase; s 99.8 2.6E-20 8.9E-25 197.7 20.9 236 457-711 81-358 (361)
62 3k6k_A Esterase/lipase; alpha/ 99.8 2E-20 6.9E-25 195.3 19.7 211 490-714 78-311 (322)
63 2hdw_A Hypothetical protein PA 99.8 1.6E-20 5.5E-25 199.9 19.3 238 456-711 66-367 (367)
64 4h0c_A Phospholipase/carboxyle 99.8 5.4E-21 1.8E-25 185.9 14.0 186 489-708 19-209 (210)
65 3hju_A Monoglyceride lipase; a 99.8 6.2E-20 2.1E-24 193.2 22.4 234 462-713 39-314 (342)
66 3llc_A Putative hydrolase; str 99.8 5.2E-20 1.8E-24 186.1 20.6 229 459-709 12-268 (270)
67 2pbl_A Putative esterase/lipas 99.8 2.8E-20 9.6E-25 188.1 18.3 199 459-691 39-245 (262)
68 1z68_A Fibroblast activation p 99.8 3.4E-20 1.2E-24 216.0 21.6 311 78-437 3-402 (719)
69 3vis_A Esterase; alpha/beta-hy 99.8 2.4E-20 8.2E-25 193.3 18.0 191 468-714 80-278 (306)
70 2hqs_A Protein TOLB; TOLB, PAL 99.8 5.5E-19 1.9E-23 191.3 28.8 258 99-403 143-403 (415)
71 1jfr_A Lipase; serine hydrolas 99.8 7.3E-20 2.5E-24 185.1 20.0 178 489-714 51-234 (262)
72 2uz0_A Esterase, tributyrin es 99.8 4.2E-20 1.4E-24 186.8 18.1 243 458-712 7-257 (263)
73 3pe6_A Monoglyceride lipase; a 99.8 2.2E-19 7.7E-24 184.4 23.6 234 462-713 21-296 (303)
74 1fj2_A Protein (acyl protein t 99.8 1.6E-19 5.5E-24 178.5 20.3 189 489-713 20-230 (232)
75 4fhz_A Phospholipase/carboxyle 99.8 1E-19 3.4E-24 184.9 17.9 191 488-712 62-267 (285)
76 3dkr_A Esterase D; alpha beta 99.8 2E-19 7E-24 179.5 19.6 210 491-711 21-249 (251)
77 1jjf_A Xylanase Z, endo-1,4-be 99.8 7.7E-19 2.6E-23 178.2 24.1 218 456-712 30-263 (268)
78 3c5m_A Oligogalacturonate lyas 99.8 1.1E-19 3.6E-24 195.2 17.6 324 68-434 7-388 (396)
79 3mve_A FRSA, UPF0255 protein V 99.8 4.2E-19 1.4E-23 191.4 21.6 231 457-712 167-414 (415)
80 1jji_A Carboxylesterase; alpha 99.8 1.2E-19 4.1E-24 188.5 16.4 228 457-709 55-310 (311)
81 3iii_A COCE/NOND family hydrol 99.8 4.5E-19 1.5E-23 196.3 21.8 251 455-726 38-336 (560)
82 3d7r_A Esterase; alpha/beta fo 99.8 2.3E-19 7.8E-24 187.7 18.4 218 472-712 84-323 (326)
83 3og9_A Protein YAHD A copper i 99.8 1.7E-19 5.7E-24 175.7 16.2 184 489-710 14-208 (209)
84 1tht_A Thioesterase; 2.10A {Vi 99.8 1.6E-18 5.3E-23 179.1 24.0 236 458-712 7-266 (305)
85 3rm3_A MGLP, thermostable mono 99.8 3.9E-19 1.3E-23 180.2 18.7 207 492-711 40-269 (270)
86 4f0j_A Probable hydrolytic enz 99.8 1.4E-18 4.7E-23 179.8 22.9 233 457-709 19-313 (315)
87 1sfr_A Antigen 85-A; alpha/bet 99.8 6.3E-19 2.1E-23 182.3 20.0 244 457-713 8-285 (304)
88 3bdi_A Uncharacterized protein 99.8 3.1E-18 1E-22 165.9 23.5 195 459-709 5-206 (207)
89 3i2k_A Cocaine esterase; alpha 99.8 1.6E-19 5.4E-24 202.9 15.8 251 457-726 8-338 (587)
90 1ufo_A Hypothetical protein TT 99.8 2.8E-19 9.7E-24 177.1 15.8 203 491-712 23-236 (238)
91 1k8q_A Triacylglycerol lipase, 99.8 5.9E-19 2E-23 188.0 19.1 246 457-710 26-377 (377)
92 1r88_A MPT51/MPB51 antigen; AL 99.8 8.3E-19 2.8E-23 179.0 19.4 239 456-712 9-274 (280)
93 2gop_A Trilobed protease; beta 99.8 2.8E-18 9.5E-23 180.9 24.1 300 76-437 3-337 (347)
94 2z3z_A Dipeptidyl aminopeptida 99.8 6.5E-18 2.2E-22 196.2 28.1 308 89-437 26-398 (706)
95 4ezi_A Uncharacterized protein 99.8 8.8E-19 3E-23 185.0 18.6 251 454-715 39-374 (377)
96 2qjw_A Uncharacterized protein 99.8 7.2E-19 2.5E-23 165.9 15.3 173 490-709 2-175 (176)
97 1auo_A Carboxylesterase; hydro 99.8 2.6E-18 8.8E-23 168.0 19.4 190 489-712 11-218 (218)
98 3u0v_A Lysophospholipase-like 99.8 2.2E-18 7.4E-23 171.4 19.1 194 489-713 20-233 (239)
99 1xfd_A DIP, dipeptidyl aminope 99.8 1.7E-17 5.8E-22 193.2 28.7 310 91-430 63-443 (723)
100 3b5e_A MLL8374 protein; NP_108 99.8 6.1E-19 2.1E-23 173.5 13.6 199 468-712 14-218 (223)
101 2h1i_A Carboxylesterase; struc 99.8 5.3E-18 1.8E-22 167.0 20.1 184 490-711 36-226 (226)
102 4fle_A Esterase; structural ge 99.8 4E-19 1.4E-23 172.0 11.5 183 493-708 3-190 (202)
103 3d0k_A Putative poly(3-hydroxy 99.8 3E-18 1E-22 177.3 18.8 225 460-711 26-288 (304)
104 3cn9_A Carboxylesterase; alpha 99.8 9.2E-18 3.1E-22 165.4 21.4 182 489-711 21-226 (226)
105 2qm0_A BES; alpha-beta structu 99.8 1.2E-18 4E-23 177.5 14.4 231 453-707 13-272 (275)
106 1tqh_A Carboxylesterase precur 99.8 5E-18 1.7E-22 170.0 18.1 204 493-710 17-245 (247)
107 3pe7_A Oligogalacturonate lyas 99.8 2E-17 7E-22 177.1 23.3 256 148-437 41-336 (388)
108 2pl5_A Homoserine O-acetyltran 99.8 2E-17 7E-22 175.5 22.2 232 468-709 29-364 (366)
109 1dqz_A 85C, protein (antigen 8 99.8 8.6E-18 2.9E-22 171.6 18.6 242 457-712 5-279 (280)
110 2r8b_A AGR_C_4453P, uncharacte 99.8 1.3E-18 4.5E-23 174.5 12.3 183 490-712 60-249 (251)
111 3ia2_A Arylesterase; alpha-bet 99.8 9.3E-18 3.2E-22 170.2 17.9 216 463-708 3-270 (271)
112 2fx5_A Lipase; alpha-beta hydr 99.8 8.6E-18 2.9E-22 169.4 17.4 186 474-712 34-229 (258)
113 3d59_A Platelet-activating fac 99.8 4.7E-18 1.6E-22 181.9 16.0 193 489-714 95-353 (383)
114 1qlw_A Esterase; anisotropic r 99.8 1.4E-17 4.7E-22 174.2 18.4 199 472-712 50-322 (328)
115 2ocg_A Valacyclovir hydrolase; 99.8 4.5E-17 1.5E-21 163.5 20.7 215 468-707 10-253 (254)
116 3g8y_A SUSD/RAGB-associated es 99.8 6.4E-19 2.2E-23 188.9 7.4 210 457-684 86-341 (391)
117 3kxp_A Alpha-(N-acetylaminomet 99.7 3.4E-17 1.2E-21 169.9 20.2 219 459-709 49-314 (314)
118 2yys_A Proline iminopeptidase- 99.7 8.5E-17 2.9E-21 164.8 22.5 220 461-710 5-276 (286)
119 1imj_A CIB, CCG1-interacting f 99.7 4.7E-18 1.6E-22 165.2 12.2 190 468-709 15-208 (210)
120 1a88_A Chloroperoxidase L; hal 99.7 2.5E-17 8.7E-22 167.4 17.9 218 463-708 3-274 (275)
121 3nuz_A Putative acetyl xylan e 99.7 1.4E-18 4.9E-23 186.5 9.1 212 457-684 91-346 (398)
122 3azo_A Aminopeptidase; POP fam 99.7 8.9E-17 3E-21 185.2 24.5 253 147-437 26-332 (662)
123 1zoi_A Esterase; alpha/beta hy 99.7 1.6E-17 5.4E-22 169.1 16.2 218 463-708 4-275 (276)
124 2qru_A Uncharacterized protein 99.7 7.3E-17 2.5E-21 164.1 20.9 215 468-709 13-273 (274)
125 4dnp_A DAD2; alpha/beta hydrol 99.7 1.6E-17 5.6E-22 167.4 16.0 206 491-709 19-268 (269)
126 2ecf_A Dipeptidyl peptidase IV 99.7 1.6E-16 5.4E-21 185.6 26.6 259 149-437 43-422 (741)
127 2r11_A Carboxylesterase NP; 26 99.7 6.8E-17 2.3E-21 167.1 20.8 222 459-708 46-305 (306)
128 1gkl_A Endo-1,4-beta-xylanase 99.7 8.8E-17 3E-21 165.2 21.2 205 456-690 39-272 (297)
129 1a8q_A Bromoperoxidase A1; hal 99.7 8.9E-17 3E-21 163.2 20.6 217 463-708 3-273 (274)
130 3s25_A Hypothetical 7-bladed b 99.7 2.3E-16 7.7E-21 161.4 23.5 262 96-434 21-297 (302)
131 3oos_A Alpha/beta hydrolase fa 99.7 8.6E-17 2.9E-21 162.9 20.3 211 468-706 11-277 (278)
132 1a8s_A Chloroperoxidase F; hal 99.7 2.9E-17 9.9E-22 166.7 16.7 216 463-708 3-272 (273)
133 4f21_A Carboxylesterase/phosph 99.7 1.3E-16 4.4E-21 158.6 20.8 202 471-712 24-245 (246)
134 1brt_A Bromoperoxidase A2; hal 99.7 3.3E-17 1.1E-21 166.9 16.9 211 468-708 11-276 (277)
135 3om8_A Probable hydrolase; str 99.7 8.5E-17 2.9E-21 162.9 19.8 216 463-708 9-265 (266)
136 3v48_A Aminohydrolase, putativ 99.7 1.5E-16 5E-21 161.3 21.5 205 491-712 14-262 (268)
137 2y6u_A Peroxisomal membrane pr 99.7 2.5E-17 8.7E-22 177.1 16.5 238 463-712 25-346 (398)
138 2ojh_A Uncharacterized protein 99.7 2.6E-16 8.8E-21 160.8 22.7 233 163-437 20-265 (297)
139 3r0v_A Alpha/beta hydrolase fo 99.7 1.4E-16 4.8E-21 160.0 20.4 210 463-709 7-262 (262)
140 3qit_A CURM TE, polyketide syn 99.7 1.1E-16 3.8E-21 162.5 19.8 206 459-691 5-272 (286)
141 3dqz_A Alpha-hydroxynitrIle ly 99.7 8.1E-17 2.8E-21 161.5 18.1 204 493-711 5-258 (258)
142 3i28_A Epoxide hydrolase 2; ar 99.7 1.3E-16 4.4E-21 179.3 21.5 232 454-714 233-549 (555)
143 3nwo_A PIP, proline iminopepti 99.7 1.5E-16 5.3E-21 166.5 20.4 229 460-711 30-323 (330)
144 3c5m_A Oligogalacturonate lyas 99.7 1.2E-16 4E-21 171.4 19.7 251 147-437 40-336 (396)
145 3qvm_A OLEI00960; structural g 99.7 6.5E-17 2.2E-21 164.1 16.6 207 492-712 28-280 (282)
146 1mtz_A Proline iminopeptidase; 99.7 2.3E-16 7.9E-21 161.9 20.8 218 468-711 13-293 (293)
147 2qs9_A Retinoblastoma-binding 99.7 9E-17 3.1E-21 154.2 16.3 181 491-712 3-187 (194)
148 3i1i_A Homoserine O-acetyltran 99.7 7.3E-17 2.5E-21 171.7 17.2 220 490-712 40-374 (377)
149 3u1t_A DMMA haloalkane dehalog 99.7 1.6E-16 5.6E-21 163.6 19.2 218 468-714 17-300 (309)
150 2b61_A Homoserine O-acetyltran 99.7 3.5E-16 1.2E-20 166.8 21.6 232 468-709 42-376 (377)
151 3hss_A Putative bromoperoxidas 99.7 1.7E-16 6E-21 162.5 18.4 200 492-709 43-290 (293)
152 1q0r_A RDMC, aclacinomycin met 99.7 5.3E-16 1.8E-20 159.8 21.9 216 468-711 9-294 (298)
153 3sty_A Methylketone synthase 1 99.7 1.5E-16 5.1E-21 160.5 17.4 206 490-710 10-266 (267)
154 3vdx_A Designed 16NM tetrahedr 99.7 1.3E-16 4.5E-21 174.4 18.2 221 461-712 6-281 (456)
155 2xua_A PCAD, 3-oxoadipate ENOL 99.7 2.7E-16 9.2E-21 159.1 19.3 215 468-709 10-264 (266)
156 3fob_A Bromoperoxidase; struct 99.7 8.2E-16 2.8E-20 156.9 22.9 199 493-708 28-280 (281)
157 1c4x_A BPHD, protein (2-hydrox 99.7 2E-16 6.8E-21 161.8 17.9 217 468-709 15-284 (285)
158 3h2g_A Esterase; xanthomonas o 99.7 8.2E-17 2.8E-21 173.1 15.5 228 456-690 44-370 (397)
159 1uxo_A YDEN protein; hydrolase 99.7 1.6E-16 5.3E-21 152.2 15.7 181 492-712 4-188 (192)
160 2gop_A Trilobed protease; beta 99.7 1.7E-15 5.7E-20 159.5 24.5 231 153-434 23-295 (347)
161 4g9e_A AHL-lactonase, alpha/be 99.7 5.3E-17 1.8E-21 164.6 12.4 227 459-713 4-272 (279)
162 1hkh_A Gamma lactamase; hydrol 99.7 8.6E-17 2.9E-21 163.9 13.9 198 493-708 24-278 (279)
163 3o4h_A Acylamino-acid-releasin 99.7 2.6E-16 8.7E-21 178.4 19.2 245 90-393 66-320 (582)
164 3fsg_A Alpha/beta superfamily 99.7 1.1E-16 3.9E-21 161.5 14.3 203 492-712 21-270 (272)
165 1wm1_A Proline iminopeptidase; 99.7 1.8E-15 6.1E-20 157.1 23.7 224 459-708 15-316 (317)
166 2puj_A 2-hydroxy-6-OXO-6-pheny 99.7 1.6E-15 5.4E-20 155.2 22.8 202 493-709 34-285 (286)
167 2xdw_A Prolyl endopeptidase; a 99.7 3.9E-15 1.3E-19 172.8 27.6 265 150-437 79-376 (710)
168 1iup_A META-cleavage product h 99.7 1.5E-15 5.2E-20 155.1 21.2 216 468-710 13-273 (282)
169 1azw_A Proline iminopeptidase; 99.7 3.5E-15 1.2E-19 154.6 24.2 222 459-706 12-312 (313)
170 3e0x_A Lipase-esterase related 99.7 6.7E-16 2.3E-20 153.1 17.8 195 491-706 15-244 (245)
171 2ojh_A Uncharacterized protein 99.7 5.9E-15 2E-19 150.5 25.3 229 150-415 49-291 (297)
172 1j1i_A META cleavage compound 99.7 1.1E-15 3.7E-20 157.3 19.8 218 468-712 24-284 (296)
173 3guu_A Lipase A; protein struc 99.7 4E-15 1.4E-19 159.0 24.7 246 457-721 74-416 (462)
174 3c8d_A Enterochelin esterase; 99.7 1.1E-16 3.8E-21 171.4 12.6 225 456-712 166-399 (403)
175 2vat_A Acetyl-COA--deacetylcep 99.7 2.3E-16 7.7E-21 172.5 15.3 229 468-711 92-443 (444)
176 2e3j_A Epoxide hydrolase EPHB; 99.7 9.7E-16 3.3E-20 162.2 19.7 120 468-605 11-131 (356)
177 2bkl_A Prolyl endopeptidase; m 99.7 2.1E-15 7.2E-20 174.5 24.2 265 148-436 73-357 (695)
178 3g9x_A Haloalkane dehalogenase 99.7 7.9E-16 2.7E-20 157.8 18.0 215 468-710 18-293 (299)
179 3r40_A Fluoroacetate dehalogen 99.7 1.4E-15 4.8E-20 156.3 20.0 226 458-710 13-303 (306)
180 1wom_A RSBQ, sigma factor SIGB 99.7 5.4E-16 1.9E-20 157.3 16.3 204 493-711 21-271 (271)
181 1u2e_A 2-hydroxy-6-ketonona-2, 99.7 2.2E-15 7.6E-20 154.3 21.0 201 493-708 37-287 (289)
182 2wue_A 2-hydroxy-6-OXO-6-pheny 99.7 1.3E-15 4.3E-20 156.5 18.9 216 468-708 21-288 (291)
183 3s25_A Hypothetical 7-bladed b 99.7 1.2E-14 4.2E-19 148.5 23.9 238 147-437 18-262 (302)
184 1yr2_A Prolyl oligopeptidase; 99.7 1.2E-14 4E-19 169.5 26.8 265 149-437 113-402 (741)
185 3bwx_A Alpha/beta hydrolase; Y 99.7 1.7E-15 5.8E-20 154.8 16.9 223 458-709 5-284 (285)
186 3bdv_A Uncharacterized protein 99.6 3.4E-15 1.2E-19 142.7 17.9 171 491-712 16-189 (191)
187 3p2m_A Possible hydrolase; alp 99.6 7.2E-16 2.5E-20 161.3 14.2 198 493-709 82-329 (330)
188 2cjp_A Epoxide hydrolase; HET: 99.6 4.2E-15 1.4E-19 155.3 19.6 118 468-604 19-138 (328)
189 2xt0_A Haloalkane dehalogenase 99.6 3.5E-15 1.2E-19 153.6 18.5 213 470-708 33-296 (297)
190 2rau_A Putative esterase; NP_3 99.6 5.8E-16 2E-20 163.7 12.9 209 492-710 50-353 (354)
191 1b6g_A Haloalkane dehalogenase 99.6 1.8E-15 6E-20 156.9 15.9 214 470-709 34-308 (310)
192 1ycd_A Hypothetical 27.3 kDa p 99.6 6.9E-16 2.4E-20 153.8 12.3 208 491-712 4-239 (243)
193 2qvb_A Haloalkane dehalogenase 99.6 5.1E-15 1.8E-19 151.5 19.1 216 468-711 16-293 (297)
194 2wfl_A Polyneuridine-aldehyde 99.6 5E-15 1.7E-19 149.6 18.5 204 490-708 8-263 (264)
195 3bf7_A Esterase YBFF; thioeste 99.6 1.8E-15 6E-20 152.0 15.1 199 492-710 16-255 (255)
196 2gzs_A IROE protein; enterobac 99.6 2.2E-15 7.5E-20 153.2 15.8 225 455-710 10-265 (278)
197 3fla_A RIFR; alpha-beta hydrol 99.6 3.3E-15 1.1E-19 150.7 16.9 205 489-712 17-251 (267)
198 1xkl_A SABP2, salicylic acid-b 99.6 6.1E-15 2.1E-19 149.8 19.0 206 492-712 4-261 (273)
199 3kda_A CFTR inhibitory factor 99.6 6.6E-15 2.3E-19 151.2 19.1 212 468-711 18-295 (301)
200 1mj5_A 1,3,4,6-tetrachloro-1,4 99.6 9.1E-15 3.1E-19 150.2 20.0 218 468-713 17-296 (302)
201 3vgz_A Uncharacterized protein 99.6 1.5E-13 5.3E-18 144.4 29.5 283 89-416 41-334 (353)
202 2xmz_A Hydrolase, alpha/beta h 99.6 4.6E-15 1.6E-19 150.2 16.8 200 493-710 17-266 (269)
203 3c6x_A Hydroxynitrilase; atomi 99.6 7.2E-15 2.4E-19 147.8 16.8 202 493-709 4-255 (257)
204 1isp_A Lipase; alpha/beta hydr 99.6 1E-14 3.6E-19 138.0 17.0 168 492-710 3-176 (181)
205 3ibt_A 1H-3-hydroxy-4-oxoquino 99.6 8E-15 2.7E-19 147.5 16.8 213 468-708 7-263 (264)
206 1k32_A Tricorn protease; prote 99.6 8.3E-14 2.9E-18 168.7 28.9 267 89-416 204-491 (1045)
207 3afi_E Haloalkane dehalogenase 99.6 2.1E-14 7E-19 149.3 20.2 217 468-712 15-303 (316)
208 2q0x_A Protein DUF1749, unchar 99.6 6.1E-15 2.1E-19 154.4 15.8 198 491-711 37-295 (335)
209 2xe4_A Oligopeptidase B; hydro 99.6 4E-14 1.4E-18 164.6 24.1 257 151-437 123-415 (751)
210 1ehy_A Protein (soluble epoxid 99.6 1.3E-14 4.4E-19 149.1 17.0 214 468-707 17-293 (294)
211 1k32_A Tricorn protease; prote 99.6 1.7E-13 6E-18 165.9 29.7 295 91-437 247-607 (1045)
212 1pja_A Palmitoyl-protein thioe 99.6 4E-15 1.4E-19 153.4 12.1 201 490-707 34-301 (302)
213 1r3d_A Conserved hypothetical 99.6 1.6E-14 5.5E-19 145.8 16.3 198 492-711 16-263 (264)
214 2qmq_A Protein NDRG2, protein 99.6 3.5E-14 1.2E-18 144.9 18.1 219 468-708 19-285 (286)
215 1m33_A BIOH protein; alpha-bet 99.6 1E-14 3.4E-19 146.6 13.8 193 494-709 15-255 (258)
216 3l80_A Putative uncharacterize 99.6 4E-15 1.4E-19 152.3 10.6 200 492-710 41-289 (292)
217 3pic_A CIP2; alpha/beta hydrol 99.6 4.2E-14 1.4E-18 143.9 16.6 222 470-716 90-350 (375)
218 3iuj_A Prolyl endopeptidase; h 99.6 2.9E-13 1E-17 156.3 25.7 263 150-437 84-366 (693)
219 1l0q_A Surface layer protein; 99.6 8E-13 2.7E-17 141.3 26.5 239 150-433 39-278 (391)
220 3scy_A Hypothetical bacterial 99.5 1.5E-12 5.1E-17 137.7 27.7 272 89-395 50-347 (361)
221 2psd_A Renilla-luciferin 2-mon 99.5 3.1E-13 1.1E-17 140.4 21.3 216 468-712 29-307 (318)
222 3u4y_A Uncharacterized protein 99.5 2.1E-12 7.1E-17 134.6 27.1 241 149-432 46-306 (331)
223 1qe3_A PNB esterase, para-nitr 99.5 4.3E-15 1.5E-19 162.7 5.5 215 470-692 81-316 (489)
224 3hfq_A Uncharacterized protein 99.5 8.8E-13 3E-17 138.6 23.0 257 150-437 47-326 (347)
225 4g4g_A 4-O-methyl-glucuronoyl 99.5 2E-13 6.9E-18 140.2 17.3 221 471-717 124-385 (433)
226 3gff_A IROE-like serine hydrol 99.5 3.2E-14 1.1E-18 147.5 11.2 224 457-712 11-267 (331)
227 3bws_A Protein LP49; two-domai 99.5 6.8E-12 2.3E-16 136.0 28.8 293 89-429 123-431 (433)
228 4fol_A FGH, S-formylglutathion 99.5 4.8E-13 1.6E-17 136.2 18.0 247 458-712 14-297 (299)
229 2wj6_A 1H-3-hydroxy-4-oxoquina 99.5 1.3E-13 4.6E-18 140.0 14.0 215 468-710 12-272 (276)
230 3b12_A Fluoroacetate dehalogen 99.2 2.1E-15 7.1E-20 154.9 0.0 206 492-712 25-294 (304)
231 3qmv_A Thioesterase, REDJ; alp 99.5 6E-14 2.1E-18 142.9 10.6 197 492-706 51-279 (280)
232 1l0q_A Surface layer protein; 99.5 5E-12 1.7E-16 135.0 25.9 232 156-433 3-236 (391)
233 4i19_A Epoxide hydrolase; stru 99.4 4.3E-12 1.5E-16 135.2 20.5 125 459-604 69-203 (388)
234 1ri6_A Putative isomerase YBHE 99.4 7.7E-12 2.6E-16 130.6 22.1 258 149-437 44-317 (343)
235 3qyj_A ALR0039 protein; alpha/ 99.4 7.6E-12 2.6E-16 128.1 21.4 224 459-709 6-290 (291)
236 1pby_B Quinohemoprotein amine 99.4 3.1E-11 1.1E-15 125.6 25.6 246 149-433 40-313 (337)
237 3u4y_A Uncharacterized protein 99.4 5.8E-11 2E-15 123.6 27.2 240 152-437 7-259 (331)
238 3c5v_A PME-1, protein phosphat 99.4 7.6E-12 2.6E-16 129.8 20.0 201 492-710 38-300 (316)
239 3lcr_A Tautomycetin biosynthet 99.4 4.2E-12 1.5E-16 131.7 17.2 206 491-712 80-304 (319)
240 1ri6_A Putative isomerase YBHE 99.4 3.4E-11 1.2E-15 125.6 23.1 264 89-394 38-317 (343)
241 3bws_A Protein LP49; two-domai 99.4 7.3E-11 2.5E-15 127.9 26.2 240 154-433 133-393 (433)
242 3vgz_A Uncharacterized protein 99.4 9.9E-11 3.4E-15 122.8 26.0 239 153-433 51-306 (353)
243 3hfq_A Uncharacterized protein 99.4 5.9E-11 2E-15 124.5 24.1 270 89-395 40-327 (347)
244 2d81_A PHB depolymerase; alpha 99.4 5.2E-13 1.8E-17 136.7 7.6 143 565-712 5-177 (318)
245 1pby_B Quinohemoprotein amine 99.3 7.3E-11 2.5E-15 122.8 22.4 233 157-433 3-272 (337)
246 3scy_A Hypothetical bacterial 99.3 1.1E-10 3.6E-15 123.4 22.5 287 111-436 25-345 (361)
247 3ds8_A LIN2722 protein; unkonw 99.3 2.9E-12 9.9E-17 128.3 9.7 210 493-712 4-244 (254)
248 3ow8_A WD repeat-containing pr 99.3 8E-10 2.7E-14 114.7 27.7 267 89-416 33-310 (321)
249 1kez_A Erythronolide synthase; 99.3 7.1E-12 2.4E-16 128.9 11.9 200 490-712 65-283 (300)
250 1gxr_A ESG1, transducin-like e 99.3 1.1E-09 3.9E-14 113.5 27.5 240 147-433 54-299 (337)
251 1jmx_B Amine dehydrogenase; ox 99.3 2.6E-10 8.7E-15 119.3 22.5 159 155-338 11-182 (349)
252 3g4e_A Regucalcin; six bladed 99.3 2.2E-10 7.4E-15 117.6 21.1 243 90-376 14-264 (297)
253 3e5z_A Putative gluconolactona 99.3 2.5E-10 8.7E-15 116.9 21.5 256 84-392 23-291 (296)
254 3zwl_B Eukaryotic translation 99.3 2.5E-09 8.5E-14 112.4 29.2 287 88-432 32-348 (369)
255 1gxr_A ESG1, transducin-like e 99.3 3.9E-09 1.4E-13 109.4 30.1 269 88-416 51-326 (337)
256 1ukc_A ESTA, esterase; fungi, 99.3 1.1E-11 3.7E-16 136.8 10.3 215 472-691 86-327 (522)
257 3fle_A SE_1780 protein; struct 99.2 7.2E-11 2.5E-15 116.8 15.0 209 492-707 6-247 (249)
258 4gqb_B Methylosome protein 50; 99.2 1.2E-09 4.2E-14 114.4 24.8 243 145-430 83-331 (344)
259 3g02_A Epoxide hydrolase; alph 99.2 1.8E-10 6.2E-15 123.0 17.9 227 459-712 86-398 (408)
260 3lp5_A Putative cell surface h 99.2 1.7E-10 5.9E-15 114.0 16.3 197 494-709 6-233 (250)
261 3ils_A PKS, aflatoxin biosynth 99.2 4E-11 1.4E-15 120.8 11.6 198 491-707 20-264 (265)
262 4g56_B MGC81050 protein; prote 99.2 7.4E-10 2.5E-14 116.8 21.9 243 145-430 95-343 (357)
263 2ghs_A AGR_C_1268P; regucalcin 99.2 1.4E-09 4.7E-14 113.1 22.4 221 81-338 40-267 (326)
264 2ymu_A WD-40 repeat protein; u 99.2 1.3E-08 4.5E-13 114.5 30.9 223 156-430 316-539 (577)
265 3dr2_A Exported gluconolactona 99.2 1.5E-09 5E-14 111.8 21.0 256 81-385 37-304 (305)
266 4h5i_A Guanine nucleotide-exch 99.2 1E-08 3.4E-13 108.5 27.8 199 193-430 136-343 (365)
267 2k2q_B Surfactin synthetase th 99.1 8.7E-11 3E-15 116.5 9.8 196 491-709 12-236 (242)
268 2ymu_A WD-40 repeat protein; u 99.1 1E-08 3.5E-13 115.4 28.0 211 157-416 358-569 (577)
269 3vl1_A 26S proteasome regulato 99.1 1.3E-08 4.6E-13 109.3 27.3 279 92-431 60-366 (420)
270 1jof_A Carboxy-CIS,CIS-muconat 99.1 3.5E-09 1.2E-13 112.0 22.1 167 151-334 48-229 (365)
271 1ei9_A Palmitoyl protein thioe 99.1 5.5E-10 1.9E-14 113.0 14.8 103 494-603 7-114 (279)
272 2dg1_A DRP35, lactonase; beta 99.1 2.3E-08 7.9E-13 103.9 27.4 260 89-387 45-316 (333)
273 2vdu_B TRNA (guanine-N(7)-)-me 99.1 5.3E-09 1.8E-13 114.0 23.2 250 149-433 107-396 (450)
274 4ery_A WD repeat-containing pr 99.1 5.6E-08 1.9E-12 99.9 29.3 269 89-415 24-298 (312)
275 4aez_A CDC20, WD repeat-contai 99.1 8.7E-08 3E-12 102.5 31.0 277 92-433 97-383 (401)
276 1tca_A Lipase; hydrolase(carbo 99.1 1.2E-09 4E-14 112.6 15.4 210 471-709 15-243 (317)
277 3zwl_B Eukaryotic translation 99.1 3.9E-08 1.3E-12 103.2 27.1 229 148-415 36-278 (369)
278 1jmx_B Amine dehydrogenase; ox 99.1 4.5E-09 1.5E-13 109.7 19.6 120 150-283 50-178 (349)
279 3i2n_A WD repeat-containing pr 99.1 1.7E-08 5.7E-13 105.7 23.7 242 89-385 19-291 (357)
280 2aq5_A Coronin-1A; WD40 repeat 99.1 8.9E-09 3E-13 110.3 21.8 244 147-437 84-349 (402)
281 4gqb_B Methylosome protein 50; 99.1 9E-09 3.1E-13 107.8 20.7 241 90-384 84-330 (344)
282 3ow8_A WD repeat-containing pr 99.1 2.4E-08 8.3E-13 103.4 23.9 233 90-382 82-318 (321)
283 3fm0_A Protein CIAO1; WDR39,SG 99.0 1.1E-07 3.7E-12 99.5 28.8 195 90-327 18-223 (345)
284 1gpl_A RP2 lipase; serine este 99.0 2E-10 6.7E-15 123.7 7.0 161 491-689 69-235 (432)
285 4e54_B DNA damage-binding prot 99.0 1.4E-08 4.9E-13 110.0 21.7 290 90-434 121-434 (435)
286 2h7c_A Liver carboxylesterase 99.0 1.5E-10 5.1E-15 128.4 5.9 128 468-606 97-233 (542)
287 2ogt_A Thermostable carboxyles 99.0 2.9E-10 1E-14 124.6 8.2 131 468-606 83-224 (498)
288 3vl1_A 26S proteasome regulato 99.0 3.5E-08 1.2E-12 106.0 24.4 242 148-432 62-324 (420)
289 1nir_A Nitrite reductase; hemo 99.0 5.5E-08 1.9E-12 108.3 26.6 242 150-433 186-461 (543)
290 1nir_A Nitrite reductase; hemo 99.0 5E-08 1.7E-12 108.7 25.9 295 91-433 181-517 (543)
291 3ei3_B DNA damage-binding prot 99.0 2E-07 7E-12 98.8 29.7 205 89-333 74-284 (383)
292 1nr0_A Actin interacting prote 99.0 1.2E-07 4E-12 107.7 29.5 202 90-337 20-227 (611)
293 2ynn_A Coatomer subunit beta'; 99.0 9.6E-08 3.3E-12 97.9 26.0 230 156-433 26-262 (304)
294 1jof_A Carboxy-CIS,CIS-muconat 99.0 2.5E-08 8.6E-13 105.3 22.1 175 193-390 42-229 (365)
295 1llf_A Lipase 3; candida cylin 99.0 2.3E-10 7.8E-15 126.4 6.0 127 471-604 97-243 (534)
296 4ery_A WD repeat-containing pr 99.0 9E-08 3.1E-12 98.4 25.2 227 156-433 36-271 (312)
297 1k8k_C P40, ARP2/3 complex 41 99.0 7.8E-08 2.7E-12 101.2 25.0 236 89-385 9-274 (372)
298 4g56_B MGC81050 protein; prote 99.0 1.2E-08 3.9E-13 107.6 18.4 250 90-393 96-351 (357)
299 3e5z_A Putative gluconolactona 99.0 7.9E-08 2.7E-12 98.1 23.9 237 148-434 33-290 (296)
300 2aq5_A Coronin-1A; WD40 repeat 99.0 3.7E-07 1.3E-11 97.5 30.2 240 149-432 39-301 (402)
301 1erj_A Transcriptional repress 99.0 4.5E-07 1.5E-11 96.7 30.5 220 149-416 128-378 (393)
302 1thg_A Lipase; hydrolase(carbo 99.0 1.6E-10 5.3E-15 128.0 3.3 126 472-604 106-251 (544)
303 2mad_H Methylamine dehydrogena 99.0 8.7E-07 3E-11 93.5 31.8 252 147-433 70-353 (373)
304 1vyh_C Platelet-activating fac 99.0 3.7E-07 1.3E-11 98.0 29.2 265 90-416 110-400 (410)
305 1vyh_C Platelet-activating fac 99.0 1.4E-07 4.8E-12 101.3 25.8 247 148-432 112-371 (410)
306 2ghs_A AGR_C_1268P; regucalcin 98.9 1.2E-07 4.1E-12 98.4 24.1 224 149-417 55-293 (326)
307 3g4e_A Regucalcin; six bladed 98.9 1.7E-07 5.7E-12 95.9 24.8 226 149-417 19-263 (297)
308 1r5m_A SIR4-interacting protei 98.9 1.1E-07 3.6E-12 102.0 23.9 285 89-432 46-363 (425)
309 3frx_A Guanine nucleotide-bind 98.9 2.6E-07 8.8E-12 95.5 25.8 207 89-338 18-234 (319)
310 2pm9_A Protein WEB1, protein t 98.9 2.2E-08 7.4E-13 107.4 18.2 290 90-432 14-339 (416)
311 2cb9_A Fengycin synthetase; th 98.9 6.6E-09 2.3E-13 103.0 13.0 191 492-712 22-227 (244)
312 1sq9_A Antiviral protein SKI8; 98.9 1.9E-07 6.6E-12 99.3 25.0 239 147-433 19-325 (397)
313 1sq9_A Antiviral protein SKI8; 98.9 3.5E-07 1.2E-11 97.2 26.7 212 90-338 18-274 (397)
314 1jmk_C SRFTE, surfactin synthe 98.9 3.5E-09 1.2E-13 103.9 9.9 185 492-707 17-226 (230)
315 3dsm_A Uncharacterized protein 98.9 2.6E-07 8.8E-12 95.9 24.6 236 149-432 48-303 (328)
316 1yfq_A Cell cycle arrest prote 98.9 1.6E-07 5.3E-12 97.6 23.0 274 89-417 12-313 (342)
317 1k8k_C P40, ARP2/3 complex 41 98.9 2.4E-07 8.1E-12 97.4 24.6 233 148-430 12-274 (372)
318 2ynn_A Coatomer subunit beta'; 98.9 5.5E-07 1.9E-11 92.2 26.6 254 89-403 14-276 (304)
319 1got_B GT-beta; complex (GTP-b 98.9 4.6E-07 1.6E-11 94.5 26.5 270 89-416 56-332 (340)
320 3mkq_A Coatomer beta'-subunit; 98.9 1.5E-07 5.1E-12 110.6 25.3 254 89-403 14-276 (814)
321 4h5i_A Guanine nucleotide-exch 98.9 4.7E-08 1.6E-12 103.3 18.8 197 149-386 140-344 (365)
322 2pm9_A Protein WEB1, protein t 98.9 2.3E-08 8E-13 107.1 16.5 247 150-433 20-297 (416)
323 3mkq_A Coatomer beta'-subunit; 98.9 1.1E-07 3.8E-12 111.7 23.6 232 154-433 25-262 (814)
324 1npe_A Nidogen, entactin; glyc 98.9 3.3E-07 1.1E-11 92.0 23.8 235 156-433 3-241 (267)
325 4aez_A CDC20, WD repeat-contai 98.9 5.2E-07 1.8E-11 96.4 26.6 238 147-433 96-339 (401)
326 2ha2_A ACHE, acetylcholinester 98.9 1.2E-09 4.3E-14 121.0 6.0 128 468-604 95-231 (543)
327 3sjl_D Methylamine dehydrogena 98.9 2.4E-07 8.2E-12 96.9 22.9 257 152-433 42-366 (386)
328 3fm0_A Protein CIAO1; WDR39,SG 98.9 4.3E-07 1.5E-11 94.9 25.0 187 156-385 29-225 (345)
329 2vdu_B TRNA (guanine-N(7)-)-me 98.9 1.7E-07 5.7E-12 102.1 22.4 253 90-391 104-397 (450)
330 1nr0_A Actin interacting prote 98.8 5.5E-07 1.9E-11 102.1 27.1 234 149-432 25-272 (611)
331 2hes_X YDR267CP; beta-propelle 98.8 9.5E-07 3.3E-11 91.6 26.5 200 147-384 17-229 (330)
332 2hfk_A Pikromycin, type I poly 98.8 7.6E-09 2.6E-13 107.1 10.4 207 494-712 91-313 (319)
333 1r5m_A SIR4-interacting protei 98.8 3.3E-07 1.1E-11 98.0 23.7 238 147-433 48-322 (425)
334 3i2n_A WD repeat-containing pr 98.8 5.2E-07 1.8E-11 94.1 24.4 208 89-328 66-290 (357)
335 1got_B GT-beta; complex (GTP-b 98.8 9.7E-07 3.3E-11 92.0 26.2 225 156-432 68-303 (340)
336 1bu8_A Protein (pancreatic lip 98.8 4.3E-09 1.5E-13 113.6 8.3 111 490-605 68-181 (452)
337 2dg1_A DRP35, lactonase; beta 98.8 8.3E-07 2.8E-11 92.0 25.4 243 156-430 57-316 (333)
338 2oiz_A Aromatic amine dehydrog 98.8 8E-07 2.7E-11 93.5 25.5 105 164-283 30-143 (361)
339 2fj0_A JuvenIle hormone estera 98.8 1.1E-09 3.8E-14 121.5 3.4 110 492-604 115-232 (551)
340 1erj_A Transcriptional repress 98.8 3.8E-07 1.3E-11 97.3 22.8 195 192-431 66-288 (393)
341 3tej_A Enterobactin synthase c 98.8 2.6E-08 8.9E-13 103.5 13.1 196 492-707 101-327 (329)
342 1pgu_A Actin interacting prote 98.8 9.2E-07 3.2E-11 99.9 27.1 285 90-432 20-330 (615)
343 2pbi_B Guanine nucleotide-bind 98.8 3.6E-06 1.2E-10 88.3 29.7 269 88-416 64-346 (354)
344 1p0i_A Cholinesterase; serine 98.8 2.1E-09 7.2E-14 118.8 5.0 126 472-605 93-227 (529)
345 1w52_X Pancreatic lipase relat 98.8 7.3E-09 2.5E-13 111.8 8.8 110 491-605 69-181 (452)
346 1ea5_A ACHE, acetylcholinester 98.8 2E-09 6.7E-14 119.1 4.2 128 468-605 93-229 (537)
347 4gga_A P55CDC, cell division c 98.8 9.1E-07 3.1E-11 95.2 25.1 241 147-431 108-396 (420)
348 2xzm_R RACK1; ribosome, transl 98.8 2.2E-06 7.6E-11 89.3 27.3 148 148-329 80-242 (343)
349 3dw8_B Serine/threonine-protei 98.8 1.1E-06 3.7E-11 95.0 25.7 171 191-394 178-380 (447)
350 3dm0_A Maltose-binding peripla 98.8 1.2E-06 4.1E-11 101.0 27.3 242 91-390 385-635 (694)
351 3tjm_A Fatty acid synthase; th 98.8 3.1E-08 1.1E-12 100.6 12.0 94 492-605 24-124 (283)
352 3c75_H MADH, methylamine dehyd 98.8 1.7E-06 6E-11 92.0 25.8 255 154-433 84-405 (426)
353 3dwl_C Actin-related protein 2 98.8 8.3E-08 2.8E-12 101.4 15.4 216 157-415 25-270 (377)
354 1ex9_A Lactonizing lipase; alp 98.8 1.8E-08 6.3E-13 102.2 9.8 101 490-605 5-109 (285)
355 3k26_A Polycomb protein EED; W 98.8 9.5E-07 3.2E-11 92.4 23.3 160 89-281 19-193 (366)
356 2xyi_A Probable histone-bindin 98.7 7.9E-07 2.7E-11 96.1 23.1 250 88-384 128-409 (430)
357 1ys1_X Lipase; CIS peptide Leu 98.7 2.6E-08 8.9E-13 102.5 10.7 104 490-605 6-114 (320)
358 1pgu_A Actin interacting prote 98.7 5.7E-07 1.9E-11 101.6 22.9 202 191-433 19-241 (615)
359 1dx4_A ACHE, acetylcholinester 98.7 1.3E-08 4.4E-13 113.7 8.8 117 489-605 138-267 (585)
360 3v64_C Agrin; beta propeller, 98.7 6E-07 2.1E-11 93.9 20.9 203 89-333 73-277 (349)
361 3sov_A LRP-6, low-density lipo 98.7 3.6E-07 1.2E-11 94.1 18.8 204 90-334 36-241 (318)
362 3v65_B Low-density lipoprotein 98.7 2.4E-06 8.2E-11 90.7 25.6 229 156-432 89-320 (386)
363 3dr2_A Exported gluconolactona 98.7 2.5E-07 8.4E-12 95.0 17.4 214 177-433 35-270 (305)
364 3icv_A Lipase B, CALB; circula 98.7 5.3E-08 1.8E-12 98.5 11.9 102 491-606 64-170 (316)
365 1qks_A Cytochrome CD1 nitrite 98.7 2E-06 7E-11 95.6 25.7 88 156-260 168-263 (567)
366 3v64_C Agrin; beta propeller, 98.7 3.7E-06 1.3E-10 87.8 26.3 229 156-432 46-277 (349)
367 3sfz_A APAF-1, apoptotic pepti 98.7 1.1E-07 3.7E-12 117.5 16.8 278 90-427 963-1246(1249)
368 3jrp_A Fusion protein of prote 98.7 1.3E-06 4.3E-11 91.9 22.9 229 157-429 25-286 (379)
369 2pbi_B Guanine nucleotide-bind 98.7 3.7E-06 1.3E-10 88.1 26.3 233 149-432 69-317 (354)
370 3dwl_C Actin-related protein 2 98.7 1.8E-07 6E-12 98.9 16.2 199 90-334 13-239 (377)
371 3v65_B Low-density lipoprotein 98.7 4.7E-07 1.6E-11 96.1 19.3 204 88-333 115-320 (386)
372 1npe_A Nidogen, entactin; glyc 98.7 1.2E-06 4.3E-11 87.7 21.5 199 153-394 46-246 (267)
373 3ei3_B DNA damage-binding prot 98.7 9E-07 3.1E-11 93.7 21.3 201 191-433 74-285 (383)
374 2bce_A Cholesterol esterase; h 98.7 3.9E-09 1.3E-13 117.3 2.8 129 468-604 79-222 (579)
375 1yfq_A Cell cycle arrest prote 98.7 2.7E-07 9.2E-12 95.8 16.8 224 157-433 25-285 (342)
376 4aow_A Guanine nucleotide-bind 98.7 7.8E-06 2.7E-10 84.5 27.8 285 89-432 39-339 (340)
377 1ijq_A LDL receptor, low-densi 98.7 6.6E-06 2.3E-10 84.7 26.7 228 157-432 4-240 (316)
378 3jrp_A Fusion protein of prote 98.7 3.5E-06 1.2E-10 88.5 25.3 243 89-385 12-287 (379)
379 2xyi_A Probable histone-bindin 98.7 1.1E-06 3.6E-11 95.0 21.4 199 146-384 130-352 (430)
380 4a11_B DNA excision repair pro 98.7 2.4E-06 8.1E-11 90.8 23.5 157 147-332 46-219 (408)
381 2pm7_B Protein transport prote 98.7 2E-05 6.9E-10 80.1 29.5 250 90-393 11-292 (297)
382 1ijq_A LDL receptor, low-densi 98.7 1.4E-06 4.9E-11 89.7 20.8 206 89-333 30-240 (316)
383 1hpl_A Lipase; hydrolase(carbo 98.7 3E-08 1E-12 106.3 8.3 111 490-605 67-180 (449)
384 2xzm_R RACK1; ribosome, transl 98.7 5E-06 1.7E-10 86.6 25.0 227 155-433 39-288 (343)
385 1rp1_A Pancreatic lipase relat 98.7 3.2E-08 1.1E-12 106.1 8.2 110 490-605 68-180 (450)
386 3frx_A Guanine nucleotide-bind 98.7 8.3E-06 2.8E-10 84.0 26.4 241 90-384 67-316 (319)
387 4e54_B DNA damage-binding prot 98.6 2.8E-06 9.6E-11 91.8 23.5 212 89-337 165-393 (435)
388 2mad_H Methylamine dehydrogena 98.6 1.5E-05 5E-10 84.1 28.0 259 89-393 67-356 (373)
389 3iz6_a 40S ribosomal protein R 98.6 1.1E-05 3.9E-10 85.2 27.4 286 89-431 67-376 (380)
390 2hes_X YDR267CP; beta-propelle 98.6 2.3E-05 7.8E-10 81.1 29.1 152 148-328 62-229 (330)
391 3p5b_L Low density lipoprotein 98.6 7.5E-06 2.6E-10 87.2 25.5 229 156-432 85-322 (400)
392 4ggc_A P55CDC, cell division c 98.6 9E-06 3.1E-10 83.1 25.2 239 148-430 29-315 (318)
393 2x5x_A PHB depolymerase PHAZ7; 98.6 7E-08 2.4E-12 99.7 9.0 108 493-606 41-166 (342)
394 3sov_A LRP-6, low-density lipo 98.6 7.1E-06 2.4E-10 84.3 23.9 229 157-433 7-241 (318)
395 3dm0_A Maltose-binding peripla 98.6 1.5E-06 5.3E-11 100.0 20.8 231 155-433 395-635 (694)
396 3sfz_A APAF-1, apoptotic pepti 98.6 5.5E-06 1.9E-10 102.2 26.8 243 149-432 620-873 (1249)
397 1qks_A Cytochrome CD1 nitrite 98.6 1.9E-05 6.6E-10 87.8 27.9 244 153-433 254-541 (567)
398 2pm7_B Protein transport prote 98.6 3.4E-05 1.2E-09 78.4 27.9 230 156-427 22-284 (297)
399 3f3f_A Nucleoporin SEH1; struc 98.6 6.9E-06 2.3E-10 84.7 22.8 196 149-385 16-249 (351)
400 2j04_A TAU60, YPL007P, hypothe 98.6 1.2E-06 4.2E-11 95.2 17.0 187 191-426 86-295 (588)
401 3bix_A Neuroligin-1, neuroligi 98.6 3.1E-08 1E-12 110.4 4.6 127 471-603 111-247 (574)
402 3p5b_L Low density lipoprotein 98.5 1.4E-05 4.8E-10 85.1 25.1 163 150-339 119-285 (400)
403 3lrv_A PRE-mRNA-splicing facto 98.5 1.5E-05 5E-10 83.0 24.9 189 164-391 103-298 (343)
404 3k26_A Polycomb protein EED; W 98.5 4.8E-06 1.6E-10 86.9 20.8 151 155-333 34-194 (366)
405 3dw8_B Serine/threonine-protei 98.5 2.5E-06 8.5E-11 92.2 19.1 148 156-334 41-261 (447)
406 3f3f_A Nucleoporin SEH1; struc 98.5 1.3E-05 4.3E-10 82.7 23.8 200 89-328 12-248 (351)
407 3hrp_A Uncharacterized protein 98.5 2.7E-05 9.1E-10 83.2 26.2 205 154-394 141-361 (409)
408 2zyr_A Lipase, putative; fatty 98.5 1.9E-07 6.4E-12 99.6 8.7 172 491-710 21-230 (484)
409 3odt_A Protein DOA1; ubiquitin 98.5 9.2E-06 3.2E-10 82.7 21.4 235 89-389 60-298 (313)
410 2j04_A TAU60, YPL007P, hypothe 98.5 8.7E-06 3E-10 88.6 21.8 187 149-384 92-296 (588)
411 3hrp_A Uncharacterized protein 98.5 1.7E-05 5.6E-10 84.9 23.8 206 193-433 133-357 (409)
412 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 9.6E-06 3.3E-10 82.9 21.3 260 89-387 18-299 (314)
413 3v7d_B Cell division control p 98.5 8.8E-05 3E-09 80.5 30.0 276 89-427 163-462 (464)
414 4aow_A Guanine nucleotide-bind 98.5 7.8E-05 2.7E-09 76.8 27.5 235 147-432 41-288 (340)
415 3dsm_A Uncharacterized protein 98.5 6.2E-05 2.1E-09 77.7 26.5 226 164-433 16-256 (328)
416 3m0c_C LDL receptor, low-densi 98.4 3.4E-05 1.2E-09 88.8 26.5 229 156-432 397-634 (791)
417 1q7f_A NHL, brain tumor CG1071 98.4 2.3E-05 8E-10 79.0 22.5 243 90-383 31-278 (286)
418 2ece_A 462AA long hypothetical 98.4 2.7E-05 9.3E-10 82.0 23.0 156 152-316 93-271 (462)
419 3iz6_a 40S ribosomal protein R 98.4 6.3E-06 2.2E-10 87.3 18.3 228 156-433 79-332 (380)
420 3gre_A Serine/threonine-protei 98.4 3.4E-05 1.2E-09 83.0 24.5 256 89-389 64-361 (437)
421 3vu4_A KMHSV2; beta-propeller 98.4 1.3E-05 4.5E-10 83.9 20.4 94 221-332 159-272 (355)
422 3no2_A Uncharacterized protein 98.4 7.2E-05 2.5E-09 75.1 24.7 232 154-428 4-251 (276)
423 3jro_A Fusion protein of prote 98.4 5.3E-06 1.8E-10 96.5 18.6 228 157-430 23-285 (753)
424 3n2z_B Lysosomal Pro-X carboxy 98.4 7.8E-07 2.7E-11 95.1 10.3 111 492-604 39-160 (446)
425 3vu4_A KMHSV2; beta-propeller 98.4 1.5E-05 5.3E-10 83.4 20.2 154 151-329 144-336 (355)
426 3sjl_D Methylamine dehydrogena 98.4 1.9E-05 6.4E-10 82.6 20.4 134 197-338 39-176 (386)
427 3mmy_A MRNA export factor; mRN 98.4 2.6E-05 8.9E-10 81.2 21.8 115 147-283 42-163 (368)
428 2fp8_A Strictosidine synthase; 98.4 2.1E-05 7.3E-10 81.0 20.7 227 89-338 19-276 (322)
429 4a0p_A LRP6, LRP-6, low-densit 98.4 7.7E-05 2.6E-09 84.0 26.8 230 156-432 8-239 (628)
430 4a11_B DNA excision repair pro 98.4 4.1E-05 1.4E-09 81.1 23.6 240 89-384 100-364 (408)
431 3v7d_B Cell division control p 98.4 9.7E-05 3.3E-09 80.1 27.0 232 147-433 165-424 (464)
432 1mda_H Methylamine dehydrogena 98.4 1.7E-05 5.9E-10 82.8 19.8 97 156-260 33-143 (368)
433 1rwi_B Serine/threonine-protei 98.4 3.7E-05 1.3E-09 76.6 21.5 226 156-431 36-265 (270)
434 3odt_A Protein DOA1; ubiquitin 98.4 0.00011 3.7E-09 74.6 25.4 272 89-433 19-299 (313)
435 3bg1_A Protein SEC13 homolog; 98.4 2.3E-05 7.8E-10 80.5 20.1 228 156-427 26-292 (316)
436 2qe8_A Uncharacterized protein 98.4 1.7E-05 5.7E-10 82.7 19.3 221 89-338 17-285 (343)
437 2p4o_A Hypothetical protein; p 98.3 2.4E-05 8E-10 80.1 19.9 202 89-337 32-247 (306)
438 3gre_A Serine/threonine-protei 98.3 4.6E-05 1.6E-09 82.0 23.3 240 148-433 67-362 (437)
439 3m0c_C LDL receptor, low-densi 98.3 1.7E-05 5.8E-10 91.3 20.6 206 89-334 424-635 (791)
440 3lrv_A PRE-mRNA-splicing facto 98.3 2.3E-05 7.7E-10 81.6 20.1 147 156-330 140-293 (343)
441 4a0p_A LRP6, LRP-6, low-densit 98.3 2.3E-05 7.8E-10 88.3 21.2 202 90-334 38-240 (628)
442 1n7d_A LDL receptor, low-densi 98.3 2.6E-06 9E-11 97.4 13.8 211 88-338 405-621 (699)
443 2oiz_A Aromatic amine dehydrog 98.3 0.00017 5.7E-09 75.6 26.3 131 200-336 13-145 (361)
444 2oaj_A Protein SNI1; WD40 repe 98.3 3.4E-05 1.2E-09 91.3 22.9 205 148-391 21-246 (902)
445 4gga_A P55CDC, cell division c 98.3 0.00014 4.7E-09 77.9 25.1 237 90-383 149-393 (420)
446 2iwa_A Glutamine cyclotransfer 98.3 4.7E-05 1.6E-09 75.2 19.2 200 90-331 22-237 (266)
447 3c75_H MADH, methylamine dehyd 98.3 3.4E-05 1.1E-09 82.1 19.4 209 89-336 177-407 (426)
448 3jro_A Fusion protein of prote 98.3 5.1E-05 1.7E-09 88.1 22.2 210 191-432 10-240 (753)
449 2dst_A Hypothetical protein TT 98.2 3.6E-06 1.2E-10 74.1 9.5 93 468-593 10-103 (131)
450 3s94_A LRP-6, low-density lipo 98.2 3.3E-05 1.1E-09 86.9 19.7 205 89-334 40-246 (619)
451 3bg1_A Protein SEC13 homolog; 98.2 1.4E-05 4.9E-10 82.0 15.4 248 89-393 14-300 (316)
452 2fp8_A Strictosidine synthase; 98.2 0.00031 1E-08 72.2 25.5 236 156-431 31-314 (322)
453 1rwi_B Serine/threonine-protei 98.2 0.0001 3.4E-09 73.4 21.1 200 90-336 25-227 (270)
454 2z2n_A Virginiamycin B lyase; 98.2 0.00096 3.3E-08 67.0 28.6 277 90-432 16-297 (299)
455 3nol_A Glutamine cyclotransfer 98.2 6.5E-05 2.2E-09 73.3 18.5 197 151-385 49-254 (262)
456 1n7d_A LDL receptor, low-densi 98.2 7.9E-06 2.7E-10 93.5 13.5 223 165-433 386-617 (699)
457 2dsn_A Thermostable lipase; T1 98.2 7.6E-06 2.6E-10 85.6 11.9 98 493-604 7-163 (387)
458 3sre_A PON1, serum paraoxonase 98.2 2.3E-05 7.8E-10 81.0 15.2 155 156-330 128-297 (355)
459 2ece_A 462AA long hypothetical 98.2 9.2E-05 3.1E-09 78.0 19.8 212 165-391 164-430 (462)
460 2oaj_A Protein SNI1; WD40 repe 98.2 5.1E-05 1.8E-09 89.7 20.3 204 192-433 19-245 (902)
461 2j04_B YDR362CP, TAU91; beta p 98.2 1.7E-05 5.7E-10 87.7 14.6 153 147-331 269-428 (524)
462 1pjx_A Dfpase, DIISOPROPYLFLUO 98.2 0.00017 5.7E-09 73.5 21.3 231 162-430 43-299 (314)
463 3fvz_A Peptidyl-glycine alpha- 98.1 0.00041 1.4E-08 71.5 24.2 158 156-338 103-284 (329)
464 3qqz_A Putative uncharacterize 98.1 0.00093 3.2E-08 65.5 25.2 207 192-430 28-253 (255)
465 3fvz_A Peptidyl-glycine alpha- 98.1 0.00056 1.9E-08 70.5 25.1 227 165-430 69-322 (329)
466 3mmy_A MRNA export factor; mRN 98.1 7.5E-05 2.5E-09 77.7 18.2 279 88-418 39-337 (368)
467 2hih_A Lipase 46 kDa form; A1 98.1 7.4E-06 2.5E-10 87.0 10.2 109 491-605 51-212 (431)
468 2qc5_A Streptogramin B lactona 98.1 0.0017 5.9E-08 65.1 27.8 274 89-429 20-299 (300)
469 3s94_A LRP-6, low-density lipo 98.1 0.00027 9.3E-09 79.4 23.3 207 90-338 350-558 (619)
470 3nok_A Glutaminyl cyclase; bet 98.1 9.3E-05 3.2E-09 72.2 16.8 157 150-338 60-217 (268)
471 2iwa_A Glutamine cyclotransfer 98.1 9.4E-05 3.2E-09 73.1 17.0 200 151-387 27-237 (266)
472 1fwx_A Nitrous oxide reductase 98.1 0.00015 5.1E-09 79.1 19.7 165 154-332 101-309 (595)
473 3tc9_A Hypothetical hydrolase; 98.1 0.00045 1.5E-08 74.1 23.4 151 154-331 149-301 (430)
474 3nol_A Glutamine cyclotransfer 98.1 0.00027 9.3E-09 68.9 19.2 196 92-329 46-254 (262)
475 2ovr_B FBW7, F-BOX/WD repeat p 98.0 0.0028 9.7E-08 68.1 29.1 231 147-430 202-442 (445)
476 1q7f_A NHL, brain tumor CG1071 98.0 0.0015 5.1E-08 65.4 24.7 231 156-429 42-279 (286)
477 4ggc_A P55CDC, cell division c 98.0 0.00064 2.2E-08 69.0 22.3 69 194-282 29-100 (318)
478 1whs_A Serine carboxypeptidase 98.0 5.4E-05 1.9E-09 73.6 12.1 143 460-610 23-191 (255)
479 3mbr_X Glutamine cyclotransfer 97.9 0.00076 2.6E-08 65.2 19.5 200 150-385 26-233 (243)
480 3nok_A Glutaminyl cyclase; bet 97.9 0.00053 1.8E-08 66.9 18.3 192 92-329 58-264 (268)
481 4hw6_A Hypothetical protein, I 97.9 0.0011 3.8E-08 71.0 22.3 149 155-330 153-303 (433)
482 2j04_B YDR362CP, TAU91; beta p 97.9 0.00019 6.5E-09 79.1 16.6 218 162-430 180-428 (524)
483 2z2n_A Virginiamycin B lyase; 97.9 0.0046 1.6E-07 61.9 25.4 223 156-429 27-254 (299)
484 2ovr_B FBW7, F-BOX/WD repeat p 97.8 0.016 5.4E-07 62.1 30.4 227 147-433 162-394 (445)
485 3mbr_X Glutamine cyclotransfer 97.8 0.0015 5E-08 63.2 19.0 198 90-329 22-233 (243)
486 3kya_A Putative phosphatase; s 97.8 0.00083 2.8E-08 72.3 18.7 161 154-331 151-341 (496)
487 2oit_A Nucleoporin 214KDA; NH2 97.8 0.00037 1.3E-08 75.0 16.1 116 192-331 94-223 (434)
488 2px6_A Thioesterase domain; th 97.8 0.00012 4.1E-09 75.1 11.7 93 492-604 46-145 (316)
489 4gq1_A NUP37; propeller, trans 97.8 0.00056 1.9E-08 72.5 17.2 107 156-282 102-220 (393)
490 2oit_A Nucleoporin 214KDA; NH2 97.7 0.00016 5.4E-09 77.9 12.6 155 149-331 97-278 (434)
491 2qe8_A Uncharacterized protein 97.7 0.00042 1.4E-08 72.0 15.0 199 89-317 67-310 (343)
492 3no2_A Uncharacterized protein 97.7 0.0027 9.3E-08 63.5 20.0 182 221-433 15-198 (276)
493 2p4o_A Hypothetical protein; p 97.7 0.0078 2.7E-07 61.0 23.6 148 155-331 43-198 (306)
494 4gq1_A NUP37; propeller, trans 97.7 0.00058 2E-08 72.4 15.3 66 155-233 156-221 (393)
495 1ivy_A Human protective protei 97.7 0.00018 6E-09 77.0 11.0 136 461-608 24-184 (452)
496 2qc5_A Streptogramin B lactona 97.6 0.012 4.1E-07 58.8 24.1 226 156-433 32-262 (300)
497 3qqz_A Putative uncharacterize 97.6 0.005 1.7E-07 60.2 20.0 213 84-331 22-253 (255)
498 2ad6_A Methanol dehydrogenase 97.6 0.11 3.6E-06 57.8 32.8 61 270-335 272-339 (571)
499 1p22_A F-BOX/WD-repeat protein 97.6 0.0094 3.2E-07 63.8 23.7 268 95-435 138-419 (435)
500 2vpj_A Kelch-like protein 12; 97.6 0.0091 3.1E-07 60.3 22.0 241 166-437 32-285 (301)
No 1
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=2e-69 Score=626.47 Aligned_cols=637 Identities=34% Similarity=0.634 Sum_probs=528.2
Q ss_pred ccCCCCCCCCcCCHHHHhccCCccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCC
Q 004816 68 ITAPYGSWKSPLTADVVSGASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGG 147 (729)
Q Consensus 68 ~~~~~~~~~~~lt~e~i~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~ 147 (729)
+++|||+|++|+|++.+......+..|+++ ++.++|+..+++++++..||....+ ++.++|+..+.+++..+++|++
T Consensus 3 ~~~~~g~w~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~l~~~~~~~~~~~~~~~~ 79 (662)
T 3azo_A 3 STAPYGAWQSPIDAALVASRSGRPACVGAV-GDEVWWVAPRPAEAGRATLVRRRAD--GAEESALPAPWNVRNRVFEYSG 79 (662)
T ss_dssp EECCTTCCCCSCCHHHHHHTCSCCEEEEEE-TTEEEEEEEETTTTTEEEEEEECTT--SCEEESSCTTCCBCCCGGGTCC
T ss_pred ccCCCcCCCCCCCHHHHhhcCCccceeEEc-CCeEEEEecCcccCCcEEEEEECCC--CCcceeCCCCccccccccccCC
Confidence 578999999999999999987888999999 8899999988777889999987444 5788888877788888999999
Q ss_pred ceEEEE----CCE-EEEEECCCCcEEEEeCC--CCCCCCeecCCCCCC-CceeeecceecCCCCEEEEEEeccCC-CCCC
Q 004816 148 GAFRIF----GDT-VIFSNYKDQRLYKHSID--SKDSSPLPITPDYGE-PLVSYADGIFDPRFNRYVTVREDRRQ-DALN 218 (729)
Q Consensus 148 ~~~~~~----~~~-i~~~~~~~~~l~~~d~~--~~~~~~~~lt~~~~~-~~~~~~~~~~SPdG~~l~~~~~~~~~-~~~~ 218 (729)
..+.++ ++. |+|....+.+||+++++ ++ ++.++|+..... ....+..++|||||++|+|++.+... .+..
T Consensus 80 ~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~-~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~ 158 (662)
T 3azo_A 80 FPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGG-AVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSD 158 (662)
T ss_dssp CCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTC-CCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTC
T ss_pred ccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCC-CCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCC
Confidence 887554 678 99998777899999997 21 457888873110 13677889999999999999875311 1112
Q ss_pred cceEEEEEEcCC------CceEEee-eCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeee-eEEec
Q 004816 219 STTEIVAIALNG------QNIQVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYK-RVCVA 290 (729)
Q Consensus 219 ~~~~l~~~dl~~------g~~~~lt-~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~-~~~~~ 290 (729)
...+||++++++ ++.++|+ .+......++|||||++|+|.+++.++++|...+||++|++.+|.... ..+..
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred ceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 346899999999 8889998 777788899999999999999988888888889999999983352212 33444
Q ss_pred CCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEE
Q 004816 291 GFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIAC 370 (729)
Q Consensus 291 ~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~ 370 (729)
+.. ..+..+.|||||+++|.++. .+..+||++|+++++.+.++........+.|+++...+.|. +++.+++
T Consensus 239 ~~~----~~~~~~~~spdg~l~~~~~~-~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~----~~~~~~~ 309 (662)
T 3azo_A 239 GPE----EAIAQAEWAPDGSLIVATDR-TGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPL----ANGLIAV 309 (662)
T ss_dssp ETT----BCEEEEEECTTSCEEEEECT-TSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEEC----TTSCEEE
T ss_pred CCC----ceEcceEECCCCeEEEEECC-CCCeEEEEEECCCCceeecccccccccCccccccCceEeEe----CCCEEEE
Confidence 333 45578999999998888877 67789999999899999998777677789999888888887 4566777
Q ss_pred EEEECCeEEEEEEECCCCceEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcceeeeeeEEecCCCCCc
Q 004816 371 SYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTL 449 (729)
Q Consensus 371 ~s~~~g~~~ly~~d~~~g~~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt~~~~~~~~~~~~ 449 (729)
...+ +..+||.+++++++.+.|+.+...+..+ +.+++.+++.+++.+.+.++|++++++++.++|+ ......
T Consensus 310 ~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~------~~~~~~ 382 (662)
T 3azo_A 310 VHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIG------ARHTDP 382 (662)
T ss_dssp EEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEE------SCCCCS
T ss_pred EEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEee------cCCccc
Confidence 8777 9999999999999999998877777777 7888999999999999999999999999876554 222344
Q ss_pred cCCCCCCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecC
Q 004816 450 KYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNY 529 (729)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~ 529 (729)
+....+..++.+.+... +|..++++++.|++..+.++++++.|+||++||+++......|...++.|+++||.|+.+|+
T Consensus 383 ~~~~~~~~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 461 (662)
T 3azo_A 383 VDPAYYPEPQIRTFTAP-DGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNY 461 (662)
T ss_dssp SCGGGSCCCEEEEEECT-TSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEEC
T ss_pred CCccccCcceEEEEEcC-CCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECC
Confidence 55566777899999987 89999999999987322222356789999999998777666788889999999999999999
Q ss_pred CCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHhCCCcceEEEEeccccChhH
Q 004816 530 GGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVADLSM 609 (729)
Q Consensus 530 rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~~~~~a~v~~~~~~d~~~ 609 (729)
||++++|+++.......++..+++|+.+++++|++++.+|++|++|+|||+||++++.++.+|++|+++|+.+|+.++..
T Consensus 462 rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~~~~~~~~v~~~~~~~~~~ 541 (662)
T 3azo_A 462 GGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVSTDVYACGTVLYPVLDLLG 541 (662)
T ss_dssp TTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCCCCSEEEEESCCCCHHH
T ss_pred CCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhCcCceEEEEecCCccCHHH
Confidence 99999999999887788888889999999999999988999999999999999999998888999999999999999877
Q ss_pred Hhh-hcchhhhhhhhhhcC----ChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEEC
Q 004816 610 LRA-ETHKFESRYIDNLVG----SEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYE 684 (729)
Q Consensus 610 ~~~-~~~~~~~~~~~~~~~----~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ 684 (729)
+.. ....+...+....++ +.+.|...+|+.+++++++|+|++||++|.+||++++.+++++|+..|++++++++|
T Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ 621 (662)
T 3azo_A 542 WADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFE 621 (662)
T ss_dssp HHTTCSCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEET
T ss_pred HhcccccchhhHhHHHHhCCCccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEEC
Confidence 655 333444444443333 456788899999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCcccHHHHHHHHHHHHHHHhCCCCCCCCCCceeccC
Q 004816 685 GEQHGFRKAENIKFTLEQQMVFFARVVGHFDVADEIIPIKIDN 727 (729)
Q Consensus 685 ~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~~~~~~~~~~ 727 (729)
+++|++...++..+.++.+++||.++|+..++. +|+++|+|
T Consensus 622 ~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~~~~--~~~~~~~~ 662 (662)
T 3azo_A 622 GEGHGFRRKETMVRALEAELSLYAQVFGVEVAG--VPLLKLGE 662 (662)
T ss_dssp TCCSSCCSHHHHHHHHHHHHHHHHHHTTCCCCS--SCCCCCBC
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHhCCCCCC--CCccccCC
Confidence 999998877788899999999999999854443 88988886
No 2
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=5.5e-55 Score=510.88 Aligned_cols=587 Identities=14% Similarity=0.129 Sum_probs=424.2
Q ss_pred CcCCHHHHhcc--CCccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCC--ceEEE
Q 004816 77 SPLTADVVSGA--SKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGG--GAFRI 152 (729)
Q Consensus 77 ~~lt~e~i~~~--~~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~--~~~~~ 152 (729)
.++|+|+++.. .....++.|+|++.+++.. ++...+|.. . +|+.+.++... ... .+.-.. ..|++
T Consensus 3 ~~~tl~~~~~~~~~~~~~~~~w~~dg~~~~~~-----~~~i~~~~~--~-~~~~~~~~~~~-~~~--~~~~~~~~~~~Sp 71 (740)
T 4a5s_A 3 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQ-----ENNILVFNA--E-YGNSSVFLENS-TFD--EFGHSINDYSISP 71 (740)
T ss_dssp EECCHHHHHHTCSCCCCCCEEECSSSEEEEEE-----TTEEEEEET--T-TCCEEEEECTT-TTT--TCCSCCCEEEECT
T ss_pred CceeHHHHhcCcccccccccEECCCCcEEEEc-----CCcEEEEEC--C-CCceEEEEech-hhh--hhcccccceEECC
Confidence 46899999987 2234689999943444433 355455544 3 23445554332 110 011011 23455
Q ss_pred ECCEEEEEECC--------CCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEE
Q 004816 153 FGDTVIFSNYK--------DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (729)
Q Consensus 153 ~~~~i~~~~~~--------~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~ 224 (729)
+++.|+|.... .+.+|++|+.+ ++.++|+.. ......++|||||++|+|+.+ .+||
T Consensus 72 dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~--~~~~~l~~~----~~~~~~~~~SPdG~~la~~~~----------~~i~ 135 (740)
T 4a5s_A 72 DGQFILLEYNYVKQWRHSYTASYDIYDLNK--RQLITEERI----PNNTQWVTWSPVGHKLAYVWN----------NDIY 135 (740)
T ss_dssp TSSEEEEEEEEEECSSSCEEEEEEEEETTT--TEECCSSCC----CTTEEEEEECSSTTCEEEEET----------TEEE
T ss_pred CCCEEEEEECCeeeEEEccceEEEEEECCC--CcEEEcccC----CCcceeeEECCCCCEEEEEEC----------CeEE
Confidence 66688887652 15799999998 888888875 234678899999999999964 4699
Q ss_pred EEEcCCCceEEeeeCCC-------------------eeeeeeeCCCCCeEEEEEecCCCCC-------------------
Q 004816 225 AIALNGQNIQVLVSGSD-------------------FYAFPRMDPRGERMAWIEWHHPNMP------------------- 266 (729)
Q Consensus 225 ~~dl~~g~~~~lt~~~~-------------------~~~~~~~SPDG~~la~~~~~~~~~~------------------- 266 (729)
++++++|+.++|+.+.. ....++|||||++|||.+.+....+
T Consensus 136 ~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~ 215 (740)
T 4a5s_A 136 VKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVR 215 (740)
T ss_dssp EESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEE
T ss_pred EEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCccee
Confidence 99999999999975332 1234899999999999986654211
Q ss_pred ---------CCCcEEEEEEecCC---CCe-eeeEEec-----CCCCCccccccCceeCCCCc-EEEEEecCCCceEEEEE
Q 004816 267 ---------WDKAELWVGYISEN---GDV-YKRVCVA-----GFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKW 327 (729)
Q Consensus 267 ---------~~~~~l~~~d~~~~---g~~-~~~~~~~-----~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~ 327 (729)
....+|+++|++ + ++. ....+.. +.+ .++..+.|||||+ +++..++.++...|+++
T Consensus 216 ~~yp~~G~~~~~~~l~v~d~~-~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~ 290 (740)
T 4a5s_A 216 VPYPKAGAVNPTVKFFVVNTD-SLSSVTNATSIQITAPASMLIGD----HYLCDVTWATQERISLQWLRRIQNYSVMDIC 290 (740)
T ss_dssp EECCBTTSCCCEEEEEEEETT-SCCSSSCCCEEEECCCHHHHTSC----EEEEEEEEEETTEEEEEEEESSTTEEEEEEE
T ss_pred ecCCCCcCcCCeeEEEEEECC-CCCCCCcceEEEecCCccCCCCC----eEEEEEEEeCCCeEEEEEeCCCCCEEEEEEE
Confidence 122379999998 6 521 1123322 233 6678899999999 77777664566789999
Q ss_pred EcCCCe-------EEEeecc--Cccc-----cCCcccccCcceeeeeecCCCCEEE-EEEEECCeEEEEEEECCCCceEe
Q 004816 328 IESNNE-------VLAIYSL--DAEF-----SRPLWVFGINSYEIIQSHGEKNLIA-CSYRQNGRSYLGILDDFGHSLSL 392 (729)
Q Consensus 328 d~~~g~-------~~~l~~~--~~~~-----~~~~w~~~~~~~~~l~~~~~~~~l~-~~s~~~g~~~ly~~d~~~g~~~~ 392 (729)
|+++|+ .+.++.+ ...+ ..+.|++ |++.|+ +.++++|..+||+++.++++.++
T Consensus 291 d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp------------DG~~l~~~~s~~~G~~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 291 DYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL------------DGNSFYKIISNEEGYRHICYFQIDKKDCTF 358 (740)
T ss_dssp EEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT------------TSSEEEEEEECTTSCEEEEEEETTCSSCEE
T ss_pred ECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC------------CCCEEEEEEEcCCCceEEEEEECCCCceEe
Confidence 999987 2333211 1111 1345554 888877 88889999999999999999999
Q ss_pred eccCCcceEEe-eeeCCEEEEEEeC--C-CCCceEEEEEcCCCcce-eeee----------eEEecCCCC----------
Q 004816 393 LDIPFTDIDNI-TLGNDCLFVEGAS--G-VEPSSVAKVTLDDHKLK-AVDF----------KVVWSSSPD---------- 447 (729)
Q Consensus 393 lt~~~~~v~~~-~~~~~~~~~~~~~--~-~~~~~ly~~d~~~~~~~-~lt~----------~~~~~~~~~---------- 447 (729)
||.+.+.+..+ ..+++.++|.++. . .....||++++++++.+ +||. ...++....
T Consensus 359 lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~ 438 (740)
T 4a5s_A 359 ITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPG 438 (740)
T ss_dssp SCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBS
T ss_pred cccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCC
Confidence 99998888776 4556665555543 1 22346999998877643 5551 122221110
Q ss_pred -C--cc----------------------CCCCCCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCC
Q 004816 448 -T--LK----------------------YKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGP 502 (729)
Q Consensus 448 -~--~~----------------------~~~~~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~ 502 (729)
+ .+ ....+..++.+++ .. +|..++++++.|++.. +.+++|+||++||++
T Consensus 439 ~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~-dg~~l~~~~~~P~~~~----~~~~~P~vv~~HGg~ 512 (740)
T 4a5s_A 439 LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-IL-NETKFWYQMILPPHFD----KSKKYPLLLDVYAGP 512 (740)
T ss_dssp SCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-EE-TTEEEEEEEEECTTCC----TTSCEEEEEECCCCT
T ss_pred CCEEEEEECCCCcEEEEeccChhhhhhhhhccCCccEEEEE-cc-CCeEEEEEEEeCCCCC----CCCCccEEEEECCCC
Confidence 0 00 0011233445556 44 8999999999998733 356789999999998
Q ss_pred CCCcc-ccch-hhhHHHh-hCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcC
Q 004816 503 TSEAR-GILN-LSIQYWT-SRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGS 579 (729)
Q Consensus 503 ~~~~~-~~~~-~~~~~la-~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S 579 (729)
+.... ..|. .....++ ++||+|+++|+||++++|..+.......++..+++|+.+++++|.+++.+|++||+|+|||
T Consensus 513 ~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S 592 (740)
T 4a5s_A 513 CSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWS 592 (740)
T ss_dssp TCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEET
T ss_pred cccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEEC
Confidence 76432 2222 2344555 5899999999999999999999988888988899999999999998888999999999999
Q ss_pred hHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhh--cCChhhhhhcCcccccCCCCC-CEEEEEeCC
Q 004816 580 AGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNL--VGSEKDYYEKSPINFVDKFSC-PIILFQGLE 655 (729)
Q Consensus 580 ~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~-PvL~i~G~~ 655 (729)
|||++|+.++. +|++|+++|+.+|+.++..+.. .+...++... ..+.+.|...+|+.+++++++ |+|++||++
T Consensus 593 ~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~ 669 (740)
T 4a5s_A 593 YGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDS---VYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTA 669 (740)
T ss_dssp HHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBH---HHHHHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETT
T ss_pred HHHHHHHHHHHhCCCceeEEEEcCCccchHHhhh---HHHHHHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCC
Confidence 99999999998 9999999999999999865422 2233344333 335677889999999999996 999999999
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhCCCCC
Q 004816 656 DKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVGHFDV 716 (729)
Q Consensus 656 D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 716 (729)
|.+||++++.+++++|+++|++++++++|+++|.+...+.....++.+.+||.++|+...+
T Consensus 670 D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~~ 730 (740)
T 4a5s_A 670 DDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLPAA 730 (740)
T ss_dssp CSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred CCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999999877778889999999999999985433
No 3
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=9.9e-53 Score=493.04 Aligned_cols=587 Identities=17% Similarity=0.220 Sum_probs=430.2
Q ss_pred CCcCCHHHHhcc----CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcc------------
Q 004816 76 KSPLTADVVSGA----SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAV------------ 138 (729)
Q Consensus 76 ~~~lt~e~i~~~----~~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~------------ 138 (729)
..+||+++++.. ...+..++||| |+.+++...+..+.....|+.++..+ |+.+.++......
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 98 (741)
T 2ecf_A 20 AEKLTLEAITGPLPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS-GQTRLLVDSKVVLPGTETLSDEEKA 98 (741)
T ss_dssp --CCCHHHHTSSSCTTCCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT-CCEEEEECGGGTC------------
T ss_pred cccccHHHHhccCCcCCCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC-CceeEccchhhcccccccccchhhh
Confidence 478999999953 34577999999 89999987533223355677777663 3555555321000
Q ss_pred ---ccccc---ccCCceEEEECCEEEEEECCCCcEEEEeCCCCCC---CCeecCCCCCCCceeeecceecCCCCEEEEEE
Q 004816 139 ---RTTAQ---EYGGGAFRIFGDTVIFSNYKDQRLYKHSIDSKDS---SPLPITPDYGEPLVSYADGIFDPRFNRYVTVR 209 (729)
Q Consensus 139 ---~~~~~---~~~~~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~---~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~ 209 (729)
+.++. ......|+++++.|++... ++||++|+++ + ..++++.. ......++|||||++|+|+.
T Consensus 99 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~--~~i~~~d~~~--~~~~~~~~l~~~----~~~~~~~~~SPDG~~la~~~ 170 (741)
T 2ecf_A 99 RRERQRIAAMTGIVDYQWSPDAQRLLFPLG--GELYLYDLKQ--EGKAAVRQLTHG----EGFATDAKLSPKGGFVSFIR 170 (741)
T ss_dssp --------CCEESCCCEECTTSSEEEEEET--TEEEEEESSS--CSTTSCCBCCCS----SSCEEEEEECTTSSEEEEEE
T ss_pred hhhhhhhccccCcceeEECCCCCEEEEEeC--CcEEEEECCC--CCcceEEEcccC----CcccccccCCCCCCEEEEEe
Confidence 00000 1123445666778888875 7899999998 7 77788765 34567889999999999987
Q ss_pred eccCCCCCCcceEEEEEEcCCCceEEeeeCCCe-----------------eeeeeeCCCCCeEEEEEecCCCCC------
Q 004816 210 EDRRQDALNSTTEIVAIALNGQNIQVLVSGSDF-----------------YAFPRMDPRGERMAWIEWHHPNMP------ 266 (729)
Q Consensus 210 ~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~-----------------~~~~~~SPDG~~la~~~~~~~~~~------ 266 (729)
+ .+||++|+++++.++++..... ...++|||||++|+|.+.+....+
T Consensus 171 ~----------~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~ 240 (741)
T 2ecf_A 171 G----------RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYE 240 (741)
T ss_dssp T----------TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEE
T ss_pred C----------CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCC
Confidence 4 3699999999988888764322 356899999999999976542111
Q ss_pred -------------------CCCcEEEEEEecCC-CCeeee----------------------------------------
Q 004816 267 -------------------WDKAELWVGYISEN-GDVYKR---------------------------------------- 286 (729)
Q Consensus 267 -------------------~~~~~l~~~d~~~~-g~~~~~---------------------------------------- 286 (729)
.....|+++|++ + ++...+
T Consensus 241 ~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~ 319 (741)
T 2ecf_A 241 VYADRTDVIEQRYPAAGDANVQVKLGVISPA-EQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTL 319 (741)
T ss_dssp ECSSCEEEEEEECCBTTSCCCEEEEEEECSS-TTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEET
T ss_pred CCCCcccceEeecCCCCCCCCeeEEEEEECC-CCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEEC
Confidence 012256666665 4 322110
Q ss_pred ------EEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCC-cccccCcceeee
Q 004816 287 ------VCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRP-LWVFGINSYEII 359 (729)
Q Consensus 287 ------~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~-~w~~~~~~~~~l 359 (729)
.++......|......+.|+|||++++.+.. .+..+||.++.+++ .+.|+.....+... .|++
T Consensus 320 ~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~-~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~-------- 389 (741)
T 2ecf_A 320 ASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSER-TGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDE-------- 389 (741)
T ss_dssp TTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECT-TSSCEEEEECSSSC-EEESCCSSSCEEEEEEEET--------
T ss_pred CCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecC-CCccEEEEEcCCCC-eeeeeecceEEEeEeEEeC--------
Confidence 0111111011112357899999997777776 67889999998777 77777544333333 2443
Q ss_pred eecCCCCEEEEEEEECC--eEEEEEEECCCCceEeeccCCcceEEe--eeeCCEEEEEEeCCCCCceEEEEEcCCCccee
Q 004816 360 QSHGEKNLIACSYRQNG--RSYLGILDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKA 435 (729)
Q Consensus 360 ~~~~~~~~l~~~s~~~g--~~~ly~~d~~~g~~~~lt~~~~~v~~~--~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~ 435 (729)
+++.|++.+..++ ..+||.++.+++..+.|+. ...+..+ +++++.+++..++...|.++|+++.+++..+.
T Consensus 390 ----dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~ 464 (741)
T 2ecf_A 390 ----KAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIAT 464 (741)
T ss_dssp ----TTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEEC
T ss_pred ----CCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEE
Confidence 7888988887766 7889999988887888886 3334444 67788888888999999999999987766544
Q ss_pred eeeeEEecCCCC---C-ccCCC--CCCCcEEEEeeccCCC-eEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcc-
Q 004816 436 VDFKVVWSSSPD---T-LKYKS--YFSLPELIEFPTEVPG-QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR- 507 (729)
Q Consensus 436 lt~~~~~~~~~~---~-~~~~~--~~~~~~~~~~~~~~dG-~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~- 507 (729)
|+ .+.. . .+.+. .+..++.+++... +| ..++++++.|.+.. ++++.|+||++||+++....
T Consensus 465 l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~l~~~~~~P~~~~----~~~~~p~vv~~hG~~~~~~~~ 533 (741)
T 2ecf_A 465 LV------ENDLADPKHPYARYREAQRPVEFGTLTAA-DGKTPLNYSVIKPAGFD----PAKRYPVAVYVYGGPASQTVT 533 (741)
T ss_dssp SS------CCCSSSTTSTTHHHHTTCCCEEEEEEECT-TSSCEEEEEEECCSSCC----TTSCEEEEEECCCSTTCCSCS
T ss_pred ec------cCcccccccchhhhhccCCCcEEEEEEcC-CCCEEEEEEEEeCCCCC----CCCCcCEEEEEcCCCCccccc
Confidence 43 2111 0 23333 5677899999997 89 99999999997632 24567999999998765421
Q ss_pred ccch-----hhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHH
Q 004816 508 GILN-----LSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGG 582 (729)
Q Consensus 508 ~~~~-----~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG 582 (729)
..|. ..++.|+++||.|+++|+||+++++..+.......++..+++|+.+++++|.+++.+|.+|++|+|||+||
T Consensus 534 ~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG 613 (741)
T 2ecf_A 534 DSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGG 613 (741)
T ss_dssp SCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHH
T ss_pred ccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHH
Confidence 2343 57889999999999999999999999888877778887889999999999999888889999999999999
Q ss_pred HHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCCh
Q 004816 583 YTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPP 661 (729)
Q Consensus 583 ~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~ 661 (729)
++++.++. +|++|+++|+.+|+.++..+.. .+...++.......+.|...+|+..+.++++|+|++||++|.++|+
T Consensus 614 ~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~ 690 (741)
T 2ecf_A 614 YMTLMLLAKASDSYACGVAGAPVTDWGLYDS---HYTERYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLF 690 (741)
T ss_dssp HHHHHHHHHCTTTCSEEEEESCCCCGGGSBH---HHHHHHHCCTGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSCT
T ss_pred HHHHHHHHhCCCceEEEEEcCCCcchhhhcc---ccchhhcCCcccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCCH
Confidence 99999988 8999999999999988753321 1122222222223566778899999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 662 DQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 662 ~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
+++.+++++|+..+++++++++|+++|.+..... .+.++.+++||+++|+
T Consensus 691 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 691 TNSTSLMSALQKRGQPFELMTYPGAKHGLSGADA-LHRYRVAEAFLGRCLK 740 (741)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHH-HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCceEEEEECCCCCCCCCCch-hHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999865433 7889999999999986
No 4
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=5.9e-53 Score=480.68 Aligned_cols=537 Identities=19% Similarity=0.167 Sum_probs=415.2
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECC---CC
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYK---DQ 165 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~ 165 (729)
.+..+.++| |+.++|...+ +|+..||..+ +|+.++++..... ......+++++++|.... +.
T Consensus 23 ~~~~~~~~~DG~~la~~s~~---~g~~~lw~~~---~g~~~~lt~~~~~--------~~~~~~~spd~~l~~~~~~~g~~ 88 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFS---EGSVNAYLYD---GGETVKLNREPIN--------SVLDPHYGVGRVILVRDVSKGAE 88 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEE---TTEEEEEEEE---TTEEEECCSSCCS--------EECEECTTCSEEEEEEECSTTSC
T ss_pred chheeecCCCCCeEEEEEcc---CCceeEEEEc---CCCcEeeeccccc--------ccccccCCCCeEEEEeccCCCCc
Confidence 356788999 9999998753 4677899863 2466777654310 112233344578887654 22
Q ss_pred --cEEEEeC--CCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCC
Q 004816 166 --RLYKHSI--DSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSD 241 (729)
Q Consensus 166 --~l~~~d~--~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~ 241 (729)
+||.+++ ++ ...+++... .. ...+|||||+.++++..... .+.++|+++++.++++....
T Consensus 89 ~~~l~~~~~~~~g---~~~~l~~~~---~~--~~~~~s~dg~~~~~~s~~~~--------~~~l~d~~~g~~~~l~~~~~ 152 (582)
T 3o4h_A 89 QHALFKVNTSRPG---EEQRLEAVK---PM--RILSGVDTGEAVVFTGATED--------RVALYALDGGGLRELARLPG 152 (582)
T ss_dssp CEEEEEEETTSTT---CCEECTTSC---SB--EEEEEEECSSCEEEEEECSS--------CEEEEEEETTEEEEEEEESS
T ss_pred ceEEEEEeccCCC---ccccccCCC---Cc--eeeeeCCCCCeEEEEecCCC--------CceEEEccCCcEEEeecCCC
Confidence 7899998 54 344776552 22 34589999999888866442 24466999999999987655
Q ss_pred eeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCc
Q 004816 242 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGF 321 (729)
Q Consensus 242 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~ 321 (729)
..+.|||||++|++.+.+..+ ..+||++|++ +|+. ..+ .+.. .....++|||||+.++.+.. .+.
T Consensus 153 --~~~~~spDG~~la~~~~~~~~----~~~i~~~d~~-~g~~--~~l-~~~~----~~~~~~~~SpDG~~l~~~~~-~~~ 217 (582)
T 3o4h_A 153 --FGFVSDIRGDLIAGLGFFGGG----RVSLFTSNLS-SGGL--RVF-DSGE----GSFSSASISPGMKVTAGLET-ARE 217 (582)
T ss_dssp --CEEEEEEETTEEEEEEEEETT----EEEEEEEETT-TCCC--EEE-CCSS----CEEEEEEECTTSCEEEEEEC-SSC
T ss_pred --ceEEECCCCCEEEEEEEcCCC----CeEEEEEcCC-CCCc--eEe-ecCC----CccccceECCCCCEEEEccC-CCe
Confidence 679999999999998865432 2569999998 6765 233 3333 45578999999993335555 677
Q ss_pred eEEEEEEcCCCeEEEeeccCccccCCc--------ccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEee
Q 004816 322 WNLHKWIESNNEVLAIYSLDAEFSRPL--------WVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 393 (729)
Q Consensus 322 ~~l~~~d~~~g~~~~l~~~~~~~~~~~--------w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~l 393 (729)
.+|+++|+++++.+.+......+..+. |++ |+ .++++...++..+||.+ |+...
T Consensus 218 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp------------dg-~~~~~~~~~g~~~l~~~----g~~~~- 279 (582)
T 3o4h_A 218 ARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLP------------DG-RLAVVARREGRSAVFID----GERVE- 279 (582)
T ss_dssp EEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECT------------TS-CEEEEEEETTEEEEEET----TEEEC-
T ss_pred eEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcC------------CC-cEEEEEEcCCcEEEEEE----CCeec-
Confidence 899999999998883333333343444 554 66 88999999999999876 44433
Q ss_pred ccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcceeeeeeEEecCCCCCccCC---CCCCCcEEEEeeccCCC
Q 004816 394 DIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTLKYK---SYFSLPELIEFPTEVPG 469 (729)
Q Consensus 394 t~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dG 469 (729)
.....+..+ .. ++++++..++...|.++|++++++ +.++| .+.+ ..+...+.++++.. +|
T Consensus 280 -~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l------------~~~~~~~~~~~~~~~~~~~~~-~g 343 (582)
T 3o4h_A 280 -APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG------------GLPEDLRRSIAGSRLVWVESF-DG 343 (582)
T ss_dssp -CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECC------------CCCHHHHHTEEEEEEEEEECT-TS
T ss_pred -cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE------------ecCCccccccCcceEEEEECC-CC
Confidence 223456666 34 788889999999999999998765 54333 1222 44567789999998 89
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCc
Q 004816 470 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI 549 (729)
Q Consensus 470 ~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~ 549 (729)
..++++++.|++. .++.|+||++||+++......|...++.|+++||.|+++|+||++++|.++.......++.
T Consensus 344 ~~i~~~~~~p~~~------~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~ 417 (582)
T 3o4h_A 344 SRVPTYVLESGRA------PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCG 417 (582)
T ss_dssp CEEEEEEEEETTS------CSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTT
T ss_pred CEEEEEEEcCCCC------CCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhccc
Confidence 9999999999762 2378999999999877767778889999999999999999999999999999888888888
Q ss_pred ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhc-C
Q 004816 550 VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLV-G 627 (729)
Q Consensus 550 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~-~ 627 (729)
..++|+.++++++.+++.+| +++|+|||+||++++.++. +|++|+++|+.+|+.++..+..........+....+ .
T Consensus 418 ~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (582)
T 3o4h_A 418 GELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGG 495 (582)
T ss_dssp HHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHHHHHHHHHTTT
T ss_pred ccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccchhHHHHHHHcCc
Confidence 88999999999999997776 9999999999999999998 799999999999999988766544333322333333 3
Q ss_pred ChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHH
Q 004816 628 SEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFF 707 (729)
Q Consensus 628 ~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl 707 (729)
+.+.+...+|+.++.++++|+|++||++|.++|++++++++++|+.+|++++++++|+++|.+...+...+.++.+++||
T Consensus 496 ~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 575 (582)
T 3o4h_A 496 SREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFL 575 (582)
T ss_dssp CHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHH
T ss_pred CHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHH
Confidence 56788899999999999999999999999999999999999999999999999999999999887788889999999999
Q ss_pred HHHhCC
Q 004816 708 ARVVGH 713 (729)
Q Consensus 708 ~~~l~~ 713 (729)
+++|++
T Consensus 576 ~~~l~~ 581 (582)
T 3o4h_A 576 ATQRER 581 (582)
T ss_dssp HHHHTC
T ss_pred HHHcCC
Confidence 999973
No 5
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=3e-51 Score=477.17 Aligned_cols=578 Identities=15% Similarity=0.140 Sum_probs=423.2
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCC--
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQ-- 165 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-- 165 (729)
.+...|. | |+++||+.... ...+..||+.+..+ ++.+.|++...-....-...+...|+++++.|+|.....+
T Consensus 74 ~~~~~p~--~dG~~~~~~~~~~-~~~~~~l~~~~~~~-~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~ 149 (710)
T 2xdw_A 74 PKYSCHF--KKGKRYFYFYNTG-LQNQRVLYVQDSLE-GEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSD 149 (710)
T ss_dssp CEECCCE--EETTEEEEEEECS-SCSSCEEEEESSTT-SCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCS
T ss_pred ccCCCCE--EECCEEEEEEEcC-CceEEEEEEEcCCC-CCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCc
Confidence 3455665 6 99999998744 23445889887652 3555554321000000012234456666778998876544
Q ss_pred --cEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCC-------CCCcceEEEEEEcCCCce--E
Q 004816 166 --RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD-------ALNSTTEIVAIALNGQNI--Q 234 (729)
Q Consensus 166 --~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~-------~~~~~~~l~~~dl~~g~~--~ 234 (729)
+||++|+++ ++..+++.. ...+..++|||||+.|+|++.+.... ......+||++++.+++. +
T Consensus 150 ~~~i~v~d~~t--g~~~~~~~~----~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~ 223 (710)
T 2xdw_A 150 WVTIKFMKVDG--AKELPDVLE----RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDI 223 (710)
T ss_dssp CEEEEEEETTT--TEEEEEEEE----EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCE
T ss_pred eEEEEEEECCC--CCCCccccc----CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccce
Confidence 899999998 776665433 23356789999999999998654310 012246799999988763 3
Q ss_pred EeeeC---CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCC------CCeeeeEEecCCCCCccccccCcee
Q 004816 235 VLVSG---SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN------GDVYKRVCVAGFDPTIVESPTEPKW 305 (729)
Q Consensus 235 ~lt~~---~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~------g~~~~~~~~~~~~~~~~~~~~~~~w 305 (729)
.+... ..+..++.|||||++|++.+..... ...+||++|++ + +......+....+ . ....|
T Consensus 224 ~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~---~~~~l~~~d~~-~~~~~~~~~~~~~~l~~~~~-----~-~~~~~ 293 (710)
T 2xdw_A 224 LCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD---PVNRLWYCDLQ-QESNGITGILKWVKLIDNFE-----G-EYDYV 293 (710)
T ss_dssp EEECCTTCTTCEEEEEECTTSCEEEEEEECSSS---SCCEEEEEEGG-GSSSSSCSSCCCEEEECSSS-----S-CEEEE
T ss_pred EEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC---CccEEEEEECc-ccccccCCccceEEeeCCCC-----c-EEEEE
Confidence 44333 3345689999999999998853321 15689999998 5 4321233433332 1 12369
Q ss_pred CCCCc-EEEEEecCCCceEEEEEEcCCCe---EEEeeccCc--cccCCcccccCcceeeeeecCCCCEEEEEEEECCeEE
Q 004816 306 SSKGE-LFFVTDRKNGFWNLHKWIESNNE---VLAIYSLDA--EFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSY 379 (729)
Q Consensus 306 spDG~-l~~~~~~~~g~~~l~~~d~~~g~---~~~l~~~~~--~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ 379 (729)
++||+ |+|.++.......|+++|+++++ .+.|+.+.. .+. .+.+. +++.++++..+++..+
T Consensus 294 s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~---------~~~~~----~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 294 TNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLE---------WVACV----RSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEE---------EEEEE----TTTEEEEEEEETTEEE
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEE---------EEEEE----cCCEEEEEEEECCEEE
Confidence 99999 88888763447889999998874 466664321 121 23333 5678999999999999
Q ss_pred EEEEECCCCc-eEeeccCCcceEEe--eeeCCEEEEEEeCCCCCceEEEEEcCCCc--ceeeeeeEEecCCCCCccCCCC
Q 004816 380 LGILDDFGHS-LSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK--LKAVDFKVVWSSSPDTLKYKSY 454 (729)
Q Consensus 380 ly~~d~~~g~-~~~lt~~~~~v~~~--~~~~~~~~~~~~~~~~~~~ly~~d~~~~~--~~~lt~~~~~~~~~~~~~~~~~ 454 (729)
|+++++.+|+ .+.|+.+...+..+ .++++.+++..++..+|.++|++|+++++ .+.+.+ .....++...
T Consensus 361 l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~------~~~~~~~~~~ 434 (710)
T 2xdw_A 361 LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFRE------VTVKGIDASD 434 (710)
T ss_dssp EEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEE------CCCTTCCGGG
T ss_pred EEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeee------cccCCcCccc
Confidence 9999995554 67787765556555 44667899999999999999999999887 544432 1112233333
Q ss_pred CCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhh-CCcEEEEecCCCCC
Q 004816 455 FSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGST 533 (729)
Q Consensus 455 ~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~-~G~~v~~~d~rGs~ 533 (729)
+ .++.+.+.+. ||..++++++.|++.. ..++.|+||++||+++....+.|....+.|++ +||.|+++|+||++
T Consensus 435 ~-~~~~~~~~~~-dg~~i~~~~~~p~~~~----~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g 508 (710)
T 2xdw_A 435 Y-QTVQIFYPSK-DGTKIPMFIVHKKGIK----LDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGG 508 (710)
T ss_dssp E-EEEEEEEECT-TSCEEEEEEEEETTCC----CSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSS
T ss_pred c-EEEEEEEEcC-CCCEEEEEEEecCCCC----CCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCC
Confidence 3 5688999988 9999999999998732 24678999999999887777778776778888 99999999999999
Q ss_pred CCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhh
Q 004816 534 GYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRA 612 (729)
Q Consensus 534 g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~ 612 (729)
++|..|.......++...++|+.+++++|++++.+|++||+|+|+|+||++++.++. +|++|+++|+.+|+.++..+..
T Consensus 509 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~ 588 (710)
T 2xdw_A 509 EYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHK 588 (710)
T ss_dssp TTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGG
T ss_pred CCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccc
Confidence 999999988777777778999999999999999899999999999999999999998 8999999999999998765533
Q ss_pred hcch--hhhhhhhhhcCC---hhhhhhcCcccccC-----CCCC-CEEEEEeCCCCCCChHHHHHHHHHHHhC-------
Q 004816 613 ETHK--FESRYIDNLVGS---EKDYYEKSPINFVD-----KFSC-PIILFQGLEDKVVPPDQARKIYKALKEN------- 674 (729)
Q Consensus 613 ~~~~--~~~~~~~~~~~~---~~~~~~~sp~~~~~-----~i~~-PvL~i~G~~D~~vp~~~~~~~~~~l~~~------- 674 (729)
.... +...+.. . .+ .+.+...+|+.++. ++++ |+|++||++|.+||+.++.+++++|+..
T Consensus 589 ~~~~~~~~~~~g~-~-~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 666 (710)
T 2xdw_A 589 YTIGHAWTTDYGC-S-DSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQ 666 (710)
T ss_dssp STTGGGGHHHHCC-T-TSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTC
T ss_pred cCCChhHHHhCCC-C-CCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCC
Confidence 2110 1111100 0 11 23456789999998 7886 9999999999999999999999999987
Q ss_pred CCCEEEEEECCCCcccCCc-ccHHHHHHHHHHHHHHHhCC
Q 004816 675 GLPVALVEYEGEQHGFRKA-ENIKFTLEQQMVFFARVVGH 713 (729)
Q Consensus 675 g~~~~~~~~~~~gH~~~~~-~~~~~~~~~~~~fl~~~l~~ 713 (729)
|.++++++++++||++..+ ....+.++.+++||.++|+.
T Consensus 667 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 706 (710)
T 2xdw_A 667 NNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 706 (710)
T ss_dssp CSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 8899999999999998765 34568889999999999973
No 6
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=2.3e-51 Score=475.67 Aligned_cols=574 Identities=14% Similarity=0.134 Sum_probs=416.9
Q ss_pred cCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCC----c
Q 004816 91 LGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQ----R 166 (729)
Q Consensus 91 ~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~ 166 (729)
..-|... |+++||..... ...+..+||.... ++...|++...-........++.+|+++++.|+|..+..| .
T Consensus 81 ~~~p~~~-g~~~y~~~~~~-~~~~~~~~r~~~~--~~~~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~ 156 (693)
T 3iuj_A 81 EGAPFRE-GRYHYFFKNDG-LQNQNVLWRQQEG--KPAEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWRE 156 (693)
T ss_dssp ECCCEEE-TTEEEEEEECS-SCSSCEEEEECTT--SCCEEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEE
T ss_pred CCCCEEE-CCEEEEEEEcC-CCceeEEEEeCCC--CCcEEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEE
Confidence 3344433 89999987644 3445578886544 3444454321000111112233455566778999876544 7
Q ss_pred EEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCC----CCCCcceEEEEEEcCCCce--EEeeeCC
Q 004816 167 LYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ----DALNSTTEIVAIALNGQNI--QVLVSGS 240 (729)
Q Consensus 167 l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~----~~~~~~~~l~~~dl~~g~~--~~lt~~~ 240 (729)
|+++|+++ ++..+.+.. ......++|| ||+.|+|++.+... .......+||++++.++.. +.+....
T Consensus 157 i~v~dl~t--g~~~~~~~~----~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~ 229 (693)
T 3iuj_A 157 IHLMDVES--KQPLETPLK----DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAI 229 (693)
T ss_dssp EEEEETTT--CSEEEEEEE----EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCS
T ss_pred EEEEECCC--CCCCccccC----CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecC
Confidence 99999998 765554332 2335788999 99999999876430 0012346899999987643 5555443
Q ss_pred C----eeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEE
Q 004816 241 D----FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVT 315 (729)
Q Consensus 241 ~----~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~ 315 (729)
+ +..++.|||||++|++...... ...+||++|++ ++......+....+ ....+ |++||+ |+|.+
T Consensus 230 ~~~~~~~~~~~~SpDg~~l~~~~~~~~----~~~~i~~~d~~-~~~~~~~~l~~~~~-----~~~~~-~~~~g~~l~~~t 298 (693)
T 3iuj_A 230 PAQHHRYVGATVTEDDRFLLISAANST----SGNRLYVKDLS-QENAPLLTVQGDLD-----ADVSL-VDNKGSTLYLLT 298 (693)
T ss_dssp GGGCCSEEEEEECTTSCEEEEEEESSS----SCCEEEEEETT-STTCCCEEEECSSS-----SCEEE-EEEETTEEEEEE
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEccCC----CCcEEEEEECC-CCCCceEEEeCCCC-----ceEEE-EeccCCEEEEEE
Confidence 3 4678999999999998874432 23689999998 55322234444332 11223 788888 98888
Q ss_pred ecCCCceEEEEEEcCCCeE---EEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEe
Q 004816 316 DRKNGFWNLHKWIESNNEV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSL 392 (729)
Q Consensus 316 ~~~~g~~~l~~~d~~~g~~---~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~ 392 (729)
+......+|+++|+++++. +.|+++..... .|++ +++.|++...++|..+|++++++++..+.
T Consensus 299 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~------------~g~~lv~~~~~~g~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 299 NRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHS------------GSGYLFAEYMVDATARVEQFDYEGKRVRE 364 (693)
T ss_dssp CTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEE------------ETTEEEEEEEETTEEEEEEECTTSCEEEE
T ss_pred CCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEE------------ECCEEEEEEEECCeeEEEEEECCCCeeEE
Confidence 8734468999999988654 66765443221 3443 77889999999999999999999888888
Q ss_pred eccCCc-ceEEe--eeeCCEEEEEEeCCCCCceEEEEEcCCCcceeeeeeEEecCCCCCccCCCCCCCcEEEEeeccCCC
Q 004816 393 LDIPFT-DIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTEVPG 469 (729)
Q Consensus 393 lt~~~~-~v~~~--~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG 469 (729)
|+.+.. .+..+ ..+++.+++..++..+|..+|.+|+++++.+.|+. .. ..+++..+ ..+.+.+.+. +|
T Consensus 365 l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~------~~-~~~~~~~~-~~~~~~~~~~-dg 435 (693)
T 3iuj_A 365 VALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRA------SA-APFKPEDY-VSEQRFYQSK-DG 435 (693)
T ss_dssp ECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEEC------CC-SSCCGGGE-EEEEEEEECT-TS
T ss_pred eecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEe------CC-CCcChhhC-eeEEEEEecC-CC
Confidence 876543 44444 44677888889999999999999999888655442 21 22444333 5788999988 99
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCc
Q 004816 470 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI 549 (729)
Q Consensus 470 ~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~ 549 (729)
..++++++.|++.. ..++.|+||++||+++......|....+.|+++||+|+.+|+||++++|..|.......++.
T Consensus 436 ~~i~~~l~~p~~~~----~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~ 511 (693)
T 3iuj_A 436 TRVPLIISYRKGLK----LDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQ 511 (693)
T ss_dssp CEEEEEEEEESSCC----CSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTH
T ss_pred cEEEEEEEecCCCC----CCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCC
Confidence 99999999998632 25678999999999888778888888889999999999999999999999999988777777
Q ss_pred ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcch--hhhhhhhhhc
Q 004816 550 VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHK--FESRYIDNLV 626 (729)
Q Consensus 550 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~--~~~~~~~~~~ 626 (729)
..++|+.+++++|++++.+|++||+|+|+|+||++++.++. +|++|+++|+.+|+.|+..+...... +...+ ....
T Consensus 512 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-g~p~ 590 (693)
T 3iuj_A 512 NVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGTGWAYDY-GTSA 590 (693)
T ss_dssp HHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGGGCHHHH-CCTT
T ss_pred CcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCchhHHHHc-CCcc
Confidence 78999999999999999999999999999999999999998 89999999999999998655331111 11111 1111
Q ss_pred CC---hhhhhhcCcccccCC-CCCC-EEEEEeCCCCCCChHHHHHHHHHHHhC---CCCEEEEEECCCCcccCCc-ccHH
Q 004816 627 GS---EKDYYEKSPINFVDK-FSCP-IILFQGLEDKVVPPDQARKIYKALKEN---GLPVALVEYEGEQHGFRKA-ENIK 697 (729)
Q Consensus 627 ~~---~~~~~~~sp~~~~~~-i~~P-vL~i~G~~D~~vp~~~~~~~~~~l~~~---g~~~~~~~~~~~gH~~~~~-~~~~ 697 (729)
.. .+.+...+|+.++.+ +++| +|++||++|.+||+.++.+++++|+++ |+++++++++++||++..+ +...
T Consensus 591 ~~~~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 670 (693)
T 3iuj_A 591 DSEAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLI 670 (693)
T ss_dssp SCHHHHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHH
T ss_pred CHHHHHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHH
Confidence 11 124567899999999 8988 999999999999999999999999997 5899999999999998765 5667
Q ss_pred HHHHHHHHHHHHHhCCC
Q 004816 698 FTLEQQMVFFARVVGHF 714 (729)
Q Consensus 698 ~~~~~~~~fl~~~l~~~ 714 (729)
+.++.+++||.++|+..
T Consensus 671 ~~~~~~~~fl~~~l~~~ 687 (693)
T 3iuj_A 671 EQSADIYAFTLYEMGYR 687 (693)
T ss_dssp HHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 88889999999999844
No 7
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=3.5e-51 Score=476.72 Aligned_cols=568 Identities=15% Similarity=0.077 Sum_probs=412.1
Q ss_pred cCceEEcCCCcEEEEeecCCCCCceEEEEcCC---CCCC--CCcccCCCCCccccccccc---CCceEE-EECCEEEEEE
Q 004816 91 LGGTAVDGHGRLIWLESRPTEAGRGVLVKEPA---KAGD--EPSDITPKEYAVRTTAQEY---GGGAFR-IFGDTVIFSN 161 (729)
Q Consensus 91 ~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~---~~~g--~~~~l~~~~~~~~~~~~~~---~~~~~~-~~~~~i~~~~ 161 (729)
.+.|... |+++||+..... +.+..+++.+. + ++ ..+.+++ + +..+..+++ +...|+ ++++.|+|..
T Consensus 119 ~~~p~~~-g~~~yy~~~~~g-~~~~vl~r~~~~~~~-~~~~~~~vlld-~-n~~a~~~~~~~~~~~~~S~PDG~~lAy~~ 193 (751)
T 2xe4_A 119 MSAPYVY-GKYRYYTREVKG-KPYKIYCRVFTDKEP-GDVAAEEVIID-V-NQVAEGKAFCDVMEVKPAPPEHDLVAFSV 193 (751)
T ss_dssp ECCCEEE-TTEEEEEEECTT-CCSCEEEEEETTSCT-TCTTTCEEEEE-H-HHHTTTCSCCEEEEEEECTTTTCEEEEEE
T ss_pred CCCCeEE-CCEEEEEEECCC-CceeEEEEEcCCCCC-CCCcCCEEEec-h-hHhccCCCeEEEeeeEecCCCCCEEEEEE
Confidence 4556645 999999976432 33456777764 3 22 2333332 2 333322333 334455 5566899988
Q ss_pred CCCC----cEEEEeCCCCCC-CCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce--E
Q 004816 162 YKDQ----RLYKHSIDSKDS-SPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI--Q 234 (729)
Q Consensus 162 ~~~~----~l~~~d~~~~~~-~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~--~ 234 (729)
...| +||++|+++ + + .++..- ......++|||||+.|+|++.+.... ..+||++++.+++. +
T Consensus 194 ~~~G~~~~~l~v~dl~~--g~~--~l~~~~---~~~~~~~~WspDg~~l~y~~~d~~~~----~~~v~~~~lgt~~~~~~ 262 (751)
T 2xe4_A 194 DMSGNEVYTIEFKRISD--PSQ--TIADKV---SGTNGEIVWGPDHTSLFYVTKDETLR----ENKVWRHVMGKLQSEDV 262 (751)
T ss_dssp ESSSSSCEEEEEEETTC--TTC--CCCCCE---EEECSCCEECSSTTEEEEEEECTTCC----EEEEEEEETTSCGGGCE
T ss_pred eCCCCceEEEEEEECCC--CCE--eCCccc---cCceeeEEEecCCCEEEEEEECCCCC----CCEEEEEECCCCchhcE
Confidence 7654 599999998 6 5 232210 12346899999999999998754222 36899999988753 3
Q ss_pred Eeee--CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeee-eEEecCCCCCccccccCceeCCC---
Q 004816 235 VLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYK-RVCVAGFDPTIVESPTEPKWSSK--- 308 (729)
Q Consensus 235 ~lt~--~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~-~~~~~~~~~~~~~~~~~~~wspD--- 308 (729)
.+.. +..+..++.|||||++|+|..... ...+||++|++ ++.... .+.+.... ..+.|++|
T Consensus 263 lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~-----~~~~l~~~d~~-~~~~~~~~~~l~~~~-------~~~~~s~~~~~ 329 (751)
T 2xe4_A 263 CLYEEHNPLFSAFMYKAADTNTLCIGSQSP-----ETAEVHLLDLR-KGNAHNTLEIVRPRE-------KGVRYDVQMHG 329 (751)
T ss_dssp EEEECCCTTCEEEEEECTTSSEEEEEEECS-----SCEEEEEEESS-SCTTCCCEEESSCCC-------TTCCEEEEEET
T ss_pred EEEecCCCceEEEEEECCCCCEEEEEecCC-----CCceEEEEECC-CCCCCceeEEeecCC-------CCceEEEeeee
Confidence 4433 334667899999999999998543 35789999998 542111 13332222 23456565
Q ss_pred Cc-EEEEEecC-CCceEEEEEEcCC-CeEEE-eeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEE
Q 004816 309 GE-LFFVTDRK-NGFWNLHKWIESN-NEVLA-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 384 (729)
Q Consensus 309 G~-l~~~~~~~-~g~~~l~~~d~~~-g~~~~-l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d 384 (729)
|+ |+|.++.. .+..+|+++++++ ++.+. |+....+..-. ++.+ .++.|++...++|..+|++++
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~-------~~~~-----~~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFME-------SIAV-----RSNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEE-------EEEE-----CSSEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEE-------EEEE-----ECCEEEEEEEeCCEEEEEEEe
Confidence 77 99998873 4678999999876 45555 55433221111 2222 567899999999999999999
Q ss_pred C-------CCCc-eEeeccCCc-ceEEe------eeeCCEEEEEEeCCCCCceEEEEEcCCCcceeeeeeEEecCCCCCc
Q 004816 385 D-------FGHS-LSLLDIPFT-DIDNI------TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTL 449 (729)
Q Consensus 385 ~-------~~g~-~~~lt~~~~-~v~~~------~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt~~~~~~~~~~~~ 449 (729)
+ ++++ .+.|+.+.. .+..+ ..+++.+++..++...|.++|.+++++++.+.|++..+ ...
T Consensus 398 l~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~-----~~~ 472 (751)
T 2xe4_A 398 ADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREV-----GGG 472 (751)
T ss_dssp CCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCC-----CTT
T ss_pred cccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEecccc-----ccC
Confidence 6 6777 788865433 23344 23567889999999999999999999888766553211 112
Q ss_pred cCCCCCCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecC
Q 004816 450 KYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNY 529 (729)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~ 529 (729)
++...+ .++.+.+.+. ||..++++++.|++.. +.++.|+||++||+++......|....+.|+++||+|+.+|+
T Consensus 473 ~~~~~~-~~~~~~~~s~-dG~~i~~~l~~p~~~~----~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 546 (751)
T 2xe4_A 473 FDAANY-KVERRFATAP-DQTKIPLSVVYHKDLD----MSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHI 546 (751)
T ss_dssp CCGGGE-EEEEEEEECT-TCCEEEEEEEEETTSC----TTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECC
T ss_pred CCccce-EEEEEEEECC-CCcEEEEEEEcCCCCC----CCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEee
Confidence 333333 4788999988 9999999999997632 246789999999998877777788788899999999999999
Q ss_pred CCCCCCchhHHH-hhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccCh
Q 004816 530 GGSTGYGREFRE-RLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADL 607 (729)
Q Consensus 530 rGs~g~g~~~~~-~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~ 607 (729)
||++++|+.|.. .....++...++|+.+++++|++++.+|++||+|+|+|+||++++.++. +|++|+++|+.+|+.|+
T Consensus 547 RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~ 626 (751)
T 2xe4_A 547 RGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDV 626 (751)
T ss_dssp TTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCH
T ss_pred CCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchH
Confidence 999999999998 7777777788999999999999999999999999999999999999998 89999999999999998
Q ss_pred hHHhhhc--chhhhhhhhhhcC---Ch---hhhhhcCcccccCCCCCC-EEEEEeCCCCCCChHHHHHHHHHHHhCC---
Q 004816 608 SMLRAET--HKFESRYIDNLVG---SE---KDYYEKSPINFVDKFSCP-IILFQGLEDKVVPPDQARKIYKALKENG--- 675 (729)
Q Consensus 608 ~~~~~~~--~~~~~~~~~~~~~---~~---~~~~~~sp~~~~~~i~~P-vL~i~G~~D~~vp~~~~~~~~~~l~~~g--- 675 (729)
..+.... ......+ ..++ ++ +.+...+|+.+++++++| +|++||++|.+||+.++.+++++|+.++
T Consensus 627 ~~~~~~~~~~~~~~~~--~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~ 704 (751)
T 2xe4_A 627 MTTMCDPSIPLTTGEW--EEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDN 704 (751)
T ss_dssp HHHHTCTTSTTHHHHT--TTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSC
T ss_pred HhhhcccCcccchhhH--HHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 7653211 1111111 1122 22 245678999999999997 9999999999999999999999999984
Q ss_pred CCEEEEEECCCCcccCCcc-cHHHHHHHHHHHHHHHhC
Q 004816 676 LPVALVEYEGEQHGFRKAE-NIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 676 ~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~fl~~~l~ 712 (729)
..+.+++++++||++.... ...+.++.+++||.++|+
T Consensus 705 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~ 742 (751)
T 2xe4_A 705 NEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLK 742 (751)
T ss_dssp CCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhC
Confidence 4567778899999986543 455677789999999997
No 8
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=3.4e-50 Score=466.94 Aligned_cols=583 Identities=16% Similarity=0.136 Sum_probs=418.0
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCC----C
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD----Q 165 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~ 165 (729)
....|... |+++||+..+.. ..+..||+.+.. +++.+.|++...-....-...+...|+++++.|+|..... .
T Consensus 71 ~~~~p~~d-G~~~~~~~~~~~-~~~~~l~~~~~~-~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~ 147 (695)
T 2bkl_A 71 SVSTPSRR-NGRFFYVRTHKD-KEKAILYWRQGE-SGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEA 147 (695)
T ss_dssp EECCCEEE-TTEEEEEEECTT-CSSCEEEEEEST-TSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCC
T ss_pred cCCCCEEE-CCEEEEEEEcCC-CeEEEEEEEcCC-CCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceE
Confidence 44455533 999999987542 346688988765 2466777653210000001223445666677899887644 3
Q ss_pred cEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCC----CCCcceEEEEEEcCCCce--EEeeeC
Q 004816 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD----ALNSTTEIVAIALNGQNI--QVLVSG 239 (729)
Q Consensus 166 ~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~----~~~~~~~l~~~dl~~g~~--~~lt~~ 239 (729)
+|+++|+++ ++..+..... ...+..++|||||+.|+|++.+.... ......+||++++.+++. +.+...
T Consensus 148 ~i~v~dl~t--g~~~~~~~~~---~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~ 222 (695)
T 2bkl_A 148 VLHVIDVDS--GEWSKVDVIE---GGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER 222 (695)
T ss_dssp EEEEEETTT--CCBCSSCCBS---CCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC
T ss_pred EEEEEECCC--CCCcCCcccC---cccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec
Confidence 799999998 6544111110 11236789999999999998754310 012346799999998763 445433
Q ss_pred ---CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEe
Q 004816 240 ---SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTD 316 (729)
Q Consensus 240 ---~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~ 316 (729)
.....++.|||||++|++.+.+.. ...+||+++.. +++. ..+....+ ....+.| +||++++.++
T Consensus 223 ~~~~~~~~~~~~SpDG~~l~~~~~~~~----~~~~l~~~~~~-~~~~--~~l~~~~~-----~~~~~~~-~~g~l~~~s~ 289 (695)
T 2bkl_A 223 TGDPTTFLQSDLSRDGKYLFVYILRGW----SENDVYWKRPG-EKDF--RLLVKGVG-----AKYEVHA-WKDRFYVLTD 289 (695)
T ss_dssp CCCTTCEEEEEECTTSCCEEEEEEETT----TEEEEEEECTT-CSSC--EEEEECSS-----CCEEEEE-ETTEEEEEEC
T ss_pred CCCCEEEEEEEECCCCCEEEEEEeCCC----CceEEEEEcCC-CCce--EEeecCCC-----ceEEEEe-cCCcEEEEEC
Confidence 245678999999999999886542 24679999765 5554 33443332 2244566 6766666666
Q ss_pred cCCCceEEEEEEcCCCe---EEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEee
Q 004816 317 RKNGFWNLHKWIESNNE---VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 393 (729)
Q Consensus 317 ~~~g~~~l~~~d~~~g~---~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~l 393 (729)
...+...|+++|+++++ .+.|+.... .+. ..++.+ .++.++++...++..+|+.++++++..+.|
T Consensus 290 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-----~~~--l~~~~~-----~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 290 EGAPRQRVFEVDPAKPARASWKEIVPEDS-----SAS--LLSVSI-----VGGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp TTCTTCEEEEEBTTBCSGGGCEEEECCCS-----SCE--EEEEEE-----ETTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred CCCCCCEEEEEeCCCCCccCCeEEecCCC-----CCe--EEEEEE-----ECCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 53457899999998775 366664321 111 012333 345788899999999999999987777777
Q ss_pred ccC-CcceEEe--eeeCCEEEEEEeCCCCCceEEEEEcCCCcceeeeeeEEecCCCCCccCCCCCCCcEEEEeeccCCCe
Q 004816 394 DIP-FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTEVPGQ 470 (729)
Q Consensus 394 t~~-~~~v~~~--~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~ 470 (729)
..+ ...+..+ +++++.+++..++..+|.++|++|+++++.+.|++ .. ..++... ..++.+.+.+. +|.
T Consensus 358 ~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~------~~-~~~~~~~-~~~~~~~~~~~-dg~ 428 (695)
T 2bkl_A 358 QLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAK------VD-VPMNPEQ-YQVEQVFYASK-DGT 428 (695)
T ss_dssp CCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEE------CC-CSSCGGG-EEEEEEEEECT-TSC
T ss_pred cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEec------CC-CCCCHHH-CeEEEEEEECC-CCC
Confidence 654 3344444 45677899999999999999999999988655542 11 1133332 36788999987 999
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcc
Q 004816 471 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIV 550 (729)
Q Consensus 471 ~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~ 550 (729)
.++++++.|++.. ..++.|+||++||+++......|....+.|+++||.|+.+|+||++++|..|.......++..
T Consensus 429 ~i~~~~~~p~~~~----~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~ 504 (695)
T 2bkl_A 429 KVPMFVVHRKDLK----RDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQN 504 (695)
T ss_dssp EEEEEEEEETTCC----CSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHH
T ss_pred EEEEEEEECCCCC----CCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCC
Confidence 9999999998632 256789999999998887777788778889999999999999999999999988777667777
Q ss_pred cHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcC--
Q 004816 551 DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVG-- 627 (729)
Q Consensus 551 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~-- 627 (729)
.++|+.+++++|++++.+|++||+|+|+|+||++++.++. +|++|+++|+.+|+.++..+..... ...+.. .++
T Consensus 505 ~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~--~~~~~~-~~g~~ 581 (695)
T 2bkl_A 505 VFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGS--GRTWIP-EYGTA 581 (695)
T ss_dssp HHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTT--GGGGHH-HHCCT
T ss_pred cHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCC--CcchHH-HhCCC
Confidence 7999999999999999999999999999999999999998 8999999999999998765432110 011111 112
Q ss_pred -Ch---hhhhhcCcccccCCCC--CCEEEEEeCCCCCCChHHHHHHHHHHHh---CCCCEEEEEECCCCcccCCc-ccHH
Q 004816 628 -SE---KDYYEKSPINFVDKFS--CPIILFQGLEDKVVPPDQARKIYKALKE---NGLPVALVEYEGEQHGFRKA-ENIK 697 (729)
Q Consensus 628 -~~---~~~~~~sp~~~~~~i~--~PvL~i~G~~D~~vp~~~~~~~~~~l~~---~g~~~~~~~~~~~gH~~~~~-~~~~ 697 (729)
++ +.+...+|+.++++++ +|+|++||++|.+||+.++.+++++|++ .|.++++++++++||++..+ ....
T Consensus 582 ~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 661 (695)
T 2bkl_A 582 EKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAI 661 (695)
T ss_dssp TSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHH
T ss_pred CCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHH
Confidence 22 3456789999999876 6999999999999999999999999998 67899999999999998653 4566
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCC
Q 004816 698 FTLEQQMVFFARVVGHFDVADEII 721 (729)
Q Consensus 698 ~~~~~~~~fl~~~l~~~~~~~~~~ 721 (729)
+.++.+++||.++|+..+.+..++
T Consensus 662 ~~~~~~~~fl~~~l~~~~~~~~~~ 685 (695)
T 2bkl_A 662 ESSVDLYSFLFQVLDVQGAQGGVA 685 (695)
T ss_dssp HHHHHHHHHHHHHTTC--------
T ss_pred HHHHHHHHHHHHHcCCCCCCcchh
Confidence 788899999999998655554444
No 9
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=8.5e-51 Score=475.25 Aligned_cols=588 Identities=13% Similarity=0.114 Sum_probs=413.1
Q ss_pred CCcCCHHHHhcc--CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEE
Q 004816 76 KSPLTADVVSGA--SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRI 152 (729)
Q Consensus 76 ~~~lt~e~i~~~--~~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (729)
..++|+++++.. .....++.|+| |+.+ +. . .+|. ++.++..+ |+.+.++... .... .......|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~~-~~-~---~dg~--i~~~d~~~-g~~~~~~~~~-~~~~--~~v~~~~~Sp 70 (723)
T 1xfd_A 2 KKKVTVEDLFSEDFKIHDPEAKWISDTEFI-YR-E---QKGT--VRLWNVET-NTSTVLIEGK-KIES--LRAIRYEISP 70 (723)
T ss_dssp CCCCCHHHHTCTTTCCCCCCCCBSSSSCBC-CC-C---SSSC--EEEBCGGG-CCCEEEECTT-TTTT--TTCSEEEECT
T ss_pred CccccHHHHhCCCCcccccccEEcCCCcEE-EE-e---CCCC--EEEEECCC-CcEEEEeccc-cccc--cccceEEECC
Confidence 467999999887 22357899999 6633 32 1 2444 45555542 3555555332 1000 0011234555
Q ss_pred ECCEEEEEECC--------CCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEE
Q 004816 153 FGDTVIFSNYK--------DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (729)
Q Consensus 153 ~~~~i~~~~~~--------~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~ 224 (729)
+++.|++.... .++||++|+++ ++.++|+..... ...+..++|||||++|+|++. .+||
T Consensus 71 Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~--~~~~~l~~~~~~-~~~~~~~~~SPdG~~la~~~~----------~~i~ 137 (723)
T 1xfd_A 71 DREYALFSYNVEPIYQHSYTGYYVLSKIPH--GDPQSLDPPEVS-NAKLQYAGWGPKGQQLIFIFE----------NNIY 137 (723)
T ss_dssp TSSEEEEEESCCCCSSSCCCSEEEEEESSS--CCCEECCCTTCC-SCCCSBCCBCSSTTCEEEEET----------TEEE
T ss_pred CCCEEEEEecCccceeecceeeEEEEECCC--CceEeccCCccc-cccccccEECCCCCEEEEEEC----------CeEE
Confidence 56688888653 26899999998 777778764211 123577899999999999975 3699
Q ss_pred EEEcCCCceEEeeeCCC-------------------eeeeeeeCCCCCeEEEEEecCCCC--------------------
Q 004816 225 AIALNGQNIQVLVSGSD-------------------FYAFPRMDPRGERMAWIEWHHPNM-------------------- 265 (729)
Q Consensus 225 ~~dl~~g~~~~lt~~~~-------------------~~~~~~~SPDG~~la~~~~~~~~~-------------------- 265 (729)
++++++++.++++.... ....++|||||++|+|.+.+....
T Consensus 138 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (723)
T 1xfd_A 138 YCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYH 217 (723)
T ss_dssp EESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEE
T ss_pred EEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceecc
Confidence 99999999888876421 125699999999999998654211
Q ss_pred ------CCCCcEEEEEEecCCCCeeeeEEecCCCC--CccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEE
Q 004816 266 ------PWDKAELWVGYISENGDVYKRVCVAGFDP--TIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLA 336 (729)
Q Consensus 266 ------~~~~~~l~~~d~~~~g~~~~~~~~~~~~~--~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~ 336 (729)
.....+|+++|++ +++. ...+..... .....+..+.|||||+ +++..++..+...|+++|+++++.+.
T Consensus 218 ~~~~G~~~~~~~l~~~d~~-~~~~--~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 294 (723)
T 1xfd_A 218 YPKAGSENPSISLHVIGLN-GPTH--DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK 294 (723)
T ss_dssp CCBTTSCCCEEEEEEEESS-SSCC--CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE
T ss_pred CCCCCCCCCeeEEEEEECC-CCce--eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE
Confidence 1113479999998 6653 122222100 0004556789999999 65555553456789999999998777
Q ss_pred eeccC--ccc----cCCcccccCcceeeeeecCCCCEEEEE-EEECC----eEEEEEEE-CCCCc---eEeeccCCcceE
Q 004816 337 IYSLD--AEF----SRPLWVFGINSYEIIQSHGEKNLIACS-YRQNG----RSYLGILD-DFGHS---LSLLDIPFTDID 401 (729)
Q Consensus 337 l~~~~--~~~----~~~~w~~~~~~~~~l~~~~~~~~l~~~-s~~~g----~~~ly~~d-~~~g~---~~~lt~~~~~v~ 401 (729)
+.... ..+ ..+.|++ |++.|++. +++++ ..+||+++ .++++ .++|+.+.+.+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~sp------------dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~ 362 (723)
T 1xfd_A 295 KHEDESEAWLHRQNEEPVFSK------------DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVT 362 (723)
T ss_dssp EEEEECSSCCCCCCCCCEECT------------TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEE
T ss_pred EEEeccCCEEeccCCCceEcC------------CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEE
Confidence 65321 111 2455554 78888886 66777 88999999 67777 788887666654
Q ss_pred E---eeeeCCEEEEEEeCCC--CCceEEEEEcCCC-cceeeee---------eEEecCCCC-------------------
Q 004816 402 N---ITLGNDCLFVEGASGV--EPSSVAKVTLDDH-KLKAVDF---------KVVWSSSPD------------------- 447 (729)
Q Consensus 402 ~---~~~~~~~~~~~~~~~~--~~~~ly~~d~~~~-~~~~lt~---------~~~~~~~~~------------------- 447 (729)
. ++++++.+++ .++.+ ....||.++++++ +.+.|+. ...++....
T Consensus 363 ~~~~~spdg~~l~~-~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~ 441 (723)
T 1xfd_A 363 KILAYDEKGNKIYF-LSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNT 441 (723)
T ss_dssp EEEEEETTTTEEEE-EESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEET
T ss_pred eeeEEcCCCCEEEE-EEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEEC
Confidence 3 2455555554 44444 3455888887664 3444431 122222110
Q ss_pred ---C--c-----------cCCCCCCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCc-c--c
Q 004816 448 ---T--L-----------KYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA-R--G 508 (729)
Q Consensus 448 ---~--~-----------~~~~~~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~-~--~ 508 (729)
. . +....+..++.+.+.+. +| ++.++++.|++.. +.+++|+||++||+++... . +
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g-~l~~~~~~P~~~~----~~~~~p~vv~~HG~~~~~~~~~~~ 515 (723)
T 1xfd_A 442 TDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEID-DY-NLPMQILKPATFT----DTTHYPLLLVVDGTPGSQSVAEKF 515 (723)
T ss_dssp TTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEET-TE-EECCBEEBCSSCC----SSSCEEEEEECCCCTTCCCCCCCC
T ss_pred CCCCEEEEeccChhhhhhhhhccCCCceEEEEEcC-Cc-eEEEEEEeCCCCC----CCCccCEEEEEcCCCCccccCccc
Confidence 0 0 01123445667777776 77 9999999998732 3567899999999987632 2 2
Q ss_pred cchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHH
Q 004816 509 ILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAA 588 (729)
Q Consensus 509 ~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~ 588 (729)
.+....+.++++||.|+++|+||++++|..+.......++...++|+.+++++|.+++.+|.+||+|+|||+||++++.+
T Consensus 516 ~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 595 (723)
T 1xfd_A 516 EVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYI 595 (723)
T ss_dssp CCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHC
T ss_pred cccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHH
Confidence 33356677888999999999999999999988877777877789999999999999887889999999999999999999
Q ss_pred Hh-C----CCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCC-CCEEEEEeCCCCCCChH
Q 004816 589 LA-F----RDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFS-CPIILFQGLEDKVVPPD 662 (729)
Q Consensus 589 ~~-~----~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~-~PvL~i~G~~D~~vp~~ 662 (729)
+. + |++|+++|+.+|+.++..+.. .+...++.......+.+...+|..++.+++ +|+|++||++|.++|++
T Consensus 596 a~~~~~~~p~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~ 672 (723)
T 1xfd_A 596 LPAKGENQGQTFTCGSALSPITDFKLYAS---AFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQ 672 (723)
T ss_dssp CCCSSSTTCCCCSEEEEESCCCCTTSSBH---HHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHH
T ss_pred HHhccccCCCeEEEEEEccCCcchHHhhh---hccHhhcCCccCChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHh
Confidence 98 7 899999999999988754311 111222222222345566778888899999 79999999999999999
Q ss_pred HHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 663 QARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 663 ~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
++.+++++|+.+|++++++++|+++|.+...+...+.++.+++||.++|+
T Consensus 673 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 673 HTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp HHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999986677788999999999998875
No 10
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=1.8e-49 Score=464.13 Aligned_cols=575 Identities=16% Similarity=0.166 Sum_probs=410.9
Q ss_pred cCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCC--CCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCC--
Q 004816 91 LGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKA--GDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQ-- 165 (729)
Q Consensus 91 ~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~--~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-- 165 (729)
...|. | |+++||+..+.. ..+..||+.+... +++.+.|++...-....-...+...|+++++.|+|.....|
T Consensus 111 ~~~p~--pdG~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e 187 (741)
T 1yr2_A 111 FGLPQ--RRGASVFYSWNSGL-MNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSD 187 (741)
T ss_dssp ECCCE--EETTEEEEEEECSS-CSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCS
T ss_pred cCCCE--EECCEEEEEEEcCC-CeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCc
Confidence 34444 6 999999987543 3356889887540 23566665422000000012234456666778999876544
Q ss_pred --cEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCC-----CCCCcceEEEEEEcCCCce--EEe
Q 004816 166 --RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ-----DALNSTTEIVAIALNGQNI--QVL 236 (729)
Q Consensus 166 --~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~-----~~~~~~~~l~~~dl~~g~~--~~l 236 (729)
+||++|+++ ++....+.. ...+..++|||| +.|+|++.+... .......+||++++.++.. +.+
T Consensus 188 ~~~i~v~dl~t--g~~~~~~~~----~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv 260 (741)
T 1yr2_A 188 WRTVKFVGVAD--GKPLADELK----WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPV 260 (741)
T ss_dssp EEEEEEEETTT--CCEEEEEEE----EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEE
T ss_pred eEEEEEEECCC--CCCCCccCC----CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEE
Confidence 699999998 766554322 233468899999 999999865431 0111236799999988763 344
Q ss_pred eeCC---CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCee-eeEEecCCCCCccccccCceeCCCCc-E
Q 004816 237 VSGS---DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVY-KRVCVAGFDPTIVESPTEPKWSSKGE-L 311 (729)
Q Consensus 237 t~~~---~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~-~~~~~~~~~~~~~~~~~~~~wspDG~-l 311 (729)
.... .+..++.|||||++|++...+... ...+||++|++ ++... ...+....+ ....+ |+|||+ |
T Consensus 261 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~---~~~~l~~~d~~-~~~~~~~~~l~~~~~-----~~~~~-~~~dg~~l 330 (741)
T 1yr2_A 261 FATPELPKRGHGASVSSDGRWVVITSSEGTD---PVNTVHVARVT-NGKIGPVTALIPDLK-----AQWDF-VDGVGDQL 330 (741)
T ss_dssp ECCTTCTTCEEEEEECTTSCEEEEEEECTTC---SCCEEEEEEEE-TTEECCCEEEECSSS-----SCEEE-EEEETTEE
T ss_pred eccCCCCeEEEEEEECCCCCEEEEEEEccCC---CcceEEEEECC-CCCCcccEEecCCCC-----ceEEE-EeccCCEE
Confidence 4432 246789999999999998865422 25689999998 66221 234444332 22233 458998 8
Q ss_pred EEEEecCCCceEEEEEEcCC--CeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCc
Q 004816 312 FFVTDRKNGFWNLHKWIESN--NEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 389 (729)
Q Consensus 312 ~~~~~~~~g~~~l~~~d~~~--g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~ 389 (729)
++.++......+|+++|+++ ++.+.|++..... ..++.+ .++.++++..+++..+||+++++++.
T Consensus 331 ~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~--------l~~~~~-----~~~~lv~~~~~dg~~~l~~~~~~g~~ 397 (741)
T 1yr2_A 331 WFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDN--------LESVGI-----AGNRLFASYIHDAKSQVLAFDLDGKP 397 (741)
T ss_dssp EEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSE--------EEEEEE-----EBTEEEEEEEETTEEEEEEEETTSCE
T ss_pred EEEECCCCCCCEEEEEeCCCCccccEEEecCCCCe--------EEEEEE-----ECCEEEEEEEECCEEEEEEEeCCCCc
Confidence 88887634478899999988 4667777433111 112233 35678999999999999999998887
Q ss_pred eEeeccC-CcceEEe--eeeCCEEEEEEeCCCCCceEEEEEcCCCcceeeeeeEEecCCCCCccCCCCCCCcEEEEeecc
Q 004816 390 LSLLDIP-FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTE 466 (729)
Q Consensus 390 ~~~lt~~-~~~v~~~--~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (729)
.+.|+.+ ...+..+ +.+++.+++..++..+|.++|++|+++++.+.|+ . ....++... ...+.+.+.+.
T Consensus 398 ~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~------~-~~~~~~~~~-~~~~~~~~~~~ 469 (741)
T 1yr2_A 398 AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWE------P-VHLTFDPAD-FRVEQVFYPSK 469 (741)
T ss_dssp EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECS------C-CCCSSCGGG-EEEEEEEEECT
T ss_pred eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe------c-CCCCCChhH-CEEEEEEEEcC
Confidence 7888754 3445555 4567788999999999999999999988754443 2 122233333 36788999987
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccC
Q 004816 467 VPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGR 546 (729)
Q Consensus 467 ~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~ 546 (729)
||..++++++.|++. .++.|+||++||+++....+.|....+.|+++||.|+++|+||++++|+.|.......
T Consensus 470 -dg~~i~~~~~~p~~~------~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~ 542 (741)
T 1yr2_A 470 -DGTKVPMFIVRRKDA------KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRD 542 (741)
T ss_dssp -TSCEEEEEEEEETTC------CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGG
T ss_pred -CCCEEEEEEEecCCC------CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhh
Confidence 999999999999762 3467999999999887777778877888999999999999999999999999877766
Q ss_pred CCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhh
Q 004816 547 WGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNL 625 (729)
Q Consensus 547 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~ 625 (729)
++...++|+.+++++|++++.+|++||+|+|+|+||++++.++. +|++|+++|+.+|+.++..+..... ...+. ..
T Consensus 543 ~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~--~~~~~-~~ 619 (741)
T 1yr2_A 543 KKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTA--GRYWV-DD 619 (741)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTT--GGGGH-HH
T ss_pred cCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCC--CchhH-HH
Confidence 77777999999999999998899999999999999999999998 8999999999999998765432111 00011 11
Q ss_pred cCC------hhhhhhcCcccccCC-CCC-CEEEEEeCCCCCCChHHHHHHHHHHHh---CCCCEEEEEECCCCcccCCc-
Q 004816 626 VGS------EKDYYEKSPINFVDK-FSC-PIILFQGLEDKVVPPDQARKIYKALKE---NGLPVALVEYEGEQHGFRKA- 693 (729)
Q Consensus 626 ~~~------~~~~~~~sp~~~~~~-i~~-PvL~i~G~~D~~vp~~~~~~~~~~l~~---~g~~~~~~~~~~~gH~~~~~- 693 (729)
+++ .+.+...+|+.++.+ +++ |+|++||++|.+||+.++.+++++|+. .|.++++++++++||++..+
T Consensus 620 ~g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~ 699 (741)
T 1yr2_A 620 YGYPEKEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPI 699 (741)
T ss_dssp HCCTTSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CH
T ss_pred cCCCCCHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCH
Confidence 121 234567899999997 885 999999999999999999999999999 88999999999999998654
Q ss_pred ccHHHHHHHHHHHHHHHhCCCCC
Q 004816 694 ENIKFTLEQQMVFFARVVGHFDV 716 (729)
Q Consensus 694 ~~~~~~~~~~~~fl~~~l~~~~~ 716 (729)
....+..+.+++||.++++..+.
T Consensus 700 ~~~~~~~~~~~~fl~~~l~~~~~ 722 (741)
T 1yr2_A 700 DKQIEETADVQAFLAHFTGLTPR 722 (741)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCcc
Confidence 34467889999999999984443
No 11
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=3.1e-49 Score=460.68 Aligned_cols=566 Identities=16% Similarity=0.156 Sum_probs=414.6
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEEE
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYK 169 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~ 169 (729)
.+..+.|||++.+++... +. ++.++.. +++.+.++..... .....|+++++.|+|.. +++||+
T Consensus 83 ~v~~~~~spd~~~~~~~~-----~~--i~~~d~~-~~~~~~l~~~~~~-------~~~~~~SpdG~~la~~~--~~~i~v 145 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFTQ-----GG--LVGFDML-ARKVTYLFDTNEE-------TASLDFSPVGDRVAYVR--NHNLYI 145 (706)
T ss_dssp CCEEEEETTTTEEEEEET-----TE--EEEEETT-TTEEEEEECCTTC-------CTTCEECTTSSEEEEEE--TTEEEE
T ss_pred CceeEEECCCCeEEEEEC-----CE--EEEEECC-CCceEEccCCccc-------ccCCcCCCCCCEEEEEE--CCeEEE
Confidence 467899999755555531 44 4444444 2344555432211 12345777777888874 578999
Q ss_pred EeCCC-----CCCCCeecCCCCCCC-----------ceeeecceecCCCCEEEEEEeccCCC------------------
Q 004816 170 HSIDS-----KDSSPLPITPDYGEP-----------LVSYADGIFDPRFNRYVTVREDRRQD------------------ 215 (729)
Q Consensus 170 ~d~~~-----~~~~~~~lt~~~~~~-----------~~~~~~~~~SPdG~~l~~~~~~~~~~------------------ 215 (729)
+++.+ + +.++++...... ..+...+.|||||++|++.+.+....
T Consensus 146 ~~~~~~~~~~g--~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 223 (706)
T 2z3z_A 146 ARGGKLGEGMS--RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL 223 (706)
T ss_dssp EECBCTTSCCC--CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEE
T ss_pred EecCcccccCC--CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEe
Confidence 99975 3 355666542110 00136788999999999987432100
Q ss_pred ------CCCcceEEEEEEcCCCceEEeeeC---CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCC-Ceee
Q 004816 216 ------ALNSTTEIVAIALNGQNIQVLVSG---SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENG-DVYK 285 (729)
Q Consensus 216 ------~~~~~~~l~~~dl~~g~~~~lt~~---~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g-~~~~ 285 (729)
.......|+++|+++++.+.+..+ ......+.|||||++|++...++.. ....|+++|++ +| ...
T Consensus 224 ~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~---~~~~v~~~d~~-~g~~~~- 298 (706)
T 2z3z_A 224 YYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ---NECKVNAYDAE-TGRFVR- 298 (706)
T ss_dssp CCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS---CEEEEEEEETT-TCCEEE-
T ss_pred eCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC---CeeEEEEEECC-CCceee-
Confidence 011246899999999988777643 2345678999999999998765433 34679999998 67 432
Q ss_pred eEEecCCCCCccccccCceeCC--CCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccC-CcccccCcceeeeeec
Q 004816 286 RVCVAGFDPTIVESPTEPKWSS--KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSR-PLWVFGINSYEIIQSH 362 (729)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~wsp--DG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~-~~w~~~~~~~~~l~~~ 362 (729)
.+.......|......+.|+| ||++++.+.. .+..+||.++.+++..+.|+.....+.. ..|++
T Consensus 299 -~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~-~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~sp----------- 365 (706)
T 2z3z_A 299 -TLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR-DGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDP----------- 365 (706)
T ss_dssp -EEEEEECSSCCCCCSCCEECTTCSSEEEEEECT-TSSCEEEEEETTSCEEEECCCSSSCEEEEEEECT-----------
T ss_pred -EEEEccCCCeECccCCceeecCCCCEEEEEEcc-CCccEEEEEECCCCEEEecCCCCeEEEeeeEEcC-----------
Confidence 222222112212235789999 9996677766 6788999999888888888754433332 34554
Q ss_pred CCCCEEEEEEEECC--eEEEEEEECCCCceEeeccCCcceEEe--eeeCCEEEEEEeCCCCCceEEEEEcCCCcceeeee
Q 004816 363 GEKNLIACSYRQNG--RSYLGILDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDF 438 (729)
Q Consensus 363 ~~~~~l~~~s~~~g--~~~ly~~d~~~g~~~~lt~~~~~v~~~--~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt~ 438 (729)
+++.|++.+..++ ..+||.+++++++.+.|+... .+..+ +++++.+++..++...|.++|++++++++.+.++
T Consensus 366 -dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~~~~~- 442 (706)
T 2z3z_A 366 -KGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPES-GMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLE- 442 (706)
T ss_dssp -TSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSS-SEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEEEEEE-
T ss_pred -CCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCC-ceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeEeecc-
Confidence 7888888887665 579999999999888887533 34444 5667778888888889999999999888732222
Q ss_pred eEEecCCCCCccCCCCCCCcEEEEeeccCCC-eEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcc-ccchh----
Q 004816 439 KVVWSSSPDTLKYKSYFSLPELIEFPTEVPG-QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR-GILNL---- 512 (729)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG-~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~---- 512 (729)
... .+....+..++.+.+... +| ..++++++.|++.. +++++|+||++||+++.... ..|..
T Consensus 443 -----~~~--~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~P~~~~----~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~ 510 (706)
T 2z3z_A 443 -----AKN--PDTGYAMPEIRTGTIMAA-DGQTPLYYKLTMPLHFD----PAKKYPVIVYVYGGPHAQLVTKTWRSSVGG 510 (706)
T ss_dssp -----CC--------CCCCEEEEEEECT-TSSSEEEEEEECCTTCC----TTSCEEEEEECCCCTTCCCCCSCC----CC
T ss_pred -----ccc--hhhhcCCCCcEEEEEEcC-CCCEEEEEEEEeCCCCC----CCCCccEEEEecCCCCceeeccccccCchH
Confidence 111 233345667788999987 88 89999999998732 24678999999998776532 23433
Q ss_pred hhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C
Q 004816 513 SIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F 591 (729)
Q Consensus 513 ~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~ 591 (729)
+++.|+++||.|+++|+||+++++..+.......++..+++|+.+++++|.+++.+|.+|++|+|||+||++++.++. +
T Consensus 511 ~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 590 (706)
T 2z3z_A 511 WDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTH 590 (706)
T ss_dssp HHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS
T ss_pred HHHHHHhCCcEEEEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhC
Confidence 678999999999999999999999998887778888788999999999999888888999999999999999999998 9
Q ss_pred CCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHH
Q 004816 592 RDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKAL 671 (729)
Q Consensus 592 ~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l 671 (729)
|++|+++|+.+|+.++..+.. .+...++.....+.+.|...+|...+.++++|+|++||++|.+||++++++++++|
T Consensus 591 p~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l 667 (706)
T 2z3z_A 591 GDVFKVGVAGGPVIDWNRYAI---MYGERYFDAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDAC 667 (706)
T ss_dssp TTTEEEEEEESCCCCGGGSBH---HHHHHHHCCTTTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHH
T ss_pred CCcEEEEEEcCCccchHHHHh---hhhhhhcCCcccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHH
Confidence 999999999999988754321 12223333333356778888999999999999999999999999999999999999
Q ss_pred HhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 672 KENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 672 ~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
+.++++++++++|+++|.+... ...+.++.+.+||.++|
T Consensus 668 ~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 668 VKARTYPDYYVYPSHEHNVMGP-DRVHLYETITRYFTDHL 706 (706)
T ss_dssp HHHTCCCEEEEETTCCSSCCTT-HHHHHHHHHHHHHHHHC
T ss_pred HHCCCCeEEEEeCCCCCCCCcc-cHHHHHHHHHHHHHHhC
Confidence 9999999999999999998655 67789999999999875
No 12
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=7e-49 Score=458.67 Aligned_cols=567 Identities=14% Similarity=0.129 Sum_probs=404.9
Q ss_pred cCceEEcC-CCcEEEEeecCCC---CCceEEEEcCCCCCCCC---cccCCCCCcccccccccCCceEEEECCEEEEEECC
Q 004816 91 LGGTAVDG-HGRLIWLESRPTE---AGRGVLVKEPAKAGDEP---SDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYK 163 (729)
Q Consensus 91 ~~~~~~~p-g~~~~~~~~~~~~---~~~~~l~~~~~~~~g~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 163 (729)
+..+.||| |+.++|...+... .....|+.++..+ |+. +.+. . ......|+++++.|+|..
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~-g~~~~~~~l~-~---------~~~~~~~SPDG~~la~~~-- 128 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN-GEFVRGNELP-R---------PIQYLCWSPVGSKLAYVY-- 128 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT-TEECCSSCCC-S---------SBCCEEECSSTTCEEEEE--
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC-CccccceecC-c---------ccccceECCCCCEEEEEE--
Confidence 67899999 8999888653210 0123455555552 233 2232 1 112356777788999985
Q ss_pred CCcEEEEeCCCCCCCCeecCCCCCCCc---------------eeeecceecCCCCEEEEEEeccCCC-------------
Q 004816 164 DQRLYKHSIDSKDSSPLPITPDYGEPL---------------VSYADGIFDPRFNRYVTVREDRRQD------------- 215 (729)
Q Consensus 164 ~~~l~~~d~~~~~~~~~~lt~~~~~~~---------------~~~~~~~~SPdG~~l~~~~~~~~~~------------- 215 (729)
+++||++++.+ ++.++++....... .+...+.|||||++|+|.+.+....
T Consensus 129 ~~~i~~~~~~~--g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~ 206 (719)
T 1z68_A 129 QNNIYLKQRPG--DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQY 206 (719)
T ss_dssp TTEEEEESSTT--SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSS
T ss_pred CCeEEEEeCCC--CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCC
Confidence 56899999998 78888875421100 0114789999999999987653210
Q ss_pred ------------CCCcceEEEEEEcCCCceE---Eeee------CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEE
Q 004816 216 ------------ALNSTTEIVAIALNGQNIQ---VLVS------GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWV 274 (729)
Q Consensus 216 ------------~~~~~~~l~~~dl~~g~~~---~lt~------~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~ 274 (729)
.......|+++|+++++.. ++.. .......++|||||+ ++|...++.. ...+|++
T Consensus 207 ~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~---~~~~l~~ 282 (719)
T 1z68_A 207 PRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQ---NVSVLSI 282 (719)
T ss_dssp CEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESST---TEEEEEE
T ss_pred ccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEecccc---CeEEEEE
Confidence 0112358999999988652 4432 334567899999975 6666434332 3467999
Q ss_pred EE----ecCCCCeeeeEEe----cCCCCCcccccc-----CceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEEeecc
Q 004816 275 GY----ISENGDVYKRVCV----AGFDPTIVESPT-----EPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSL 340 (729)
Q Consensus 275 ~d----~~~~g~~~~~~~~----~~~~~~~~~~~~-----~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~ 340 (729)
+| ++ +|+... ++ .+.+ ..+. .+.|||||+ +++......+..+|+++|+++++.+.|+..
T Consensus 283 ~d~~~~~~-~g~~~~--~~~~~~~~~~----~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~ 355 (719)
T 1z68_A 283 CDFREDWQ-TWDCPK--TQEHIEESRT----GWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSG 355 (719)
T ss_dssp EEECSSSS-SEECCG--GGEEEEECSS----SCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCS
T ss_pred EcccCCCC-CCceEE--EEecccccCC----ceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccC
Confidence 99 76 555422 22 2332 2333 789999999 777554437888999999999888877754
Q ss_pred CccccCCcccccCcceeeeeecCCCCEEEEEEEE----CCeEEEEEEECCCC--ceEeeccC----CcceEEe--eeeCC
Q 004816 341 DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ----NGRSYLGILDDFGH--SLSLLDIP----FTDIDNI--TLGND 408 (729)
Q Consensus 341 ~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~----~g~~~ly~~d~~~g--~~~~lt~~----~~~v~~~--~~~~~ 408 (729)
..++.... +. +++.|++++.. .+..+||.++++++ +.+.|+.. ...+..+ +++++
T Consensus 356 ~~~v~~~~---------~~----d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~ 422 (719)
T 1z68_A 356 KWEAINIF---------RV----TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAK 422 (719)
T ss_dssp SSCEEEEE---------EE----CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGS
T ss_pred ceEEEEEE---------EE----eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCC
Confidence 33322222 22 56788888876 67889999999766 45777642 2233333 56677
Q ss_pred EEEEEEeCCCCCceEEEEEcCCCcceeeeeeEEecCCCC--CccCCCCCCCcEEEEeeccCCCeEEEEEEEcCCCCCCCC
Q 004816 409 CLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPD--TLKYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQA 486 (729)
Q Consensus 409 ~~~~~~~~~~~~~~ly~~d~~~~~~~~lt~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~ 486 (729)
.+++..++++.| .++++++++++..++. ..+.. ..+....+..++.++++.. + ..++++++.|++..
T Consensus 423 ~l~~~~s~~~~p-~~~l~d~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~l~~~~~~P~~~~--- 491 (719)
T 1z68_A 423 YYALVCYGPGIP-ISTLHDGRTDQEIKIL-----EENKELENALKNIQLPKEEIKKLEVD-E-ITLWYKMILPPQFD--- 491 (719)
T ss_dssp SEEEEECCBSSC-EEEEECSSSCCEEEEE-----ECCHHHHHHTTSBCCCEEEEEEEEET-T-EEEEEEEEECTTCC---
T ss_pred EEEEEcCCCCCC-eEEEEECCCCCEEEEe-----ecchhhhhhhccccCCceEEEEEecC-C-eEEEEEEEeCCCCC---
Confidence 777777777766 6888898887743332 22111 1244455667889999986 6 99999999998732
Q ss_pred CCCCCCCEEEEEcCCCCCCc-cccch-hhhHHH-hhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHH
Q 004816 487 SPEEKPPLLVKSHGGPTSEA-RGILN-LSIQYW-TSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLV 563 (729)
Q Consensus 487 ~~~~~~P~vv~~hGg~~~~~-~~~~~-~~~~~l-a~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~ 563 (729)
+.++.|+||++||+++... ...|. .....+ +++||.|+++|+||+++++..+.......++...++|+.+++++|.
T Consensus 492 -~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 570 (719)
T 1z68_A 492 -RSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFI 570 (719)
T ss_dssp -SSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHH
T ss_pred -CCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHH
Confidence 2567899999999976643 22332 234444 4789999999999999999998888888888788999999999999
Q ss_pred hCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhh--cCChhhhhhcCcccc
Q 004816 564 GSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNL--VGSEKDYYEKSPINF 640 (729)
Q Consensus 564 ~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~sp~~~ 640 (729)
+++.+|.+|++|+|||+||++++.++. +|++|+++|+.+|+.++..+.. .+...++... ....+.|...+|+.+
T Consensus 571 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~ 647 (719)
T 1z68_A 571 EMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYAS---VYTERFMGLPTKDDNLEHYKNSTVMAR 647 (719)
T ss_dssp TTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBH---HHHHHHHCCSSTTTTHHHHHHTCSGGG
T ss_pred hcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhcc---ccchhhcCCcccccchhhhhhCCHhHH
Confidence 988889999999999999999999998 8999999999999988754311 1112222211 123456788889899
Q ss_pred cCCCCC-CEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 641 VDKFSC-PIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 641 ~~~i~~-PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
+.++++ |+|++||++|.+||++++.+++++|+.++++++++++|+++|.+ ..+...+.++.+.+||+++|+
T Consensus 648 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 648 AEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGL-SGLSTNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp GGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTC-CTHHHHHHHHHHHHHHHHHHC
T ss_pred HhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCC-CcccHHHHHHHHHHHHHHhhC
Confidence 999998 89999999999999999999999999999999999999999998 556678899999999999874
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=1.2e-41 Score=386.87 Aligned_cols=583 Identities=12% Similarity=0.062 Sum_probs=398.4
Q ss_pred HHHhccCCccCceEEcCCCcEEEEeecCCCCCceEEEEcC-C----CCCCCCcccCCCC-Cccc-ccccccCCce-EEEE
Q 004816 82 DVVSGASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEP-A----KAGDEPSDITPKE-YAVR-TTAQEYGGGA-FRIF 153 (729)
Q Consensus 82 e~i~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~-~----~~~g~~~~l~~~~-~~~~-~~~~~~~~~~-~~~~ 153 (729)
..++....++..|..- |+++|+..... ...+ .|||.. . .+..+...|++.. ++.. ..-+...+.. ++++
T Consensus 64 ~~~~~~~~ri~~p~~~-g~~~y~f~~d~-~~~~-gl~rrt~~~~~~~~~p~wevllD~d~l~~~~g~~~~~~g~~~~~~~ 140 (711)
T 4hvt_A 64 ETIFYDQRKTPYGVIR-KGYVYNFWMDD-KNPQ-GLWRRTLVDNYSKDKPNWEVLIDFDKLSKKIGKKVAYRGVSNCFQN 140 (711)
T ss_dssp HHHHTCTTSCCCCEEE-TTEEEEEECCS-SCSS-CEEEEEEHHHHTSSSCCCEEEEEHHHHHHHHTSCEEEEEEEECSSS
T ss_pred HHHhccccccCCcEEE-CCEEEEEEecC-CCCc-EEEEEccchhcccCCCCcEEEeccccccccCCCcEEEeceeecCCC
Confidence 3455554467777666 99999987654 3444 788751 1 0012344444311 1111 1112223332 5566
Q ss_pred CCEEEEEECCCC----cEEEEeCCCCCCCCeecCCCCC--CCc-----eeeecceecCCCCEEEEEEeccC--CCCCCcc
Q 004816 154 GDTVIFSNYKDQ----RLYKHSIDSKDSSPLPITPDYG--EPL-----VSYADGIFDPRFNRYVTVREDRR--QDALNST 220 (729)
Q Consensus 154 ~~~i~~~~~~~~----~l~~~d~~~~~~~~~~lt~~~~--~~~-----~~~~~~~~SPdG~~l~~~~~~~~--~~~~~~~ 220 (729)
++++++.-...| .+..+|+.+ ++ .+..+-. .+. .++..++|- |++.++|.+...+ ....+..
T Consensus 141 ~~~~~~~ls~~G~d~~~~~~~d~~t--~~--~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 141 PNRYLISMSFGGKDEMFFREWDLEK--KD--FVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp TTEEEEEEEETTCSEEEEEEEETTT--TE--ECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCBCTTSSB
T ss_pred CCEEEEEeCCCCCceeEEEEEECCc--CC--cCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCcCcCCCC
Confidence 777777655444 788999987 42 3332211 000 133445887 6666666543222 1222345
Q ss_pred eEEEEEEcCCC--ceEEeeeCC--CeeeeeeeCCCCCe---EEEEEecCCCCCCCCcEEEEEEecCC--CCeeeeEEecC
Q 004816 221 TEIVAIALNGQ--NIQVLVSGS--DFYAFPRMDPRGER---MAWIEWHHPNMPWDKAELWVGYISEN--GDVYKRVCVAG 291 (729)
Q Consensus 221 ~~l~~~dl~~g--~~~~lt~~~--~~~~~~~~SPDG~~---la~~~~~~~~~~~~~~~l~~~d~~~~--g~~~~~~~~~~ 291 (729)
..+|+..+.+. +-+.+..+. +...++..++|+++ ..+++.... +..+++|+.+++ + +++ ..+...
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~-~~~~~~--~~l~~~ 289 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKD---FYNYDNYILDTK-YKNLKL--QKINMP 289 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESS---SSCEEEEEEECS-SSSCEE--EECCSC
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecc---cCceeEEEEcCC-CCCCcc--eEeecC
Confidence 78999998774 344555432 34556777889885 234442221 245789999876 3 332 333222
Q ss_pred CCCCccccccCceeCCCCcEEEEEecC--C-----CceEEEEEEcCCC--------eEEEeeccCccccCCcccccCcce
Q 004816 292 FDPTIVESPTEPKWSSKGELFFVTDRK--N-----GFWNLHKWIESNN--------EVLAIYSLDAEFSRPLWVFGINSY 356 (729)
Q Consensus 292 ~~~~~~~~~~~~~wspDG~l~~~~~~~--~-----g~~~l~~~d~~~g--------~~~~l~~~~~~~~~~~w~~~~~~~ 356 (729)
.+ ..+.++.+|++++..... . ....|+.++++++ +.+.+.... +.....++
T Consensus 290 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~ 355 (711)
T 4hvt_A 290 SD-------ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT-------ANEVFNFI 355 (711)
T ss_dssp TT-------CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC-------TTEEEEEE
T ss_pred Cc-------ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC-------CCCeEEEE
Confidence 22 234567788766644220 1 2346888887653 344433211 11111233
Q ss_pred eeeeecCCCCEEEEEEEECCeEEEEEEECCCCc--eEe-eccCC-cceEEe--eeeCCEEEEEEeCCCCCceEEEEEcCC
Q 004816 357 EIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS--LSL-LDIPF-TDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDD 430 (729)
Q Consensus 357 ~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~--~~~-lt~~~-~~v~~~--~~~~~~~~~~~~~~~~~~~ly~~d~~~ 430 (729)
.+ .++.+++...+++..+|+++++++|+ .+. +..+. ..+... ..+++.+++..++...|.++|++++.
T Consensus 356 ~~-----~~~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~- 429 (711)
T 4hvt_A 356 ST-----TKDRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT- 429 (711)
T ss_dssp EE-----CSSCEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-
T ss_pred EE-----ECCEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-
Confidence 44 33468889999999999999987774 445 55442 334333 45667899999999999999999988
Q ss_pred CcceeeeeeEEecCCCCCccCCCCCCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccc
Q 004816 431 HKLKAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL 510 (729)
Q Consensus 431 ~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~ 510 (729)
++.+.|+ .. ...+++..+ .++++.+++. ||.+++++++.|++.. +.++.|+||++|||++......|
T Consensus 430 ~~~~~l~------~~-~~~~~~~~~-~~e~v~~~s~-DG~~i~~~l~~P~~~~----~~~~~P~vl~~HGG~~~~~~~~~ 496 (711)
T 4hvt_A 430 HELKIIR------KA-LYSFDSENY-VLEQKEATSF-DGVKIPYFLVYKKGIK----FDGKNPTLLEAYGGFQVINAPYF 496 (711)
T ss_dssp SCEEEEE------CC-SSCCCGGGE-EEEEEEEECT-TSCEEEEEEEEETTCC----CSSCCCEEEECCCCTTCCCCCCC
T ss_pred CcEEEEe------cC-CcccCcccC-eeEEEEEECC-CCeEEEEEEEecCCCC----CCCCccEEEEECCCCCCCCCCcc
Confidence 6654443 22 233454445 6889999998 9999999999998732 35678999999999988877777
Q ss_pred hhhh-HHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHH
Q 004816 511 NLSI-QYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL 589 (729)
Q Consensus 511 ~~~~-~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~ 589 (729)
.... +.|+++||+|+.+|+||++++|..|.......++...++|+.++++||++++.+|++||+|+|+|+||++++.++
T Consensus 497 ~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a 576 (711)
T 4hvt_A 497 SRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAM 576 (711)
T ss_dssp CHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHH
T ss_pred cHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHH
Confidence 7655 589999999999999999999999999988888888999999999999999999999999999999999999999
Q ss_pred h-CCCcceEEEEeccccChhHHhhhcch--hhhhhhhhhcC--ChhhhhhcCcccccCCCCC--CEEEEEeCCCCCCChH
Q 004816 590 A-FRDTFKAGASLYGVADLSMLRAETHK--FESRYIDNLVG--SEKDYYEKSPINFVDKFSC--PIILFQGLEDKVVPPD 662 (729)
Q Consensus 590 ~-~~~~~~a~v~~~~~~d~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~sp~~~~~~i~~--PvL~i~G~~D~~vp~~ 662 (729)
. +|++|+++|+.+|+.|+..+...... +...|. .... ..+.+...||+.+++++++ |+|++||++|.+||+.
T Consensus 577 ~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~~~~~G-~p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~ 655 (711)
T 4hvt_A 577 TQRPELFGAVACEVPILDMIRYKEFGAGHSWVTEYG-DPEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVHPW 655 (711)
T ss_dssp HHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHC-CTTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSCTH
T ss_pred HhCcCceEEEEEeCCccchhhhhccccchHHHHHhC-CCcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCChH
Confidence 8 89999999999999998765432111 111111 0100 1245678899999999987 9999999999999999
Q ss_pred HHHHHHHHH-HhCCCCEEEEEECCCCcccCCc-ccHHHHHHHHHHHHHHHhC
Q 004816 663 QARKIYKAL-KENGLPVALVEYEGEQHGFRKA-ENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 663 ~~~~~~~~l-~~~g~~~~~~~~~~~gH~~~~~-~~~~~~~~~~~~fl~~~l~ 712 (729)
++.+++++| +++|++++++++|++||++... .......+.+++||.++|+
T Consensus 656 ~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg 707 (711)
T 4hvt_A 656 HGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANALK 707 (711)
T ss_dssp HHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHhC
Confidence 999999999 9999999999999999998653 4456777889999999997
No 14
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.93 E-value=8.2e-25 Score=221.04 Aligned_cols=213 Identities=13% Similarity=0.153 Sum_probs=148.3
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchh
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE 538 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~ 538 (729)
+.+++.. ||.+|++++|.|.+ .++.|+||++||+++......+...++.|+++||+|+++|+||++.++..
T Consensus 32 ~~~~~~~--dG~~i~g~l~~P~~-------~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~ 102 (259)
T 4ao6_A 32 RGFSLEV--DGRTVPGVYWSPAE-------GSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASV 102 (259)
T ss_dssp EEEEEEE--TTEEEEEEEEEESS-------SCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------
T ss_pred EEEEEee--CCeEEEEEEEeCCC-------CCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCc
Confidence 3444443 89999999999976 45679999999997766666777889999999999999999998765443
Q ss_pred HHHhhccCCC---------------cccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHhCCCcceEEEEecc
Q 004816 539 FRERLLGRWG---------------IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYG 603 (729)
Q Consensus 539 ~~~~~~~~~~---------------~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~~~~~a~v~~~~ 603 (729)
.......... ...+.|..++++++... +|+++|+++|+|+||++++.++...++++++|+..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~pri~Aav~~~~ 180 (259)
T 4ao6_A 103 QAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKRIKVALLGLM 180 (259)
T ss_dssp ------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCTTEEEEEEESC
T ss_pred ccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCCceEEEEEecc
Confidence 2221111110 01245777888888665 678999999999999999999984457888887665
Q ss_pred ccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEE
Q 004816 604 VADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEY 683 (729)
Q Consensus 604 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 683 (729)
...... ..++...+.+|++|+|++||++|.+||++++.+++++|.. .+.+++++
T Consensus 181 ~~~~~~------------------------~~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~--~~k~l~~~ 234 (259)
T 4ao6_A 181 GVEGVN------------------------GEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGT--KQKTLHVN 234 (259)
T ss_dssp CTTSTT------------------------HHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCC--SSEEEEEE
T ss_pred cccccc------------------------ccchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCC--CCeEEEEe
Confidence 432111 1223455778999999999999999999999999999854 35689999
Q ss_pred CCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 684 EGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 684 ~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
|+..|.+ ...+..+.+++||+++|+
T Consensus 235 ~G~H~~~----p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 235 PGKHSAV----PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp SSCTTCC----CHHHHTHHHHHHHHHHCC
T ss_pred CCCCCCc----CHHHHHHHHHHHHHHhcC
Confidence 9854433 234677889999999986
No 15
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.92 E-value=2.8e-24 Score=214.31 Aligned_cols=222 Identities=20% Similarity=0.278 Sum_probs=172.1
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCc
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 536 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g 536 (729)
..+.+++.. +|..+.++++.|.+ ..++.|+||++||..+. ...+...++.|+++||.|+++|++|.++..
T Consensus 5 ~~~~~~~~~--~~~~~~~~~~~p~~------~~~~~p~vv~~HG~~g~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 74 (241)
T 3f67_A 5 IAGETSIPS--QGENMPAYHARPKN------ADGPLPIVIVVQEIFGV--HEHIRDLCRRLAQEGYLAIAPELYFRQGDP 74 (241)
T ss_dssp EEEEEEEEE--TTEEEEEEEEEETT------CCSCEEEEEEECCTTCS--CHHHHHHHHHHHHTTCEEEEECTTTTTCCG
T ss_pred eeeeEEEec--CCcceEEEEecCCC------CCCCCCEEEEEcCcCcc--CHHHHHHHHHHHHCCcEEEEecccccCCCC
Confidence 346677777 79999999999976 23567999999996433 345677888999999999999999876654
Q ss_pred hhHHHh------hcc-CCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChh
Q 004816 537 REFRER------LLG-RWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLS 608 (729)
Q Consensus 537 ~~~~~~------~~~-~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~ 608 (729)
..+... ... .......+|+.++++++.+++ +|.++|+++|||+||.+++.++. +|+ ++++++.++....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~- 151 (241)
T 3f67_A 75 NEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVG- 151 (241)
T ss_dssp GGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSC-
T ss_pred CchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccC-
Confidence 432211 000 111234789999999999887 78899999999999999999998 665 8888887765321
Q ss_pred HHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCc
Q 004816 609 MLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQH 688 (729)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH 688 (729)
....+...+|...+.++++|+|+++|++|..+|++++.++++.+++++.+++++++++++|
T Consensus 152 -------------------~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 212 (241)
T 3f67_A 152 -------------------EKSLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADH 212 (241)
T ss_dssp -------------------CCCSSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCT
T ss_pred -------------------CCccCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCc
Confidence 1122334566677788899999999999999999999999999999999999999999999
Q ss_pred ccCC-------cccHHHHHHHHHHHHHHH
Q 004816 689 GFRK-------AENIKFTLEQQMVFFARV 710 (729)
Q Consensus 689 ~~~~-------~~~~~~~~~~~~~fl~~~ 710 (729)
++.. .+...+.++.+++||+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 213 AFNADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp TTTCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred ceecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 9853 344567888899998753
No 16
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.92 E-value=6.5e-24 Score=216.64 Aligned_cols=231 Identities=13% Similarity=0.107 Sum_probs=174.8
Q ss_pred EEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCC-CccccchhhhHHHhhCCcEEEEecCCCCCCCch--
Q 004816 461 IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSRGWAFVDVNYGGSTGYGR-- 537 (729)
Q Consensus 461 ~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~-- 537 (729)
.++... +|..+.+++..|.... +.++.|+||++||+++. .....+...+..|+++||.|+++|+||.+....
T Consensus 17 ~~~~~~-~g~~l~~~~~~~~~~~----~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~ 91 (276)
T 3hxk_A 17 STFSLN-DTAWVDFYQLQNPRQN----ENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNYN 91 (276)
T ss_dssp EECCCB-TTBEEEEECCCC----------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCSC
T ss_pred ccccCC-CCeEEEEEEeCCcccc----cCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCCC
Confidence 445565 8888988776654311 13667999999997643 334456678889999999999999998754221
Q ss_pred hHHHhhccCCCcccHHHHHHHHHHHHhCC---CCCCCcEEEEEcChHHHHHHHHHhC--CCcceEEEEeccccChhHHhh
Q 004816 538 EFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALAF--RDTFKAGASLYGVADLSMLRA 612 (729)
Q Consensus 538 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~--~~~~~a~v~~~~~~d~~~~~~ 612 (729)
.+. ...+|+.++++++.+.. .+|.++|+|+|||+||++++.++.. +++++++|+.+|+.++.....
T Consensus 92 ~~~---------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~ 162 (276)
T 3hxk_A 92 FLS---------QNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWP 162 (276)
T ss_dssp THH---------HHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCS
T ss_pred cCc---------hHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCC
Confidence 111 23688999999998863 3688999999999999999999975 889999999999887644322
Q ss_pred hcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCC
Q 004816 613 ETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRK 692 (729)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~ 692 (729)
....+ ..++ ..+. ...+|...+.++++|+|++||++|.++|++++.++++.|++.+.+++++++++++|++..
T Consensus 163 ~~~~~-~~~~-----~~~~-~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 235 (276)
T 3hxk_A 163 SDLSH-FNFE-----IENI-SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSL 235 (276)
T ss_dssp SSSSS-SCCC-----CSCC-GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTT
T ss_pred cchhh-hhcC-----chhh-hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccc
Confidence 11111 1111 1112 556777888889999999999999999999999999999999999999999999998754
Q ss_pred ------------cccHHHHHHHHHHHHHHHhC
Q 004816 693 ------------AENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 693 ------------~~~~~~~~~~~~~fl~~~l~ 712 (729)
.+...++++.+.+||+++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~ 267 (276)
T 3hxk_A 236 ANRTTAPSDAYCLPSVHRWVSWASDWLERQIK 267 (276)
T ss_dssp CSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHH
T ss_pred cCccccccccccCchHHHHHHHHHHHHHhCcc
Confidence 22457888999999999986
No 17
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.92 E-value=1.5e-23 Score=225.22 Aligned_cols=234 Identities=15% Similarity=0.092 Sum_probs=177.4
Q ss_pred CCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCC
Q 004816 456 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGY 535 (729)
Q Consensus 456 ~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~ 535 (729)
...+.++++. +|.+++++++.|++ .++.|+||++||+.... ..+....+.|+++||.|+++|+||.|.+
T Consensus 125 ~~~~~v~~~~--dg~~i~~~l~~p~~-------~~~~P~vl~~hG~~~~~--~~~~~~~~~l~~~G~~v~~~d~rG~G~s 193 (386)
T 2jbw_A 125 PPAERHELVV--DGIPMPVYVRIPEG-------PGPHPAVIMLGGLESTK--EESFQMENLVLDRGMATATFDGPGQGEM 193 (386)
T ss_dssp SCEEEEEEEE--TTEEEEEEEECCSS-------SCCEEEEEEECCSSCCT--TTTHHHHHHHHHTTCEEEEECCTTSGGG
T ss_pred CCeEEEEEEe--CCEEEEEEEEcCCC-------CCCCCEEEEeCCCCccH--HHHHHHHHHHHhCCCEEEEECCCCCCCC
Confidence 3568888887 79999999999976 35679999999875333 2223347889999999999999986543
Q ss_pred chhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHhCCCcceEEEEeccccChhHHhhhcc
Q 004816 536 GREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVADLSMLRAETH 615 (729)
Q Consensus 536 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~~~~~a~v~~~~~~d~~~~~~~~~ 615 (729)
. ..........+++.+++++|.+++.+|.++|+|+|+|+||++++.++.++++|+++|+. |+.++........
T Consensus 194 ---~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~a~v~~-~~~~~~~~~~~~~ 266 (386)
T 2jbw_A 194 ---F---EYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISW-GGFSDLDYWDLET 266 (386)
T ss_dssp ---T---TTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEE-SCCSCSTTGGGSC
T ss_pred ---C---CCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcCCcceeEEEEe-ccCChHHHHHhcc
Confidence 0 01111122245789999999998888899999999999999999999878899999999 9888754433211
Q ss_pred hhhhhhhhhhcCC------h-hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHH-HhCCCCEEEEEECCCC
Q 004816 616 KFESRYIDNLVGS------E-KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKAL-KENGLPVALVEYEGEQ 687 (729)
Q Consensus 616 ~~~~~~~~~~~~~------~-~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l-~~~g~~~~~~~~~~~g 687 (729)
...........+. . ..+...++...+.++++|+|+++|++|. +|++++.++++.| +. +++++++++++
T Consensus 267 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~---~~~~~~~~~~g 342 (386)
T 2jbw_A 267 PLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE---HLNLVVEKDGD 342 (386)
T ss_dssp HHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGG---GEEEEEETTCC
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCC---CcEEEEeCCCC
Confidence 1111111111221 1 3445678888889999999999999999 9999999999998 64 68999999999
Q ss_pred cccCCcccHHHHHHHHHHHHHHHhCC
Q 004816 688 HGFRKAENIKFTLEQQMVFFARVVGH 713 (729)
Q Consensus 688 H~~~~~~~~~~~~~~~~~fl~~~l~~ 713 (729)
|.+ .++..+..+.+.+||.++++.
T Consensus 343 H~~--~~~~~~~~~~i~~fl~~~l~~ 366 (386)
T 2jbw_A 343 HCC--HNLGIRPRLEMADWLYDVLVA 366 (386)
T ss_dssp GGG--GGGTTHHHHHHHHHHHHHHTS
T ss_pred cCC--ccchHHHHHHHHHHHHHhcCC
Confidence 976 345668899999999999973
No 18
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.90 E-value=4e-23 Score=233.92 Aligned_cols=259 Identities=16% Similarity=0.177 Sum_probs=186.7
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCC----cc-ccch-hhh---HHHhhCCcEEEEe
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE----AR-GILN-LSI---QYWTSRGWAFVDV 527 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~----~~-~~~~-~~~---~~la~~G~~v~~~ 527 (729)
..+.+.++.. ||.+|.++++.|.+ .++.|+||++||..... .. ..+. .+. ++|+++||+|+.+
T Consensus 24 ~~~~v~i~~~-DG~~L~~~~~~P~~-------~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~ 95 (615)
T 1mpx_A 24 IKREVMIPMR-DGVKLHTVIVLPKG-------AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQ 95 (615)
T ss_dssp EEEEEEEECT-TSCEEEEEEEEETT-------CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEE
T ss_pred EEEEEEEECC-CCCEEEEEEEeCCC-------CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEE
Confidence 3467888887 99999999999975 35679999999853321 11 1221 122 8899999999999
Q ss_pred cCCCCCCCchhHHHhh-----ccCCCcccHHHHHHHHHHHHhC-CCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEE
Q 004816 528 NYGGSTGYGREFRERL-----LGRWGIVDVNDCCSCATFLVGS-GKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGAS 600 (729)
Q Consensus 528 d~rGs~g~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~ 600 (729)
|+||+++++..+.... ...++..+.+|+.++++||.++ +..| .||+++|+||||++++.++. ++++|+++|+
T Consensus 96 D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~ 174 (615)
T 1mpx_A 96 DVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVP 174 (615)
T ss_dssp ECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEE
T ss_pred CCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEe
Confidence 9999988876654321 1233347899999999999998 6666 59999999999999999987 8999999999
Q ss_pred eccccCh-h-HHh-hh-c---------------------------chhhh-------------------hhhhhhc--C-
Q 004816 601 LYGVADL-S-MLR-AE-T---------------------------HKFES-------------------RYIDNLV--G- 627 (729)
Q Consensus 601 ~~~~~d~-~-~~~-~~-~---------------------------~~~~~-------------------~~~~~~~--~- 627 (729)
.+++.|+ . ... .. . ..+.. .+..... +
T Consensus 175 ~~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 254 (615)
T 1mpx_A 175 ESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAA 254 (615)
T ss_dssp ESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCS
T ss_pred cCCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCC
Confidence 9999884 3 110 00 0 00000 0000000 1
Q ss_pred ChhhhhhcCcccccCC--CCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCC---EEEEEECCCCcccCC----------
Q 004816 628 SEKDYYEKSPINFVDK--FSCPIILFQGLEDKVVPPDQARKIYKALKENGLP---VALVEYEGEQHGFRK---------- 692 (729)
Q Consensus 628 ~~~~~~~~sp~~~~~~--i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~---~~~~~~~~~gH~~~~---------- 692 (729)
..+.|...||+.++++ |++|+|++||.+|.. ++.++.+++++|+++|++ +++++.|+ +|++..
T Consensus 255 ~d~~w~~~Sp~~~~~~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~~~~~~~~ 332 (615)
T 1mpx_A 255 YDAFWQEQALDKVMARTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSALGALN 332 (615)
T ss_dssp SCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEETTEE
T ss_pred cChhhhhcChhhhhhccCCCCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccccccCccc
Confidence 1244567899999999 999999999999997 889999999999998753 89999998 687511
Q ss_pred --cc-cHHHHHHHHHHHHHHHhCCCCCCCCCCceecc
Q 004816 693 --AE-NIKFTLEQQMVFFARVVGHFDVADEIIPIKID 726 (729)
Q Consensus 693 --~~-~~~~~~~~~~~fl~~~l~~~~~~~~~~~~~~~ 726 (729)
.+ ......+.+++||++||++.+.....|++.+.
T Consensus 333 f~~~~~~~~~~~~~~~wfd~~Lkg~~g~~~~p~v~~~ 369 (615)
T 1mpx_A 333 FEGDTARQFRHDVLRPFFDQYLVDGAPKADTPPVFIY 369 (615)
T ss_dssp CSSCHHHHHHHHTHHHHHHHHHSTTCCCCCCCSEEEE
T ss_pred cCcccchhhhhhHHHHHHHHHhcCCCCCCCCCCEEEE
Confidence 11 12223678899999999976333556777653
No 19
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.90 E-value=3.5e-23 Score=211.37 Aligned_cols=233 Identities=17% Similarity=0.129 Sum_probs=167.4
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCC-CCCCCCCCCCCEEEEEcCCCCC-CccccchhhhHHHhhCCcEEEEecCCCCCCCc
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNP-IYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 536 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~-~~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g 536 (729)
+.+++.. +|..+.+.+|.|... .+. ..++.|+||++|||++. .....+...+..|+++||.|+++||||.+..+
T Consensus 5 ~~~~~~~--~~~~~~~~~~~p~~~~~~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 80 (277)
T 3bxp_A 5 EQRTLNT--AAHPFQITAYWLDQISDFE--TAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQ 80 (277)
T ss_dssp EEEEECS--TTCCEEEEEEEECCCCSSS--CCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTC
T ss_pred EEEEecc--CCCcceEEEEeCCcccccc--cCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCC
Confidence 4566644 688888888988631 001 24567999999997543 23345667788899999999999999855222
Q ss_pred hhHHHhhccCCCcccHHHHHHHHHHHHhCC---CCCCCcEEEEEcChHHHHHHHHHh-C--------------CCcceEE
Q 004816 537 REFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALA-F--------------RDTFKAG 598 (729)
Q Consensus 537 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~-~--------------~~~~~a~ 598 (729)
.. .....+|+.++++++.+.. .+|+++|+|+|||+||++|+.++. + +.+++++
T Consensus 81 ~~---------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 151 (277)
T 3bxp_A 81 SV---------YPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAI 151 (277)
T ss_dssp CC---------TTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEE
T ss_pred cc---------CchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEE
Confidence 21 1134788999999988752 357789999999999999999987 3 7889999
Q ss_pred EEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCE
Q 004816 599 ASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPV 678 (729)
Q Consensus 599 v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~ 678 (729)
|+.+|..++........ .+....++ .+...+|...+.++.+|+|++||++|.++|++++.++++.|++.+.++
T Consensus 152 v~~~p~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~ 224 (277)
T 3bxp_A 152 ILGYPVIDLTAGFPTTS----AARNQITT---DARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVAT 224 (277)
T ss_dssp EEESCCCBTTSSSSSSH----HHHHHHCS---CGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCE
T ss_pred EEeCCcccCCCCCCCcc----ccchhccc---hhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeE
Confidence 99999887542211000 00001111 234466777788888999999999999999999999999999999999
Q ss_pred EEEEECCCCcccCCc--------------ccHHHHHHHHHHHHHHHh
Q 004816 679 ALVEYEGEQHGFRKA--------------ENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 679 ~~~~~~~~gH~~~~~--------------~~~~~~~~~~~~fl~~~l 711 (729)
+++++++++|.+... +...++++.+.+||+++.
T Consensus 225 ~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 225 AYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp EEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 999999999976433 225678899999998864
No 20
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.90 E-value=6.5e-23 Score=232.85 Aligned_cols=258 Identities=17% Similarity=0.174 Sum_probs=187.4
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCC-----Ccc-ccch---hhh-HHHhhCCcEEEEe
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-----EAR-GILN---LSI-QYWTSRGWAFVDV 527 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~-----~~~-~~~~---~~~-~~la~~G~~v~~~ 527 (729)
.+.+.++.. ||.+|.++++.|.+ .++.|+||++||.... ... ..|. ... ++|+++||+|+.+
T Consensus 37 ~~~v~i~~~-DG~~L~~~l~~P~~-------~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~ 108 (652)
T 2b9v_A 37 KREVMVPMR-DGVKLYTVIVIPKN-------ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQ 108 (652)
T ss_dssp EEEEEEECT-TSCEEEEEEEEETT-------CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEE
T ss_pred EEEEEEECC-CCcEEEEEEEecCC-------CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEE
Confidence 467888888 99999999999976 3567999999975322 010 0111 123 8899999999999
Q ss_pred cCCCCCCCchhHHHhh--c---cCCCcccHHHHHHHHHHHHhC-CCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEE
Q 004816 528 NYGGSTGYGREFRERL--L---GRWGIVDVNDCCSCATFLVGS-GKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGAS 600 (729)
Q Consensus 528 d~rGs~g~g~~~~~~~--~---~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~ 600 (729)
|+||+++++..+.... . ..++..+.+|+.++++||.++ +..| .||+++|+||||++++.++. ++++|+++|+
T Consensus 109 D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~ 187 (652)
T 2b9v_A 109 DIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAP 187 (652)
T ss_dssp ECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEE
T ss_pred ecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEe
Confidence 9999999887654331 1 222347899999999999998 7777 59999999999999999987 8899999999
Q ss_pred eccccChhH--Hh-hh-c-c----hh------------------hhhh---h--------------------hhhcC---
Q 004816 601 LYGVADLSM--LR-AE-T-H----KF------------------ESRY---I--------------------DNLVG--- 627 (729)
Q Consensus 601 ~~~~~d~~~--~~-~~-~-~----~~------------------~~~~---~--------------------~~~~~--- 627 (729)
.+++.|+.. .. .. . . .+ ...| + ...+.
T Consensus 188 ~~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 267 (652)
T 2b9v_A 188 ESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPA 267 (652)
T ss_dssp EEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCS
T ss_pred cccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCC
Confidence 999888532 00 00 0 0 00 0000 0 00000
Q ss_pred ChhhhhhcCcccccCC--CCCCEEEEEeCCCCCCChHHHHHHHHHHHhCC--CCEEEEEECCCCcccCC-----------
Q 004816 628 SEKDYYEKSPINFVDK--FSCPIILFQGLEDKVVPPDQARKIYKALKENG--LPVALVEYEGEQHGFRK----------- 692 (729)
Q Consensus 628 ~~~~~~~~sp~~~~~~--i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g--~~~~~~~~~~~gH~~~~----------- 692 (729)
..+.|...||+.++++ |++|+|++||.+|.+ ++.++.+++++|+.+| +++++++.|+ +|+...
T Consensus 268 ~d~yw~~~Sp~~~~~~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~~~~~f 345 (652)
T 2b9v_A 268 YDAFWQGQALDKILAQRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTLGPLEF 345 (652)
T ss_dssp SSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEETTEEC
T ss_pred CChHHhcCChhhhhhcCCCCCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccCCcccc
Confidence 1234566799999999 999999999999997 7789999999999998 8899999887 697521
Q ss_pred --cccHHHHHHHHHHHHHHHhCCCCCCCCCCceecc
Q 004816 693 --AENIKFTLEQQMVFFARVVGHFDVADEIIPIKID 726 (729)
Q Consensus 693 --~~~~~~~~~~~~~fl~~~l~~~~~~~~~~~~~~~ 726 (729)
........+.+++||+++|++.+.....|++.+.
T Consensus 346 ~~~~~~~~~~~~~~~wfd~~Lkg~~g~~~~p~v~~~ 381 (652)
T 2b9v_A 346 EGDTAHQYRRDVFRPFFDEYLKPGSASVHLPDAIIY 381 (652)
T ss_dssp SSCHHHHHHHHTHHHHHHHHHSTTCCCCCCCSEEEE
T ss_pred ccccchhhhhhHHHHHHHHHhCCCCCCCCCCCeEEE
Confidence 1112334678899999999976333557777664
No 21
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.90 E-value=8.2e-23 Score=205.41 Aligned_cols=231 Identities=21% Similarity=0.258 Sum_probs=164.7
Q ss_pred EEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHH
Q 004816 461 IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFR 540 (729)
Q Consensus 461 ~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~ 540 (729)
+++.. +|.+++++++.|.+ ..++.|+||++||.+.......|...++.|+++||.|+++|+||.|.+.....
T Consensus 4 ~~~~~--~g~~l~~~~~~p~~------~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~ 75 (251)
T 2wtm_A 4 MYIDC--DGIKLNAYLDMPKN------NPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFE 75 (251)
T ss_dssp EEEEE--TTEEEEEEEECCTT------CCSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG
T ss_pred eEEec--CCcEEEEEEEccCC------CCCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccc
Confidence 45554 79999999998864 12456899999998655334566778889999999999999998775443211
Q ss_pred HhhccCCC-cccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcch--
Q 004816 541 ERLLGRWG-IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHK-- 616 (729)
Q Consensus 541 ~~~~~~~~-~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~-- 616 (729)
.+. ....+|+.++++++.+...+ ++++++||||||.+++.++. +|++++++|+.+|.............
T Consensus 76 -----~~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 148 (251)
T 2wtm_A 76 -----DHTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLG 148 (251)
T ss_dssp -----GCCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETT
T ss_pred -----cCCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhcc
Confidence 111 12368888999999765433 48999999999999999998 99999999999987654332111000
Q ss_pred --h----hhhhhhhhcC---Ch---hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEEC
Q 004816 617 --F----ESRYIDNLVG---SE---KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYE 684 (729)
Q Consensus 617 --~----~~~~~~~~~~---~~---~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ 684 (729)
+ ...+.....+ .. ......++...+.++++|+|++||++|.++|++.++++++.+. ++++++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~ 224 (251)
T 2wtm_A 149 LKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYK----NCKLVTIP 224 (251)
T ss_dssp EECBTTBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSS----SEEEEEET
T ss_pred ccCCchhcchHHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCC----CcEEEEEC
Confidence 0 0000000000 00 0111223344566789999999999999999999998887763 67999999
Q ss_pred CCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 685 GEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 685 ~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
++||.+ .+...++.+.+.+|+.+++.
T Consensus 225 ~~gH~~--~~~~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 225 GDTHCY--DHHLELVTEAVKEFMLEQIA 250 (251)
T ss_dssp TCCTTC--TTTHHHHHHHHHHHHHHHHC
T ss_pred CCCccc--chhHHHHHHHHHHHHHHhcc
Confidence 999987 67788899999999998875
No 22
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.90 E-value=7.7e-23 Score=215.30 Aligned_cols=239 Identities=18% Similarity=0.215 Sum_probs=173.9
Q ss_pred CCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCC
Q 004816 456 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGY 535 (729)
Q Consensus 456 ~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~ 535 (729)
...+.+++.+. +|.++.++++.|.+ ..++.|+||++||+++.. .+......++++||.|+++|+||.+++
T Consensus 66 ~~~~~~~~~~~-dg~~i~~~~~~P~~------~~~~~p~vv~~HG~g~~~---~~~~~~~~l~~~G~~v~~~d~rG~g~s 135 (337)
T 1vlq_A 66 VEAYDVTFSGY-RGQRIKGWLLVPKL------EEEKLPCVVQYIGYNGGR---GFPHDWLFWPSMGYICFVMDTRGQGSG 135 (337)
T ss_dssp EEEEEEEEECG-GGCEEEEEEEEECC------SCSSEEEEEECCCTTCCC---CCGGGGCHHHHTTCEEEEECCTTCCCS
T ss_pred eEEEEEEEEcC-CCCEEEEEEEecCC------CCCCccEEEEEcCCCCCC---CCchhhcchhhCCCEEEEecCCCCCCc
Confidence 35688889887 89999999999975 135679999999986543 233455678899999999999998855
Q ss_pred chhHHHhh------ccCCC---------------cccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCC
Q 004816 536 GREFRERL------LGRWG---------------IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRD 593 (729)
Q Consensus 536 g~~~~~~~------~~~~~---------------~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~ 593 (729)
+....... ...++ ...++|+.++++++.++..+|.++|+++|+|+||++++.++. +|
T Consensus 136 ~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p- 214 (337)
T 1vlq_A 136 WLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK- 214 (337)
T ss_dssp SSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-
T ss_pred ccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-
Confidence 43100000 00000 034789999999999998888899999999999999999998 66
Q ss_pred cceEEEEecccc-ChhHHhhhcc--hhh--hhhhhhhcCCh----hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHH
Q 004816 594 TFKAGASLYGVA-DLSMLRAETH--KFE--SRYIDNLVGSE----KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQA 664 (729)
Q Consensus 594 ~~~a~v~~~~~~-d~~~~~~~~~--~~~--~~~~~~~~~~~----~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~ 664 (729)
+++++|+.+|.. ++........ .+. ..++....... ..+...+|...+.++++|+|+++|++|.++|++++
T Consensus 215 ~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~ 294 (337)
T 1vlq_A 215 KAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTV 294 (337)
T ss_dssp SCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHH
T ss_pred CccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCchhH
Confidence 699999999854 4333221110 000 11111111111 12344577788899999999999999999999999
Q ss_pred HHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 665 RKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 665 ~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
.+++++++. +++++++++++|.+.. .+..+.+++||.++|+
T Consensus 295 ~~~~~~l~~---~~~~~~~~~~gH~~~~----~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 295 FAAYNYYAG---PKEIRIYPYNNHEGGG----SFQAVEQVKFLKKLFE 335 (337)
T ss_dssp HHHHHHCCS---SEEEEEETTCCTTTTH----HHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCC---CcEEEEcCCCCCCCcc----hhhHHHHHHHHHHHHh
Confidence 999988864 6899999999998632 3567889999999886
No 23
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.90 E-value=1.9e-22 Score=219.03 Aligned_cols=224 Identities=15% Similarity=0.221 Sum_probs=163.2
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcc
Q 004816 471 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIV 550 (729)
Q Consensus 471 ~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~ 550 (729)
.+.+.++.|++ .++.|+||++||+++. .+...++.|+++||.|+++|+||.++.... ....
T Consensus 144 ~l~~~l~~P~~-------~~~~P~Vv~~hG~~~~----~~~~~a~~La~~Gy~V~a~D~rG~g~~~~~--------~~~~ 204 (422)
T 3k2i_A 144 RVRATLFLPPG-------PGPFPGIIDIFGIGGG----LLEYRASLLAGHGFATLALAYYNFEDLPNN--------MDNI 204 (422)
T ss_dssp TEEEEEEECSS-------SCCBCEEEEECCTTCS----CCCHHHHHHHTTTCEEEEEECSSSTTSCSS--------CSCE
T ss_pred cEEEEEEcCCC-------CCCcCEEEEEcCCCcc----hhHHHHHHHHhCCCEEEEEccCCCCCCCCC--------cccC
Confidence 68889999976 3567999999998544 234468889999999999999987654332 2224
Q ss_pred cHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhc-----chh--hhh--
Q 004816 551 DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAET-----HKF--ESR-- 620 (729)
Q Consensus 551 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~-----~~~--~~~-- 620 (729)
..+|+.+++++|.++..+|.++|+|+|||+||++++.++. +|+ ++++|+++|........... ... ...
T Consensus 205 ~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (422)
T 3k2i_A 205 SLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRI 283 (422)
T ss_dssp ETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGC
T ss_pred CHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhc
Confidence 5899999999999998888899999999999999999998 776 99999998876321100000 000 000
Q ss_pred --------hhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHH-HHHHHHHHhCCCC-EEEEEECCCCccc
Q 004816 621 --------YIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQA-RKIYKALKENGLP-VALVEYEGEQHGF 690 (729)
Q Consensus 621 --------~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~-~~~~~~l~~~g~~-~~~~~~~~~gH~~ 690 (729)
.....+.+.......+....+.++++|+|++||++|.++|.++. +.+.+.|++.|++ +++++||++||.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~ 363 (422)
T 3k2i_A 284 KVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYI 363 (422)
T ss_dssp EECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCC
T ss_pred ccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEE
Confidence 00000011111122233445678899999999999999999866 6899999999988 9999999999997
Q ss_pred CC---------------------------cccHHHHHHHHHHHHHHHhCCC
Q 004816 691 RK---------------------------AENIKFTLEQQMVFFARVVGHF 714 (729)
Q Consensus 691 ~~---------------------------~~~~~~~~~~~~~fl~~~l~~~ 714 (729)
.. .+...+.++.+++||+++|+..
T Consensus 364 ~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 364 EPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp CSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 32 2456789999999999999843
No 24
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.90 E-value=1.7e-23 Score=215.04 Aligned_cols=236 Identities=13% Similarity=0.099 Sum_probs=173.7
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCch
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGR 537 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~ 537 (729)
.+.+.+.. +|..+.++++.|. +.|+||++||+++. ...|...+..|+++||.|+++|+||.+.+..
T Consensus 6 ~~~~~~~~--~g~~l~~~~~~p~----------~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~ 71 (290)
T 3ksr_A 6 LSSIEIPV--GQDELSGTLLTPT----------GMPGVLFVHGWGGS--QHHSLVRAREAVGLGCICMTFDLRGHEGYAS 71 (290)
T ss_dssp EEEEEEEE--TTEEEEEEEEEEE----------SEEEEEEECCTTCC--TTTTHHHHHHHHTTTCEEECCCCTTSGGGGG
T ss_pred eeeEEecC--CCeEEEEEEecCC----------CCcEEEEeCCCCCC--cCcHHHHHHHHHHCCCEEEEeecCCCCCCCC
Confidence 35667766 7899999999884 35899999998543 4466778889999999999999998665433
Q ss_pred hHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcch
Q 004816 538 EFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHK 616 (729)
Q Consensus 538 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~ 616 (729)
.... .. .....+|+.++++++.+++.+|.++|+|+|||+||++++.++. +| ++++++.+|.......+.....
T Consensus 72 ~~~~---~~-~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~ 145 (290)
T 3ksr_A 72 MRQS---VT-RAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKV 145 (290)
T ss_dssp GTTT---CB-HHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHH
T ss_pred Cccc---cc-HHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhcccc
Confidence 2111 00 1123789999999999988788889999999999999999998 66 7888888886643221110000
Q ss_pred -hh-hhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcc
Q 004816 617 -FE-SRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAE 694 (729)
Q Consensus 617 -~~-~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~ 694 (729)
.. .............+...++...+.++++|+|+++|++|.+++++++..+++.++..+ +++++++++++|.+...+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~ 224 (290)
T 3ksr_A 146 SLNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNAR-SLTSRVIAGADHALSVKE 224 (290)
T ss_dssp HHHHSTTHHHHTTSCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSS-EEEEEEETTCCTTCCSHH
T ss_pred cccCChhhhhhhhhhhhhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCC-CceEEEcCCCCCCCCcch
Confidence 00 000111111112222333445567788999999999999999999999999998766 789999999999987766
Q ss_pred cHHHHHHHHHHHHHHHhCCC
Q 004816 695 NIKFTLEQQMVFFARVVGHF 714 (729)
Q Consensus 695 ~~~~~~~~~~~fl~~~l~~~ 714 (729)
....+.+.+.+||.+++...
T Consensus 225 ~~~~~~~~i~~fl~~~~~~~ 244 (290)
T 3ksr_A 225 HQQEYTRALIDWLTEMVVGR 244 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcCC
Confidence 77889999999999998633
No 25
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.90 E-value=7.6e-22 Score=198.10 Aligned_cols=211 Identities=17% Similarity=0.252 Sum_probs=165.8
Q ss_pred CcE--EEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCC---CccccchhhhHHHhhCCcEEEEecCCC
Q 004816 457 LPE--LIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS---EARGILNLSIQYWTSRGWAFVDVNYGG 531 (729)
Q Consensus 457 ~~~--~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~---~~~~~~~~~~~~la~~G~~v~~~d~rG 531 (729)
..+ .+.+.+. +| .+.++++.|.+ ++.|+||++||.++. .....+...++.|+++||.|+++|+||
T Consensus 20 ~~e~~~~~~~~~-~g-~l~~~~~~p~~--------~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 89 (249)
T 2i3d_A 20 QGHMPEVIFNGP-AG-RLEGRYQPSKE--------KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRS 89 (249)
T ss_dssp ----CEEEEEET-TE-EEEEEEECCSS--------TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred cCceeEEEEECC-Cc-eEEEEEEcCCC--------CCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCC
Confidence 346 8889886 66 89999998743 456899999996422 222334667889999999999999998
Q ss_pred CCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHH
Q 004816 532 STGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSML 610 (729)
Q Consensus 532 s~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~ 610 (729)
.+.....+ .......+|+.++++++.++.. +.++++++|||+||++++.++. +|+ ++++|+.+|..+...
T Consensus 90 ~G~s~~~~------~~~~~~~~d~~~~i~~l~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~- 160 (249)
T 2i3d_A 90 IGRSQGEF------DHGAGELSDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD- 160 (249)
T ss_dssp STTCCSCC------CSSHHHHHHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC-
T ss_pred CCCCCCCC------CCccchHHHHHHHHHHHHHhCC-CCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh-
Confidence 76543221 1122346999999999988753 7779999999999999999998 887 999999999765311
Q ss_pred hhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHh-CCCCEEEEEECCCCcc
Q 004816 611 RAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKE-NGLPVALVEYEGEQHG 689 (729)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~-~g~~~~~~~~~~~gH~ 689 (729)
...+.++++|+|+++|++|.++|++++.++++.++. .+.+++++++++++|.
T Consensus 161 ---------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 213 (249)
T 2i3d_A 161 ---------------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHF 213 (249)
T ss_dssp ---------------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTT
T ss_pred ---------------------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcc
Confidence 123457789999999999999999999999999986 5668899999999998
Q ss_pred cCCcccHHHHHHHHHHHHHHHhCCCC
Q 004816 690 FRKAENIKFTLEQQMVFFARVVGHFD 715 (729)
Q Consensus 690 ~~~~~~~~~~~~~~~~fl~~~l~~~~ 715 (729)
+. +...+..+.+.+||.+++....
T Consensus 214 ~~--~~~~~~~~~i~~fl~~~l~~~~ 237 (249)
T 2i3d_A 214 FN--GKVDELMGECEDYLDRRLNGEL 237 (249)
T ss_dssp CT--TCHHHHHHHHHHHHHHHHTTCS
T ss_pred cc--cCHHHHHHHHHHHHHHhcCCCC
Confidence 76 4677899999999999997443
No 26
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.90 E-value=1.6e-22 Score=220.74 Aligned_cols=227 Identities=14% Similarity=0.191 Sum_probs=160.9
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcc
Q 004816 471 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIV 550 (729)
Q Consensus 471 ~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~ 550 (729)
.+.++++.|.+ .++.|+||++||+.+. .+...++.|+++||.|+++||||.++.+.. ....
T Consensus 160 ~l~~~l~~P~~-------~~~~P~Vv~lhG~~~~----~~~~~a~~La~~Gy~Vla~D~rG~~~~~~~--------~~~~ 220 (446)
T 3hlk_A 160 RVRGTLFLPPE-------PGPFPGIVDMFGTGGG----LLEYRASLLAGKGFAVMALAYYNYEDLPKT--------METL 220 (446)
T ss_dssp TEEEEEEECSS-------SCCBCEEEEECCSSCS----CCCHHHHHHHTTTCEEEEECCSSSTTSCSC--------CSEE
T ss_pred eEEEEEEeCCC-------CCCCCEEEEECCCCcc----hhhHHHHHHHhCCCEEEEeccCCCCCCCcc--------hhhC
Confidence 68889999965 3567999999998543 233458899999999999999987654432 2224
Q ss_pred cHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhh---hc--ch--hhh-h-
Q 004816 551 DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRA---ET--HK--FES-R- 620 (729)
Q Consensus 551 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~---~~--~~--~~~-~- 620 (729)
..+|+.+++++|.++..+|.++|+|+|||+||++++.++. +|+ ++++|+.+|......... .. .. +.. .
T Consensus 221 ~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (446)
T 3hlk_A 221 HLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRI 299 (446)
T ss_dssp EHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGC
T ss_pred CHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhcc
Confidence 5899999999999998888999999999999999999988 776 999999988653211000 00 00 000 0
Q ss_pred --------hhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHH-HHHHHHHHhCCCC-EEEEEECCCCccc
Q 004816 621 --------YIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQA-RKIYKALKENGLP-VALVEYEGEQHGF 690 (729)
Q Consensus 621 --------~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~-~~~~~~l~~~g~~-~~~~~~~~~gH~~ 690 (729)
.....+.+............+.++++|+|+++|++|.++|..+. ..+++.|+++|++ +++++||++||.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~ 379 (446)
T 3hlk_A 300 KVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYI 379 (446)
T ss_dssp EECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCC
T ss_pred ccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeE
Confidence 00000001111111122234677889999999999999999554 7999999999988 8999999999998
Q ss_pred C---------------------------CcccHHHHHHHHHHHHHHHhCCCCCC
Q 004816 691 R---------------------------KAENIKFTLEQQMVFFARVVGHFDVA 717 (729)
Q Consensus 691 ~---------------------------~~~~~~~~~~~~~~fl~~~l~~~~~~ 717 (729)
. ..+...+.++.+++||+++|+.....
T Consensus 380 ~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~~~~ 433 (446)
T 3hlk_A 380 EPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGT 433 (446)
T ss_dssp CSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCCCCC
Confidence 3 22336679999999999999854333
No 27
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.89 E-value=4.1e-22 Score=211.48 Aligned_cols=245 Identities=16% Similarity=0.151 Sum_probs=168.3
Q ss_pred CCCCcEEEEeeccCCCeEEEEEEEc-CCCCCC----------------CCCCCCCCCEEEEEcCCCCCCccc---cchhh
Q 004816 454 YFSLPELIEFPTEVPGQKAYAYYYP-PSNPIY----------------QASPEEKPPLLVKSHGGPTSEARG---ILNLS 513 (729)
Q Consensus 454 ~~~~~~~~~~~~~~dG~~l~~~l~~-P~~~~~----------------~~~~~~~~P~vv~~hGg~~~~~~~---~~~~~ 513 (729)
.....+.+.+... +| +.+.+|. |..... ..+..++.|+||++|||++..... .|...
T Consensus 60 ~~v~~~dv~~~~~-~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~ 136 (365)
T 3ebl_A 60 EGVSSFDHIIDQS-VG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSL 136 (365)
T ss_dssp TTEEEEEEEEETT-TT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHH
T ss_pred CCCceeeEEecCC-CC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHH
Confidence 3445677888876 77 6666676 764200 001245789999999987543322 25667
Q ss_pred hHHHhhC-CcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCC----CCCCC-cEEEEEcChHHHHHHH
Q 004816 514 IQYWTSR-GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG----KADEK-RLCITGGSAGGYTTLA 587 (729)
Q Consensus 514 ~~~la~~-G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-ri~i~G~S~GG~~a~~ 587 (729)
++.|+++ ||.|+.+|||+++++.. ...++|+.++++|+.++. .+|++ ||+|+|+|+||++|+.
T Consensus 137 ~~~la~~~g~~Vv~~dyR~~p~~~~-----------~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~ 205 (365)
T 3ebl_A 137 CRRFVKLSKGVVVSVNYRRAPEHRY-----------PCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHH 205 (365)
T ss_dssp HHHHHHHHTSEEEEECCCCTTTSCT-----------THHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHH
T ss_pred HHHHHHHCCCEEEEeeCCCCCCCCC-----------cHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHH
Confidence 7888886 99999999998765331 134799999999999764 58898 9999999999999998
Q ss_pred HHh-CCC---cceEEEEeccccChhHHhhhcchh----------hhhhhhhhcC--ChhhhhhcCccc-ccCCCC----C
Q 004816 588 ALA-FRD---TFKAGASLYGVADLSMLRAETHKF----------ESRYIDNLVG--SEKDYYEKSPIN-FVDKFS----C 646 (729)
Q Consensus 588 ~~~-~~~---~~~a~v~~~~~~d~~~~~~~~~~~----------~~~~~~~~~~--~~~~~~~~sp~~-~~~~i~----~ 646 (729)
++. .++ +++++|+.+|+.+........... ...+...... ........+|+. ....++ +
T Consensus 206 ~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~p 285 (365)
T 3ebl_A 206 VAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFA 285 (365)
T ss_dssp HHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCCTTSCCC
T ss_pred HHHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhccCCCC
Confidence 886 443 799999999998754221110000 0001111111 111112223432 233444 5
Q ss_pred CEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccC---CcccHHHHHHHHHHHHHHHhCCC
Q 004816 647 PIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFR---KAENIKFTLEQQMVFFARVVGHF 714 (729)
Q Consensus 647 PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~---~~~~~~~~~~~~~~fl~~~l~~~ 714 (729)
|+|++||++|.++ .++.+++++|+++|+++++++++|++|+|. ..+...++++.+.+||+++++..
T Consensus 286 P~Li~~G~~D~l~--~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 354 (365)
T 3ebl_A 286 KSLIIVSGLDLTC--DRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYG 354 (365)
T ss_dssp CEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC--
T ss_pred CEEEEEcCcccch--hHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhcc
Confidence 8999999999654 567899999999999999999999999975 34667789999999999999743
No 28
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.89 E-value=4.5e-23 Score=211.35 Aligned_cols=234 Identities=15% Similarity=0.127 Sum_probs=170.4
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCC-CCCCCCCCCCEEEEEcCCCCC-CccccchhhhHHHhhCCcEEEEecCCCCCC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPI-YQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSRGWAFVDVNYGGSTG 534 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~-~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~la~~G~~v~~~d~rGs~g 534 (729)
+.+.+.+... +|..+.+.+| |++.. +. ..++.|+||++||+++. .....+...+..|+++||.|+++|+||.+.
T Consensus 18 ~~~~v~~~~~-~g~~~~~~~y-p~~~~~~~--~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~ 93 (283)
T 3bjr_A 18 QGMQVIKQKL-TATCAQLTGY-LHQPDTNA--HQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTD 93 (283)
T ss_dssp CSSEEEEEEC-TTSSCEEEEE-EC----------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTT
T ss_pred CCcceEEeec-CCCceeEEEe-cCCccccc--cCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCc
Confidence 4567778776 7877777888 65410 00 13567999999997643 223446678889999999999999998765
Q ss_pred CchhHHHhhccCCCcccHHHHHHHHHHHHhCC---CCCCCcEEEEEcChHHHHHHHHHh-CCCc-------------ceE
Q 004816 535 YGREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALA-FRDT-------------FKA 597 (729)
Q Consensus 535 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~-~~~~-------------~~a 597 (729)
.+.. ......|+.++++++.+.. .+|.++++|+|||+||++++.++. +|++ +++
T Consensus 94 ~~~~---------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~ 164 (283)
T 3bjr_A 94 QQPL---------GLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNN 164 (283)
T ss_dssp CSSC---------BTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSS
T ss_pred cccC---------chhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccE
Confidence 4201 1123678999999998863 467789999999999999999988 8876 899
Q ss_pred EEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCC
Q 004816 598 GASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLP 677 (729)
Q Consensus 598 ~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~ 677 (729)
+++.+|..++........ ......+ ..+...++...+.++++|+|+++|++|.++|++++.++++.++..|.+
T Consensus 165 ~v~~~p~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~ 237 (283)
T 3bjr_A 165 VVLGYPVISPLLGFPKDD----ATLATWT---PTPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIP 237 (283)
T ss_dssp EEEESCCCCTTSBC------------CCC---CCGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCC
T ss_pred EEEcCCcccccccccccc----chHHHHH---HHhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCC
Confidence 999999887432111000 0011111 123455677778888999999999999999999999999999999999
Q ss_pred EEEEEECCCCcccCCcc------------cHHHHHHHHHHHHHHH
Q 004816 678 VALVEYEGEQHGFRKAE------------NIKFTLEQQMVFFARV 710 (729)
Q Consensus 678 ~~~~~~~~~gH~~~~~~------------~~~~~~~~~~~fl~~~ 710 (729)
++++++++++|.+.... ...++.+.+.+||+++
T Consensus 238 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 238 YELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp EEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred eEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 99999999999864322 1247788888998764
No 29
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.89 E-value=7.1e-22 Score=206.89 Aligned_cols=230 Identities=18% Similarity=0.248 Sum_probs=167.9
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCC-ccccchhhhHHHhh-CCcEEEEecCCCCCCC
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWTS-RGWAFVDVNYGGSTGY 535 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~la~-~G~~v~~~d~rGs~g~ 535 (729)
.+.+++++. +| .+.+++|.|.+ ...|+||++|||++.. ....+...+..|++ .||.|+.+|||+++++
T Consensus 63 ~~~~~~~~~-~g-~i~~~~~~p~~--------~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~ 132 (326)
T 3ga7_A 63 TRTCAVPTP-YG-DVTTRLYSPQP--------TSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQA 132 (326)
T ss_dssp EEEEEECCT-TS-CEEEEEEESSS--------SCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTS
T ss_pred eEEEEeecC-CC-CeEEEEEeCCC--------CCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCC
Confidence 378888887 77 89999999965 1239999999986432 23445667788888 7999999999987654
Q ss_pred chhHHHhhccCCCcccHHHHHHHHHHHHhCC---CCCCCcEEEEEcChHHHHHHHHHh-CCC------cceEEEEecccc
Q 004816 536 GREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALA-FRD------TFKAGASLYGVA 605 (729)
Q Consensus 536 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~-~~~------~~~a~v~~~~~~ 605 (729)
... ..++|+.++++|+.+.. .+|++||+|+|+|+||++|+.++. +++ .++++++.+|+.
T Consensus 133 ~~~-----------~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~ 201 (326)
T 3ga7_A 133 RYP-----------QAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLY 201 (326)
T ss_dssp CTT-----------HHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCC
T ss_pred CCC-----------cHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEecccc
Confidence 311 23689999999998863 578999999999999999999886 554 389999999987
Q ss_pred ChhHHhhh---c---chh----hhhhhhhhcCChhhhhhcCcc-----cccCCCCCCEEEEEeCCCCCCChHHHHHHHHH
Q 004816 606 DLSMLRAE---T---HKF----ESRYIDNLVGSEKDYYEKSPI-----NFVDKFSCPIILFQGLEDKVVPPDQARKIYKA 670 (729)
Q Consensus 606 d~~~~~~~---~---~~~----~~~~~~~~~~~~~~~~~~sp~-----~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~ 670 (729)
+....... . ... ...+......... ...+|. ..+.+..+|+|++||+.|.++ .++.+++++
T Consensus 202 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~~~ 277 (326)
T 3ga7_A 202 GLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDE--DRESPWYCLFNNDLTRDVPPCFIASAEFDPLI--DDSRLLHQT 277 (326)
T ss_dssp SCSCCHHHHHCCCTTTTCCHHHHHHHHHHHCSSGG--GGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH--HHHHHHHHH
T ss_pred ccCCChhHhhhcCCCCCCCHHHHHHHHHHhCCCCC--ccCCcccCCCcchhhcCCCCEEEEecCcCcCH--HHHHHHHHH
Confidence 65321100 0 000 0111111111111 111222 123345679999999999987 589999999
Q ss_pred HHhCCCCEEEEEECCCCcccCCc----ccHHHHHHHHHHHHHHHhC
Q 004816 671 LKENGLPVALVEYEGEQHGFRKA----ENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 671 l~~~g~~~~~~~~~~~gH~~~~~----~~~~~~~~~~~~fl~~~l~ 712 (729)
|+++|+++++++|++++|+|... +...+.++.+.+||+++++
T Consensus 278 l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~ 323 (326)
T 3ga7_A 278 LQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMK 323 (326)
T ss_dssp HHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998532 3457899999999999986
No 30
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.89 E-value=9.1e-23 Score=202.61 Aligned_cols=211 Identities=16% Similarity=0.204 Sum_probs=162.0
Q ss_pred EEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhH
Q 004816 460 LIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREF 539 (729)
Q Consensus 460 ~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~ 539 (729)
.+++.+. +|..+.++++.|.+ ++.|+||++||..+. ...+...++.|+++||.|+++|+||.+..+...
T Consensus 5 ~~~~~~~-~g~~l~~~~~~p~~--------~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~ 73 (236)
T 1zi8_A 5 GISIQSY-DGHTFGALVGSPAK--------APAPVIVIAQDIFGV--NAFMRETVSWLVDQGYAAVCPDLYARQAPGTAL 73 (236)
T ss_dssp TCCEECT-TSCEECEEEECCSS--------CSEEEEEEECCTTBS--CHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBC
T ss_pred eEEEecC-CCCeEEEEEECCCC--------CCCCEEEEEcCCCCC--CHHHHHHHHHHHhCCcEEEeccccccCCCcccc
Confidence 3456666 89999999998853 456899999997443 335667888999999999999999876544211
Q ss_pred HH-------h----hccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccCh
Q 004816 540 RE-------R----LLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADL 607 (729)
Q Consensus 540 ~~-------~----~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~ 607 (729)
.. . ..........+|+.++++++.++..++ ++++++|||+||.+++.++. +| ++++++.+|....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~ 150 (236)
T 1zi8_A 74 DPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE 150 (236)
T ss_dssp CTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG
T ss_pred cccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc
Confidence 00 0 000011123789999999998876545 69999999999999999998 66 8999988875321
Q ss_pred hHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCC
Q 004816 608 SMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQ 687 (729)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~g 687 (729)
++...+.++++|+|+++|++|..+|++++.++++.++.++ +++++++++++
T Consensus 151 ----------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 201 (236)
T 1zi8_A 151 ----------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANP-LLQVHWYEEAG 201 (236)
T ss_dssp ----------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCT-TEEEEEETTCC
T ss_pred ----------------------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC-CceEEEECCCC
Confidence 1223456778999999999999999999999999998766 89999999999
Q ss_pred cccCCc-------ccHHHHHHHHHHHHHHHhCC
Q 004816 688 HGFRKA-------ENIKFTLEQQMVFFARVVGH 713 (729)
Q Consensus 688 H~~~~~-------~~~~~~~~~~~~fl~~~l~~ 713 (729)
|.+... +...+.++.+.+||+++++.
T Consensus 202 H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 202 HSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp TTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred cccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 987643 23467889999999999874
No 31
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.89 E-value=3.4e-22 Score=196.40 Aligned_cols=209 Identities=17% Similarity=0.123 Sum_probs=162.5
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCc
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 536 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g 536 (729)
..+.+.+.. +|.++.++++.|.+ +.|+||++||.+.....+.+...++.|+++||.|+.+|+||.+
T Consensus 11 ~~~~~~~~~--~g~~l~~~~~~p~~---------~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g--- 76 (223)
T 2o2g_A 11 QEYAVSVSV--GEVKLKGNLVIPNG---------ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQE--- 76 (223)
T ss_dssp CEEEEEEEE--TTEEEEEEEECCTT---------CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHH---
T ss_pred eeeEEEEec--CCeEEEEEEecCCC---------CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcC---
Confidence 356777776 79999999998854 4689999999865554445566788899999999999999643
Q ss_pred hhHHHhhcc--CCC-cccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhh
Q 004816 537 REFRERLLG--RWG-IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRA 612 (729)
Q Consensus 537 ~~~~~~~~~--~~~-~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~ 612 (729)
.+....... ... ....+|+.++++++..+..+|.++++++|||+||.+++.++. +|++++++|+.+|..++..
T Consensus 77 ~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~--- 153 (223)
T 2o2g_A 77 EEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLAP--- 153 (223)
T ss_dssp HHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGCT---
T ss_pred CCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcCH---
Confidence 332221110 011 122688999999999988889999999999999999999988 8999999999998654310
Q ss_pred hcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCC
Q 004816 613 ETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRK 692 (729)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~ 692 (729)
..+.++++|+|+++|++|..+|.. ..+.+++.+.+++++++++++|.+..
T Consensus 154 --------------------------~~~~~~~~P~l~i~g~~D~~~~~~----~~~~~~~~~~~~~~~~~~~~~H~~~~ 203 (223)
T 2o2g_A 154 --------------------------SALPHVKAPTLLIVGGYDLPVIAM----NEDALEQLQTSKRLVIIPRASHLFEE 203 (223)
T ss_dssp --------------------------TTGGGCCSCEEEEEETTCHHHHHH----HHHHHHHCCSSEEEEEETTCCTTCCS
T ss_pred --------------------------HHHhcCCCCEEEEEccccCCCCHH----HHHHHHhhCCCeEEEEeCCCCcccCC
Confidence 234567899999999999988643 34455566678999999999999877
Q ss_pred cccHHHHHHHHHHHHHHHhC
Q 004816 693 AENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 693 ~~~~~~~~~~~~~fl~~~l~ 712 (729)
++...+..+.+.+||+++|+
T Consensus 204 ~~~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 204 PGALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp TTHHHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHHHhcC
Confidence 67778899999999999874
No 32
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.89 E-value=5.5e-23 Score=210.38 Aligned_cols=242 Identities=16% Similarity=0.177 Sum_probs=165.1
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcccc-chhhhHHHhhCCcEEEEecC--CCCCC
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTSRGWAFVDVNY--GGSTG 534 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~-~~~~~~~la~~G~~v~~~d~--rGs~g 534 (729)
.+.+++.+...|..+.+.++.|++.. .++.|+||++||+++...... +....+.++++||.|+++|+ ||.++
T Consensus 16 ~~~~~~~s~~~~~~~~~~v~~P~~~~-----~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~ 90 (282)
T 3fcx_A 16 QKVFEHDSVELNCKMKFAVYLPPKAE-----TGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNI 90 (282)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGG-----TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC
T ss_pred EEEEEEEchhcCCeeEEEEEcCCCCC-----CCCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCcccc
Confidence 34556655547899999999997622 357899999999865543221 11235778899999999999 88776
Q ss_pred CchhH-----------HHhhccCCCc--ccHHHH-HHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEE
Q 004816 535 YGREF-----------RERLLGRWGI--VDVNDC-CSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGA 599 (729)
Q Consensus 535 ~g~~~-----------~~~~~~~~~~--~~~~D~-~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v 599 (729)
.|... .......+.. ....++ ..+++++.++..+|++||+|+|+|+||++|+.++. +|++|++++
T Consensus 91 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 170 (282)
T 3fcx_A 91 KGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVS 170 (282)
T ss_dssp --------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEE
T ss_pred ccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEE
Confidence 54331 1100000000 112223 34555665555578899999999999999999998 899999999
Q ss_pred EeccccChhHHhhhcchhhhhhhhhhcC-ChhhhhhcCcccccCCC---CCCEEEEEeCCCCCCChHH--HHHHHHHHHh
Q 004816 600 SLYGVADLSMLRAETHKFESRYIDNLVG-SEKDYYEKSPINFVDKF---SCPIILFQGLEDKVVPPDQ--ARKIYKALKE 673 (729)
Q Consensus 600 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~sp~~~~~~i---~~PvL~i~G~~D~~vp~~~--~~~~~~~l~~ 673 (729)
+.+|+.+....... .......++ ....+...+|...+.++ ++|+|++||++|.++|..+ +++++++|++
T Consensus 171 ~~s~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~~l~~ 245 (282)
T 3fcx_A 171 AFAPICNPVLCPWG-----KKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTE 245 (282)
T ss_dssp EESCCCCGGGSHHH-----HHHHHHHHC---CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHHHHHHH
T ss_pred EeCCccCcccCchh-----HHHHHHhcCCchhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHHHHHHH
Confidence 99998876432111 111111222 23345555665554444 7899999999999986654 6699999999
Q ss_pred CCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 674 NGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 674 ~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
+|.+++++++|+++|.|. .+...+...++|+.++|+
T Consensus 246 ~g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 246 KKIPVVFRLQEDYDHSYY---FIATFITDHIRHHAKYLN 281 (282)
T ss_dssp TTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHTT
T ss_pred cCCceEEEECCCCCcCHH---HHHhhhHHHHHHHHHhhc
Confidence 999999999999999873 455778888999999875
No 33
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.89 E-value=3e-22 Score=209.16 Aligned_cols=221 Identities=16% Similarity=0.123 Sum_probs=159.5
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcc-ccchhhhHHHhh-CCcEEEEecCCCCCCCchhHHHhhccCCC
Q 004816 471 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR-GILNLSIQYWTS-RGWAFVDVNYGGSTGYGREFRERLLGRWG 548 (729)
Q Consensus 471 ~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~~~~~la~-~G~~v~~~d~rGs~g~g~~~~~~~~~~~~ 548 (729)
.+.++++.|.+ .++.|+||++|||++.... ..+......++. .||.|+.+|||+++++..
T Consensus 66 ~i~~~~~~p~~-------~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~----------- 127 (322)
T 3fak_A 66 GCAAEWVRAPG-------CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPF----------- 127 (322)
T ss_dssp TEEEEEEECTT-------CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSCT-----------
T ss_pred CeEEEEEeCCC-------CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCCC-----------
Confidence 37888898865 3567999999998653322 234455666666 599999999998765431
Q ss_pred cccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCC----cceEEEEeccccChhHHhhhcch-------
Q 004816 549 IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRD----TFKAGASLYGVADLSMLRAETHK------- 616 (729)
Q Consensus 549 ~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~----~~~a~v~~~~~~d~~~~~~~~~~------- 616 (729)
...++|+.++++|+.++ .+|++||+|+|+|+||++|+.++. .++ .++++|+++|+.++.........
T Consensus 128 ~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~ 206 (322)
T 3fak_A 128 PAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEADPM 206 (322)
T ss_dssp THHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHHTTTTCCS
T ss_pred CcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHHhCccCcc
Confidence 13479999999999998 678999999999999999998886 443 49999999999886432111000
Q ss_pred ----hhhhhhhhhcC-ChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccC
Q 004816 617 ----FESRYIDNLVG-SEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFR 691 (729)
Q Consensus 617 ----~~~~~~~~~~~-~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~ 691 (729)
....+.....+ ........+|+.......+|+||+||+.|.+ ..++.+++++|+.+|+++++++||+++|+|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~--~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~ 284 (322)
T 3fak_A 207 VAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVL--LDDSIKLDAKAKADGVKSTLEIWDDMIHVWH 284 (322)
T ss_dssp CCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTT--HHHHHHHHHHHHHTTCCEEEEEETTCCTTGG
T ss_pred cCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCcc--HHHHHHHHHHHHHcCCCEEEEEeCCceeehh
Confidence 00011111111 1111223455533333336999999999977 5789999999999999999999999999875
Q ss_pred C----cccHHHHHHHHHHHHHHHhC
Q 004816 692 K----AENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 692 ~----~~~~~~~~~~~~~fl~~~l~ 712 (729)
. .+...+.++.+.+||+++|+
T Consensus 285 ~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3fak_A 285 AFHPMLPEGKQAIVRVGEFMREQWA 309 (322)
T ss_dssp GGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHh
Confidence 3 34467889999999999997
No 34
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.89 E-value=5.3e-22 Score=212.45 Aligned_cols=218 Identities=25% Similarity=0.323 Sum_probs=169.1
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccch--------h--hhHHHhhCCcEEEEe
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN--------L--SIQYWTSRGWAFVDV 527 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~--------~--~~~~la~~G~~v~~~ 527 (729)
.+.+.+....+|..+.++++.|.+.. +.+++|+||++||+++........ . ...+....|+.|+.+
T Consensus 144 ~~~~~~~~~~dg~~l~~~v~~P~~~~----~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~p 219 (380)
T 3doh_A 144 FLAFTFKDPETGVEIPYRLFVPKDVN----PDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAP 219 (380)
T ss_dssp EEEEEEECTTTCCEEEEEEECCSSCC----TTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEE
T ss_pred ccceeeccCCCCcEEEEEEEcCCCCC----CCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEe
Confidence 45666766337889999999998732 356789999999986543222111 1 122345678999999
Q ss_pred cCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccC
Q 004816 528 NYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVAD 606 (729)
Q Consensus 528 d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d 606 (729)
|++|.++++..|........+..+.+|+.++++++.++..+|++||+|+|||+||++++.++. +|++|+++++.+|..+
T Consensus 220 d~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~ 299 (380)
T 3doh_A 220 QCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGD 299 (380)
T ss_dssp CCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred cCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCC
Confidence 999998888877654444444567899999999999988889999999999999999998887 9999999999999863
Q ss_pred hhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCC-CCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECC
Q 004816 607 LSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFS-CPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEG 685 (729)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~-~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 685 (729)
.. .+.+++ +|+|++||++|..+|++++.+++++|+++|.++++++||+
T Consensus 300 ~~-------------------------------~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 348 (380)
T 3doh_A 300 VS-------------------------------KVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEK 348 (380)
T ss_dssp GG-------------------------------GGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECT
T ss_pred hh-------------------------------hhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecC
Confidence 21 122233 8999999999999999999999999999999999999999
Q ss_pred C---CcccCCcccHHHHHH--HHHHHHHHH
Q 004816 686 E---QHGFRKAENIKFTLE--QQMVFFARV 710 (729)
Q Consensus 686 ~---gH~~~~~~~~~~~~~--~~~~fl~~~ 710 (729)
+ +|+|.....+...+. .+++||.++
T Consensus 349 ~~h~~h~~~~H~~~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 349 GFMEKHGWDPHGSWIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp THHHHTTCCTTCTHHHHHTCHHHHHHHHTC
T ss_pred CcccCCCCCCchhHHHhcCCHHHHHHHHhh
Confidence 9 454443345556666 889999875
No 35
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.88 E-value=1.3e-21 Score=190.52 Aligned_cols=200 Identities=17% Similarity=0.177 Sum_probs=155.0
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCC---CCCccccchhhhHHHhhCCcEEEEecCCCCC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGP---TSEARGILNLSIQYWTSRGWAFVDVNYGGST 533 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~---~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~ 533 (729)
..+.+.+.+. +| ++.++++.|.+ .++.|+||++||++ +......+..+++.|+++||.|+.+|+||.+
T Consensus 5 ~~~~~~~~~~-~g-~l~~~~~~p~~-------~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g 75 (208)
T 3trd_A 5 TNEDFLIQGP-VG-QLEVMITRPKG-------IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVG 75 (208)
T ss_dssp SSSCEEEECS-SS-EEEEEEECCSS-------CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTST
T ss_pred ccceEEEECC-Cc-eEEEEEEcCCC-------CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCC
Confidence 4677888887 88 99999998865 34679999999953 2333344567888999999999999999876
Q ss_pred CCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHhCCCcceEEEEeccccChhHHhhh
Q 004816 534 GYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVADLSMLRAE 613 (729)
Q Consensus 534 g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~~~~~a~v~~~~~~d~~~~~~~ 613 (729)
.....+ .......+|+.++++++.++ .+.++++++|||+||.+++.++.+| +++++|+.+|..+...
T Consensus 76 ~s~~~~------~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~-~v~~~v~~~~~~~~~~---- 142 (208)
T 3trd_A 76 KSQGRY------DNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVAYDQ-KVAQLISVAPPVFYEG---- 142 (208)
T ss_dssp TCCSCC------CTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHHHHS-CCSEEEEESCCTTSGG----
T ss_pred CCCCCc------cchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHhccC-CccEEEEeccccccCC----
Confidence 544321 12234589999999999887 4458999999999999999999766 8999999998762110
Q ss_pred cchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCc
Q 004816 614 THKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKA 693 (729)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~ 693 (729)
...+..+++|+|+++|++|.++|++++.++++.+.. +++++++++++|.+...
T Consensus 143 ------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~ 195 (208)
T 3trd_A 143 ------------------------FASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISS---PVEFVVMSGASHFFHGR 195 (208)
T ss_dssp ------------------------GTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSS---CCEEEEETTCCSSCTTC
T ss_pred ------------------------chhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccC---ceEEEEeCCCCCccccc
Confidence 122445589999999999999999999988887764 37999999999987643
Q ss_pred ccHHHHHHHHHHHH
Q 004816 694 ENIKFTLEQQMVFF 707 (729)
Q Consensus 694 ~~~~~~~~~~~~fl 707 (729)
..+..+.+.+||
T Consensus 196 --~~~~~~~i~~fl 207 (208)
T 3trd_A 196 --LIELRELLVRNL 207 (208)
T ss_dssp --HHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHh
Confidence 356666666665
No 36
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.88 E-value=8.2e-22 Score=199.94 Aligned_cols=232 Identities=16% Similarity=0.195 Sum_probs=166.9
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCc
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 536 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g 536 (729)
..+.+.+.. +|.++.++++.|.+ ++.|+||++||.++......+..++..|+++||.|+++|+||.|...
T Consensus 21 ~~~~~~~~~--~g~~l~~~~~~p~~--------~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~ 90 (270)
T 3pfb_A 21 GMATITLER--DGLQLVGTREEPFG--------EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSD 90 (270)
T ss_dssp EEEEEEEEE--TTEEEEEEEEECSS--------SSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSS
T ss_pred cceEEEecc--CCEEEEEEEEcCCC--------CCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCC
Confidence 345555654 89999999998854 34689999999866544455777888999999999999999876654
Q ss_pred hhHHHhhccCCC-cccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhc
Q 004816 537 REFRERLLGRWG-IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAET 614 (729)
Q Consensus 537 ~~~~~~~~~~~~-~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~ 614 (729)
..... +. ....+|+.++++++.++.. .++++|+|||+||++++.++. +|++++++|+.+|..+........
T Consensus 91 ~~~~~-----~~~~~~~~d~~~~i~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~ 163 (270)
T 3pfb_A 91 GKFEN-----MTVLNEIEDANAILNYVKTDPH--VRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEG 163 (270)
T ss_dssp SCGGG-----CCHHHHHHHHHHHHHHHHTCTT--EEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHT
T ss_pred CCCCc-----cCHHHHHHhHHHHHHHHHhCcC--CCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhh
Confidence 32111 11 1237889999999988643 359999999999999999988 999999999999987654322111
Q ss_pred chhhhhhhhhhcC-------------ChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEE
Q 004816 615 HKFESRYIDNLVG-------------SEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALV 681 (729)
Q Consensus 615 ~~~~~~~~~~~~~-------------~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~ 681 (729)
......+...... ....+...++...+.++++|+|+++|++|.++|++.+.++.+.+. +++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~ 239 (270)
T 3pfb_A 164 NTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQ----NSTLH 239 (270)
T ss_dssp EETTEECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCS----SEEEE
T ss_pred hhhccccCcccccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCC----CCeEE
Confidence 0000000000000 012233345556678899999999999999999999988887754 57999
Q ss_pred EECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 682 EYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 682 ~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
+++++||.+. .+...++.+.+.+||.++
T Consensus 240 ~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 240 LIEGADHCFS-DSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp EETTCCTTCC-THHHHHHHHHHHHHHC--
T ss_pred EcCCCCcccC-ccchHHHHHHHHHHHhhc
Confidence 9999999875 456677888888888764
No 37
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.88 E-value=2.9e-22 Score=205.03 Aligned_cols=207 Identities=18% Similarity=0.232 Sum_probs=144.0
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
.+.||++||.+++ ...|..+++.|+++||.|+++|+||.|.+...... ..+ ....+|+.+++++|.+. .+
T Consensus 51 ~~~VlllHG~~~s--~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~---~~~-~~~~~d~~~~~~~l~~~----~~ 120 (281)
T 4fbl_A 51 RIGVLVSHGFTGS--PQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAA---STA-SDWTADIVAAMRWLEER----CD 120 (281)
T ss_dssp SEEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHT---CCH-HHHHHHHHHHHHHHHHH----CS
T ss_pred CceEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEECCCCCCCCCccccC---CCH-HHHHHHHHHHHHHHHhC----CC
Confidence 4568999997443 34577889999999999999999976654322211 111 11267889999998765 36
Q ss_pred cEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhh---hhcC---C---hhhhhhcC-----
Q 004816 572 RLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYID---NLVG---S---EKDYYEKS----- 636 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~---~~~~---~---~~~~~~~s----- 636 (729)
+++|+||||||.+++.++. +|++++++|+.++...+.........+...... .... . .+......
T Consensus 121 ~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (281)
T 4fbl_A 121 VLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPVPAI 200 (281)
T ss_dssp EEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEGGGH
T ss_pred eEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCchHHH
Confidence 8999999999999999998 999999999999876543211100000000000 0000 0 00000000
Q ss_pred ---------cccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHH
Q 004816 637 ---------PINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFF 707 (729)
Q Consensus 637 ---------p~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl 707 (729)
....+.+|++|+|+++|++|.++|+++++.+++.+.. .+++++++|++||.+......+++.+.+.+||
T Consensus 201 ~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~--~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL 278 (281)
T 4fbl_A 201 KHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGS--TEKELLWLENSYHVATLDNDKELILERSLAFI 278 (281)
T ss_dssp HHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCC--SSEEEEEESSCCSCGGGSTTHHHHHHHHHHHH
T ss_pred HHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCC--CCcEEEEECCCCCcCccccCHHHHHHHHHHHH
Confidence 1123678999999999999999999999999988753 46799999999998765555778889999999
Q ss_pred HHH
Q 004816 708 ARV 710 (729)
Q Consensus 708 ~~~ 710 (729)
++|
T Consensus 279 ~~H 281 (281)
T 4fbl_A 279 RKH 281 (281)
T ss_dssp HTC
T ss_pred HhC
Confidence 976
No 38
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.87 E-value=1.1e-21 Score=204.12 Aligned_cols=237 Identities=21% Similarity=0.248 Sum_probs=168.4
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCc
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 536 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g 536 (729)
..+.+++.+. +|..+.++++.|.+ .++.|+||++||+++.. ...+.. ...++++||.|+++|+||.+++.
T Consensus 55 ~~~~~~~~~~-~g~~i~~~~~~P~~-------~~~~p~vv~~HG~~~~~-~~~~~~-~~~l~~~g~~v~~~d~rg~g~s~ 124 (318)
T 1l7a_A 55 KVYRLTYKSF-GNARITGWYAVPDK-------EGPHPAIVKYHGYNASY-DGEIHE-MVNWALHGYATFGMLVRGQQRSE 124 (318)
T ss_dssp EEEEEEEEEG-GGEEEEEEEEEESS-------CSCEEEEEEECCTTCCS-GGGHHH-HHHHHHTTCEEEEECCTTTSSSC
T ss_pred EEEEEEEEcc-CCCEEEEEEEeeCC-------CCCccEEEEEcCCCCCC-CCCccc-ccchhhCCcEEEEecCCCCCCCC
Confidence 4577888887 89999999999965 35679999999986540 222333 34778899999999999988765
Q ss_pred hhHHHhhc-----cCCC---------cccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEe
Q 004816 537 REFRERLL-----GRWG---------IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASL 601 (729)
Q Consensus 537 ~~~~~~~~-----~~~~---------~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~ 601 (729)
..+..... ...+ ...++|+.++++++.++..+|.++|+++|||+||.+++.++. +|+ ++++|+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~ 203 (318)
T 1l7a_A 125 DTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVAD 203 (318)
T ss_dssp CCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEE
T ss_pred CcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEec
Confidence 44211000 0001 123789999999999988788899999999999999999988 664 7888888
Q ss_pred cccc-ChhHHhhhcc--hhh--hhhhhhhc---CC---hhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHH
Q 004816 602 YGVA-DLSMLRAETH--KFE--SRYIDNLV---GS---EKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKA 670 (729)
Q Consensus 602 ~~~~-d~~~~~~~~~--~~~--~~~~~~~~---~~---~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~ 670 (729)
+|.. ++........ .+. ..++.... .. .......++...+.++++|+|+++|++|.++|++++.++++.
T Consensus 204 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~ 283 (318)
T 1l7a_A 204 YPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNH 283 (318)
T ss_dssp SCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred CCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhh
Confidence 8854 3433221110 000 01111000 00 112223456667888899999999999999999999999888
Q ss_pred HHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 671 LKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 671 l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
+.. +++++++++++|.+. .+..+.+.+||.++|+
T Consensus 284 l~~---~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 284 LET---KKELKVYRYFGHEYI-----PAFQTEKLAFFKQILK 317 (318)
T ss_dssp CCS---SEEEEEETTCCSSCC-----HHHHHHHHHHHHHHHC
T ss_pred cCC---CeeEEEccCCCCCCc-----chhHHHHHHHHHHHhC
Confidence 764 589999999999832 3568889999999986
No 39
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.87 E-value=7.8e-22 Score=201.70 Aligned_cols=243 Identities=14% Similarity=0.156 Sum_probs=169.0
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccc-hhhhHHHhhCCcEEEEecCCCCCC-
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWTSRGWAFVDVNYGGSTG- 534 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~-~~~~~~la~~G~~v~~~d~rGs~g- 534 (729)
..+.+++.+..+|..+.+.+|.|++.. +.++.|+||++||+++....+.. ....+.+++.||.|+.+|.++.+.
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~~~----~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~ 91 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQAS----TGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEG 91 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG----TTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTT
T ss_pred cEEEEEEeccccCCeeEEEEEeCCCCC----CCCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccc
Confidence 346667766557899999999997632 25678999999998655432211 114566677899999999874332
Q ss_pred ----------CchhHH-HhhccCCCc-cc-HHHH-HHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEE
Q 004816 535 ----------YGREFR-ERLLGRWGI-VD-VNDC-CSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGA 599 (729)
Q Consensus 535 ----------~g~~~~-~~~~~~~~~-~~-~~D~-~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v 599 (729)
.|..+. ......+.. .. .+.+ ..+++++.+...+ ++|++|+|||+||++|+.++. +|++|++++
T Consensus 92 ~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 170 (280)
T 3i6y_A 92 VADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVS 170 (280)
T ss_dssp CCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEE
T ss_pred cCcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEE
Confidence 111111 100001100 01 1222 2445555554433 589999999999999999998 999999999
Q ss_pred EeccccChhHHhhhcchhhhhhhhhhcC-ChhhhhhcCcccccCCCC--CCEEEEEeCCCCCCChHH-HHHHHHHHHhCC
Q 004816 600 SLYGVADLSMLRAETHKFESRYIDNLVG-SEKDYYEKSPINFVDKFS--CPIILFQGLEDKVVPPDQ-ARKIYKALKENG 675 (729)
Q Consensus 600 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~sp~~~~~~i~--~PvL~i~G~~D~~vp~~~-~~~~~~~l~~~g 675 (729)
+.+|+.+...... ........++ +...+...+|...+.+++ +|+|++||++|.+++.+. +++++++|++.|
T Consensus 171 ~~s~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g 245 (280)
T 3i6y_A 171 AFSPINNPVNCPW-----GQKAFTAYLGKDTDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNN 245 (280)
T ss_dssp EESCCCCGGGSHH-----HHHHHHHHHCSCGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTT
T ss_pred EeCCccccccCch-----HHHHHHHhcCCchHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHcC
Confidence 9999887653211 1111122222 445666778877777665 899999999999998755 899999999999
Q ss_pred CCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 676 LPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 676 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
++++++++|+++|.+ ..+...++..++|+.++|+
T Consensus 246 ~~~~~~~~~g~~H~~---~~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 246 YPLELRSHEGYDHSY---YFIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp CCEEEEEETTCCSSH---HHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEeCCCCccH---HHHHHhHHHHHHHHHhhcc
Confidence 999999999999986 3456788899999999886
No 40
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.87 E-value=4.5e-21 Score=205.63 Aligned_cols=311 Identities=12% Similarity=0.088 Sum_probs=200.9
Q ss_pred ceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEEEEe
Q 004816 93 GTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKHS 171 (729)
Q Consensus 93 ~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~d 171 (729)
.|.||| |+.++|...+ +++..||.++.. +++.++++...... .....|+++++.|+|... +..||++|
T Consensus 40 ~~~~SpDg~~l~~~~~~---~g~~~l~~~d~~-~g~~~~lt~~~~~~------~~~~~~spdg~~l~~~~~-~~~l~~~d 108 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAF---DGPWNYYLLDLN-TQVATQLTEGRGDN------TFGGFLSPDDDALFYVKD-GRNLMRVD 108 (388)
T ss_dssp SCCBCTTSCEEEEEECT---TSSCEEEEEETT-TCEEEECCCSSCBC------SSSCEECTTSSEEEEEET-TTEEEEEE
T ss_pred CccCCCCCCEEEEEEcC---CCCceEEEEeCC-CCceEEeeeCCCCC------ccceEEcCCCCEEEEEeC-CCeEEEEE
Confidence 489999 9999998752 456678888876 34677777543111 012357777778888874 45899999
Q ss_pred CCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCC-------------CCCcceEEEEEEcCCCceEEeee
Q 004816 172 IDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD-------------ALNSTTEIVAIALNGQNIQVLVS 238 (729)
Q Consensus 172 ~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~-------------~~~~~~~l~~~dl~~g~~~~lt~ 238 (729)
+++ ++.+++...+.. ........++|||+.+++........ .......||++|+++++.++++.
T Consensus 109 ~~~--g~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 185 (388)
T 3pe7_A 109 LAT--LEENVVYQVPAE-WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ 185 (388)
T ss_dssp TTT--CCEEEEEECCTT-EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE
T ss_pred CCC--Ccceeeeechhh-cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec
Confidence 998 777766654211 11122334699999988765432210 01123789999999999999988
Q ss_pred CCCeeeeeeeCC-CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEe
Q 004816 239 GSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTD 316 (729)
Q Consensus 239 ~~~~~~~~~~SP-DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~ 316 (729)
.......+.||| ||++|+|+...... ....+||++|++ +++. ..+..... . ..+..+.|||||+ |+|.+.
T Consensus 186 ~~~~~~~~~~sp~dg~~l~~~~~~~~~--~~~~~l~~~d~~-~~~~--~~l~~~~~-~--~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 186 ENQWLGHPIYRPYDDSTVAFCHEGPHD--LVDARMWLINED-GTNM--RKVKTHAE-G--ESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp ESSCEEEEEEETTEEEEEEEEECSCTT--TSSCSEEEEETT-SCCC--EESCCCCT-T--EEEEEEEECTTSSCEEEEEE
T ss_pred CCccccccEECCCCCCEEEEEEecCCC--CCcceEEEEeCC-CCce--EEeeeCCC-C--cccccceECCCCCEEEEEec
Confidence 777788899999 99999999843211 124579999987 5543 22222221 1 2345789999999 988887
Q ss_pred cCCCce--EEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEE------CCeEEEEEEECCCC
Q 004816 317 RKNGFW--NLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ------NGRSYLGILDDFGH 388 (729)
Q Consensus 317 ~~~g~~--~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~------~g~~~ly~~d~~~g 388 (729)
. .+.. .|+++|+++++.+.++..... ....+. .....|.+ |++.|++...+ .+...||+++++++
T Consensus 258 ~-~~~~~~~l~~~d~~~g~~~~l~~~~~~-~~~~~~--~~~~~~sp---dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 258 L-KGSPDRFIYSADPETLENRQLTSMPAC-SHLMSN--YDGSLMVG---DGSDAPVDVQDDSGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp E-TTCCCEEEEEECTTTCCEEEEEEECCE-EEEEEC--TTSSEEEE---EECCC------------CCCCEEEEEETTTT
T ss_pred C-CCCCcceEEEEecCCCceEEEEcCCCc-eeeeec--CCCCeEcc---CCCcceeEeeeccccccCCCCEEEEEeccCC
Confidence 6 4543 599999999998888743320 000111 11123333 77778777644 66778999999999
Q ss_pred ceEeeccCCc-----------ceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 389 SLSLLDIPFT-----------DIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 389 ~~~~lt~~~~-----------~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
+.++|+.... .+..+ ..++++.+++.+......+||++++..+.
T Consensus 331 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 331 TQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPESV 386 (388)
T ss_dssp EEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCGGG
T ss_pred ceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECChhc
Confidence 9998886654 23333 33444444555566677789999987664
No 41
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.87 E-value=1.4e-21 Score=203.08 Aligned_cols=236 Identities=16% Similarity=0.190 Sum_probs=168.7
Q ss_pred CCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCC-CccccchhhhHHHhhC-CcEEEEecCCCC
Q 004816 455 FSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSR-GWAFVDVNYGGS 532 (729)
Q Consensus 455 ~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~la~~-G~~v~~~d~rGs 532 (729)
....+.+++... +| .+.+++|.|.+. .++.|+||++|||++. .....+...+..|+++ ||.|+.+||||.
T Consensus 45 ~~~~~~~~i~~~-~g-~l~~~~~~P~~~------~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~ 116 (310)
T 2hm7_A 45 VAEVREFDMDLP-GR-TLKVRMYRPEGV------EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLA 116 (310)
T ss_dssp CSEEEEEEEEET-TE-EEEEEEEECTTC------CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCT
T ss_pred cceEEEEEeccC-CC-eEEEEEEecCCC------CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCC
Confidence 345677888886 55 999999999651 3457999999997643 3344567778888886 999999999987
Q ss_pred CCCchhHHHhhccCCCcccHHHHHHHHHHHHhCC---CCCCCcEEEEEcChHHHHHHHHHh-CCC----cceEEEEeccc
Q 004816 533 TGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALA-FRD----TFKAGASLYGV 604 (729)
Q Consensus 533 ~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~-~~~----~~~a~v~~~~~ 604 (729)
+++... ...+|+.++++|+.+.. .+|.++++|+|||+||.+++.++. +++ +++++|+.+|.
T Consensus 117 ~~~~~~-----------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~ 185 (310)
T 2hm7_A 117 PEHKFP-----------AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPS 185 (310)
T ss_dssp TTSCTT-----------HHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCC
T ss_pred CCCCCC-----------ccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCC
Confidence 764321 23689999999998874 367789999999999999999887 554 79999999998
Q ss_pred cChh--H----Hhhhcc--hh----hhhhhhhhcCChh--hhhhcCcccc--cCCCCCCEEEEEeCCCCCCChHHHHHHH
Q 004816 605 ADLS--M----LRAETH--KF----ESRYIDNLVGSEK--DYYEKSPINF--VDKFSCPIILFQGLEDKVVPPDQARKIY 668 (729)
Q Consensus 605 ~d~~--~----~~~~~~--~~----~~~~~~~~~~~~~--~~~~~sp~~~--~~~i~~PvL~i~G~~D~~vp~~~~~~~~ 668 (729)
.+.. . +..... .. ...+......... .....+|+.. +..+ +|+|+++|++|.++ .++.+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~~--~~~~~~~ 262 (310)
T 2hm7_A 186 TGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPLR--DVGKLYA 262 (310)
T ss_dssp CCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTTH--HHHHHHH
T ss_pred cCCCcccCCcchhhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCch--HHHHHHH
Confidence 7754 1 100000 00 0011111111111 1112344432 2333 49999999999987 6789999
Q ss_pred HHHHhCCCCEEEEEECCCCcccCC----cccHHHHHHHHHHHHHHHhC
Q 004816 669 KALKENGLPVALVEYEGEQHGFRK----AENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 669 ~~l~~~g~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~~fl~~~l~ 712 (729)
+.|+.+|.+++++++++++|+|.. .+...++.+.+.+||+++++
T Consensus 263 ~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 263 EALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp HHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999998753 24457888999999999874
No 42
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.87 E-value=5.3e-22 Score=209.72 Aligned_cols=234 Identities=19% Similarity=0.234 Sum_probs=168.4
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCc
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 536 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g 536 (729)
..+.+.+.+. +|.++.++++.|.+ .++.|+||++||+++... .+.... .++++||.|+++|+||.++++
T Consensus 81 ~~~~~~~~~~-~g~~l~~~~~~P~~-------~~~~p~vv~~HG~g~~~~--~~~~~~-~~~~~G~~v~~~D~rG~g~s~ 149 (346)
T 3fcy_A 81 ECYDLYFTGV-RGARIHAKYIKPKT-------EGKHPALIRFHGYSSNSG--DWNDKL-NYVAAGFTVVAMDVRGQGGQS 149 (346)
T ss_dssp EEEEEEEECG-GGCEEEEEEEEESC-------SSCEEEEEEECCTTCCSC--CSGGGH-HHHTTTCEEEEECCTTSSSSC
T ss_pred EEEEEEEEcC-CCCEEEEEEEecCC-------CCCcCEEEEECCCCCCCC--Chhhhh-HHHhCCcEEEEEcCCCCCCCC
Confidence 4577888887 89999999999975 356799999999865543 333333 567899999999999988655
Q ss_pred hhHHHhhc----c--CCCc----------ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEE
Q 004816 537 REFRERLL----G--RWGI----------VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGA 599 (729)
Q Consensus 537 ~~~~~~~~----~--~~~~----------~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v 599 (729)
........ + ..+. ..++|+.++++++.....+|.+||+++|||+||++++.++. +|+ ++++|
T Consensus 150 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~v 228 (346)
T 3fcy_A 150 QDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVV 228 (346)
T ss_dssp CCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEE
T ss_pred CCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEE
Confidence 43211000 0 0000 12689999999999988888899999999999999999998 776 99999
Q ss_pred EeccccC-hhHHhhhc-c--hh--hhhhhhhh---cCC----hhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHH
Q 004816 600 SLYGVAD-LSMLRAET-H--KF--ESRYIDNL---VGS----EKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARK 666 (729)
Q Consensus 600 ~~~~~~d-~~~~~~~~-~--~~--~~~~~~~~---~~~----~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~ 666 (729)
+.+|... ........ . .+ ...+.... ... ...+...++...+.++++|+|+++|++|.++|++.+.+
T Consensus 229 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~ 308 (346)
T 3fcy_A 229 SEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFA 308 (346)
T ss_dssp EESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHH
T ss_pred ECCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHH
Confidence 9999653 33222111 0 00 01111100 001 12233456667788999999999999999999999988
Q ss_pred HHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 667 IYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 667 ~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
+++.+.. +++++++|+++|.+. .+..+.+.+||++.
T Consensus 309 ~~~~~~~---~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 309 AYNNIQS---KKDIKVYPDYGHEPM-----RGFGDLAMQFMLEL 344 (346)
T ss_dssp HHTTCCS---SEEEEEETTCCSSCC-----TTHHHHHHHHHHTT
T ss_pred HHHhcCC---CcEEEEeCCCCCcCH-----HHHHHHHHHHHHHh
Confidence 8877754 789999999999876 35677888998763
No 43
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.87 E-value=6.1e-21 Score=187.30 Aligned_cols=206 Identities=17% Similarity=0.142 Sum_probs=160.1
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCC---CCccccchhhhHHHhhCCcEEEEecCCCCC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPT---SEARGILNLSIQYWTSRGWAFVDVNYGGST 533 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~---~~~~~~~~~~~~~la~~G~~v~~~d~rGs~ 533 (729)
..+.+.+.+. +| .+.++++.|.+.. .++.|+||++||++. ......+...++.|+++||.|+++|+||.+
T Consensus 9 ~~~~~~~~~~-~g-~~~~~~~~p~~~~-----~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g 81 (220)
T 2fuk_A 9 ESAALTLDGP-VG-PLDVAVDLPEPDV-----AVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVG 81 (220)
T ss_dssp SCEEEEEEET-TE-EEEEEEECCCTTS-----CCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTST
T ss_pred cceEEEEeCC-CC-eEEEEEEeCCCCC-----ccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 5678889887 77 8999999997610 145799999999642 222334567888999999999999999876
Q ss_pred CCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHhCCCcceEEEEeccccChhHHhhh
Q 004816 534 GYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVADLSMLRAE 613 (729)
Q Consensus 534 g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~~~~~a~v~~~~~~d~~~~~~~ 613 (729)
.....+ .......+|+.++++++.++. +.++++++|||+||.+++.++... +++++|+.+|..+...
T Consensus 82 ~s~~~~------~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~-~v~~~v~~~~~~~~~~---- 148 (220)
T 2fuk_A 82 TSAGSF------DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL-EPQVLISIAPPAGRWD---- 148 (220)
T ss_dssp TCCSCC------CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH-CCSEEEEESCCBTTBC----
T ss_pred CCCCCc------ccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc-cccEEEEecccccchh----
Confidence 544322 122345899999999999874 567999999999999999999833 8999999999866432
Q ss_pred cchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCc
Q 004816 614 THKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKA 693 (729)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~ 693 (729)
+ ..+. ...|+|+++|++|..+|++.+.++++.++ .+++++++++++|.+..
T Consensus 149 ------------------~------~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~~- 199 (220)
T 2fuk_A 149 ------------------F------SDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLE---QQPTLVRMPDTSHFFHR- 199 (220)
T ss_dssp ------------------C------TTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCS---SCCEEEEETTCCTTCTT-
T ss_pred ------------------h------hhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhC---cCCcEEEeCCCCceehh-
Confidence 0 0011 15789999999999999999988888774 35799999999998765
Q ss_pred ccHHHHHHHHHHHHHHHhC
Q 004816 694 ENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 694 ~~~~~~~~~~~~fl~~~l~ 712 (729)
...+..+.+.+|+.+++.
T Consensus 200 -~~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 200 -KLIDLRGALQHGVRRWLP 217 (220)
T ss_dssp -CHHHHHHHHHHHHGGGCS
T ss_pred -hHHHHHHHHHHHHHHHhh
Confidence 356788899999999986
No 44
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.87 E-value=2.6e-22 Score=207.92 Aligned_cols=206 Identities=18% Similarity=0.191 Sum_probs=155.2
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCC-ccccchhhhHHHhhCCcEEEEecCCCCCCCch
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWTSRGWAFVDVNYGGSTGYGR 537 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~ 537 (729)
..+.+. . ++. ...+|.|.+ ..++.|+||++|||++.. ....+...++.|+++||.|+.+||||+++...
T Consensus 59 ~~i~y~-~-~~~--~~~~~~p~~------~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~ 128 (303)
T 4e15_A 59 DHLRYG-E-GRQ--LVDVFYSEK------TTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTL 128 (303)
T ss_dssp EEEECS-S-TTC--EEEEEECTT------CCTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCH
T ss_pred eeeccC-C-CCc--EEEEEecCC------CCCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCCh
Confidence 344444 3 444 445666754 245689999999986533 33446667889999999999999998776432
Q ss_pred hHHHhhccCCCcccHHHHHHHHHHHHhC-CCCCCCcEEEEEcChHHHHHHHHHh-CC-------CcceEEEEeccccChh
Q 004816 538 EFRERLLGRWGIVDVNDCCSCATFLVGS-GKADEKRLCITGGSAGGYTTLAALA-FR-------DTFKAGASLYGVADLS 608 (729)
Q Consensus 538 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~-~~-------~~~~a~v~~~~~~d~~ 608 (729)
. ...+|+.++++|+.+. ...+.++|+|+|||+||++++.++. .. ++++++|+.+|+.++.
T Consensus 129 ~-----------~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~ 197 (303)
T 4e15_A 129 E-----------QLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLR 197 (303)
T ss_dssp H-----------HHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCH
T ss_pred h-----------HHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccH
Confidence 1 2368899999999773 2245789999999999999999887 32 3899999999999987
Q ss_pred HHhhhcchhhhhhhhhhc-CChhhhhhcCcc-cccCCC----CCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEE
Q 004816 609 MLRAETHKFESRYIDNLV-GSEKDYYEKSPI-NFVDKF----SCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVE 682 (729)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~sp~-~~~~~i----~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 682 (729)
.+...... +....+ ...+.+...+|+ ..+..+ ++|+|++||++|.++|+.++.+++++|+++|.++++++
T Consensus 198 ~~~~~~~~----~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~ 273 (303)
T 4e15_A 198 ELSNLESV----NPKNILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTL 273 (303)
T ss_dssp HHHTCTTT----SGGGTTCCCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred hhhccccc----chhhhhcCCHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEE
Confidence 65432111 112222 244566677887 566665 89999999999999999999999999999999999999
Q ss_pred ECCCCcc
Q 004816 683 YEGEQHG 689 (729)
Q Consensus 683 ~~~~gH~ 689 (729)
+|+++|.
T Consensus 274 ~~g~~H~ 280 (303)
T 4e15_A 274 FKGYDHF 280 (303)
T ss_dssp EEEEETT
T ss_pred eCCCCch
Confidence 9999994
No 45
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.87 E-value=2.8e-21 Score=202.04 Aligned_cols=237 Identities=17% Similarity=0.164 Sum_probs=167.8
Q ss_pred CcEEEEeeccCCCe-EEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCC-CccccchhhhHHHhh-CCcEEEEecCCCCC
Q 004816 457 LPELIEFPTEVPGQ-KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTS-RGWAFVDVNYGGST 533 (729)
Q Consensus 457 ~~~~~~~~~~~dG~-~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~la~-~G~~v~~~d~rGs~ 533 (729)
..+.+++.+. +|. .+.+++|.|.+ ..++.|+||++||+++. .....+...+..|++ .||.|+.+||||.+
T Consensus 50 ~~~~~~i~~~-~g~~~l~~~~~~P~~------~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~ 122 (323)
T 1lzl_A 50 SLRELSAPGL-DGDPEVKIRFVTPDN------TAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAP 122 (323)
T ss_dssp EEEEEEECCS-TTCCCEEEEEEEESS------CCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTT
T ss_pred eEEEEEecCC-CCCceeEEEEEecCC------CCCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCC
Confidence 4677888887 776 79999999865 13567999999998643 223345567777877 59999999999877
Q ss_pred CCchhHHHhhccCCCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHh-CCC----cceEEEEecccc
Q 004816 534 GYGREFRERLLGRWGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALA-FRD----TFKAGASLYGVA 605 (729)
Q Consensus 534 g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~-~~~----~~~a~v~~~~~~ 605 (729)
++... ...+|+.++++|+.+. ..+|+++|+|+|||+||++++.++. +++ .++++++.+|+.
T Consensus 123 ~~~~~-----------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~ 191 (323)
T 1lzl_A 123 ETTFP-----------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPEL 191 (323)
T ss_dssp TSCTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCC
T ss_pred CCCCC-----------chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCcc
Confidence 54211 2368899999999874 2467789999999999999999886 444 599999999988
Q ss_pred ChhHHhhhcch------h----hhhhhhhhcCC-------hhhhhhcCcccccCCCC--CCEEEEEeCCCCCCChHHHHH
Q 004816 606 DLSMLRAETHK------F----ESRYIDNLVGS-------EKDYYEKSPINFVDKFS--CPIILFQGLEDKVVPPDQARK 666 (729)
Q Consensus 606 d~~~~~~~~~~------~----~~~~~~~~~~~-------~~~~~~~sp~~~~~~i~--~PvL~i~G~~D~~vp~~~~~~ 666 (729)
+.......... + ...+.....+. .......+|+.. ..++ +|+|+++|++|.++ .++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~~~--~~~~~ 268 (323)
T 1lzl_A 192 DDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDPLR--DEGIE 268 (323)
T ss_dssp CTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCTTH--HHHHH
T ss_pred CCCcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccC-cccCCCChhheEECCcCCch--HHHHH
Confidence 75421110000 0 00011111111 111222344432 1222 79999999999986 68899
Q ss_pred HHHHHHhCCCCEEEEEECCCCcccCCc---ccHHHHHHHHHHHHHHHhCCC
Q 004816 667 IYKALKENGLPVALVEYEGEQHGFRKA---ENIKFTLEQQMVFFARVVGHF 714 (729)
Q Consensus 667 ~~~~l~~~g~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~fl~~~l~~~ 714 (729)
++++|+++|++++++++++++|++... +...++++.+.+||++++...
T Consensus 269 ~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 319 (323)
T 1lzl_A 269 YALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRSL 319 (323)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999987532 335688999999999999743
No 46
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.87 E-value=1.2e-20 Score=196.79 Aligned_cols=234 Identities=17% Similarity=0.177 Sum_probs=167.3
Q ss_pred CCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCC-CccccchhhhHHHhhC-CcEEEEecCCCCC
Q 004816 456 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSR-GWAFVDVNYGGST 533 (729)
Q Consensus 456 ~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~la~~-G~~v~~~d~rGs~ 533 (729)
...+.+++... +| .+.+++|.|.+ .++.|+||++|||++. .....+...+..|+.+ ||.|+.+||||.+
T Consensus 63 ~~~~~~~i~~~-~~-~i~~~iy~P~~-------~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~ 133 (323)
T 3ain_A 63 GKIEDITIPGS-ET-NIKARVYYPKT-------QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAP 133 (323)
T ss_dssp SEEEEEEEECS-SS-EEEEEEEECSS-------CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTT
T ss_pred cEEEEEEecCC-CC-eEEEEEEecCC-------CCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCC
Confidence 45677888876 66 89999999865 3457999999998642 3344567778888864 9999999999877
Q ss_pred CCchhHHHhhccCCCcccHHHHHHHHHHHHhCCC-C-CCCcEEEEEcChHHHHHHHHHh-CCCcc---eEEEEeccccCh
Q 004816 534 GYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK-A-DEKRLCITGGSAGGYTTLAALA-FRDTF---KAGASLYGVADL 607 (729)
Q Consensus 534 g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~-~-d~~ri~i~G~S~GG~~a~~~~~-~~~~~---~a~v~~~~~~d~ 607 (729)
.+.. ....+|+.++++|+.+... . |.+||+|+|+|+||.+|+.++. ++++. +++|+.+|+.+.
T Consensus 134 ~~~~-----------p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~ 202 (323)
T 3ain_A 134 ENKF-----------PAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSF 202 (323)
T ss_dssp TSCT-----------THHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSC
T ss_pred CCCC-----------cchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccC
Confidence 5321 1237899999999988631 1 7889999999999999999887 66555 899999998764
Q ss_pred hHHhhhc------chh----hhhhhhhhcCChh--hhhhcCcccc-cCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhC
Q 004816 608 SMLRAET------HKF----ESRYIDNLVGSEK--DYYEKSPINF-VDKFSCPIILFQGLEDKVVPPDQARKIYKALKEN 674 (729)
Q Consensus 608 ~~~~~~~------~~~----~~~~~~~~~~~~~--~~~~~sp~~~-~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~ 674 (729)
....... ..+ ...+......... .....+|+.. +..+ +|+|+++|++|.++ .++.+++++|+.+
T Consensus 203 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l-~P~lii~G~~D~l~--~~~~~~a~~l~~a 279 (323)
T 3ain_A 203 DLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILADLNDL-PPALIITAEHDPLR--DQGEAYANKLLQS 279 (323)
T ss_dssp CSCCHHHHHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTC-CCEEEEEETTCTTH--HHHHHHHHHHHHT
T ss_pred CCCCccHHHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccCcccCC-CHHHEEECCCCccH--HHHHHHHHHHHHc
Confidence 3211000 000 0011111111111 1112345443 2222 49999999999986 5789999999999
Q ss_pred CCCEEEEEECCCCcccCC----cccHHHHHHHHHHHHHHHhC
Q 004816 675 GLPVALVEYEGEQHGFRK----AENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 675 g~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~~fl~~~l~ 712 (729)
|++++++++++++|+|.. .+...++++.+.+||++++.
T Consensus 280 g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 280 GVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999754 24567889999999999875
No 47
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.87 E-value=9.4e-22 Score=204.88 Aligned_cols=234 Identities=17% Similarity=0.116 Sum_probs=167.2
Q ss_pred CCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCC-ccccchhhhHHHh-hCCcEEEEecCCCCC
Q 004816 456 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWT-SRGWAFVDVNYGGST 533 (729)
Q Consensus 456 ~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~la-~~G~~v~~~d~rGs~ 533 (729)
...+.+++.+. +|..+.+++|.|.+ ++.|+||++|||++.. ....+...+..|+ +.||.|+.+|||+++
T Consensus 58 ~~~~~~~i~~~-~G~~i~~~~~~P~~--------~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p 128 (317)
T 3qh4_A 58 VAVADDVVTGE-AGRPVPVRIYRAAP--------TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAP 128 (317)
T ss_dssp CEEEEEEEECT-TSCEEEEEEEECSC--------SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTT
T ss_pred ceEEEEEecCC-CCCeEEEEEEecCC--------CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCC
Confidence 35678888887 88899999999854 3579999999986432 2334566677777 459999999999877
Q ss_pred CCchhHHHhhccCCCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHh-CCC----cceEEEEecccc
Q 004816 534 GYGREFRERLLGRWGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALA-FRD----TFKAGASLYGVA 605 (729)
Q Consensus 534 g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~-~~~----~~~a~v~~~~~~ 605 (729)
++.. ....+|+.++++|+.++ ..+|++||+|+|+|+||++|+.++. +++ .+++.++.+|+.
T Consensus 129 ~~~~-----------p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~ 197 (317)
T 3qh4_A 129 EHPY-----------PAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVL 197 (317)
T ss_dssp TSCT-----------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCC
T ss_pred CCCC-----------chHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECcee
Confidence 5432 13378999999999886 4578899999999999999998886 333 599999999998
Q ss_pred ChhHHhhh-----cchhh----hhhhhhhcCChhhhhhcCcccccCCCC--CCEEEEEeCCCCCCChHHHHHHHHHHHhC
Q 004816 606 DLSMLRAE-----THKFE----SRYIDNLVGSEKDYYEKSPINFVDKFS--CPIILFQGLEDKVVPPDQARKIYKALKEN 674 (729)
Q Consensus 606 d~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~sp~~~~~~i~--~PvL~i~G~~D~~vp~~~~~~~~~~l~~~ 674 (729)
+....... ...+. ..+.....+........+|... ..++ +|+|++||++|.+++ ++.+++++|+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~l~~lpP~li~~G~~D~~~~--~~~~~a~~l~~~ 274 (317)
T 3qh4_A 198 DDRPTASRSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRR-GQLAGLPATLITCGEIDPFRD--EVLDYAQRLLGA 274 (317)
T ss_dssp CSSCCHHHHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGC-SCCTTCCCEEEEEEEESTTHH--HHHHHHHHHHHT
T ss_pred cCCCCcCHHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCcc-cccCCCCceeEEecCcCCCch--hHHHHHHHHHHc
Confidence 86411000 00000 0011111111111111233222 1222 599999999998864 789999999999
Q ss_pred CCCEEEEEECCCCcccC----CcccHHHHHHHHHHHHHHHhC
Q 004816 675 GLPVALVEYEGEQHGFR----KAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 675 g~~~~~~~~~~~gH~~~----~~~~~~~~~~~~~~fl~~~l~ 712 (729)
|+++++++|++++|+|. ..+...++++.+.+||+++|+
T Consensus 275 g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 275 GVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp TCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 99999999999999864 235567899999999999886
No 48
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.87 E-value=1.8e-21 Score=199.06 Aligned_cols=242 Identities=13% Similarity=0.160 Sum_probs=166.8
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcccc-chhhhHHHhhCCcEEEEecCCCCC---
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTSRGWAFVDVNYGGST--- 533 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~-~~~~~~~la~~G~~v~~~d~rGs~--- 533 (729)
.+.+.+.+..+|..+.+.++.|++.. +.+++|+||++||+++....+. .....+.++++||.|+.+|.++.+
T Consensus 15 ~~~~~~~s~~~g~~~~~~v~~P~~~~----~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~ 90 (280)
T 3ls2_A 15 HKQYTHSAVSTHCTMRFAVFLPPGAS----ESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNV 90 (280)
T ss_dssp EEEEEEEETTTTEEEEEEEEECTTCB----TTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTS
T ss_pred EEEEEEechhcCCceEEEEEcCCCCC----CCCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCccccccc
Confidence 45667766547889999999998732 2567899999999865443221 112456677789999999976422
Q ss_pred --------CCchhHHH-hhccCCC-cccHHH-H-HHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEE
Q 004816 534 --------GYGREFRE-RLLGRWG-IVDVND-C-CSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGAS 600 (729)
Q Consensus 534 --------g~g~~~~~-~~~~~~~-~~~~~D-~-~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~ 600 (729)
|.|..+.. .....+. .....+ + ..+++++.+...+ .+|++|+|||+||++|+.++. +|++|+++++
T Consensus 91 ~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~ 169 (280)
T 3ls2_A 91 PNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV-TSTKAISGHSMGGHGALMIALKNPQDYVSASA 169 (280)
T ss_dssp CCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEE
T ss_pred ccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCC-CCCeEEEEECHHHHHHHHHHHhCchhheEEEE
Confidence 11222111 1000110 011122 2 2334455444333 489999999999999999988 9999999999
Q ss_pred eccccChhHHhhhcchhhhhhhhhhcC-ChhhhhhcCcccccCCCC----CCEEEEEeCCCCCCChHH-HHHHHHHHHhC
Q 004816 601 LYGVADLSMLRAETHKFESRYIDNLVG-SEKDYYEKSPINFVDKFS----CPIILFQGLEDKVVPPDQ-ARKIYKALKEN 674 (729)
Q Consensus 601 ~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~sp~~~~~~i~----~PvL~i~G~~D~~vp~~~-~~~~~~~l~~~ 674 (729)
.+|+.+....... .......++ ....+...+|...+.+++ +|+|++||++|.+++.+. +.+++++|+++
T Consensus 170 ~s~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~ 244 (280)
T 3ls2_A 170 FSPIVNPINCPWG-----VKAFTGYLGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQK 244 (280)
T ss_dssp ESCCSCGGGSHHH-----HHHHHHHHCSCGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHHH
T ss_pred ecCccCcccCcch-----hhHHHhhcCchHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHHh
Confidence 9998876532111 111122222 345666777777776664 599999999999999854 88999999999
Q ss_pred CCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 675 GLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 675 g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
|++++++++|+++|.|. .+...+...++|+.++|+
T Consensus 245 g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 245 DYPLTLEMQTGYDHSYF---FISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp TCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEeCCCCCchh---hHHHHHHHHHHHHHHHhc
Confidence 99999999999999863 456778889999999885
No 49
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.87 E-value=2.6e-21 Score=204.85 Aligned_cols=236 Identities=14% Similarity=0.159 Sum_probs=161.6
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCC----------CCCCCCCCCEEEEEcCCCCCCccc---cchhhhHHHh-hCCcE
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIY----------QASPEEKPPLLVKSHGGPTSEARG---ILNLSIQYWT-SRGWA 523 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~----------~~~~~~~~P~vv~~hGg~~~~~~~---~~~~~~~~la-~~G~~ 523 (729)
.+.+.+.. +..+.+.+|.|++... .+...++.|+||++|||++..... .|...++.|+ ++||.
T Consensus 72 ~~dv~~~~---~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~ 148 (351)
T 2zsh_A 72 SFDVLIDR---RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCV 148 (351)
T ss_dssp EEEEEEET---TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSE
T ss_pred EEEEEecC---CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCE
Confidence 34455544 4456777888865210 000135679999999986543222 2666778888 78999
Q ss_pred EEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCC----CCCCC-cEEEEEcChHHHHHHHHHh-CCC---c
Q 004816 524 FVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG----KADEK-RLCITGGSAGGYTTLAALA-FRD---T 594 (729)
Q Consensus 524 v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-ri~i~G~S~GG~~a~~~~~-~~~---~ 594 (729)
|+.+||||++++... ..++|+.++++|+.++. .+|.+ ||+|+|||+||.+|+.++. +++ +
T Consensus 149 vv~~d~rg~~~~~~~-----------~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~ 217 (351)
T 2zsh_A 149 VVSVNYRRAPENPYP-----------CAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGID 217 (351)
T ss_dssp EEEECCCCTTTSCTT-----------HHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCC
T ss_pred EEEecCCCCCCCCCc-----------hhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCC
Confidence 999999997653211 34789999999998864 47889 9999999999999999987 777 8
Q ss_pred ceEEEEeccccChhHHhhhc-----ch-----hhhhhhhhhc--CChhhhhhcCcc----cccCCCCC-CEEEEEeCCCC
Q 004816 595 FKAGASLYGVADLSMLRAET-----HK-----FESRYIDNLV--GSEKDYYEKSPI----NFVDKFSC-PIILFQGLEDK 657 (729)
Q Consensus 595 ~~a~v~~~~~~d~~~~~~~~-----~~-----~~~~~~~~~~--~~~~~~~~~sp~----~~~~~i~~-PvL~i~G~~D~ 657 (729)
++++|+.+|+.+........ .. ....+..... +........+|+ ..+.++++ |+|+++|++|.
T Consensus 218 v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP~Lii~G~~D~ 297 (351)
T 2zsh_A 218 VLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDL 297 (351)
T ss_dssp CCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCEEEEEEETTST
T ss_pred eeEEEEECCccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCCEEEEEcCCCc
Confidence 99999999987643211000 00 0000111111 001111112222 23455565 99999999999
Q ss_pred CCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCC---cccHHHHHHHHHHHHHH
Q 004816 658 VVPPDQARKIYKALKENGLPVALVEYEGEQHGFRK---AENIKFTLEQQMVFFAR 709 (729)
Q Consensus 658 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~~fl~~ 709 (729)
+++ ++.+++++|++.|.+++++++++++|.+.. .+...++++.+.+||++
T Consensus 298 ~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 298 IRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp THH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred chH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 875 678899999999999999999999998754 35667888999999875
No 50
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.86 E-value=2.8e-21 Score=201.14 Aligned_cols=236 Identities=20% Similarity=0.201 Sum_probs=167.5
Q ss_pred CCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCC-CccccchhhhHHHhhC-CcEEEEecCCCC
Q 004816 455 FSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSR-GWAFVDVNYGGS 532 (729)
Q Consensus 455 ~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~la~~-G~~v~~~d~rGs 532 (729)
....+.+.+.+. +| .+.++++.|.+ .++.|+||++||+++. .....+...+..|+++ ||.|+.+||||.
T Consensus 48 ~~~~~~~~i~~~-~g-~~~~~~~~P~~-------~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~ 118 (313)
T 2wir_A 48 IHRVEDITIPGR-GG-PIRARVYRPRD-------GERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLA 118 (313)
T ss_dssp CSEEEEEEEEET-TE-EEEEEEEECSC-------CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHCCEEEEEECCCT
T ss_pred CceEEEEEeeCC-CC-cEEEEEEecCC-------CCCccEEEEECCCcccCCChHHHHHHHHHHHHHcCCEEEEeecCCC
Confidence 345678888886 65 99999999965 3457999999998632 3334566777888874 999999999987
Q ss_pred CCCchhHHHhhccCCCcccHHHHHHHHHHHHhCC---CCCCCcEEEEEcChHHHHHHHHHh-CCCc----ceEEEEeccc
Q 004816 533 TGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALA-FRDT----FKAGASLYGV 604 (729)
Q Consensus 533 ~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~-~~~~----~~a~v~~~~~ 604 (729)
+.+... ...+|+.++++|+.+.. .+|+++|+|+|+|+||.+++.++. ++++ ++++|+.+|+
T Consensus 119 g~~~~~-----------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~ 187 (313)
T 2wir_A 119 PEHKFP-----------AAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYPA 187 (313)
T ss_dssp TTSCTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCC
T ss_pred CCCCCC-----------chHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEEEEcCc
Confidence 754321 23688999999998762 367779999999999999999887 6665 9999999998
Q ss_pred cC-hhHH----hhh----cc----hhhhhhhhhhcCCh--hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHH
Q 004816 605 AD-LSML----RAE----TH----KFESRYIDNLVGSE--KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYK 669 (729)
Q Consensus 605 ~d-~~~~----~~~----~~----~~~~~~~~~~~~~~--~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~ 669 (729)
.+ .... ... .. .....+.....+.. ......+|+...-+..+|+|+++|++|.++ .++.++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~~--~~~~~~~~ 265 (313)
T 2wir_A 188 VNLTGSPTVSRVEYSGPEYVILTADLMAWFGRQYFSKPQDALSPYASPIFADLSNLPPALVITAEYDPLR--DEGELYAH 265 (313)
T ss_dssp CCCSSCCCHHHHHTCSGGGCSSCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCCTTCCCEEEEEEEECTTH--HHHHHHHH
T ss_pred cCCCCCCCcCHHHhcccCCCccCHHHHHHHHHHhCCCCCccCCCccCcCcccccCCCcceEEEcCcCcCh--HHHHHHHH
Confidence 87 2210 000 00 00011111111111 111123554222122359999999999987 57889999
Q ss_pred HHHhCCCCEEEEEECCCCcccCC----cccHHHHHHHHHHHHHHHhC
Q 004816 670 ALKENGLPVALVEYEGEQHGFRK----AENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 670 ~l~~~g~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~~fl~~~l~ 712 (729)
+|+.+|++++++++++++|+|.. .+...++++.+.+||+++++
T Consensus 266 ~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 266 LLKTRGVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp HHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHCCCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998753 24457888999999998764
No 51
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.86 E-value=6.2e-21 Score=219.70 Aligned_cols=245 Identities=17% Similarity=0.183 Sum_probs=175.1
Q ss_pred CCeE--EEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcc--------------------------------------
Q 004816 468 PGQK--AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR-------------------------------------- 507 (729)
Q Consensus 468 dG~~--l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~-------------------------------------- 507 (729)
||.+ |.++++.|++ .++.|+||..|+.......
T Consensus 182 DG~~d~L~a~l~~P~~-------~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~ 254 (763)
T 1lns_A 182 RGENDLIKIQIIRPKS-------TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKE 254 (763)
T ss_dssp SSSCCEEEEEEEECCC-------SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCC
T ss_pred CCCeeeEEEEEEecCC-------CCcccEEEecCCcCCCCcccccccccccccccccccCcccccccccccccccccccc
Confidence 8988 9999999976 4578999988775322100
Q ss_pred --------ccc-----hhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhC---------
Q 004816 508 --------GIL-----NLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGS--------- 565 (729)
Q Consensus 508 --------~~~-----~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--------- 565 (729)
..| ....++|+++||+|+.+|+||.|+++..+ ..++..+.+|+.++++||..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~-----~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~ 329 (763)
T 1lns_A 255 LPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQ-----TSGDYQQIYSMTAVIDWLNGRARAYTSRKK 329 (763)
T ss_dssp CCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCC-----CTTSHHHHHHHHHHHHHHTTSSCEESSTTC
T ss_pred ccccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcC-----CCCCHHHHHHHHHHHHHHhhcccccccccc
Confidence 011 12358899999999999999988765431 223335689999999999853
Q ss_pred -----CCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcc------hhh---------h---h-
Q 004816 566 -----GKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETH------KFE---------S---R- 620 (729)
Q Consensus 566 -----~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~------~~~---------~---~- 620 (729)
...+.+||+++|+||||++++.++. +|+.++++|+.+|+.++..+..... .+. . .
T Consensus 330 ~~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~ 409 (763)
T 1lns_A 330 THEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRN 409 (763)
T ss_dssp CCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGG
T ss_pred cccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhh
Confidence 1234579999999999999999988 8889999999999987654332110 000 0 0
Q ss_pred ------------h---hhhh---c--C---ChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCC
Q 004816 621 ------------Y---IDNL---V--G---SEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLP 677 (729)
Q Consensus 621 ------------~---~~~~---~--~---~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~ 677 (729)
+ ...+ . . ..+.|...++..++++|++|+|++||.+|..||+.++.+++++|+. +.+
T Consensus 410 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~-~~~ 488 (763)
T 1lns_A 410 LDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPE-GHA 488 (763)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCT-TCC
T ss_pred cCcchhhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhcc-CCC
Confidence 0 0000 0 0 0123445678888999999999999999999999999999999987 667
Q ss_pred EEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhCCCCCCCCCCceecc
Q 004816 678 VALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVGHFDVADEIIPIKID 726 (729)
Q Consensus 678 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~~~~~~~~~ 726 (729)
.++++ ++++|..........+.+.+.+||+++|++.++....|++.+.
T Consensus 489 ~~l~i-~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lkg~~ng~~~P~v~~~ 536 (763)
T 1lns_A 489 KHAFL-HRGAHIYMNSWQSIDFSETINAYFVAKLLDRDLNLNLPPVILQ 536 (763)
T ss_dssp EEEEE-ESCSSCCCTTBSSCCHHHHHHHHHHHHHTTCCCCCCCCSEEEE
T ss_pred eEEEE-eCCcccCccccchHHHHHHHHHHHHHHhcCCCCCCCCCcEEEE
Confidence 76655 5678986432222346788999999999976544466777664
No 52
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.86 E-value=5.5e-20 Score=186.27 Aligned_cols=226 Identities=13% Similarity=0.161 Sum_probs=158.6
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCc-cccc-hhhhHHHhhCCcEEEEecCCCCCCCc
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA-RGIL-NLSIQYWTSRGWAFVDVNYGGSTGYG 536 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~-~~~~-~~~~~~la~~G~~v~~~d~rGs~g~g 536 (729)
....+... +|..+.+.++.|.+ .++.|+||++||+++... ...+ ....+.+++. |.|+++|+||++...
T Consensus 4 ~~~~~~~~-dg~~l~~~~~~p~~-------~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~ 74 (275)
T 3h04_A 4 IKYKVITK-DAFALPYTIIKAKN-------QPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVS 74 (275)
T ss_dssp EEEEEECT-TSCEEEEEEECCSS-------SSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSC
T ss_pred eEEEEecC-CcEEEEEEEEccCC-------CCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCccc
Confidence 45667776 99999999999865 346799999999863222 2223 3667777777 999999999876432
Q ss_pred hhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHhCCCcceEEEEeccccChhHHh-hhcc
Q 004816 537 REFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVADLSMLR-AETH 615 (729)
Q Consensus 537 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~~~~~a~v~~~~~~d~~~~~-~~~~ 615 (729)
.. ...+|+.++++++.+. ++.++++|+|||+||++++.++.. ++++++|+.+|..++.... ....
T Consensus 75 ~~-----------~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~-~~v~~~v~~~~~~~~~~~~~~~~~ 140 (275)
T 3h04_A 75 LD-----------CIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD-RDIDGVIDFYGYSRINTEPFKTTN 140 (275)
T ss_dssp HH-----------HHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH-SCCSEEEEESCCSCSCSHHHHSCC
T ss_pred cc-----------hhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc-CCccEEEecccccccccccccccc
Confidence 21 2378999999999987 567899999999999999999888 8899999999988652211 1000
Q ss_pred hh--------hhhhhhhhcC-------------------------------ChhhhhhcC-cccccCCCCCCEEEEEeCC
Q 004816 616 KF--------ESRYIDNLVG-------------------------------SEKDYYEKS-PINFVDKFSCPIILFQGLE 655 (729)
Q Consensus 616 ~~--------~~~~~~~~~~-------------------------------~~~~~~~~s-p~~~~~~i~~PvL~i~G~~ 655 (729)
.. .......+.. ....+.... ....+.+++ |+|+++|++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~ 219 (275)
T 3h04_A 141 SYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNG 219 (275)
T ss_dssp HHHHHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETT
T ss_pred chhhcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCC
Confidence 00 0000000000 000000000 111236667 999999999
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccH--HHHHHHHHHHHHHHhC
Q 004816 656 DKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENI--KFTLEQQMVFFARVVG 712 (729)
Q Consensus 656 D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~--~~~~~~~~~fl~~~l~ 712 (729)
|.++|++++.++++.+. ..+++++++++|.+...... .+.++.+.+|+++++.
T Consensus 220 D~~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 220 DYDVPVEESEHIMNHVP----HSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp CSSSCTHHHHHHHTTCS----SEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCChHHHHHHHHhcC----CceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 99999999888876554 56899999999997655443 7889999999999874
No 53
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.86 E-value=3.3e-21 Score=196.76 Aligned_cols=242 Identities=14% Similarity=0.157 Sum_probs=167.2
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccch-hhhHHHhhCCcEEEEecCCCCCCCc
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGSTGYG 536 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~-~~~~~la~~G~~v~~~d~rGs~g~g 536 (729)
.+.+++.+...|..+.+.++.|++.. .++.|+||++||+++....+... ...+.+.+.||.|+.+|+||.+...
T Consensus 15 ~~~~~~~s~~~g~~~~~~v~~P~~~~-----~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~ 89 (278)
T 3e4d_A 15 QGVFSHQSETLKSEMTFAVYVPPKAI-----HEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDV 89 (278)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGG-----TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTS
T ss_pred EEEEEEeccccCCcceEEEEcCCCCC-----CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCccc
Confidence 35566665547889999999997621 45789999999986544322111 1445556679999999998765432
Q ss_pred hh----HH---------HhhccCC-CcccHHHH--HHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEE
Q 004816 537 RE----FR---------ERLLGRW-GIVDVNDC--CSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGA 599 (729)
Q Consensus 537 ~~----~~---------~~~~~~~-~~~~~~D~--~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v 599 (729)
.. |. ......+ ......+. ..+++++.+...+|+++++|+|||+||++|+.++. +|++|++++
T Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 169 (278)
T 3e4d_A 90 PDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCS 169 (278)
T ss_dssp CCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEE
T ss_pred ccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEE
Confidence 11 10 0000000 01112222 24666776665677799999999999999999988 999999999
Q ss_pred EeccccChhHHhhhcchhhhhhhhhhcC-ChhhhhhcCcccccCCCC--CCEEEEEeCCCCCCChHH-HHHHHHHHHhCC
Q 004816 600 SLYGVADLSMLRAETHKFESRYIDNLVG-SEKDYYEKSPINFVDKFS--CPIILFQGLEDKVVPPDQ-ARKIYKALKENG 675 (729)
Q Consensus 600 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~sp~~~~~~i~--~PvL~i~G~~D~~vp~~~-~~~~~~~l~~~g 675 (729)
+.+|+.+....... ...+...++ ....+...+|...+.+++ +|+|++||++|.++|... +.++++.|++.|
T Consensus 170 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g 244 (278)
T 3e4d_A 170 AFAPIVAPSSADWS-----EPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTD 244 (278)
T ss_dssp EESCCSCGGGCTTT-----HHHHHHHHCSCGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSS
T ss_pred EeCCcccccCCccc-----hhhHHHhcCCcHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHHcC
Confidence 99998876432111 111122222 345566677776666554 599999999999987532 789999999999
Q ss_pred CCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 676 LPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 676 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
.+++++++|+++|.+. .+...++.+++|+.++|+
T Consensus 245 ~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 245 IGLTLRMHDRYDHSYY---FISTFMDDHLKWHAERLG 278 (278)
T ss_dssp CEEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred CCceEEEeCCCCcCHH---HHHHHHHHHHHHHHHhcC
Confidence 9999999999999863 455778888999998874
No 54
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=4.9e-20 Score=199.57 Aligned_cols=245 Identities=14% Similarity=0.145 Sum_probs=183.9
Q ss_pred CCEEEEEECCC-----CcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEc
Q 004816 154 GDTVIFSNYKD-----QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (729)
Q Consensus 154 ~~~i~~~~~~~-----~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl 228 (729)
+++++|..... +.|+++|+++ +..+.++.. ...+..++|||||++|+++..+.. ...|+++|+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g--~~~~~l~~~----~~~v~~~~~Spdg~~la~~s~~~~------~~~i~~~d~ 210 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG--YNQFVVHRS----PQPLMSPAWSPDGSKLAYVTFESG------RSALVIQTL 210 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS--CSCEEEEEE----SSCEEEEEECTTSSEEEEEECTTS------SCEEEEEET
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC--CCCEEEeCC----CCcceeeEEcCCCCEEEEEEecCC------CcEEEEEEC
Confidence 55777776542 5899999987 778888765 345688999999999999986542 257999999
Q ss_pred CCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCC
Q 004816 229 NGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK 308 (729)
Q Consensus 229 ~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspD 308 (729)
++++.++++........++|||||++|+|+.... ...+||++|+. +++. . .+.... ..+..+.|+||
T Consensus 211 ~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~-----g~~~i~~~d~~-~~~~--~-~l~~~~----~~~~~~~~spd 277 (415)
T 2hqs_A 211 ANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT-----GSLNLYVMDLA-SGQI--R-QVTDGR----SNNTEPTWFPD 277 (415)
T ss_dssp TTCCEEEEECCSSCEEEEEECTTSSEEEEEECTT-----SSCEEEEEETT-TCCE--E-ECCCCS----SCEEEEEECTT
T ss_pred CCCcEEEeecCCCcccCEEEcCCCCEEEEEEecC-----CCceEEEEECC-CCCE--E-eCcCCC----CcccceEECCC
Confidence 9999888887666778899999999999887432 24579999998 6664 2 333333 44567899999
Q ss_pred Cc-EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCC
Q 004816 309 GE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG 387 (729)
Q Consensus 309 G~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~ 387 (729)
|+ |++.+.. .+..+||++|+.+++.+.++........+.|++ +++.|++.+..++...|+++++++
T Consensus 278 g~~l~~~s~~-~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~sp------------dG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 278 SQNLAFTSDQ-AGRPQVYKVNINGGAPQRITWEGSQNQDADVSS------------DGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp SSEEEEEECT-TSSCEEEEEETTSSCCEECCCSSSEEEEEEECT------------TSSEEEEEEECSSCEEEEEEETTT
T ss_pred CCEEEEEECC-CCCcEEEEEECCCCCEEEEecCCCcccCeEECC------------CCCEEEEEECcCCceEEEEEECCC
Confidence 99 8888876 577899999999998777764443444456665 888898888877888999999999
Q ss_pred CceEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcceeee
Q 004816 388 HSLSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 388 g~~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt 437 (729)
++.+.++... .+..+ ..++++.+++.+.......||+++++++..++|+
T Consensus 345 ~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 345 GGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp CCEEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred CCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 9998887664 45554 4444445555555555567999999887765554
No 55
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.86 E-value=1.5e-20 Score=195.46 Aligned_cols=235 Identities=17% Similarity=0.215 Sum_probs=166.3
Q ss_pred CCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCC-CccccchhhhHHHhhC-CcEEEEecCCCC
Q 004816 455 FSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSR-GWAFVDVNYGGS 532 (729)
Q Consensus 455 ~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~la~~-G~~v~~~d~rGs 532 (729)
....+.++++.. +| .+.++++.|.+ ..+.|+||++||+++. .....+...+..|+.+ ||.|+.+||||.
T Consensus 45 ~~~~~~~~i~~~-~g-~i~~~~~~p~~-------~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~ 115 (311)
T 2c7b_A 45 IAETRDVHIPVS-GG-SIRARVYFPKK-------AAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLA 115 (311)
T ss_dssp CSEEEEEEEEET-TE-EEEEEEEESSS-------CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCT
T ss_pred cceEEEEEecCC-CC-cEEEEEEecCC-------CCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCC
Confidence 345678888886 55 89999999865 3346899999998632 2234566677888876 999999999987
Q ss_pred CCCchhHHHhhccCCCcccHHHHHHHHHHHHhCC---CCCCCcEEEEEcChHHHHHHHHHh-CCC----cceEEEEeccc
Q 004816 533 TGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALA-FRD----TFKAGASLYGV 604 (729)
Q Consensus 533 ~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~-~~~----~~~a~v~~~~~ 604 (729)
+++... ...+|+.++++|+.+.. .+|+++++|+|||+||++++.++. +++ +++++|+.+|.
T Consensus 116 g~~~~~-----------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~ 184 (311)
T 2c7b_A 116 PEYKFP-----------TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPV 184 (311)
T ss_dssp TTSCTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCC
T ss_pred CCCCCC-----------ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCc
Confidence 764321 23688999999998762 457789999999999999999886 544 59999999998
Q ss_pred cCh----hHHhhhcch-----h----hhhhhhhhcCCh--hhhhhcCcccc-cCCCCCCEEEEEeCCCCCCChHHHHHHH
Q 004816 605 ADL----SMLRAETHK-----F----ESRYIDNLVGSE--KDYYEKSPINF-VDKFSCPIILFQGLEDKVVPPDQARKIY 668 (729)
Q Consensus 605 ~d~----~~~~~~~~~-----~----~~~~~~~~~~~~--~~~~~~sp~~~-~~~i~~PvL~i~G~~D~~vp~~~~~~~~ 668 (729)
.++ ......... + ...+.....+.. ......+|+.. +..+ +|+|+++|++|.+++ ++..++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~~--~~~~~~ 261 (311)
T 2c7b_A 185 VNMTGVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGL-PPALVVTAEYDPLRD--EGELYA 261 (311)
T ss_dssp CCCSSCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTC-CCEEEEEETTCTTHH--HHHHHH
T ss_pred cCCccccccCCccHHHhccCCCCHHHHHHHHHHhCCCCccccCcccCcccccccCC-CcceEEEcCCCCchH--HHHHHH
Confidence 873 111100000 0 001111111111 11112344432 2333 499999999999874 677888
Q ss_pred HHHHhCCCCEEEEEECCCCcccCC----cccHHHHHHHHHHHHHHHhC
Q 004816 669 KALKENGLPVALVEYEGEQHGFRK----AENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 669 ~~l~~~g~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~~fl~~~l~ 712 (729)
+.++..|.+++++++++++|++.. .+...++.+.+.+||+++++
T Consensus 262 ~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 262 YKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp HHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999998752 34557889999999999886
No 56
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.86 E-value=2.6e-20 Score=201.03 Aligned_cols=235 Identities=17% Similarity=0.197 Sum_probs=168.4
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccch-hhhHHHhhCCcEEEEecCCCCCCC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGSTGY 535 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~-~~~~~la~~G~~v~~~d~rGs~g~ 535 (729)
..+.+.++. +|..+.++++.+. .++.|+||++||..... ..+. .....+.++||.|+++|+||.|..
T Consensus 134 ~~~~~~i~~--~~~~l~~~~~~~~--------~~~~p~vv~~HG~~~~~--~~~~~~~~~~~~~~g~~vi~~D~~G~G~s 201 (405)
T 3fnb_A 134 PLKSIEVPF--EGELLPGYAIISE--------DKAQDTLIVVGGGDTSR--EDLFYMLGYSGWEHDYNVLMVDLPGQGKN 201 (405)
T ss_dssp CCEEEEEEE--TTEEEEEEEECCS--------SSCCCEEEEECCSSCCH--HHHHHHTHHHHHHTTCEEEEECCTTSTTG
T ss_pred CcEEEEEeE--CCeEEEEEEEcCC--------CCCCCEEEEECCCCCCH--HHHHHHHHHHHHhCCcEEEEEcCCCCcCC
Confidence 457788887 6889999988542 34459999999974332 2222 233466789999999999987654
Q ss_pred chhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhc
Q 004816 536 GREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAET 614 (729)
Q Consensus 536 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~ 614 (729)
... .........+|+.+++++|.... ++|+|+|||+||++++.++. +| +++++|+.+|+.++.......
T Consensus 202 ~~~-----~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~ 271 (405)
T 3fnb_A 202 PNQ-----GLHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRIS 271 (405)
T ss_dssp GGG-----TCCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHH
T ss_pred CCC-----CCCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHh
Confidence 211 11222234789999999987764 78999999999999999998 66 999999999999876543211
Q ss_pred chhh--------------------------hhhhhhhcC-Ch----hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHH
Q 004816 615 HKFE--------------------------SRYIDNLVG-SE----KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQ 663 (729)
Q Consensus 615 ~~~~--------------------------~~~~~~~~~-~~----~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~ 663 (729)
.... ..+...... .. ..+....+...+.++++|+|+++|++|.++|+++
T Consensus 272 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~ 351 (405)
T 3fnb_A 272 FSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQ 351 (405)
T ss_dssp CC------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHH
T ss_pred hhhhhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHH
Confidence 0000 000000000 10 1222334444478899999999999999999999
Q ss_pred HHHHHHHHHhCCCCEEEEEECCCCcc--cCCcccHHHHHHHHHHHHHHHhCC
Q 004816 664 ARKIYKALKENGLPVALVEYEGEQHG--FRKAENIKFTLEQQMVFFARVVGH 713 (729)
Q Consensus 664 ~~~~~~~l~~~g~~~~~~~~~~~gH~--~~~~~~~~~~~~~~~~fl~~~l~~ 713 (729)
+.++++.++..+.++++++++++.|+ ....++.....+.+.+||+++++.
T Consensus 352 ~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 352 SQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999766554 234577888999999999999974
No 57
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.86 E-value=3.3e-21 Score=202.97 Aligned_cols=237 Identities=16% Similarity=0.124 Sum_probs=158.2
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccc---cchhhhHHHh-hCCcEEEEecCCCC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG---ILNLSIQYWT-SRGWAFVDVNYGGS 532 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~---~~~~~~~~la-~~G~~v~~~d~rGs 532 (729)
..+.+.+.. +..+.+.+|.|++.. .+.++.|+||++|||++..... .|...+..|+ ++||.|+.+||||.
T Consensus 54 ~~~~v~~~~---~~~~~~~~~~P~~~~---~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~ 127 (338)
T 2o7r_A 54 LTKDLALNP---LHNTFVRLFLPRHAL---YNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLA 127 (338)
T ss_dssp EEEEEEEET---TTTEEEEEEEEGGGG---GSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCT
T ss_pred EEEEEEecC---CCCeEEEEEeCCCCC---cCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCC
Confidence 345566654 344666677776520 0245779999999986543322 2566778887 78999999999987
Q ss_pred CCCchhHHHhhccCCCcccHHHHHHHHHHHHhCC------CCCCCcEEEEEcChHHHHHHHHHh-CCC--------cceE
Q 004816 533 TGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG------KADEKRLCITGGSAGGYTTLAALA-FRD--------TFKA 597 (729)
Q Consensus 533 ~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~------~~d~~ri~i~G~S~GG~~a~~~~~-~~~--------~~~a 597 (729)
+++.. ...++|+.++++|+.++. .+|.+|++|+|||+||++++.++. +++ ++++
T Consensus 128 ~~~~~-----------~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~ 196 (338)
T 2o7r_A 128 PEHRL-----------PAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKG 196 (338)
T ss_dssp TTTCT-----------THHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEE
T ss_pred CCCCC-----------chHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeE
Confidence 65321 134789999999998862 256689999999999999999987 777 8999
Q ss_pred EEEeccccChhHHhhhc-----c-----hhhhhhhhhhc--CChhhhhhcCcc---------cccCCCCCCEEEEEeCCC
Q 004816 598 GASLYGVADLSMLRAET-----H-----KFESRYIDNLV--GSEKDYYEKSPI---------NFVDKFSCPIILFQGLED 656 (729)
Q Consensus 598 ~v~~~~~~d~~~~~~~~-----~-----~~~~~~~~~~~--~~~~~~~~~sp~---------~~~~~i~~PvL~i~G~~D 656 (729)
+|+.+|+.+........ . .....+..... +........+|+ ..+..+.+|+|+++|++|
T Consensus 197 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D 276 (338)
T 2o7r_A 197 LVLDEPGFGGSKRTGSELRLANDSRLPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGD 276 (338)
T ss_dssp EEEESCCCCCSSCCHHHHHTTTCSSSCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTS
T ss_pred EEEECCccCCCcCChhhhccCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCC
Confidence 99999987643211100 0 00000011000 000000111222 122335569999999999
Q ss_pred CCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccC--CcccHHHHHHHHHHHHHHHhC
Q 004816 657 KVVPPDQARKIYKALKENGLPVALVEYEGEQHGFR--KAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 657 ~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~--~~~~~~~~~~~~~~fl~~~l~ 712 (729)
.+++ ++.+++++|++.+.+++++++++++|.+. .++...+.++.+.+|+.++++
T Consensus 277 ~~~~--~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~ 332 (338)
T 2o7r_A 277 PMID--RQMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCT 332 (338)
T ss_dssp TTHH--HHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC----
T ss_pred cchH--HHHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhcc
Confidence 9876 56889999999999999999999999874 334557889999999998875
No 58
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=5.6e-20 Score=214.57 Aligned_cols=312 Identities=8% Similarity=0.022 Sum_probs=208.3
Q ss_pred CceEEcC-CCcEEEEeecCC---CCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcE
Q 004816 92 GGTAVDG-HGRLIWLESRPT---EAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (729)
Q Consensus 92 ~~~~~~p-g~~~~~~~~~~~---~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 167 (729)
.++.||| |+.++|...... ......+|.++..+ |+.+.|+..+... ....|+++++.|+|.. +++|
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~-~~~~~l~~~~~~~-------~~~~~SPdG~~la~~~--~~~i 134 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK-RQLITEERIPNNT-------QWVTWSPVGHKLAYVW--NNDI 134 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT-TEECCSSCCCTTE-------EEEEECSSTTCEEEEE--TTEE
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCC-CcEEEcccCCCcc-------eeeEECCCCCEEEEEE--CCeE
Confidence 3589999 898888764211 11224566666663 3555565432111 1345777888999995 4679
Q ss_pred EEEeCCCCCCCCeecCCCCCCCc---------------eeeecceecCCCCEEEEEEeccCCC-----------------
Q 004816 168 YKHSIDSKDSSPLPITPDYGEPL---------------VSYADGIFDPRFNRYVTVREDRRQD----------------- 215 (729)
Q Consensus 168 ~~~d~~~~~~~~~~lt~~~~~~~---------------~~~~~~~~SPdG~~l~~~~~~~~~~----------------- 215 (729)
|++++.+ ++.++||....... .+...+.|||||++|+|.+.+...-
T Consensus 135 ~~~~~~~--~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~ 212 (740)
T 4a5s_A 135 YVKIEPN--LPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPK 212 (740)
T ss_dssp EEESSTT--SCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCE
T ss_pred EEEECCC--CceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCc
Confidence 9999998 88899986521100 0112478999999999987554311
Q ss_pred ----------CCCcceEEEEEEcCC---C---ceEEeee------CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEE
Q 004816 216 ----------ALNSTTEIVAIALNG---Q---NIQVLVS------GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELW 273 (729)
Q Consensus 216 ----------~~~~~~~l~~~dl~~---g---~~~~lt~------~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~ 273 (729)
.......|+++|+++ + +.++|.. .......++|||||+.+++...... +..+|+
T Consensus 213 ~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~----~~~~i~ 288 (740)
T 4a5s_A 213 TVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ----NYSVMD 288 (740)
T ss_dssp EEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST----TEEEEE
T ss_pred ceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC----CEEEEE
Confidence 011234799999999 8 6677764 3345678999999998877764332 346799
Q ss_pred EEEecCCCC----eee-eEEe-cCCCCCcccc--ccCceeCCCCc-EE-EEEecCCCceEEEEEEcCCCeEEEeeccCcc
Q 004816 274 VGYISENGD----VYK-RVCV-AGFDPTIVES--PTEPKWSSKGE-LF-FVTDRKNGFWNLHKWIESNNEVLAIYSLDAE 343 (729)
Q Consensus 274 ~~d~~~~g~----~~~-~~~~-~~~~~~~~~~--~~~~~wspDG~-l~-~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~ 343 (729)
++|++ +|+ ... ..++ ...+ .|... ...|.|||||+ ++ +.+.+ .|..+||++|+++++.++|+....+
T Consensus 289 ~~d~~-tg~~~~~~~~~~~l~~~~~~-~~v~~~~~~~p~fspDG~~l~~~~s~~-~G~~~l~~~~~~~~~~~~lT~g~~~ 365 (740)
T 4a5s_A 289 ICDYD-ESSGRWNCLVARQHIEMSTT-GWVGRFRPSEPHFTLDGNSFYKIISNE-EGYRHICYFQIDKKDCTFITKGTWE 365 (740)
T ss_dssp EEEEE-TTTTEEEECGGGCEEEECSS-SCSSSSSCCCCEECTTSSEEEEEEECT-TSCEEEEEEETTCSSCEESCCSSSC
T ss_pred EEECC-CCccccceeEEEEeeeccCC-ceEccCcCCCceEcCCCCEEEEEEEcC-CCceEEEEEECCCCceEecccCCEE
Confidence 99998 676 211 1222 2222 23221 34799999999 77 66666 7899999999999999999966544
Q ss_pred ccCCcccccCcceeeeeecCCCCEEEEEEEE----CCeEEEEEEECCCCceE-eeccCC----cceEEe--eeeCCEEEE
Q 004816 344 FSRPLWVFGINSYEIIQSHGEKNLIACSYRQ----NGRSYLGILDDFGHSLS-LLDIPF----TDIDNI--TLGNDCLFV 412 (729)
Q Consensus 344 ~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~----~g~~~ly~~d~~~g~~~-~lt~~~----~~v~~~--~~~~~~~~~ 412 (729)
+..+.+ . +++.|||++.+ .+..+||+++++++..+ +|+... ..+... +++++.+++
T Consensus 366 v~~~~~-~------------d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~ 432 (740)
T 4a5s_A 366 VIGIEA-L------------TSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQL 432 (740)
T ss_dssp EEEEEE-E------------CSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEE
T ss_pred EEEEEE-E------------eCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEE
Confidence 432221 1 67889999977 57789999999987765 777431 233333 566777777
Q ss_pred EEeCCCCCceEEEEEcCCCcceee
Q 004816 413 EGASGVEPSSVAKVTLDDHKLKAV 436 (729)
Q Consensus 413 ~~~~~~~~~~ly~~d~~~~~~~~l 436 (729)
..++++ ++.+++++.++++..++
T Consensus 433 ~~s~~~-~p~~~l~~~~~~~~~~~ 455 (740)
T 4a5s_A 433 RCSGPG-LPLYTLHSSVNDKGLRV 455 (740)
T ss_dssp EECSBS-SCEEEEEETTTTEEEEE
T ss_pred EeCCCC-CCEEEEEECCCCcEEEE
Confidence 777766 88899999887765444
No 59
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.85 E-value=1.1e-20 Score=192.48 Aligned_cols=203 Identities=17% Similarity=0.130 Sum_probs=148.5
Q ss_pred CCCCCEEEEEcCCCCCC---ccccchhhhHHH----hhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHH
Q 004816 489 EEKPPLLVKSHGGPTSE---ARGILNLSIQYW----TSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATF 561 (729)
Q Consensus 489 ~~~~P~vv~~hGg~~~~---~~~~~~~~~~~l----a~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~ 561 (729)
.++.|+||++||+++.. ....|...++.| ++.||.|+++|||+++.... ...++|+.+++++
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~-----------~~~~~d~~~~~~~ 106 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN-----------PRNLYDAVSNITR 106 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT-----------THHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCC-----------CcHHHHHHHHHHH
Confidence 35679999999986542 344567777877 67899999999997654221 1237899999999
Q ss_pred HHhCCCCCCCcEEEEEcChHHHHHHHHHh-C-----------------CCcceEEEEeccccChhHHhhhcchhhhhhhh
Q 004816 562 LVGSGKADEKRLCITGGSAGGYTTLAALA-F-----------------RDTFKAGASLYGVADLSMLRAETHKFESRYID 623 (729)
Q Consensus 562 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~-----------------~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~ 623 (729)
+.++ ++.++++|+|||+||++++.++. + +++++++|+.+|+.++.........+. .+..
T Consensus 107 l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~-~~~~ 183 (273)
T 1vkh_A 107 LVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYD-CFTR 183 (273)
T ss_dssp HHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGH-HHHH
T ss_pred HHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccHH-HHHH
Confidence 9887 46789999999999999999998 4 889999999999988765543322211 1111
Q ss_pred hhc-CChhhh----hhcCccc--ccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccH
Q 004816 624 NLV-GSEKDY----YEKSPIN--FVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENI 696 (729)
Q Consensus 624 ~~~-~~~~~~----~~~sp~~--~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~ 696 (729)
..+ .....+ ...++.. ....+++|+|+++|++|.++|++++.++++.++..|.+++++++++++|.+....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-- 261 (273)
T 1vkh_A 184 LAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-- 261 (273)
T ss_dssp HHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC--
T ss_pred HHhcccccchhhcccccChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccccC--
Confidence 111 111111 1122211 1223679999999999999999999999999999999999999999999865433
Q ss_pred HHHHHHHHHHH
Q 004816 697 KFTLEQQMVFF 707 (729)
Q Consensus 697 ~~~~~~~~~fl 707 (729)
.+..+.+.+||
T Consensus 262 ~~~~~~i~~fl 272 (273)
T 1vkh_A 262 GKVAKYIFDNI 272 (273)
T ss_dssp HHHHHHHHHTC
T ss_pred hHHHHHHHHHc
Confidence 66777777765
No 60
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.85 E-value=2.9e-21 Score=197.79 Aligned_cols=241 Identities=14% Similarity=0.176 Sum_probs=163.2
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcccc-chhhhHHHhhCCcEEEEecC--CCCC-
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTSRGWAFVDVNY--GGST- 533 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~-~~~~~~~la~~G~~v~~~d~--rGs~- 533 (729)
.+.+++.+...|..+.+.++.|++.. .+++|+||++||+++....+. .....+.++++||.|+.+|. ||.+
T Consensus 22 ~~~~~~~s~~~~~~~~~~v~~P~~~~-----~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~ 96 (283)
T 4b6g_A 22 QQVWAHHAQTLQCEMKFAVYLPNNPE-----NRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQV 96 (283)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCTT-----CCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTS
T ss_pred EEEEEEechhhCCceEEEEEeCCCCC-----CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccc
Confidence 35566666557889999999998732 467899999999865543221 12345667788999999995 4433
Q ss_pred --------CCchhHH-HhhccCCC-cccHHHH--HHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEE
Q 004816 534 --------GYGREFR-ERLLGRWG-IVDVNDC--CSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGAS 600 (729)
Q Consensus 534 --------g~g~~~~-~~~~~~~~-~~~~~D~--~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~ 600 (729)
|.|..+. ......+. .....+. ..++.++.+... +.+|++|+|||+||++|+.++. +|++|+++++
T Consensus 97 ~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~ 175 (283)
T 4b6g_A 97 PNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFP-TNGKRSIMGHSMGGHGALVLALRNQERYQSVSA 175 (283)
T ss_dssp CCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSC-EEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEE
T ss_pred cccccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhCC-CCCCeEEEEEChhHHHHHHHHHhCCccceeEEE
Confidence 2222211 11111111 0111221 233444444322 4689999999999999999988 8999999999
Q ss_pred eccccChhHHhhhcchhhhhhhhhhcC-ChhhhhhcCcccccCCCC--CCEEEEEeCCCCCCCh-HHHHHHHHHHHhCCC
Q 004816 601 LYGVADLSMLRAETHKFESRYIDNLVG-SEKDYYEKSPINFVDKFS--CPIILFQGLEDKVVPP-DQARKIYKALKENGL 676 (729)
Q Consensus 601 ~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~sp~~~~~~i~--~PvL~i~G~~D~~vp~-~~~~~~~~~l~~~g~ 676 (729)
.+|+.+...... ....+...++ ....+...+|...+++++ +|+|++||+.|.+++. .++.+++++|+++|+
T Consensus 176 ~s~~~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~ 250 (283)
T 4b6g_A 176 FSPILSPSLVPW-----GEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQ 250 (283)
T ss_dssp ESCCCCGGGSHH-----HHHHHHHHHCSCGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTC
T ss_pred ECCccccccCcc-----hhhhHHhhcCCchHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHcCC
Confidence 999887643211 1111222222 345566677766665554 5999999999999876 238999999999999
Q ss_pred CEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 677 PVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 677 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
+++++++|+++|.|. .+...+...++|+.++|+
T Consensus 251 ~~~~~~~~g~~H~~~---~~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 251 PVDVRFHKGYDHSYY---FIASFIGEHIAYHAAFLK 283 (283)
T ss_dssp CCEEEEETTCCSSHH---HHHHHHHHHHHHHHTTCC
T ss_pred CceEEEeCCCCcCHh---HHHHHHHHHHHHHHHhcC
Confidence 999999999999863 456778888999988764
No 61
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.85 E-value=2.6e-20 Score=197.73 Aligned_cols=236 Identities=14% Similarity=0.076 Sum_probs=165.0
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCc-cc--cchhhhHHHhhCCcEEEEecCCCCC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA-RG--ILNLSIQYWTSRGWAFVDVNYGGST 533 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~-~~--~~~~~~~~la~~G~~v~~~d~rGs~ 533 (729)
..+.+.+... +|..+.+.+|.|.+ ..++.|+||++||+++... .. .+......|+++||.|+.+||||.+
T Consensus 81 ~~~~~~~~~~-~g~~l~~~v~~p~~------~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~g 153 (361)
T 1jkm_A 81 ETSTETILGV-DGNEITLHVFRPAG------VEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAW 153 (361)
T ss_dssp EEEEEEEECT-TSCEEEEEEEEETT------CCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSE
T ss_pred eeeeeeeecC-CCCeEEEEEEeCCC------CCCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCC
Confidence 3456677776 78789999999976 1236799999999863322 22 4566788888899999999999986
Q ss_pred CCchhHHHhhccCCCcccHHHHHHHHHHHHhCC---CCCCCcEEEEEcChHHHHHHHHHh------CCCcceEEEEeccc
Q 004816 534 GYGREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALA------FRDTFKAGASLYGV 604 (729)
Q Consensus 534 g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~------~~~~~~a~v~~~~~ 604 (729)
|+... ..+.....|+.++++|+.++. .+| +|+|+|||+||.+++.++. +|++++++|+.+|+
T Consensus 154 g~~~~-------~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~ 224 (361)
T 1jkm_A 154 TAEGH-------HPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPY 224 (361)
T ss_dssp ETTEE-------CCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCC
T ss_pred CCCCC-------CCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCc
Confidence 54211 112234789999999998862 333 9999999999999988875 46689999999998
Q ss_pred cCh---------hHHhhhcchh---------hhhhhhhhcCC--hhhhhhcCcc----cccCCCCCCEEEEEeCCCCCCC
Q 004816 605 ADL---------SMLRAETHKF---------ESRYIDNLVGS--EKDYYEKSPI----NFVDKFSCPIILFQGLEDKVVP 660 (729)
Q Consensus 605 ~d~---------~~~~~~~~~~---------~~~~~~~~~~~--~~~~~~~sp~----~~~~~i~~PvL~i~G~~D~~vp 660 (729)
.+. .......... ...+....... .......+|+ ..+.++. |+|+++|++|.+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~ 303 (361)
T 1jkm_A 225 ISGGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNELDPLRD 303 (361)
T ss_dssp CCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH
T ss_pred cccccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcCcCcchh
Confidence 876 2111000000 00011111110 0011122343 2345665 99999999999886
Q ss_pred hHHHHHHHHHHHhCCCCEEEEEECCCCcccC-C----cccH-HHHHHHHHHHHHHHh
Q 004816 661 PDQARKIYKALKENGLPVALVEYEGEQHGFR-K----AENI-KFTLEQQMVFFARVV 711 (729)
Q Consensus 661 ~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~-~----~~~~-~~~~~~~~~fl~~~l 711 (729)
++.++++.|+++|.+++++++++++|.+. . .+.. .++.+.+.+||+++.
T Consensus 304 --~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 304 --EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp --HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 88999999999999999999999999876 2 1333 778899999998874
No 62
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.85 E-value=2e-20 Score=195.32 Aligned_cols=211 Identities=15% Similarity=0.185 Sum_probs=150.0
Q ss_pred CCCCEEEEEcCCCCCC-ccccchhhhHHHhhC-CcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCC
Q 004816 490 EKPPLLVKSHGGPTSE-ARGILNLSIQYWTSR-GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 567 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~-~~~~~~~~~~~la~~-G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 567 (729)
...|+||++|||++.. ....+...+..|+.+ ||.|+++|||++++... ...++|+.++++|+.++ .
T Consensus 78 ~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~-----------~~~~~d~~~a~~~l~~~-~ 145 (322)
T 3k6k_A 78 AGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPF-----------PAAVDDCVAAYRALLKT-A 145 (322)
T ss_dssp CCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSCT-----------THHHHHHHHHHHHHHHH-H
T ss_pred CCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCCC-----------chHHHHHHHHHHHHHHc-C
Confidence 3445599999986432 223455666777765 99999999998765331 13479999999999988 5
Q ss_pred CCCCcEEEEEcChHHHHHHHHHh-CCCc----ceEEEEeccccChhHHhhhcch-------h----hhhhhhhhcC-Chh
Q 004816 568 ADEKRLCITGGSAGGYTTLAALA-FRDT----FKAGASLYGVADLSMLRAETHK-------F----ESRYIDNLVG-SEK 630 (729)
Q Consensus 568 ~d~~ri~i~G~S~GG~~a~~~~~-~~~~----~~a~v~~~~~~d~~~~~~~~~~-------~----~~~~~~~~~~-~~~ 630 (729)
+|+++|+|+|+|+||++|+.++. ++++ ++++|+++|+.++......... . ...+.....+ ...
T Consensus 146 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (322)
T 3k6k_A 146 GSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNLADRDFLAEPDTLGEMSELYVGGEDR 225 (322)
T ss_dssp SSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHHTGGGCSSSCHHHHHHHHHHHHTTSCT
T ss_pred CCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhhccCCCCcCCHHHHHHHHHHhcCCCCC
Confidence 68899999999999999998886 5444 9999999999876422111000 0 0001111111 111
Q ss_pred hhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCC----cccHHHHHHHHHHH
Q 004816 631 DYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRK----AENIKFTLEQQMVF 706 (729)
Q Consensus 631 ~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~~f 706 (729)
.....+|+.......+|+|++||++|.+ ..++.+++++|+.+|+++++++||+++|.|.. .+...+.++.+.+|
T Consensus 226 ~~~~~sp~~~~~~~~pP~li~~G~~D~~--~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~f 303 (322)
T 3k6k_A 226 KNPLISPVYADLSGLPEMLIHVGSEEAL--LSDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHW 303 (322)
T ss_dssp TCTTTCGGGSCCTTCCCEEEEEESSCTT--HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHH
T ss_pred CCCcCCcccccccCCCcEEEEECCcCcc--HHHHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHH
Confidence 1122355554444457999999999987 57899999999999999999999999999753 24467889999999
Q ss_pred HHHHhCCC
Q 004816 707 FARVVGHF 714 (729)
Q Consensus 707 l~~~l~~~ 714 (729)
|+++++..
T Consensus 304 l~~~l~~~ 311 (322)
T 3k6k_A 304 ISARISKL 311 (322)
T ss_dssp HHTTCC--
T ss_pred HHHHHhcc
Confidence 99999744
No 63
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.85 E-value=1.6e-20 Score=199.86 Aligned_cols=238 Identities=17% Similarity=0.177 Sum_probs=166.1
Q ss_pred CCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccch-hhhHHHhhCCcEEEEecCCCCCC
Q 004816 456 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGSTG 534 (729)
Q Consensus 456 ~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~-~~~~~la~~G~~v~~~d~rGs~g 534 (729)
...+.+.+.+. +|..+.++++.|.+. +.++.|+||++||+++.. ..+. ..++.|+++||.|+.+|+||.+.
T Consensus 66 ~~~~~~~~~~~-~g~~~~~~~~~p~~~-----~~~~~p~vv~~hG~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~ 137 (367)
T 2hdw_A 66 VEHRKVTFANR-YGITLAADLYLPKNR-----GGDRLPAIVIGGPFGAVK--EQSSGLYAQTMAERGFVTLAFDPSYTGE 137 (367)
T ss_dssp EEEEEEEEECT-TSCEEEEEEEEESSC-----CSSCEEEEEEECCTTCCT--TSHHHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred ceeEEEEEecC-CCCEEEEEEEeCCCC-----CCCCCCEEEEECCCCCcc--hhhHHHHHHHHHHCCCEEEEECCCCcCC
Confidence 35678888887 899999999998651 145679999999985432 3333 36788999999999999998765
Q ss_pred CchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhh
Q 004816 535 YGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAE 613 (729)
Q Consensus 535 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~ 613 (729)
...... .........+|+.++++++.++..+|.++++++|||+||.+++.++. +| +++++|+.+|. +.......
T Consensus 138 s~~~~~---~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~-~~~~~~~~ 212 (367)
T 2hdw_A 138 SGGQPR---NVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMY-DMTRVMSK 212 (367)
T ss_dssp SCCSSS---SCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC-CHHHHHHH
T ss_pred CCCcCc---cccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccc-cccHHHhh
Confidence 432211 00111235799999999999988788899999999999999999998 76 69999999876 32211100
Q ss_pred -c-----------------------------------c-------hhhhh---hhhhhc---------------CChhhh
Q 004816 614 -T-----------------------------------H-------KFESR---YIDNLV---------------GSEKDY 632 (729)
Q Consensus 614 -~-----------------------------------~-------~~~~~---~~~~~~---------------~~~~~~ 632 (729)
. . ..... +..... .....+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (367)
T 2hdw_A 213 GYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSF 292 (367)
T ss_dssp TTTTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHH
T ss_pred hhccccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHh
Confidence 0 0 00000 000000 011233
Q ss_pred hhcCcccccCCCC-CCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 633 YEKSPINFVDKFS-CPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 633 ~~~sp~~~~~~i~-~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
...++...+.+++ +|+|+++|++|. +++++.++++. .+.+++++++|+++|.+..........+.+.+||+++|
T Consensus 293 ~~~~~~~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 293 MNMPILTYIKEISPRPILLIHGERAH--SRYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp TTSCSCTTGGGGTTSCEEEEEETTCT--THHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred cCCChhHhHHhhcCCceEEEecCCCC--CHHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 3456777788899 999999999998 78888877776 56789999999999974221111126788899999875
No 64
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.85 E-value=5.4e-21 Score=185.87 Aligned_cols=186 Identities=13% Similarity=0.073 Sum_probs=131.7
Q ss_pred CCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHH----HHHHHHHh
Q 004816 489 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCC----SCATFLVG 564 (729)
Q Consensus 489 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~----~~~~~l~~ 564 (729)
.+..++||++||.+. ....+..+++.|...|+.|++||.+|.+.|+..+......+. ...++.. .+++.+.+
T Consensus 19 ~~a~~~Vv~lHG~G~--~~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~ 94 (210)
T 4h0c_A 19 QRAKKAVVMLHGRGG--TAADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQ--PALDSALALVGEVVAEIEA 94 (210)
T ss_dssp TTCSEEEEEECCTTC--CHHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGT--THHHHHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEEeCCCC--CHHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccch--HHHHHHHHHHHHHHHHHHH
Confidence 345689999999633 234455677788888999999999876655443322221111 1233333 33344433
Q ss_pred CCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCC
Q 004816 565 SGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDK 643 (729)
Q Consensus 565 ~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~ 643 (729)
..+|++||+++|+|+||++++.++. +|++|+++|++++........ ... .....
T Consensus 95 -~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~-----------------~~~-------~~~~~ 149 (210)
T 4h0c_A 95 -QGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELA-----------------IGN-------YKGDF 149 (210)
T ss_dssp -TTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCC-----------------GGG-------CCBCC
T ss_pred -hCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhh-----------------hhh-------hhhhc
Confidence 3579999999999999999999987 999999999998853211000 000 00112
Q ss_pred CCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 644 FSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 644 i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
.++|+|++||++|++||+++++++++.|+++|.++++++||+.||.+.. +.++.+.+||.
T Consensus 150 ~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~~-----~el~~i~~wL~ 209 (210)
T 4h0c_A 150 KQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTISG-----DEIQLVNNTIL 209 (210)
T ss_dssp TTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCCH-----HHHHHHHHTTT
T ss_pred cCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcCH-----HHHHHHHHHHc
Confidence 3579999999999999999999999999999999999999999998753 33556666664
No 65
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.84 E-value=6.2e-20 Score=193.16 Aligned_cols=234 Identities=16% Similarity=0.170 Sum_probs=165.3
Q ss_pred EeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHH
Q 004816 462 EFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRE 541 (729)
Q Consensus 462 ~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~ 541 (729)
.+... +|..+.++++.|.+ .+.|+||++||.+.. ...|...+..|+++||.|+++|+||.|......
T Consensus 39 ~~~~~-dg~~l~~~~~~p~~--------~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-- 105 (342)
T 3hju_A 39 HLVNA-DGQYLFCRYWKPTG--------TPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVGHGQSEGER-- 105 (342)
T ss_dssp EEECT-TSCEEEEEEECCSS--------CCSEEEEEECCTTCC--GGGGHHHHHHHHTTTEEEEEECCTTSTTSCSST--
T ss_pred eEEcc-CCeEEEEEEeCCCC--------CCCcEEEEECCCCcc--cchHHHHHHHHHhCCCeEEEEcCCCCcCCCCcC--
Confidence 56666 89999999998854 346899999998544 346777889999999999999999876544221
Q ss_pred hhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhc-chhhh
Q 004816 542 RLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAET-HKFES 619 (729)
Q Consensus 542 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~-~~~~~ 619 (729)
.........++|+.++++++..+ .+.++++|+|||+||++++.++. +|++++++|+.+|..+........ .....
T Consensus 106 -~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 182 (342)
T 3hju_A 106 -MVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAA 182 (342)
T ss_dssp -TCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHH
T ss_pred -CCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHH
Confidence 01111112378999999999887 45679999999999999999998 999999999999976542111000 00000
Q ss_pred hhhhhh-------------cC-Chh---hhh---------------------hcCcccccCCCCCCEEEEEeCCCCCCCh
Q 004816 620 RYIDNL-------------VG-SEK---DYY---------------------EKSPINFVDKFSCPIILFQGLEDKVVPP 661 (729)
Q Consensus 620 ~~~~~~-------------~~-~~~---~~~---------------------~~sp~~~~~~i~~PvL~i~G~~D~~vp~ 661 (729)
.+.... .. ... .+. ..+....+.++++|+|+++|++|.++|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~ 262 (342)
T 3hju_A 183 KVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDS 262 (342)
T ss_dssp HHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSCH
T ss_pred HHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccCh
Confidence 000000 00 000 000 0011234678899999999999999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEEECCCCcccCC--cccHHHHHHHHHHHHHHHhCC
Q 004816 662 DQARKIYKALKENGLPVALVEYEGEQHGFRK--AENIKFTLEQQMVFFARVVGH 713 (729)
Q Consensus 662 ~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~fl~~~l~~ 713 (729)
+.+.++++.+.. ..+++++++++||.+.. ++...+.++.+++||.+++..
T Consensus 263 ~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~ 314 (342)
T 3hju_A 263 KGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 314 (342)
T ss_dssp HHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCC--CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccCC
Confidence 999999888753 25799999999998643 344667888999999999863
No 66
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.84 E-value=5.2e-20 Score=186.13 Aligned_cols=229 Identities=16% Similarity=0.182 Sum_probs=156.0
Q ss_pred EEEEe-eccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCch
Q 004816 459 ELIEF-PTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGR 537 (729)
Q Consensus 459 ~~~~~-~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~ 537 (729)
+.+++ ... +|.++.+..+.+.+ ...|+||++||++.....+.+......++++||.|+++|+||.|....
T Consensus 12 ~~~~~~~~~-~g~~l~~~~~~~~~--------~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~ 82 (270)
T 3llc_A 12 HAITVGQGS-DARSIAALVRAPAQ--------DERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGG 82 (270)
T ss_dssp EEEEESSGG-GCEEEEEEEECCSS--------TTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCS
T ss_pred ceEEEeecc-CcceEEEEeccCCC--------CCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCC
Confidence 44555 455 89999987776643 236899999998655444445557788888999999999998776543
Q ss_pred hHHHhhccCCCc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh----CC---CcceEEEEeccccChhH
Q 004816 538 EFRERLLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA----FR---DTFKAGASLYGVADLSM 609 (729)
Q Consensus 538 ~~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~----~~---~~~~a~v~~~~~~d~~~ 609 (729)
.... ... ...+|+.++++++. .++++++|||+||.+++.++. +| ++++++|+.+|..++..
T Consensus 83 ~~~~-----~~~~~~~~d~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~ 151 (270)
T 3llc_A 83 AFRD-----GTISRWLEEALAVLDHFK------PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTS 151 (270)
T ss_dssp CGGG-----CCHHHHHHHHHHHHHHHC------CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHH
T ss_pred cccc-----ccHHHHHHHHHHHHHHhc------cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchh
Confidence 3211 111 11556666666652 578999999999999988875 67 89999999999877654
Q ss_pred Hhhh--c-chhhhhhhhh--------hcCC--------hhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHH
Q 004816 610 LRAE--T-HKFESRYIDN--------LVGS--------EKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKA 670 (729)
Q Consensus 610 ~~~~--~-~~~~~~~~~~--------~~~~--------~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~ 670 (729)
.... . ......+... .... ...+........+.++++|+|+++|++|.++|++.+.++++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~ 231 (270)
T 3llc_A 152 DLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEH 231 (270)
T ss_dssp HTTGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHh
Confidence 2110 0 0000000000 0000 012223334456778899999999999999999999998888
Q ss_pred HHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 671 LKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 671 l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
+.. .+++++++++++|.+...+......+.+.+||++
T Consensus 232 ~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 232 LPA--DDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp SCS--SSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred cCC--CCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 754 3589999999999877666667777777777754
No 67
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.84 E-value=2.8e-20 Score=188.06 Aligned_cols=199 Identities=16% Similarity=0.131 Sum_probs=153.0
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCC-CccccchhhhHHHhhCCcEEEEecCCCCCCCch
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSRGWAFVDVNYGGSTGYGR 537 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~ 537 (729)
+...++.. ++..+.+.+|.|.+ ++.|+||++||+++. .....|...++.|+++||.|+++|+||++.+..
T Consensus 39 ~~~~i~~~-~~~~~~~~~~~p~~--------~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~~ 109 (262)
T 2pbl_A 39 ARLNLSYG-EGDRHKFDLFLPEG--------TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRI 109 (262)
T ss_dssp EEEEEESS-SSTTCEEEEECCSS--------SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCH
T ss_pred CccccccC-CCCCceEEEEccCC--------CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCCh
Confidence 44455544 56566667787753 356899999997532 344567778889999999999999998764321
Q ss_pred hHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C------CCcceEEEEeccccChhHH
Q 004816 538 EFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F------RDTFKAGASLYGVADLSML 610 (729)
Q Consensus 538 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~------~~~~~a~v~~~~~~d~~~~ 610 (729)
. ...+|+.++++++..+.. ++++|+|||+||++++.++. + +++++++|+.+|+.++...
T Consensus 110 ~-----------~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~ 175 (262)
T 2pbl_A 110 S-----------EITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPL 175 (262)
T ss_dssp H-----------HHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGG
T ss_pred H-----------HHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHH
Confidence 1 227899999999988643 79999999999999999998 5 8999999999999886543
Q ss_pred hhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCccc
Q 004816 611 RAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGF 690 (729)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~ 690 (729)
.... +..........+...+|...+.++++|+|+++|++|..++++++.++++.++ ++++++++++|.+
T Consensus 176 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~H~~ 244 (262)
T 2pbl_A 176 LRTS------MNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-----ADHVIAFEKHHFN 244 (262)
T ss_dssp GGST------THHHHCCCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-----CEEEEETTCCTTT
T ss_pred Hhhh------hhhhhCCCHHHHHhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-----CeEEEeCCCCcch
Confidence 2211 1111112345666778888888999999999999999999999999999986 6999999999976
Q ss_pred C
Q 004816 691 R 691 (729)
Q Consensus 691 ~ 691 (729)
.
T Consensus 245 ~ 245 (262)
T 2pbl_A 245 V 245 (262)
T ss_dssp T
T ss_pred H
Confidence 4
No 68
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=3.4e-20 Score=215.97 Aligned_cols=311 Identities=10% Similarity=0.035 Sum_probs=201.8
Q ss_pred cCCHHHHhccC--CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCC--ceEEEE
Q 004816 78 PLTADVVSGAS--KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGG--GAFRIF 153 (729)
Q Consensus 78 ~lt~e~i~~~~--~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~--~~~~~~ 153 (729)
++|+|+++... ....++.|+|++.+.+.. .++. |+.++.. +|+.+.++... .. ...+. ..|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~----~d~~--i~~~~~~-~g~~~~~~~~~-~~----~~~~~~~~~~SpD 70 (719)
T 1z68_A 3 ALTLKDILNGTFSYKTFFPNWISGQEYLHQS----ADNN--IVLYNIE-TGQSYTILSNR-TM----KSVNASNYGLSPD 70 (719)
T ss_dssp CCCHHHHHHTTTCCCCCCCEESSSSEEEEEC----TTSC--EEEEESS-SCCEEEEECHH-HH----HTTTCSEEEECTT
T ss_pred cccHHHHhcCcccCCCCccEECCCCeEEEEc----CCCC--EEEEEcC-CCcEEEEEccc-cc----cccceeeEEECCC
Confidence 58899998872 223488999933444433 2344 4444544 23556665421 00 00122 335555
Q ss_pred CCEEEEEECC--------CCcEEEEeCCCCCCCC---eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceE
Q 004816 154 GDTVIFSNYK--------DQRLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTE 222 (729)
Q Consensus 154 ~~~i~~~~~~--------~~~l~~~d~~~~~~~~---~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~ 222 (729)
++.|+|.... ++.||++|+++ ++. ++|+.. ...++|||||++|+|+.+ .+
T Consensus 71 g~~la~~~~~~~~~~~s~~~~i~~~d~~~--g~~~~~~~l~~~-------~~~~~~SPDG~~la~~~~----------~~ 131 (719)
T 1z68_A 71 RQFVYLESDYSKLWRYSYTATYYIYDLSN--GEFVRGNELPRP-------IQYLCWSPVGSKLAYVYQ----------NN 131 (719)
T ss_dssp SSEEEEEEEEEECSSSCEEEEEEEEETTT--TEECCSSCCCSS-------BCCEEECSSTTCEEEEET----------TE
T ss_pred CCeEEEEecCceeEEeecceEEEEEECCC--CccccceecCcc-------cccceECCCCCEEEEEEC----------Ce
Confidence 6688887652 36899999998 765 555422 477899999999999964 46
Q ss_pred EEEEEcCCCceEEeeeCCC-------------------eeeeeeeCCCCCeEEEEEecCCCCC-----------------
Q 004816 223 IVAIALNGQNIQVLVSGSD-------------------FYAFPRMDPRGERMAWIEWHHPNMP----------------- 266 (729)
Q Consensus 223 l~~~dl~~g~~~~lt~~~~-------------------~~~~~~~SPDG~~la~~~~~~~~~~----------------- 266 (729)
|+++++++++.++++.... ....++|||||++|||.+.+....+
T Consensus 132 i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 211 (719)
T 1z68_A 132 IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN 211 (719)
T ss_dssp EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcccee
Confidence 9999999999888874321 1147999999999999986643211
Q ss_pred ---------CCCcEEEEEEecCCCCee-eeEE-----ecCCCCCccccccCceeCCCCcEEEEE-ecCCCceEEEEEE--
Q 004816 267 ---------WDKAELWVGYISENGDVY-KRVC-----VAGFDPTIVESPTEPKWSSKGELFFVT-DRKNGFWNLHKWI-- 328 (729)
Q Consensus 267 ---------~~~~~l~~~d~~~~g~~~-~~~~-----~~~~~~~~~~~~~~~~wspDG~l~~~~-~~~~g~~~l~~~d-- 328 (729)
....+|+++|++ +++.. ...+ +.+.. ..+..+.|||||++++.. ++..+...|+++|
T Consensus 212 ~~yp~~g~~~~~~~l~~~d~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~ 286 (719)
T 1z68_A 212 IPYPKAGAKNPVVRIFIIDTT-YPAYVGPQEVPVPAMIASSD----YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFR 286 (719)
T ss_dssp EECCBTTSCCCEEEEEEEESS-CHHHHCCEECCCCHHHHTSC----EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEEC
T ss_pred ecCCCCCCCCCeeEEEEEECC-CCCccceeEccCCccCCCCc----ceEEEeEEeCCCeEEEEEeccccCeEEEEEEccc
Confidence 123479999998 55431 0111 11233 556789999998855553 3324557899999
Q ss_pred --cCCCeEEEeec----c-Ccccc-----CCcccccCcceeeeeecCCCCEEEE-EEEECCeEEEEEEECCCCceEeecc
Q 004816 329 --ESNNEVLAIYS----L-DAEFS-----RPLWVFGINSYEIIQSHGEKNLIAC-SYRQNGRSYLGILDDFGHSLSLLDI 395 (729)
Q Consensus 329 --~~~g~~~~l~~----~-~~~~~-----~~~w~~~~~~~~~l~~~~~~~~l~~-~s~~~g~~~ly~~d~~~g~~~~lt~ 395 (729)
+++++.+.++. . ...+. .+.|++ +++.+++ .+..+|..+||++++++++.++|+.
T Consensus 287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp------------dg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~ 354 (719)
T 1z68_A 287 EDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSY------------DAISYYKIFSDKDGYKHIHYIKDTVENAIQITS 354 (719)
T ss_dssp SSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECT------------TSSCEEEEEECTTSCEEEEEESSCSTTCEECSC
T ss_pred CCCCCCceEEEEecccccCCceEccccCCccEECC------------CCCeEEEEEEccCCceEEEEEECCCCceEeccc
Confidence 88887776662 1 22222 455554 7777766 4667889999999999999999998
Q ss_pred CCcceEEe-eeeCCEEEEEEeCC----CCCceEEEEEcCCC--cceeee
Q 004816 396 PFTDIDNI-TLGNDCLFVEGASG----VEPSSVAKVTLDDH--KLKAVD 437 (729)
Q Consensus 396 ~~~~v~~~-~~~~~~~~~~~~~~----~~~~~ly~~d~~~~--~~~~lt 437 (729)
+.+.+..+ ..+++.+++.+ +. .....||.++++++ +.++|+
T Consensus 355 ~~~~v~~~~~~d~~~i~~~~-~~~~~~~~~~~l~~~~~~~g~~~~~~l~ 402 (719)
T 1z68_A 355 GKWEAINIFRVTQDSLFYSS-NEFEEYPGRRNIYRISIGSYPPSKKCVT 402 (719)
T ss_dssp SSSCEEEEEEECSSEEEEEE-SCGGGCTTCBEEEEEECSSSSCCEEESS
T ss_pred CceEEEEEEEEeCCEEEEEE-ecCCCCCceEEEEEEeCCCCCCCceecc
Confidence 77777655 33555555554 43 34456999998766 334443
No 69
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.84 E-value=2.4e-20 Score=193.30 Aligned_cols=191 Identities=16% Similarity=0.186 Sum_probs=152.3
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.. .+.++.|.. ..+.|+||++||.+.. ...|..+++.|+++||.|+.+|+||.+.....
T Consensus 80 ~g~~-~~~~~~p~~-------~~~~p~vv~~HG~~~~--~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~~--------- 140 (306)
T 3vis_A 80 DGFG-GGTIYYPRE-------NNTYGAIAISPGYTGT--QSSIAWLGERIASHGFVVIAIDTNTTLDQPDS--------- 140 (306)
T ss_dssp SSSC-CEEEEEESS-------CSCEEEEEEECCTTCC--HHHHHHHHHHHHTTTEEEEEECCSSTTCCHHH---------
T ss_pred CCCc-ceEEEeeCC-------CCCCCEEEEeCCCcCC--HHHHHHHHHHHHhCCCEEEEecCCCCCCCcch---------
Confidence 4443 235566654 2367999999997543 34567788999999999999999986553321
Q ss_pred CcccHHHHHHHHHHHHhC------CCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhh
Q 004816 548 GIVDVNDCCSCATFLVGS------GKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESR 620 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~------~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 620 (729)
..+|+.++++++.+. ..+|.+|++++|||+||++++.++. +|+ ++++|+++|...
T Consensus 141 ---~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~-------------- 202 (306)
T 3vis_A 141 ---RARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL-------------- 202 (306)
T ss_dssp ---HHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS--------------
T ss_pred ---HHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC--------------
Confidence 247889999999987 6778899999999999999999998 776 999999988543
Q ss_pred hhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChH-HHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHH
Q 004816 621 YIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPD-QARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFT 699 (729)
Q Consensus 621 ~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~-~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~ 699 (729)
...+.++++|+|+++|++|.++|++ ++..+++.++..+ +++++++++++|.+... ...+.
T Consensus 203 -----------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~~-~~~~~ 263 (306)
T 3vis_A 203 -----------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPT-DKAYLELDGASHFAPNI-TNKTI 263 (306)
T ss_dssp -----------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGGS-CCHHH
T ss_pred -----------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCC-CceEEEECCCCccchhh-chhHH
Confidence 1234567899999999999999998 6999999998766 89999999999987543 23678
Q ss_pred HHHHHHHHHHHhCCC
Q 004816 700 LEQQMVFFARVVGHF 714 (729)
Q Consensus 700 ~~~~~~fl~~~l~~~ 714 (729)
.+.+.+||+++++..
T Consensus 264 ~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 264 GMYSVAWLKRFVDED 278 (306)
T ss_dssp HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHccCc
Confidence 889999999999743
No 70
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=5.5e-19 Score=191.30 Aligned_cols=258 Identities=12% Similarity=0.094 Sum_probs=186.7
Q ss_pred CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCC--CcEEEEeCCCCC
Q 004816 99 HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD--QRLYKHSIDSKD 176 (729)
Q Consensus 99 g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~d~~~~~ 176 (729)
+++++|+.....+.....|+.++.+ ++..+.++..... .....|+++++.|++..... ..|+++|+.+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~-------v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t-- 212 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQP-------LMSPAWSPDGSKLAYVTFESGRSALVIQTLAN-- 212 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSC-------EEEEEECTTSSEEEEEECTTSSCEEEEEETTT--
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCc-------ceeeEEcCCCCEEEEEEecCCCcEEEEEECCC--
Confidence 7788888764332212456666555 2344555432101 11234555667888887654 4899999998
Q ss_pred CCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEE
Q 004816 177 SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAFPRMDPRGERMA 256 (729)
Q Consensus 177 ~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la 256 (729)
++.++++.. ......++|||||++|+|+..... ...||++|+++++.++++........++|||||++|+
T Consensus 213 g~~~~l~~~----~~~~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~ 282 (415)
T 2hqs_A 213 GAVRQVASF----PRHNGAPAFSPDGSKLAFALSKTG------SLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLA 282 (415)
T ss_dssp CCEEEEECC----SSCEEEEEECTTSSEEEEEECTTS------SCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEE
T ss_pred CcEEEeecC----CCcccCEEEcCCCCEEEEEEecCC------CceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEE
Confidence 777777765 245678999999999998876432 2579999999999988887767778899999999999
Q ss_pred EEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEE
Q 004816 257 WIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVL 335 (729)
Q Consensus 257 ~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~ 335 (729)
|.+.+. ...+||++|+. +++. . .+.... .....+.|||||+ |++.... .+...|+++|+++++.+
T Consensus 283 ~~s~~~-----g~~~i~~~d~~-~~~~--~-~l~~~~----~~~~~~~~spdG~~l~~~~~~-~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 283 FTSDQA-----GRPQVYKVNIN-GGAP--Q-RITWEG----SQNQDADVSSDGKFMVMVSSN-GGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp EEECTT-----SSCEEEEEETT-SSCC--E-ECCCSS----SEEEEEEECTTSSEEEEEEEC-SSCEEEEEEETTTCCEE
T ss_pred EEECCC-----CCcEEEEEECC-CCCE--E-EEecCC----CcccCeEECCCCCEEEEEECc-CCceEEEEEECCCCCEE
Confidence 988322 23579999998 6654 2 222222 3456789999999 7777766 56789999999999888
Q ss_pred EeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccCCcceEEe
Q 004816 336 AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNI 403 (729)
Q Consensus 336 ~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~~~~v~~~ 403 (729)
.++... ....+.|++ +++.|++.+...+...||+++++++..+.|+.....+..+
T Consensus 349 ~l~~~~-~~~~~~~sp------------dg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~ 403 (415)
T 2hqs_A 349 VLSSTF-LDETPSLAP------------NGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFP 403 (415)
T ss_dssp ECCCSS-SCEEEEECT------------TSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEE
T ss_pred EecCCC-CcCCeEEcC------------CCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCC
Confidence 776433 444566665 8888999999889999999999999999998877766655
No 71
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.84 E-value=7.3e-20 Score=185.09 Aligned_cols=178 Identities=18% Similarity=0.207 Sum_probs=143.4
Q ss_pred CCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHh----
Q 004816 489 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVG---- 564 (729)
Q Consensus 489 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~---- 564 (729)
.++.|+||++||.... ...|...++.|+++||.|+.+|+||.+..... ...|+..+++++.+
T Consensus 51 ~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~------------~~~d~~~~~~~l~~~~~~ 116 (262)
T 1jfr_A 51 DGTFGAVVISPGFTAY--QSSIAWLGPRLASQGFVVFTIDTNTTLDQPDS------------RGRQLLSALDYLTQRSSV 116 (262)
T ss_dssp TCCEEEEEEECCTTCC--GGGTTTHHHHHHTTTCEEEEECCSSTTCCHHH------------HHHHHHHHHHHHHHTSTT
T ss_pred CCCCCEEEEeCCcCCC--chhHHHHHHHHHhCCCEEEEeCCCCCCCCCch------------hHHHHHHHHHHHHhcccc
Confidence 3457999999998543 34566788899999999999999986643321 24678889999987
Q ss_pred CCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCC
Q 004816 565 SGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDK 643 (729)
Q Consensus 565 ~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~ 643 (729)
...++.++++++|||+||++++.++. +|+ ++++|+.+|... ...+.+
T Consensus 117 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~-------------------------------~~~~~~ 164 (262)
T 1jfr_A 117 RTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT-------------------------------DKTWPE 164 (262)
T ss_dssp GGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-------------------------------CCCCTT
T ss_pred ccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc-------------------------------cccccc
Confidence 34457789999999999999999997 776 899999888532 123556
Q ss_pred CCCCEEEEEeCCCCCCChHH-HHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhCCC
Q 004816 644 FSCPIILFQGLEDKVVPPDQ-ARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVGHF 714 (729)
Q Consensus 644 i~~PvL~i~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~ 714 (729)
+++|+|+++|++|.+++++. +.++++.++ .+.+++++++++++|.+... ...++.+.+.+||+++++..
T Consensus 165 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~H~~~~~-~~~~~~~~i~~fl~~~l~~~ 234 (262)
T 1jfr_A 165 LRTPTLVVGADGDTVAPVATHSKPFYESLP-GSLDKAYLELRGASHFTPNT-SDTTIAKYSISWLKRFIDSD 234 (262)
T ss_dssp CCSCEEEEEETTCSSSCTTTTHHHHHHHSC-TTSCEEEEEETTCCTTGGGS-CCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEecCccccCCchhhHHHHHHHhh-cCCCceEEEeCCCCcCCccc-chHHHHHHHHHHHHHHhcCc
Confidence 78999999999999999998 999999984 45688999999999987543 33678899999999999744
No 72
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.84 E-value=4.2e-20 Score=186.75 Aligned_cols=243 Identities=15% Similarity=0.108 Sum_probs=161.3
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchh--hhHHH-hhCCcEEEEecCCCCCC
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL--SIQYW-TSRGWAFVDVNYGGSTG 534 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~--~~~~l-a~~G~~v~~~d~rGs~g 534 (729)
.+.+++.+...|..+.++++.|.+......+.++.|+||++||+++... .+.. ....+ .+.|+.|+.+|+++++.
T Consensus 7 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 84 (263)
T 2uz0_A 7 VMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHN--SWLKRTNVERLLRGTNLIVVMPNTSNGWY 84 (263)
T ss_dssp EEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCTT--HHHHHSCHHHHTTTCCCEEEECCCTTSTT
T ss_pred EeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHH--HHHhccCHHHHHhcCCeEEEEECCCCCcc
Confidence 4566776654788999999999873101112467899999999864432 3333 23444 45799999999987643
Q ss_pred CchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHhCCCcceEEEEeccccChhHHhhhc
Q 004816 535 YGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVADLSMLRAET 614 (729)
Q Consensus 535 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~~~~~a~v~~~~~~d~~~~~~~~ 614 (729)
..... ...+.....+|+...++.+..+..+|.++++|+|||+||++++.++.+|++|+++++.+|..++..+....
T Consensus 85 ~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~v~~~~~~~~~~~~~~~ 160 (263)
T 2uz0_A 85 TDTQY----GFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLALTTNRFSHAASFSGALSFQNFSPES 160 (263)
T ss_dssp SBCTT----SCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHHHHCCCSEEEEESCCCCSSSCCGGG
T ss_pred ccCCC----cccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHhCccccceEEEecCCcchhhccccc
Confidence 21110 00000112456666666654434567899999999999999988766888999999999988765422100
Q ss_pred c-hhhhhhhhhhcCC--hhhhhhcCcccccCCCC--CCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcc
Q 004816 615 H-KFESRYIDNLVGS--EKDYYEKSPINFVDKFS--CPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHG 689 (729)
Q Consensus 615 ~-~~~~~~~~~~~~~--~~~~~~~sp~~~~~~i~--~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~ 689 (729)
. .....+....++. ...+...+|...+.+++ +|+|++||++|.++ .++.++++.|+..|.+++++++++ +|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v--~~~~~~~~~l~~~g~~~~~~~~~g-~H~ 237 (263)
T 2uz0_A 161 QNLGSPAYWRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLY--EANNLAVKNLKKLGFDVTYSHSAG-THE 237 (263)
T ss_dssp TTCSCHHHHHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTH--HHHHHHHHHHHHTTCEEEEEEESC-CSS
T ss_pred cccccchhHHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhh--HHHHHHHHHHHHCCCCeEEEECCC-CcC
Confidence 0 0011112222221 23445566766676665 79999999999987 457899999999999999999999 997
Q ss_pred cCCcccHHHHHHHHHHHHHHHhC
Q 004816 690 FRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 690 ~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
+. .+...++.+++||.++|+
T Consensus 238 ~~---~~~~~~~~~~~~l~~~l~ 257 (263)
T 2uz0_A 238 WY---YWEKQLEVFLTTLPIDFK 257 (263)
T ss_dssp HH---HHHHHHHHHHHHSSSCCC
T ss_pred HH---HHHHHHHHHHHHHHhhcc
Confidence 63 335677889999988887
No 73
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.84 E-value=2.2e-19 Score=184.40 Aligned_cols=234 Identities=16% Similarity=0.179 Sum_probs=163.9
Q ss_pred EeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHH
Q 004816 462 EFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRE 541 (729)
Q Consensus 462 ~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~ 541 (729)
.+... +|.++.++++.|.+ ++.|+||++||.+.. ...|...++.|+++||.|+++|+||.|......
T Consensus 21 ~~~~~-~g~~l~~~~~~~~~--------~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-- 87 (303)
T 3pe6_A 21 HLVNA-DGQYLFCRYWAPTG--------TPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVGHGQSEGER-- 87 (303)
T ss_dssp EEECT-TSCEEEEEEECCSS--------CCSEEEEEECCTTCC--GGGGHHHHHHHHHTTEEEEEECCTTSTTSCSST--
T ss_pred eEecC-CCeEEEEEEeccCC--------CCCeEEEEECCCCch--hhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCC--
Confidence 56665 89999999998754 346899999998543 346778889999999999999999876544221
Q ss_pred hhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhc-chhhh
Q 004816 542 RLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAET-HKFES 619 (729)
Q Consensus 542 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~-~~~~~ 619 (729)
.....-...++|+.++++++..+ .+.++++++|||+||.+++.++. +|++++++|+.+|........... .....
T Consensus 88 -~~~~~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 164 (303)
T 3pe6_A 88 -MVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAA 164 (303)
T ss_dssp -TCCSSTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHH
Confidence 00001112378899999998876 34579999999999999999998 999999999999976543211100 00000
Q ss_pred hhhhhhc-------------C-Chh---hhhh---------------------cCcccccCCCCCCEEEEEeCCCCCCCh
Q 004816 620 RYIDNLV-------------G-SEK---DYYE---------------------KSPINFVDKFSCPIILFQGLEDKVVPP 661 (729)
Q Consensus 620 ~~~~~~~-------------~-~~~---~~~~---------------------~sp~~~~~~i~~PvL~i~G~~D~~vp~ 661 (729)
....... . +.. .+.. ......+.++++|+|+++|++|..+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 244 (303)
T 3pe6_A 165 KVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDS 244 (303)
T ss_dssp HHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCH
T ss_pred HHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCCh
Confidence 0000000 0 000 0000 011134678899999999999999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEEECCCCcccCC--cccHHHHHHHHHHHHHHHhCC
Q 004816 662 DQARKIYKALKENGLPVALVEYEGEQHGFRK--AENIKFTLEQQMVFFARVVGH 713 (729)
Q Consensus 662 ~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~fl~~~l~~ 713 (729)
+.++++++.+.. ..+++++++++||.+.. ++...+.++.+++||.+++..
T Consensus 245 ~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~ 296 (303)
T 3pe6_A 245 KGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 296 (303)
T ss_dssp HHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHhccc--CCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCC
Confidence 999999888753 35799999999998643 344668888999999998863
No 74
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.83 E-value=1.6e-19 Score=178.52 Aligned_cols=189 Identities=15% Similarity=0.056 Sum_probs=141.3
Q ss_pred CCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEe-------------------cCCCCCCCchhHHHhhccCCCc
Q 004816 489 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDV-------------------NYGGSTGYGREFRERLLGRWGI 549 (729)
Q Consensus 489 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~-------------------d~rGs~g~g~~~~~~~~~~~~~ 549 (729)
.++.|+||++||.++. ...|...+..|+++||.|+++ |++|............ .
T Consensus 20 ~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~~~~~-----~ 92 (232)
T 1fj2_A 20 RKATAAVIFLHGLGDT--GHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGI-----K 92 (232)
T ss_dssp SCCSEEEEEECCSSSC--HHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHH-----H
T ss_pred CCCCceEEEEecCCCc--cchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcccccccHHH-----H
Confidence 4567999999998543 344666777888889999998 5554311110000000 0
Q ss_pred ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCC
Q 004816 550 VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGS 628 (729)
Q Consensus 550 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 628 (729)
...+|+.++++++.+ ..+|.++++++|||+||++++.++. +|++++++|+.+|..+......
T Consensus 93 ~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~---------------- 155 (232)
T 1fj2_A 93 QAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFP---------------- 155 (232)
T ss_dssp HHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSC----------------
T ss_pred HHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcccc----------------
Confidence 125677777887776 5577799999999999999999998 8999999999999765432110
Q ss_pred hhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCC--EEEEEECCCCcccCCcccHHHHHHHHHHH
Q 004816 629 EKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLP--VALVEYEGEQHGFRKAENIKFTLEQQMVF 706 (729)
Q Consensus 629 ~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~--~~~~~~~~~gH~~~~~~~~~~~~~~~~~f 706 (729)
.....+..+++|+|+++|++|.++|++.++++++.+++.+.+ ++++++++++|.+. .+..+.+.+|
T Consensus 156 -------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~-----~~~~~~i~~~ 223 (232)
T 1fj2_A 156 -------QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC-----QQEMMDVKQF 223 (232)
T ss_dssp -------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC-----HHHHHHHHHH
T ss_pred -------ccccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccC-----HHHHHHHHHH
Confidence 011235667899999999999999999999999999988854 99999999999872 2445889999
Q ss_pred HHHHhCC
Q 004816 707 FARVVGH 713 (729)
Q Consensus 707 l~~~l~~ 713 (729)
|.++++.
T Consensus 224 l~~~l~~ 230 (232)
T 1fj2_A 224 IDKLLPP 230 (232)
T ss_dssp HHHHSCC
T ss_pred HHHhcCC
Confidence 9999874
No 75
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.83 E-value=1e-19 Score=184.94 Aligned_cols=191 Identities=19% Similarity=0.151 Sum_probs=140.5
Q ss_pred CCCCCCEEEEEcCCCCCCccccchhhhHHHhhC--CcEEEEecCC---CCCCCchhHHHhh--ccCCC-------cccHH
Q 004816 488 PEEKPPLLVKSHGGPTSEARGILNLSIQYWTSR--GWAFVDVNYG---GSTGYGREFRERL--LGRWG-------IVDVN 553 (729)
Q Consensus 488 ~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~--G~~v~~~d~r---Gs~g~g~~~~~~~--~~~~~-------~~~~~ 553 (729)
++++.|+||++||.+ .....+..+++.|+.+ ++.+++++-+ ...+.|..|.... ..... ....+
T Consensus 62 ~~~~~plVI~LHG~G--~~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~ 139 (285)
T 4fhz_A 62 PGEATSLVVFLHGYG--ADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAAR 139 (285)
T ss_dssp TTCCSEEEEEECCTT--BCHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEEcCCC--CCHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHH
Confidence 467789999999963 3334455566777654 8899988732 1223454442110 00000 01145
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhh
Q 004816 554 DCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDY 632 (729)
Q Consensus 554 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (729)
++.+.++.+.++..+|++||+|+|+|+||++++.++. +|++|+++|++++....... +
T Consensus 140 ~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~~---------------------~ 198 (285)
T 4fhz_A 140 DLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPER---------------------L 198 (285)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHHH---------------------H
T ss_pred HHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCchh---------------------h
Confidence 5667777777777899999999999999999999987 99999999999885422110 0
Q ss_pred hhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 633 YEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 633 ~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
. ...+.++|+|++||++|.+||+++++++++.|+++|.++++++|++.||.+. .+.++.+.+||+++|.
T Consensus 199 ~------~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~-----~~~l~~~~~fL~~~Lp 267 (285)
T 4fhz_A 199 A------EEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA-----PDGLSVALAFLKERLP 267 (285)
T ss_dssp H------HHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HHHHHHHHHHHHHHCC
T ss_pred h------hhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-----HHHHHHHHHHHHHHCc
Confidence 0 0123468999999999999999999999999999999999999999999874 2456789999999995
No 76
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.82 E-value=2e-19 Score=179.48 Aligned_cols=210 Identities=13% Similarity=0.073 Sum_probs=149.1
Q ss_pred CCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCC-chhHHHhhccCCCcccHHHHHHHHHHHHhCCCCC
Q 004816 491 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGY-GREFRERLLGRWGIVDVNDCCSCATFLVGSGKAD 569 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~-g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 569 (729)
+.|+||++||.+.+ ...|...++.|+++||.|+++|+||.+.. +...... ..+ ....+|+.++++++..+
T Consensus 21 ~~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~--~~~-~~~~~d~~~~i~~l~~~---- 91 (251)
T 3dkr_A 21 TDTGVVLLHAYTGS--PNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTK--GNP-DIWWAESSAAVAHMTAK---- 91 (251)
T ss_dssp SSEEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHH--CCH-HHHHHHHHHHHHHHHTT----
T ss_pred CCceEEEeCCCCCC--HHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCc--ccH-HHHHHHHHHHHHHHHHh----
Confidence 45789999997544 34677888999999999999999987765 2222211 011 11268889999999876
Q ss_pred CCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhH--HhhhcchhhhhhhhhhcCC-------------hhhhh
Q 004816 570 EKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSM--LRAETHKFESRYIDNLVGS-------------EKDYY 633 (729)
Q Consensus 570 ~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~-------------~~~~~ 633 (729)
.++++++|||+||++++.++. +|++++++++.+|...... .... ..+..........+ ...+.
T Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (251)
T 3dkr_A 92 YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF-LKYAEYMNRLAGKSDESTQILAYLPGQLAAID 170 (251)
T ss_dssp CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHH-HHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHH-HHHHHHHHhhcccCcchhhHHhhhHHHHHHHH
Confidence 579999999999999999998 8999999999998765321 1000 00000000000000 00000
Q ss_pred --hcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 634 --EKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 634 --~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
.......+.++++|+|+++|++|..+|++.+.++++.+... .+++++++++++|.+....+..+..+.+.+|+++..
T Consensus 171 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 171 QFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp HHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhHHHHHHHHHHHhhc
Confidence 01123456788999999999999999999999999998764 578999999999988665567889999999998754
No 77
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.82 E-value=7.7e-19 Score=178.19 Aligned_cols=218 Identities=15% Similarity=0.093 Sum_probs=153.0
Q ss_pred CCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcccc-----chhhhHHHhhC----CcEEEE
Q 004816 456 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-----LNLSIQYWTSR----GWAFVD 526 (729)
Q Consensus 456 ~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~-----~~~~~~~la~~----G~~v~~ 526 (729)
.+.+.+++.+..+|..+.+++|.|.+.. +.+++|+||++||++.....+. +...++.|+++ ||.|+.
T Consensus 30 g~~~~~~~~s~~~~~~~~~~v~~P~~~~----~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~ 105 (268)
T 1jjf_A 30 GQVVNISYFSTATNSTRPARVYLPPGYS----KDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVT 105 (268)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECTTCC----TTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEE
T ss_pred ceEEEEEEeccccCCceEEEEEeCCCCC----CCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEE
Confidence 3456777776546889999999998732 2567899999999865432221 12246667776 599999
Q ss_pred ecCCCCCCC-chhHHHhhccCCCcccHHH-HHHHHHHHHhCCCC--CCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEe
Q 004816 527 VNYGGSTGY-GREFRERLLGRWGIVDVND-CCSCATFLVGSGKA--DEKRLCITGGSAGGYTTLAALA-FRDTFKAGASL 601 (729)
Q Consensus 527 ~d~rGs~g~-g~~~~~~~~~~~~~~~~~D-~~~~~~~l~~~~~~--d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~ 601 (729)
+|+++.+.. ...+.. ..++ +..+++++.++..+ |++|++|+|+|+||++++.++. +|++|+++++.
T Consensus 106 ~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~ 176 (268)
T 1jjf_A 106 PNTNAAGPGIADGYEN---------FTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPI 176 (268)
T ss_dssp ECCCCCCTTCSCHHHH---------HHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEE
T ss_pred eCCCCCCccccccHHH---------HHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEe
Confidence 999975431 111110 1233 45566777665444 7899999999999999999987 89999999999
Q ss_pred ccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCC-CEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEE
Q 004816 602 YGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSC-PIILFQGLEDKVVPPDQARKIYKALKENGLPVAL 680 (729)
Q Consensus 602 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~-PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 680 (729)
+|..++.... ..+.+... ....+. |+|++||++|.++|. ++++++.|+++|+++++
T Consensus 177 s~~~~~~~~~------------~~~~~~~~---------~~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~~~~~ 233 (268)
T 1jjf_A 177 SAAPNTYPNE------------RLFPDGGK---------AAREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINHVY 233 (268)
T ss_dssp SCCTTSCCHH------------HHCTTTTH---------HHHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCCEE
T ss_pred CCCCCCCchh------------hhcCcchh---------hhhhcCceEEEEecCCCCCccH--HHHHHHHHHHCCCceEE
Confidence 9976542210 00111000 001134 499999999998874 78899999999999999
Q ss_pred EEECCCCcccCCcccHHHHHHHHHHHHHHH-hC
Q 004816 681 VEYEGEQHGFRKAENIKFTLEQQMVFFARV-VG 712 (729)
Q Consensus 681 ~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~-l~ 712 (729)
+++++++|.+. .+...+..+++||.+. +.
T Consensus 234 ~~~~g~~H~~~---~~~~~~~~~~~~l~~~~~~ 263 (268)
T 1jjf_A 234 WLIQGGGHDFN---VWKPGLWNFLQMADEAGLT 263 (268)
T ss_dssp EEETTCCSSHH---HHHHHHHHHHHHHHHHTTT
T ss_pred EEcCCCCcCHh---HHHHHHHHHHHHHHhcCcc
Confidence 99999999873 3456678889999886 44
No 78
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.82 E-value=1.1e-19 Score=195.21 Aligned_cols=324 Identities=13% Similarity=0.090 Sum_probs=202.7
Q ss_pred ccCCCCCCCCcCCHHH---HhccCCc-----cCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcc
Q 004816 68 ITAPYGSWKSPLTADV---VSGASKR-----LGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAV 138 (729)
Q Consensus 68 ~~~~~~~~~~~lt~e~---i~~~~~~-----~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~ 138 (729)
..++|++|-.+.|-+. +...... +..++||| |++++|+..+ ++...||.++.. +++.++++.....
T Consensus 7 ~~~~~~~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~---~g~~~l~~~d~~-~~~~~~l~~~~~~- 81 (396)
T 3c5m_A 7 ITLNFETFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDF---DGNRNYYLLNLE-TQQAVQLTEGKGD- 81 (396)
T ss_dssp EECCEEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT---TSSCEEEEEETT-TTEEEECCCSSCB-
T ss_pred cchhhheeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEec---CCCceEEEEECC-CCcEEEeecCCCC-
Confidence 3456777766655332 2222122 67899999 9999998763 344567777766 3355666543210
Q ss_pred cccccccCCceEEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeec-------------------ceec
Q 004816 139 RTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYAD-------------------GIFD 199 (729)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~-------------------~~~S 199 (729)
......|+++++.|+|.... ++||++++++ ++.++++.... ....+ +.|+
T Consensus 82 -----~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~--~~~~~~~~~~~---~~~~~g~~l~~~~~~~~~~~~~~~~~~s 150 (396)
T 3c5m_A 82 -----NTFGGFISTDERAFFYVKNE-LNLMKVDLET--LEEQVIYTVDE---EWKGYGTWVANSDCTKLVGIEILKRDWQ 150 (396)
T ss_dssp -----CTTTCEECTTSSEEEEEETT-TEEEEEETTT--CCEEEEEECCT---TEEEEEEEEECTTSSEEEEEEEEGGGCC
T ss_pred -----ccccceECCCCCEEEEEEcC-CcEEEEECCC--CCcEEEEeccc---ccCCCCCEEEeccCCccccccccccccC
Confidence 11224566777788888754 4799999998 77777775321 11111 4567
Q ss_pred CCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeeeeeeCC-CCCeEEEEEecCCCCCCCCcEEEEEEec
Q 004816 200 PRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYIS 278 (729)
Q Consensus 200 PdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~~~SP-DG~~la~~~~~~~~~~~~~~~l~~~d~~ 278 (729)
|||+.+++...... .....||++|+++++.+.++........+.||| ||++|+|+.. ... .....+||++|++
T Consensus 151 pdg~~~~~~~~~~~----~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~-~~~-~~~~~~l~~~d~~ 224 (396)
T 3c5m_A 151 PLTSWEKFAEFYHT----NPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHE-GPH-DLVDARMWLVNED 224 (396)
T ss_dssp CCCSHHHHHHHHHT----CCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEEC-SCS-SSCSCCCEEEETT
T ss_pred CCCcceeeeeeccC----CCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEec-CCC-CCCCceEEEEECC
Confidence 77766554431000 113689999999999988887666778899999 8999999973 211 0112579999987
Q ss_pred CCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceE--EEEEEcCCCeEEEeeccCccccCCcccccCcc
Q 004816 279 ENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWN--LHKWIESNNEVLAIYSLDAEFSRPLWVFGINS 355 (729)
Q Consensus 279 ~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~--l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~ 355 (729)
+++. ..+..... . ..+..+.|+|||+ |+|.+.. .+... |+++|+++++.+.+...... . +.|++.
T Consensus 225 -~~~~--~~l~~~~~-~--~~~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~g~~~~l~~~~~~-~-~~~s~~--- 292 (396)
T 3c5m_A 225 -GSNV--RKIKEHAE-G--ESCTHEFWIPDGSAMAYVSYF-KGQTDRVIYKANPETLENEEVMVMPPC-S-HLMSNF--- 292 (396)
T ss_dssp -SCCC--EESSCCCT-T--EEEEEEEECTTSSCEEEEEEE-TTTCCEEEEEECTTTCCEEEEEECCSE-E-EEEECS---
T ss_pred -CCce--eEeeccCC-C--ccccceEECCCCCEEEEEecC-CCCccceEEEEECCCCCeEEeeeCCCC-C-CCccCC---
Confidence 5543 22222211 1 3456789999999 8888776 45544 99999999988877643321 1 444430
Q ss_pred eeeeeecCCCCEEEEEEE-------------ECCeEEEEEEECCCCceEeeccCCcc-----------eE--EeeeeCCE
Q 004816 356 YEIIQSHGEKNLIACSYR-------------QNGRSYLGILDDFGHSLSLLDIPFTD-----------ID--NITLGNDC 409 (729)
Q Consensus 356 ~~~l~~~~~~~~l~~~s~-------------~~g~~~ly~~d~~~g~~~~lt~~~~~-----------v~--~~~~~~~~ 409 (729)
+++.+++... ..+...||++++++++.++|+..... .. .++++++.
T Consensus 293 --------dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 364 (396)
T 3c5m_A 293 --------DGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDG 364 (396)
T ss_dssp --------SSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSE
T ss_pred --------CCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCe
Confidence 3444444321 13557899999999988888765431 22 22455555
Q ss_pred EEEEEeCCCCCceEEEEEcCCCcce
Q 004816 410 LFVEGASGVEPSSVAKVTLDDHKLK 434 (729)
Q Consensus 410 ~~~~~~~~~~~~~ly~~d~~~~~~~ 434 (729)
++ +.+......+||++++++++.+
T Consensus 365 l~-~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 365 VL-FTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp EE-EEECTTSSCEEEEEECCTTCC-
T ss_pred EE-EEecCCCCceEEEEEEcccccc
Confidence 54 4455556678999999888753
No 79
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.82 E-value=4.2e-19 Score=191.38 Aligned_cols=231 Identities=13% Similarity=0.041 Sum_probs=159.4
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCc
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 536 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g 536 (729)
..+.+.++. +|..+.++++.|.+ .++.|+||++||..+.. ...+....+.++++||.|+++|+||.|...
T Consensus 167 ~~~~v~i~~--~g~~l~~~~~~P~~-------~~~~P~vv~~hG~~~~~-~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~ 236 (415)
T 3mve_A 167 IIKQLEIPF--EKGKITAHLHLTNT-------DKPHPVVIVSAGLDSLQ-TDMWRLFRDHLAKHDIAMLTVDMPSVGYSS 236 (415)
T ss_dssp EEEEEEEEC--SSSEEEEEEEESCS-------SSCEEEEEEECCTTSCG-GGGHHHHHHTTGGGTCEEEEECCTTSGGGT
T ss_pred CeEEEEEEE--CCEEEEEEEEecCC-------CCCCCEEEEECCCCccH-HHHHHHHHHHHHhCCCEEEEECCCCCCCCC
Confidence 356777877 68899999999965 45679999999974332 233445567888999999999999765432
Q ss_pred hhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHH----h
Q 004816 537 REFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSML----R 611 (729)
Q Consensus 537 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~----~ 611 (729)
. .....+ .......+++++.....+|.++|+|+|||+||++++.++. +|++++++|+.+|+.+.... .
T Consensus 237 ~---~~~~~~----~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~ 309 (415)
T 3mve_A 237 K---YPLTED----YSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKL 309 (415)
T ss_dssp T---SCCCSC----TTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHH
T ss_pred C---CCCCCC----HHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHH
Confidence 1 111111 1233467888888887788899999999999999999998 89999999999998653211 1
Q ss_pred hhcchhhhhhhhhhcC----Chh----hhhhcCcccc----cCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEE
Q 004816 612 AETHKFESRYIDNLVG----SEK----DYYEKSPINF----VDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVA 679 (729)
Q Consensus 612 ~~~~~~~~~~~~~~~~----~~~----~~~~~sp~~~----~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 679 (729)
..........+....+ ... .+...++... +.++++|+|+++|++|.++|++++..+.+ .+.+++
T Consensus 310 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~----~~~~~~ 385 (415)
T 3mve_A 310 QQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAF----FSTYGK 385 (415)
T ss_dssp TTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHH----TBTTCE
T ss_pred HHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHH----hCCCce
Confidence 1111111111111111 111 1222333222 46788999999999999999998887766 455779
Q ss_pred EEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 680 LVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 680 ~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
++++++..|. ....+.++.+.+||.++|.
T Consensus 386 l~~i~g~~~h----~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 386 AKKISSKTIT----QGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp EEEECCCSHH----HHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCCcc----cchHHHHHHHHHHHHHHhc
Confidence 9999983221 2556788999999999885
No 80
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.82 E-value=1.2e-19 Score=188.47 Aligned_cols=228 Identities=19% Similarity=0.243 Sum_probs=159.0
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCC-ccccchhhhHHHh-hCCcEEEEecCCCCCC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWT-SRGWAFVDVNYGGSTG 534 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~la-~~G~~v~~~d~rGs~g 534 (729)
..+.+.++.. +| .+.+++| +. .++.|+||++||+++.. ....+..+...|+ ..||.|+.+||||.+.
T Consensus 55 ~~~~~~i~~~-~g-~i~~~~y-~~--------~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~ 123 (311)
T 1jji_A 55 RVEDRTIKGR-NG-DIRVRVY-QQ--------KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPE 123 (311)
T ss_dssp EEEEEEEEET-TE-EEEEEEE-ES--------SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTT
T ss_pred eEEEEEecCC-CC-cEEEEEE-cC--------CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCC
Confidence 4678888886 66 8888888 42 24569999999986422 2234566778888 5799999999998775
Q ss_pred CchhHHHhhccCCCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHh-CCCc----ceEEEEeccccC
Q 004816 535 YGREFRERLLGRWGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALA-FRDT----FKAGASLYGVAD 606 (729)
Q Consensus 535 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~----~~a~v~~~~~~d 606 (729)
+... ...+|+.++++|+.+. ..+|+++|+|+|+|+||++++.++. ++++ ++++|+.+|..+
T Consensus 124 ~~~p-----------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 192 (311)
T 1jji_A 124 HKFP-----------AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVN 192 (311)
T ss_dssp SCTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCC
T ss_pred CCCC-----------CcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccC
Confidence 4321 2368899999999875 2467789999999999999998886 5544 999999999887
Q ss_pred hhHHhhhcch-------h----hhhhhhhhcCCh--hhhhhcCccc-ccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHH
Q 004816 607 LSMLRAETHK-------F----ESRYIDNLVGSE--KDYYEKSPIN-FVDKFSCPIILFQGLEDKVVPPDQARKIYKALK 672 (729)
Q Consensus 607 ~~~~~~~~~~-------~----~~~~~~~~~~~~--~~~~~~sp~~-~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~ 672 (729)
.......... . ...+.....+.. ......+|+. .+..+ +|+|+++|++|.++ .++.++++.|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~--~~~~~~~~~l~ 269 (311)
T 1jji_A 193 FVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENL-PPALIITAEYDPLR--DEGEVFGQMLR 269 (311)
T ss_dssp SSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHHH
T ss_pred CCCCCccHHHhcCCCccCCHHHHHHHHHHhCCCCccCCCcccCcccccccCC-ChheEEEcCcCcch--HHHHHHHHHHH
Confidence 5321110000 0 011111111111 1111234443 22222 69999999999987 47888999999
Q ss_pred hCCCCEEEEEECCCCcccCC----cccHHHHHHHHHHHHHH
Q 004816 673 ENGLPVALVEYEGEQHGFRK----AENIKFTLEQQMVFFAR 709 (729)
Q Consensus 673 ~~g~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~~fl~~ 709 (729)
++|++++++++++++|+|.. .+...++++.+.+||++
T Consensus 270 ~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 270 RAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 99999999999999998753 24456788888899864
No 81
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.82 E-value=4.5e-19 Score=196.33 Aligned_cols=251 Identities=12% Similarity=0.112 Sum_probs=174.2
Q ss_pred CCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccc-----------------cc----hhh
Q 004816 455 FSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-----------------IL----NLS 513 (729)
Q Consensus 455 ~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~-----------------~~----~~~ 513 (729)
+...+.+.++.. ||.+|.++++.|++ .++.|+||+.||........ .+ ...
T Consensus 38 ~~~~~~v~i~~~-DG~~L~a~l~~P~~-------~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 109 (560)
T 3iii_A 38 MIMEKDGTVEMR-DGEKLYINIFRPNK-------DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPD 109 (560)
T ss_dssp EEEEEEEEEECT-TSCEEEEEEEECSS-------SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCC
T ss_pred eEEEEEEEEECC-CCcEEEEEEEecCC-------CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCC
Confidence 334577889998 99999999999976 46789999999864331100 01 123
Q ss_pred hHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CC
Q 004816 514 IQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FR 592 (729)
Q Consensus 514 ~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~ 592 (729)
+++|+++||+|+.+|+||+++++..+. .++..+.+|+.++++||.+++..| .||+++|+|+||++++.++. +|
T Consensus 110 ~~~la~~Gy~vv~~D~RG~G~S~G~~~-----~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p 183 (560)
T 3iii_A 110 PGFWVPNDYVVVKVALRGSDKSKGVLS-----PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNP 183 (560)
T ss_dssp HHHHGGGTCEEEEEECTTSTTCCSCBC-----TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCC
T ss_pred HHHHHhCCCEEEEEcCCCCCCCCCccc-----cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCC
Confidence 689999999999999999998776543 244467899999999999988777 89999999999999999988 88
Q ss_pred CcceEEEEeccccChhHH-hh-hc-c--hh---hhh--------------hhhhhcC--Ch-hhhhhcCcccccCCCCCC
Q 004816 593 DTFKAGASLYGVADLSML-RA-ET-H--KF---ESR--------------YIDNLVG--SE-KDYYEKSPINFVDKFSCP 647 (729)
Q Consensus 593 ~~~~a~v~~~~~~d~~~~-~~-~~-~--~~---~~~--------------~~~~~~~--~~-~~~~~~sp~~~~~~i~~P 647 (729)
+.++|+|+.+|+.|+..- .. .. . .+ ... +...... .. +.|...++ .+++|++|
T Consensus 184 ~~l~aiv~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~--~~~~I~vP 261 (560)
T 3iii_A 184 PHLKAMIPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQV--PLSQIKTP 261 (560)
T ss_dssp TTEEEEEEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBC--CGGGCCSC
T ss_pred CceEEEEecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCC--chhhCCCC
Confidence 999999999999987531 10 00 0 00 000 0000000 11 22333443 67899999
Q ss_pred EEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhCCCCCC-CCCCceecc
Q 004816 648 IILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVGHFDVA-DEIIPIKID 726 (729)
Q Consensus 648 vL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~~~~-~~~~~~~~~ 726 (729)
+|+++|..|..+...++.+.+++|+..+ ..+++-+ .+|.-. .......+.+++||+.+|++.... ...|++.+.
T Consensus 262 vl~v~Gw~D~~~~~~g~l~~y~~l~~~~--k~l~ih~-~~~~~~--~~~~~~~~~~~~wfD~~LkG~~ng~~~~p~V~~~ 336 (560)
T 3iii_A 262 LLTCASWSTQGLHNRGSFEGFKQAASEE--KWLYVHG-RKEWES--YYARENLERQKSFFDFYLKEENNDWKDTPHVIYE 336 (560)
T ss_dssp EEEEEEGGGTTTTHHHHHHHHHHCCCSS--EEEEEES-SCHHHH--HHSHHHHHHHHHHHHHHTSCCCCSGGGSCSEEEE
T ss_pred EEEeCCcCCCcccchhHHHHHHhccccC--cEEEECC-CCCcCc--ccChhHHHHHHHHHHHHhCCCCCCCCCCCcEEEE
Confidence 9999999997666777888888776543 2444322 233210 011245678899999999977654 446777653
No 82
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.82 E-value=2.3e-19 Score=187.73 Aligned_cols=218 Identities=12% Similarity=0.111 Sum_probs=150.1
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCC-ccccchhhhHHHh-hCCcEEEEecCCCCCCCchhHHHhhccCCCc
Q 004816 472 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWT-SRGWAFVDVNYGGSTGYGREFRERLLGRWGI 549 (729)
Q Consensus 472 l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~la-~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~ 549 (729)
+.++++.|.+ ++.|+||++|||++.. ....+...+..|+ +.||.|+++||||+++....
T Consensus 84 ~~~~~~~p~~--------~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~~----------- 144 (326)
T 3d7r_A 84 MQVFRFNFRH--------QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHID----------- 144 (326)
T ss_dssp EEEEEEESTT--------CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCHH-----------
T ss_pred EEEEEEeeCC--------CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCch-----------
Confidence 5556677753 3458999999986432 2334455666676 45999999999987653221
Q ss_pred ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCc----ceEEEEeccccChhHHhhhcc-hh------
Q 004816 550 VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDT----FKAGASLYGVADLSMLRAETH-KF------ 617 (729)
Q Consensus 550 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~----~~a~v~~~~~~d~~~~~~~~~-~~------ 617 (729)
..++|+.++++++.++ ++.++++|+|||+||++|+.++. ++++ ++++|+.+|+.+......... ..
T Consensus 145 ~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~ 222 (326)
T 3d7r_A 145 DTFQAIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAV 222 (326)
T ss_dssp HHHHHHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhcccCcc
Confidence 2368999999999887 67889999999999999999987 6555 999999999877542111100 00
Q ss_pred -h----hhhhhhhcCC-hhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccC
Q 004816 618 -E----SRYIDNLVGS-EKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFR 691 (729)
Q Consensus 618 -~----~~~~~~~~~~-~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~ 691 (729)
. ..+.....+. .......+|+...-...+|+|+++|++|. +..++.++++.+++.+.+++++++|+++|.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~--~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 300 (326)
T 3d7r_A 223 LSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREM--THPDMKLFEQMMLQHHQYIEFYDYPKMVHDFP 300 (326)
T ss_dssp CCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTST--THHHHHHHHHHHHHTTCCEEEEEETTCCTTGG
T ss_pred cCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCccc--chHHHHHHHHHHHHCCCcEEEEEeCCCccccc
Confidence 0 0000000010 00111223433211223699999999996 45678899999999999999999999999875
Q ss_pred C--cccHHHHHHHHHHHHHHHhC
Q 004816 692 K--AENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 692 ~--~~~~~~~~~~~~~fl~~~l~ 712 (729)
. .+...++.+.+.+|+++++.
T Consensus 301 ~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 301 IYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp GSSSHHHHHHHHHHHHHHTSCCC
T ss_pred ccCCHHHHHHHHHHHHHHHHHhh
Confidence 4 35667888999999988765
No 83
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.82 E-value=1.7e-19 Score=175.69 Aligned_cols=184 Identities=11% Similarity=0.075 Sum_probs=134.7
Q ss_pred CCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHH-----h-hccCC----CcccHHHHHHH
Q 004816 489 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRE-----R-LLGRW----GIVDVNDCCSC 558 (729)
Q Consensus 489 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~-----~-~~~~~----~~~~~~D~~~~ 558 (729)
.++.| ||++||.++. ...|...++.|+ .||.|+++|.++..+.+..|.. . ..+.. -....+++.+.
T Consensus 14 ~~~~p-vv~lHG~g~~--~~~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~ 89 (209)
T 3og9_A 14 KDLAP-LLLLHSTGGD--EHQLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDE 89 (209)
T ss_dssp TTSCC-EEEECCTTCC--TTTTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHHH
T ss_pred CCCCC-EEEEeCCCCC--HHHHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHHH
Confidence 34568 9999997433 345667777777 7999999995532211111111 0 00000 01235666677
Q ss_pred HHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCc
Q 004816 559 ATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSP 637 (729)
Q Consensus 559 ~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 637 (729)
++.+.++..+|+++++|+|||+||++++.++. +|++++++|+.+|......
T Consensus 90 ~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------------------------- 141 (209)
T 3og9_A 90 VSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF---------------------------- 141 (209)
T ss_dssp HHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC----------------------------
T ss_pred HHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc----------------------------
Confidence 77777776788899999999999999999987 9999999999998654211
Q ss_pred ccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 638 INFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 638 ~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
.......++|+|++||++|.++|+++++++++.|++.+.++++++++ .+|.+. .+..+.+.+||+++
T Consensus 142 ~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~-----~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 142 EQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLT-----QEEVLAAKKWLTET 208 (209)
T ss_dssp CCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCC-----HHHHHHHHHHHHHH
T ss_pred cccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCC-----HHHHHHHHHHHHhh
Confidence 01123457899999999999999999999999999999999999998 699874 34567888999874
No 84
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.81 E-value=1.6e-18 Score=179.14 Aligned_cols=236 Identities=14% Similarity=0.164 Sum_probs=152.7
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCC-CCCc
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS-TGYG 536 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs-~g~g 536 (729)
++...+... +|.+++++.+.|.... .++.|+||++||.+. ....|...++.|+++||.|+++|+||. |.+.
T Consensus 7 ~~~~~i~~~-dG~~l~~~~~~p~~~~-----~~~~~~VvllHG~g~--~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~ 78 (305)
T 1tht_A 7 TIAHVLRVN-NGQELHVWETPPKENV-----PFKNNTILIASGFAR--RMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSS 78 (305)
T ss_dssp CEEEEEEET-TTEEEEEEEECCCTTS-----CCCSCEEEEECTTCG--GGGGGHHHHHHHHTTTCCEEEECCCBCC----
T ss_pred ceEEEEEcC-CCCEEEEEEecCcccC-----CCCCCEEEEecCCcc--CchHHHHHHHHHHHCCCEEEEeeCCCCCCCCC
Confidence 456667776 8999999998875410 234588999999743 345677888999999999999999986 3332
Q ss_pred hhHHHhhccCCCc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHhCCCcceEEEEeccccChhHHhhhcc
Q 004816 537 REFRERLLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVADLSMLRAETH 615 (729)
Q Consensus 537 ~~~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~~~~~a~v~~~~~~d~~~~~~~~~ 615 (729)
.. ...+.. ...+|+.++++++.+. +.++++++||||||.+++.++..| +++++|+.++..++........
T Consensus 79 ~~-----~~~~~~~~~~~D~~~~~~~l~~~---~~~~~~lvGhSmGG~iA~~~A~~~-~v~~lvl~~~~~~~~~~~~~~~ 149 (305)
T 1tht_A 79 GS-----IDEFTMTTGKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISDL-ELSFLITAVGVVNLRDTLEKAL 149 (305)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHTTTS-CCSEEEEESCCSCHHHHHHHHH
T ss_pred Cc-----ccceehHHHHHHHHHHHHHHHhC---CCCceEEEEECHHHHHHHHHhCcc-CcCEEEEecCchhHHHHHHHHh
Confidence 11 111221 1257888899998753 347899999999999999999876 8999999888765432211000
Q ss_pred h--hhhhhhhhh------cC---Chhhhh----h------cCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhC
Q 004816 616 K--FESRYIDNL------VG---SEKDYY----E------KSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKEN 674 (729)
Q Consensus 616 ~--~~~~~~~~~------~~---~~~~~~----~------~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~ 674 (729)
. ......... .. ....+. . .+....+.++++|+|+++|++|..+|++.+.++++.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~- 228 (305)
T 1tht_A 150 GFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRT- 228 (305)
T ss_dssp SSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTT-
T ss_pred hhhhhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCC-
Confidence 0 000000000 00 000010 0 012345778999999999999999999988887766532
Q ss_pred CCCEEEEEECCCCcccCC-cccHHHHHHHHHHHHHHHhC
Q 004816 675 GLPVALVEYEGEQHGFRK-AENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 675 g~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~fl~~~l~ 712 (729)
.+++++++|++||.+.. ++...++++.+.+|......
T Consensus 229 -~~~~l~~i~~agH~~~e~p~~~~~fl~~~~~~~~~~~~ 266 (305)
T 1tht_A 229 -GHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAIAMDG 266 (305)
T ss_dssp -CCEEEEEETTCCSCTTSSHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCcEEEEeCCCCCchhhCchHHHHHHHHHHHHHHHhCc
Confidence 25799999999998742 22233455555566555443
No 85
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.81 E-value=3.9e-19 Score=180.17 Aligned_cols=207 Identities=18% Similarity=0.231 Sum_probs=147.5
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
.|+||++||.+.. ...|...++.|+++||.|+++|+||.|......... . -....+|+.++++++..+ .+
T Consensus 40 ~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~---~-~~~~~~d~~~~i~~l~~~----~~ 109 (270)
T 3rm3_A 40 PVGVLLVHGFTGT--PHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERT---T-FHDWVASVEEGYGWLKQR----CQ 109 (270)
T ss_dssp SEEEEEECCTTCC--GGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTC---C-HHHHHHHHHHHHHHHHTT----CS
T ss_pred CeEEEEECCCCCC--hhHHHHHHHHHHHCCCEEEEeCCCCCCCCccccccC---C-HHHHHHHHHHHHHHHHhh----CC
Confidence 4899999997543 345778889999999999999999876554322111 1 112378889999998776 57
Q ss_pred cEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchh--hhhhhhhhcC---C------------hhhhh
Q 004816 572 RLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKF--ESRYIDNLVG---S------------EKDYY 633 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~--~~~~~~~~~~---~------------~~~~~ 633 (729)
+++++|||+||++++.++. +|+ ++++|+.+|..+........... ...+...... . ...+.
T Consensus 110 ~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (270)
T 3rm3_A 110 TIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLL 188 (270)
T ss_dssp EEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEEEHHHHH
T ss_pred cEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcccccChhHHH
Confidence 9999999999999999998 888 99999999987665433211100 0000000000 0 00000
Q ss_pred -----hcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 634 -----EKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 634 -----~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
..+....+.++++|+|+++|++|.++|++.+.++++.+.. .+++++++|+++|.+.......+..+.+.+||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 266 (270)
T 3rm3_A 189 QLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISS--TEKEIVRLRNSYHVATLDYDQPMIIERSLEFFA 266 (270)
T ss_dssp HHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCC--SSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCC--CcceEEEeCCCCcccccCccHHHHHHHHHHHHH
Confidence 0011234677899999999999999999999999888764 367999999999997665556788999999999
Q ss_pred HHh
Q 004816 709 RVV 711 (729)
Q Consensus 709 ~~l 711 (729)
++.
T Consensus 267 ~~~ 269 (270)
T 3rm3_A 267 KHA 269 (270)
T ss_dssp HHC
T ss_pred hcC
Confidence 874
No 86
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.81 E-value=1.4e-18 Score=179.84 Aligned_cols=233 Identities=12% Similarity=0.114 Sum_probs=151.0
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCc
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 536 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g 536 (729)
..+.+.+.. +|..+...++.+.. ..+..|+||++||.+.+ ...|...+..|+++||.|+++|+||.|...
T Consensus 19 ~~~~~~~~~--~~~~~~~~~~~~~~------~~~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 88 (315)
T 4f0j_A 19 PVHYLDFTS--QGQPLSMAYLDVAP------KKANGRTILLMHGKNFC--AGTWERTIDVLADAGYRVIAVDQVGFCKSS 88 (315)
T ss_dssp CCEEEEEEE--TTEEEEEEEEEECC------SSCCSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSC
T ss_pred cceeEEEec--CCCCeeEEEeecCC------CCCCCCeEEEEcCCCCc--chHHHHHHHHHHHCCCeEEEeecCCCCCCC
Confidence 456677766 57666655554432 13456899999998544 345778889999999999999999876543
Q ss_pred hhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhh---
Q 004816 537 REFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRA--- 612 (729)
Q Consensus 537 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~--- 612 (729)
.. .......+|+.+.+..+++. ++.++++|+|||+||++++.++. +|++++++|+.+|.........
T Consensus 89 ~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 159 (315)
T 4f0j_A 89 KP-------AHYQYSFQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVP 159 (315)
T ss_dssp CC-------SSCCCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCC
T ss_pred CC-------CccccCHHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccch
Confidence 22 11123467777777766665 34569999999999999999998 9999999999998642111000
Q ss_pred ---------hc----chhhhhhhhhhc--------------------CC-------------hhhhhhcCcccccCCCCC
Q 004816 613 ---------ET----HKFESRYIDNLV--------------------GS-------------EKDYYEKSPINFVDKFSC 646 (729)
Q Consensus 613 ---------~~----~~~~~~~~~~~~--------------------~~-------------~~~~~~~sp~~~~~~i~~ 646 (729)
.. ......+..... .. .......+....+.++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (315)
T 4f0j_A 160 WRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQM 239 (315)
T ss_dssp CCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCS
T ss_pred hhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCC
Confidence 00 000000000000 00 001112234456788999
Q ss_pred CEEEEEeCCCCCCChHHH------------HHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 647 PIILFQGLEDKVVPPDQA------------RKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 647 PvL~i~G~~D~~vp~~~~------------~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
|+|+++|++|.++|.++. .+..+.+.+...++++++++++||.+. .++..++.+.+.+||++
T Consensus 240 P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 240 PTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQ-IQAPERFHQALLEGLQT 313 (315)
T ss_dssp CEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHH-HHSHHHHHHHHHHHHCC
T ss_pred CeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchh-hhCHHHHHHHHHHHhcc
Confidence 999999999999994332 334444444445789999999999753 34556777777777754
No 87
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.81 E-value=6.3e-19 Score=182.29 Aligned_cols=244 Identities=13% Similarity=0.150 Sum_probs=163.0
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchh---hhHHHhhCCcEEEEecCCCCC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL---SIQYWTSRGWAFVDVNYGGST 533 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~~~~la~~G~~v~~~d~rGs~ 533 (729)
+.+.+++.+...+..+.++ +.|. .+++|+|+++||++.......|.. ..+.+++.||.|+++|++++.
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~--------~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~ 78 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSG--------GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSS 78 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECC--------STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTC
T ss_pred eEEEEEEECccCCCceEEE-ECCC--------CCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCc
Confidence 4577788776457778777 4443 246799999999853222233332 346677889999999998764
Q ss_pred CCchhHHHhhc--cCCCcccHHHH--HHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChh
Q 004816 534 GYGREFRERLL--GRWGIVDVNDC--CSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLS 608 (729)
Q Consensus 534 g~g~~~~~~~~--~~~~~~~~~D~--~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~ 608 (729)
+|.. +..... +..+....++. ..++.++.++..+++++++|+|+||||++|+.++. +|++|+++++++|..++.
T Consensus 79 ~~~~-~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 157 (304)
T 1sfr_A 79 FYSD-WYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPS 157 (304)
T ss_dssp TTCB-CSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTT
T ss_pred cccc-cCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcc
Confidence 4421 100000 00001223332 23444554433467789999999999999999988 999999999999987654
Q ss_pred HHh-hh-cc----hhhhhhhhhhcC--ChhhhhhcCcccccCCC---CCCEEEEEeCCCC--------------CCChHH
Q 004816 609 MLR-AE-TH----KFESRYIDNLVG--SEKDYYEKSPINFVDKF---SCPIILFQGLEDK--------------VVPPDQ 663 (729)
Q Consensus 609 ~~~-~~-~~----~~~~~~~~~~~~--~~~~~~~~sp~~~~~~i---~~PvL~i~G~~D~--------------~vp~~~ 663 (729)
... .. .. ..........++ ....+...+|...+.++ ++|+++++|++|. .++.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~~~ 237 (304)
T 1sfr_A 158 QAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTS 237 (304)
T ss_dssp STTHHHHHHHHHHHTTSCCHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHH
T ss_pred ccchhhhhhHhhhhccccchHHhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHHHH
Confidence 210 00 00 000000111222 12456677887666555 5899999999998 668899
Q ss_pred HHHHHHHHHhCC-CCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhCC
Q 004816 664 ARKIYKALKENG-LPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVGH 713 (729)
Q Consensus 664 ~~~~~~~l~~~g-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~ 713 (729)
+++++++|+++| +++++++|++++|.+ ..+...+..++.||.++|+-
T Consensus 238 ~~~~~~~L~~~G~~~v~~~~~~~g~H~~---~~w~~~l~~~l~~l~~~l~~ 285 (304)
T 1sfr_A 238 NIKFQDAYNAGGGHNGVFDFPDSGTHSW---EYWGAQLNAMKPDLQRALGA 285 (304)
T ss_dssp HHHHHHHHHHTTCCSEEEECCSCCCSSH---HHHHHHHHHTHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCceEEEecCCCccCH---HHHHHHHHHHHHHHHHhcCC
Confidence 999999999999 999999998779975 34567778899999999984
No 88
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.81 E-value=3.1e-18 Score=165.91 Aligned_cols=195 Identities=15% Similarity=0.105 Sum_probs=147.7
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchh--hhHHHhhCCcEEEEecCCCCCCC-
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL--SIQYWTSRGWAFVDVNYGGSTGY- 535 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~--~~~~la~~G~~v~~~d~rGs~g~- 535 (729)
+...+.. +|.++++++|.|.+ +.|+||++||++... ..|.. .++.|+++||.|+.+|+||.+..
T Consensus 5 ~~~~~~~--~g~~l~~~~~~~~~---------~~~~vv~~hG~~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~ 71 (207)
T 3bdi_A 5 QEEFIDV--NGTRVFQRKMVTDS---------NRRSIALFHGYSFTS--MDWDKADLFNNYSKIGYNVYAPDYPGFGRSA 71 (207)
T ss_dssp EEEEEEE--TTEEEEEEEECCTT---------CCEEEEEECCTTCCG--GGGGGGTHHHHHHTTTEEEEEECCTTSTTSC
T ss_pred eeEEEee--CCcEEEEEEEeccC---------CCCeEEEECCCCCCc--cccchHHHHHHHHhCCCeEEEEcCCcccccC
Confidence 4444444 79999999998854 358999999985443 45666 88899999999999999976543
Q ss_pred --chhHHHhhccCCCcc-cHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHh
Q 004816 536 --GREFRERLLGRWGIV-DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLR 611 (729)
Q Consensus 536 --g~~~~~~~~~~~~~~-~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~ 611 (729)
... . ... +.+++.+.+..++++. +.++++++|||+||.+++.++. +|++++++++.+|..... +
T Consensus 72 ~~~~~-----~---~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~-~- 139 (207)
T 3bdi_A 72 SSEKY-----G---IDRGDLKHAAEFIRDYLKAN--GVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES-L- 139 (207)
T ss_dssp CCTTT-----C---CTTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG-G-
T ss_pred cccCC-----C---CCcchHHHHHHHHHHHHHHc--CCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc-h-
Confidence 211 1 112 4677777777776653 4579999999999999999988 899999999999873221 0
Q ss_pred hhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccC
Q 004816 612 AETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFR 691 (729)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~ 691 (729)
...+.++++|+|+++|++|..++++.+.++.+.+. +++++++++++|.+.
T Consensus 140 --------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~ 189 (207)
T 3bdi_A 140 --------------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIIS----GSRLEIVEGSGHPVY 189 (207)
T ss_dssp --------------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHST----TCEEEEETTCCSCHH
T ss_pred --------------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhcC----CceEEEeCCCCCCcc
Confidence 12345678999999999999999999988888773 568999999999854
Q ss_pred CcccHHHHHHHHHHHHHH
Q 004816 692 KAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 692 ~~~~~~~~~~~~~~fl~~ 709 (729)
. +...+..+.+.+|+++
T Consensus 190 ~-~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 190 I-EKPEEFVRITVDFLRN 206 (207)
T ss_dssp H-HSHHHHHHHHHHHHHT
T ss_pred c-cCHHHHHHHHHHHHhh
Confidence 3 3355677778888764
No 89
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.81 E-value=1.6e-19 Score=202.88 Aligned_cols=251 Identities=16% Similarity=0.129 Sum_probs=176.2
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcc-ccchhhh-HHHhhCCcEEEEecCCCCCC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR-GILNLSI-QYWTSRGWAFVDVNYGGSTG 534 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~~~-~~la~~G~~v~~~d~rGs~g 534 (729)
..+.+.++.. ||..|.+.++.|.+ .++.|+||+.||....... ..|...+ ++|+++||+|+.+|+||+++
T Consensus 8 ~~~~v~i~~~-DG~~L~~~~~~P~~-------~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~ 79 (587)
T 3i2k_A 8 VASNVMVPMR-DGVRLAVDLYRPDA-------DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFA 79 (587)
T ss_dssp EEEEEEEECT-TSCEEEEEEEEECC-------SSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTT
T ss_pred EEEEEEEECC-CCCEEEEEEEECCC-------CCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCC
Confidence 3467889998 99999999999975 3568999999876332211 1232234 88999999999999999988
Q ss_pred CchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccc-cChhHHh-
Q 004816 535 YGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGV-ADLSMLR- 611 (729)
Q Consensus 535 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~-~d~~~~~- 611 (729)
++..+.. + ..+.+|+.++++||.++...+ .+|+++|+||||++++.++. +++.++++|+.++. .|+..-.
T Consensus 80 S~g~~~~-----~-~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~~~~ 152 (587)
T 3i2k_A 80 SEGEFVP-----H-VDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWY 152 (587)
T ss_dssp CCSCCCT-----T-TTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCS
T ss_pred CCCcccc-----c-cchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccccccee
Confidence 7755432 1 246899999999999887665 79999999999999999998 79999999999988 6542100
Q ss_pred -hhc--c-----hhh--------------------------------hhhh------------------hhh-cC---Ch
Q 004816 612 -AET--H-----KFE--------------------------------SRYI------------------DNL-VG---SE 629 (729)
Q Consensus 612 -~~~--~-----~~~--------------------------------~~~~------------------~~~-~~---~~ 629 (729)
... . .+. ..++ ... +. ..
T Consensus 153 ~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 232 (587)
T 3i2k_A 153 GPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDND 232 (587)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCCSCC
T ss_pred ecCCccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCCCCC
Confidence 000 0 000 0000 000 11 12
Q ss_pred hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCC---------ccc---HH
Q 004816 630 KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRK---------AEN---IK 697 (729)
Q Consensus 630 ~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~---------~~~---~~ 697 (729)
+.|...++...+++|++|+|+++|..|..+ ..+.+++++|+..++ ..+++-|. .|.... +.. ..
T Consensus 233 ~yw~~~s~~~~l~~I~vPvL~v~Gw~D~~~--~~~~~~~~~l~~~~~-~~L~iGPw-~H~~~~~~~g~~~~g~~~~~~~~ 308 (587)
T 3i2k_A 233 ESWQSISLFERLGGLATPALITAGWYDGFV--GESLRTFVAVKDNAD-ARLVVGPW-SHSNLTGRNADRKFGIAATYPIQ 308 (587)
T ss_dssp HHHHTTCCHHHHTTCCCCEEEEEEEECTTH--HHHHHHHHHHTTTSC-EEEEEEEE-ETTBCSSEETTEECCGGGSCCHH
T ss_pred hHHhcCChhhhhccCCCCEEEEccCCCccc--hHHHHHHHHHhhcCC-CEEEECCc-cccCccccCCCcccCCccccccc
Confidence 335566777789999999999999999764 568889999987764 36666664 364211 111 12
Q ss_pred HHHHHHHHHHHHHhCCCCCC-CCCCceecc
Q 004816 698 FTLEQQMVFFARVVGHFDVA-DEIIPIKID 726 (729)
Q Consensus 698 ~~~~~~~~fl~~~l~~~~~~-~~~~~~~~~ 726 (729)
+..+.+++||+++|++.+.. ...|++.+.
T Consensus 309 ~~~~~~~~wFD~~Lkg~~ng~~~~p~v~~~ 338 (587)
T 3i2k_A 309 EATTMHKAFFDRHLRGETDALAGVPKVRLF 338 (587)
T ss_dssp HHHHHHHHHHHHHHSCCTTTTTTCCSEEEE
T ss_pred hhhHHHHHHHHHHhcCCCCCCCCCCCEEEE
Confidence 44488999999999977654 456777654
No 90
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.81 E-value=2.8e-19 Score=177.10 Aligned_cols=203 Identities=16% Similarity=0.143 Sum_probs=145.5
Q ss_pred CCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhh-------ccCCCcccHHHHHHHHHHHH
Q 004816 491 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERL-------LGRWGIVDVNDCCSCATFLV 563 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~-------~~~~~~~~~~D~~~~~~~l~ 563 (729)
+.|+||++||.+.. ...|...+..|+++||.|+++|+||.+.......... ....-....+|+.++++++.
T Consensus 23 ~~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 100 (238)
T 1ufo_A 23 PKALLLALHGLQGS--KEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAE 100 (238)
T ss_dssp CCEEEEEECCTTCC--HHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEECCCccc--chHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998543 3345667788889999999999998665432110000 00000123678888999988
Q ss_pred hCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccC
Q 004816 564 GSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVD 642 (729)
Q Consensus 564 ~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~ 642 (729)
+.+. ++++++|||+||.+++.++. +|+.++++++.++....... ........ ....+...++...+.
T Consensus 101 ~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~ 168 (238)
T 1ufo_A 101 RRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLP-QGQVVEDP--------GVLALYQAPPATRGE 168 (238)
T ss_dssp HHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCC-TTCCCCCH--------HHHHHHHSCGGGCGG
T ss_pred hccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhh-hhhccCCc--------ccchhhcCChhhhhh
Confidence 7643 79999999999999999998 88888888877664322110 00000000 023344456666677
Q ss_pred CC-CCCEEEEEeCCCCCCChHHHHHHHHHHH-hCCC-CEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 643 KF-SCPIILFQGLEDKVVPPDQARKIYKALK-ENGL-PVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 643 ~i-~~PvL~i~G~~D~~vp~~~~~~~~~~l~-~~g~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
++ ++|+|+++|++|..+|++.+.++++.++ ..|. +++++++++++|.+.. +..+.+.+|+.++++
T Consensus 169 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-----~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 169 AYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTP-----LMARVGLAFLEHWLE 236 (238)
T ss_dssp GGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCH-----HHHHHHHHHHHHHHH
T ss_pred hccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHH-----HHHHHHHHHHHHHHh
Confidence 77 8999999999999999999999999999 8887 8999999999998642 456778899998875
No 91
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.80 E-value=5.9e-19 Score=188.03 Aligned_cols=246 Identities=16% Similarity=0.108 Sum_probs=157.6
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcccc----chhhhHHHhhCCcEEEEecCCCC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI----LNLSIQYWTSRGWAFVDVNYGGS 532 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~----~~~~~~~la~~G~~v~~~d~rGs 532 (729)
..+...+.+. ||..+.++.+.|.... ..+.++.|+||++||.+++...+. +..++..|+++||.|+++|+||.
T Consensus 26 ~~~~~~~~~~-dG~~l~~~~~~~~~~~--~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~ 102 (377)
T 1k8q_A 26 PAEEYEVVTE-DGYILGIDRIPYGRKN--SENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp CCEEEEEECT-TSEEEEEEEECSCSSC--CTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred CceEEEeEcC-CCCEEEEEEecCCCCC--ccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCC
Confidence 4577888887 9999999888764310 000135689999999865543322 22345588999999999999987
Q ss_pred CCCchhHHH-hhcc---CCCccc-HH-HHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCC---cceEEEEec
Q 004816 533 TGYGREFRE-RLLG---RWGIVD-VN-DCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRD---TFKAGASLY 602 (729)
Q Consensus 533 ~g~g~~~~~-~~~~---~~~~~~-~~-D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~---~~~a~v~~~ 602 (729)
|.+...... .... .+...+ .+ |+.++++++++.. +.++++++|||+||.+++.++. +|+ +++++|+.+
T Consensus 103 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~ 180 (377)
T 1k8q_A 103 TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALA 180 (377)
T ss_dssp TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEES
T ss_pred CCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeC
Confidence 654331000 0000 111111 34 8888999887763 3478999999999999999988 888 899999999
Q ss_pred cccChhHHhh---------------hc------c--hhhhhh-----------------h----------------hhhc
Q 004816 603 GVADLSMLRA---------------ET------H--KFESRY-----------------I----------------DNLV 626 (729)
Q Consensus 603 ~~~d~~~~~~---------------~~------~--~~~~~~-----------------~----------------~~~~ 626 (729)
|......... .. . ...... . ....
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (377)
T 1k8q_A 181 PVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYL 260 (377)
T ss_dssp CCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHH
T ss_pred CchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHh
Confidence 8653211000 00 0 000000 0 0000
Q ss_pred ----CC-----------------------------hhhhhhc-CcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHH
Q 004816 627 ----GS-----------------------------EKDYYEK-SPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALK 672 (729)
Q Consensus 627 ----~~-----------------------------~~~~~~~-sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~ 672 (729)
.. ...|... .+...+.++++|+|+++|++|.++|++.+.++++.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 340 (377)
T 1k8q_A 261 SHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLP 340 (377)
T ss_dssp TTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCT
T ss_pred ccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCc
Confidence 00 0000000 1223477889999999999999999999888887765
Q ss_pred hCCCCEEEEEECCCCcccCC--cccHHHHHHHHHHHHHHH
Q 004816 673 ENGLPVALVEYEGEQHGFRK--AENIKFTLEQQMVFFARV 710 (729)
Q Consensus 673 ~~g~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~fl~~~ 710 (729)
.. .++++++++||.... .+...++.+.+.+||+++
T Consensus 341 ~~---~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 341 NL---IYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp TE---EEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred Cc---ccEEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 32 148999999997542 456778889999999753
No 92
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.80 E-value=8.3e-19 Score=179.01 Aligned_cols=239 Identities=13% Similarity=0.143 Sum_probs=161.2
Q ss_pred CCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchh---hhHHHhhCCcEEEEecCCCC
Q 004816 456 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL---SIQYWTSRGWAFVDVNYGGS 532 (729)
Q Consensus 456 ~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~~~~la~~G~~v~~~d~rGs 532 (729)
.+.+.+++.+...|..+.++ +.|.+ .|+||++||++.......|.. ..+.+++.||.|+.+|++++
T Consensus 9 ~~~~~~~~~S~~~~~~~~~~-~~P~~----------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~ 77 (280)
T 1r88_A 9 APYENLMVPSPSMGRDIPVA-FLAGG----------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAY 77 (280)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS----------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTT
T ss_pred CCEEEEEEECcccCCcceEE-EeCCC----------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCC
Confidence 35678888876468888888 66743 279999999853222233322 45677888999999999875
Q ss_pred CCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHh
Q 004816 533 TGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLR 611 (729)
Q Consensus 533 ~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~ 611 (729)
+++.. +.......+.....+ .++.++.++..+++++++|+|+||||++|+.++. +|++|+++++.+|..++....
T Consensus 78 ~~~~~-~~~~~~~~~~~~~~~---~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~ 153 (280)
T 1r88_A 78 SMYTN-WEQDGSKQWDTFLSA---ELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTT 153 (280)
T ss_dssp STTSB-CSSCTTCBHHHHHHT---HHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHH
T ss_pred CccCC-CCCCCCCcHHHHHHH---HHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCcc
Confidence 54321 110001111111122 3344444434567789999999999999999988 999999999999988764321
Q ss_pred hhc--c----hhhhhhhhhhcCCh--hhhhhcCcccccCCC---CCCEEEEE----eCCCCC-------CChHHHHHHHH
Q 004816 612 AET--H----KFESRYIDNLVGSE--KDYYEKSPINFVDKF---SCPIILFQ----GLEDKV-------VPPDQARKIYK 669 (729)
Q Consensus 612 ~~~--~----~~~~~~~~~~~~~~--~~~~~~sp~~~~~~i---~~PvL~i~----G~~D~~-------vp~~~~~~~~~ 669 (729)
... . ..........++.+ ..+...+|+.+++++ ++|+++.| |++|.. +++++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~~~ 233 (280)
T 1r88_A 154 TNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYN 233 (280)
T ss_dssp HHHHHHHHHHHHHCCCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHH
T ss_pred chhhHHHHhhhccccchhhhcCCCchhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHHHH
Confidence 000 0 00000011122222 356667887766655 57999999 999983 58899999999
Q ss_pred HHHhCC-CCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 670 ALKENG-LPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 670 ~l~~~g-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
+|+++| +++++.++++++|.+ ..+...+...+.|+.+-|+
T Consensus 234 ~L~~~g~~~~~~~~~~~g~H~~---~~w~~~l~~~l~~~~~~~~ 274 (280)
T 1r88_A 234 QYRSVGGHNGHFDFPASGDNGW---GSWAPQLGAMSGDIVGAIR 274 (280)
T ss_dssp HHHHTTCCSEEEECCSSCCSSH---HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCcceEEEecCCCCcCh---hHHHHHHHHHHHHHHHHHh
Confidence 999999 999999998889976 3456677777888887775
No 93
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.80 E-value=2.8e-18 Score=180.87 Aligned_cols=300 Identities=10% Similarity=0.051 Sum_probs=194.4
Q ss_pred CCcCCHHHHhccCCccCceEEcCCCcEEEEeecCC---CCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEE
Q 004816 76 KSPLTADVVSGASKRLGGTAVDGHGRLIWLESRPT---EAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRI 152 (729)
Q Consensus 76 ~~~lt~e~i~~~~~~~~~~~~~pg~~~~~~~~~~~---~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (729)
++++++|+++.. ..+.+|+++ |++++|+....+ +.....||.++..+ ++.+.+ . ......|++
T Consensus 3 ~~~~~~~~l~~~-~~~~~~~~d-G~~i~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~~l---~--------~~~~~~~Sp 68 (347)
T 2gop_A 3 SIEWNEKTFAKF-AYLSDPRTK-GELVAYVLTKANLKDNKYENTIVIENLKN-NARRFI---E--------NATMPRISP 68 (347)
T ss_dssp -------CCCCS-CEEEEEEEE-TTEEEEEEEEEETTTTEEEEEEEEEETTT-CCEEEE---E--------SCEEEEECT
T ss_pred cccCCcccceee-EEcccceEC-CcEEEEEEeecCcccCCccceEEEEeCCC-CceEEc---c--------cCCCeEECC
Confidence 356788888877 677888885 999999865432 22356788877663 344444 1 111234666
Q ss_pred ECCEEEEEECCC--C--cEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCC-------------
Q 004816 153 FGDTVIFSNYKD--Q--RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD------------- 215 (729)
Q Consensus 153 ~~~~i~~~~~~~--~--~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~------------- 215 (729)
+++.|+|..... + +||++++++ ++.++++.. .. +..+.|||||++|+|...+....
T Consensus 69 Dg~~la~~~~~~~~~~~~l~~~~~~~--g~~~~l~~~----~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 69 DGKKIAFMRANEEKKVSEIWVADLET--LSSKKILEA----KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp TSSEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEE----SE-EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred CCCEEEEEEeccCCCcceEEEEECCC--CceEEEEcC----CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 677898887543 2 699999998 888888865 24 78899999999999987531100
Q ss_pred -----CCCcceEEEEEEcCCCce-EEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCC--CCCcEEEEEEecCCCCeeeeE
Q 004816 216 -----ALNSTTEIVAIALNGQNI-QVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMP--WDKAELWVGYISENGDVYKRV 287 (729)
Q Consensus 216 -----~~~~~~~l~~~dl~~g~~-~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~--~~~~~l~~~d~~~~g~~~~~~ 287 (729)
......+||++++++++. ++|+. . ....+.||||| |+|+.......+ ....+||++| . ++.. .
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d-~--~~~~--~ 212 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE-D--GKEE--K 212 (347)
T ss_dssp --------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE-T--TEEE--E
T ss_pred cCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC-C--CceE--E
Confidence 001146899999999988 78876 3 66788999999 777764332211 1145799888 3 5542 2
Q ss_pred EecCCCCCccccccCceeCCCCc-EEEEEecCC----CceEEEEEEcCCCeEEEeecc-CccccC-CcccccCcceeeee
Q 004816 288 CVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKN----GFWNLHKWIESNNEVLAIYSL-DAEFSR-PLWVFGINSYEIIQ 360 (729)
Q Consensus 288 ~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~----g~~~l~~~d~~~g~~~~l~~~-~~~~~~-~~w~~~~~~~~~l~ 360 (729)
+... . . ...+||||+ |+|.+.... ....|+++| +++.+.++.. +..+.. +.|+
T Consensus 213 l~~~-~----~---~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s---------- 272 (347)
T 2gop_A 213 MFEK-V----S---FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD---------- 272 (347)
T ss_dssp EEEE-E----S---EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET----------
T ss_pred eccC-c----c---eeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc----------
Confidence 3222 1 1 123499999 888876521 246899998 6777777643 222222 3332
Q ss_pred ecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccCCcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcceeee
Q 004816 361 SHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 361 ~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt 437 (729)
+ + +++.+..++..+|| ++ + ++.+.+..+...+..+.... .+++..++...+.+||.++ ++.++||
T Consensus 273 ---d-g-~~~~~~~~~~~~l~-~~-~-g~~~~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~---g~~~~lt 337 (347)
T 2gop_A 273 ---G-K-VYFTLFEEGSVNLY-IW-D-GEIKPIAKGRHWIMGFDVDE-IVVYLKETATRLRELFTWD---GEEKQLT 337 (347)
T ss_dssp ---T-E-EEEEEEETTEEEEE-EE-S-SSEEEEECSSSEEEEEEESS-SEEEEEECSSSCCEEEEES---SSEEECC
T ss_pred ---C-c-EEEEEecCCcEEEE-Ec-C-CceEEEecCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC---CcEEEec
Confidence 3 3 88888899999999 98 4 56677766666677663333 6788888888888999987 5555544
No 94
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.80 E-value=6.5e-18 Score=196.24 Aligned_cols=308 Identities=11% Similarity=0.067 Sum_probs=196.2
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCC--cccCCCC-C-------cccccccccCCceEEEEC-CEE
Q 004816 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEP--SDITPKE-Y-------AVRTTAQEYGGGAFRIFG-DTV 157 (729)
Q Consensus 89 ~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~--~~l~~~~-~-------~~~~~~~~~~~~~~~~~~-~~i 157 (729)
+++.++.|+ |+.+++... ++ . + ++.. +|+. +.++... . ....+........+++++ +.+
T Consensus 26 ~~~~~~~w~-g~~~~~~~~----~~-i-~--~d~~-tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~ 95 (706)
T 2z3z_A 26 EYVVGLQWM-GDNYVFIEG----DD-L-V--FNKA-NGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLV 95 (706)
T ss_dssp --CTTCEEE-TTEEEEEET----TE-E-E--EEC--------CEEEEHHHHHTTC-----------CCCEEEEETTTTEE
T ss_pred ccCCCCcCc-CCeEEEEeC----Cc-E-E--EECC-CCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeE
Confidence 356778999 887776542 23 3 4 4444 2344 4443211 0 000111123445555654 467
Q ss_pred EEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCC-----Cc
Q 004816 158 IFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-----QN 232 (729)
Q Consensus 158 ~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~-----g~ 232 (729)
++.. ++.|+++|+.+ ++.++++.. ......++|||||++|+|+.+ .+||++++++ ++
T Consensus 96 ~~~~--~~~i~~~d~~~--~~~~~l~~~----~~~~~~~~~SpdG~~la~~~~----------~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 96 VLFT--QGGLVGFDMLA--RKVTYLFDT----NEETASLDFSPVGDRVAYVRN----------HNLYIARGGKLGEGMSR 157 (706)
T ss_dssp EEEE--TTEEEEEETTT--TEEEEEECC----TTCCTTCEECTTSSEEEEEET----------TEEEEEECBCTTSCCCC
T ss_pred EEEE--CCEEEEEECCC--CceEEccCC----cccccCCcCCCCCCEEEEEEC----------CeEEEEecCcccccCCC
Confidence 7774 47899999998 777777765 234578999999999999743 4699999999 88
Q ss_pred eEEeeeCCCe---------------eeeeeeCCCCCeEEEEEecCCCC-------------------------CCCCcEE
Q 004816 233 IQVLVSGSDF---------------YAFPRMDPRGERMAWIEWHHPNM-------------------------PWDKAEL 272 (729)
Q Consensus 233 ~~~lt~~~~~---------------~~~~~~SPDG~~la~~~~~~~~~-------------------------~~~~~~l 272 (729)
.++++..... ...++|||||++|+|.+.+.... .....+|
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 8888754332 36789999999999998553321 1134679
Q ss_pred EEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEec-CCCceEEEEEEcCCC-eEEEeeccCccccCCcc
Q 004816 273 WVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDR-KNGFWNLHKWIESNN-EVLAIYSLDAEFSRPLW 349 (729)
Q Consensus 273 ~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~-~~g~~~l~~~d~~~g-~~~~l~~~~~~~~~~~w 349 (729)
+++|++ +++...+......+ ..+..+.|||||+ |++.+.. ......|+++|++++ +.+.+..+. ...|
T Consensus 238 ~~~d~~-~~~~~~~~~~~~~~----~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~----~~~~ 308 (706)
T 2z3z_A 238 GIYHLA-TGKTVYLQTGEPKE----KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVET----DKHY 308 (706)
T ss_dssp EEEETT-TTEEEECCCCSCTT----CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEE----CSSC
T ss_pred EEEECC-CCceEeeccCCCCc----eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEcc----CCCe
Confidence 999998 66642221111222 4567899999999 7776544 234568999999998 666665322 1222
Q ss_pred cccCcceeeeeecCC--CCEEEEEEEECCeEEEEEEECCCCceEeeccCCcceEE-e-eeeCCEEEEEEeCCCCC--ceE
Q 004816 350 VFGINSYEIIQSHGE--KNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDN-I-TLGNDCLFVEGASGVEP--SSV 423 (729)
Q Consensus 350 ~~~~~~~~~l~~~~~--~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~~~~v~~-~-~~~~~~~~~~~~~~~~~--~~l 423 (729)
......+.|. . ++.+++.++++|..+||.++.+++..+.|+.+.+.+.. + ..+++..+++.++.+.+ ..|
T Consensus 309 ~~~~~~~~~s----p~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l 384 (706)
T 2z3z_A 309 VEPLHPLTFL----PGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHF 384 (706)
T ss_dssp CCCCSCCEEC----TTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEE
T ss_pred ECccCCceee----cCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEE
Confidence 2111233443 3 56678888888999999999888888999888777765 3 33344444444455543 469
Q ss_pred EEEEcCCCcceeee
Q 004816 424 AKVTLDDHKLKAVD 437 (729)
Q Consensus 424 y~~d~~~~~~~~lt 437 (729)
|.+++++++.++|+
T Consensus 385 ~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 385 YCIDIKGGKTKDLT 398 (706)
T ss_dssp EEEETTCCCCEESC
T ss_pred EEEEcCCCCceecc
Confidence 99999888877665
No 95
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.80 E-value=8.8e-19 Score=184.97 Aligned_cols=251 Identities=17% Similarity=0.152 Sum_probs=161.9
Q ss_pred CCCCcEEEEeecc-CCC--eEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcc-ccc-----hhhhHHHh-hCCcE
Q 004816 454 YFSLPELIEFPTE-VPG--QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR-GIL-----NLSIQYWT-SRGWA 523 (729)
Q Consensus 454 ~~~~~~~~~~~~~-~dG--~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~-~~~-----~~~~~~la-~~G~~ 523 (729)
...+..++.|.+. .+| ..+.++++.|.+ +.++.|+|++.||....... +.+ ...+..|+ ++||+
T Consensus 39 ~~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~------~~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~ 112 (377)
T 4ezi_A 39 YDLQLYKINYKTQSPDGNLTIASGLVAMPIH------PVGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYM 112 (377)
T ss_dssp CCEEEEEEEEEEECTTSCEEEEEEEEEEESS------CSSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCE
T ss_pred CCcEEEEEEEEEECCCCCEEEEEEEEEECCC------CCCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcE
Confidence 3345677888776 134 458899999976 23568999999998632211 111 12456678 99999
Q ss_pred EEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhC-CCCCCCcEEEEEcChHHHHHHHHHh-CC----C-cce
Q 004816 524 FVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGS-GKADEKRLCITGGSAGGYTTLAALA-FR----D-TFK 596 (729)
Q Consensus 524 v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~-~~----~-~~~ 596 (729)
|+++||||.|+++..............++.|...++..+... +..+.+||+++|||+||+++++++. +| + .+.
T Consensus 113 Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~ 192 (377)
T 4ezi_A 113 TVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVS 192 (377)
T ss_dssp EEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCC
T ss_pred EEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceE
Confidence 999999998876531110000000112244555544444443 3335689999999999999999886 33 3 689
Q ss_pred EEEEeccccChhHHhhhcch-------hhhhh--------------hhhhcC--------------------------Ch
Q 004816 597 AGASLYGVADLSMLRAETHK-------FESRY--------------IDNLVG--------------------------SE 629 (729)
Q Consensus 597 a~v~~~~~~d~~~~~~~~~~-------~~~~~--------------~~~~~~--------------------------~~ 629 (729)
++++.+++.|+......... ....| +...+. +.
T Consensus 193 g~~~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (377)
T 4ezi_A 193 AVAPGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDP 272 (377)
T ss_dssp EEEEESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSG
T ss_pred EEEecCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCH
Confidence 99999998887643221110 00000 000000 00
Q ss_pred -----hhhhh-----cCc-cc--------ccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECC--CCc
Q 004816 630 -----KDYYE-----KSP-IN--------FVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEG--EQH 688 (729)
Q Consensus 630 -----~~~~~-----~sp-~~--------~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~--~gH 688 (729)
..+.. .+| +. .-.++++|+|++||++|.+||++++.+++++++++|. ++++++++ .+|
T Consensus 273 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H 351 (377)
T 4ezi_A 273 LLIFQPKFSNGIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDH 351 (377)
T ss_dssp GGGBCHHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCT
T ss_pred HHHhchhhhhhcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCc
Confidence 00000 112 10 0125678999999999999999999999999999999 99999999 899
Q ss_pred ccCCcccHHHHHHHHHHHHHHHhCCCC
Q 004816 689 GFRKAENIKFTLEQQMVFFARVVGHFD 715 (729)
Q Consensus 689 ~~~~~~~~~~~~~~~~~fl~~~l~~~~ 715 (729)
... .......+++||+++++.+.
T Consensus 352 ~~~----~~~~~~~~~~wl~~~~~~~~ 374 (377)
T 4ezi_A 352 VQA----HPFVLKEQVDFFKQFERQEA 374 (377)
T ss_dssp TTT----HHHHHHHHHHHHHHHHTSSC
T ss_pred cCh----HHHHHHHHHHHHHHhhcchh
Confidence 753 34677889999999998443
No 96
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.79 E-value=7.2e-19 Score=165.88 Aligned_cols=173 Identities=10% Similarity=0.076 Sum_probs=130.3
Q ss_pred CCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCC
Q 004816 490 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKAD 569 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 569 (729)
++.|+||++||...+...+.+....+.|+++||.|+.+|+||.+.... . .......+++..+++++.+.. +
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~---~----~~~~~~~~~~~~~~~~~~~~~--~ 72 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRD---L----GQLGDVRGRLQRLLEIARAAT--E 72 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGG---G----CTTCCHHHHHHHHHHHHHHHH--T
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCC---C----CCCCCHHHHHHHHHHHHHhcC--C
Confidence 456899999998655444445578889999999999999997543221 1 011112455566677776653 3
Q ss_pred CCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCE
Q 004816 570 EKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPI 648 (729)
Q Consensus 570 ~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~Pv 648 (729)
.++++++|||+||.+++.++. +| ++++|+.+|..+...+. ...++++|+
T Consensus 73 ~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~~----------------------------~~~~~~~P~ 122 (176)
T 2qjw_A 73 KGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPLP----------------------------ALDAAAVPI 122 (176)
T ss_dssp TSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTBC----------------------------CCCCCSSCE
T ss_pred CCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccccC----------------------------cccccCCCE
Confidence 579999999999999999998 66 99999999876643110 045678999
Q ss_pred EEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 649 ILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 649 L~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
|+++|++|..+|++++.++++.+ +++++++ +++|.+. +...+..+.+.+|+++
T Consensus 123 l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~-~~~H~~~--~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 123 SIVHAWHDELIPAADVIAWAQAR-----SARLLLV-DDGHRLG--AHVQAASRAFAELLQS 175 (176)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHH-----TCEEEEE-SSCTTCT--TCHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCccCHHHHHHHHHhC-----CceEEEe-CCCcccc--ccHHHHHHHHHHHHHh
Confidence 99999999999999999999887 3488888 8999873 5667788888888864
No 97
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.79 E-value=2.6e-18 Score=168.01 Aligned_cols=190 Identities=17% Similarity=0.152 Sum_probs=136.7
Q ss_pred CCCCCEEEEEcCCCCCCccccchhhhHHHhh--CCcEEEEecCCCC-----CCCc-hhHHHh-hcc---CCCc----ccH
Q 004816 489 EEKPPLLVKSHGGPTSEARGILNLSIQYWTS--RGWAFVDVNYGGS-----TGYG-REFRER-LLG---RWGI----VDV 552 (729)
Q Consensus 489 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~--~G~~v~~~d~rGs-----~g~g-~~~~~~-~~~---~~~~----~~~ 552 (729)
.++.|+||++||.+.. ...|...++.|++ +||.|+++|++|. .|++ ..|.+. ..+ .... ...
T Consensus 11 ~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~ 88 (218)
T 1auo_A 11 KPADACVIWLHGLGAD--RYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSA 88 (218)
T ss_dssp SCCSEEEEEECCTTCC--TTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHH
T ss_pred CCCCcEEEEEecCCCC--hhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHHHH
Confidence 4567999999998533 3456778888988 9999999987641 1100 000000 000 0000 114
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh--CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChh
Q 004816 553 NDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA--FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEK 630 (729)
Q Consensus 553 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~--~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 630 (729)
+|+..+++++.+ ..++.++++++|||+||++++.++. +|++++++|+.+|...... +. .
T Consensus 89 ~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~-------~~-----------~ 149 (218)
T 1auo_A 89 KMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG-------DE-----------L 149 (218)
T ss_dssp HHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC-------TT-----------C
T ss_pred HHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCch-------hh-----------h
Confidence 556666666665 3467889999999999999999876 7889999999999866410 00 0
Q ss_pred hhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 631 DYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 631 ~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
. .....+++|+|+++|++|.++|++.++++++.++..|.++++++++ ++|.+.. +..+.+.+||.++
T Consensus 150 ~-------~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~-----~~~~~~~~~l~~~ 216 (218)
T 1auo_A 150 E-------LSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLP-----QEIHDIGAWLAAR 216 (218)
T ss_dssp C-------CCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCH-----HHHHHHHHHHHHH
T ss_pred h-------hhhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCH-----HHHHHHHHHHHHH
Confidence 0 0113457899999999999999999999999999999899999999 9998642 4567889999988
Q ss_pred hC
Q 004816 711 VG 712 (729)
Q Consensus 711 l~ 712 (729)
|+
T Consensus 217 l~ 218 (218)
T 1auo_A 217 LG 218 (218)
T ss_dssp HC
T ss_pred hC
Confidence 74
No 98
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.79 E-value=2.2e-18 Score=171.40 Aligned_cols=194 Identities=15% Similarity=0.146 Sum_probs=135.1
Q ss_pred CCCCCEEEEEcCCCCCCccccchhhhHHHhhC-----CcEEEEecCCCC------CCCchhHHHhh-cc---CCCcccHH
Q 004816 489 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSR-----GWAFVDVNYGGS------TGYGREFRERL-LG---RWGIVDVN 553 (729)
Q Consensus 489 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~-----G~~v~~~d~rGs------~g~g~~~~~~~-~~---~~~~~~~~ 553 (729)
.++.|+||++||.++. ...|..+...|+.+ ||.|+.+|.++. ++.+..|.... .. ......++
T Consensus 20 ~~~~p~vv~lHG~g~~--~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 97 (239)
T 3u0v_A 20 GRHSASLIFLHGSGDS--GQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESID 97 (239)
T ss_dssp SCCCEEEEEECCTTCC--HHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHH
T ss_pred CCCCcEEEEEecCCCc--hhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHH
Confidence 3467999999997433 33455566676654 799999997642 11112221100 00 00011233
Q ss_pred HHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCCh
Q 004816 554 DCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSE 629 (729)
Q Consensus 554 D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 629 (729)
++...+..+++. ..++.++++|+|||+||++++.++. +|++++++|+.+|..+.......
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~---------------- 161 (239)
T 3u0v_A 98 VMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQ---------------- 161 (239)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHHH----------------
T ss_pred HHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHHH----------------
Confidence 333333333322 3468899999999999999999988 89999999999998764322110
Q ss_pred hhhhhcCcccccCCCCCC-EEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 630 KDYYEKSPINFVDKFSCP-IILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 630 ~~~~~~sp~~~~~~i~~P-vL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
.+ ......+| +|++||++|.++|+++++++++.|++.+.+++++++++++|.+. .+..+.+.+||.
T Consensus 162 -~~-------~~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~ 228 (239)
T 3u0v_A 162 -AL-------QKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS-----KTELDILKLWIL 228 (239)
T ss_dssp -HH-------HHCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HHHHHHHHHHHH
T ss_pred -HH-------HhhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC-----HHHHHHHHHHHH
Confidence 00 01233456 99999999999999999999999999999999999999999876 466788999999
Q ss_pred HHhCC
Q 004816 709 RVVGH 713 (729)
Q Consensus 709 ~~l~~ 713 (729)
+++..
T Consensus 229 ~~l~~ 233 (239)
T 3u0v_A 229 TKLPG 233 (239)
T ss_dssp HHCC-
T ss_pred HhCCC
Confidence 99873
No 99
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.79 E-value=1.7e-17 Score=193.25 Aligned_cols=310 Identities=13% Similarity=0.117 Sum_probs=196.9
Q ss_pred cCceEEcC-CCcEEEEeecCCCC---CceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCc
Q 004816 91 LGGTAVDG-HGRLIWLESRPTEA---GRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQR 166 (729)
Q Consensus 91 ~~~~~~~p-g~~~~~~~~~~~~~---~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 166 (729)
+.++.||| |+.+++........ ....++.++..+ ++.+.+.... ..... .....|+++++.|+|... ++
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~l~~~~-~~~~~---~~~~~~SPdG~~la~~~~--~~ 135 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH-GDPQSLDPPE-VSNAK---LQYAGWGPKGQQLIFIFE--NN 135 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS-CCCEECCCTT-CCSCC---CSBCCBCSSTTCEEEEET--TE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCC-CceEeccCCc-ccccc---ccccEECCCCCEEEEEEC--Ce
Confidence 67899999 88888875432211 113455555552 3445554322 10000 123467788889999875 68
Q ss_pred EEEEeCCCCCCCCeecCCCCCCCc---------------eeeecceecCCCCEEEEEEeccCCC----------------
Q 004816 167 LYKHSIDSKDSSPLPITPDYGEPL---------------VSYADGIFDPRFNRYVTVREDRRQD---------------- 215 (729)
Q Consensus 167 l~~~d~~~~~~~~~~lt~~~~~~~---------------~~~~~~~~SPdG~~l~~~~~~~~~~---------------- 215 (729)
||++++++ ++.++++....... .++..+.|||||++|+|...+....
T Consensus 136 i~~~~~~~--g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (723)
T 1xfd_A 136 IYYCAHVG--KQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTV 213 (723)
T ss_dssp EEEESSSS--SCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCC
T ss_pred EEEEECCC--CceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcc
Confidence 99999998 78888876421100 0125689999999999987653210
Q ss_pred ---------CCCcceEEEEEEcCCCce-EEeeeC------CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecC
Q 004816 216 ---------ALNSTTEIVAIALNGQNI-QVLVSG------SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE 279 (729)
Q Consensus 216 ---------~~~~~~~l~~~dl~~g~~-~~lt~~------~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~ 279 (729)
.......|+++|+++++. ++++.. ......+.|||||+.|++..... . ....|+++|++
T Consensus 214 ~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~---~~~~i~~~d~~- 288 (723)
T 1xfd_A 214 KPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA-Q---NVSILTLCDAT- 288 (723)
T ss_dssp EEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT-S---CEEEEEEEETT-
T ss_pred eeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC-C---CeEEEEEEeCC-
Confidence 001234899999999874 666643 33456789999999887665332 1 35679999998
Q ss_pred CCCeeeeEEecCCCCCcccc-ccCceeCCCCc-EEEE-EecCCC----ceEEEEEE-cCCCe---EEEeeccCccccC-C
Q 004816 280 NGDVYKRVCVAGFDPTIVES-PTEPKWSSKGE-LFFV-TDRKNG----FWNLHKWI-ESNNE---VLAIYSLDAEFSR-P 347 (729)
Q Consensus 280 ~g~~~~~~~~~~~~~~~~~~-~~~~~wspDG~-l~~~-~~~~~g----~~~l~~~d-~~~g~---~~~l~~~~~~~~~-~ 347 (729)
+|+... ++......|... ...+.|||||+ |++. ... .+ ..+||++| ..+++ .+.|+........ +
T Consensus 289 ~g~~~~--~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~ 365 (723)
T 1xfd_A 289 TGVCTK--KHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIP-QGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKIL 365 (723)
T ss_dssp TCCEEE--EEEEECSSCCCCCCCCCEECTTSCSEEEEEEEC-CSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEE
T ss_pred CCcceE--EEEeccCCEEeccCCCceEcCCCCeEEEEEecc-cCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeee
Confidence 777532 222211111111 14789999999 8887 444 55 67899999 56776 6677643333222 3
Q ss_pred cccccCcceeeeeecCCCCEEEEEEEEC--CeEEEEEEECCCC-ceEeeccC---CcceEEe--eeeCCEEEEEEeCCCC
Q 004816 348 LWVFGINSYEIIQSHGEKNLIACSYRQN--GRSYLGILDDFGH-SLSLLDIP---FTDIDNI--TLGNDCLFVEGASGVE 419 (729)
Q Consensus 348 ~w~~~~~~~~~l~~~~~~~~l~~~s~~~--g~~~ly~~d~~~g-~~~~lt~~---~~~v~~~--~~~~~~~~~~~~~~~~ 419 (729)
.|++ +++.|++.+.++ +..+||.++.+++ +.+.|+.. ...+..+ +++++.+++..++++.
T Consensus 366 ~~sp------------dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 433 (723)
T 1xfd_A 366 AYDE------------KGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGV 433 (723)
T ss_dssp EEET------------TTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSS
T ss_pred EEcC------------CCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCC
Confidence 4554 888998888776 7789999998775 55667642 3334333 6777888888888887
Q ss_pred CceEEEEEcCC
Q 004816 420 PSSVAKVTLDD 430 (729)
Q Consensus 420 ~~~ly~~d~~~ 430 (729)
|..++. +...
T Consensus 434 p~~~~~-~~~~ 443 (723)
T 1xfd_A 434 PMVTVH-NTTD 443 (723)
T ss_dssp CCEEEE-ETTT
T ss_pred CeEEEE-ECCC
Confidence 765543 4433
No 100
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.79 E-value=6.1e-19 Score=173.51 Aligned_cols=199 Identities=12% Similarity=0.025 Sum_probs=142.4
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhcc--
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLG-- 545 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~-- 545 (729)
++..+.+.++.|.+ ...|+||++||.++. ...|....+.|++ ||.|+++|.++..+.|..|......
T Consensus 14 ~~~~l~~~~~~~~~--------~~~p~vv~lHG~g~~--~~~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~ 82 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK--------ESRECLFLLHGSGVD--ETTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTR 82 (223)
T ss_dssp CSSSSCEEEESTTS--------SCCCEEEEECCTTBC--TTTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTE
T ss_pred cCCCceEEEeCCCC--------CCCCEEEEEecCCCC--HHHHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCc
Confidence 34556655555533 234899999998443 3456667777765 9999999987632222222111000
Q ss_pred -CC--CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhh
Q 004816 546 -RW--GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRY 621 (729)
Q Consensus 546 -~~--~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~ 621 (729)
.. -....+|+.+.++++.++..+|.++++|+|||+||.+++.++. +|++++++|+.+|......
T Consensus 83 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------ 150 (223)
T 3b5e_A 83 FEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH------------ 150 (223)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc------------
Confidence 00 0112567777788877765678899999999999999999987 9999999999998754310
Q ss_pred hhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHH
Q 004816 622 IDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLE 701 (729)
Q Consensus 622 ~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~ 701 (729)
. .....+++|+|++||++|.++|+++++ +++.++++|.++++++++ ++|.+.. +..+
T Consensus 151 -------~---------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~-----~~~~ 207 (223)
T 3b5e_A 151 -------V---------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGD-----PDAA 207 (223)
T ss_dssp -------C---------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCH-----HHHH
T ss_pred -------c---------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCH-----HHHH
Confidence 0 122346789999999999999999999 999999999999999999 9998742 3456
Q ss_pred HHHHHHHHHhC
Q 004816 702 QQMVFFARVVG 712 (729)
Q Consensus 702 ~~~~fl~~~l~ 712 (729)
.+.+|+.+.+.
T Consensus 208 ~i~~~l~~~~~ 218 (223)
T 3b5e_A 208 IVRQWLAGPIA 218 (223)
T ss_dssp HHHHHHHCC--
T ss_pred HHHHHHHhhhh
Confidence 78889887554
No 101
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.78 E-value=5.3e-18 Score=167.04 Aligned_cols=184 Identities=14% Similarity=0.147 Sum_probs=138.1
Q ss_pred CCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEe--cCCCCCCCchhHHHhhccCCC----cccHHHHHHHHHHHH
Q 004816 490 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDV--NYGGSTGYGREFRERLLGRWG----IVDVNDCCSCATFLV 563 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~--d~rGs~g~g~~~~~~~~~~~~----~~~~~D~~~~~~~l~ 563 (729)
++.|+||++||.+.. ...|...++.|++ ||.|+++ |++|.+.... +.......+. ..+.+++.+.++++.
T Consensus 36 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 111 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGN--ELDLLPLAEIVDS-EASVLSVRGNVLENGMPRF-FRRLAEGIFDEEDLIFRTKELNEFLDEAA 111 (226)
T ss_dssp TTSCEEEEECCTTCC--TTTTHHHHHHHHT-TSCEEEECCSEEETTEEES-SCEEETTEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCC--hhHHHHHHHHhcc-CceEEEecCcccCCcchhh-ccccCccCcChhhHHHHHHHHHHHHHHHH
Confidence 457999999998543 3456777788887 9999999 7776543210 0000000011 112456667777777
Q ss_pred hCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccC
Q 004816 564 GSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVD 642 (729)
Q Consensus 564 ~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~ 642 (729)
++..++.++++++|||+||++++.++. +|++++++|+.+|...... .....
T Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~----------------------------~~~~~ 163 (226)
T 2h1i_A 112 KEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG----------------------------MQLAN 163 (226)
T ss_dssp HHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS----------------------------CCCCC
T ss_pred hhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc----------------------------ccccc
Confidence 777778899999999999999999988 8999999999999864321 01123
Q ss_pred CCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 643 KFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 643 ~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
.+++|+|+++|++|..+|++.+.++++.+++.+.++++ ++++++|.+. .+..+.+.+|+.++|
T Consensus 164 ~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 164 LAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLT-----MGEVEKAKEWYDKAF 226 (226)
T ss_dssp CTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCC-----HHHHHHHHHHHHHHC
T ss_pred ccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC-----HHHHHHHHHHHHHhC
Confidence 45789999999999999999999999999998888888 9999999873 356788899998865
No 102
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.78 E-value=4e-19 Score=171.96 Aligned_cols=183 Identities=16% Similarity=0.070 Sum_probs=116.9
Q ss_pred CEEEEEcCCCCCCccccchhhhHHHhhC--CcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCC
Q 004816 493 PLLVKSHGGPTSEARGILNLSIQYWTSR--GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 570 (729)
Q Consensus 493 P~vv~~hGg~~~~~~~~~~~~~~~la~~--G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 570 (729)
|+||++||...+........+.+++.++ ||.|+++|++|. |.+ ..+.++.++.+ .+.
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~---g~~----------------~~~~l~~~~~~--~~~ 61 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPY---PAE----------------AAEMLESIVMD--KAG 61 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSS---HHH----------------HHHHHHHHHHH--HTT
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCC---HHH----------------HHHHHHHHHHh--cCC
Confidence 7999999964444333334456677665 599999999864 322 22233333332 245
Q ss_pred CcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhc-CCh-hhhhhcCcccccCCCCCC
Q 004816 571 KRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLV-GSE-KDYYEKSPINFVDKFSCP 647 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~sp~~~~~~i~~P 647 (729)
++++|+|+||||++|+.++. ++....+++...+..+.......... ..+..... ... ...........+.++++|
T Consensus 62 ~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 139 (202)
T 4fle_A 62 QSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQ--NPYTGQKYVLESRHIYDLKAMQIEKLESPDL 139 (202)
T ss_dssp SCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEE--CTTTCCEEEECHHHHHHHHTTCCSSCSCGGG
T ss_pred CcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhc--cccccccccchHHHHHHHHhhhhhhhccCce
Confidence 79999999999999999998 88777666555443322111100000 00000000 001 111223444567788899
Q ss_pred EEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 648 IILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 648 vL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
+|++||++|.+||++++.++++ ++++++++|++|.+...+ +.++.+.+||+
T Consensus 140 ~LiihG~~D~~Vp~~~s~~l~~-------~~~l~i~~g~~H~~~~~~---~~~~~I~~FL~ 190 (202)
T 4fle_A 140 LWLLQQTGDEVLDYRQAVAYYT-------PCRQTVESGGNHAFVGFD---HYFSPIVTFLG 190 (202)
T ss_dssp EEEEEETTCSSSCHHHHHHHTT-------TSEEEEESSCCTTCTTGG---GGHHHHHHHHT
T ss_pred EEEEEeCCCCCCCHHHHHHHhh-------CCEEEEECCCCcCCCCHH---HHHHHHHHHHh
Confidence 9999999999999999988763 458999999999986543 56778888886
No 103
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.78 E-value=3e-18 Score=177.32 Aligned_cols=225 Identities=17% Similarity=0.147 Sum_probs=149.7
Q ss_pred EEEee---ccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccc-hhhhHHHhhCCcEEEEecCCCCCCC
Q 004816 460 LIEFP---TEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWTSRGWAFVDVNYGGSTGY 535 (729)
Q Consensus 460 ~~~~~---~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~-~~~~~~la~~G~~v~~~d~rGs~g~ 535 (729)
.+++. .. +|..+.++++.|.+. .++.|+||++||+++.. ..+ ..+.+.++++||.|+++|+|+....
T Consensus 26 ~~~~~~~~~~-~~~~l~~~~~~P~~~------~~~~p~vv~lHG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~~~~~p 96 (304)
T 3d0k_A 26 AIPYLDDDRN-ADRPFTLNTYRPYGY------TPDRPVVVVQHGVLRNG--ADYRDFWIPAADRHKLLIVAPTFSDEIWP 96 (304)
T ss_dssp EEEECC---C-TTCCEEEEEEECTTC------CTTSCEEEEECCTTCCH--HHHHHHTHHHHHHHTCEEEEEECCTTTSC
T ss_pred eEEecccCCC-CCceEEEEEEeCCCC------CCCCcEEEEeCCCCCCH--HHHHHHHHHHHHHCCcEEEEeCCccccCC
Confidence 45565 44 788999999999762 24579999999986543 233 5567888889999999999964210
Q ss_pred chhHHH-------h-hccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCC-cceEEEEec-cc
Q 004816 536 GREFRE-------R-LLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRD-TFKAGASLY-GV 604 (729)
Q Consensus 536 g~~~~~-------~-~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~-~~~a~v~~~-~~ 604 (729)
+..+.. . .........++|+.++++++.++..+|.++|+|+|||+||++++.++. +|+ +++++|+.. |.
T Consensus 97 ~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~ 176 (304)
T 3d0k_A 97 GVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGW 176 (304)
T ss_dssp HHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSS
T ss_pred CccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcc
Confidence 000000 0 000011233578999999999987788999999999999999999988 884 788888665 55
Q ss_pred cChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCC-----------------hHHHHHH
Q 004816 605 ADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVP-----------------PDQARKI 667 (729)
Q Consensus 605 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp-----------------~~~~~~~ 667 (729)
.++..... .+...+.. ...+|......+++|+|++||++|.++. .+.+.++
T Consensus 177 ~~~~~~~~-------~~~~~~~~-----~~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 244 (304)
T 3d0k_A 177 YTLPTFEH-------RFPEGLDG-----VGLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYARARHY 244 (304)
T ss_dssp CCCSSTTS-------BTTTSSBT-----TTCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHHHHHH
T ss_pred cccCCccc-------cCccccCC-----CCCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccHHHHHHHH
Confidence 54432110 00000000 0113333334456899999999998742 3566777
Q ss_pred HHHHH----hCCCC--EEEEEECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 668 YKALK----ENGLP--VALVEYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 668 ~~~l~----~~g~~--~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
++.++ +.|.+ ++++++|++||.+. ...+.+.+||.+..
T Consensus 245 ~~~l~~~a~~~g~~~~~~~~~~pg~gH~~~------~~~~~~~~~~~~~~ 288 (304)
T 3d0k_A 245 YEAGQRAAAQRGLPFGWQLQVVPGIGHDGQ------AMSQVCASLWFDGR 288 (304)
T ss_dssp HHHHHHHHHHHTCCCCCEEEEETTCCSCHH------HHHHHHHHHHHTSS
T ss_pred HHHHHHHHHhcCCCcceEEEEeCCCCCchH------HHHHHHHHHHhhhh
Confidence 77776 66776 99999999999862 45566777776543
No 104
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.78 E-value=9.2e-18 Score=165.39 Aligned_cols=182 Identities=14% Similarity=0.113 Sum_probs=135.7
Q ss_pred CCCCCEEEEEcCCCCCCccccchhhhHHHhh--CCcEEEEecCCCCC----------------CCchhHHHhhccCCCcc
Q 004816 489 EEKPPLLVKSHGGPTSEARGILNLSIQYWTS--RGWAFVDVNYGGST----------------GYGREFRERLLGRWGIV 550 (729)
Q Consensus 489 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~--~G~~v~~~d~rGs~----------------g~g~~~~~~~~~~~~~~ 550 (729)
.++.|+||++||.+.. ...|...++.|++ +||.|+++|++|.+ |+|... .....
T Consensus 21 ~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~------~~~~~ 92 (226)
T 3cn9_A 21 PNADACIIWLHGLGAD--RTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPAR------AIDED 92 (226)
T ss_dssp TTCCEEEEEECCTTCC--GGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTT------CBCHH
T ss_pred CCCCCEEEEEecCCCC--hHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccc------cccch
Confidence 4567999999998543 3456778888887 99999999887421 222110 00111
Q ss_pred c----HHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh--CCCcceEEEEeccccChhHHhhhcchhhhhhhhh
Q 004816 551 D----VNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA--FRDTFKAGASLYGVADLSMLRAETHKFESRYIDN 624 (729)
Q Consensus 551 ~----~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~--~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 624 (729)
. .+++..+++++.+ ..++.++++|+|||+||.+++.++. +|++++++|+.+|..+.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~------------- 158 (226)
T 3cn9_A 93 QLNASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC-------------
T ss_pred hHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh-------------
Confidence 1 4555555565554 3467789999999999999998886 788999999999976543210
Q ss_pred hcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHH
Q 004816 625 LVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQM 704 (729)
Q Consensus 625 ~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 704 (729)
.. ....+++|+|+++|++|.++|++.+.++++.++..|.++++++++ ++|.+. .+..+.+.
T Consensus 159 ---------~~----~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~~~i~ 219 (226)
T 3cn9_A 159 ---------AL----DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVS-----LEEIHDIG 219 (226)
T ss_dssp ---------CC----CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCC-----HHHHHHHH
T ss_pred ---------hh----cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcc-----hhhHHHHH
Confidence 00 124567899999999999999999999999999999899999999 999864 24567889
Q ss_pred HHHHHHh
Q 004816 705 VFFARVV 711 (729)
Q Consensus 705 ~fl~~~l 711 (729)
+||.++|
T Consensus 220 ~~l~~~l 226 (226)
T 3cn9_A 220 AWLRKRL 226 (226)
T ss_dssp HHHHHHC
T ss_pred HHHHhhC
Confidence 9998875
No 105
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.78 E-value=1.2e-18 Score=177.48 Aligned_cols=231 Identities=16% Similarity=0.119 Sum_probs=152.2
Q ss_pred CCCCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHH-HhhCC---cEEEEec
Q 004816 453 SYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQY-WTSRG---WAFVDVN 528 (729)
Q Consensus 453 ~~~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~-la~~G---~~v~~~d 528 (729)
..+...+.+++.+..+|..+.++++.|++.. +.+++|+|+++||++.......+...... .++.| +.|+.+|
T Consensus 13 ~~~~~~~~~~~~s~~~g~~~~~~v~~P~~~~----~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~ 88 (275)
T 2qm0_A 13 IITSNTEQWKMYSKLEGKEYQIHISKPKQPA----PDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVG 88 (275)
T ss_dssp CCCTTEEEEEEECTTTCCEEEEEEECCSSCC----CTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEE
T ss_pred eecCCceEEEEEecCCCCEEEEEEECCCCCC----CCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEEC
Confidence 3455678888888646889999999998733 25678999999997431111111111222 24467 9999999
Q ss_pred CCCCCCCchhHHHhhcc------------------CCC-cccHHHHH--HHHHHHHhCCCCCCCcEEEEEcChHHHHHHH
Q 004816 529 YGGSTGYGREFRERLLG------------------RWG-IVDVNDCC--SCATFLVGSGKADEKRLCITGGSAGGYTTLA 587 (729)
Q Consensus 529 ~rGs~g~g~~~~~~~~~------------------~~~-~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~ 587 (729)
++++..++...+..... ..+ .....+.. .++.++.++..+|+++++|+|||+||++++.
T Consensus 89 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~ 168 (275)
T 2qm0_A 89 YPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALH 168 (275)
T ss_dssp CSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHH
T ss_pred CCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHH
Confidence 99865443211111111 011 11222322 3445566666678899999999999999999
Q ss_pred HHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHH
Q 004816 588 ALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARK 666 (729)
Q Consensus 588 ~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~ 666 (729)
++. +|++|+++++.+|...+..... .. ..+.+.... ......+|++++||+.|..++..++++
T Consensus 169 ~~~~~p~~f~~~~~~s~~~~~~~~~~---------~~----~~~~~~~~~---~~~~~~~~~~l~~G~~D~~~~~~~~~~ 232 (275)
T 2qm0_A 169 ILFTNLNAFQNYFISSPSIWWNNKSV---------LE----KEENLIIEL---NNAKFETGVFLTVGSLEREHMVVGANE 232 (275)
T ss_dssp HHHHCGGGCSEEEEESCCTTHHHHGG---------GG----GTTHHHHHH---HTCSSCEEEEEEEETTSCHHHHHHHHH
T ss_pred HHHhCchhhceeEEeCceeeeChHHH---------HH----HHHHHHhhh---cccCCCceEEEEeCCcccchhhHHHHH
Confidence 988 9999999999999875432110 00 011111110 023456799999999999889999999
Q ss_pred HHHHH---HhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHH
Q 004816 667 IYKAL---KENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFF 707 (729)
Q Consensus 667 ~~~~l---~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl 707 (729)
++++| +++|++++++++|+++|+.. +...+...++||
T Consensus 233 ~~~~L~~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 233 LSERLLQVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp HHHHHHHCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred HHHHHHhcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 99999 56788999999999999642 334445555665
No 106
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.77 E-value=5e-18 Score=169.96 Aligned_cols=204 Identities=17% Similarity=0.218 Sum_probs=132.6
Q ss_pred CEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcc-cHHHHHHHHHHHHhCCCCCCC
Q 004816 493 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIV-DVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 493 P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~-~~~D~~~~~~~l~~~~~~d~~ 571 (729)
|.||++||.+++. ..|...++.|+++||.|+++|+||.|.... . ...+... -.+|+.++++++.+.+ .+
T Consensus 17 ~~vvllHG~~~~~--~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~---~--~~~~~~~~~~~d~~~~~~~l~~~~---~~ 86 (247)
T 1tqh_A 17 RAVLLLHGFTGNS--ADVRMLGRFLESKGYTCHAPIYKGHGVPPE---E--LVHTGPDDWWQDVMNGYEFLKNKG---YE 86 (247)
T ss_dssp CEEEEECCTTCCT--HHHHHHHHHHHHTTCEEEECCCTTSSSCHH---H--HTTCCHHHHHHHHHHHHHHHHHHT---CC
T ss_pred cEEEEECCCCCCh--HHHHHHHHHHHHCCCEEEecccCCCCCCHH---H--hcCCCHHHHHHHHHHHHHHHHHcC---CC
Confidence 6799999975443 446677888989999999999998663321 1 1111111 1456666677776543 36
Q ss_pred cEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccCh---hHHhhhcchhhhhh--------------hhhhcC----Ch
Q 004816 572 RLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADL---SMLRAETHKFESRY--------------IDNLVG----SE 629 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~---~~~~~~~~~~~~~~--------------~~~~~~----~~ 629 (729)
++.|+||||||.+++.++. +| ++++|+.++.... .........+...+ ...... ..
T Consensus 87 ~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (247)
T 1tqh_A 87 KIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTL 164 (247)
T ss_dssp CEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCTTH
T ss_pred eEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhhhhcccCCCHHHH
Confidence 8999999999999999998 77 8888876543321 11000000000000 000000 00
Q ss_pred hhhhh--cCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHH
Q 004816 630 KDYYE--KSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFF 707 (729)
Q Consensus 630 ~~~~~--~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl 707 (729)
..+.. .+....+.++++|+|+++|++|..+|++.++++++.+.. ..++++++|++||.....+...++.+.+.+|+
T Consensus 165 ~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl 242 (247)
T 1tqh_A 165 KALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIES--PVKQIKWYEQSGHVITLDQEKDQLHEDIYAFL 242 (247)
T ss_dssp HHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCC--SSEEEEEETTCCSSGGGSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCC--CceEEEEeCCCceeeccCccHHHHHHHHHHHH
Confidence 00000 122345678999999999999999999999988887753 25799999999998655445678889999999
Q ss_pred HHH
Q 004816 708 ARV 710 (729)
Q Consensus 708 ~~~ 710 (729)
++.
T Consensus 243 ~~~ 245 (247)
T 1tqh_A 243 ESL 245 (247)
T ss_dssp HHS
T ss_pred Hhc
Confidence 763
No 107
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=2e-17 Score=177.06 Aligned_cols=256 Identities=10% Similarity=0.070 Sum_probs=176.9
Q ss_pred ceEEEECCEEEEEECCCC--cEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEE
Q 004816 148 GAFRIFGDTVIFSNYKDQ--RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (729)
Q Consensus 148 ~~~~~~~~~i~~~~~~~~--~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~ 225 (729)
..|+++++.|+|....++ +||++|+++ ++.++++... ......+.|||||++|+|+..+ ..||+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~--g~~~~lt~~~---~~~~~~~~~spdg~~l~~~~~~---------~~l~~ 106 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNT--QVATQLTEGR---GDNTFGGFLSPDDDALFYVKDG---------RNLMR 106 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTT--CEEEECCCSS---CBCSSSCEECTTSSEEEEEETT---------TEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCC--CceEEeeeCC---CCCccceEEcCCCCEEEEEeCC---------CeEEE
Confidence 467788889999987555 799999998 8889998763 2223367899999999999753 47999
Q ss_pred EEcCCCceEEeeeCCCe-eeee--eeCCCCCeEEEEEecCCCC--------------CCCCcEEEEEEecCCCCeeeeEE
Q 004816 226 IALNGQNIQVLVSGSDF-YAFP--RMDPRGERMAWIEWHHPNM--------------PWDKAELWVGYISENGDVYKRVC 288 (729)
Q Consensus 226 ~dl~~g~~~~lt~~~~~-~~~~--~~SPDG~~la~~~~~~~~~--------------~~~~~~l~~~d~~~~g~~~~~~~ 288 (729)
+|+++++.+.+...... .... .++|||+.|+....+.... ......|+++|++ +|+.. .+
T Consensus 107 ~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~g~~~--~l 183 (388)
T 3pe7_A 107 VDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK-TGEST--VI 183 (388)
T ss_dssp EETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT-TCCEE--EE
T ss_pred EECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC-CCceE--Ee
Confidence 99999998888764432 2222 3599999998765322110 0023679999998 77653 33
Q ss_pred ecCCCCCccccccCceeCC-CCc-EEEEEecCC--CceEEEEEEcCCCeEEEeeccCc--cccCCcccccCcceeeeeec
Q 004816 289 VAGFDPTIVESPTEPKWSS-KGE-LFFVTDRKN--GFWNLHKWIESNNEVLAIYSLDA--EFSRPLWVFGINSYEIIQSH 362 (729)
Q Consensus 289 ~~~~~~~~~~~~~~~~wsp-DG~-l~~~~~~~~--g~~~l~~~d~~~g~~~~l~~~~~--~~~~~~w~~~~~~~~~l~~~ 362 (729)
.... ..+..+.||| ||+ |+|...... +..+||.+|+++++.+.|+.... ....+.|++
T Consensus 184 ~~~~-----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp----------- 247 (388)
T 3pe7_A 184 LQEN-----QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVP----------- 247 (388)
T ss_dssp EEES-----SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECT-----------
T ss_pred ecCC-----ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECC-----------
Confidence 3322 3446789999 999 888876411 25689999999888888875431 234466665
Q ss_pred CCCCEEEEEEEECCeE--EEEEEECCCCceEeeccCCcc------e--EEeeeeCCEEEEEEeC-----CCCCceEEEEE
Q 004816 363 GEKNLIACSYRQNGRS--YLGILDDFGHSLSLLDIPFTD------I--DNITLGNDCLFVEGAS-----GVEPSSVAKVT 427 (729)
Q Consensus 363 ~~~~~l~~~s~~~g~~--~ly~~d~~~g~~~~lt~~~~~------v--~~~~~~~~~~~~~~~~-----~~~~~~ly~~d 427 (729)
|++.|++.+.+.+.. .||++|+++++.++++..... . ..++++++.+++.... ......||++|
T Consensus 248 -dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d 326 (388)
T 3pe7_A 248 -DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326 (388)
T ss_dssp -TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEE
T ss_pred -CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEe
Confidence 888898888877765 499999999998877643220 1 1236677766665432 24566899999
Q ss_pred cCCCcceeee
Q 004816 428 LDDHKLKAVD 437 (729)
Q Consensus 428 ~~~~~~~~lt 437 (729)
+++++.++|+
T Consensus 327 ~~~~~~~~l~ 336 (388)
T 3pe7_A 327 MKNGTQHRVA 336 (388)
T ss_dssp TTTTEEEEEE
T ss_pred ccCCceEEec
Confidence 9999877665
No 108
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.77 E-value=2e-17 Score=175.54 Aligned_cols=232 Identities=19% Similarity=0.211 Sum_probs=148.2
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccc-----------cchhhhH---HHhhCCcEEEEecCCC--
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-----------ILNLSIQ---YWTSRGWAFVDVNYGG-- 531 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~-----------~~~~~~~---~la~~G~~v~~~d~rG-- 531 (729)
+|.++++..+.+.+ ..+.|+||++||.+.+.... .|...+. .|++.||.|+++|+||
T Consensus 29 ~g~~l~y~~~g~~~-------~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~ 101 (366)
T 2pl5_A 29 SPVVIAYETYGTLS-------SSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGC 101 (366)
T ss_dssp SSEEEEEEEEECCC-------TTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCS
T ss_pred cCceeeEEeccCcC-------CCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcc
Confidence 56677766665533 22357899999986554421 3444442 4667899999999998
Q ss_pred CCCCchhHHHhh-----ccCCCcccHHHHHHHHHHHHhCCCCCCCcE-EEEEcChHHHHHHHHHh-CCCcceEEEEeccc
Q 004816 532 STGYGREFRERL-----LGRWGIVDVNDCCSCATFLVGSGKADEKRL-CITGGSAGGYTTLAALA-FRDTFKAGASLYGV 604 (729)
Q Consensus 532 s~g~g~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri-~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~ 604 (729)
.|..+....... ...+.....+++.+.+..+++. ++.+++ .|+|||+||.+++.++. +|++++++|+.++.
T Consensus 102 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 179 (366)
T 2pl5_A 102 KGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVES--LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMAST 179 (366)
T ss_dssp SSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCC
T ss_pred cCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHH--cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccC
Confidence 343332100000 0001123466666666666554 245788 89999999999999998 99999999999987
Q ss_pred cChhHHhhh-----------c-------------------------------chhhhhhhhhhcC---------------
Q 004816 605 ADLSMLRAE-----------T-------------------------------HKFESRYIDNLVG--------------- 627 (729)
Q Consensus 605 ~d~~~~~~~-----------~-------------------------------~~~~~~~~~~~~~--------------- 627 (729)
......... . ..+...+......
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (366)
T 2pl5_A 180 AEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLI 259 (366)
T ss_dssp SBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGG
T ss_pred ccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHH
Confidence 543211000 0 0000000000000
Q ss_pred ----------Ch-------hhhhhcC------cccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEE-
Q 004816 628 ----------SE-------KDYYEKS------PINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEY- 683 (729)
Q Consensus 628 ----------~~-------~~~~~~s------p~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~- 683 (729)
.. ..+...+ ....+.++++|+|+++|++|.++|++.+.++++.+...|..++++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (366)
T 2pl5_A 260 YQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQ 339 (366)
T ss_dssp STTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeC
Confidence 00 0011111 11256788999999999999999999999999999987777899999
Q ss_pred CCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 684 EGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 684 ~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
+++||.+.. +...++.+.+.+|+.+
T Consensus 340 ~~~gH~~~~-e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 340 SGEGHDSFL-LKNPKQIEILKGFLEN 364 (366)
T ss_dssp CCBSSGGGG-SCCHHHHHHHHHHHHC
T ss_pred CCCCcchhh-cChhHHHHHHHHHHcc
Confidence 899998644 3446788888888875
No 109
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.77 E-value=8.6e-18 Score=171.64 Aligned_cols=242 Identities=12% Similarity=0.111 Sum_probs=156.7
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchh---hhHHHhhCCcEEEEecCCCCC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL---SIQYWTSRGWAFVDVNYGGST 533 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~~~~la~~G~~v~~~d~rGs~ 533 (729)
+.+.+++.+...+..+.+++ |+. . .|+|+++||.+.......|.. ..+.++++||.|+.+|.+|++
T Consensus 5 ~~~~~~~~s~~~~~~~~v~~--~p~-------~--~~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~ 73 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQF--QGG-------G--PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSS 73 (280)
T ss_dssp CEEEEEEEETTTTEEEEEEE--ECC-------S--SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTC
T ss_pred eEEEEEEECcccCceeEEEE--cCC-------C--CCEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCc
Confidence 34667777664677777664 333 1 258999999853222223332 335677889999999988654
Q ss_pred CCchhHHHhhc-cCCCcccHHHH--HHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhH
Q 004816 534 GYGREFRERLL-GRWGIVDVNDC--CSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSM 609 (729)
Q Consensus 534 g~g~~~~~~~~-~~~~~~~~~D~--~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~ 609 (729)
++......... +.......++. ..++.++.++..+++++++|+|+||||++|+.++. +|++|+++++.+|..++..
T Consensus 74 ~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~ 153 (280)
T 1dqz_A 74 FYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSE 153 (280)
T ss_dssp TTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTS
T ss_pred cccCCCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccC
Confidence 43210000000 00011223332 24444554433467789999999999999999988 9999999999999877543
Q ss_pred Hhh--hcchh---hhh-hhhhhcCC--hhhhhhcCcccccCCC---CCCEEEEEeCCCC--------------CCChHHH
Q 004816 610 LRA--ETHKF---ESR-YIDNLVGS--EKDYYEKSPINFVDKF---SCPIILFQGLEDK--------------VVPPDQA 664 (729)
Q Consensus 610 ~~~--~~~~~---~~~-~~~~~~~~--~~~~~~~sp~~~~~~i---~~PvL~i~G~~D~--------------~vp~~~~ 664 (729)
... ..... ... .....+++ ...+.+.+|..++.++ .+|+++.||+.|. .++.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~ 233 (280)
T 1dqz_A 154 SWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTN 233 (280)
T ss_dssp TTHHHHHHHHHHHTTSCCHHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHH
T ss_pred cchhhhHHHHhhhccCcCHHHhcCCCCchhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHHHHHH
Confidence 100 00000 000 01122232 2356677887666554 5799999999997 4678999
Q ss_pred HHHHHHHHhCC-CCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 665 RKIYKALKENG-LPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 665 ~~~~~~l~~~g-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
++++++|+++| +++++.++++++|.+ ..+...+...+.|+.+.|+
T Consensus 234 ~~~~~~L~~~g~~~~~~~~~~~g~H~~---~~w~~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 234 QTFRDTYAADGGRNGVFNFPPNGTHSW---PYWNEQLVAMKADIQHVLN 279 (280)
T ss_dssp HHHHHHHHHTTCCSEEEECCSCCCSSH---HHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEecCCCccCh---HHHHHHHHHHHHHHHHHhC
Confidence 99999999999 999999999899976 3456777788888888775
No 110
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.77 E-value=1.3e-18 Score=174.50 Aligned_cols=183 Identities=14% Similarity=0.056 Sum_probs=134.6
Q ss_pred CCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEe--cCCCCCCCchhHHHhhccCCC----cccHHHHHHHHHHHH
Q 004816 490 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDV--NYGGSTGYGREFRERLLGRWG----IVDVNDCCSCATFLV 563 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~--d~rGs~g~g~~~~~~~~~~~~----~~~~~D~~~~~~~l~ 563 (729)
++.|+||++||++.. ...|...++.|++ +|.|+++ |++|.++++.... ...+... ....+|+.++++++.
T Consensus 60 ~~~p~vv~~HG~~~~--~~~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 135 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGD--ENQFFDFGARLLP-QATILSPVGDVSEHGAARFFRR-TGEGVYDMVDLERATGKMADFIKANR 135 (251)
T ss_dssp TTSCEEEEECCTTCC--HHHHHHHHHHHST-TSEEEEECCSEEETTEEESSCB-CGGGCBCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCC--HhHHHHHHHhcCC-CceEEEecCCcCCCCCcccccC-CCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 356999999998543 3456667777776 4999999 6776654321000 0000001 113677778888877
Q ss_pred hCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccC
Q 004816 564 GSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVD 642 (729)
Q Consensus 564 ~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~ 642 (729)
++. +.++++|+|||+||++++.++. +|++++++|+++|..+... .....
T Consensus 136 ~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~----------------------------~~~~~ 185 (251)
T 2r8b_A 136 EHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP----------------------------KISPA 185 (251)
T ss_dssp HHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC----------------------------CCCCC
T ss_pred hcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc----------------------------ccccc
Confidence 664 6789999999999999999987 9999999999999865321 01223
Q ss_pred CCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 643 KFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 643 ~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
.+++|+|+++|++|.++|++++.++++.|++++.++++ ++++++|.+. .+..+.+.+||.++|+
T Consensus 186 ~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 186 KPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVET-VWHPGGHEIR-----SGEIDAVRGFLAAYGG 249 (251)
T ss_dssp CTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEE-EEESSCSSCC-----HHHHHHHHHHHGGGC-
T ss_pred ccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEE-EecCCCCccC-----HHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999999987777777 6667899873 3456788999999886
No 111
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.76 E-value=9.3e-18 Score=170.21 Aligned_cols=216 Identities=20% Similarity=0.263 Sum_probs=135.3
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHh
Q 004816 463 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 542 (729)
Q Consensus 463 ~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~ 542 (729)
+... ||.++++..+.. .|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+.....
T Consensus 3 ~~~~-~g~~l~y~~~G~------------g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-- 65 (271)
T 3ia2_A 3 FVAK-DGTQIYFKDWGS------------GKPVLFSHGWLLD--ADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT-- 65 (271)
T ss_dssp EECT-TSCEEEEEEESS------------SSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSS--
T ss_pred EEcC-CCCEEEEEccCC------------CCeEEEECCCCCc--HHHHHHHHHHHHhCCceEEEecCCCCccCCCCCC--
Confidence 4455 888888665521 2468899998543 3556777888999999999999998765432210
Q ss_pred hccCCC-cccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh--CCCcceEEEEeccccCh------------
Q 004816 543 LLGRWG-IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA--FRDTFKAGASLYGVADL------------ 607 (729)
Q Consensus 543 ~~~~~~-~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~--~~~~~~a~v~~~~~~d~------------ 607 (729)
.+. ....+|+.++++.+ +.+++.++||||||++++.++. .|++++++|+.++....
T Consensus 66 ---~~~~~~~a~d~~~~l~~l------~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 136 (271)
T 3ia2_A 66 ---GNDYDTFADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVP 136 (271)
T ss_dssp ---CCSHHHHHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBC
T ss_pred ---CCCHHHHHHHHHHHHHHh------CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCccccc
Confidence 111 01245555555554 3468999999999987766555 58999999998764311
Q ss_pred -hHH---hhh----cchhhhh----hhhhh----c--------------CCh-------hhhhhcCcccccCCCCCCEEE
Q 004816 608 -SML---RAE----THKFESR----YIDNL----V--------------GSE-------KDYYEKSPINFVDKFSCPIIL 650 (729)
Q Consensus 608 -~~~---~~~----~~~~~~~----~~~~~----~--------------~~~-------~~~~~~sp~~~~~~i~~PvL~ 650 (729)
..+ ... ...+... +.... . ... ..+...+....+.++++|+|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lv 216 (271)
T 3ia2_A 137 LDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLV 216 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEE
T ss_pred HHHHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEE
Confidence 000 000 0000000 00000 0 000 001112222346789999999
Q ss_pred EEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 651 FQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 651 i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
++|++|.++|++.+.++++.+.. ..+++++|++||.+. .+...++.+.+.+|+.
T Consensus 217 i~G~~D~~~p~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 217 IHGDGDQIVPFETTGKVAAELIK---GAELKVYKDAPHGFA-VTHAQQLNEDLLAFLK 270 (271)
T ss_dssp EEETTCSSSCGGGTHHHHHHHST---TCEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred EEeCCCCcCChHHHHHHHHHhCC---CceEEEEcCCCCccc-ccCHHHHHHHHHHHhh
Confidence 99999999999876555544422 459999999999764 3566788888888875
No 112
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.76 E-value=8.6e-18 Score=169.42 Aligned_cols=186 Identities=17% Similarity=0.186 Sum_probs=137.1
Q ss_pred EEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHH
Q 004816 474 AYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVN 553 (729)
Q Consensus 474 ~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~ 553 (729)
+.+|.|.+.. ..+++.|+||++||+++. ...|...++.|+++||.|+++|+||+. ...
T Consensus 34 ~~~~~p~~~~---~~g~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~~s~-----------------~~~ 91 (258)
T 2fx5_A 34 CRIYRPRDLG---QGGVRHPVILWGNGTGAG--PSTYAGLLSHWASHGFVVAAAETSNAG-----------------TGR 91 (258)
T ss_dssp EEEEEESSTT---GGGCCEEEEEEECCTTCC--GGGGHHHHHHHHHHTCEEEEECCSCCT-----------------TSH
T ss_pred EEEEeCCCCc---ccCCCceEEEEECCCCCC--chhHHHHHHHHHhCCeEEEEecCCCCc-----------------cHH
Confidence 5667776411 002367999999998543 456777889999999999999999641 124
Q ss_pred HHHHHHHHHHhC---------CCCCCCcEEEEEcChHHHHHHHHHhCCCcceEEEEeccccChhHHhhhcchhhhhhhhh
Q 004816 554 DCCSCATFLVGS---------GKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVADLSMLRAETHKFESRYIDN 624 (729)
Q Consensus 554 D~~~~~~~l~~~---------~~~d~~ri~i~G~S~GG~~a~~~~~~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 624 (729)
|+..+++++.+. ..+|.++++++|||+||++++.++ .+++++++++.+|......
T Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a-~~~~v~~~v~~~~~~~~~~--------------- 155 (258)
T 2fx5_A 92 EMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG-QDTRVRTTAPIQPYTLGLG--------------- 155 (258)
T ss_dssp HHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT-TSTTCCEEEEEEECCSSTT---------------
T ss_pred HHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc-cCcCeEEEEEecCcccccc---------------
Confidence 555666666542 245678999999999999999887 5568999999887543100
Q ss_pred hcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHH-HHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHH
Q 004816 625 LVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQ-ARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQ 703 (729)
Q Consensus 625 ~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 703 (729)
.....+.++++|+|+++|++|.++|++. +.++++. .+.+++++++++++|.+.. +....+.+.+
T Consensus 156 -----------~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~-~~~~~~~~~i 220 (258)
T 2fx5_A 156 -----------HDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRR---ANVPVFWGERRYVSHFEPV-GSGGAYRGPS 220 (258)
T ss_dssp -----------CCGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHH---CSSCEEEEEESSCCTTSST-TTCGGGHHHH
T ss_pred -----------cchhhhccCCCCEEEEEcCCCcccCchhhHHHHHhc---cCCCeEEEEECCCCCcccc-chHHHHHHHH
Confidence 0012356788999999999999999986 7777766 3467899999999998654 2234677889
Q ss_pred HHHHHHHhC
Q 004816 704 MVFFARVVG 712 (729)
Q Consensus 704 ~~fl~~~l~ 712 (729)
.+||++++.
T Consensus 221 ~~fl~~~l~ 229 (258)
T 2fx5_A 221 TAWFRFQLM 229 (258)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999998875
No 113
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.76 E-value=4.7e-18 Score=181.89 Aligned_cols=193 Identities=16% Similarity=0.218 Sum_probs=135.7
Q ss_pred CCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCch--------------hH-------HH---hhc
Q 004816 489 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGR--------------EF-------RE---RLL 544 (729)
Q Consensus 489 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~--------------~~-------~~---~~~ 544 (729)
+++.|+||++||+++. ...+...++.|+++||.|+++|+||.+.... .| .. ...
T Consensus 95 ~~~~P~Vv~~HG~~~~--~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 172 (383)
T 3d59_A 95 GEKYPLVVFSHGLGAF--RTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIR 172 (383)
T ss_dssp SSCEEEEEEECCTTCC--TTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHH
T ss_pred CCCCCEEEEcCCCCCC--chHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhh
Confidence 4578999999998544 3456788999999999999999998765321 00 00 000
Q ss_pred cCCCcccHHHHHHHHHHHHh--------------------CCCCCCCcEEEEEcChHHHHHHHHHhCCCcceEEEEeccc
Q 004816 545 GRWGIVDVNDCCSCATFLVG--------------------SGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGV 604 (729)
Q Consensus 545 ~~~~~~~~~D~~~~~~~l~~--------------------~~~~d~~ri~i~G~S~GG~~a~~~~~~~~~~~a~v~~~~~ 604 (729)
...-....+|+..++++|.+ ...+|.+||+++|||+||++++.++.++++|+++|+.+|.
T Consensus 173 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~v~a~v~~~~~ 252 (383)
T 3d59_A 173 NEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAW 252 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCCCccEEEEeCCc
Confidence 00000125788999999875 4557788999999999999999998866679999999885
Q ss_pred cChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEEC
Q 004816 605 ADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYE 684 (729)
Q Consensus 605 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ 684 (729)
.... .. ....++++|+|++||++|..+ .. .+..+.+...+.++++++++
T Consensus 253 ~~p~-------------------~~---------~~~~~i~~P~Lii~g~~D~~~--~~-~~~~~~l~~~~~~~~~~~~~ 301 (383)
T 3d59_A 253 MFPL-------------------GD---------EVYSRIPQPLFFINSEYFQYP--AN-IIKMKKCYSPDKERKMITIR 301 (383)
T ss_dssp CTTC-------------------CG---------GGGGSCCSCEEEEEETTTCCH--HH-HHHHHTTCCTTSCEEEEEET
T ss_pred cCCC-------------------ch---------hhhccCCCCEEEEecccccch--hh-HHHHHHHHhcCCceEEEEeC
Confidence 3210 00 112567899999999999743 33 33346666677889999999
Q ss_pred CCCcccCC---------------------cccH-HHHHHHHHHHHHHHhCCC
Q 004816 685 GEQHGFRK---------------------AENI-KFTLEQQMVFFARVVGHF 714 (729)
Q Consensus 685 ~~gH~~~~---------------------~~~~-~~~~~~~~~fl~~~l~~~ 714 (729)
+++|.+.. ++.. ....+.+++||+++|+..
T Consensus 302 g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~~~ 353 (383)
T 3d59_A 302 GSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLH 353 (383)
T ss_dssp TCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99998521 1112 233457999999999844
No 114
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.76 E-value=1.4e-17 Score=174.17 Aligned_cols=199 Identities=15% Similarity=0.106 Sum_probs=141.6
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccch-------hhhHHHhhCCcEEEEecCCCCCCCchhHHHhh-
Q 004816 472 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN-------LSIQYWTSRGWAFVDVNYGGSTGYGREFRERL- 543 (729)
Q Consensus 472 l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~-------~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~- 543 (729)
+.+.++.|.+ . +.|.||++||+.... ..|. .+++.|+++||.|+++|+||.|..+.......
T Consensus 50 ~~~~~~~p~~-------~-~~~~vvl~HG~g~~~--~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~ 119 (328)
T 1qlw_A 50 MYVRYQIPQR-------A-KRYPITLIHGCCLTG--MTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINA 119 (328)
T ss_dssp EEEEEEEETT-------C-CSSCEEEECCTTCCG--GGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHH
T ss_pred EEEEEEccCC-------C-CCccEEEEeCCCCCC--CccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCccccc
Confidence 5555566644 1 236699999985333 3344 47888999999999999998765543211100
Q ss_pred ---------------------------cc-CCCc---------ccHHH------------------HHHHHHHHHhCCCC
Q 004816 544 ---------------------------LG-RWGI---------VDVND------------------CCSCATFLVGSGKA 568 (729)
Q Consensus 544 ---------------------------~~-~~~~---------~~~~D------------------~~~~~~~l~~~~~~ 568 (729)
.+ .|.. ...++ +.+++..++++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-- 197 (328)
T 1qlw_A 120 VKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL-- 197 (328)
T ss_dssp HHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH--
T ss_pred ccccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh--
Confidence 00 0000 00122 445555555541
Q ss_pred CCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCC
Q 004816 569 DEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCP 647 (729)
Q Consensus 569 d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P 647 (729)
+++.++|||+||.+++.++. +|++++++|+.+|... .++......+++|
T Consensus 198 --~~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~----------------------------~~~~~~~~~~~~P 247 (328)
T 1qlw_A 198 --DGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC----------------------------PKPEDVKPLTSIP 247 (328)
T ss_dssp --TSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC----------------------------CCGGGCGGGTTSC
T ss_pred --CCceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC----------------------------CCHHHHhhccCCC
Confidence 38999999999999999988 8999999999997531 0011112235689
Q ss_pred EEEEEeCCCCCCCh-----HHHHHHHHHHHhCCCCEEEEEECCCC-----cccCCcccHHHHHHHHHHHHHHHhC
Q 004816 648 IILFQGLEDKVVPP-----DQARKIYKALKENGLPVALVEYEGEQ-----HGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 648 vL~i~G~~D~~vp~-----~~~~~~~~~l~~~g~~~~~~~~~~~g-----H~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
+|+++|++|..+|+ ++++++++.++++|.+++++++|++| |.+....+..+..+.+.+||++++.
T Consensus 248 vLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~ 322 (328)
T 1qlw_A 248 VLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTA 322 (328)
T ss_dssp EEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC
T ss_pred EEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhccc
Confidence 99999999999996 99999999999999999999999665 9876655578899999999999876
No 115
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.75 E-value=4.5e-17 Score=163.54 Aligned_cols=215 Identities=15% Similarity=0.107 Sum_probs=137.0
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++..+.+ ..|.||++||.+++ ....|...++.|+++||.|+++|+||.|.+... ...+
T Consensus 10 ~g~~l~~~~~g~-----------~~~~vvllHG~~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~-----~~~~ 72 (254)
T 2ocg_A 10 NGVQLHYQQTGE-----------GDHAVLLLPGMLGS-GETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPP-----DRDF 72 (254)
T ss_dssp TTEEEEEEEEEC-----------CSEEEEEECCTTCC-HHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSS-----CCCC
T ss_pred CCEEEEEEEecC-----------CCCeEEEECCCCCC-CccchHHHHHHHhhCCCeEEEECCCCCCCCCCC-----CCCC
Confidence 688887655421 12579999997433 133466778888899999999999987654321 1111
Q ss_pred Ccc-cHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHH----hhhc---chhh
Q 004816 548 GIV-DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSML----RAET---HKFE 618 (729)
Q Consensus 548 ~~~-~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~----~~~~---~~~~ 618 (729)
... -.+++..+++++.+. +.+++.++|||+||.+|+.++. +|++++++|+.++....... .... ..+.
T Consensus 73 ~~~~~~~~~~~~~~~l~~l---~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (254)
T 2ocg_A 73 PADFFERDAKDAVDLMKAL---KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWS 149 (254)
T ss_dssp CTTHHHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSC
T ss_pred ChHHHHHHHHHHHHHHHHh---CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHH
Confidence 111 123444555555443 3468999999999999999998 99999999998875322110 0000 0000
Q ss_pred hh---hhhhhcCC-------------hhhhh----hcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCE
Q 004816 619 SR---YIDNLVGS-------------EKDYY----EKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPV 678 (729)
Q Consensus 619 ~~---~~~~~~~~-------------~~~~~----~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~ 678 (729)
.. .+....+. ...+. .......+.++++|+|+++|++|.++|++.+..+.+.+. ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~----~~ 225 (254)
T 2ocg_A 150 ERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVK----GS 225 (254)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHST----TC
T ss_pred HHhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCC----CC
Confidence 00 00000000 00000 011234567899999999999999999999888887765 34
Q ss_pred EEEEECCCCcccCCcccHHHHHHHHHHHH
Q 004816 679 ALVEYEGEQHGFRKAENIKFTLEQQMVFF 707 (729)
Q Consensus 679 ~~~~~~~~gH~~~~~~~~~~~~~~~~~fl 707 (729)
+++++|++||.... +...++.+.+.+|+
T Consensus 226 ~~~~~~~~gH~~~~-e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 226 RLHLMPEGKHNLHL-RFADEFNKLAEDFL 253 (254)
T ss_dssp EEEEETTCCTTHHH-HTHHHHHHHHHHHH
T ss_pred EEEEcCCCCCchhh-hCHHHHHHHHHHHh
Confidence 89999999997543 45667777888886
No 116
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.75 E-value=6.4e-19 Score=188.86 Aligned_cols=210 Identities=14% Similarity=0.055 Sum_probs=138.8
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcc------------ccch----hhhHHHhhC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR------------GILN----LSIQYWTSR 520 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~------------~~~~----~~~~~la~~ 520 (729)
..+.+++.+. +|..+.++++.|.+ ..++.|+||++||..+.... ..|. .+++.|+++
T Consensus 86 ~~e~v~~~~~-~g~~l~~~l~~P~~------~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~ 158 (391)
T 3g8y_A 86 ILEKWEFYPF-PKSVSTFLVLKPEH------LKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKE 158 (391)
T ss_dssp EEEEEEECCS-TTCCEEEEEEEETT------CCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTT
T ss_pred EEEEEEEEcC-CCCEEEEEEEeCCC------CCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHC
Confidence 3477888887 89999999999975 13568999999997543210 0122 567899999
Q ss_pred CcEEEEecCCCCCCCchhHH--------H-hh-------ccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHH
Q 004816 521 GWAFVDVNYGGSTGYGREFR--------E-RL-------LGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYT 584 (729)
Q Consensus 521 G~~v~~~d~rGs~g~g~~~~--------~-~~-------~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~ 584 (729)
||+|+++|+||.+.++.... . .. ...+....+.|+.+++++|.+++.+|++||+|+|||+||++
T Consensus 159 G~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~ 238 (391)
T 3g8y_A 159 GYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEP 238 (391)
T ss_dssp TCEEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHH
T ss_pred CCEEEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHH
Confidence 99999999998776543210 0 00 01111223489999999999999899999999999999999
Q ss_pred HHHHHhCCCcceEEEEeccccChhHHhhhcch--------h---hhhhhhhhcCChhhhhhcCcccccCCC-CCCEEEEE
Q 004816 585 TLAALAFRDTFKAGASLYGVADLSMLRAETHK--------F---ESRYIDNLVGSEKDYYEKSPINFVDKF-SCPIILFQ 652 (729)
Q Consensus 585 a~~~~~~~~~~~a~v~~~~~~d~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~PvL~i~ 652 (729)
++.++..+++++++|+.+++..+......... + ...+.. ......+....+..+ ..|+|++|
T Consensus 239 al~~a~~~~~i~a~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p------~~~~~~d~~~~~~~~ap~P~Liih 312 (391)
T 3g8y_A 239 MMVLGVLDKDIYAFVYNDFLCQTQERAVVMTKPDKENRRPFPNSIRHLIP------GYWRYFNFPDVVASLAPRPIIFTE 312 (391)
T ss_dssp HHHHHHHCTTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGCCT------TGGGTCCHHHHHHTTTTSCEEECS
T ss_pred HHHHHHcCCceeEEEEccCCCCcccchhhcccccccccccccccHHHhCc------cHHhhCCHHHHHHhhcCCCEEEEc
Confidence 99998877899999999888877433211100 0 001111 111112222222222 36999999
Q ss_pred eCCCCCCChHHHHHHHHHHHhCCC--CEEEEEEC
Q 004816 653 GLEDKVVPPDQARKIYKALKENGL--PVALVEYE 684 (729)
Q Consensus 653 G~~D~~vp~~~~~~~~~~l~~~g~--~~~~~~~~ 684 (729)
|++|.++ +. +.+.++..+. ++++..+|
T Consensus 313 G~~D~~v--~~---~~~~~~~~g~~~~~~~~~~~ 341 (391)
T 3g8y_A 313 GGLDRDF--RL---VQSAYAASGKPENAEFHHYP 341 (391)
T ss_dssp CBCHHHH--HH---HHHHHHHTTCGGGEEECCCG
T ss_pred CCccHHH--HH---HHHHHHHcCCCceeEEEEeC
Confidence 9999876 33 3444444443 45665555
No 117
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.75 E-value=3.4e-17 Score=169.94 Aligned_cols=219 Identities=12% Similarity=0.115 Sum_probs=142.2
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchh
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE 538 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~ 538 (729)
+...+.. +|..+.+..+.+ .|+||++||.+.. ...|...++.|++ ||.|+++|+||.|.....
T Consensus 49 ~~~~~~~--~~~~~~~~~~g~------------~p~vv~lhG~~~~--~~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~ 111 (314)
T 3kxp_A 49 ISRRVDI--GRITLNVREKGS------------GPLMLFFHGITSN--SAVFEPLMIRLSD-RFTTIAVDQRGHGLSDKP 111 (314)
T ss_dssp EEEEEEC--SSCEEEEEEECC------------SSEEEEECCTTCC--GGGGHHHHHTTTT-TSEEEEECCTTSTTSCCC
T ss_pred ceeeEEE--CCEEEEEEecCC------------CCEEEEECCCCCC--HHHHHHHHHHHHc-CCeEEEEeCCCcCCCCCC
Confidence 3344444 677887655422 4789999998544 3456677777777 699999999987654311
Q ss_pred HHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhc---
Q 004816 539 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAET--- 614 (729)
Q Consensus 539 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~--- 614 (729)
......++..+.+..+++.. +.++++++|||+||++++.++. +|++++++|+.++...........
T Consensus 112 --------~~~~~~~~~~~dl~~~l~~l--~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 181 (314)
T 3kxp_A 112 --------ETGYEANDYADDIAGLIRTL--ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEA 181 (314)
T ss_dssp --------SSCCSHHHHHHHHHHHHHHH--TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHH
T ss_pred --------CCCCCHHHHHHHHHHHHHHh--CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHH
Confidence 11233455555555444432 3379999999999999999998 999999999998765332111000
Q ss_pred --c-------hh--hhhhhhhhc-C-Chh---hh---------------------------hhcCcccccCCCCCCEEEE
Q 004816 615 --H-------KF--ESRYIDNLV-G-SEK---DY---------------------------YEKSPINFVDKFSCPIILF 651 (729)
Q Consensus 615 --~-------~~--~~~~~~~~~-~-~~~---~~---------------------------~~~sp~~~~~~i~~PvL~i 651 (729)
. .. ...+..... . ... .+ ...+....+.++++|+|++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii 261 (314)
T 3kxp_A 182 RVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIV 261 (314)
T ss_dssp HTTTTCSCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEE
T ss_pred HhhhchhhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEE
Confidence 0 00 000000000 0 000 00 0003344566789999999
Q ss_pred EeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 652 QGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 652 ~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
+|++|.++|++.+.++.+.+. .++++++|++||.+. .+....+.+.+.+||++
T Consensus 262 ~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~g~gH~~~-~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 262 RGESSKLVSAAALAKTSRLRP----DLPVVVVPGADHYVN-EVSPEITLKAITNFIDA 314 (314)
T ss_dssp EETTCSSSCHHHHHHHHHHCT----TSCEEEETTCCSCHH-HHCHHHHHHHHHHHHHC
T ss_pred ecCCCccCCHHHHHHHHHhCC----CceEEEcCCCCCcch-hhCHHHHHHHHHHHHhC
Confidence 999999999999998888774 358999999999863 34566788888888863
No 118
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.75 E-value=8.5e-17 Score=164.78 Aligned_cols=220 Identities=16% Similarity=0.185 Sum_probs=140.3
Q ss_pred EEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccc-cchhhhHHHhhCCcEEEEecCCCCCCCch-h
Q 004816 461 IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSRGWAFVDVNYGGSTGYGR-E 538 (729)
Q Consensus 461 ~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~~~~la~~G~~v~~~d~rGs~g~g~-~ 538 (729)
..+... +|.++++..+.|.+ .|.||++||.+.+. . .|...+..| +.||.|+++|+||.|.+.. .
T Consensus 5 ~~~~~~-~g~~l~~~~~G~~~----------~~~vvllHG~~~~~--~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~ 70 (286)
T 2yys_A 5 IGYVPV-GEAELYVEDVGPVE----------GPALFVLHGGPGGN--AYVLREGLQDY-LEGFRVVYFDQRGSGRSLELP 70 (286)
T ss_dssp EEEEEC-SSCEEEEEEESCTT----------SCEEEEECCTTTCC--SHHHHHHHGGG-CTTSEEEEECCTTSTTSCCCC
T ss_pred eeEEeE-CCEEEEEEeecCCC----------CCEEEEECCCCCcc--hhHHHHHHHHh-cCCCEEEEECCCCCCCCCCCc
Confidence 334444 78889877765421 36799999985443 4 466677777 4689999999998765432 1
Q ss_pred HHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhh----
Q 004816 539 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAE---- 613 (729)
Q Consensus 539 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~---- 613 (729)
. . ......+++.+.+..+++.- +.+++.|+||||||.+|+.++. +|+ ++++|+.++..........
T Consensus 71 ~-----~-~~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~ 141 (286)
T 2yys_A 71 Q-----D-PRLFTVDALVEDTLLLAEAL--GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEA 141 (286)
T ss_dssp S-----C-GGGCCHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHH
T ss_pred c-----C-cccCcHHHHHHHHHHHHHHh--CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHH
Confidence 0 0 00122334433333333331 3468999999999999999998 999 9999999986533220000
Q ss_pred ---------cchhh--------hhhhhh--h---------------cC---Ch---hh-----hhhcCcccccCCCCCCE
Q 004816 614 ---------THKFE--------SRYIDN--L---------------VG---SE---KD-----YYEKSPINFVDKFSCPI 648 (729)
Q Consensus 614 ---------~~~~~--------~~~~~~--~---------------~~---~~---~~-----~~~~sp~~~~~~i~~Pv 648 (729)
...+. ..+... . .. .. .. ....+....+.++++|+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 221 (286)
T 2yys_A 142 AGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPL 221 (286)
T ss_dssp TTCCCCSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSCE
T ss_pred hccccchhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCCE
Confidence 00000 000000 0 00 00 00 01112233467889999
Q ss_pred EEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 649 ILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 649 L~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
|+++|++|..+|++ ++++.+ +.. +++++++++||... .+...++.+.+.+|+.+.
T Consensus 222 lvi~G~~D~~~~~~-~~~~~~-~~~----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 222 YVLVGERDGTSYPY-AEEVAS-RLR----APIRVLPEAGHYLW-IDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp EEEEETTCTTTTTT-HHHHHH-HHT----CCEEEETTCCSSHH-HHCHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCcCCHh-HHHHHh-CCC----CCEEEeCCCCCCcC-hhhHHHHHHHHHHHHHhh
Confidence 99999999999999 888888 763 47899999999754 345678888999999864
No 119
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.75 E-value=4.7e-18 Score=165.17 Aligned_cols=190 Identities=12% Similarity=0.075 Sum_probs=136.1
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchh--hhHHHhhCCcEEEEecCCCCCCCchhHHHhhcc
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL--SIQYWTSRGWAFVDVNYGGSTGYGREFRERLLG 545 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~--~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~ 545 (729)
+|.+++++.+.|.+ +++.|+||++||.+... ..|.. .++.|+++||.|+++|+||.+..... ....
T Consensus 15 ~g~~l~~~~~~p~~-------~~~~~~vv~~hG~~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~---~~~~ 82 (210)
T 1imj_A 15 QGQALFFREALPGS-------GQARFSVLLLHGIRFSS--ETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEA---AAPA 82 (210)
T ss_dssp TTEEECEEEEECSS-------SCCSCEEEECCCTTCCH--HHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTS---CCSS
T ss_pred CCeEEEEEEeCCCC-------CCCCceEEEECCCCCcc--ceeecchhHHHHHHCCCeEEEecCCCCCCCCCC---CCcc
Confidence 79999999998864 34578999999985433 34444 47889999999999999975432221 1111
Q ss_pred CCCcc-cHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhh
Q 004816 546 RWGIV-DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYID 623 (729)
Q Consensus 546 ~~~~~-~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~ 623 (729)
.+... ..+|+..+++.+ +.++++++|||+||.+++.++. +|++++++|+.+|......
T Consensus 83 ~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~-------------- 142 (210)
T 1imj_A 83 PIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI-------------- 142 (210)
T ss_dssp CTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS--------------
T ss_pred hhhhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc--------------
Confidence 11110 125666666665 3468999999999999999888 8999999999998754210
Q ss_pred hhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHH
Q 004816 624 NLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQ 703 (729)
Q Consensus 624 ~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 703 (729)
....+.++++|+|+++|++|. ++++.++++ +.+ .+++++++++++|.+.. +......+.+
T Consensus 143 -------------~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~----~~~~~~~~~~~~H~~~~-~~~~~~~~~i 202 (210)
T 1imj_A 143 -------------NAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQL----PNHRVLIMKGAGHPCYL-DKPEEWHTGL 202 (210)
T ss_dssp -------------CHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTS----SSEEEEEETTCCTTHHH-HCHHHHHHHH
T ss_pred -------------cchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhC----CCCCEEEecCCCcchhh-cCHHHHHHHH
Confidence 112234678999999999999 988777666 443 36799999999997532 3355677788
Q ss_pred HHHHHH
Q 004816 704 MVFFAR 709 (729)
Q Consensus 704 ~~fl~~ 709 (729)
.+|+++
T Consensus 203 ~~fl~~ 208 (210)
T 1imj_A 203 LDFLQG 208 (210)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 888865
No 120
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.74 E-value=2.5e-17 Score=167.38 Aligned_cols=218 Identities=18% Similarity=0.256 Sum_probs=136.4
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHh
Q 004816 463 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 542 (729)
Q Consensus 463 ~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~ 542 (729)
+... +|.++++..+.|.+ .|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+....
T Consensus 3 ~~~~-~g~~l~y~~~g~~~----------~~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--- 66 (275)
T 1a88_A 3 VTTS-DGTNIFYKDWGPRD----------GLPVVFHHGWPLS--ADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPS--- 66 (275)
T ss_dssp EECT-TSCEEEEEEESCTT----------SCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS---
T ss_pred EEcc-CCCEEEEEEcCCCC----------CceEEEECCCCCc--hhhHHHHHHHHHHCCceEEEEcCCcCCCCCCCC---
Confidence 3444 78888876665422 3679999997543 345777888999999999999999876543211
Q ss_pred hccCCCc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C-CCcceEEEEeccccCh------------
Q 004816 543 LLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F-RDTFKAGASLYGVADL------------ 607 (729)
Q Consensus 543 ~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~-~~~~~a~v~~~~~~d~------------ 607 (729)
..+.. ...+|+.++++.+ +.+++.++||||||.+++.++. + |++++++|+.++....
T Consensus 67 --~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 138 (275)
T 1a88_A 67 --TGHDMDTYAADVAALTEAL------DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLP 138 (275)
T ss_dssp --SCCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBC
T ss_pred --CCCCHHHHHHHHHHHHHHc------CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCC
Confidence 11111 1145555555554 3468999999999999988665 5 9999999998864211
Q ss_pred -hHH---hhh----cchhhhhhhh-hhc-----------------------CChh-------hhhhcCcccccCCCCCCE
Q 004816 608 -SML---RAE----THKFESRYID-NLV-----------------------GSEK-------DYYEKSPINFVDKFSCPI 648 (729)
Q Consensus 608 -~~~---~~~----~~~~~~~~~~-~~~-----------------------~~~~-------~~~~~sp~~~~~~i~~Pv 648 (729)
..+ ... ...+...+.. ... .... .+...+....+.++++|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 218 (275)
T 1a88_A 139 LEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPV 218 (275)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCE
T ss_pred HHHHHHHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCE
Confidence 000 000 0000000000 000 0000 011112223456789999
Q ss_pred EEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 649 ILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 649 L~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
|+++|++|..+|++...+.+..+. .++++++++++||.+. .+...++.+.+.+|+.
T Consensus 219 lii~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 219 LVAHGTDDQVVPYADAAPKSAELL---ANATLKSYEGLPHGML-STHPEVLNPDLLAFVK 274 (275)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHHS---TTEEEEEETTCCTTHH-HHCHHHHHHHHHHHHH
T ss_pred EEEecCCCccCCcHHHHHHHHhhC---CCcEEEEcCCCCccHH-HhCHHHHHHHHHHHhh
Confidence 999999999999875444333322 2679999999999764 3566788888889885
No 121
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.74 E-value=1.4e-18 Score=186.46 Aligned_cols=212 Identities=15% Similarity=0.059 Sum_probs=140.4
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcc------------ccch----hhhHHHhhC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR------------GILN----LSIQYWTSR 520 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~------------~~~~----~~~~~la~~ 520 (729)
..+.+.+.+. +|..+.++++.|.+ ..++.|+||++||++.+... ..|. ..++.|+++
T Consensus 91 ~~e~v~~~~~-~g~~l~~~l~~P~~------~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~ 163 (398)
T 3nuz_A 91 RLEKWEFYPL-PKCVSTFLVLIPDN------INKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKE 163 (398)
T ss_dssp EEEEEEECCS-TTBCEEEEEEEESS------CCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTT
T ss_pred EEEEEEEEcC-CCcEEEEEEEeCCC------CCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHC
Confidence 4577888887 99999999999976 23568999999998553221 1222 477899999
Q ss_pred CcEEEEecCCCCCCCchhHHHh----------------hccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHH
Q 004816 521 GWAFVDVNYGGSTGYGREFRER----------------LLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYT 584 (729)
Q Consensus 521 G~~v~~~d~rGs~g~g~~~~~~----------------~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~ 584 (729)
||+|+++|+||.++.+...... ....++...+.|+.++++||.+++.+|++||+|+|||+||++
T Consensus 164 Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~ 243 (398)
T 3nuz_A 164 GYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEP 243 (398)
T ss_dssp TCEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHH
T ss_pred CCEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHH
Confidence 9999999999877654322100 111122234689999999999998899999999999999999
Q ss_pred HHHHHhCCCcceEEEEeccccChhHHhhhcch-----------hhhhhhhhhcCChhhhhhcCcccccCC-CCCCEEEEE
Q 004816 585 TLAALAFRDTFKAGASLYGVADLSMLRAETHK-----------FESRYIDNLVGSEKDYYEKSPINFVDK-FSCPIILFQ 652 (729)
Q Consensus 585 a~~~~~~~~~~~a~v~~~~~~d~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~sp~~~~~~-i~~PvL~i~ 652 (729)
++.++..+++++++|+.+++..+......... ....+.. ......+....+.. ...|+|++|
T Consensus 244 a~~~aa~~~~i~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~d~~~~~~~~ap~PlLii~ 317 (398)
T 3nuz_A 244 MMVLGTLDTSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHLIP------DFWKNFNFPDIVAALAPRPIILTE 317 (398)
T ss_dssp HHHHHHHCTTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGCCT------THHHHCCHHHHHHHTTTSCEEECS
T ss_pred HHHHHhcCCcEEEEEEecccccchhhhhhhccccccccccCCccHHHhcc------hHhhhCCHHHHHHhhCCCcEEEee
Confidence 99888877789999998777766543111110 0001111 11111111111111 236999999
Q ss_pred eCCCCCCChHHHHHHHHHHHhCCCCEEEEEEC
Q 004816 653 GLEDKVVPPDQARKIYKALKENGLPVALVEYE 684 (729)
Q Consensus 653 G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ 684 (729)
|..|..+ ++..++++++. ...++++++||
T Consensus 318 G~~D~~v--~~~~~~y~~~g-~~~~~~~~~~p 346 (398)
T 3nuz_A 318 GGLDRDL--DLVRKAYAIVG-TPDNVKIYHYK 346 (398)
T ss_dssp CBCHHHH--HHHHHHHHHHT-CTTSEEECCCG
T ss_pred CCchHHH--HHHHHHHHHcC-CCcceEEEEeC
Confidence 9999543 45555555443 23467777776
No 122
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=8.9e-17 Score=185.21 Aligned_cols=253 Identities=12% Similarity=0.054 Sum_probs=176.7
Q ss_pred CceEEEECCEEEEEECC---CC--cEEEEeCCCCCCCCeecCCCCCCCceeee---------cceec--CCCCE-EEEEE
Q 004816 147 GGAFRIFGDTVIFSNYK---DQ--RLYKHSIDSKDSSPLPITPDYGEPLVSYA---------DGIFD--PRFNR-YVTVR 209 (729)
Q Consensus 147 ~~~~~~~~~~i~~~~~~---~~--~l~~~d~~~~~~~~~~lt~~~~~~~~~~~---------~~~~S--PdG~~-l~~~~ 209 (729)
.....++++.++|.... ++ .||.+ ..+ +..++|+... ..+. .+.|+ |||++ |+|+.
T Consensus 26 ~~~~~~s~~~~~~~~~~~~~~~~~~l~~~-~~~--~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~ 98 (662)
T 3azo_A 26 PACVGAVGDEVWWVAPRPAEAGRATLVRR-RAD--GAEESALPAP----WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH 98 (662)
T ss_dssp CEEEEEETTEEEEEEEETTTTTEEEEEEE-CTT--SCEEESSCTT----CCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred cceeEEcCCeEEEEecCcccCCcEEEEEE-CCC--CCcceeCCCC----ccccccccccCCccceeeeecCCCeEEEEEE
Confidence 44566778888888752 22 67777 444 7788888763 2222 44565 99999 88876
Q ss_pred eccCCCCCCcceEEEEEEcC--C-CceEEeee-----CCCeeeeeeeCCCCCeEEEEEecCCC--CCCCCcEEEEEEecC
Q 004816 210 EDRRQDALNSTTEIVAIALN--G-QNIQVLVS-----GSDFYAFPRMDPRGERMAWIEWHHPN--MPWDKAELWVGYISE 279 (729)
Q Consensus 210 ~~~~~~~~~~~~~l~~~dl~--~-g~~~~lt~-----~~~~~~~~~~SPDG~~la~~~~~~~~--~~~~~~~l~~~d~~~ 279 (729)
... .+||+++++ + ++.++|+. .......++|||||++|+|.+.+... ......+||++|++
T Consensus 99 ~~~--------~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~- 169 (662)
T 3azo_A 99 FGD--------QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLD- 169 (662)
T ss_dssp TTT--------CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETT-
T ss_pred CCC--------CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECC-
Confidence 532 569999998 6 88889987 34566789999999999999865311 00134679999998
Q ss_pred C------CCeeeeEEec-CCCCCccccccCceeCCCCc-EEEEEecCC----CceEEEEEEcC-CC---eEEEeecc-Cc
Q 004816 280 N------GDVYKRVCVA-GFDPTIVESPTEPKWSSKGE-LFFVTDRKN----GFWNLHKWIES-NN---EVLAIYSL-DA 342 (729)
Q Consensus 280 ~------g~~~~~~~~~-~~~~~~~~~~~~~~wspDG~-l~~~~~~~~----g~~~l~~~d~~-~g---~~~~l~~~-~~ 342 (729)
+ ++. +.+. ... .....+.|||||+ |+|.+.... +...|+++|++ +| +.+.++.. ..
T Consensus 170 ~~~~~~~~~~---~~l~~~~~----~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~ 242 (662)
T 3azo_A 170 GSAAADRSAV---RELSDDAH----RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE 242 (662)
T ss_dssp STTTTCGGGS---EESSCSCS----SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB
T ss_pred CCccccCCce---eEEEecCC----CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc
Confidence 5 443 2333 332 4556799999999 888876522 23689999998 57 66777643 34
Q ss_pred cccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccCCcce---------EEe-eeeCCEEEE
Q 004816 343 EFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDI---------DNI-TLGNDCLFV 412 (729)
Q Consensus 343 ~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~~~~v---------~~~-~~~~~~~~~ 412 (729)
....+.|++ |++ +++.+++++..+||++++++++.++++.....+ ..+ ..+++++++
T Consensus 243 ~~~~~~~sp------------dg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 243 AIAQAEWAP------------DGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp CEEEEEECT------------TSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred eEcceEECC------------CCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 455567765 676 888888888889999999899988887653322 223 334666666
Q ss_pred EEeCCCCCceEEEEEcCCCcceeee
Q 004816 413 EGASGVEPSSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 413 ~~~~~~~~~~ly~~d~~~~~~~~lt 437 (729)
.... ....||.+++++++.++|+
T Consensus 310 ~~~~--~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 310 VHGK--GAAVLGILDPESGELVDAA 332 (662)
T ss_dssp EEBS--SSCEEEEEETTTTEEEECC
T ss_pred EEEc--CccEEEEEECCCCcEEEec
Confidence 6654 6678999999888876665
No 123
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.74 E-value=1.6e-17 Score=169.09 Aligned_cols=218 Identities=18% Similarity=0.306 Sum_probs=136.4
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHh
Q 004816 463 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 542 (729)
Q Consensus 463 ~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~ 542 (729)
+... +|.++++..+.|.+ .|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+....
T Consensus 4 ~~~~-~g~~l~y~~~g~~~----------~~~vvllHG~~~~--~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~--- 67 (276)
T 1zoi_A 4 VTTK-DGVQIFYKDWGPRD----------APVIHFHHGWPLS--ADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVW--- 67 (276)
T ss_dssp EECT-TSCEEEEEEESCTT----------SCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS---
T ss_pred EECC-CCcEEEEEecCCCC----------CCeEEEECCCCcc--hhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC---
Confidence 3444 78888877665422 3679999998543 345777888999999999999999876654211
Q ss_pred hccCCCc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C-CCcceEEEEeccccCh------------
Q 004816 543 LLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F-RDTFKAGASLYGVADL------------ 607 (729)
Q Consensus 543 ~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~-~~~~~a~v~~~~~~d~------------ 607 (729)
..+.. ...+|+.++++.+ +.+++.|+||||||.+++.++. + |++++++|+.++....
T Consensus 68 --~~~~~~~~~~d~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 139 (276)
T 1zoi_A 68 --DGHDMDHYADDVAAVVAHL------GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLP 139 (276)
T ss_dssp --SCCSHHHHHHHHHHHHHHH------TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBC
T ss_pred --CCCCHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCcccccccccccccc
Confidence 11111 1145566666655 3468999999999999988665 6 9999999998864210
Q ss_pred -hHH---hhh----cchhhhhhhh-hhc-----------------------CChhh-------hhhcCcccccCCCCCCE
Q 004816 608 -SML---RAE----THKFESRYID-NLV-----------------------GSEKD-------YYEKSPINFVDKFSCPI 648 (729)
Q Consensus 608 -~~~---~~~----~~~~~~~~~~-~~~-----------------------~~~~~-------~~~~sp~~~~~~i~~Pv 648 (729)
..+ ... ...+...+.. ... ..... +...+....+.++++|+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 219 (276)
T 1zoi_A 140 KSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPV 219 (276)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCE
T ss_pred HHHHHHHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCE
Confidence 000 000 0000000000 000 00000 01112223456789999
Q ss_pred EEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 649 ILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 649 L~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
|+++|++|.++|++...+.+..+. .+.++++++++||... .+...++.+.+.+|+.
T Consensus 220 l~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 220 LVMHGDDDQIVPYENSGVLSAKLL---PNGALKTYKGYPHGMP-TTHADVINADLLAFIR 275 (276)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHHS---TTEEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred EEEEcCCCcccChHHHHHHHHhhC---CCceEEEcCCCCCchh-hhCHHHHHHHHHHHhc
Confidence 999999999999874443333322 2579999999999764 3566788888888874
No 124
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.74 E-value=7.3e-17 Score=164.15 Aligned_cols=215 Identities=19% Similarity=0.253 Sum_probs=140.0
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccc-cc-hhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhcc
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-IL-NLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLG 545 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~-~~-~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~ 545 (729)
+|..+ .+|.|.+ ++.|+||++|||++..... .+ ......+++.||.|+.+|||+.+.+ .+.
T Consensus 13 ~~~~~--~~y~p~~--------~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~--~~p----- 75 (274)
T 2qru_A 13 NGATV--TIYPTTT--------EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT--KID----- 75 (274)
T ss_dssp TSCEE--EEECCSS--------SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS--CHH-----
T ss_pred CCeeE--EEEcCCC--------CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC--CCc-----
Confidence 56555 4566642 3468999999997543322 23 4456677888999999999986643 221
Q ss_pred CCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh----CCCcceEEEEeccccChhHHhhh----cchh
Q 004816 546 RWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA----FRDTFKAGASLYGVADLSMLRAE----THKF 617 (729)
Q Consensus 546 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~----~~~~~~a~v~~~~~~d~~~~~~~----~~~~ 617 (729)
..++|+.++++|+.++.. +.++|+|+|+|+||.+|+.++. .+++++++++.+|..+....... ....
T Consensus 76 ----~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~ 150 (274)
T 2qru_A 76 ----HILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAI 150 (274)
T ss_dssp ----HHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCC
T ss_pred ----HHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccc
Confidence 237999999999987642 2689999999999999998875 57789999999887762111000 0000
Q ss_pred hhhhhhhh----------c-------------CChhhhhh--------cCcc--cccCCCCCCEEEEEeCCCCCCChHHH
Q 004816 618 ESRYIDNL----------V-------------GSEKDYYE--------KSPI--NFVDKFSCPIILFQGLEDKVVPPDQA 664 (729)
Q Consensus 618 ~~~~~~~~----------~-------------~~~~~~~~--------~sp~--~~~~~i~~PvL~i~G~~D~~vp~~~~ 664 (729)
........ + .....+.. ..++ ..+..+ +|+||++|+.|..++..++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~ 229 (274)
T 2qru_A 151 SAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVPFRYS 229 (274)
T ss_dssp CSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHH
T ss_pred cHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcCHHHH
Confidence 00000000 0 00000000 0011 123455 7999999999999998888
Q ss_pred HHHHHHHHhCCCCEEEEEECCCCcccCCc---ccHHHHHHHHHHHHHH
Q 004816 665 RKIYKALKENGLPVALVEYEGEQHGFRKA---ENIKFTLEQQMVFFAR 709 (729)
Q Consensus 665 ~~~~~~l~~~g~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~~fl~~ 709 (729)
+++.+++. +++++++++++|+|... ....++++.+.+||++
T Consensus 230 ~~l~~~~~----~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 230 KKIGRTIP----ESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp HHHHHHST----TCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCC----CcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 77776654 56999999999998532 2334668888899875
No 125
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.74 E-value=1.6e-17 Score=167.41 Aligned_cols=206 Identities=12% Similarity=0.086 Sum_probs=134.0
Q ss_pred CCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCC
Q 004816 491 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 570 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 570 (729)
..|+||++||.+.. ...|...++.|++ ||.|+++|+||.|........ .......+++.+.+..+++. ++.
T Consensus 19 ~~p~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~ 89 (269)
T 4dnp_A 19 GERVLVLAHGFGTD--QSAWNRILPFFLR-DYRVVLYDLVCAGSVNPDFFD----FRRYTTLDPYVDDLLHILDA--LGI 89 (269)
T ss_dssp CSSEEEEECCTTCC--GGGGTTTGGGGTT-TCEEEEECCTTSTTSCGGGCC----TTTCSSSHHHHHHHHHHHHH--TTC
T ss_pred CCCEEEEEeCCCCc--HHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCC----ccccCcHHHHHHHHHHHHHh--cCC
Confidence 45899999998543 3456677788887 999999999986654331100 01111344554444444443 244
Q ss_pred CcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhH---------------Hhh----hcchhhhhhhhhhcC---
Q 004816 571 KRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSM---------------LRA----ETHKFESRYIDNLVG--- 627 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~---------------~~~----~~~~~~~~~~~~~~~--- 627 (729)
+++.++|||+||++++.++. +|++++++|+.++...... +.. ....+...+......
T Consensus 90 ~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (269)
T 4dnp_A 90 DCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADV 169 (269)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSSC
T ss_pred CeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCCC
Confidence 68999999999999999988 9999999999998543110 000 000000000000000
Q ss_pred --------------Ch-------hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCC
Q 004816 628 --------------SE-------KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGE 686 (729)
Q Consensus 628 --------------~~-------~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 686 (729)
.. ..+...+....+.++++|+|+++|++|..+|++.+.++.+.+.. .+++++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 246 (269)
T 4dnp_A 170 PAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGG---KNTVHWLNIE 246 (269)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSS---CEEEEEEEEE
T ss_pred hhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCC---CceEEEeCCC
Confidence 00 11112344456778899999999999999999999888887753 3799999999
Q ss_pred CcccCCcccHHHHHHHHHHHHHH
Q 004816 687 QHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 687 gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
||.... +...++.+.+.+|+.+
T Consensus 247 gH~~~~-~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 247 GHLPHL-SAPTLLAQELRRALSH 268 (269)
T ss_dssp SSCHHH-HCHHHHHHHHHHHHC-
T ss_pred CCCccc-cCHHHHHHHHHHHHhh
Confidence 997543 4566777788888765
No 126
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.74 E-value=1.6e-16 Score=185.63 Aligned_cols=259 Identities=18% Similarity=0.178 Sum_probs=171.7
Q ss_pred eEEEECCEEEEEECCCC-----cEEEEeCCCCCCCCeecCCCCCCCc---------------------eeeecceecCCC
Q 004816 149 AFRIFGDTVIFSNYKDQ-----RLYKHSIDSKDSSPLPITPDYGEPL---------------------VSYADGIFDPRF 202 (729)
Q Consensus 149 ~~~~~~~~i~~~~~~~~-----~l~~~d~~~~~~~~~~lt~~~~~~~---------------------~~~~~~~~SPdG 202 (729)
.|+++++.|++....++ .||++|+++ ++.++++......+ ..+..++|||||
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg 120 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS--GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDA 120 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETTT--CCEEEEECGGGTC--------------------CCEESCCCEECTTS
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECCC--CceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCC
Confidence 45555668888876454 899999998 77776664311100 235788999999
Q ss_pred CEEEEEEeccCCCCCCcceEEEEEEcCCC---ceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecC
Q 004816 203 NRYVTVREDRRQDALNSTTEIVAIALNGQ---NIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE 279 (729)
Q Consensus 203 ~~l~~~~~~~~~~~~~~~~~l~~~dl~~g---~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~ 279 (729)
++|++... ..|+++|++++ +.++++........++|||||++|+|.+. .+||++|++
T Consensus 121 ~~l~~~~~----------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~---------~~i~~~d~~- 180 (741)
T 2ecf_A 121 QRLLFPLG----------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG---------RNLWVIDLA- 180 (741)
T ss_dssp SEEEEEET----------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET---------TEEEEEETT-
T ss_pred CEEEEEeC----------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC---------CcEEEEecC-
Confidence 99999875 46999999998 78888876667788999999999999872 259999998
Q ss_pred CCCeeeeEEecCCCC-------Ccc-----ccccCceeCCCCc-EEEEEecCC---------------------------
Q 004816 280 NGDVYKRVCVAGFDP-------TIV-----ESPTEPKWSSKGE-LFFVTDRKN--------------------------- 319 (729)
Q Consensus 280 ~g~~~~~~~~~~~~~-------~~~-----~~~~~~~wspDG~-l~~~~~~~~--------------------------- 319 (729)
+++. ..+...... +|. .....+.|||||+ |++.+.+..
T Consensus 181 ~g~~--~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 258 (741)
T 2ecf_A 181 SGRQ--MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGD 258 (741)
T ss_dssp TTEE--EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTS
T ss_pred CCCE--EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCC
Confidence 6654 223222210 000 0136789999999 888765411
Q ss_pred --CceEEEEEEcCC-CeEEEeecc---CccccCCc-----------------------------------------cccc
Q 004816 320 --GFWNLHKWIESN-NEVLAIYSL---DAEFSRPL-----------------------------------------WVFG 352 (729)
Q Consensus 320 --g~~~l~~~d~~~-g~~~~l~~~---~~~~~~~~-----------------------------------------w~~~ 352 (729)
+...|+++|+++ ++.+.+... ...+.... |...
T Consensus 259 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 259 ANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPL 338 (741)
T ss_dssp CCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred CCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCc
Confidence 223788888887 765544311 00000111 1111
Q ss_pred CcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccCCcceEEe---eeeCCEEEEEEeCCCC--CceEEEEE
Q 004816 353 INSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNI---TLGNDCLFVEGASGVE--PSSVAKVT 427 (729)
Q Consensus 353 ~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~~~~v~~~---~~~~~~~~~~~~~~~~--~~~ly~~d 427 (729)
...+.|.+ |++ ++++++++|..+||.++.+++ .+.|+.+.+.+..+ +++++.+++ .++.+. ...||.++
T Consensus 339 ~~~~~~sp---dg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~-~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 339 HNSLRFLD---DGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYF-RAGIESARESQIYAVP 412 (741)
T ss_dssp CSCCEECT---TSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEE-EECSSCTTCBEEEEEE
T ss_pred CCceEECC---CCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEE-EEeCCCCceEEEEEEE
Confidence 23455664 555 778888889899999998877 88898887777553 444445544 444444 34588888
Q ss_pred cCCCcceeee
Q 004816 428 LDDHKLKAVD 437 (729)
Q Consensus 428 ~~~~~~~~lt 437 (729)
.+++..++|+
T Consensus 413 ~~g~~~~~l~ 422 (741)
T 2ecf_A 413 LQGGQPQRLS 422 (741)
T ss_dssp TTCCCCEECC
T ss_pred cCCCCeeecc
Confidence 7776666665
No 127
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.74 E-value=6.8e-17 Score=167.14 Aligned_cols=222 Identities=16% Similarity=0.136 Sum_probs=141.4
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchh
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE 538 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~ 538 (729)
+...+.. ++..+.++.+.+. ..|+||++||++.+. ..|...+..|++ ||.|+++|+||.+|....
T Consensus 46 ~~~~v~~--~~~~~~~~~~g~~----------~~~~vv~lHG~~~~~--~~~~~~~~~L~~-g~~vi~~D~~G~gG~s~~ 110 (306)
T 2r11_A 46 KSFYIST--RFGQTHVIASGPE----------DAPPLVLLHGALFSS--TMWYPNIADWSS-KYRTYAVDIIGDKNKSIP 110 (306)
T ss_dssp EEEEECC--TTEEEEEEEESCT----------TSCEEEEECCTTTCG--GGGTTTHHHHHH-HSEEEEECCTTSSSSCEE
T ss_pred ceEEEec--CCceEEEEeeCCC----------CCCeEEEECCCCCCH--HHHHHHHHHHhc-CCEEEEecCCCCCCCCCC
Confidence 4555555 5677876665331 247899999986443 346667777877 999999999987443221
Q ss_pred HHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhh----
Q 004816 539 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAE---- 613 (729)
Q Consensus 539 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~---- 613 (729)
. ......+++...+..+++. ++.+++.|+|||+||++++.++. +|++++++|+.+|..........
T Consensus 111 ~-------~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 181 (306)
T 2r11_A 111 E-------NVSGTRTDYANWLLDVFDN--LGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKY 181 (306)
T ss_dssp C-------SCCCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHH
T ss_pred C-------CCCCCHHHHHHHHHHHHHh--cCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHH
Confidence 0 0112345555555555444 23478999999999999999988 99999999999987653211000
Q ss_pred -cc----hhhhhhhhhhcC----C-----------------hhhhh-------hcCcccccCCCCCCEEEEEeCCCCCCC
Q 004816 614 -TH----KFESRYIDNLVG----S-----------------EKDYY-------EKSPINFVDKFSCPIILFQGLEDKVVP 660 (729)
Q Consensus 614 -~~----~~~~~~~~~~~~----~-----------------~~~~~-------~~sp~~~~~~i~~PvL~i~G~~D~~vp 660 (729)
.. .....+...... . ...+. .......+.++++|+|+++|++|.++|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 261 (306)
T 2r11_A 182 ALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYD 261 (306)
T ss_dssp HHTTTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSC
T ss_pred HhHHHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccC
Confidence 00 000000000000 0 00000 011223456789999999999999999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 661 PDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 661 ~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
++.+.++++.+. .++++++++++||.+. .+...++.+.+.+||+
T Consensus 262 ~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 262 PHSALHRASSFV---PDIEAEVIKNAGHVLS-MEQPTYVNERVMRFFN 305 (306)
T ss_dssp HHHHHHHHHHHS---TTCEEEEETTCCTTHH-HHSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHC---CCCEEEEeCCCCCCCc-ccCHHHHHHHHHHHHh
Confidence 988876665542 2569999999999753 3445677788888875
No 128
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.74 E-value=8.8e-17 Score=165.21 Aligned_cols=205 Identities=15% Similarity=0.070 Sum_probs=136.5
Q ss_pred CCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccc-----cchhhhHHHhhC----CcEEEE
Q 004816 456 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-----ILNLSIQYWTSR----GWAFVD 526 (729)
Q Consensus 456 ~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~-----~~~~~~~~la~~----G~~v~~ 526 (729)
.+.+.+++.+. ++ .+.++++.|.+.. +.+++|+|+++||++.....+ .+...++.|+++ +|.|+.
T Consensus 39 g~~~~~~~~s~-~~-~~~~~vy~P~~~~----~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~ 112 (297)
T 1gkl_A 39 GRIVKETYTGI-NG-TKSLNVYLPYGYD----PNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVT 112 (297)
T ss_dssp CEEEEEEEEET-TE-EEEEEEEECTTCC----TTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEE
T ss_pred ceEEEEEEEcC-CC-EEEEEEEeCCCCC----CCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEE
Confidence 45677888886 54 8999999998732 256789999999986543322 123456667666 499999
Q ss_pred ecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCC---------CCCCCcEEEEEcChHHHHHHHHHh-CCCcce
Q 004816 527 VNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG---------KADEKRLCITGGSAGGYTTLAALA-FRDTFK 596 (729)
Q Consensus 527 ~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---------~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~ 596 (729)
+|++|+.+.+..|... ..+|+...++...... ..|+++++|+|+||||++|+.++. +|++|+
T Consensus 113 pd~~~~~~~~~~~~~~--------~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~ 184 (297)
T 1gkl_A 113 PTFNGGNCTAQNFYQE--------FRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVA 184 (297)
T ss_dssp CCSCSTTCCTTTHHHH--------HHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCC
T ss_pred ecCcCCccchHHHHHH--------HHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhh
Confidence 9999754433333211 1344444444332211 036788999999999999999987 999999
Q ss_pred EEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCC-
Q 004816 597 AGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENG- 675 (729)
Q Consensus 597 a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g- 675 (729)
++++.+|...+...... ....+ ..+... ..+.....++++.+|++|.. ..++++++++|+++|
T Consensus 185 ~~v~~sg~~~~~~~~~~----~~~~~-------~~~~~~---~~~~~~~~~l~~~~G~~D~~--~~~~~~l~~~L~~~g~ 248 (297)
T 1gkl_A 185 YFMPLSGDYWYGNSPQD----KANSI-------AEAINR---SGLSKREYFVFAATGSEDIA--YANMNPQIEAMKALPH 248 (297)
T ss_dssp EEEEESCCCCBSSSHHH----HHHHH-------HHHHHH---HTCCTTSCEEEEEEETTCTT--HHHHHHHHHHHHTSTT
T ss_pred eeeEeccccccCCccch----hhhHH-------HHHHhh---ccCCcCcEEEEEEeCCCccc--chhHHHHHHHHHHcCC
Confidence 99999997654211000 00000 000000 11222345677779999976 568899999999998
Q ss_pred ---------CCEEEEEECCCCccc
Q 004816 676 ---------LPVALVEYEGEQHGF 690 (729)
Q Consensus 676 ---------~~~~~~~~~~~gH~~ 690 (729)
+++++.++||++|.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 249 FDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp CCBBSCTTTCCEEEEEETTCCSSH
T ss_pred ccccccccCCceEEEECCCCCcCH
Confidence 699999999999975
No 129
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.74 E-value=8.9e-17 Score=163.24 Aligned_cols=217 Identities=15% Similarity=0.203 Sum_probs=134.1
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHh
Q 004816 463 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 542 (729)
Q Consensus 463 ~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~ 542 (729)
+... +|.++++..+. +.|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+....
T Consensus 3 ~~~~-~g~~l~y~~~g------------~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--- 64 (274)
T 1a8q_A 3 CTTR-DGVEIFYKDWG------------QGRPVVFIHGWPLN--GDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVW--- 64 (274)
T ss_dssp EECT-TSCEEEEEEEC------------SSSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS---
T ss_pred EEcc-CCCEEEEEecC------------CCceEEEECCCcch--HHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCC---
Confidence 3444 78888765542 12579999998543 345677788899999999999999876543211
Q ss_pred hccCCCc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C-CCcceEEEEeccccCh------------
Q 004816 543 LLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F-RDTFKAGASLYGVADL------------ 607 (729)
Q Consensus 543 ~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~-~~~~~a~v~~~~~~d~------------ 607 (729)
..+.. ...+|+.++++.+ +.+++.++||||||.+++.++. + |++++++|+.++....
T Consensus 65 --~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 136 (274)
T 1a8q_A 65 --DGYDFDTFADDLNDLLTDL------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVP 136 (274)
T ss_dssp --SCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBC
T ss_pred --CCCcHHHHHHHHHHHHHHc------CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccch
Confidence 11110 1134444444443 3468999999999999988665 5 9999999998864210
Q ss_pred -hHH---hhh----cchhhhhhhhhhc-----------------------CChh-------hhhhcCcccccCCCCCCEE
Q 004816 608 -SML---RAE----THKFESRYIDNLV-----------------------GSEK-------DYYEKSPINFVDKFSCPII 649 (729)
Q Consensus 608 -~~~---~~~----~~~~~~~~~~~~~-----------------------~~~~-------~~~~~sp~~~~~~i~~PvL 649 (729)
..+ ... ...+...+..... .... .+...+....+.++++|+|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 216 (274)
T 1a8q_A 137 DEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTL 216 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEE
T ss_pred HHHHHHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEE
Confidence 000 000 0000000000000 0000 0111222345678999999
Q ss_pred EEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCc-ccHHHHHHHHHHHHH
Q 004816 650 LFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKA-ENIKFTLEQQMVFFA 708 (729)
Q Consensus 650 ~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~-~~~~~~~~~~~~fl~ 708 (729)
+++|++|.++|++...+....+. .++++++++++||..... +...++.+.+.+|+.
T Consensus 217 ii~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 217 VVHGDDDQVVPIDATGRKSAQII---PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp EEEETTCSSSCGGGTHHHHHHHS---TTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred EEecCcCCCCCcHHHHHHHHhhC---CCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 99999999999975544433322 256999999999986542 266788888888874
No 130
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.74 E-value=2.3e-16 Score=161.37 Aligned_cols=262 Identities=8% Similarity=0.044 Sum_probs=185.3
Q ss_pred EcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCC----------
Q 004816 96 VDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD---------- 164 (729)
Q Consensus 96 ~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------- 164 (729)
+++ |+++||..... . ..||+++.+++ ..++|++.. ...+.++++.|+|+....
T Consensus 21 ~~~~g~~iy~~n~~d--~--~~ly~~~~dg~-~~~~l~~~~-----------~~~i~~~g~~Iyy~~~~~~~~~~~~~~~ 84 (302)
T 3s25_A 21 FCESDGEVFFSNTND--N--GRLYAMNIDGS-NIHKLSNDT-----------AMYINADKNYVYYVRNNNQKITSQTFFS 84 (302)
T ss_dssp EEEETTEEEEEEGGG--T--TEEEEEETTSC-SCEEEEEEE-----------EEEEEECSSEEEEEEECC------CCSS
T ss_pred EEEeCCEEEEEeCCC--C--ceEEEEcCCCC-CCEEccCCc-----------eeeEEEcCCEEEEEECCCCcccccceec
Confidence 445 99999987532 2 35999988843 566666432 234678899999998754
Q ss_pred ---CcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCC
Q 004816 165 ---QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSD 241 (729)
Q Consensus 165 ---~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~ 241 (729)
..||++++++ ++.++|+.. ....|+|+|++|+|+...... ...||++++++.+.++|+....
T Consensus 85 ~n~~~Iy~i~~dg--~~~~~l~~~--------~~~~~s~~g~~Iy~~~~~~~~-----~~~Iy~~~~dGs~~~~lt~~~~ 149 (302)
T 3s25_A 85 YDRNSLCRIKRNG--HGSTVLDPD--------PCIYASLIGNYIYYLHYDTQT-----ATSLYRIRIDGEEKKKIKNHYL 149 (302)
T ss_dssp CCSEEEEEEETTS--CCCEEEECS--------CEEEEEEETTEEEEEEESSSS-----CEEEEEEETTSCCCEEEESSCC
T ss_pred cCCCeEEEEeCCC--CcceEeecC--------CccEEEEeCCEEEEEeecCCC-----CceEEEEECCCCCeEEEeCCCc
Confidence 3799999998 778888876 122689999999998621111 3689999999988889987643
Q ss_pred eeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCC
Q 004816 242 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNG 320 (729)
Q Consensus 242 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g 320 (729)
+.|+|||++|+|++. + ..+||+++++ ++.. .+++.+. . ..| ++|+|+ |+|+... .+
T Consensus 150 ----~~~~~~g~~iy~t~~---g----~~~Iy~~~l~-g~~~--~~l~~~~-----~--~~~-~~P~g~~iy~t~~~-~~ 206 (302)
T 3s25_A 150 ----FTCNTSDRYFYYNNP---K----NGQLYRYDTA-SQSE--ALFYDCN-----C--YKP-VVLDDTNVYYMDVN-RD 206 (302)
T ss_dssp ----CCSEEETTEEEEECT---T----TCCEEEEETT-TTEE--EEEECSC-----E--EEE-EEEETTEEEEEEGG-GT
T ss_pred ----eEeeEECCEEEEEeC---C----CceEEEEECC-CCCE--EEEeCCC-----c--cce-eeecCCEEEEEEcC-CC
Confidence 568999999999973 1 3459999987 4442 3444432 2 124 449998 8887654 33
Q ss_pred ceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccCCcce
Q 004816 321 FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDI 400 (729)
Q Consensus 321 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~~~~v 400 (729)
.+|++++++++..++|+... .+.|.+ +++.|||.....+ .+|++++++|...++|..+. +
T Consensus 207 -~~I~~~~ldG~~~~~Lt~~~----~~~~~~------------~g~~Iy~~~~~~~-~~i~~~~~DG~~r~~l~~~~--~ 266 (302)
T 3s25_A 207 -NAIVHVNINNPNPVVLTEAN----IEHYNV------------YGSLIFYQRGGDN-PALCVVKNDGTGFKELAKGE--F 266 (302)
T ss_dssp -TEEEEECSSSCCCEECSCSC----EEEEEE------------ETTEEEEEECSSS-CEEEEEETTSCCCEEEEESC--E
T ss_pred -cEEEEEECCCCCeEEEeCCC----cceEEE------------CCCEEEEEECCCC-cEEEEEECCCCccEEeeCCc--c
Confidence 78999999999888887433 122333 7888998865544 79999999998888887653 4
Q ss_pred EEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcce
Q 004816 401 DNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLK 434 (729)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~ 434 (729)
..+...++.+++...... .||++.+++...+
T Consensus 267 ~~i~i~~d~Iy~td~~~~---~i~~~~~dGs~~~ 297 (302)
T 3s25_A 267 CNINVTSQYVYFTDFVSN---KEYCTSTQNPDTI 297 (302)
T ss_dssp EEEEECSSEEEEEETTTC---CEEEEESSSCCSC
T ss_pred ceEEEeCCEEEEEECCCC---eEEEEECCCCCce
Confidence 456666777776654332 4899988776543
No 131
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.74 E-value=8.6e-17 Score=162.86 Aligned_cols=211 Identities=13% Similarity=0.065 Sum_probs=136.3
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++.... +.|+||++||.+.+. ..|...++.|++ ||.|+++|+||.|....... .
T Consensus 11 ~~~~~~y~~~g------------~~~~vv~~HG~~~~~--~~~~~~~~~L~~-~~~vi~~d~~G~G~s~~~~~------~ 69 (278)
T 3oos_A 11 PRGKFEYFLKG------------EGPPLCVTHLYSEYN--DNGNTFANPFTD-HYSVYLVNLKGCGNSDSAKN------D 69 (278)
T ss_dssp TTEEEEEEEEC------------SSSEEEECCSSEECC--TTCCTTTGGGGG-TSEEEEECCTTSTTSCCCSS------G
T ss_pred CCceEEEEecC------------CCCeEEEEcCCCcch--HHHHHHHHHhhc-CceEEEEcCCCCCCCCCCCC------c
Confidence 67788754431 236899999985443 345666777877 99999999998765433210 0
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHh---------------
Q 004816 548 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLR--------------- 611 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~--------------- 611 (729)
.....+|+.+.+..+++. ++.+++.++|||+||.+++.++. +|++++++|+.++........
T Consensus 70 ~~~~~~~~~~~~~~~~~~--l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (278)
T 3oos_A 70 SEYSMTETIKDLEAIREA--LYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNR 147 (278)
T ss_dssp GGGSHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHH
T ss_pred ccCcHHHHHHHHHHHHHH--hCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHH
Confidence 112345555555555554 24468999999999999999998 999999999999877611000
Q ss_pred -----hhc--c--------hhhhhh----------hhhhcCC----------hh-----hhhhcCcccccCCCCCCEEEE
Q 004816 612 -----AET--H--------KFESRY----------IDNLVGS----------EK-----DYYEKSPINFVDKFSCPIILF 651 (729)
Q Consensus 612 -----~~~--~--------~~~~~~----------~~~~~~~----------~~-----~~~~~sp~~~~~~i~~PvL~i 651 (729)
... . .....+ ....... .. .+...+....+.++++|+|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 227 (278)
T 3oos_A 148 IVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIY 227 (278)
T ss_dssp HHHHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEE
T ss_pred HHHHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEE
Confidence 000 0 000000 0000000 00 111223345577899999999
Q ss_pred EeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHH
Q 004816 652 QGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVF 706 (729)
Q Consensus 652 ~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~f 706 (729)
+|++|..+|++.+.++.+.+. .+++++++++||.+.. +...++.+.+.+|
T Consensus 228 ~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~p~~~~~~i~~f 277 (278)
T 3oos_A 228 CGKHDVQCPYIFSCEIANLIP----NATLTKFEESNHNPFV-EEIDKFNQFVNDT 277 (278)
T ss_dssp EETTCSSSCHHHHHHHHHHST----TEEEEEETTCSSCHHH-HSHHHHHHHHHHT
T ss_pred EeccCCCCCHHHHHHHHhhCC----CcEEEEcCCcCCCccc-ccHHHHHHHHHhh
Confidence 999999999999988888774 5799999999997542 3445566666555
No 132
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.74 E-value=2.9e-17 Score=166.75 Aligned_cols=216 Identities=18% Similarity=0.258 Sum_probs=133.6
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHh
Q 004816 463 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 542 (729)
Q Consensus 463 ~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~ 542 (729)
+... +|.++++..+. ..|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+....
T Consensus 3 ~~~~-~g~~l~y~~~g------------~~~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~--- 64 (273)
T 1a8s_A 3 FTTR-DGTQIYYKDWG------------SGQPIVFSHGWPLN--ADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPW--- 64 (273)
T ss_dssp EECT-TSCEEEEEEES------------CSSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS---
T ss_pred EecC-CCcEEEEEEcC------------CCCEEEEECCCCCc--HHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCC---
Confidence 4454 78888755442 12679999998543 345677788999999999999999876543211
Q ss_pred hccCCCc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C-CCcceEEEEeccccCh------------
Q 004816 543 LLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F-RDTFKAGASLYGVADL------------ 607 (729)
Q Consensus 543 ~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~-~~~~~a~v~~~~~~d~------------ 607 (729)
..+.. ...+|+.++++++ +.+++.|+||||||.+++.++. + |++++++|+.++....
T Consensus 65 --~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 136 (273)
T 1a8s_A 65 --SGNDMDTYADDLAQLIEHL------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLP 136 (273)
T ss_dssp --SCCSHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBC
T ss_pred --CCCCHHHHHHHHHHHHHHh------CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCc
Confidence 11110 1134445444443 3468999999999999988665 5 9999999998863210
Q ss_pred -hHH---hhh----cchhhhhhhh-hhc-----------------------CChh-------hhhhcCcccccCCCCCCE
Q 004816 608 -SML---RAE----THKFESRYID-NLV-----------------------GSEK-------DYYEKSPINFVDKFSCPI 648 (729)
Q Consensus 608 -~~~---~~~----~~~~~~~~~~-~~~-----------------------~~~~-------~~~~~sp~~~~~~i~~Pv 648 (729)
..+ ... ...+...+.. ... .... .+...+....+.++++|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 216 (273)
T 1a8s_A 137 MEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPT 216 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCE
T ss_pred HHHHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCE
Confidence 000 000 0000000000 000 0000 011122233467889999
Q ss_pred EEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 649 ILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 649 L~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
|+++|++|..+|++...+.+..+. .++++++++++||.+. .+...++.+.+.+|+.
T Consensus 217 lii~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 217 LVVHGDADQVVPIEASGIASAALV---KGSTLKIYSGAPHGLT-DTHKDQLNADLLAFIK 272 (273)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHHS---TTCEEEEETTCCSCHH-HHTHHHHHHHHHHHHH
T ss_pred EEEECCCCccCChHHHHHHHHHhC---CCcEEEEeCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 999999999999875444433332 1458999999999764 3566788888899985
No 133
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.73 E-value=1.3e-16 Score=158.64 Aligned_cols=202 Identities=14% Similarity=0.083 Sum_probs=133.6
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhh--CCcEEEEecCCCCCC------CchhHHHh
Q 004816 471 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS--RGWAFVDVNYGGSTG------YGREFRER 542 (729)
Q Consensus 471 ~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~--~G~~v~~~d~rGs~g------~g~~~~~~ 542 (729)
.+.+.++.|.+ +..++||++||.+. ....+..+++.+.. .++.++.|+-+-... .+..|...
T Consensus 24 ~l~y~ii~P~~--------~~~~~VI~LHG~G~--~~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~ 93 (246)
T 4f21_A 24 AMNYELMEPAK--------QARFCVIWLHGLGA--DGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDI 93 (246)
T ss_dssp CCCEEEECCSS--------CCCEEEEEEEC--C--CCCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTC
T ss_pred CcCceEeCCCC--------cCCeEEEEEcCCCC--CHHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCccccccc
Confidence 35566788854 33579999999733 33445555565543 378888887431110 11222211
Q ss_pred hccC-------CCcccHHHHHH----HHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHH
Q 004816 543 LLGR-------WGIVDVNDCCS----CATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSML 610 (729)
Q Consensus 543 ~~~~-------~~~~~~~D~~~----~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~ 610 (729)
.... .-...+.+... .++...+ ..+|++||++.|+|+||.+++.++. +|+.|+++++++|.......
T Consensus 94 ~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~-~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~ 172 (246)
T 4f21_A 94 KSLDANSLNRVVDVEGINSSIAKVNKLIDSQVN-QGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDN 172 (246)
T ss_dssp CCC---CGGGGSCCC-CHHHHHHHHHHHHHHHH-C-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHH
T ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHHHH-cCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCcccc
Confidence 0000 00011222233 3333333 3589999999999999999999998 99999999999986533211
Q ss_pred hhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCccc
Q 004816 611 RAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGF 690 (729)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~ 690 (729)
... .. .....++|+|++||++|++||++.++++++.|+++|.++++++||+.||.+
T Consensus 173 ~~~--------------------~~----~~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i 228 (246)
T 4f21_A 173 FKG--------------------KI----TSINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSV 228 (246)
T ss_dssp HST--------------------TC----CGGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSC
T ss_pred ccc--------------------cc----cccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcc
Confidence 000 00 011225799999999999999999999999999999999999999999987
Q ss_pred CCcccHHHHHHHHHHHHHHHhC
Q 004816 691 RKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 691 ~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
. .+.++.+.+||++.|+
T Consensus 229 ~-----~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 229 C-----MEEIKDISNFIAKTFK 245 (246)
T ss_dssp C-----HHHHHHHHHHHHHHTT
T ss_pred C-----HHHHHHHHHHHHHHhC
Confidence 5 2456789999999885
No 134
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.73 E-value=3.3e-17 Score=166.95 Aligned_cols=211 Identities=18% Similarity=0.188 Sum_probs=135.7
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++..+. . .|.||++||.+.+ ...|...++.|+++||.|+++|+||.|.+.... ..+
T Consensus 11 ~g~~l~y~~~g-----------~-g~pvvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~-----~~~ 71 (277)
T 1brt_A 11 TSIDLYYEDHG-----------T-GQPVVLIHGFPLS--GHSWERQSAALLDAGYRVITYDRRGFGQSSQPT-----TGY 71 (277)
T ss_dssp EEEEEEEEEEC-----------S-SSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS-----SCC
T ss_pred CCcEEEEEEcC-----------C-CCeEEEECCCCCc--HHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCC-----CCc
Confidence 67777755442 1 1348999998543 355777888999999999999999876543211 111
Q ss_pred Cc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCC-cceEEEEeccccChh-------------HHh
Q 004816 548 GI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRD-TFKAGASLYGVADLS-------------MLR 611 (729)
Q Consensus 548 ~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~-~~~a~v~~~~~~d~~-------------~~~ 611 (729)
.. ...+|+.++++.+ +.+++.++||||||.+++.++. +|+ +++++|+.++..... ...
T Consensus 72 ~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 145 (277)
T 1brt_A 72 DYDTFAADLNTVLETL------DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFF 145 (277)
T ss_dssp SHHHHHHHHHHHHHHH------TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHH
T ss_pred cHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHH
Confidence 11 1245566666654 3468999999999999999888 898 999999998642110 000
Q ss_pred ----hh----cchhhhhhhhhhc------C---Chh---hh----------------h--hcCcccccCCCCCCEEEEEe
Q 004816 612 ----AE----THKFESRYIDNLV------G---SEK---DY----------------Y--EKSPINFVDKFSCPIILFQG 653 (729)
Q Consensus 612 ----~~----~~~~~~~~~~~~~------~---~~~---~~----------------~--~~sp~~~~~~i~~PvL~i~G 653 (729)
.. .......+..... . ..+ .+ . ..+....+.++++|+|+++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 225 (277)
T 1brt_A 146 DGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHG 225 (277)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEE
T ss_pred HHHHHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEec
Confidence 00 0000000000000 0 000 00 0 11222346778999999999
Q ss_pred CCCCCCChHHH-HHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 654 LEDKVVPPDQA-RKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 654 ~~D~~vp~~~~-~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
++|..+|++.+ .++.+.+. .+++++++++||... .+...++.+.+.+|+.
T Consensus 226 ~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 226 TGDRTLPIENTARVFHKALP----SAEYVEVEGAPHGLL-WTHAEEVNTALLAFLA 276 (277)
T ss_dssp TTCSSSCGGGTHHHHHHHCT----TSEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred CCCccCChHHHHHHHHHHCC----CCcEEEeCCCCcchh-hhCHHHHHHHHHHHHh
Confidence 99999999887 77777664 348999999999753 3456778888888885
No 135
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.73 E-value=8.5e-17 Score=162.89 Aligned_cols=216 Identities=13% Similarity=0.090 Sum_probs=137.6
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHh
Q 004816 463 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 542 (729)
Q Consensus 463 ~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~ 542 (729)
+... +|.++++..+.+. ..|+||++||.+.+ ...|...+..|++ +|.|+++|+||.|.+...
T Consensus 9 ~~~~-~g~~l~y~~~G~~----------~~p~lvl~hG~~~~--~~~w~~~~~~L~~-~~~vi~~D~rG~G~S~~~---- 70 (266)
T 3om8_A 9 LATS-DGASLAYRLDGAA----------EKPLLALSNSIGTT--LHMWDAQLPALTR-HFRVLRYDARGHGASSVP---- 70 (266)
T ss_dssp EECT-TSCEEEEEEESCT----------TSCEEEEECCTTCC--GGGGGGGHHHHHT-TCEEEEECCTTSTTSCCC----
T ss_pred Eecc-CCcEEEEEecCCC----------CCCEEEEeCCCccC--HHHHHHHHHHhhc-CcEEEEEcCCCCCCCCCC----
Confidence 4454 8999987766432 24789999997443 3456777777775 799999999986654321
Q ss_pred hccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChh---HHh-------
Q 004816 543 LLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLS---MLR------- 611 (729)
Q Consensus 543 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~---~~~------- 611 (729)
... ...+++.+.+..+++.- ..+++.++||||||.+++.++. +|++++++|+.++..... .+.
T Consensus 71 -~~~---~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~ 144 (266)
T 3om8_A 71 -PGP---YTLARLGEDVLELLDAL--EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVL 144 (266)
T ss_dssp -CSC---CCHHHHHHHHHHHHHHT--TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHH
T ss_pred -CCC---CCHHHHHHHHHHHHHHh--CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHH
Confidence 111 22333333333333331 3468999999999999999988 999999999987643210 000
Q ss_pred h--hcchhhhhhhhhhc------C---------------Chhh-------hhhcCcccccCCCCCCEEEEEeCCCCCCCh
Q 004816 612 A--ETHKFESRYIDNLV------G---------------SEKD-------YYEKSPINFVDKFSCPIILFQGLEDKVVPP 661 (729)
Q Consensus 612 ~--~~~~~~~~~~~~~~------~---------------~~~~-------~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~ 661 (729)
. .............+ . .... +...+....+.+|++|+|+++|++|.++|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~ 224 (266)
T 3om8_A 145 QAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAA 224 (266)
T ss_dssp HCSSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCH
T ss_pred ccccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCH
Confidence 0 00000000000000 0 0000 111122234678999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 662 DQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 662 ~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
+.++.+.+.+.. .++++++ +||.. ..+...++.+.+.+|+.
T Consensus 225 ~~~~~l~~~ip~----a~~~~i~-~gH~~-~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 225 SHGELIAASIAG----ARLVTLP-AVHLS-NVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp HHHHHHHHHSTT----CEEEEES-CCSCH-HHHCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCC----CEEEEeC-CCCCc-cccCHHHHHHHHHHHhc
Confidence 999998888763 4888887 79964 44666778888888874
No 136
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.73 E-value=1.5e-16 Score=161.31 Aligned_cols=205 Identities=10% Similarity=0.116 Sum_probs=135.6
Q ss_pred CCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCC
Q 004816 491 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 570 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 570 (729)
..|+||++||.+.+ ...|......|++ +|.|+++|+||.|.+.... ......+++.+.+..+++.. +.
T Consensus 14 ~~~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~-------~~~~~~~~~a~dl~~~l~~l--~~ 81 (268)
T 3v48_A 14 DAPVVVLISGLGGS--GSYWLPQLAVLEQ-EYQVVCYDQRGTGNNPDTL-------AEDYSIAQMAAELHQALVAA--GI 81 (268)
T ss_dssp TCCEEEEECCTTCC--GGGGHHHHHHHHT-TSEEEECCCTTBTTBCCCC-------CTTCCHHHHHHHHHHHHHHT--TC
T ss_pred CCCEEEEeCCCCcc--HHHHHHHHHHHhh-cCeEEEECCCCCCCCCCCc-------cccCCHHHHHHHHHHHHHHc--CC
Confidence 45789999998544 3456777777755 6999999999766432210 01123555555555555542 34
Q ss_pred CcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhh-------------cchhh---------hhhhhh---
Q 004816 571 KRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAE-------------THKFE---------SRYIDN--- 624 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~-------------~~~~~---------~~~~~~--- 624 (729)
+++.++||||||.+++.++. +|++++++|+.++.......... ...+. ..+...
T Consensus 82 ~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (268)
T 3v48_A 82 EHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAP 161 (268)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTHH
T ss_pred CCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcccc
Confidence 68999999999999999988 99999999998875432110000 00000 000000
Q ss_pred -h----------cCCh-------hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCC
Q 004816 625 -L----------VGSE-------KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGE 686 (729)
Q Consensus 625 -~----------~~~~-------~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 686 (729)
. .... ..+...+....+.+|++|+|+++|++|..+|++.+.++.+.+. ..++++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p----~~~~~~~~~~ 237 (268)
T 3v48_A 162 RLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALP----DSQKMVMPYG 237 (268)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCS----SEEEEEESSC
T ss_pred cchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCC----cCeEEEeCCC
Confidence 0 0000 0111122234567899999999999999999999988888765 5689999999
Q ss_pred CcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 687 QHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 687 gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
||.. ..+....+.+.+.+|+.+.+.
T Consensus 238 GH~~-~~e~p~~~~~~i~~fl~~~~~ 262 (268)
T 3v48_A 238 GHAC-NVTDPETFNALLLNGLASLLH 262 (268)
T ss_dssp CTTH-HHHCHHHHHHHHHHHHHHHHH
T ss_pred Ccch-hhcCHHHHHHHHHHHHHHhcc
Confidence 9964 446677888999999988653
No 137
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.73 E-value=2.5e-17 Score=177.14 Aligned_cols=238 Identities=17% Similarity=0.114 Sum_probs=151.2
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHh----hCCc---EEEEecCCCCCCC
Q 004816 463 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWT----SRGW---AFVDVNYGGSTGY 535 (729)
Q Consensus 463 ~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la----~~G~---~v~~~d~rGs~g~ 535 (729)
+... +|.++++..+.|.+... .++.++.|+||++||.+.. ...|...+..|+ ..|| .|+++|+||.
T Consensus 25 ~~~~-dg~~l~~~~~g~~~~~~-~~~~~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~--- 97 (398)
T 2y6u_A 25 LCAT-DRLELTYDVYTSAERQR-RSRTATRLNLVFLHGSGMS--KVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNH--- 97 (398)
T ss_dssp SSTT-CCCEEEEEEEEESCTTT-CCTTCEEEEEEEECCTTCC--GGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTS---
T ss_pred ccCC-CceEEEEEEEecCCCCC-CCCCCCCCeEEEEcCCCCc--HHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCC---
Confidence 4455 89999999998754100 0012334899999998544 345667778887 4489 9999999964
Q ss_pred chhHHHhhc---cCCCc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhH-
Q 004816 536 GREFRERLL---GRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSM- 609 (729)
Q Consensus 536 g~~~~~~~~---~~~~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~- 609 (729)
|.+...... ..+.. ...+|+.++++.+.....+++.+++|+||||||.+++.++. +|++++++|+.+|......
T Consensus 98 G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 177 (398)
T 2y6u_A 98 GDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKA 177 (398)
T ss_dssp HHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCC
T ss_pred CCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccc
Confidence 444322111 01110 12455555555443211234445999999999999999988 9999999999998655310
Q ss_pred ------------------Hhhh----c-chh-----hhhhhhh-h-cC--Chh---hhh---------------------
Q 004816 610 ------------------LRAE----T-HKF-----ESRYIDN-L-VG--SEK---DYY--------------------- 633 (729)
Q Consensus 610 ------------------~~~~----~-~~~-----~~~~~~~-~-~~--~~~---~~~--------------------- 633 (729)
+... . ..+ ...++.. . .. +++ .+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T 2y6u_A 178 IGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKM 257 (398)
T ss_dssp CSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESS
T ss_pred cccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecC
Confidence 0000 0 000 0000000 0 00 000 000
Q ss_pred ---------------hcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHH
Q 004816 634 ---------------EKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKF 698 (729)
Q Consensus 634 ---------------~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~ 698 (729)
..+....+.++++|+|+++|++|.++|++.+.++++.+. .+++++++++||.+.. +...+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~----~~~~~~~~~~gH~~~~-e~p~~ 332 (398)
T 2y6u_A 258 EQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQ----NYHLDVIPGGSHLVNV-EAPDL 332 (398)
T ss_dssp CHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCS----SEEEEEETTCCTTHHH-HSHHH
T ss_pred CchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCC----CceEEEeCCCCccchh-cCHHH
Confidence 001123467889999999999999999998888877764 5799999999997543 45678
Q ss_pred HHHHHHHHHHHHhC
Q 004816 699 TLEQQMVFFARVVG 712 (729)
Q Consensus 699 ~~~~~~~fl~~~l~ 712 (729)
+.+.+.+||.+++.
T Consensus 333 ~~~~i~~fl~~~~~ 346 (398)
T 2y6u_A 333 VIERINHHIHEFVL 346 (398)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88999999999886
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=2.6e-16 Score=160.77 Aligned_cols=233 Identities=10% Similarity=0.023 Sum_probs=169.1
Q ss_pred CCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCC-CceEEeeeCC-
Q 004816 163 KDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-QNIQVLVSGS- 240 (729)
Q Consensus 163 ~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~-g~~~~lt~~~- 240 (729)
.++.|+++|+.+ ++.+++... ...+..++|||||++|++..+ ..|+++|+++ ++.+.+..+.
T Consensus 20 ~~~~i~~~d~~~--~~~~~~~~~----~~~v~~~~~spdg~~l~~~~~----------~~i~~~d~~~~~~~~~~~~~~~ 83 (297)
T 2ojh_A 20 MRSSIEIFNIRT--RKMRVVWQT----PELFEAPNWSPDGKYLLLNSE----------GLLYRLSLAGDPSPEKVDTGFA 83 (297)
T ss_dssp CCEEEEEEETTT--TEEEEEEEE----SSCCEEEEECTTSSEEEEEET----------TEEEEEESSSCCSCEECCCTTC
T ss_pred cceeEEEEeCCC--CceeeeccC----CcceEeeEECCCCCEEEEEcC----------CeEEEEeCCCCCCceEeccccc
Confidence 345899999987 776666654 244678899999999888642 4699999999 8888877544
Q ss_pred -CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecC
Q 004816 241 -DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRK 318 (729)
Q Consensus 241 -~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~ 318 (729)
.....++|||||++|++...+.. ....||.+++. ++.. ..+.... ....+.|+|||+ +++....
T Consensus 84 ~~~~~~~~~spdg~~l~~~~~~~~----~~~~l~~~~~~-~~~~---~~~~~~~-----~~~~~~~spdg~~l~~~~~~- 149 (297)
T 2ojh_A 84 TICNNDHGISPDGALYAISDKVEF----GKSAIYLLPST-GGTP---RLMTKNL-----PSYWHGWSPDGKSFTYCGIR- 149 (297)
T ss_dssp CCBCSCCEECTTSSEEEEEECTTT----SSCEEEEEETT-CCCC---EECCSSS-----SEEEEEECTTSSEEEEEEEE-
T ss_pred cccccceEECCCCCEEEEEEeCCC----CcceEEEEECC-CCce---EEeecCC-----CccceEECCCCCEEEEEECC-
Confidence 45667899999999999884432 24679999987 5543 2333322 245678999999 7777766
Q ss_pred CCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccCCc
Q 004816 319 NGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFT 398 (729)
Q Consensus 319 ~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~~~ 398 (729)
.+...||.++..+++.+.+...........|++ +++.+++.+..++..+||.++..++..+.++....
T Consensus 150 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~------------dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 217 (297)
T 2ojh_A 150 DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSP------------DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY 217 (297)
T ss_dssp TTEEEEEEEETTTCCEEECCCSSSCEEEEEECT------------TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE
T ss_pred CCceEEEEEECCCCcceEcccCCCccccceECC------------CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc
Confidence 677899999998888887775544444555654 77788888777888999999988888888887665
Q ss_pred ceEEe--eeeCCEEEEEEeCCC-------CCceEEEEEcCCCcceeee
Q 004816 399 DIDNI--TLGNDCLFVEGASGV-------EPSSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 399 ~v~~~--~~~~~~~~~~~~~~~-------~~~~ly~~d~~~~~~~~lt 437 (729)
.+..+ +++++.+++...... ....|+++++++++.+++.
T Consensus 218 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 218 GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 55555 445555555554332 2256999999988766554
No 139
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.73 E-value=1.4e-16 Score=160.04 Aligned_cols=210 Identities=14% Similarity=0.087 Sum_probs=138.6
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHh
Q 004816 463 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 542 (729)
Q Consensus 463 ~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~ 542 (729)
+... +|.++.+..+.+ .|.||++||.+.+. ..|...++.|+ +||.|+++|+||.|.....
T Consensus 7 ~~~~-~g~~l~~~~~g~------------~~~vv~lHG~~~~~--~~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~---- 66 (262)
T 3r0v_A 7 VPSS-DGTPIAFERSGS------------GPPVVLVGGALSTR--AGGAPLAERLA-PHFTVICYDRRGRGDSGDT---- 66 (262)
T ss_dssp EECT-TSCEEEEEEEEC------------SSEEEEECCTTCCG--GGGHHHHHHHT-TTSEEEEECCTTSTTCCCC----
T ss_pred EEcC-CCcEEEEEEcCC------------CCcEEEECCCCcCh--HHHHHHHHHHh-cCcEEEEEecCCCcCCCCC----
Confidence 4444 888888665421 36799999985443 45677778887 8999999999987654332
Q ss_pred hccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHH--------hhh
Q 004816 543 LLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSML--------RAE 613 (729)
Q Consensus 543 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~--------~~~ 613 (729)
. ....+|+...+..+++. ++ +++.++|||+||.+++.++. +| +++++|+.+|....... ...
T Consensus 67 --~---~~~~~~~~~~~~~~~~~--l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 137 (262)
T 3r0v_A 67 --P---PYAVEREIEDLAAIIDA--AG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTR 137 (262)
T ss_dssp --S---SCCHHHHHHHHHHHHHH--TT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHH
T ss_pred --C---CCCHHHHHHHHHHHHHh--cC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHH
Confidence 0 12345555444444444 23 78999999999999999998 88 99999999886543211 000
Q ss_pred ---------cchhhhhhhhhhcC-Ch---hhh------------------------hhcCcccccCCCCCCEEEEEeCCC
Q 004816 614 ---------THKFESRYIDNLVG-SE---KDY------------------------YEKSPINFVDKFSCPIILFQGLED 656 (729)
Q Consensus 614 ---------~~~~~~~~~~~~~~-~~---~~~------------------------~~~sp~~~~~~i~~PvL~i~G~~D 656 (729)
.......+.....+ .. +.+ ....+...+.++++|+|+++|++|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 217 (262)
T 3r0v_A 138 LDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGAS 217 (262)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTC
T ss_pred HHHHhhccchhhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCC
Confidence 00000011111000 00 000 011234557788999999999999
Q ss_pred CCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 657 KVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 657 ~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
..+|++.+.++.+.+. .+++++++++|| + +...++.+.+.+|+++
T Consensus 218 ~~~~~~~~~~~~~~~~----~~~~~~~~~~gH-~---~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 218 PAWIRHTAQELADTIP----NARYVTLENQTH-T---VAPDAIAPVLVEFFTR 262 (262)
T ss_dssp CHHHHHHHHHHHHHST----TEEEEECCCSSS-S---CCHHHHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHhCC----CCeEEEecCCCc-c---cCHHHHHHHHHHHHhC
Confidence 9999998888887764 469999999999 3 3556788888888753
No 140
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.73 E-value=1.1e-16 Score=162.46 Aligned_cols=206 Identities=11% Similarity=0.058 Sum_probs=135.3
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchh
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE 538 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~ 538 (729)
++..+.. +|.++.+..+.+.+ .|+||++||.+.+ ...|...+..|+++||.|+++|+||.|.....
T Consensus 5 ~~~~~~~--~g~~l~~~~~g~~~----------~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~ 70 (286)
T 3qit_A 5 EEKFLEF--GGNQICLCSWGSPE----------HPVVLCIHGILEQ--GLAWQEVALPLAAQGYRVVAPDLFGHGRSSHL 70 (286)
T ss_dssp EEEEEEE--TTEEEEEEEESCTT----------SCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC
T ss_pred hhheeec--CCceEEEeecCCCC----------CCEEEEECCCCcc--cchHHHHHHHhhhcCeEEEEECCCCCCCCCCC
Confidence 4445555 79999988886532 4789999998544 34567788999999999999999987654332
Q ss_pred HHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHh------
Q 004816 539 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLR------ 611 (729)
Q Consensus 539 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~------ 611 (729)
.. ......++..+.+..+++. ++.+++.++|||+||++++.++. +|++++++|+.++........
T Consensus 71 ~~------~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 142 (286)
T 3qit_A 71 EM------VTSYSSLTFLAQIDRVIQE--LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVN 142 (286)
T ss_dssp SS------GGGCSHHHHHHHHHHHHHH--SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHH
T ss_pred CC------CCCcCHHHHHHHHHHHHHh--cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhH
Confidence 10 0112345555555555554 24478999999999999999998 999999999999865422111
Q ss_pred ---hh------c--------------------chhhhh----hhhhhcC----------Chh-------hh-----hhcC
Q 004816 612 ---AE------T--------------------HKFESR----YIDNLVG----------SEK-------DY-----YEKS 636 (729)
Q Consensus 612 ---~~------~--------------------~~~~~~----~~~~~~~----------~~~-------~~-----~~~s 636 (729)
.. . ...... +...... +.. .+ ...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T 3qit_A 143 QLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQ 222 (286)
T ss_dssp HHHHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHH
T ss_pred HHHHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhH
Confidence 00 0 000000 0000000 000 00 1112
Q ss_pred cccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccC
Q 004816 637 PINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFR 691 (729)
Q Consensus 637 p~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~ 691 (729)
....+.++++|+|+++|++|.++|++...++.+.+. .++++++++ ||.+.
T Consensus 223 ~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~g-gH~~~ 272 (286)
T 3qit_A 223 YLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMT----QAKRVFLSG-GHNLH 272 (286)
T ss_dssp HHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHST----TSEEEEESS-SSCHH
T ss_pred HHHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHCC----CCeEEEeeC-CchHh
Confidence 223356789999999999999999999888877765 348999999 99753
No 141
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.73 E-value=8.1e-17 Score=161.52 Aligned_cols=204 Identities=15% Similarity=0.096 Sum_probs=133.4
Q ss_pred CEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCc
Q 004816 493 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 572 (729)
Q Consensus 493 P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 572 (729)
|+||++||.+.+ ...|...++.|+++||.|+++|+||.|.+..... .....++....+..+++.... .++
T Consensus 5 ~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~l~~~l~~l~~-~~~ 74 (258)
T 3dqz_A 5 HHFVLVHNAYHG--AWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQ-------AVETVDEYSKPLIETLKSLPE-NEE 74 (258)
T ss_dssp CEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCGG-------GCCSHHHHHHHHHHHHHTSCT-TCC
T ss_pred CcEEEECCCCCc--cccHHHHHHHHHhCCCEEEEecCCCCcCCCCCCC-------ccccHHHhHHHHHHHHHHhcc-cCc
Confidence 889999998544 3456778899999999999999998765443211 112344444444444444222 378
Q ss_pred EEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhH-----Hhhhc----chh--------------------hhhhh
Q 004816 573 LCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSM-----LRAET----HKF--------------------ESRYI 622 (729)
Q Consensus 573 i~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~-----~~~~~----~~~--------------------~~~~~ 622 (729)
+.|+|||+||.+++.++. +|++++++|+.++...... ..... ..+ .....
T Consensus 75 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T 3dqz_A 75 VILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFM 154 (258)
T ss_dssp EEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHH
T ss_pred eEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHH
Confidence 999999999999999998 9999999999988542110 00000 000 00000
Q ss_pred hh-hcC--Chh-----------------hhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEE
Q 004816 623 DN-LVG--SEK-----------------DYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVE 682 (729)
Q Consensus 623 ~~-~~~--~~~-----------------~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 682 (729)
.. ... ..+ .+............++|+|+++|++|..+|++.+.++.+.+.. +++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~ 230 (258)
T 3dqz_A 155 KARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNV----SKVYE 230 (258)
T ss_dssp HHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCC----SCEEE
T ss_pred HHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhCCc----ccEEE
Confidence 00 000 000 0000122222233368999999999999999999888887753 38999
Q ss_pred ECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 683 YEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 683 ~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
++++||.... +...++.+.+.+|+++++
T Consensus 231 ~~~~gH~~~~-~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 231 IDGGDHMVML-SKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp ETTCCSCHHH-HSHHHHHHHHHHHHHHTC
T ss_pred cCCCCCchhh-cChHHHHHHHHHHHHHhC
Confidence 9999997543 567788899999998874
No 142
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.72 E-value=1.3e-16 Score=179.30 Aligned_cols=232 Identities=13% Similarity=0.064 Sum_probs=151.1
Q ss_pred CCCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCC
Q 004816 454 YFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGST 533 (729)
Q Consensus 454 ~~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~ 533 (729)
.....+...+... +|.++++.... +.|+||++||++.+. ..|...++.|+++||.|+++|+||.|
T Consensus 233 ~~~~~~~~~~~~~-dg~~l~~~~~g------------~~p~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~D~~G~G 297 (555)
T 3i28_A 233 NPSDMSHGYVTVK-PRVRLHFVELG------------SGPAVCLCHGFPESW--YSWRYQIPALAQAGYRVLAMDMKGYG 297 (555)
T ss_dssp CGGGSEEEEEEEE-TTEEEEEEEEC------------SSSEEEEECCTTCCG--GGGTTHHHHHHHTTCEEEEECCTTST
T ss_pred CCcccceeEEEeC-CCcEEEEEEcC------------CCCEEEEEeCCCCch--hHHHHHHHHHHhCCCEEEEecCCCCC
Confidence 3445566777776 89999865542 237899999985443 45677888999999999999999876
Q ss_pred CCchhHHHhhccCCCcc-cHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhH--
Q 004816 534 GYGREFRERLLGRWGIV-DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSM-- 609 (729)
Q Consensus 534 g~g~~~~~~~~~~~~~~-~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~-- 609 (729)
.+.... ....+... ..+|+.++++.+ +.+++.++|||+||.+++.++. +|++++++|+.++......
T Consensus 298 ~S~~~~---~~~~~~~~~~~~d~~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 368 (555)
T 3i28_A 298 ESSAPP---EIEEYCMEVLCKEMVTFLDKL------GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPN 368 (555)
T ss_dssp TSCCCS---CGGGGSHHHHHHHHHHHHHHH------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTT
T ss_pred CCCCCC---CcccccHHHHHHHHHHHHHHc------CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcc
Confidence 543321 00111111 134555555554 3468999999999999999998 9999999999887532100
Q ss_pred ------H-----------hhhc-------chhhhhhhhhhcC--------------------------------Ch---h
Q 004816 610 ------L-----------RAET-------HKFESRYIDNLVG--------------------------------SE---K 630 (729)
Q Consensus 610 ------~-----------~~~~-------~~~~~~~~~~~~~--------------------------------~~---~ 630 (729)
. .... ............. .. .
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (555)
T 3i28_A 369 MSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQ 448 (555)
T ss_dssp SCHHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHH
T ss_pred cchHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHH
Confidence 0 0000 0000000000000 00 0
Q ss_pred hh----------------------hhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCc
Q 004816 631 DY----------------------YEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQH 688 (729)
Q Consensus 631 ~~----------------------~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH 688 (729)
.| ...+....+.++++|+|+++|++|.++|++.+..+++.+. .+++++++++||
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH 524 (555)
T 3i28_A 449 FYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP----HLKRGHIEDCGH 524 (555)
T ss_dssp HHHHHHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT----TCEEEEETTCCS
T ss_pred HHHHHHhcccchhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCC----CceEEEeCCCCC
Confidence 00 0011223356889999999999999999988888776664 458999999999
Q ss_pred ccCCcccHHHHHHHHHHHHHHHhCCC
Q 004816 689 GFRKAENIKFTLEQQMVFFARVVGHF 714 (729)
Q Consensus 689 ~~~~~~~~~~~~~~~~~fl~~~l~~~ 714 (729)
.... +...++.+.+.+||.+.....
T Consensus 525 ~~~~-e~p~~~~~~i~~fl~~~~~~~ 549 (555)
T 3i28_A 525 WTQM-DKPTEVNQILIKWLDSDARNP 549 (555)
T ss_dssp CHHH-HSHHHHHHHHHHHHHHHTCC-
T ss_pred Ccch-hCHHHHHHHHHHHHHhccCCC
Confidence 7533 556788899999999988743
No 143
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.72 E-value=1.5e-16 Score=166.49 Aligned_cols=229 Identities=15% Similarity=0.168 Sum_probs=141.0
Q ss_pred EEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhh-CCcEEEEecCCCCCCCchh
Q 004816 460 LIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGSTGYGRE 538 (729)
Q Consensus 460 ~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~-~G~~v~~~d~rGs~g~g~~ 538 (729)
...+.. +|.++++..+.+.+. +.+.+.||++||++++.. .|...+..|+. .||.|+++|+||.|.+...
T Consensus 30 ~~~v~~--~g~~l~y~~~G~~~~------~~~g~plvllHG~~~~~~--~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~ 99 (330)
T 3nwo_A 30 SRTVPF--GDHETWVQVTTPENA------QPHALPLIVLHGGPGMAH--NYVANIAALADETGRTVIHYDQVGCGNSTHL 99 (330)
T ss_dssp EEEEEE--TTEEEEEEEECCSSC------CTTCCCEEEECCTTTCCS--GGGGGGGGHHHHHTCCEEEECCTTSTTSCCC
T ss_pred ceeEee--cCcEEEEEEecCccC------CCCCCcEEEECCCCCCch--hHHHHHHHhccccCcEEEEECCCCCCCCCCC
Confidence 334444 789999888876320 111124788899865543 34445566765 6999999999987655321
Q ss_pred HHHhhccCCCc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhh---
Q 004816 539 FRERLLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAE--- 613 (729)
Q Consensus 539 ~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~--- 613 (729)
-.. ....+.. ...+|+.+.++.+ +.+++.|+||||||++++.++. +|++++++|+.++......+...
T Consensus 100 ~~~-~~~~~~~~~~a~dl~~ll~~l------g~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 172 (330)
T 3nwo_A 100 PDA-PADFWTPQLFVDEFHAVCTAL------GIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGD 172 (330)
T ss_dssp TTS-CGGGCCHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHH
T ss_pred CCC-ccccccHHHHHHHHHHHHHHc------CCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHH
Confidence 000 0001111 1245666666655 2368999999999999999998 99999999998875443211000
Q ss_pred ----cc-------------------hh---hhhhhhhhcC------------------Chhhh---------------hh
Q 004816 614 ----TH-------------------KF---ESRYIDNLVG------------------SEKDY---------------YE 634 (729)
Q Consensus 614 ----~~-------------------~~---~~~~~~~~~~------------------~~~~~---------------~~ 634 (729)
.. .+ ...+...... ++..| ..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (330)
T 3nwo_A 173 LRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGD 252 (330)
T ss_dssp HHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGG
T ss_pred HHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccC
Confidence 00 00 0000000000 00001 01
Q ss_pred cCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 635 KSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 635 ~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
.+....+.+|++|+|+++|++|.++| ..+.++.+.+. .++++++|++||... .+...++.+.+.+||.++-
T Consensus 253 ~~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~ip----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~FL~~~~ 323 (330)
T 3nwo_A 253 WSVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHIP----DVRSHVFPGTSHCTH-LEKPEEFRAVVAQFLHQHD 323 (330)
T ss_dssp CBCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHCS----SEEEEEETTCCTTHH-HHSHHHHHHHHHHHHHHHH
T ss_pred CchhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhCC----CCcEEEeCCCCCchh-hcCHHHHHHHHHHHHHhcc
Confidence 12234467789999999999999775 45666655543 679999999999653 3566788899999998864
No 144
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.72 E-value=1.2e-16 Score=171.42 Aligned_cols=251 Identities=11% Similarity=0.124 Sum_probs=168.6
Q ss_pred CceEEEECCEEEEEECCC--CcEEEEeCCCCCCCCeecCCCCCCCceee-ecceecCCCCEEEEEEeccCCCCCCcceEE
Q 004816 147 GGAFRIFGDTVIFSNYKD--QRLYKHSIDSKDSSPLPITPDYGEPLVSY-ADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (729)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~--~~l~~~d~~~~~~~~~~lt~~~~~~~~~~-~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l 223 (729)
...|+++++.|+|....+ .+||++++++ ++.++++... ... ..+.|||||++|+|+..+ .+|
T Consensus 40 ~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~--~~~~~l~~~~----~~~~~~~~~spdg~~l~~~~~~---------~~l 104 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDFDGNRNYYLLNLET--QQAVQLTEGK----GDNTFGGFISTDERAFFYVKNE---------LNL 104 (396)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTT--TEEEECCCSS----CBCTTTCEECTTSSEEEEEETT---------TEE
T ss_pred cCcCCCCCCEEEEEEecCCCceEEEEECCC--CcEEEeecCC----CCccccceECCCCCEEEEEEcC---------CcE
Confidence 345777788899987653 3899999998 8888888652 222 337899999999999764 369
Q ss_pred EEEEcCCCceEEeeeCCC-eeee-------------------eeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe
Q 004816 224 VAIALNGQNIQVLVSGSD-FYAF-------------------PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV 283 (729)
Q Consensus 224 ~~~dl~~g~~~~lt~~~~-~~~~-------------------~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~ 283 (729)
|++++++++.++++.... +... +.|||||++|++....... ....|+++|++ +++.
T Consensus 105 ~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~---~~~~l~~~d~~-~g~~ 180 (396)
T 3c5m_A 105 MKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTN---PTCRLIKVDIE-TGEL 180 (396)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTC---CCEEEEEEETT-TCCE
T ss_pred EEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCC---CcceEEEEECC-CCcE
Confidence 999999999888876332 2111 4677777776655311111 34679999998 6765
Q ss_pred eeeEEecCCCCCccccccCceeCC-CCc-EEEEEecCCC---ceEEEEEEcCCCeEEEeeccC--ccccCCcccccCcce
Q 004816 284 YKRVCVAGFDPTIVESPTEPKWSS-KGE-LFFVTDRKNG---FWNLHKWIESNNEVLAIYSLD--AEFSRPLWVFGINSY 356 (729)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~wsp-DG~-l~~~~~~~~g---~~~l~~~d~~~g~~~~l~~~~--~~~~~~~w~~~~~~~ 356 (729)
.. +... . ..+..+.|+| ||+ |+|.+.. .. ...|+++|+++++.+.++... ..+..+.|++
T Consensus 181 ~~--~~~~-~----~~~~~~~~sp~dg~~l~~~~~~-~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp----- 247 (396)
T 3c5m_A 181 EV--IHQD-T----AWLGHPIYRPFDDSTVGFCHEG-PHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIP----- 247 (396)
T ss_dssp EE--EEEE-S----SCEEEEEEETTEEEEEEEEECS-CSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECT-----
T ss_pred Ee--eccC-C----cccccceECCCCCCEEEEEecC-CCCCCCceEEEEECCCCceeEeeccCCCccccceEECC-----
Confidence 32 3322 2 3456789999 888 8888753 22 167999999888877776421 1233345554
Q ss_pred eeeeecCCCCEEEEEEEECCeEE--EEEEECCCCceEeeccCCcceEEeee-eCCEEEEEEeCC-------------CCC
Q 004816 357 EIIQSHGEKNLIACSYRQNGRSY--LGILDDFGHSLSLLDIPFTDIDNITL-GNDCLFVEGASG-------------VEP 420 (729)
Q Consensus 357 ~~l~~~~~~~~l~~~s~~~g~~~--ly~~d~~~g~~~~lt~~~~~v~~~~~-~~~~~~~~~~~~-------------~~~ 420 (729)
+++.|++.+...+... ||++++++++.+.++........+++ +++ ++++.++. ...
T Consensus 248 -------dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~s~~dg~-~l~~~~~~~p~~~~~~~~~~~~~~ 319 (396)
T 3c5m_A 248 -------DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDGS-LMVGDGCDAPVDVADADSYNIEND 319 (396)
T ss_dssp -------TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEEEEEECSSSS-EEEEEECCC----------CCCCC
T ss_pred -------CCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCCCCccCCCCc-eEEEecCCcceeeccccccccCCC
Confidence 7888888888776644 99999999988877643221122245 555 55544432 123
Q ss_pred ceEEEEEcCCCcceeee
Q 004816 421 SSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 421 ~~ly~~d~~~~~~~~lt 437 (729)
..||++|+++++.++|+
T Consensus 320 ~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 320 PFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp CEEEEEETTTTBCCEEE
T ss_pred CcEEEEecccCceEEcc
Confidence 67999999998876665
No 145
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.72 E-value=6.5e-17 Score=164.14 Aligned_cols=207 Identities=12% Similarity=0.120 Sum_probs=135.9
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
.|+||++||.+.. ...|...++.|++ ||.|+++|+||.|........ .......++....+..+++.. +.+
T Consensus 28 ~~~vv~lHG~~~~--~~~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~ 98 (282)
T 3qvm_A 28 EKTVLLAHGFGCD--QNMWRFMLPELEK-QFTVIVFDYVGSGQSDLESFS----TKRYSSLEGYAKDVEEILVAL--DLV 98 (282)
T ss_dssp SCEEEEECCTTCC--GGGGTTTHHHHHT-TSEEEECCCTTSTTSCGGGCC----TTGGGSHHHHHHHHHHHHHHT--TCC
T ss_pred CCeEEEECCCCCC--cchHHHHHHHHhc-CceEEEEecCCCCCCCCCCCC----ccccccHHHHHHHHHHHHHHc--CCC
Confidence 3899999997544 3456677788877 999999999987665433110 001113455555454444442 347
Q ss_pred cEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHh----------------h----hcchhhhhhhhhhcC---
Q 004816 572 RLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLR----------------A----ETHKFESRYIDNLVG--- 627 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~----------------~----~~~~~~~~~~~~~~~--- 627 (729)
++.++|||+||.+++.++. +|++++++|+.+|........ . ....+...+......
T Consensus 99 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T 3qvm_A 99 NVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASH 178 (282)
T ss_dssp SEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTS
T ss_pred ceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCcc
Confidence 9999999999999999988 899999999999865321100 0 000000000000000
Q ss_pred ---------------Ch-------hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECC
Q 004816 628 ---------------SE-------KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEG 685 (729)
Q Consensus 628 ---------------~~-------~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 685 (729)
.. ..+...+....+.++++|+|+++|++|..+|++.+.++.+.+. .++++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~ 254 (282)
T 3qvm_A 179 SSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIP----NSQLELIQA 254 (282)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSS----SEEEEEEEE
T ss_pred chhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCC----CCcEEEecC
Confidence 00 0111123335567889999999999999999999988887764 569999999
Q ss_pred CCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 686 EQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 686 ~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
+||.+.. +...++.+.+.+|+.++..
T Consensus 255 ~gH~~~~-~~~~~~~~~i~~fl~~~~~ 280 (282)
T 3qvm_A 255 EGHCLHM-TDAGLITPLLIHFIQNNQT 280 (282)
T ss_dssp ESSCHHH-HCHHHHHHHHHHHHHHC--
T ss_pred CCCcccc-cCHHHHHHHHHHHHHhcCC
Confidence 9998643 4567888899999987643
No 146
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.72 E-value=2.3e-16 Score=161.86 Aligned_cols=218 Identities=17% Similarity=0.189 Sum_probs=135.9
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++..+.+ +.+.|.||++||++++... .+.. ...++++||.|+++|+||.|.+.... ...+
T Consensus 13 ~g~~l~~~~~g~---------~~~~~~vvllHG~~~~~~~-~~~~-~~~l~~~g~~vi~~D~~G~G~S~~~~----~~~~ 77 (293)
T 1mtz_A 13 NGIYIYYKLCKA---------PEEKAKLMTMHGGPGMSHD-YLLS-LRDMTKEGITVLFYDQFGCGRSEEPD----QSKF 77 (293)
T ss_dssp TTEEEEEEEECC---------SSCSEEEEEECCTTTCCSG-GGGG-GGGGGGGTEEEEEECCTTSTTSCCCC----GGGC
T ss_pred CCEEEEEEEECC---------CCCCCeEEEEeCCCCcchh-HHHH-HHHHHhcCcEEEEecCCCCccCCCCC----CCcc
Confidence 688887666543 1123679999997544322 2333 34456789999999999876543321 0011
Q ss_pred Cc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhh-------cch--
Q 004816 548 GI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAE-------THK-- 616 (729)
Q Consensus 548 ~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~-------~~~-- 616 (729)
.. ...+|+.++++.+. +.+++.|+||||||.+++.++. +|++++++|+.++......+... ...
T Consensus 78 ~~~~~~~dl~~~~~~l~-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (293)
T 1mtz_A 78 TIDYGVEEAEALRSKLF-----GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKY 152 (293)
T ss_dssp SHHHHHHHHHHHHHHHH-----TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHH
T ss_pred cHHHHHHHHHHHHHHhc-----CCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHH
Confidence 11 11455555555542 2258999999999999999988 89999999999987653211100 000
Q ss_pred -----------------hh---hhhhhhhc----CChh-------------hhh---------------hcCcccccCCC
Q 004816 617 -----------------FE---SRYIDNLV----GSEK-------------DYY---------------EKSPINFVDKF 644 (729)
Q Consensus 617 -----------------~~---~~~~~~~~----~~~~-------------~~~---------------~~sp~~~~~~i 644 (729)
+. ..+..... ..++ .+. ..+....+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 232 (293)
T 1mtz_A 153 RDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAI 232 (293)
T ss_dssp HHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGC
T ss_pred HHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccC
Confidence 00 00000000 0000 000 01122345678
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 645 SCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 645 ~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
++|+|+++|++| .+++..+.++.+.+. .+++++++++||.... +...++.+.+.+|+.+++
T Consensus 233 ~~P~lii~G~~D-~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~l 293 (293)
T 1mtz_A 233 KIPTLITVGEYD-EVTPNVARVIHEKIA----GSELHVFRDCSHLTMW-EDREGYNKLLSDFILKHL 293 (293)
T ss_dssp CSCEEEEEETTC-SSCHHHHHHHHHHST----TCEEEEETTCCSCHHH-HSHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEeeCCC-CCCHHHHHHHHHhCC----CceEEEeCCCCCCccc-cCHHHHHHHHHHHHHhcC
Confidence 899999999999 778888887777664 4589999999997533 456788888999997653
No 147
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.72 E-value=9e-17 Score=154.23 Aligned_cols=181 Identities=12% Similarity=0.030 Sum_probs=122.8
Q ss_pred CCCEEEEEcCCCCCCc-cccchh-hhHHHhhC-CcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCC
Q 004816 491 KPPLLVKSHGGPTSEA-RGILNL-SIQYWTSR-GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 567 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~-~~~~~~-~~~~la~~-G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 567 (729)
+.|+||++||.+++.. ...|.. ....|+++ ||.|+++|+||... .++...++.+.+...
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~------------------~~~~~~~~~~~~~l~ 64 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT------------------ARESIWLPFMETELH 64 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT------------------CCHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc------------------ccHHHHHHHHHHHhC
Confidence 4589999999865532 233443 67888888 99999999997321 123333444444422
Q ss_pred CCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCC
Q 004816 568 ADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSC 646 (729)
Q Consensus 568 ~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~ 646 (729)
+ .+++.++|||+||.+++.++. +| ++++|+.+|......... .........+ .....+..+.+
T Consensus 65 ~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~-------~~~~~~~~~~------~~~~~~~~~~~ 128 (194)
T 2qs9_A 65 C-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN-------ERASGYFTRP------WQWEKIKANCP 128 (194)
T ss_dssp C-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH-------HHHTSTTSSC------CCHHHHHHHCS
T ss_pred c-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhh-------hHHHhhhccc------ccHHHHHhhCC
Confidence 2 378999999999999999998 77 999999998764211000 0000011011 11122334567
Q ss_pred CEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 647 PIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 647 PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
|+|+++|++|.++|++.+.++++.+ . .++++++++||.+.. +. .+.+..+++|+++...
T Consensus 129 p~lii~G~~D~~vp~~~~~~~~~~~-~----~~~~~~~~~gH~~~~-~~-p~~~~~~~~fl~~~~~ 187 (194)
T 2qs9_A 129 YIVQFGSTDDPFLPWKEQQEVADRL-E----TKLHKFTDCGHFQNT-EF-HELITVVKSLLKVPAL 187 (194)
T ss_dssp EEEEEEETTCSSSCHHHHHHHHHHH-T----CEEEEESSCTTSCSS-CC-HHHHHHHHHHHTCCCC
T ss_pred CEEEEEeCCCCcCCHHHHHHHHHhc-C----CeEEEeCCCCCccch-hC-HHHHHHHHHHHHhhhh
Confidence 9999999999999999999999888 3 389999999998653 33 3455667799987665
No 148
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.72 E-value=7.3e-17 Score=171.73 Aligned_cols=220 Identities=12% Similarity=0.123 Sum_probs=140.3
Q ss_pred CCCCEEEEEcCCCCCCcc-----------ccchhhh---HHHhhCCcEEEEecCCCCC--------CCchhHHHhh-c--
Q 004816 490 EKPPLLVKSHGGPTSEAR-----------GILNLSI---QYWTSRGWAFVDVNYGGST--------GYGREFRERL-L-- 544 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~~-----------~~~~~~~---~~la~~G~~v~~~d~rGs~--------g~g~~~~~~~-~-- 544 (729)
.+.|+||++||.+++... ..|...+ +.+...||.|+++|+||.| ++|..-.... .
T Consensus 40 ~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~ 119 (377)
T 3i1i_A 40 ERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGDE 119 (377)
T ss_dssp TCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSSB
T ss_pred CCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcccCCCCCCCCCCCCc
Confidence 345899999998665433 0134444 5677889999999999653 2222111000 0
Q ss_pred --cCCCcccHHHHHHHHHHHHhCCCCCCCcEE-EEEcChHHHHHHHHHh-CCCcceEEEE-eccccChhHHhh-------
Q 004816 545 --GRWGIVDVNDCCSCATFLVGSGKADEKRLC-ITGGSAGGYTTLAALA-FRDTFKAGAS-LYGVADLSMLRA------- 612 (729)
Q Consensus 545 --~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~-i~G~S~GG~~a~~~~~-~~~~~~a~v~-~~~~~d~~~~~~------- 612 (729)
..+....++|+.+.+..+++.. +.+++. |+||||||.+++.++. +|++++++|+ .++.........
T Consensus 120 ~~~~~~~~~~~~~~~d~~~~l~~l--~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 197 (377)
T 3i1i_A 120 YAMDFPVFTFLDVARMQCELIKDM--GIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQNPIITSVNVAQNAI 197 (377)
T ss_dssp CGGGSCCCCHHHHHHHHHHHHHHT--TCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSBCCHHHHHHTTHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHc--CCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCCcCCchhhHHHHHHH
Confidence 0112345677777777776653 346785 9999999999999988 9999999999 555433110000
Q ss_pred ----hcc--------------------------hhhhhhhhhhcC---------------------------------Ch
Q 004816 613 ----ETH--------------------------KFESRYIDNLVG---------------------------------SE 629 (729)
Q Consensus 613 ----~~~--------------------------~~~~~~~~~~~~---------------------------------~~ 629 (729)
... ......+...+. ..
T Consensus 198 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (377)
T 3i1i_A 198 EAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFEKEINKLTYRSIELVDA 277 (377)
T ss_dssp HHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCHHHHHHHHHHHHTTTTCCH
T ss_pred HHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccccccchhHHHHHHHHHHhhhhcccCH
Confidence 000 000000000000 00
Q ss_pred hhh-------hhcCc-------ccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECC-CCcccCCcc
Q 004816 630 KDY-------YEKSP-------INFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEG-EQHGFRKAE 694 (729)
Q Consensus 630 ~~~-------~~~sp-------~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~-~gH~~~~~~ 694 (729)
..+ ...++ ...+.++++|+|+++|++|.++|++.+.++++.++..+.+++++++++ +||.... +
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~~-e 356 (377)
T 3i1i_A 278 NSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKYAEVYEIESINGHMAGV-F 356 (377)
T ss_dssp HHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCCEEECCBCCTTGGGHHH-H
T ss_pred HHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCCceEEEcCCCCCCcchh-c
Confidence 000 00011 234568899999999999999999999999999988777899999998 9997432 3
Q ss_pred cHHHHHHHHHHHHHHHhC
Q 004816 695 NIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 695 ~~~~~~~~~~~fl~~~l~ 712 (729)
...++.+.+.+||.+++.
T Consensus 357 ~p~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 357 DIHLFEKKVYEFLNRKVS 374 (377)
T ss_dssp CGGGTHHHHHHHHHSCCS
T ss_pred CHHHHHHHHHHHHHhhhh
Confidence 446777888999988764
No 149
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.72 E-value=1.6e-16 Score=163.63 Aligned_cols=218 Identities=13% Similarity=0.092 Sum_probs=142.6
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++.+..+.+ .|+||++||.+.+ ...|...+..|.++||.|+++|+||.|..... .
T Consensus 17 ~g~~l~~~~~g~------------~~~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~-----~--- 74 (309)
T 3u1t_A 17 EGATIAYVDEGS------------GQPVLFLHGNPTS--SYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKP-----D--- 74 (309)
T ss_dssp TTEEEEEEEEEC------------SSEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTTSTTSCCC-----S---
T ss_pred CCeEEEEEEcCC------------CCEEEEECCCcch--hhhHHHHHHHHHhCCCEEEEEccCCCCCCCCC-----C---
Confidence 688888655422 3689999998544 34566777888889999999999986654331 1
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChh-------HHhh-------
Q 004816 548 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLS-------MLRA------- 612 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~-------~~~~------- 612 (729)
.....+++.+.+..+++.. +.+++.|+|||+||++++.++. +|++++++|+.++..... .+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (309)
T 3u1t_A 75 IEYRLQDHVAYMDGFIDAL--GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFR 152 (309)
T ss_dssp SCCCHHHHHHHHHHHHHHH--TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHc--CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHH
Confidence 1223444444444444431 3468999999999999999988 999999999998754322 0000
Q ss_pred h-------------cchhhhhhhhhh-cC---Ch---hhhh-----------------hc--------------Cccccc
Q 004816 613 E-------------THKFESRYIDNL-VG---SE---KDYY-----------------EK--------------SPINFV 641 (729)
Q Consensus 613 ~-------------~~~~~~~~~~~~-~~---~~---~~~~-----------------~~--------------sp~~~~ 641 (729)
. ...+...+.... .. .. ..+. .. +....+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (309)
T 3u1t_A 153 DLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWL 232 (309)
T ss_dssp HHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHH
T ss_pred HHhccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhc
Confidence 0 000000000000 00 00 0000 00 011224
Q ss_pred CCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhCCC
Q 004816 642 DKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVGHF 714 (729)
Q Consensus 642 ~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~ 714 (729)
.++++|+|+++|++|..+|++.+.++.+.+. ..++++++++||... .+...++.+.+.+||+++....
T Consensus 233 ~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~~~~~ 300 (309)
T 3u1t_A 233 MASPIPKLLFHAEPGALAPKPVVDYLSENVP----NLEVRFVGAGTHFLQ-EDHPHLIGQGIADWLRRNKPHA 300 (309)
T ss_dssp HHCCSCEEEEEEEECSSSCHHHHHHHHHHST----TEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHHHCCCC
T ss_pred ccCCCCEEEEecCCCCCCCHHHHHHHHhhCC----CCEEEEecCCcccch-hhCHHHHHHHHHHHHHhcchhh
Confidence 6689999999999999999998888888765 457778899999653 3566788899999999998744
No 150
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.71 E-value=3.5e-16 Score=166.79 Aligned_cols=232 Identities=13% Similarity=0.071 Sum_probs=144.9
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccc-------cchhhhH---HHhhCCcEEEEecCCC-CCCCc
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-------ILNLSIQ---YWTSRGWAFVDVNYGG-STGYG 536 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~-------~~~~~~~---~la~~G~~v~~~d~rG-s~g~g 536 (729)
+|.++.+..+.+.+ ..+.|+||++||.+.+.... .|...+. .|+++||.|+++|+|| .++..
T Consensus 42 ~g~~l~y~~~g~~~-------~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~ 114 (377)
T 2b61_A 42 SYINVAYQTYGTLN-------DEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTT 114 (377)
T ss_dssp CSEEEEEEEESCCC-------TTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSS
T ss_pred cceeEEEEeccccc-------ccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCC
Confidence 45667766654432 22358999999986554330 1454443 4768999999999998 34432
Q ss_pred hhHH-Hhh-----ccCCCcccHHHHHHHHHHHHhCCCCCCCcEE-EEEcChHHHHHHHHHh-CCCcceEEEEeccccChh
Q 004816 537 REFR-ERL-----LGRWGIVDVNDCCSCATFLVGSGKADEKRLC-ITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLS 608 (729)
Q Consensus 537 ~~~~-~~~-----~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~-i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~ 608 (729)
.... ... ...+.....+|+.+.+..+++. ++.+++. |+|||+||.+++.++. +|++++++|+.++.....
T Consensus 115 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 192 (377)
T 2b61_A 115 GPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEH--LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFS 192 (377)
T ss_dssp CTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHH--TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCC
T ss_pred CCcccCccccccccccCCcccHHHHHHHHHHHHHH--cCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCcccc
Confidence 2100 000 0111124567777777766665 3446887 9999999999999988 999999999999864321
Q ss_pred H----Hh-------hhcch--------------------hh-------hhhhhhhc------------------------
Q 004816 609 M----LR-------AETHK--------------------FE-------SRYIDNLV------------------------ 626 (729)
Q Consensus 609 ~----~~-------~~~~~--------------------~~-------~~~~~~~~------------------------ 626 (729)
. +. ..... .. ...+...+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (377)
T 2b61_A 193 AEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQ 272 (377)
T ss_dssp HHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHH
T ss_pred ccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhh
Confidence 0 00 00000 00 00000000
Q ss_pred -----C--Chh-------hhhhcC-------cccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEEC-
Q 004816 627 -----G--SEK-------DYYEKS-------PINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYE- 684 (729)
Q Consensus 627 -----~--~~~-------~~~~~s-------p~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~- 684 (729)
. ... .+...+ ....+.++++|+|+++|++|.++|++++.+..+.+.+....+++++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 352 (377)
T 2b61_A 273 GKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPS 352 (377)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred hhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCCceEEEeCC
Confidence 0 000 000111 134567889999999999999999976666667776666678999999
Q ss_pred CCCcccCCcccHHHHHHHHHHHHHH
Q 004816 685 GEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 685 ~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
++||.... +...++.+.+.+||.+
T Consensus 353 ~~gH~~~~-e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 353 DYGHDAFL-VDYDQFEKRIRDGLAG 376 (377)
T ss_dssp TTGGGHHH-HCHHHHHHHHHHHHHT
T ss_pred CCCchhhh-cCHHHHHHHHHHHHhc
Confidence 99997543 4456788888899865
No 151
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.71 E-value=1.7e-16 Score=162.47 Aligned_cols=200 Identities=13% Similarity=0.134 Sum_probs=130.3
Q ss_pred CCEEEEEcCCCCCCccccch-hhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 570 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~-~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 570 (729)
.|+||++||.+... ..|. .....++++||.|+++|+||.| .+.. ... ...+++.+.+..+++.- +.
T Consensus 43 ~~~vv~lHG~~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G~G---~s~~---~~~---~~~~~~~~~~~~~l~~l--~~ 109 (293)
T 3hss_A 43 GDPVVFIAGRGGAG--RTWHPHQVPAFLAAGYRCITFDNRGIG---ATEN---AEG---FTTQTMVADTAALIETL--DI 109 (293)
T ss_dssp SEEEEEECCTTCCG--GGGTTTTHHHHHHTTEEEEEECCTTSG---GGTT---CCS---CCHHHHHHHHHHHHHHH--TC
T ss_pred CCEEEEECCCCCch--hhcchhhhhhHhhcCCeEEEEccCCCC---CCCC---ccc---CCHHHHHHHHHHHHHhc--CC
Confidence 47899999985443 3444 4677888999999999999763 2211 111 22344433333333321 34
Q ss_pred CcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhh-----------------hhh----hhcCC
Q 004816 571 KRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESR-----------------YID----NLVGS 628 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~-----------------~~~----~~~~~ 628 (729)
+++.++|||+||.+++.++. +|++++++|+.+|................. ... .....
T Consensus 110 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (293)
T 3hss_A 110 APARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLND 189 (293)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHTC
T ss_pred CcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhcccccccc
Confidence 68999999999999999988 999999999999876432211100000000 000 00000
Q ss_pred h------------------hh-------hhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEE
Q 004816 629 E------------------KD-------YYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEY 683 (729)
Q Consensus 629 ~------------------~~-------~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 683 (729)
. .. ....+....+.++++|+|+++|++|..+|++.+.++.+.+. .++++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~ 265 (293)
T 3hss_A 190 DVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALP----NGRYLQI 265 (293)
T ss_dssp HHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHST----TEEEEEE
T ss_pred cccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCC----CceEEEe
Confidence 0 00 01122234467889999999999999999999888888774 5699999
Q ss_pred CCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 684 EGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 684 ~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
+++||... .+...+..+.+.+|+.+
T Consensus 266 ~~~gH~~~-~~~p~~~~~~i~~fl~~ 290 (293)
T 3hss_A 266 PDAGHLGF-FERPEAVNTAMLKFFAS 290 (293)
T ss_dssp TTCCTTHH-HHSHHHHHHHHHHHHHT
T ss_pred CCCcchHh-hhCHHHHHHHHHHHHHh
Confidence 99999753 34556777888888875
No 152
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.71 E-value=5.3e-16 Score=159.77 Aligned_cols=216 Identities=13% Similarity=0.087 Sum_probs=135.4
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchh-hhHHHhhCCcEEEEecCCCCCCCchhHHHhhccC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL-SIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGR 546 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~-~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~ 546 (729)
+|.++++..+.+. ..|.||++||.+.+. ..|.. .+..|+++||.|+++|+||.|.+...- ...
T Consensus 9 ~g~~l~y~~~G~~----------~~~~vvllHG~~~~~--~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~--~~~-- 72 (298)
T 1q0r_A 9 GDVELWSDDFGDP----------ADPALLLVMGGNLSA--LGWPDEFARRLADGGLHVIRYDHRDTGRSTTRD--FAA-- 72 (298)
T ss_dssp TTEEEEEEEESCT----------TSCEEEEECCTTCCG--GGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCC--TTT--
T ss_pred CCeEEEEEeccCC----------CCCeEEEEcCCCCCc--cchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCC--CCc--
Confidence 7888887766432 136799999985443 44554 458889999999999999876654300 001
Q ss_pred CCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEecccc-Ch--h--------------
Q 004816 547 WGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVA-DL--S-------------- 608 (729)
Q Consensus 547 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~-d~--~-------------- 608 (729)
.....+++.+-+..+++. ++.+++.++||||||.+++.++. +|++++++|+.++.. .. .
T Consensus 73 -~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (298)
T 1q0r_A 73 -HPYGFGELAADAVAVLDG--WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLD 149 (298)
T ss_dssp -SCCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSS
T ss_pred -CCcCHHHHHHHHHHHHHH--hCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhc
Confidence 112233333333333332 23468999999999999999998 999999999987654 21 0
Q ss_pred -------H----Hhh------hcchhhhhhhh---hh----c-CChh----------------------hhh---hcCcc
Q 004816 609 -------M----LRA------ETHKFESRYID---NL----V-GSEK----------------------DYY---EKSPI 638 (729)
Q Consensus 609 -------~----~~~------~~~~~~~~~~~---~~----~-~~~~----------------------~~~---~~sp~ 638 (729)
. +.. ........... .. . .+.+ .+. ..+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (298)
T 1q0r_A 150 GLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSR 229 (298)
T ss_dssp CSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGG
T ss_pred ccccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCcccc
Confidence 0 000 00000000000 00 0 0000 000 00112
Q ss_pred cc-cCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 639 NF-VDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 639 ~~-~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
.. +.++++|+|+++|++|.++|++.++++.+.+. ..+++++|++||. . ..++.+.+.+|+.+++
T Consensus 230 ~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~~~gHe--~---p~~~~~~i~~fl~~~~ 294 (298)
T 1q0r_A 230 AAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIP----TARLAEIPGMGHA--L---PSSVHGPLAEVILAHT 294 (298)
T ss_dssp GGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTST----TEEEEEETTCCSS--C---CGGGHHHHHHHHHHHH
T ss_pred cccccccCCCEEEEEeCCCccCCHHHHHHHHHhCC----CCEEEEcCCCCCC--C---cHHHHHHHHHHHHHHh
Confidence 23 67889999999999999999988887776654 5699999999992 2 2467788889998875
No 153
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.71 E-value=1.5e-16 Score=160.47 Aligned_cols=206 Identities=12% Similarity=0.096 Sum_probs=134.0
Q ss_pred CCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCC
Q 004816 490 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKAD 569 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 569 (729)
...|+||++||.+.+ ...|...+..|+++||.|+++|+||.|.+..... .....++....+..+++... +
T Consensus 10 ~~~~~vvllHG~~~~--~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~l~~l~-~ 79 (267)
T 3sty_A 10 FVKKHFVLVHAAFHG--AWCWYKIVALMRSSGHNVTALDLGASGINPKQAL-------QIPNFSDYLSPLMEFMASLP-A 79 (267)
T ss_dssp CCCCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHHHHHHHHHHTSC-T
T ss_pred CCCCeEEEECCCCCC--cchHHHHHHHHHhcCCeEEEeccccCCCCCCcCC-------ccCCHHHHHHHHHHHHHhcC-C
Confidence 456899999998543 4557788899999999999999998765443311 01234444444444444421 3
Q ss_pred CCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhH-----Hhhhc----chh--------------------hh
Q 004816 570 EKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSM-----LRAET----HKF--------------------ES 619 (729)
Q Consensus 570 ~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~-----~~~~~----~~~--------------------~~ 619 (729)
.+++.|+|||+||.+++.++. +|++++++|++++...... ..... ..+ ..
T Consensus 80 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
T 3sty_A 80 NEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGP 159 (267)
T ss_dssp TSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCH
T ss_pred CCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhH
Confidence 579999999999999999998 9999999999887542111 00000 000 00
Q ss_pred hhhhhh-cC--Ch------------------hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCE
Q 004816 620 RYIDNL-VG--SE------------------KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPV 678 (729)
Q Consensus 620 ~~~~~~-~~--~~------------------~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~ 678 (729)
...... .. .. ..+............++|+|+++|++|..+|++.+.++.+.+. .+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~ 235 (267)
T 3sty_A 160 KFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNP----PD 235 (267)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSC----CS
T ss_pred HHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhCC----Cc
Confidence 000000 00 00 0011112222222335899999999999999998888887764 35
Q ss_pred EEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 679 ALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 679 ~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
++++++++||.... +...++.+.+.+|++++
T Consensus 236 ~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 236 EVKEIEGSDHVTMM-SKPQQLFTTLLSIANKY 266 (267)
T ss_dssp EEEECTTCCSCHHH-HSHHHHHHHHHHHHHHC
T ss_pred eEEEeCCCCccccc-cChHHHHHHHHHHHHhc
Confidence 89999999997533 56678888889998764
No 154
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.71 E-value=1.3e-16 Score=174.44 Aligned_cols=221 Identities=17% Similarity=0.193 Sum_probs=143.3
Q ss_pred EEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHH
Q 004816 461 IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFR 540 (729)
Q Consensus 461 ~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~ 540 (729)
+.+... +|..+++.... ..|+||++||++.+. ..|...+..|+++||.|+++|+||.|.+....
T Consensus 6 ~~~~~~-dG~~l~y~~~G------------~gp~VV~lHG~~~~~--~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~- 69 (456)
T 3vdx_A 6 VGQENS-TSIDLYYEDHG------------TGVPVVLIHGFPLSG--HSWERQSAALLDAGYRVITYDRRGFGQSSQPT- 69 (456)
T ss_dssp EEEETT-EEEEEEEEEES------------SSEEEEEECCTTCCG--GGGTTHHHHHHHHTEEEEEECCTTSTTSCCCS-
T ss_pred eccccc-CCeEEEEEEeC------------CCCEEEEECCCCCcH--HHHHHHHHHHHHCCcEEEEECCCCCCCCCCCC-
Confidence 334454 78788754431 237899999986543 44667888899999999999999876543221
Q ss_pred HhhccCCCc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C-CCcceEEEEeccccChhH--------
Q 004816 541 ERLLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F-RDTFKAGASLYGVADLSM-------- 609 (729)
Q Consensus 541 ~~~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~-~~~~~a~v~~~~~~d~~~-------- 609 (729)
..+.. ...+|+.++++++ +.++++++|||+||++++.++. + |++++++|+.++......
T Consensus 70 ----~~~s~~~~a~dl~~~l~~l------~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~ 139 (456)
T 3vdx_A 70 ----TGYDYDTFAADLNTVLETL------DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDG 139 (456)
T ss_dssp ----SCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSC
T ss_pred ----CCCCHHHHHHHHHHHHHHh------CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccc
Confidence 11111 1255566666655 4468999999999998888877 4 999999999998653210
Q ss_pred -----Hhh--------hcchhhhhhhhhhcC---------Chhhh---------------------hhcCcccccCCCCC
Q 004816 610 -----LRA--------ETHKFESRYIDNLVG---------SEKDY---------------------YEKSPINFVDKFSC 646 (729)
Q Consensus 610 -----~~~--------~~~~~~~~~~~~~~~---------~~~~~---------------------~~~sp~~~~~~i~~ 646 (729)
... ....+...+...... ....+ ...+....+.++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~ 219 (456)
T 3vdx_A 140 AAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDV 219 (456)
T ss_dssp SBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCS
T ss_pred cchHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCC
Confidence 000 000000000000000 00000 01133345678899
Q ss_pred CEEEEEeCCCCCCChH-HHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 647 PIILFQGLEDKVVPPD-QARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 647 PvL~i~G~~D~~vp~~-~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
|+|+++|++|.++|++ ....+.+.+. ++++++++++||.+.. +....+.+.+.+||.+++.
T Consensus 220 PvLiI~G~~D~~vp~~~~~~~l~~~~~----~~~~~~i~gagH~~~~-e~p~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 220 PALILHGTGDRTLPIENTARVFHKALP----SAEYVEVEGAPHGLLW-THAEEVNTALLAFLAKALE 281 (456)
T ss_dssp CCEEEEETTCSSSCGGGTHHHHHHHCT----TSEEEEETTCCSCTTT-TTHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCcCHHHHHHHHHHHCC----CceEEEeCCCCCcchh-hCHHHHHHHHHHHHHHhhc
Confidence 9999999999999998 4444544432 5699999999998644 6778899999999998874
No 155
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.71 E-value=2.7e-16 Score=159.14 Aligned_cols=215 Identities=15% Similarity=0.133 Sum_probs=136.6
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++..+.+.+ ...|.||++||.+.+ ...|...+..|++ +|.|+++|+||.|.+.... .
T Consensus 10 ~g~~l~y~~~g~~~--------~~~~~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~-----~-- 71 (266)
T 2xua_A 10 NGTELHYRIDGERH--------GNAPWIVLSNSLGTD--LSMWAPQVAALSK-HFRVLRYDTRGHGHSEAPK-----G-- 71 (266)
T ss_dssp SSSEEEEEEESCSS--------SCCCEEEEECCTTCC--GGGGGGGHHHHHT-TSEEEEECCTTSTTSCCCS-----S--
T ss_pred CCEEEEEEEcCCcc--------CCCCeEEEecCccCC--HHHHHHHHHHHhc-CeEEEEecCCCCCCCCCCC-----C--
Confidence 78888877765421 124789999997443 3456677777765 5999999999866543211 1
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccCh---hHHhhh--------cc
Q 004816 548 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADL---SMLRAE--------TH 615 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~---~~~~~~--------~~ 615 (729)
....+++.+.+..+++. +..+++.++||||||.+++.++. +|++++++|+.++.... ..+... ..
T Consensus 72 -~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (266)
T 2xua_A 72 -PYTIEQLTGDVLGLMDT--LKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMH 148 (266)
T ss_dssp -CCCHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHH
T ss_pred -CCCHHHHHHHHHHHHHh--cCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChH
Confidence 12233333333333333 13468999999999999999998 99999999999875321 000000 00
Q ss_pred hhhhhhhhhhc---------------------CChhh-------hhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHH
Q 004816 616 KFESRYIDNLV---------------------GSEKD-------YYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKI 667 (729)
Q Consensus 616 ~~~~~~~~~~~---------------------~~~~~-------~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~ 667 (729)
........... ..... +...+....+.++++|+|+++|++|..+|++.++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~ 228 (266)
T 2xua_A 149 ALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGREL 228 (266)
T ss_dssp HHHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHH
T ss_pred HHHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHH
Confidence 00000000000 00111 112233345678899999999999999999988888
Q ss_pred HHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 668 YKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 668 ~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
.+.+.. .++++++ +||.... +...++.+.+.+|+.+
T Consensus 229 ~~~~~~----~~~~~~~-~gH~~~~-e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 229 AQAIAG----ARYVELD-ASHISNI-ERADAFTKTVVDFLTE 264 (266)
T ss_dssp HHHSTT----CEEEEES-CCSSHHH-HTHHHHHHHHHHHHTC
T ss_pred HHhCCC----CEEEEec-CCCCchh-cCHHHHHHHHHHHHHh
Confidence 877653 4899999 9997543 4456777888888753
No 156
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.71 E-value=8.2e-16 Score=156.86 Aligned_cols=199 Identities=16% Similarity=0.212 Sum_probs=124.2
Q ss_pred CEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCc
Q 004816 493 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 572 (729)
Q Consensus 493 P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 572 (729)
|.||++||.+.+. ..|...+..|+++||.|+++|+||.|.+.... .....+++..-+..+++. ++.++
T Consensus 28 ~~vvllHG~~~~~--~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--------~~~~~~~~a~dl~~ll~~--l~~~~ 95 (281)
T 3fob_A 28 KPVVLIHGWPLSG--RSWEYQVPALVEAGYRVITYDRRGFGKSSQPW--------EGYEYDTFTSDLHQLLEQ--LELQN 95 (281)
T ss_dssp EEEEEECCTTCCG--GGGTTTHHHHHHTTEEEEEECCTTSTTSCCCS--------SCCSHHHHHHHHHHHHHH--TTCCS
T ss_pred CeEEEECCCCCcH--HHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCc--------cccCHHHHHHHHHHHHHH--cCCCc
Confidence 4688899986543 45666778898999999999999876543221 112234444334434333 23468
Q ss_pred EEEEEcChHHHHHHHHHh--CCCcceEEEEeccccCh--------------h---HHhhh----cchhhhhhhhhhcC--
Q 004816 573 LCITGGSAGGYTTLAALA--FRDTFKAGASLYGVADL--------------S---MLRAE----THKFESRYIDNLVG-- 627 (729)
Q Consensus 573 i~i~G~S~GG~~a~~~~~--~~~~~~a~v~~~~~~d~--------------~---~~~~~----~~~~~~~~~~~~~~-- 627 (729)
+.|+||||||.+++.++. +|++++++|+.++.... . .+... ...+...+......
T Consensus 96 ~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (281)
T 3fob_A 96 VTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAG 175 (281)
T ss_dssp EEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBT
T ss_pred EEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHHHHhcccc
Confidence 999999999988776655 58999999988764210 0 00000 00000000000000
Q ss_pred ---------------------Ch-------hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHH-HHHHHHHHhCCCCE
Q 004816 628 ---------------------SE-------KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQA-RKIYKALKENGLPV 678 (729)
Q Consensus 628 ---------------------~~-------~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~-~~~~~~l~~~g~~~ 678 (729)
.. ..+...+....+.++++|+|+++|++|.++|++.+ ..+.+.+. +.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~p----~~ 251 (281)
T 3fob_A 176 DRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIP----NS 251 (281)
T ss_dssp TBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHST----TC
T ss_pred cccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhCC----Cc
Confidence 00 00111223345788999999999999999999876 44444443 45
Q ss_pred EEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 679 ALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 679 ~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
++++++++||... .+...++.+.+.+|++
T Consensus 252 ~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 252 KVALIKGGPHGLN-ATHAKEFNEALLLFLK 280 (281)
T ss_dssp EEEEETTCCTTHH-HHTHHHHHHHHHHHHC
T ss_pred eEEEeCCCCCchh-hhhHHHHHHHHHHHhh
Confidence 9999999999753 4566788888888874
No 157
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.70 E-value=2e-16 Score=161.82 Aligned_cols=217 Identities=18% Similarity=0.134 Sum_probs=134.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCC-CCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGG-PTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGR 546 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~ 546 (729)
+|..+++....+ ...|+||++||. ++......|...+..|++. |.|+++|+||.|.+.... .
T Consensus 15 ~g~~l~y~~~g~----------~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~-----~- 77 (285)
T 1c4x_A 15 GTLASHALVAGD----------PQSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVAPDLIGFGQSEYPE-----T- 77 (285)
T ss_dssp TTSCEEEEEESC----------TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTT-SEEEEECCTTSTTSCCCS-----S-
T ss_pred CCEEEEEEecCC----------CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhC-cEEEEecCCCCCCCCCCC-----C-
Confidence 677787655432 224779999996 3333344566667777665 999999999866543211 0
Q ss_pred CCcccHHHH----HHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccCh--------hHHhhh
Q 004816 547 WGIVDVNDC----CSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADL--------SMLRAE 613 (729)
Q Consensus 547 ~~~~~~~D~----~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~--------~~~~~~ 613 (729)
.....+++ ...+..+++. .+.+++.|+||||||.+++.++. +|++++++|+.++.... ......
T Consensus 78 -~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 154 (285)
T 1c4x_A 78 -YPGHIMSWVGMRVEQILGLMNH--FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAF 154 (285)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHH--HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTG
T ss_pred -cccchhhhhhhHHHHHHHHHHH--hCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHH
Confidence 01223333 3333333332 12468999999999999999988 99999999999875421 000000
Q ss_pred ---cc--h--------------h--hhhhhhhhc---CChhhhh---h------------cCcccccCCCCCCEEEEEeC
Q 004816 614 ---TH--K--------------F--ESRYIDNLV---GSEKDYY---E------------KSPINFVDKFSCPIILFQGL 654 (729)
Q Consensus 614 ---~~--~--------------~--~~~~~~~~~---~~~~~~~---~------------~sp~~~~~~i~~PvL~i~G~ 654 (729)
.. . . ...+..... .++..+. . ......+.++++|+|+++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 234 (285)
T 1c4x_A 155 YADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGR 234 (285)
T ss_dssp GGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEET
T ss_pred hccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeC
Confidence 00 0 0 000000000 0010000 0 01223467889999999999
Q ss_pred CCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 655 EDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 655 ~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
+|.++|++.++++++.+. ++++++++++||.... +...++.+.+.+||.+
T Consensus 235 ~D~~~p~~~~~~~~~~~~----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 235 QDRIVPLDTSLYLTKHLK----HAELVVLDRCGHWAQL-ERWDAMGPMLMEHFRA 284 (285)
T ss_dssp TCSSSCTHHHHHHHHHCS----SEEEEEESSCCSCHHH-HSHHHHHHHHHHHHHC
T ss_pred CCeeeCHHHHHHHHHhCC----CceEEEeCCCCcchhh-cCHHHHHHHHHHHHhc
Confidence 999999998888877664 5699999999997533 4566788888888864
No 158
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.70 E-value=8.2e-17 Score=173.10 Aligned_cols=228 Identities=18% Similarity=0.170 Sum_probs=141.9
Q ss_pred CCcEEEEeecc-CCC--eEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcc---------ccchhhhHHHhhCCcE
Q 004816 456 SLPELIEFPTE-VPG--QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR---------GILNLSIQYWTSRGWA 523 (729)
Q Consensus 456 ~~~~~~~~~~~-~dG--~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~---------~~~~~~~~~la~~G~~ 523 (729)
....++.+.+. .+| ..+.++++.|.+.. +.++.|+||++||+++.... ..+...++.|+++||.
T Consensus 44 v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~----~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 119 (397)
T 3h2g_A 44 VRVAEFTYATIGVEGEPATASGVLLIPGGER----CSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYV 119 (397)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEECTT----CCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCE
T ss_pred eEEEEEEEEecCCCCCeEEEEEEEEeCCCCC----CCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCE
Confidence 34566777665 124 35899999997632 24568999999998654432 2255678889999999
Q ss_pred EEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhC-CCCCCCcEEEEEcChHHHHHHHHHh--CC-----Ccc
Q 004816 524 FVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGS-GKADEKRLCITGGSAGGYTTLAALA--FR-----DTF 595 (729)
Q Consensus 524 v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~--~~-----~~~ 595 (729)
|+++|+||.|+++..............++.|...++..+.++ +..++++++++|||+||++++.++. .+ -.+
T Consensus 120 V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~ 199 (397)
T 3h2g_A 120 VVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHL 199 (397)
T ss_dssp EEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEE
T ss_pred EEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcce
Confidence 999999998765321110000000012355666666666554 4435689999999999999988863 22 267
Q ss_pred eEEEEeccccChhHHhhhc----------------------------chh--------hhhh---hhhhcC---C-----
Q 004816 596 KAGASLYGVADLSMLRAET----------------------------HKF--------ESRY---IDNLVG---S----- 628 (729)
Q Consensus 596 ~a~v~~~~~~d~~~~~~~~----------------------------~~~--------~~~~---~~~~~~---~----- 628 (729)
.+++..++..++....... ... ...+ +...+. .
T Consensus 200 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (397)
T 3h2g_A 200 VASAPISGPYALEQTFLDSWSGSNAVGENTFGILLGSYAIVAMQHTYKNIYLEPGQVFQDPWAAKVEPLFPGKQSLTDMF 279 (397)
T ss_dssp EEEEEESCCSSHHHHHHHHTTSBCSSSBCTTHHHHHHHHHHHHHHHHCCSCSSGGGTBCTTHHHHSGGGTTBSSCHHHHH
T ss_pred EEEecccccccHHHHHHhhccccccccccchhhhHHHHHHHHHHHhCchhhcCHHHHhchhHHHHHHHhcCCCccchhhh
Confidence 8888888888875332110 000 0000 000000 0
Q ss_pred ----------------hh---------------hhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCC
Q 004816 629 ----------------EK---------------DYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLP 677 (729)
Q Consensus 629 ----------------~~---------------~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~ 677 (729)
.. .....+. ....+++|+|++||++|.+||++++..+++.+++.|.+
T Consensus 280 ~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~--~~~~~~~P~li~~g~~D~~vp~~~~~~~~~~~~~~g~~ 357 (397)
T 3h2g_A 280 LNDTLPSIDKVKSYFQPGFYSDFPSNPANPFRQDLARNNL--LEWAPQTPTLLCGSSNDATVPLKNAQTAIASFQQRGSN 357 (397)
T ss_dssp HTTSSCCGGGHHHHBCHHHHHHHHHCTTCHHHHHHHHTCC--CSSCCCSCEEEEECTTBSSSCTHHHHHHHHHHHHTTCC
T ss_pred ccccCCCccchHhhcCHHHHHhhhhCCccHHHHHHHhcch--hccCCCCCEEEEEECCCCccCHHHHHHHHHHHHhcCCC
Confidence 00 0000010 01234789999999999999999999999999999987
Q ss_pred -EEEEEECCCCccc
Q 004816 678 -VALVEYEGEQHGF 690 (729)
Q Consensus 678 -~~~~~~~~~gH~~ 690 (729)
+++.... .||..
T Consensus 358 ~v~l~~~~-~g~~~ 370 (397)
T 3h2g_A 358 QVALVDTG-TGNAS 370 (397)
T ss_dssp CEEEEECS-CSCGG
T ss_pred ceEEEEcC-CCCCC
Confidence 7777654 35544
No 159
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.70 E-value=1.6e-16 Score=152.17 Aligned_cols=181 Identities=12% Similarity=0.033 Sum_probs=120.0
Q ss_pred CCEEEEEcCCCCCCccccchhhh-HHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSI-QYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 570 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~-~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 570 (729)
.|+||++||.+.+... .|.... ..|+++||.|+++|+|.+.. .+.+++.+.+..+++.. .
T Consensus 4 ~p~vv~~HG~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~~~---------------~~~~~~~~~~~~~~~~~---~ 64 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTN-HWFPWLKKRLLADGVQADILNMPNPLQ---------------PRLEDWLDTLSLYQHTL---H 64 (192)
T ss_dssp CCEEEEECCTTCCTTS-TTHHHHHHHHHHTTCEEEEECCSCTTS---------------CCHHHHHHHHHTTGGGC---C
T ss_pred CCEEEEEcCCCCCcch-hHHHHHHHHHHhCCcEEEEecCCCCCC---------------CCHHHHHHHHHHHHHhc---c
Confidence 5889999998554321 344444 46888999999999993221 12455555554444442 4
Q ss_pred CcEEEEEcChHHHHHHHHHh-CCC--cceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCC
Q 004816 571 KRLCITGGSAGGYTTLAALA-FRD--TFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCP 647 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~-~~~--~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P 647 (729)
+++.++|||+||.+++.++. +|+ +++++|+.+|.......... . ..+...+ .....+.++++|
T Consensus 65 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~~---~-----~~~~~~~------~~~~~~~~~~~P 130 (192)
T 1uxo_A 65 ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQM---L-----DEFTQGS------FDHQKIIESAKH 130 (192)
T ss_dssp TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGG---G-----GGGTCSC------CCHHHHHHHEEE
T ss_pred CCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccchh---h-----hhhhhcC------CCHHHHHhhcCC
Confidence 78999999999999999998 888 99999999987653211100 0 0010000 011234456689
Q ss_pred EEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 648 IILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 648 vL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
+|+++|++|..+|++.+.++++.+ +.++++++++||.+..... ..+..+.+|+.+++.
T Consensus 131 ~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~--~~~~~~~~~l~~~l~ 188 (192)
T 1uxo_A 131 RAVIASKDDQIVPFSFSKDLAQQI-----DAALYEVQHGGHFLEDEGF--TSLPIVYDVLTSYFS 188 (192)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHT-----TCEEEEETTCTTSCGGGTC--SCCHHHHHHHHHHHH
T ss_pred EEEEecCCCCcCCHHHHHHHHHhc-----CceEEEeCCCcCccccccc--ccHHHHHHHHHHHHH
Confidence 999999999999999998888887 3389999999998643211 111234555555554
No 160
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.70 E-value=1.7e-15 Score=159.48 Aligned_cols=231 Identities=11% Similarity=0.163 Sum_probs=156.7
Q ss_pred ECCEEEEEECC--------CCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEE
Q 004816 153 FGDTVIFSNYK--------DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (729)
Q Consensus 153 ~~~~i~~~~~~--------~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~ 224 (729)
+++.++|.... .++||++++++ ++.++|.. ...++|||||++|+|+....... ..+||
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~--------~~~~~~SpDg~~la~~~~~~~~~----~~~l~ 88 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKN--NARRFIEN--------ATMPRISPDGKKIAFMRANEEKK----VSEIW 88 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTT--CCEEEEES--------CEEEEECTTSSEEEEEEEETTTT----EEEEE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCC--CceEEccc--------CCCeEECCCCCEEEEEEeccCCC----cceEE
Confidence 78888887421 34899999998 77777722 36789999999999998654211 46799
Q ss_pred EEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCC---------CC----------CCCcEEEEEEecCCCCe-e
Q 004816 225 AIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPN---------MP----------WDKAELWVGYISENGDV-Y 284 (729)
Q Consensus 225 ~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~---------~~----------~~~~~l~~~d~~~~g~~-~ 284 (729)
++++++++.++++.... ...++|||||++|+|.+.+... .+ ....+||++|++ +|+. .
T Consensus 89 ~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~-~~~~~~ 166 (347)
T 2gop_A 89 VADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE-SEEVIE 166 (347)
T ss_dssp EEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT-TTEEEE
T ss_pred EEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC-CCeEEe
Confidence 99999999998887655 7889999999999999854210 00 013679999998 6764 3
Q ss_pred eeEEecCCCCCccccccCceeCCCCcEEEEEecCC-----C-ceEEEEEEcCCCeEEEeeccCccccCCcccccCcceee
Q 004816 285 KRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKN-----G-FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEI 358 (729)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~-----g-~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~ 358 (729)
.+.. . . +..+.|+||| ++|...... . ...||.+| +++.+.|+.. .... .++
T Consensus 167 ~l~~-~--~------~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~~--~~s-------- 223 (347)
T 2gop_A 167 EFEK-P--R------FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VSFY--AVD-------- 223 (347)
T ss_dssp EEEE-E--T------TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ESEE--EEE--------
T ss_pred eecC-C--C------cccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC-ccee--eEC--------
Confidence 3222 2 1 2468999999 888876522 1 56899999 7788877743 2211 112
Q ss_pred eeecCCCCEEEEEEEEC-----CeEEEEEEECCCCceEeeccC-CcceEE-e-eeeCCEEEEEEeCCCCCceEEEEEcCC
Q 004816 359 IQSHGEKNLIACSYRQN-----GRSYLGILDDFGHSLSLLDIP-FTDIDN-I-TLGNDCLFVEGASGVEPSSVAKVTLDD 430 (729)
Q Consensus 359 l~~~~~~~~l~~~s~~~-----g~~~ly~~d~~~g~~~~lt~~-~~~v~~-~-~~~~~~~~~~~~~~~~~~~ly~~d~~~ 430 (729)
+ +++.|++.+... ...+||.++ +++.+.++.. ...+.. + .. ++ +++ .++.+....|| ++ +
T Consensus 224 -p---dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~-~~~~~~~~~l~-~~--~ 291 (347)
T 2gop_A 224 -S---DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYF-TLFEEGSVNLY-IW--D 291 (347)
T ss_dssp -E---CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEE-EEEETTEEEEE-EE--S
T ss_pred -C---CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEE-EEecCCcEEEE-Ec--C
Confidence 2 788888877554 246899998 6777777765 345554 4 33 44 444 44444455688 87 3
Q ss_pred Ccce
Q 004816 431 HKLK 434 (729)
Q Consensus 431 ~~~~ 434 (729)
++.+
T Consensus 292 g~~~ 295 (347)
T 2gop_A 292 GEIK 295 (347)
T ss_dssp SSEE
T ss_pred CceE
Confidence 5543
No 161
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.70 E-value=5.3e-17 Score=164.63 Aligned_cols=227 Identities=12% Similarity=0.074 Sum_probs=139.2
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchh
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE 538 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~ 538 (729)
+...+.. ++.++.+....+ +.|+||++||.+.. ...|...+..+.++||.|+++|+||.|.....
T Consensus 4 ~~~~~~~--~~~~~~~~~~~~-----------~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 68 (279)
T 4g9e_A 4 NYHELET--SHGRIAVRESEG-----------EGAPLLMIHGNSSS--GAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDA 68 (279)
T ss_dssp EEEEEEE--TTEEEEEEECCC-----------CEEEEEEECCTTCC--GGGGHHHHHSHHHHHEEEEEECCTTSTTSCCC
T ss_pred EEEEEEc--CCceEEEEecCC-----------CCCeEEEECCCCCc--hhHHHHHHhHHHhcCCeEEeecCCCCCCCCCC
Confidence 4555666 455666544322 24789999998543 34567777777788999999999987765432
Q ss_pred HHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChh-HHhhhcc-
Q 004816 539 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLS-MLRAETH- 615 (729)
Q Consensus 539 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~-~~~~~~~- 615 (729)
..... ....+++...+..+++. .+.+++.++|||+||.+++.++. +|+ +.++|+.++..... .......
T Consensus 69 ~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~ 140 (279)
T 4g9e_A 69 IDPDR-----SYSMEGYADAMTEVMQQ--LGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKS 140 (279)
T ss_dssp SCHHH-----HSSHHHHHHHHHHHHHH--HTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCC
T ss_pred CCccc-----CCCHHHHHHHHHHHHHH--hCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhcc
Confidence 10111 11234444444444443 13468999999999999999998 888 66666665543221 1100000
Q ss_pred ----------h----hhhhhhhhhcC---Ch------------------hhhh---hcCcccccCCCCCCEEEEEeCCCC
Q 004816 616 ----------K----FESRYIDNLVG---SE------------------KDYY---EKSPINFVDKFSCPIILFQGLEDK 657 (729)
Q Consensus 616 ----------~----~~~~~~~~~~~---~~------------------~~~~---~~sp~~~~~~i~~PvL~i~G~~D~ 657 (729)
. ....+...... .. ..+. ..+....+.++++|+|+++|++|.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~ 220 (279)
T 4g9e_A 141 GPDMALAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEP 220 (279)
T ss_dssp STTGGGGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCS
T ss_pred chhhhhcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCc
Confidence 0 00000000000 00 0000 112222356789999999999999
Q ss_pred CCChHHHHHHH-HHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhCC
Q 004816 658 VVPPDQARKIY-KALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVGH 713 (729)
Q Consensus 658 ~vp~~~~~~~~-~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~ 713 (729)
.+|++.+.+++ +.+. ++++++++++||... .+...++.+.+.+||++.-..
T Consensus 221 ~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~~~~ 272 (279)
T 4g9e_A 221 FVELDFVSKVKFGNLW----EGKTHVIDNAGHAPF-REAPAEFDAYLARFIRDCTQL 272 (279)
T ss_dssp SBCHHHHTTCCCSSBG----GGSCEEETTCCSCHH-HHSHHHHHHHHHHHHHHHHSS
T ss_pred ccchHHHHHHhhccCC----CCeEEEECCCCcchH-HhCHHHHHHHHHHHHHHhhhh
Confidence 99998877765 3332 457899999999743 356678889999999998763
No 162
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.70 E-value=8.6e-17 Score=163.86 Aligned_cols=198 Identities=19% Similarity=0.212 Sum_probs=126.9
Q ss_pred CEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCc-ccHHHHHHHHHHHHhCCCCCCC
Q 004816 493 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI-VDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 493 P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+.... ..+.. ...+|+.++++.+ +.+
T Consensus 24 ~pvvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~dl~~~l~~l------~~~ 90 (279)
T 1hkh_A 24 QPVVLIHGYPLD--GHSWERQTRELLAQGYRVITYDRRGFGGSSKVN-----TGYDYDTFAADLHTVLETL------DLR 90 (279)
T ss_dssp EEEEEECCTTCC--GGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCS-----SCCSHHHHHHHHHHHHHHH------TCC
T ss_pred CcEEEEcCCCch--hhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHhc------CCC
Confidence 349999998543 355777888999999999999999876543221 11111 1245566666654 346
Q ss_pred cEEEEEcChHHHHHHHHHh-CCC-cceEEEEeccccChh------------HHh----hh----cch----hhhhhhhhh
Q 004816 572 RLCITGGSAGGYTTLAALA-FRD-TFKAGASLYGVADLS------------MLR----AE----THK----FESRYIDNL 625 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~-~~~-~~~a~v~~~~~~d~~------------~~~----~~----~~~----~~~~~~~~~ 625 (729)
++.++||||||.+++.++. +|+ +++++|+.++..... ... .. ... +...+....
T Consensus 91 ~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (279)
T 1hkh_A 91 DVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLD 170 (279)
T ss_dssp SEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHH
T ss_pred ceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhhhhcc
Confidence 8999999999999999888 898 999999998742210 000 00 000 000000000
Q ss_pred --cC---Chhh---h----------------h--hcCcccccCCC---CCCEEEEEeCCCCCCChHHH-HHHHHHHHhCC
Q 004816 626 --VG---SEKD---Y----------------Y--EKSPINFVDKF---SCPIILFQGLEDKVVPPDQA-RKIYKALKENG 675 (729)
Q Consensus 626 --~~---~~~~---~----------------~--~~sp~~~~~~i---~~PvL~i~G~~D~~vp~~~~-~~~~~~l~~~g 675 (729)
.. ..+. + . ..+....+.++ ++|+|+++|++|..+|++.+ ..+.+.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~--- 247 (279)
T 1hkh_A 171 ENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVP--- 247 (279)
T ss_dssp HHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCT---
T ss_pred cCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhCC---
Confidence 00 0000 0 0 11112234567 89999999999999999877 77766654
Q ss_pred CCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 676 LPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 676 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
.+++++++++||... .++..++.+.+.+|+.
T Consensus 248 -~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 248 -EADYVEVEGAPHGLL-WTHADEVNAALKTFLA 278 (279)
T ss_dssp -TSEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred -CeeEEEeCCCCccch-hcCHHHHHHHHHHHhh
Confidence 458999999999763 3456778888888885
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.70 E-value=2.6e-16 Score=178.45 Aligned_cols=245 Identities=13% Similarity=0.042 Sum_probs=167.7
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCC--CCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcE
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPA--KAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~--~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 167 (729)
.+..|.|||+ ++.|............||..+. + |....++... .. ...+|+++++.++|.....+.+
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~--g~~~~l~~~~-~~-------~~~~~s~dg~~~~~~s~~~~~~ 134 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRP--GEEQRLEAVK-PM-------RILSGVDTGEAVVFTGATEDRV 134 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTST--TCCEECTTSC-SB-------EEEEEEECSSCEEEEEECSSCE
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCC--CccccccCCC-Cc-------eeeeeCCCCCeEEEEecCCCCc
Confidence 4568899987 6766665422345567888876 5 3444555432 11 1346888888888887777777
Q ss_pred EEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeeeee
Q 004816 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAFPR 247 (729)
Q Consensus 168 ~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~~ 247 (729)
+++|+++ ++.++++... . .+++|||||++|++...+... ...||++|+++|+.++|+...+....|+
T Consensus 135 ~l~d~~~--g~~~~l~~~~----~--~~~~~spDG~~la~~~~~~~~-----~~~i~~~d~~~g~~~~l~~~~~~~~~~~ 201 (582)
T 3o4h_A 135 ALYALDG--GGLRELARLP----G--FGFVSDIRGDLIAGLGFFGGG-----RVSLFTSNLSSGGLRVFDSGEGSFSSAS 201 (582)
T ss_dssp EEEEEET--TEEEEEEEES----S--CEEEEEEETTEEEEEEEEETT-----EEEEEEEETTTCCCEEECCSSCEEEEEE
T ss_pred eEEEccC--CcEEEeecCC----C--ceEEECCCCCEEEEEEEcCCC-----CeEEEEEcCCCCCceEeecCCCccccce
Confidence 7889988 8888888652 2 678999999999988776432 2569999999999999988777788999
Q ss_pred eCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCce--------eCCCCcEEEEEecCC
Q 004816 248 MDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK--------WSSKGELFFVTDRKN 319 (729)
Q Consensus 248 ~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~--------wspDG~l~~~~~~~~ 319 (729)
|||||++|+ .+ +..+ ..+||++|++ +++. . ++.+.+ ..+..+. |||||++++.... .
T Consensus 202 ~SpDG~~l~-~~-~~~~----~~~i~~~d~~-~~~~--~-~~~~~~----~~~~~~~~~~~~~~~~spdg~~~~~~~~-~ 266 (582)
T 3o4h_A 202 ISPGMKVTA-GL-ETAR----EARLVTVDPR-DGSV--E-DLELPS----KDFSSYRPTAITWLGYLPDGRLAVVARR-E 266 (582)
T ss_dssp ECTTSCEEE-EE-ECSS----CEEEEEECTT-TCCE--E-ECCCSC----SHHHHHCCSEEEEEEECTTSCEEEEEEE-T
T ss_pred ECCCCCEEE-Ec-cCCC----eeEEEEEcCC-CCcE--E-EccCCC----cChhhhhhccccceeEcCCCcEEEEEEc-C
Confidence 999999998 33 2221 3579999998 6765 2 555544 4445567 9999997777776 6
Q ss_pred CceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEee
Q 004816 320 GFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 393 (729)
Q Consensus 320 g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~l 393 (729)
+..+||.+ |+..... ...+ ..+.|. +++.++..+.......||+++.++ +.++|
T Consensus 267 g~~~l~~~----g~~~~~~--~~~v---------~~~~~s----dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 267 GRSAVFID----GERVEAP--QGNH---------GRVVLW----RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp TEEEEEET----TEEECCC--SSEE---------EEEEEE----TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred CcEEEEEE----CCeeccC--CCce---------EEEEec----CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 77777765 5443311 1111 133443 455554445555567899999876 66666
No 164
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.69 E-value=1.1e-16 Score=161.50 Aligned_cols=203 Identities=12% Similarity=0.048 Sum_probs=131.8
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhh-CCcEEEEecCCCCCCCchhHHHhhccCCC-cccHHHHHHHHHHHHhCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGSTGYGREFRERLLGRWG-IVDVNDCCSCATFLVGSGKAD 569 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~-~G~~v~~~d~rGs~g~g~~~~~~~~~~~~-~~~~~D~~~~~~~l~~~~~~d 569 (729)
.|.||++||.+.. ...|...+..|++ +||.|+++|+||.|....... +. ....+|+.++++.+. +
T Consensus 21 ~~~vv~lhG~~~~--~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~~l~~~~-----~ 87 (272)
T 3fsg_A 21 GTPIIFLHGLSLD--KQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP------STSDNVLETLIEAIEEII-----G 87 (272)
T ss_dssp SSEEEEECCTTCC--HHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS------CSHHHHHHHHHHHHHHHH-----T
T ss_pred CCeEEEEeCCCCc--HHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCC------CCHHHHHHHHHHHHHHHh-----C
Confidence 3679999998543 3446666666777 799999999998665433211 11 012455555555532 3
Q ss_pred CCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcc-------------------------------hh
Q 004816 570 EKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETH-------------------------------KF 617 (729)
Q Consensus 570 ~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~-------------------------------~~ 617 (729)
.+++.++|||+||.+++.++. +|++++++|+.+|............ ..
T Consensus 88 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (272)
T 3fsg_A 88 ARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQA 167 (272)
T ss_dssp TCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHHCSEESHHH
T ss_pred CCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHHhccCCCch
Confidence 478999999999999999998 9999999999998752211100000 00
Q ss_pred hhhhhhhhc-----CChhhh---h-----hcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEEC
Q 004816 618 ESRYIDNLV-----GSEKDY---Y-----EKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYE 684 (729)
Q Consensus 618 ~~~~~~~~~-----~~~~~~---~-----~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ 684 (729)
...+..... ...... . ...+...+.++++|+|+++|++|..+|++.+.++.+.+. .+++++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~ 243 (272)
T 3fsg_A 168 WHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNE----NGEIVLLN 243 (272)
T ss_dssp HHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTCT----TEEEEEES
T ss_pred hHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhcC----CCeEEEec
Confidence 000000000 000000 0 001111347889999999999999999988887776653 57999999
Q ss_pred CCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 685 GEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 685 ~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
++||.+.. +...+..+.+.+|+.+...
T Consensus 244 ~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 244 RTGHNLMI-DQREAVGFHFDLFLDELNS 270 (272)
T ss_dssp SCCSSHHH-HTHHHHHHHHHHHHHHHHC
T ss_pred CCCCCchh-cCHHHHHHHHHHHHHHhhc
Confidence 99997643 4567888899999988654
No 165
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.69 E-value=1.8e-15 Score=157.13 Aligned_cols=224 Identities=16% Similarity=0.103 Sum_probs=134.1
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchh
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE 538 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~ 538 (729)
+...+... +|.++++..+.+. ..|.||++||++++.... .....+...||.|+++|+||.|.+...
T Consensus 15 ~~~~~~~~-~g~~l~~~~~g~~----------~g~~vvllHG~~~~~~~~---~~~~~~~~~~~~vi~~D~~G~G~S~~~ 80 (317)
T 1wm1_A 15 DSGWLDTG-DGHRIYWELSGNP----------NGKPAVFIHGGPGGGISP---HHRQLFDPERYKVLLFDQRGCGRSRPH 80 (317)
T ss_dssp EEEEEECS-SSCEEEEEEEECT----------TSEEEEEECCTTTCCCCG---GGGGGSCTTTEEEEEECCTTSTTCBST
T ss_pred eeeEEEcC-CCcEEEEEEcCCC----------CCCcEEEECCCCCcccch---hhhhhccccCCeEEEECCCCCCCCCCC
Confidence 44456665 7888876555331 125689999986543221 223445567999999999986654321
Q ss_pred HHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhH--------
Q 004816 539 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSM-------- 609 (729)
Q Consensus 539 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~-------- 609 (729)
. .......+++.+.+..+++. ++.+++.|+||||||.+++.++. +|++++++|+.++......
T Consensus 81 ---~---~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 152 (317)
T 1wm1_A 81 ---A---SLDNNTTWHLVADIERLREM--AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQD 152 (317)
T ss_dssp ---T---CCTTCSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTS
T ss_pred ---c---ccccccHHHHHHHHHHHHHH--cCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhc
Confidence 0 01112344555545555444 23468999999999999999988 9999999999876432100
Q ss_pred ------------Hhhhcc-----hhhhhhhhhhcC-------------------------Chh-------h---------
Q 004816 610 ------------LRAETH-----KFESRYIDNLVG-------------------------SEK-------D--------- 631 (729)
Q Consensus 610 ------------~~~~~~-----~~~~~~~~~~~~-------------------------~~~-------~--------- 631 (729)
+..... .....+...... ... .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (317)
T 1wm1_A 153 GASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIE 232 (317)
T ss_dssp SGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHH
T ss_pred cchhhcHHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhh
Confidence 000000 000000000000 000 0
Q ss_pred --h-h-----h-cC-cccccCCCC-CCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHH
Q 004816 632 --Y-Y-----E-KS-PINFVDKFS-CPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTL 700 (729)
Q Consensus 632 --~-~-----~-~s-p~~~~~~i~-~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~ 700 (729)
+ . . .. ....+.+++ +|+|+++|++|.++|++.+..+.+.+. ++++++++++||....++...+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p----~~~~~~i~~~gH~~~~~~~~~~~~ 308 (317)
T 1wm1_A 233 NHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWP----EAELHIVEGAGHSYDEPGILHQLM 308 (317)
T ss_dssp HHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCT----TSEEEEETTCCSSTTSHHHHHHHH
T ss_pred hhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCC----CceEEEECCCCCCCCCcchHHHHH
Confidence 0 0 0 00 123345675 999999999999999999888888775 348999999999765444455566
Q ss_pred HHHHHHHH
Q 004816 701 EQQMVFFA 708 (729)
Q Consensus 701 ~~~~~fl~ 708 (729)
+.+.+|+.
T Consensus 309 ~~i~~f~~ 316 (317)
T 1wm1_A 309 IATDRFAG 316 (317)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhc
Confidence 66666553
No 166
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.69 E-value=1.6e-15 Score=155.25 Aligned_cols=202 Identities=12% Similarity=0.075 Sum_probs=129.5
Q ss_pred CEEEEEcCC-CCCCccccchhhh-HHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCC
Q 004816 493 PLLVKSHGG-PTSEARGILNLSI-QYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 570 (729)
Q Consensus 493 P~vv~~hGg-~~~~~~~~~~~~~-~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 570 (729)
|.||++||. +++.....|...+ ..|+++ |.|+++|+||.|.+...- . .....+++...+..+++.. +.
T Consensus 34 ~~vvllHG~~~~~~~~~~w~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~-----~--~~~~~~~~a~dl~~~l~~l--~~ 103 (286)
T 2puj_A 34 ETVIMLHGGGPGAGGWSNYYRNVGPFVDAG-YRVILKDSPGFNKSDAVV-----M--DEQRGLVNARAVKGLMDAL--DI 103 (286)
T ss_dssp SEEEEECCCSTTCCHHHHHTTTHHHHHHTT-CEEEEECCTTSTTSCCCC-----C--SSCHHHHHHHHHHHHHHHT--TC
T ss_pred CcEEEECCCCCCCCcHHHHHHHHHHHHhcc-CEEEEECCCCCCCCCCCC-----C--cCcCHHHHHHHHHHHHHHh--CC
Confidence 679999997 3333344566667 777765 999999999866543210 0 0123444444444444432 34
Q ss_pred CcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccCh------------hHHhhh---cc-hhhhhhhhhhc-------
Q 004816 571 KRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADL------------SMLRAE---TH-KFESRYIDNLV------- 626 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~------------~~~~~~---~~-~~~~~~~~~~~------- 626 (729)
+++.|+||||||.+|+.++. +|++++++|+.++.... ...... .. .....+.....
T Consensus 104 ~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (286)
T 2puj_A 104 DRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLIT 183 (286)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGCC
T ss_pred CceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccCC
Confidence 78999999999999999998 99999999999875320 000000 00 00000000000
Q ss_pred ------------CChhh---hh---------hcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEE
Q 004816 627 ------------GSEKD---YY---------EKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVE 682 (729)
Q Consensus 627 ------------~~~~~---~~---------~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 682 (729)
.++.. +. ..+....+.++++|+|+++|++|.++|++.++++.+.+. .+++++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~----~~~~~~ 259 (286)
T 2puj_A 184 EELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNID----DARLHV 259 (286)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSS----SEEEEE
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCC----CCeEEE
Confidence 00100 00 112234567889999999999999999998888877764 569999
Q ss_pred ECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 683 YEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 683 ~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
++++||... .+...++.+.+.+||.+
T Consensus 260 i~~~gH~~~-~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 260 FSKCGAWAQ-WEHADEFNRLVIDFLRH 285 (286)
T ss_dssp ESSCCSCHH-HHTHHHHHHHHHHHHHH
T ss_pred eCCCCCCcc-ccCHHHHHHHHHHHHhc
Confidence 999999753 34567788888899864
No 167
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=3.9e-15 Score=172.82 Aligned_cols=265 Identities=9% Similarity=-0.005 Sum_probs=174.6
Q ss_pred EEEECCEEEEEECCC----CcEEEEeCCCCCCCCeecCCCC---CCCceeeecceecCCCCEEEEEEeccCCCCCCcceE
Q 004816 150 FRIFGDTVIFSNYKD----QRLYKHSIDSKDSSPLPITPDY---GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTE 222 (729)
Q Consensus 150 ~~~~~~~i~~~~~~~----~~l~~~d~~~~~~~~~~lt~~~---~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~ 222 (729)
..++++.++|..... +.||+.+..+ ++.+.|.... ......+..++|||||++|+|..+..+.. ..+
T Consensus 79 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~----~~~ 152 (710)
T 2xdw_A 79 HFKKGKRYFYFYNTGLQNQRVLYVQDSLE--GEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSD----WVT 152 (710)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEESSTT--SCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCS----CEE
T ss_pred CEEECCEEEEEEEcCCceEEEEEEEcCCC--CCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCc----eEE
Confidence 348889998887543 2789999876 6666554321 01124567899999999999998765432 358
Q ss_pred EEEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCC--------CCCCcEEEEEEecCCCCeeeeEEecCCCC
Q 004816 223 IVAIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNM--------PWDKAELWVGYISENGDVYKRVCVAGFDP 294 (729)
Q Consensus 223 l~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~--------~~~~~~l~~~d~~~~g~~~~~~~~~~~~~ 294 (729)
|+++|+++|+..+++.......+++|||||+.|+|.+.+.... .+...+||++++. ++......+....+.
T Consensus 153 i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~-t~~~~~~~v~~~~~~ 231 (710)
T 2xdw_A 153 IKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLG-TDQSEDILCAEFPDE 231 (710)
T ss_dssp EEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETT-SCGGGCEEEECCTTC
T ss_pred EEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECC-CCcccceEEeccCCC
Confidence 9999999998877554332356799999999999998654310 1234679999998 565332334343220
Q ss_pred CccccccCceeCCCCc-EEEEEecCCC-ceEEEEEEcCC------C--eEEEeeccCccccCCcccccCcceeeeeecCC
Q 004816 295 TIVESPTEPKWSSKGE-LFFVTDRKNG-FWNLHKWIESN------N--EVLAIYSLDAEFSRPLWVFGINSYEIIQSHGE 364 (729)
Q Consensus 295 ~~~~~~~~~~wspDG~-l~~~~~~~~g-~~~l~~~d~~~------g--~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~ 364 (729)
. .....+.|||||+ |++.+..... ...||++|+++ + +.+.|+...... ...|++ +
T Consensus 232 ~--~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~------------d 296 (710)
T 2xdw_A 232 P--KWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTN------------E 296 (710)
T ss_dssp T--TCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEE------------E
T ss_pred C--eEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEec------------c
Confidence 1 2345789999999 8887765222 57899999986 5 466666432111 112332 7
Q ss_pred CCEEEEEEEECC-eEEEEEEECCCCc---eEeeccCCc--ceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc-ceee
Q 004816 365 KNLIACSYRQNG-RSYLGILDDFGHS---LSLLDIPFT--DIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK-LKAV 436 (729)
Q Consensus 365 ~~~l~~~s~~~g-~~~ly~~d~~~g~---~~~lt~~~~--~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~-~~~l 436 (729)
++.|++.++.++ ..+|++++++++. ++.|..+.. .+..+ ..+++.+++... .+....|+++++.+|+ .++|
T Consensus 297 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~-~~g~~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 297 GTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL-HDVKNTLQLHDLATGALLKIF 375 (710)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE-ETTEEEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEE-ECCEEEEEEEECCCCCEEEec
Confidence 888998887654 6789999998874 466665533 45556 344666665554 4445679999986554 4444
Q ss_pred e
Q 004816 437 D 437 (729)
Q Consensus 437 t 437 (729)
+
T Consensus 376 ~ 376 (710)
T 2xdw_A 376 P 376 (710)
T ss_dssp C
T ss_pred C
Confidence 3
No 168
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.68 E-value=1.5e-15 Score=155.06 Aligned_cols=216 Identities=12% Similarity=0.064 Sum_probs=135.1
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCc-cccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA-RGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGR 546 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~-~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~ 546 (729)
+|.++++.... ..|.||++||...+.. ...|...+..| +.||.|+++|+||.|.+.... . .
T Consensus 13 ~g~~l~y~~~G------------~g~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~---~-~- 74 (282)
T 1iup_A 13 AGVLTNYHDVG------------EGQPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVGFGFTDRPE---N-Y- 74 (282)
T ss_dssp TTEEEEEEEEC------------CSSEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTTSTTSCCCT---T-C-
T ss_pred CCEEEEEEecC------------CCCeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCCCCCCCCCC---C-C-
Confidence 68888765431 1256999999633222 22455555666 678999999999866543211 0 0
Q ss_pred CCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccCh----hH---Hhhh-----
Q 004816 547 WGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADL----SM---LRAE----- 613 (729)
Q Consensus 547 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~----~~---~~~~----- 613 (729)
....+++.+.+..+++.. +.+++.|+||||||.+|+.++. +|++++++|+.++.... .. ....
T Consensus 75 --~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (282)
T 1iup_A 75 --NYSKDSWVDHIIGIMDAL--EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIE 150 (282)
T ss_dssp --CCCHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHH
T ss_pred --CCCHHHHHHHHHHHHHHh--CCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcHH
Confidence 123444444444444432 3468999999999999999998 99999999999875421 00 0000
Q ss_pred -cch-----------hhhhhhhh---hcCCh---hhhhh------------c-CcccccCCCCCCEEEEEeCCCCCCChH
Q 004816 614 -THK-----------FESRYIDN---LVGSE---KDYYE------------K-SPINFVDKFSCPIILFQGLEDKVVPPD 662 (729)
Q Consensus 614 -~~~-----------~~~~~~~~---~~~~~---~~~~~------------~-sp~~~~~~i~~PvL~i~G~~D~~vp~~ 662 (729)
... ....+... ...++ ..+.. . .+...+.++++|+|+++|++|..+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~ 230 (282)
T 1iup_A 151 NMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLS 230 (282)
T ss_dssp HHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHH
T ss_pred HHHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHH
Confidence 000 00000000 00000 00000 0 011356789999999999999999999
Q ss_pred HHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 663 QARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 663 ~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
.+.++.+.+. ..++++++++||... .+...++.+.+.+|+.+.
T Consensus 231 ~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 273 (282)
T 1iup_A 231 SSLRLGELID----RAQLHVFGRCGHWTQ-IEQTDRFNRLVVEFFNEA 273 (282)
T ss_dssp HHHHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCC----CCeEEEECCCCCCcc-ccCHHHHHHHHHHHHhcC
Confidence 8888877764 569999999999753 355678888889999763
No 169
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.68 E-value=3.5e-15 Score=154.60 Aligned_cols=222 Identities=15% Similarity=0.079 Sum_probs=130.9
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchh
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE 538 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~ 538 (729)
+...+... +|..+++..+.+. ..|.||++||++++... ......+...||.|+++|+||.|.+...
T Consensus 12 ~~~~~~~~-~g~~l~y~~~G~~----------~g~pvvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~ 77 (313)
T 1azw_A 12 QQGSLKVD-DRHTLYFEQCGNP----------HGKPVVMLHGGPGGGCN---DKMRRFHDPAKYRIVLFDQRGSGRSTPH 77 (313)
T ss_dssp EEEEEECS-SSCEEEEEEEECT----------TSEEEEEECSTTTTCCC---GGGGGGSCTTTEEEEEECCTTSTTSBST
T ss_pred ccceEEcC-CCCEEEEEecCCC----------CCCeEEEECCCCCcccc---HHHHHhcCcCcceEEEECCCCCcCCCCC
Confidence 44556665 7888886655331 12568999998654322 2223445567999999999986654321
Q ss_pred HHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhH--------
Q 004816 539 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSM-------- 609 (729)
Q Consensus 539 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~-------- 609 (729)
. .......+++.+.+..+++.- +.+++.|+||||||.+++.++. +|++++++|+.++......
T Consensus 78 ---~---~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 149 (313)
T 1azw_A 78 ---A---DLVDNTTWDLVADIERLRTHL--GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQE 149 (313)
T ss_dssp ---T---CCTTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTS
T ss_pred ---c---ccccccHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccCchhhhHHHHhh
Confidence 0 011123444444444444442 3468999999999999999998 9999999999876432100
Q ss_pred ------------Hhhhcc-----hhhhhhhhhhc-------------------------CChh--------hh-------
Q 004816 610 ------------LRAETH-----KFESRYIDNLV-------------------------GSEK--------DY------- 632 (729)
Q Consensus 610 ------------~~~~~~-----~~~~~~~~~~~-------------------------~~~~--------~~------- 632 (729)
+..... .....+..... .... .+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (313)
T 1azw_A 150 GASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARI 229 (313)
T ss_dssp SHHHHCHHHHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHH
T ss_pred hhhhhchHHHHHHhhccCchhhhhhhhhhhhhccccCcchhhhhhhHHhhhhccccccccccccchhccccchhhHHHHh
Confidence 000000 00000000000 0000 00
Q ss_pred -----h--hc-C----cccccCCCC-CCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHH
Q 004816 633 -----Y--EK-S----PINFVDKFS-CPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFT 699 (729)
Q Consensus 633 -----~--~~-s----p~~~~~~i~-~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~ 699 (729)
. .. . ....+.+++ +|+|+++|++|.++|++.++++.+.+. ..++++++++||....++...+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~~~gH~~~~~~~~~~~ 305 (313)
T 1azw_A 230 ENHYFVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWP----KAQLQISPASGHSAFEPENVDAL 305 (313)
T ss_dssp HHHHHHTGGGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCT----TSEEEEETTCCSSTTSHHHHHHH
T ss_pred hhhhhcccccccccchhhhhcccccCCCEEEEecCCCCcCCHHHHHHHHhhCC----CcEEEEeCCCCCCcCCCccHHHH
Confidence 0 00 0 022345575 999999999999999999888887775 34899999999976444334444
Q ss_pred HHHHHHH
Q 004816 700 LEQQMVF 706 (729)
Q Consensus 700 ~~~~~~f 706 (729)
++.+.+|
T Consensus 306 ~~~i~~f 312 (313)
T 1azw_A 306 VRATDGF 312 (313)
T ss_dssp HHHHHHH
T ss_pred HHHHhhc
Confidence 4444444
No 170
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.68 E-value=6.7e-16 Score=153.13 Aligned_cols=195 Identities=15% Similarity=0.175 Sum_probs=124.9
Q ss_pred CCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHH----hCC
Q 004816 491 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLV----GSG 566 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~----~~~ 566 (729)
+.|+||++||.+... ..|. .+..|+ +||.|+++|+||.+..... .....++....+..++ ...
T Consensus 15 ~~~~vv~~hG~~~~~--~~~~-~~~~l~-~g~~v~~~d~~g~g~s~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3e0x_A 15 SPNTLLFVHGSGCNL--KIFG-ELEKYL-EDYNCILLDLKGHGESKGQ---------CPSTVYGYIDNVANFITNSEVTK 81 (245)
T ss_dssp CSCEEEEECCTTCCG--GGGT-TGGGGC-TTSEEEEECCTTSTTCCSC---------CCSSHHHHHHHHHHHHHHCTTTT
T ss_pred CCCEEEEEeCCcccH--HHHH-HHHHHH-hCCEEEEecCCCCCCCCCC---------CCcCHHHHHHHHHHHHHhhhhHh
Confidence 458999999985544 3344 555555 8999999999986654311 1123444444444444 112
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHh--CCCcceEEEEeccccChhHHh----hhcc------------------hhhhhhh
Q 004816 567 KADEKRLCITGGSAGGYTTLAALA--FRDTFKAGASLYGVADLSMLR----AETH------------------KFESRYI 622 (729)
Q Consensus 567 ~~d~~ri~i~G~S~GG~~a~~~~~--~~~~~~a~v~~~~~~d~~~~~----~~~~------------------~~~~~~~ 622 (729)
.++ ++.++|||+||.+++.++. +|+ ++++|+.+|........ .... .....+.
T Consensus 82 ~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (245)
T 3e0x_A 82 HQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEKYF 158 (245)
T ss_dssp TCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHHHHHH
T ss_pred hcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHHHHHH
Confidence 233 9999999999999998886 577 99999999876551110 0000 0000000
Q ss_pred hhhcCCh-------hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCccc
Q 004816 623 DNLVGSE-------KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAEN 695 (729)
Q Consensus 623 ~~~~~~~-------~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~ 695 (729)
......+ ......+....+.++++|+|+++|++|..+|++.+.++++.+. .+++++++++||.+.. +.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~ 233 (245)
T 3e0x_A 159 ETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVE----NSELKIFETGKHFLLV-VN 233 (245)
T ss_dssp TTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSS----SEEEEEESSCGGGHHH-HT
T ss_pred HHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcC----CceEEEeCCCCcceEE-ec
Confidence 0000011 1112334455678889999999999999999999888888764 5799999999997543 34
Q ss_pred HHHHHHHHHHH
Q 004816 696 IKFTLEQQMVF 706 (729)
Q Consensus 696 ~~~~~~~~~~f 706 (729)
..+..+.+.+|
T Consensus 234 ~~~~~~~i~~f 244 (245)
T 3e0x_A 234 AKGVAEEIKNF 244 (245)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhh
Confidence 44555555555
No 171
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.68 E-value=5.9e-15 Score=150.55 Aligned_cols=229 Identities=12% Similarity=0.130 Sum_probs=155.1
Q ss_pred EEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcC
Q 004816 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (729)
Q Consensus 150 ~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~ 229 (729)
|++++..+++.. ++.|+++++.+. ++..++.... ....+..++|||||++|++....... ...||.++++
T Consensus 49 ~spdg~~l~~~~--~~~i~~~d~~~~-~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~-----~~~l~~~~~~ 118 (297)
T 2ojh_A 49 WSPDGKYLLLNS--EGLLYRLSLAGD-PSPEKVDTGF--ATICNNDHGISPDGALYAISDKVEFG-----KSAIYLLPST 118 (297)
T ss_dssp ECTTSSEEEEEE--TTEEEEEESSSC-CSCEECCCTT--CCCBCSCCEECTTSSEEEEEECTTTS-----SCEEEEEETT
T ss_pred ECCCCCEEEEEc--CCeEEEEeCCCC-CCceEecccc--ccccccceEECCCCCEEEEEEeCCCC-----cceEEEEECC
Confidence 444455676664 668999999751 2345555331 12456789999999999988744321 3689999999
Q ss_pred CCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCC
Q 004816 230 GQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 309 (729)
Q Consensus 230 ~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG 309 (729)
+++.+.+..... ...++|||||++|+|..... ....||.+++. ++.. ..+.... ..+..+.|+|||
T Consensus 119 ~~~~~~~~~~~~-~~~~~~spdg~~l~~~~~~~-----~~~~l~~~~~~-~~~~---~~~~~~~----~~~~~~~~s~dg 184 (297)
T 2ojh_A 119 GGTPRLMTKNLP-SYWHGWSPDGKSFTYCGIRD-----QVFDIYSMDID-SGVE---TRLTHGE----GRNDGPDYSPDG 184 (297)
T ss_dssp CCCCEECCSSSS-EEEEEECTTSSEEEEEEEET-----TEEEEEEEETT-TCCE---EECCCSS----SCEEEEEECTTS
T ss_pred CCceEEeecCCC-ccceEECCCCCEEEEEECCC-----CceEEEEEECC-CCcc---eEcccCC----CccccceECCCC
Confidence 888888765543 56689999999999877433 23468888776 5553 2233332 445678999999
Q ss_pred c-EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEEC--------CeEEE
Q 004816 310 E-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN--------GRSYL 380 (729)
Q Consensus 310 ~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~--------g~~~l 380 (729)
+ +++.... .+...||.+++.+++.+.+.........+.|++ +++.|++.+... +...|
T Consensus 185 ~~l~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~------------dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 185 RWIYFNSSR-TGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP------------SGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp SEEEEEECT-TSSCEEEEEETTSSCEEECCCCSEEEEEEEECT------------TSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred CEEEEEecC-CCCccEEEECCCCCCcEEEecCCcccCCeEECC------------CCCEEEEEEcCCCCCcccccCceEE
Confidence 9 7777765 577899999988888887775443444455554 788888887765 34789
Q ss_pred EEEECCCCceEeecc---CCcceEEe--eeeCCEEEEEEe
Q 004816 381 GILDDFGHSLSLLDI---PFTDIDNI--TLGNDCLFVEGA 415 (729)
Q Consensus 381 y~~d~~~g~~~~lt~---~~~~v~~~--~~~~~~~~~~~~ 415 (729)
+++++++++.+.+.. ....+..+ +++++.+++...
T Consensus 252 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 252 QLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred EEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEe
Confidence 999999988766653 23344444 445555555444
No 172
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.68 E-value=1.1e-15 Score=157.35 Aligned_cols=218 Identities=17% Similarity=0.124 Sum_probs=136.7
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCC-CCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGP-TSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGR 546 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~-~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~ 546 (729)
+|.++++.... . .|.||++||.. +......|...+..|++. |.|+++|+||.|.+. . . .
T Consensus 24 ~g~~l~y~~~g-----------~-g~~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~-~---~-~-- 83 (296)
T 1j1i_A 24 GGVETRYLEAG-----------K-GQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLGFGKTA-K---P-D-- 83 (296)
T ss_dssp TTEEEEEEEEC-----------C-SSEEEEECCCSTTCCHHHHHTTTHHHHTTT-SEEEEECCTTSTTSC-C---C-S--
T ss_pred CCEEEEEEecC-----------C-CCeEEEECCCCCCcchHHHHHHHHHHHhhc-CEEEEECCCCCCCCC-C---C-C--
Confidence 78888755431 1 25799999973 323344566667777665 999999999766543 1 0 0
Q ss_pred CCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChh-------HHhhhcc--h
Q 004816 547 WGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLS-------MLRAETH--K 616 (729)
Q Consensus 547 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~-------~~~~~~~--~ 616 (729)
.....++....+..+++...+ .+++.|+||||||.+++.++. +|++++++|+.++..... ....... .
T Consensus 84 -~~~~~~~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (296)
T 1j1i_A 84 -IEYTQDRRIRHLHDFIKAMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTRE 161 (296)
T ss_dssp -SCCCHHHHHHHHHHHHHHSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHH
T ss_pred -CCCCHHHHHHHHHHHHHhcCC-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCch
Confidence 012244444444433333222 168999999999999999988 999999999988754210 0000000 0
Q ss_pred hhhhhhhhhcC------------------Ch---hhhh-----------hcCcccccCCCCCCEEEEEeCCCCCCChHHH
Q 004816 617 FESRYIDNLVG------------------SE---KDYY-----------EKSPINFVDKFSCPIILFQGLEDKVVPPDQA 664 (729)
Q Consensus 617 ~~~~~~~~~~~------------------~~---~~~~-----------~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~ 664 (729)
.....+..... .+ ..+. .......+.++++|+|+++|++|.++|++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~ 241 (296)
T 1j1i_A 162 GMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETA 241 (296)
T ss_dssp HHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHH
T ss_pred HHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHH
Confidence 00000000000 00 0000 0112234678899999999999999999998
Q ss_pred HHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 665 RKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 665 ~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
.++.+.+. ..++++++++||... .+...++.+.+.+|+.+.+.
T Consensus 242 ~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 284 (296)
T 1j1i_A 242 YKFLDLID----DSWGYIIPHCGHWAM-IEHPEDFANATLSFLSLRVD 284 (296)
T ss_dssp HHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHHC--
T ss_pred HHHHHHCC----CCEEEEECCCCCCch-hcCHHHHHHHHHHHHhccCC
Confidence 88877764 568999999999754 35567888999999998875
No 173
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.68 E-value=4e-15 Score=159.04 Aligned_cols=246 Identities=13% Similarity=0.136 Sum_probs=157.1
Q ss_pred CcEEEEeecc-CCCeE--EEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCC--Ccccc----------------ch-hhh
Q 004816 457 LPELIEFPTE-VPGQK--AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS--EARGI----------------LN-LSI 514 (729)
Q Consensus 457 ~~~~~~~~~~-~dG~~--l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~--~~~~~----------------~~-~~~ 514 (729)
+..++.|.+. .+|.. +.+.++.|.+. ..+.|+|.+.||..+. .+.+. +. .++
T Consensus 74 ~a~ri~Y~std~~G~p~~~~gtv~~P~~~------~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~ 147 (462)
T 3guu_A 74 ASFQLQYRTTNTQNEAVADVATVWIPAKP------ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPII 147 (462)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECSSC------CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHH
T ss_pred eEEEEEEEEECCCCCEEEEEEEEEecCCC------CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHH
Confidence 4567777765 24554 78889999772 2347999999996432 22211 11 245
Q ss_pred HHH-hhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C-
Q 004816 515 QYW-TSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F- 591 (729)
Q Consensus 515 ~~l-a~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~- 591 (729)
..| +++||+|+++||+|.+. .|..... ....+.|..+++..+. +.-...+++++|||+||..+++++. +
T Consensus 148 ~~~~l~~G~~Vv~~Dy~G~G~---~y~~~~~---~~~~vlD~vrAa~~~~--~~~~~~~v~l~G~S~GG~aal~aa~~~~ 219 (462)
T 3guu_A 148 IGWALQQGYYVVSSDHEGFKA---AFIAGYE---EGMAILDGIRALKNYQ--NLPSDSKVALEGYSGGAHATVWATSLAE 219 (462)
T ss_dssp HHHHHHTTCEEEEECTTTTTT---CTTCHHH---HHHHHHHHHHHHHHHT--TCCTTCEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEecCCCCCC---cccCCcc---hhHHHHHHHHHHHHhc--cCCCCCCEEEEeeCccHHHHHHHHHhCh
Confidence 666 89999999999998664 2221110 0012345554444443 2213479999999999999998876 3
Q ss_pred ---CC-cceEEEEeccccChhHHhhhcch-------------hhhhh------hhhhcC---------------------
Q 004816 592 ---RD-TFKAGASLYGVADLSMLRAETHK-------------FESRY------IDNLVG--------------------- 627 (729)
Q Consensus 592 ---~~-~~~a~v~~~~~~d~~~~~~~~~~-------------~~~~~------~~~~~~--------------------- 627 (729)
|+ .++++++.++..|+......... +...| +...+.
T Consensus 220 ~yapel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~ 299 (462)
T 3guu_A 220 SYAPELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVV 299 (462)
T ss_dssp HHCTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHH
T ss_pred hhcCccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHH
Confidence 33 68999999988877554221000 00000 000000
Q ss_pred ------Ch----------------hhhhhcCccc-----ccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEE
Q 004816 628 ------SE----------------KDYYEKSPIN-----FVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVAL 680 (729)
Q Consensus 628 ------~~----------------~~~~~~sp~~-----~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 680 (729)
+. +.+.+...-. ...++++|+|++||.+|.+||+++++++++.++++|.++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~ 379 (462)
T 3guu_A 300 LTYPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINF 379 (462)
T ss_dssp HHCTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEE
T ss_pred HhhccCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEE
Confidence 00 0011111100 12356789999999999999999999999999999999999
Q ss_pred EEECCCCcccCCcccHHHHHHHHHHHHHHHhCCCCCCCC-CC
Q 004816 681 VEYEGEQHGFRKAENIKFTLEQQMVFFARVVGHFDVADE-II 721 (729)
Q Consensus 681 ~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~~-~~ 721 (729)
++|++++|.... ...+..+++|++++|.+. .... |.
T Consensus 380 ~~y~~~~H~~~~----~~~~~d~l~WL~~r~~G~-~~~~~C~ 416 (462)
T 3guu_A 380 SPYPIAEHLTAE----IFGLVPSLWFIKQAFDGT-TPKVICG 416 (462)
T ss_dssp EEESSCCHHHHH----HHTHHHHHHHHHHHHHTC-CCCCCTT
T ss_pred EEECcCCccCch----hhhHHHHHHHHHHHhCCC-CCCCCCC
Confidence 999999997543 234678899999999866 4434 44
No 174
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.68 E-value=1.1e-16 Score=171.37 Aligned_cols=225 Identities=16% Similarity=0.096 Sum_probs=150.4
Q ss_pred CCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcE----EEEecCCC
Q 004816 456 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWA----FVDVNYGG 531 (729)
Q Consensus 456 ~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~----v~~~d~rG 531 (729)
.+.+.+++.+...|..+.+++|.|.+.. .+++|+|+++||+.+... ..+...++.|+++|+. |+.+|++|
T Consensus 166 G~v~~~~~~S~~~g~~~~~~vy~P~~~~-----~~~~PvlvllHG~~~~~~-~~~~~~~~~l~~~g~~~p~iVV~~d~~~ 239 (403)
T 3c8d_A 166 IPAKEIIWKSERLKNSRRVWIFTTGDVT-----AEERPLAVLLDGEFWAQS-MPVWPVLTSLTHRQQLPPAVYVLIDAID 239 (403)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEC----------CCCCEEEESSHHHHHHT-SCCHHHHHHHHHTTSSCSCEEEEECCCS
T ss_pred CceEEEEEEccccCCcEEEEEEeCCCCC-----CCCCCEEEEeCCHHHhhc-CcHHHHHHHHHHcCCCCCeEEEEECCCC
Confidence 3567888887657888999999997621 467899999999633211 1234467788888875 99999985
Q ss_pred CCCCchhHHHhhccCCCcccHHHH--HHHHHHHHhCC--CCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccC
Q 004816 532 STGYGREFRERLLGRWGIVDVNDC--CSCATFLVGSG--KADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVAD 606 (729)
Q Consensus 532 s~g~g~~~~~~~~~~~~~~~~~D~--~~~~~~l~~~~--~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d 606 (729)
..+ +..... ......|. ..++.++.++. ..|+++++|+|+||||++|+.++. +|++|+++++.+|..+
T Consensus 240 ~~~-----r~~~~~--~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~ 312 (403)
T 3c8d_A 240 TTH-----RAHELP--CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYW 312 (403)
T ss_dssp HHH-----HHHHSS--SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTT
T ss_pred Ccc-----ccccCC--ChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccc
Confidence 221 111111 11123332 34666776653 357899999999999999999988 9999999999999875
Q ss_pred hhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCC
Q 004816 607 LSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGE 686 (729)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 686 (729)
+...... ....+. +.+.. ........|++++||+.|..+ ..++++++++|+++|+++++++++|
T Consensus 313 ~~~~~~~---~~~~~~-------~~~~~----~~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G- 376 (403)
T 3c8d_A 313 WPHRGGQ---QEGVLL-------EKLKA----GEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG- 376 (403)
T ss_dssp TTCTTSS---SCCHHH-------HHHHT----TSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-
T ss_pred cCCCCCC---cHHHHH-------HHHHh----ccccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC-
Confidence 4321000 000000 01111 012345678999999988643 6889999999999999999999999
Q ss_pred CcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 687 QHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 687 gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
+|.+ ..+...+...+.||.+...
T Consensus 377 gH~~---~~w~~~l~~~l~~l~~~~~ 399 (403)
T 3c8d_A 377 GHDA---LCWRGGLMQGLIDLWQPLF 399 (403)
T ss_dssp CSCH---HHHHHHHHHHHHHHHGGGT
T ss_pred CCCH---HHHHHHHHHHHHHHhcccc
Confidence 6974 2445667777888877654
No 175
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.68 E-value=2.3e-16 Score=172.45 Aligned_cols=229 Identities=11% Similarity=0.071 Sum_probs=139.6
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccc-cchhhhH---HHhhCCcEEEEecCCCCCCCchhHHHhh
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQ---YWTSRGWAFVDVNYGGSTGYGREFRERL 543 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~~~---~la~~G~~v~~~d~rGs~g~g~~~~~~~ 543 (729)
+|.++++..+.+.+ ..+.|+||++||.+++.... .|...+. .|++.||.|+++|+||+ ++|.+-....
T Consensus 92 ~g~~l~y~~~G~~~-------~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~-~~G~S~~~~~ 163 (444)
T 2vat_A 92 RDVPVAYKSWGRMN-------VSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGS-PFGSAGPCSP 163 (444)
T ss_dssp EEEEEEEEEESCCC-------TTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTC-SSSSSSTTSB
T ss_pred cceeEEEEEecCCC-------CCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCC-CCCCCCCCCC
Confidence 34456655554432 23357899999986555431 1444443 46688999999999984 1232211000
Q ss_pred c---c-------CCCcccHHHHHHHHHHHHhCCCCCCCc-EEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHh
Q 004816 544 L---G-------RWGIVDVNDCCSCATFLVGSGKADEKR-LCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLR 611 (729)
Q Consensus 544 ~---~-------~~~~~~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~ 611 (729)
. + ++.....+|+.+.+..+++.- +.++ +.++||||||.+++.++. +|++++++|+.++........
T Consensus 164 ~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l--~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~ 241 (444)
T 2vat_A 164 DPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRL--GVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWC 241 (444)
T ss_dssp CTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHH--TCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHH
T ss_pred CcccccccccccccccccHHHHHHHHHHHHHhc--CCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccc
Confidence 0 0 011234555555555554442 3467 999999999999999998 999999999998865421100
Q ss_pred ------------hh-------------------------------cchhhhhhhhhhc----------------------
Q 004816 612 ------------AE-------------------------------THKFESRYIDNLV---------------------- 626 (729)
Q Consensus 612 ------------~~-------------------------------~~~~~~~~~~~~~---------------------- 626 (729)
.. ...+...+.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (444)
T 2vat_A 242 AAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSG 321 (444)
T ss_dssp HHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC--------------------
T ss_pred hhHHHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCcccccccccccccccccccccccc
Confidence 00 0000000000000
Q ss_pred --------------------------CChh-------hhhhc--------CcccccCCCCCCEEEEEeCCCCCCChHHHH
Q 004816 627 --------------------------GSEK-------DYYEK--------SPINFVDKFSCPIILFQGLEDKVVPPDQAR 665 (729)
Q Consensus 627 --------------------------~~~~-------~~~~~--------sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~ 665 (729)
.+.. .+... +....+.++++|+|+++|++|.++|++.++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~ 401 (444)
T 2vat_A 322 NSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHV 401 (444)
T ss_dssp -------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHH
T ss_pred ccccccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHH
Confidence 0000 00000 133446789999999999999999999998
Q ss_pred HHHHHHHhCCCCEEEEEEC-CCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 666 KIYKALKENGLPVALVEYE-GEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 666 ~~~~~l~~~g~~~~~~~~~-~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
++++.+. .+++++++ ++||.... +...++.+.+.+||++++
T Consensus 402 ~l~~~~p----~~~~~~i~~~~GH~~~~-e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 402 EMGRSIP----NSRLCVVDTNEGHDFFV-MEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp HHHHHST----TEEEEECCCSCGGGHHH-HTHHHHHHHHHHHHTC--
T ss_pred HHHHHCC----CcEEEEeCCCCCcchHH-hCHHHHHHHHHHHHHHhc
Confidence 8888775 56999999 89997543 456778888888987665
No 176
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.68 E-value=9.7e-16 Score=162.24 Aligned_cols=120 Identities=15% Similarity=0.106 Sum_probs=84.4
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++....|.+ ...|+||++||.+.+. ..|...+..|+++||.|+++|+||.|....... .
T Consensus 11 ~g~~l~y~~~G~~~--------~~~~~vv~~hG~~~~~--~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~---~--- 74 (356)
T 2e3j_A 11 RGTRIHAVADSPPD--------QQGPLVVLLHGFPESW--YSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRV---Q--- 74 (356)
T ss_dssp TTEEEEEEEECCTT--------CCSCEEEEECCTTCCG--GGGTTTHHHHHHTTCEEEEECCTTSTTSCCCCS---G---
T ss_pred CCeEEEEEEecCCC--------CCCCEEEEECCCCCcH--HHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCc---c---
Confidence 78999988776542 2357899999985443 446667888999999999999998665432110 0
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEecccc
Q 004816 548 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVA 605 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~ 605 (729)
.....+++...+..+++. ++.+++.++|||+||.+++.++. +|++++++|+.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 75 KAYRIKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp GGGSHHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred cccCHHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 011233333333333332 24578999999999999999988 999999999988654
No 177
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.68 E-value=2.1e-15 Score=174.53 Aligned_cols=265 Identities=10% Similarity=0.001 Sum_probs=176.5
Q ss_pred ceEEEECCEEEEEECCC----CcEEEEeCCCCCCCCeecCCCCC---CCceeeecceecCCCCEEEEEEeccCCCCCCcc
Q 004816 148 GAFRIFGDTVIFSNYKD----QRLYKHSIDSKDSSPLPITPDYG---EPLVSYADGIFDPRFNRYVTVREDRRQDALNST 220 (729)
Q Consensus 148 ~~~~~~~~~i~~~~~~~----~~l~~~d~~~~~~~~~~lt~~~~---~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~ 220 (729)
....++++.++|..... ..||+.+..+ ++.++|+..+. .....+..++|||||++|+|+.+..+.+ .
T Consensus 73 ~~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~----~ 146 (695)
T 2bkl_A 73 STPSRRNGRFFYVRTHKDKEKAILYWRQGES--GQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAAD----E 146 (695)
T ss_dssp CCCEEETTEEEEEEECTTCSSCEEEEEESTT--SCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCS----C
T ss_pred CCCEEECCEEEEEEEcCCCeEEEEEEEcCCC--CCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCc----e
Confidence 34557899999987654 3689999877 77888876421 1123578899999999999998765432 3
Q ss_pred eEEEEEEcCCCceEEeee-CCCeeeeeeeCCCCCeEEEEEecCCCC-----CCCCcEEEEEEecCCCCeeeeEEecCCCC
Q 004816 221 TEIVAIALNGQNIQVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNM-----PWDKAELWVGYISENGDVYKRVCVAGFDP 294 (729)
Q Consensus 221 ~~l~~~dl~~g~~~~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~-----~~~~~~l~~~d~~~~g~~~~~~~~~~~~~ 294 (729)
..|+++|+++|+..+... .......++|||||+.|+|.+.+..+. .+...+||++++. ++......+....+.
T Consensus 147 ~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~-t~~~~~~lv~~~~~~ 225 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLG-TEPSKDTVVHERTGD 225 (695)
T ss_dssp CEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETT-SCGGGCEEEECCCCC
T ss_pred EEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECC-CCchhceEEEecCCC
Confidence 689999999998641111 111226799999999999999655310 0235679999998 565322334443321
Q ss_pred CccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEE
Q 004816 295 TIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR 373 (729)
Q Consensus 295 ~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~ 373 (729)
. .....+.|||||+ |++.+....+...||+++..+++.+.|+........+.| + +++ +|+.++
T Consensus 226 ~--~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~------------~g~-l~~~s~ 289 (695)
T 2bkl_A 226 P--TTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-W------------KDR-FYVLTD 289 (695)
T ss_dssp T--TCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-E------------TTE-EEEEEC
T ss_pred C--EEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-c------------CCc-EEEEEC
Confidence 1 2445789999999 888877622677899998878888888754322222223 1 666 877776
Q ss_pred EC-CeEEEEEEECCCCc---eEeeccC--CcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcceee
Q 004816 374 QN-GRSYLGILDDFGHS---LSLLDIP--FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAV 436 (729)
Q Consensus 374 ~~-g~~~ly~~d~~~g~---~~~lt~~--~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~l 436 (729)
.+ +...|+++++++++ ++.|..+ ...+..+...++.+++... .+....|+.++++++..++|
T Consensus 290 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~-~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 290 EGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYL-KDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp TTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEE-ETTEEEEEEEETTCCEEEEC
T ss_pred CCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEE-ECCEEEEEEEeCCCCeeEEe
Confidence 54 46789999998876 3566544 3446666444666665554 45556799999876655444
No 178
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.68 E-value=7.9e-16 Score=157.75 Aligned_cols=215 Identities=14% Similarity=0.109 Sum_probs=136.2
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++..+.+. ..|+||++||.+... ..|...+..|+ +||.|+++|+||.|......
T Consensus 18 ~g~~l~~~~~g~~----------~~~~vl~lHG~~~~~--~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~-------- 76 (299)
T 3g9x_A 18 LGERMHYVDVGPR----------DGTPVLFLHGNPTSS--YLWRNIIPHVA-PSHRCIAPDLIGMGKSDKPD-------- 76 (299)
T ss_dssp TTEEEEEEEESCS----------SSCCEEEECCTTCCG--GGGTTTHHHHT-TTSCEEEECCTTSTTSCCCC--------
T ss_pred CCeEEEEEecCCC----------CCCEEEEECCCCccH--HHHHHHHHHHc-cCCEEEeeCCCCCCCCCCCC--------
Confidence 7888887766442 236799999985543 45666677775 59999999999876543221
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhh---h---------c
Q 004816 548 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRA---E---------T 614 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~---~---------~ 614 (729)
.....+++.+.+..+++. ++.+++.++|||+||.+++.++. +|++++++|+.++......... . .
T Consensus 77 ~~~~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (299)
T 3g9x_A 77 LDYFFDDHVRYLDAFIEA--LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRT 154 (299)
T ss_dssp CCCCHHHHHHHHHHHHHH--TTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTS
T ss_pred CcccHHHHHHHHHHHHHH--hCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcC
Confidence 123355555555555554 24568999999999999999998 9999999999985433220000 0 0
Q ss_pred -----------chhhhhhhhhhcC---Ch--------------------hhhhhc--------------CcccccCCCCC
Q 004816 615 -----------HKFESRYIDNLVG---SE--------------------KDYYEK--------------SPINFVDKFSC 646 (729)
Q Consensus 615 -----------~~~~~~~~~~~~~---~~--------------------~~~~~~--------------sp~~~~~~i~~ 646 (729)
..+...+...... .. ..+... +....+.++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 234 (299)
T 3g9x_A 155 ADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPV 234 (299)
T ss_dssp SSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCS
T ss_pred CCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCC
Confidence 0000000000000 00 000000 01122467899
Q ss_pred CEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 647 PIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 647 PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
|+|+++|++|..+|++.+.++.+.+. .+++++++++||.+. .+...++.+.+.+++.+.
T Consensus 235 P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~~~~~~ 293 (299)
T 3g9x_A 235 PKLLFWGTPGVLIPPAEAARLAESLP----NCKTVDIGPGLHYLQ-EDNPDLIGSEIARWLPAL 293 (299)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHST----TEEEEEEEEESSCHH-HHCHHHHHHHHHHHSGGG
T ss_pred CeEEEecCCCCCCCHHHHHHHHhhCC----CCeEEEeCCCCCcch-hcCHHHHHHHHHHHHhhh
Confidence 99999999999999999988887764 568999999999753 244455555555555443
No 179
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.68 E-value=1.4e-15 Score=156.34 Aligned_cols=226 Identities=10% Similarity=0.055 Sum_probs=134.0
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCch
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGR 537 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~ 537 (729)
.+...+.. +|.++++.... +.|.||++||.+.+. ..|...+..|.+ ||.|+++|+||.|....
T Consensus 13 ~~~~~~~~--~g~~l~~~~~g------------~~~~vv~lHG~~~~~--~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~ 75 (306)
T 3r40_A 13 FGSEWINT--SSGRIFARVGG------------DGPPLLLLHGFPQTH--VMWHRVAPKLAE-RFKVIVADLPGYGWSDM 75 (306)
T ss_dssp CEEEEECC--TTCCEEEEEEE------------CSSEEEEECCTTCCG--GGGGGTHHHHHT-TSEEEEECCTTSTTSCC
T ss_pred CceEEEEe--CCEEEEEEEcC------------CCCeEEEECCCCCCH--HHHHHHHHHhcc-CCeEEEeCCCCCCCCCC
Confidence 34444544 78888866542 236899999985443 456777888877 99999999998765433
Q ss_pred hHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhc--
Q 004816 538 EFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAET-- 614 (729)
Q Consensus 538 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~-- 614 (729)
.... ........+++...+..+++. ++.+++.++|||+||.+++.++. +|++++++|+.++...........
T Consensus 76 ~~~~---~~~~~~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 150 (306)
T 3r40_A 76 PESD---EQHTPYTKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRA 150 (306)
T ss_dssp CCCC---TTCGGGSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHH
T ss_pred CCCC---cccCCCCHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhh
Confidence 2110 000112345555555544444 24468999999999999999998 999999999999754321110000
Q ss_pred --------------------------chhhhhhhhhhc-----C--Chh---h-----------------hhhc------
Q 004816 615 --------------------------HKFESRYIDNLV-----G--SEK---D-----------------YYEK------ 635 (729)
Q Consensus 615 --------------------------~~~~~~~~~~~~-----~--~~~---~-----------------~~~~------ 635 (729)
..+...+..... . ..+ . +...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (306)
T 3r40_A 151 YALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFE 230 (306)
T ss_dssp HHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHH
T ss_pred hhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccch
Confidence 000000000000 0 000 0 0000
Q ss_pred ---CcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 636 ---SPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 636 ---sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
.....+.++++|+|+++|++|.++|.....+.++.+. .+++++++ ++||.+. .+...++.+.+.+||++.
T Consensus 231 ~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~-~~gH~~~-~e~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 231 HDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWA---SDVQGAPI-ESGHFLP-EEAPDQTAEALVRFFSAA 303 (306)
T ss_dssp HHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHHB---SSEEEEEE-SSCSCHH-HHSHHHHHHHHHHHHHC-
T ss_pred hhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhc---CCCeEEEe-cCCcCch-hhChHHHHHHHHHHHHhc
Confidence 0001347889999999999999998655555555443 36678888 6799753 356677888888998764
No 180
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.67 E-value=5.4e-16 Score=157.33 Aligned_cols=204 Identities=13% Similarity=0.069 Sum_probs=127.8
Q ss_pred CEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHH-HhhccCCCcccHHHHHHHHHHHHhCCCCCCC
Q 004816 493 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFR-ERLLGRWGIVDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 493 P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~-~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
|.||++||.+.+ ...|...+..|++ +|.|+++|+||.|.+..... ......+ ....+|+.+.++.+ +.+
T Consensus 21 ~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~-~~~a~dl~~~l~~l------~~~ 90 (271)
T 1wom_A 21 ASIMFAPGFGCD--QSVWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYDLNRYQTL-DGYAQDVLDVCEAL------DLK 90 (271)
T ss_dssp SEEEEECCTTCC--GGGGTTTGGGGTT-TSEEEECCCSCCSSSCCTTCCTTGGGSH-HHHHHHHHHHHHHT------TCS
T ss_pred CcEEEEcCCCCc--hhhHHHHHHHHHh-cCeEEEECCCCCCCCCCCcccccccccH-HHHHHHHHHHHHHc------CCC
Confidence 789999997443 3456666777765 69999999998765432110 0000000 01134444444433 346
Q ss_pred cEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChh----------------HHhhh----cchhhhhhhhhhcC---
Q 004816 572 RLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLS----------------MLRAE----THKFESRYIDNLVG--- 627 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~----------------~~~~~----~~~~~~~~~~~~~~--- 627 (729)
++.++||||||.+++.++. +|++++++|+.++..... .+... ...+...+.....+
T Consensus 91 ~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (271)
T 1wom_A 91 ETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPD 170 (271)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTT
T ss_pred CeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 8999999999999999988 999999999987642100 00000 00000000000000
Q ss_pred ---------------Chhhh-------hhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECC
Q 004816 628 ---------------SEKDY-------YEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEG 685 (729)
Q Consensus 628 ---------------~~~~~-------~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 685 (729)
.+... ...+....+.++++|+|+++|++|..+|++.++.+.+.+. ..+++++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~ 246 (271)
T 1wom_A 171 RPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLP----YSSLKQMEA 246 (271)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSS----SEEEEEEEE
T ss_pred chHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCC----CCEEEEeCC
Confidence 00000 0112223467899999999999999999988887777654 469999999
Q ss_pred CCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 686 EQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 686 ~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
+||... .+...++.+.+.+|+.+++
T Consensus 247 ~gH~~~-~e~p~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 247 RGHCPH-MSHPDETIQLIGDYLKAHV 271 (271)
T ss_dssp ESSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred CCcCcc-ccCHHHHHHHHHHHHHhcC
Confidence 999753 3556788889999998763
No 181
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.67 E-value=2.2e-15 Score=154.28 Aligned_cols=201 Identities=13% Similarity=0.099 Sum_probs=126.8
Q ss_pred CEEEEEcCCC-CCCccccchhhh-HHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCC
Q 004816 493 PLLVKSHGGP-TSEARGILNLSI-QYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 570 (729)
Q Consensus 493 P~vv~~hGg~-~~~~~~~~~~~~-~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 570 (729)
|.||++||.+ +......|...+ ..|++. |.|+++|+||.|.+.... . .....+++...+..+++.. +.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~-----~--~~~~~~~~~~~l~~~l~~l--~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEAG-YRVILLDCPGWGKSDSVV-----N--SGSRSDLNARILKSVVDQL--DI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHTT-CEEEEECCTTSTTSCCCC-----C--SSCHHHHHHHHHHHHHHHT--TC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhcC-CeEEEEcCCCCCCCCCCC-----c--cccCHHHHHHHHHHHHHHh--CC
Confidence 4899999963 223334455556 666654 999999999876543221 0 0123555555555555442 34
Q ss_pred CcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccC------------hhHHhhh---cc-hhhhhhhhhhc-------
Q 004816 571 KRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVAD------------LSMLRAE---TH-KFESRYIDNLV------- 626 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d------------~~~~~~~---~~-~~~~~~~~~~~------- 626 (729)
+++.|+||||||.+++.++. +|++++++|+.++... +...... .. .....+.....
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLT 186 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCC
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCC
Confidence 78999999999999999988 9999999999887532 0000000 00 00000000000
Q ss_pred ------------CChhhhh------------hcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEE
Q 004816 627 ------------GSEKDYY------------EKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVE 682 (729)
Q Consensus 627 ------------~~~~~~~------------~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 682 (729)
..+..+. ..+....+.++++|+|+++|++|..+|++.++++.+.+. ..++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~----~~~~~~ 262 (289)
T 1u2e_A 187 DALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIA----GSELHI 262 (289)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHST----TCEEEE
T ss_pred HHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCC----CcEEEE
Confidence 0010000 011224567889999999999999999999988887765 348999
Q ss_pred ECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 683 YEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 683 ~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
++++||.... +...++.+.+.+|+.
T Consensus 263 i~~~gH~~~~-e~p~~~~~~i~~fl~ 287 (289)
T 1u2e_A 263 FRDCGHWAQW-EHADAFNQLVLNFLA 287 (289)
T ss_dssp ESSCCSCHHH-HTHHHHHHHHHHHHT
T ss_pred eCCCCCchhh-cCHHHHHHHHHHHhc
Confidence 9999997532 445677777778874
No 182
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.67 E-value=1.3e-15 Score=156.46 Aligned_cols=216 Identities=15% Similarity=0.083 Sum_probs=134.0
Q ss_pred CC-eEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCC-CCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhcc
Q 004816 468 PG-QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGG-PTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLG 545 (729)
Q Consensus 468 dG-~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~ 545 (729)
+| .++++....+ ++.|.||++||. |+......|...+..|++. |.|+++|+||.|.+.... .
T Consensus 21 ~g~~~l~y~~~G~----------g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~-----~ 84 (291)
T 2wue_A 21 DGPLKLHYHEAGV----------GNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGYGHSDKRA-----E 84 (291)
T ss_dssp SSEEEEEEEEECT----------TCSSEEEEECCCCTTCCHHHHTTTTHHHHTTT-SEEEEECCTTSTTSCCCS-----C
T ss_pred CCcEEEEEEecCC----------CCCCcEEEECCCCCccchHHHHHHHHHHHHhc-CEEEEECCCCCCCCCCCC-----C
Confidence 78 8888655421 123689999997 3333344566667777765 999999999866543211 0
Q ss_pred CCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccCh---------hHH---hh
Q 004816 546 RWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADL---------SML---RA 612 (729)
Q Consensus 546 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~---------~~~---~~ 612 (729)
.....+++...+..+++.- +.+++.|+||||||.+++.++. +|++++++|+.++.... ... ..
T Consensus 85 --~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 160 (291)
T 2wue_A 85 --HGQFNRYAAMALKGLFDQL--GLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSK 160 (291)
T ss_dssp --CSSHHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHH
T ss_pred --CCcCHHHHHHHHHHHHHHh--CCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHH
Confidence 0122334333333333321 3468999999999999999998 99999999999875310 000 00
Q ss_pred h---cc-hhhhhhhhhhc------------------CChhh----hhh----cC-----cc--cccCCCCCCEEEEEeCC
Q 004816 613 E---TH-KFESRYIDNLV------------------GSEKD----YYE----KS-----PI--NFVDKFSCPIILFQGLE 655 (729)
Q Consensus 613 ~---~~-~~~~~~~~~~~------------------~~~~~----~~~----~s-----p~--~~~~~i~~PvL~i~G~~ 655 (729)
. .. .....++.... .++.. +.. .+ .. ..+.++++|+|+++|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 240 (291)
T 2wue_A 161 FSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGRE 240 (291)
T ss_dssp HHHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETT
T ss_pred HhccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCC
Confidence 0 00 00000000000 01100 000 00 11 45678899999999999
Q ss_pred CCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 656 DKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 656 D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
|..+|++.++++++.+. .+++++++++||... .+...++.+.+.+|+.
T Consensus 241 D~~~~~~~~~~~~~~~p----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 288 (291)
T 2wue_A 241 DRVNPLDGALVALKTIP----RAQLHVFGQCGHWVQ-VEKFDEFNKLTIEFLG 288 (291)
T ss_dssp CSSSCGGGGHHHHHHST----TEEEEEESSCCSCHH-HHTHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHCC----CCeEEEeCCCCCChh-hhCHHHHHHHHHHHHh
Confidence 99999998888877664 569999999999753 2445677777778774
No 183
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.66 E-value=1.2e-14 Score=148.46 Aligned_cols=238 Identities=14% Similarity=0.171 Sum_probs=169.1
Q ss_pred CceEEEECCEEEEEECC-CCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCC-CC----Ccc
Q 004816 147 GGAFRIFGDTVIFSNYK-DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD-AL----NST 220 (729)
Q Consensus 147 ~~~~~~~~~~i~~~~~~-~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~-~~----~~~ 220 (729)
++-++.+++.|+|.... .+.||+++.++ ...++|+.. ..--++|+|++|+|+....... .. -..
T Consensus 18 ~g~~~~~g~~iy~~n~~d~~~ly~~~~dg--~~~~~l~~~--------~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~ 87 (302)
T 3s25_A 18 AGLFCESDGEVFFSNTNDNGRLYAMNIDG--SNIHKLSND--------TAMYINADKNYVYYVRNNNQKITSQTFFSYDR 87 (302)
T ss_dssp TTCEEEETTEEEEEEGGGTTEEEEEETTS--CSCEEEEEE--------EEEEEEECSSEEEEEEECC------CCSSCCS
T ss_pred ceEEEEeCCEEEEEeCCCCceEEEEcCCC--CCCEEccCC--------ceeeEEEcCCEEEEEECCCCcccccceeccCC
Confidence 34577899999999754 45899999998 788999875 2234789999999998754210 00 013
Q ss_pred eEEEEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccc
Q 004816 221 TEIVAIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 300 (729)
Q Consensus 221 ~~l~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~ 300 (729)
..||++++++++.++|+.... ..|+|+|++|+|+..... ....||+++++ +... .++... . .
T Consensus 88 ~~Iy~i~~dg~~~~~l~~~~~----~~~s~~g~~Iy~~~~~~~----~~~~Iy~~~~d-Gs~~--~~lt~~-~----~-- 149 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLDPDPC----IYASLIGNYIYYLHYDTQ----TATSLYRIRID-GEEK--KKIKNH-Y----L-- 149 (302)
T ss_dssp EEEEEEETTSCCCEEEECSCE----EEEEEETTEEEEEEESSS----SCEEEEEEETT-SCCC--EEEESS-C----C--
T ss_pred CeEEEEeCCCCcceEeecCCc----cEEEEeCCEEEEEeecCC----CCceEEEEECC-CCCe--EEEeCC-C----c--
Confidence 689999999998888886543 368999999999973222 34679999998 4332 334433 2 1
Q ss_pred cCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEE
Q 004816 301 TEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSY 379 (729)
Q Consensus 301 ~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ 379 (729)
+.++++|+ |+|+.. +..+|++++++++..++|..... ..|. .| +++.|||+...++ .+
T Consensus 150 --~~~~~~g~~iy~t~~---g~~~Iy~~~l~g~~~~~l~~~~~--~~~~-~P------------~g~~iy~t~~~~~-~~ 208 (302)
T 3s25_A 150 --FTCNTSDRYFYYNNP---KNGQLYRYDTASQSEALFYDCNC--YKPV-VL------------DDTNVYYMDVNRD-NA 208 (302)
T ss_dssp --CCSEEETTEEEEECT---TTCCEEEEETTTTEEEEEECSCE--EEEE-EE------------ETTEEEEEEGGGT-TE
T ss_pred --eEeeEECCEEEEEeC---CCceEEEEECCCCCEEEEeCCCc--ccee-ee------------cCCEEEEEEcCCC-cE
Confidence 34678898 888864 56789999999988888764321 1121 12 7889999876555 79
Q ss_pred EEEEECCCCceEeeccCCcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcceeee
Q 004816 380 LGILDDFGHSLSLLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 380 ly~~d~~~g~~~~lt~~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt 437 (729)
|++++++++..++|+... +..+.+.++.+++..... ...|+++++++...++|+
T Consensus 209 I~~~~ldG~~~~~Lt~~~--~~~~~~~g~~Iy~~~~~~--~~~i~~~~~DG~~r~~l~ 262 (302)
T 3s25_A 209 IVHVNINNPNPVVLTEAN--IEHYNVYGSLIFYQRGGD--NPALCVVKNDGTGFKELA 262 (302)
T ss_dssp EEEECSSSCCCEECSCSC--EEEEEEETTEEEEEECSS--SCEEEEEETTSCCCEEEE
T ss_pred EEEEECCCCCeEEEeCCC--cceEEECCCEEEEEECCC--CcEEEEEECCCCccEEee
Confidence 999999999999998643 344577788775543322 268999999998876665
No 184
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=1.2e-14 Score=169.52 Aligned_cols=265 Identities=10% Similarity=0.007 Sum_probs=173.7
Q ss_pred eEEEECCEEEEEECCC----CcEEEEeCC---CCCCCCeecCCCCC---CCceeeecceecCCCCEEEEEEeccCCCCCC
Q 004816 149 AFRIFGDTVIFSNYKD----QRLYKHSID---SKDSSPLPITPDYG---EPLVSYADGIFDPRFNRYVTVREDRRQDALN 218 (729)
Q Consensus 149 ~~~~~~~~i~~~~~~~----~~l~~~d~~---~~~~~~~~lt~~~~---~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~ 218 (729)
...++++.++|..... ..||+.+.. + ++.++|.+.+. .....+..++|||||++|+|..+..+.+
T Consensus 113 ~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e--- 187 (741)
T 1yr2_A 113 LPQRRGASVFYSWNSGLMNQSQLLVRPADAPVG--TKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSD--- 187 (741)
T ss_dssp CCEEETTEEEEEEECSSCSSCEEEEEETTSCTT--CCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCS---
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCccCC--CCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCc---
Confidence 4458899999887643 378999986 6 66777543210 0013567899999999999998765432
Q ss_pred cceEEEEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCC------CCCCcEEEEEEecCCCCeeeeEEecCC
Q 004816 219 STTEIVAIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNM------PWDKAELWVGYISENGDVYKRVCVAGF 292 (729)
Q Consensus 219 ~~~~l~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~------~~~~~~l~~~d~~~~g~~~~~~~~~~~ 292 (729)
..+|+++|+++|+....+........++|||| +.|+|.+.+.... .....+||++++. ++......+....
T Consensus 188 -~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lg-t~~~~~~lv~~~~ 264 (741)
T 1yr2_A 188 -WRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLG-TPQSADQPVFATP 264 (741)
T ss_dssp -EEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETT-SCGGGCEEEECCT
T ss_pred -eEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECC-CCchhCEEEeccC
Confidence 36899999999987665332222357999999 9999998554310 0014569999987 5543223344433
Q ss_pred CCCccccccCceeCCCCc-EEEEEecC-CCceEEEEEEcCCC--e-EEEeeccCccccCCcccccCcceeeeeecCCCCE
Q 004816 293 DPTIVESPTEPKWSSKGE-LFFVTDRK-NGFWNLHKWIESNN--E-VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNL 367 (729)
Q Consensus 293 ~~~~~~~~~~~~wspDG~-l~~~~~~~-~g~~~l~~~d~~~g--~-~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~ 367 (729)
+.. .....+.|||||+ |++.+.+. .+...||++|++++ + .+.|+........+ +. + +++.
T Consensus 265 ~~~--~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~---------~---dg~~ 329 (741)
T 1yr2_A 265 ELP--KRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VD---------G---VGDQ 329 (741)
T ss_dssp TCT--TCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EE---------E---ETTE
T ss_pred CCC--eEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-Ee---------c---cCCE
Confidence 211 2346789999999 88877652 14678999999887 5 67776433211111 11 2 7888
Q ss_pred EEEEEEECC-eEEEEEEECCCC--ceEeeccCCc-ceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcceeee
Q 004816 368 IACSYRQNG-RSYLGILDDFGH--SLSLLDIPFT-DIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 368 l~~~s~~~g-~~~ly~~d~~~g--~~~~lt~~~~-~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt 437 (729)
|++.++.++ ..+|++++++++ +++.|..... .+..+...++.+++... .+....||.++++++..++|+
T Consensus 330 l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~-~dg~~~l~~~~~~g~~~~~l~ 402 (741)
T 1yr2_A 330 LWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYI-HDAKSQVLAFDLDGKPAGAVS 402 (741)
T ss_dssp EEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEE-ETTEEEEEEEETTSCEEEECB
T ss_pred EEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEE-ECCEEEEEEEeCCCCceeecc
Confidence 998887654 678999999884 5666665433 35555444666665554 445567999998776555554
No 185
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.65 E-value=1.7e-15 Score=154.82 Aligned_cols=223 Identities=12% Similarity=0.066 Sum_probs=134.0
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCch
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGR 537 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~ 537 (729)
.+...+... +|.++++..+.+.+ +.|.||++||.+.+ ...|...+..|++ ||.|+++|+||.|.+..
T Consensus 5 ~~~~~~~~~-~g~~l~~~~~g~~~---------~~~~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~ 71 (285)
T 3bwx_A 5 YEDRYWTSS-DGLRLHFRAYEGDI---------SRPPVLCLPGLTRN--ARDFEDLATRLAG-DWRVLCPEMRGRGDSDY 71 (285)
T ss_dssp SEEEEEECT-TSCEEEEEEECBCT---------TSCCEEEECCTTCC--GGGGHHHHHHHBB-TBCEEEECCTTBTTSCC
T ss_pred cccCeeecC-CCceEEEEEcCCCC---------CCCcEEEECCCCcc--hhhHHHHHHHhhc-CCEEEeecCCCCCCCCC
Confidence 355566666 89999987775432 13569999998543 3556777788876 99999999998765432
Q ss_pred hHHHhhccCCCc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEecc--ccChhHHh--
Q 004816 538 EFRERLLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYG--VADLSMLR-- 611 (729)
Q Consensus 538 ~~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~--~~d~~~~~-- 611 (729)
.- ....+.. ...+|+.++++.+ +.+++.++||||||.+|+.++. +|++++++|+..+ ........
T Consensus 72 ~~---~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 142 (285)
T 3bwx_A 72 AK---DPMTYQPMQYLQDLEALLAQE------GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERI 142 (285)
T ss_dssp CS---SGGGCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHH
T ss_pred CC---CccccCHHHHHHHHHHHHHhc------CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHH
Confidence 10 0001110 1245666666655 2368999999999999999988 9999999998653 22111000
Q ss_pred ----hhc---chhh------hhhhhhhc-C-Chhh--------hh---------hcCc-----c-------------ccc
Q 004816 612 ----AET---HKFE------SRYIDNLV-G-SEKD--------YY---------EKSP-----I-------------NFV 641 (729)
Q Consensus 612 ----~~~---~~~~------~~~~~~~~-~-~~~~--------~~---------~~sp-----~-------------~~~ 641 (729)
... ..+. ........ . .... +. ..++ + ..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (285)
T 3bwx_A 143 RGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLF 222 (285)
T ss_dssp HHHTTCCCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHH
T ss_pred HHHhcCCcccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHH
Confidence 000 0000 00000000 0 0000 00 0000 0 011
Q ss_pred CCC-CCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 642 DKF-SCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 642 ~~i-~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
.++ ++|+|+++|++|..++++.+.++.+ . .++++++++++||.... +.... ++.+.+|+.+
T Consensus 223 ~~~~~~P~lii~G~~D~~~~~~~~~~~~~----~-~~~~~~~i~~~gH~~~~-e~p~~-~~~i~~fl~~ 284 (285)
T 3bwx_A 223 DALATRPLLVLRGETSDILSAQTAAKMAS----R-PGVELVTLPRIGHAPTL-DEPES-IAAIGRLLER 284 (285)
T ss_dssp HHHTTSCEEEEEETTCSSSCHHHHHHHHT----S-TTEEEEEETTCCSCCCS-CSHHH-HHHHHHHHTT
T ss_pred HHccCCCeEEEEeCCCCccCHHHHHHHHh----C-CCcEEEEeCCCCccchh-hCchH-HHHHHHHHHh
Confidence 223 7999999999999999877666544 3 46899999999997543 33333 4678888754
No 186
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.65 E-value=3.4e-15 Score=142.73 Aligned_cols=171 Identities=11% Similarity=0.042 Sum_probs=118.6
Q ss_pred CCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCC
Q 004816 491 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 570 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 570 (729)
+.|.||++||.+.+.. ..|......+...+| .++++|.+ ....+++.+.+..+++. .+
T Consensus 16 ~~~~vv~~HG~~~~~~-~~~~~~~~~~~~~~~---~v~~~~~~---------------~~~~~~~~~~~~~~~~~--~~- 73 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDD-EHWQSHWERRFPHWQ---RIRQREWY---------------QADLDRWVLAIRRELSV--CT- 73 (191)
T ss_dssp TTCEEEEECCTTCCCT-TSHHHHHHHHCTTSE---ECCCSCCS---------------SCCHHHHHHHHHHHHHT--CS-
T ss_pred CCceEEEECCCCCCch-hhHHHHHHHhcCCeE---EEeccCCC---------------CcCHHHHHHHHHHHHHh--cC-
Confidence 3578999999864432 233333333333444 45665421 12345555555555554 23
Q ss_pred CcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEE
Q 004816 571 KRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPII 649 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL 649 (729)
+++.++|||+||.+++.++. +|++++++|+.+|........ .+...+.++++|+|
T Consensus 74 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~------------------------~~~~~~~~~~~P~l 129 (191)
T 3bdv_A 74 QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFEI------------------------DDRIQASPLSVPTL 129 (191)
T ss_dssp SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGTC------------------------TTTSCSSCCSSCEE
T ss_pred CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccccC------------------------ccccccccCCCCEE
Confidence 79999999999999999998 899999999999976543110 00034567889999
Q ss_pred EEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCc--ccHHHHHHHHHHHHHHHhC
Q 004816 650 LFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKA--ENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 650 ~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~--~~~~~~~~~~~~fl~~~l~ 712 (729)
+++|++|.++|++.++++++.+ .+++++++++||.+... ....+.++.+.+|+++..+
T Consensus 130 ii~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~~~ 189 (191)
T 3bdv_A 130 TFASHNDPLMSFTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEILIP 189 (191)
T ss_dssp EEECSSBTTBCHHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTTCS
T ss_pred EEecCCCCcCCHHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHhcc
Confidence 9999999999999999998877 34899999999986432 1334555888888876533
No 187
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.65 E-value=7.2e-16 Score=161.31 Aligned_cols=198 Identities=16% Similarity=0.105 Sum_probs=124.5
Q ss_pred CEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCc
Q 004816 493 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 572 (729)
Q Consensus 493 P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 572 (729)
|+||++||.+... ..|...+..+ ||.|+++|+||.|..... .......+++.+.+..+++. ++.++
T Consensus 82 ~~vv~~hG~~~~~--~~~~~~~~~l---g~~Vi~~D~~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l~~~~ 147 (330)
T 3p2m_A 82 PRVIFLHGGGQNA--HTWDTVIVGL---GEPALAVDLPGHGHSAWR-------EDGNYSPQLNSETLAPVLRE--LAPGA 147 (330)
T ss_dssp CSEEEECCTTCCG--GGGHHHHHHS---CCCEEEECCTTSTTSCCC-------SSCBCCHHHHHHHHHHHHHH--SSTTC
T ss_pred CeEEEECCCCCcc--chHHHHHHHc---CCeEEEEcCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHH--hCCCC
Confidence 6799999985443 3354444444 999999999986543311 01122344554444444443 24568
Q ss_pred EEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhc-----------------chhh---hhhhhhhc-CChh
Q 004816 573 LCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAET-----------------HKFE---SRYIDNLV-GSEK 630 (729)
Q Consensus 573 i~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~-----------------~~~~---~~~~~~~~-~~~~ 630 (729)
+.|+|||+||.+++.++. +|++++++|+.++........... ..+. ........ ....
T Consensus 148 v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (330)
T 3p2m_A 148 EFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVK 227 (330)
T ss_dssp CEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHHHHCTTSCHH
T ss_pred cEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHHhcCCCCCHH
Confidence 999999999999999998 999999999998754321110000 0000 00000000 0000
Q ss_pred hhhh-----------------cC----------cccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEE-EEE
Q 004816 631 DYYE-----------------KS----------PINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVA-LVE 682 (729)
Q Consensus 631 ~~~~-----------------~s----------p~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~-~~~ 682 (729)
.+.. .. ....+.++++|+|+++|++|.++|++.+.++.+.+. ..+ +++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~----~~~~~~~ 303 (330)
T 3p2m_A 228 SLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRAT----HFRGVHI 303 (330)
T ss_dssp HHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHCS----SEEEEEE
T ss_pred HHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCeeEEE
Confidence 0000 00 012356789999999999999999999988887764 457 999
Q ss_pred ECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 683 YEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 683 ~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
++++||.+. .+...++.+.+.+||++
T Consensus 304 i~~~gH~~~-~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 304 VEKSGHSVQ-SDQPRALIEIVRGVLDT 329 (330)
T ss_dssp ETTCCSCHH-HHCHHHHHHHHHHHTTC
T ss_pred eCCCCCCcc-hhCHHHHHHHHHHHHhc
Confidence 999999753 34566777788888754
No 188
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.65 E-value=4.2e-15 Score=155.27 Aligned_cols=118 Identities=16% Similarity=0.106 Sum_probs=82.8
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++..+. ..|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+..... .....+
T Consensus 19 ~g~~l~y~~~G------------~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-~~~~~~ 83 (328)
T 2cjp_A 19 NGLNMHLAELG------------EGPTILFIHGFPEL--WYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPL-NDPSKF 83 (328)
T ss_dssp TTEEEEEEEEC------------SSSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCT-TCGGGG
T ss_pred CCcEEEEEEcC------------CCCEEEEECCCCCc--hHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCc-CCcccc
Confidence 78888865542 12689999998654 3456777888888999999999998766432200 000011
Q ss_pred Cc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccc
Q 004816 548 GI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGV 604 (729)
Q Consensus 548 ~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~ 604 (729)
.. ...+|+.+.++.+.. +.+++.|+||||||.+++.++. +|++++++|+.++.
T Consensus 84 ~~~~~a~dl~~~l~~l~~----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~ 138 (328)
T 2cjp_A 84 SILHLVGDVVALLEAIAP----NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVH 138 (328)
T ss_dssp SHHHHHHHHHHHHHHHCT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred cHHHHHHHHHHHHHHhcC----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccC
Confidence 11 125566666666521 2478999999999999999998 99999999998753
No 189
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.64 E-value=3.5e-15 Score=153.57 Aligned_cols=213 Identities=11% Similarity=0.080 Sum_probs=132.5
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCc
Q 004816 470 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI 549 (729)
Q Consensus 470 ~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~ 549 (729)
.++++....|. ...|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+...-. ...+..
T Consensus 33 ~~l~y~~~G~~---------~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~---~~~~~~ 98 (297)
T 2xt0_A 33 LRMHYVDEGPR---------DAEHTFLCLHGEPSW--SFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTD---DAVYTF 98 (297)
T ss_dssp CCEEEEEESCT---------TCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESC---GGGCCH
T ss_pred eEEEEEEccCC---------CCCCeEEEECCCCCc--ceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCC---cccCCH
Confidence 78886665431 113679999998544 3456777888999999999999998765432110 001111
Q ss_pred -ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChh--------HH---hhhcch
Q 004816 550 -VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLS--------ML---RAETHK 616 (729)
Q Consensus 550 -~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~--------~~---~~~~~~ 616 (729)
...+|+.+.++.+ +.+++.|+||||||.+++.++. +|++++++|+.++..... .+ ......
T Consensus 99 ~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (297)
T 2xt0_A 99 GFHRRSLLAFLDAL------QLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPD 172 (297)
T ss_dssp HHHHHHHHHHHHHH------TCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHh------CCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhcccc
Confidence 1144555555554 2368999999999999999998 999999999988743100 00 000000
Q ss_pred -------------hh----hhhhhhhcCCh------hhhhhc--------------CcccccC-CCCCCEEEEEeCCCCC
Q 004816 617 -------------FE----SRYIDNLVGSE------KDYYEK--------------SPINFVD-KFSCPIILFQGLEDKV 658 (729)
Q Consensus 617 -------------~~----~~~~~~~~~~~------~~~~~~--------------sp~~~~~-~i~~PvL~i~G~~D~~ 658 (729)
.. ..|.. .+... ..+... .....+. ++++|+|+++|++|..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~ 251 (297)
T 2xt0_A 173 LDVGKLMQRAIPGITDAEVAAYDA-PFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPV 251 (297)
T ss_dssp CCHHHHHHHHSTTCCHHHHHHHHT-TCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSS
T ss_pred cchhHHHhccCccCCHHHHHHHhc-cccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcc
Confidence 00 00000 00000 001000 0012345 8999999999999999
Q ss_pred CChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 659 VPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 659 vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
+| +.+.++.+.+... ....+.++++||.... ...++.+.+.+|+.
T Consensus 252 ~~-~~~~~~~~~~p~~--~~~~~~~~~~GH~~~~--~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 252 LG-PEVMGMLRQAIRG--CPEPMIVEAGGHFVQE--HGEPIARAALAAFG 296 (297)
T ss_dssp SS-HHHHHHHHHHSTT--CCCCEEETTCCSSGGG--GCHHHHHHHHHHTT
T ss_pred cC-hHHHHHHHhCCCC--eeEEeccCCCCcCccc--CHHHHHHHHHHHHh
Confidence 99 7888888877543 3344458999998653 56677888888874
No 190
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.64 E-value=5.8e-16 Score=163.70 Aligned_cols=209 Identities=15% Similarity=0.150 Sum_probs=130.5
Q ss_pred CCEEEEEcCCCCCCccc---cch-----------hhhHHHhhCCcEEEEecCCCCCCCchhHHHhh--ccCCC-cccHHH
Q 004816 492 PPLLVKSHGGPTSEARG---ILN-----------LSIQYWTSRGWAFVDVNYGGSTGYGREFRERL--LGRWG-IVDVND 554 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~---~~~-----------~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~--~~~~~-~~~~~D 554 (729)
.|+||++||.+++.... .|. ..++.|+++||.|+++|+||.|.......... ...+. ...++|
T Consensus 50 ~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~d 129 (354)
T 2rau_A 50 NDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISD 129 (354)
T ss_dssp EEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHHHH
T ss_pred CCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHHHH
Confidence 47899999986554311 222 57788999999999999998655432111000 00121 122678
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C-CCcceEEEEeccccCh---------------hHHhhhc---
Q 004816 555 CCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F-RDTFKAGASLYGVADL---------------SMLRAET--- 614 (729)
Q Consensus 555 ~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~-~~~~~a~v~~~~~~d~---------------~~~~~~~--- 614 (729)
+.++++++.++ .+.++++++|||+||.+++.++. + |++++++|+.++.... ..+....
T Consensus 130 ~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (354)
T 2rau_A 130 IKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYV 207 (354)
T ss_dssp HHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCCE
T ss_pred HHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhcccc
Confidence 88899998775 34579999999999999999988 7 9999999999653211 0000000
Q ss_pred -----c--------------------h--hhhhhhhh-h----cCCh------------------------hhhhhcCcc
Q 004816 615 -----H--------------------K--FESRYIDN-L----VGSE------------------------KDYYEKSPI 638 (729)
Q Consensus 615 -----~--------------------~--~~~~~~~~-~----~~~~------------------------~~~~~~sp~ 638 (729)
. . ....++.. . ..++ ..+...+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (354)
T 2rau_A 208 IPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLK 287 (354)
T ss_dssp EECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTTCC
T ss_pred cCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCcccc
Confidence 0 0 00000000 0 0000 000112223
Q ss_pred cccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCccc--CCcccHHHHHHHHHHHHHHH
Q 004816 639 NFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGF--RKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 639 ~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~--~~~~~~~~~~~~~~~fl~~~ 710 (729)
..+.++++|+|+++|++|.++|. .+. .+ ...+++++++++||.. ..++...++.+.+.+||.++
T Consensus 288 ~~l~~i~~P~Lii~G~~D~~~p~-~~~----~l---~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 288 FDYEGILVPTIAFVSERFGIQIF-DSK----IL---PSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp CCCTTCCCCEEEEEETTTHHHHB-CGG----GS---CTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred cccccCCCCEEEEecCCCCCCcc-chh----hh---ccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 44668999999999999987552 222 22 2356999999999975 24456678999999999875
No 191
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.64 E-value=1.8e-15 Score=156.88 Aligned_cols=214 Identities=14% Similarity=0.112 Sum_probs=134.4
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCc
Q 004816 470 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI 549 (729)
Q Consensus 470 ~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~ 549 (729)
.++++....|. ...|.||++||.+.+. ..|...+..|+++||.|+++|+||.|.+...- ....+..
T Consensus 34 ~~l~y~~~G~~---------~~g~~vvllHG~~~~~--~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~---~~~~y~~ 99 (310)
T 1b6g_A 34 LRAHYLDEGNS---------DAEDVFLCLHGEPTWS--YLYRKMIPVFAESGARVIAPDFFGFGKSDKPV---DEEDYTF 99 (310)
T ss_dssp CEEEEEEEECT---------TCSCEEEECCCTTCCG--GGGTTTHHHHHHTTCEEEEECCTTSTTSCEES---CGGGCCH
T ss_pred eEEEEEEeCCC---------CCCCEEEEECCCCCch--hhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC---CcCCcCH
Confidence 88887665431 1136799999986543 45667788899999999999999766543211 0011111
Q ss_pred -ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccC--hh----------------H
Q 004816 550 -VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVAD--LS----------------M 609 (729)
Q Consensus 550 -~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d--~~----------------~ 609 (729)
...+|+.+.++.| +.+++.|+||||||.+|+.++. +|++++++|+.++... .. .
T Consensus 100 ~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (310)
T 1b6g_A 100 EFHRNFLLALIERL------DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFT 173 (310)
T ss_dssp HHHHHHHHHHHHHH------TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHH
T ss_pred HHHHHHHHHHHHHc------CCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHH
Confidence 1144555555554 2368999999999999999998 9999999999887431 00 0
Q ss_pred Hhhh----cch-------------hh----hhhhhhhcCCh------hhhhh--cC-----------cccccC-CCCCCE
Q 004816 610 LRAE----THK-------------FE----SRYIDNLVGSE------KDYYE--KS-----------PINFVD-KFSCPI 648 (729)
Q Consensus 610 ~~~~----~~~-------------~~----~~~~~~~~~~~------~~~~~--~s-----------p~~~~~-~i~~Pv 648 (729)
.+.. ... +. ..|.. ..... ..+.. .. ....+. +|++|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~ 252 (310)
T 1b6g_A 174 AWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAA-PFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQT 252 (310)
T ss_dssp HHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHT-TCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEE
T ss_pred HHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhc-ccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCce
Confidence 0000 000 00 00000 00000 00000 00 012345 899999
Q ss_pred EEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 649 ILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 649 L~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
|+++|++|..+| +.+.++.+.+... ....++++++||.... ...++.+.+.+|+.+
T Consensus 253 Lvi~G~~D~~~~-~~~~~~~~~ip~~--~~~~i~~~~~GH~~~~--~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 253 FMAIGMKDKLLG-PDVMYPMKALING--CPEPLEIADAGHFVQE--FGEQVAREALKHFAE 308 (310)
T ss_dssp EEEEETTCSSSS-HHHHHHHHHHSTT--CCCCEEETTCCSCGGG--GHHHHHHHHHHHHHH
T ss_pred EEEeccCcchhh-hHHHHHHHhcccc--cceeeecCCcccchhh--ChHHHHHHHHHHHhc
Confidence 999999999999 8888888877643 2233334999997654 678888999999975
No 192
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.64 E-value=6.9e-16 Score=153.80 Aligned_cols=208 Identities=13% Similarity=0.064 Sum_probs=129.4
Q ss_pred CCCEEEEEcCCCCCCccc--cchhhhHHHhhCCcEEEEecCCCCCC-------Cchh-HH---Hh-hccCC----CcccH
Q 004816 491 KPPLLVKSHGGPTSEARG--ILNLSIQYWTSRGWAFVDVNYGGSTG-------YGRE-FR---ER-LLGRW----GIVDV 552 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~--~~~~~~~~la~~G~~v~~~d~rGs~g-------~g~~-~~---~~-~~~~~----~~~~~ 552 (729)
+.|.||++||...+.... ....+.+.|.+.||.|+.+|+++... ++.. +. .. ....| .....
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~~ 83 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISHE 83 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGGG
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcch
Confidence 468999999985443221 12245667777799999999983211 0000 00 00 00111 11234
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CC------CcceEEEEeccccChhHHhhhcchhhhhhhhhh
Q 004816 553 NDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FR------DTFKAGASLYGVADLSMLRAETHKFESRYIDNL 625 (729)
Q Consensus 553 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~------~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~ 625 (729)
.|+.+++++|.+....+..+++|+|||+||.+|+.++. ++ ..+++++..++......... .... ..
T Consensus 84 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~----~~~~---~~ 156 (243)
T 1ycd_A 84 LDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDPE----HPGE---LR 156 (243)
T ss_dssp CCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECTT----STTC---EE
T ss_pred hhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcccc----cccc---cc
Confidence 56777777776542233468999999999999999886 32 35788888887654311100 0000 00
Q ss_pred cCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCC---CCEEEEEECCCCcccCCcccHHHHHHH
Q 004816 626 VGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENG---LPVALVEYEGEQHGFRKAENIKFTLEQ 702 (729)
Q Consensus 626 ~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g---~~~~~~~~~~~gH~~~~~~~~~~~~~~ 702 (729)
+. ..+. ..+..+.++++|+|++||++|.++|++++.++++.++..+ .....++++++||.+... ....+.
T Consensus 157 ~~--~~~~--~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~---~~~~~~ 229 (243)
T 1ycd_A 157 IT--EKFR--DSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK---KDIIRP 229 (243)
T ss_dssp EC--GGGT--TTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC---HHHHHH
T ss_pred cc--hhHH--HhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch---HHHHHH
Confidence 00 0111 1122456688999999999999999999999999998641 112344566789987543 258889
Q ss_pred HHHHHHHHhC
Q 004816 703 QMVFFARVVG 712 (729)
Q Consensus 703 ~~~fl~~~l~ 712 (729)
+.+||+++++
T Consensus 230 i~~fl~~~~~ 239 (243)
T 1ycd_A 230 IVEQITSSLQ 239 (243)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhh
Confidence 9999999887
No 193
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.64 E-value=5.1e-15 Score=151.49 Aligned_cols=216 Identities=10% Similarity=0.008 Sum_probs=136.7
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++..+.+ .|+||++||.+.+. ..|...+..|++ +|.|+++|+||.|...... ....
T Consensus 16 ~g~~l~~~~~g~------------~~~vv~lHG~~~~~--~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~----~~~~ 76 (297)
T 2qvb_A 16 AGKRMAYIDEGK------------GDAIVFQHGNPTSS--YLWRNIMPHLEG-LGRLVACDLIGMGASDKLS----PSGP 76 (297)
T ss_dssp TTEEEEEEEESS------------SSEEEEECCTTCCG--GGGTTTGGGGTT-SSEEEEECCTTSTTSCCCS----SCST
T ss_pred CCEEEEEEecCC------------CCeEEEECCCCchH--HHHHHHHHHHhh-cCeEEEEcCCCCCCCCCCC----Cccc
Confidence 788888655521 37899999985543 446666777766 4999999999866543220 0011
Q ss_pred CcccHHHHHHHHHHHHhCCCCCC-CcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChh---H-------Hhhh--
Q 004816 548 GIVDVNDCCSCATFLVGSGKADE-KRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLS---M-------LRAE-- 613 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~-~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~---~-------~~~~-- 613 (729)
.....+++...+..+++. ++. +++.++|||+||.+++.++. +|++++++|+.++..... . ....
T Consensus 77 ~~~~~~~~~~~~~~~l~~--~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (297)
T 2qvb_A 77 DRYSYGEQRDFLFALWDA--LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFR 154 (297)
T ss_dssp TSSCHHHHHHHHHHHHHH--TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHT
T ss_pred cCcCHHHHHHHHHHHHHH--cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHh
Confidence 112344554444444443 234 78999999999999999988 999999999999865311 0 0000
Q ss_pred ----------cchhhhhhhhhhc-C--Ch---h------------------hhhh--------------cCcccccCCCC
Q 004816 614 ----------THKFESRYIDNLV-G--SE---K------------------DYYE--------------KSPINFVDKFS 645 (729)
Q Consensus 614 ----------~~~~~~~~~~~~~-~--~~---~------------------~~~~--------------~sp~~~~~~i~ 645 (729)
...+...+..... . .. + .+.. .+....+.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 234 (297)
T 2qvb_A 155 SPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETD 234 (297)
T ss_dssp STTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCC
T ss_pred cccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhccccc
Confidence 0000000000000 0 00 0 0000 01123456789
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 646 CPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 646 ~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
+|+|+++|++|.++|++.++++.+.+. . +++++ ++||.+. .+...++.+.+.+|++++.
T Consensus 235 ~P~lii~G~~D~~~~~~~~~~~~~~~~----~-~~~~~-~~gH~~~-~~~p~~~~~~i~~fl~~~~ 293 (297)
T 2qvb_A 235 MPKLFINAEPGAIITGRIRDYVRSWPN----Q-TEITV-PGVHFVQ-EDSPEEIGAAIAQFVRRLR 293 (297)
T ss_dssp SCEEEEEEEECSSSCHHHHHHHHTSSS----E-EEEEE-EESSCGG-GTCHHHHHHHHHHHHHHHH
T ss_pred ccEEEEecCCCCcCCHHHHHHHHHHcC----C-eEEEe-cCccchh-hhCHHHHHHHHHHHHHHHh
Confidence 999999999999999988777765543 3 88888 9999754 3567788899999998864
No 194
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.64 E-value=5e-15 Score=149.61 Aligned_cols=204 Identities=14% Similarity=0.095 Sum_probs=124.5
Q ss_pred CCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCC
Q 004816 490 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKAD 569 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 569 (729)
+..|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+..... . ...++++.+.+..+++.-. .
T Consensus 8 ~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~----~---~~~~~~~a~dl~~~l~~l~-~ 77 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLG--AWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLD----E---IHTFRDYSEPLMEVMASIP-P 77 (264)
T ss_dssp -CCCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG----G---CCSHHHHHHHHHHHHHHSC-T
T ss_pred CCCCeEEEECCCccc--cchHHHHHHHHHhCCCEEEEeecCCCCCCCCCcc----c---ccCHHHHHHHHHHHHHHhC-C
Confidence 345789999998543 3456778888988999999999998765432110 0 1123444333333333211 1
Q ss_pred CCcEEEEEcChHHHHHHHHHh-CCCcceEEEEecccc-Ch----h----HHhhhcc--h--------------------h
Q 004816 570 EKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVA-DL----S----MLRAETH--K--------------------F 617 (729)
Q Consensus 570 ~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~-d~----~----~~~~~~~--~--------------------~ 617 (729)
.+++.|+||||||.+++.++. +|++++++|+.++.. .. . .+..... . .
T Consensus 78 ~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
T 2wfl_A 78 DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMIL 157 (264)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEEC
T ss_pred CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhh
Confidence 368999999999999999987 999999999987632 10 0 1100000 0 0
Q ss_pred hhhhhhhhc-C--Chhh--hh-h-cCc-------------ccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCC
Q 004816 618 ESRYIDNLV-G--SEKD--YY-E-KSP-------------INFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLP 677 (729)
Q Consensus 618 ~~~~~~~~~-~--~~~~--~~-~-~sp-------------~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~ 677 (729)
...+..... . ..+. +. . ..+ +......++|+|+++|++|..+|++.++++.+.+. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p----~ 233 (264)
T 2wfl_A 158 GPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVG----A 233 (264)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHHC----C
T ss_pred hHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhCC----C
Confidence 000000000 0 0000 00 0 000 00001135899999999999999999988888775 3
Q ss_pred EEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 678 VALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 678 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
.++++++++||... .+...++.+.+.+|+.
T Consensus 234 ~~~~~i~~~gH~~~-~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 234 DKVKEIKEADHMGM-LSQPREVCKCLLDISD 263 (264)
T ss_dssp SEEEEETTCCSCHH-HHSHHHHHHHHHHHHC
T ss_pred ceEEEeCCCCCchh-hcCHHHHHHHHHHHhh
Confidence 48999999999743 3556677777778764
No 195
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.64 E-value=1.8e-15 Score=152.03 Aligned_cols=199 Identities=13% Similarity=0.074 Sum_probs=125.8
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCc-ccHHHHHHHHHHHHhCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI-VDVNDCCSCATFLVGSGKADE 570 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~d~ 570 (729)
.|.||++||.+.+. ..|...+..|++. |.|+++|+||.|.+.... .+.. ...+|+.+.++.+ +.
T Consensus 16 ~~~vvllHG~~~~~--~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~------~~~~~~~a~dl~~~l~~l------~~ 80 (255)
T 3bf7_A 16 NSPIVLVHGLFGSL--DNLGVLARDLVND-HNIIQVDVRNHGLSPREP------VMNYPAMAQDLVDTLDAL------QI 80 (255)
T ss_dssp CCCEEEECCTTCCT--TTTHHHHHHHTTT-SCEEEECCTTSTTSCCCS------CCCHHHHHHHHHHHHHHH------TC
T ss_pred CCCEEEEcCCcccH--hHHHHHHHHHHhh-CcEEEecCCCCCCCCCCC------CcCHHHHHHHHHHHHHHc------CC
Confidence 46799999985443 4567777888766 999999999866543210 1110 1145555555554 23
Q ss_pred CcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccc--c-C---hhHHhhhcc-----hh-----hhhhhhhhcCC-----
Q 004816 571 KRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGV--A-D---LSMLRAETH-----KF-----ESRYIDNLVGS----- 628 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~--~-d---~~~~~~~~~-----~~-----~~~~~~~~~~~----- 628 (729)
+++.++||||||.+++.++. +|++++++|+..+. . . ......... .. ...++.....+
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T 3bf7_A 81 DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ 160 (255)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHHH
T ss_pred CCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHHH
Confidence 68999999999999999988 99999999987532 1 1 111000000 00 00000000000
Q ss_pred --------------hhh----hhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCccc
Q 004816 629 --------------EKD----YYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGF 690 (729)
Q Consensus 629 --------------~~~----~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~ 690 (729)
... +........+.++++|+|+++|++|..++++.++++.+.+. .+++++++++||..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~ 236 (255)
T 3bf7_A 161 FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFP----QARAHVIAGAGHWV 236 (255)
T ss_dssp HHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCT----TEEECCBTTCCSCH
T ss_pred HHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHCC----CCeEEEeCCCCCcc
Confidence 000 00000001245789999999999999999988877766653 57999999999975
Q ss_pred CCcccHHHHHHHHHHHHHHH
Q 004816 691 RKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 691 ~~~~~~~~~~~~~~~fl~~~ 710 (729)
.. +....+.+.+.+|+.+|
T Consensus 237 ~~-e~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 237 HA-EKPDAVLRAIRRYLNDH 255 (255)
T ss_dssp HH-HCHHHHHHHHHHHHHTC
T ss_pred cc-CCHHHHHHHHHHHHhcC
Confidence 33 45577888889998754
No 196
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.64 E-value=2.2e-15 Score=153.15 Aligned_cols=225 Identities=13% Similarity=0.128 Sum_probs=138.2
Q ss_pred CCCcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhh-CCcEEEEecCCCCC
Q 004816 455 FSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGST 533 (729)
Q Consensus 455 ~~~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~-~G~~v~~~d~rGs~ 533 (729)
+.+.+.+++.+...+..+.++++.|++.. +.+++|+|+++||+.... .......+.+++ .+..|+.+++++..
T Consensus 10 ~~~~~~~~~~S~~~~~~~~~~vylP~~y~----~~~~yPvly~l~G~~~~~--~~~~~~~~~l~~~~~~ivV~v~~~~~~ 83 (278)
T 2gzs_A 10 FYHFSATSFDSVDGTRHYRVWTAVPNTTA----PASGYPILYMLDGNAVMD--RLDDELLKQLSEKTPPVIVAVGYQTNL 83 (278)
T ss_dssp SEEEEEEEEECTTSSCEEEEEEEEESSCC----CTTCEEEEEESSHHHHHH--HCCHHHHHHHTTSCCCEEEEEEESSSS
T ss_pred CCceEEEEEEcCCCCceEEEEEECCCCCC----CCCCCCEEEEeeChhHHH--HHHHHHHHHhccCCCeEEEEEcCCCCC
Confidence 44567788887634778999999998733 256789887777753211 111223455555 67888889987532
Q ss_pred CCc-----hhHHHhh------------ccCCCcccHHHHHH-----HHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHhC
Q 004816 534 GYG-----REFRERL------------LGRWGIVDVNDCCS-----CATFLVGSGKADEKRLCITGGSAGGYTTLAALAF 591 (729)
Q Consensus 534 g~g-----~~~~~~~------------~~~~~~~~~~D~~~-----~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 591 (729)
.+. .++.... ....+ ...++.. ++.++.++..+|++|++|+|+||||++|+.++..
T Consensus 84 ~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~ 161 (278)
T 2gzs_A 84 PFDLNSRAYDYTPAAESRKTDLHSGRFSRKSG--GSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS 161 (278)
T ss_dssp SCCHHHHHHHTCCGGGGTTCSCC-----CCCC--CHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred cCcccccccccCCCCccccccccccCcCCCcC--CHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC
Confidence 211 1111110 00011 1222222 2334445566788899999999999999988755
Q ss_pred CCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCC--------ChHH
Q 004816 592 RDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVV--------PPDQ 663 (729)
Q Consensus 592 ~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~v--------p~~~ 663 (729)
|+.|+++++.+|...+..... ..+.. ...+ . ..-..|+++.+|+.|..+ +..+
T Consensus 162 p~~f~~~~~~s~~~~~~~~~~------~~~~~----------~~~~--~-~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~ 222 (278)
T 2gzs_A 162 SSYFRSYYSASPSLGRGYDAL------LSRVT----------AVEP--L-QFCTKHLAIMEGSATQGDNRETHAVGVLSK 222 (278)
T ss_dssp CSSCSEEEEESGGGSTTHHHH------HHHHH----------TSCT--T-TTTTCEEEEEECCC-----------CHHHH
T ss_pred ccccCeEEEeCcchhcCcchH------HHHHH----------Hhhc--c-CCCCCcEEEEecCccccccccchhhhhHHH
Confidence 999999999999754431100 00000 0000 0 112458999999999864 4789
Q ss_pred HHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 664 ARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 664 ~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
+++++++|+++|+++++.++||++|++.. ...+...++||.++
T Consensus 223 ~~~~~~~L~~~g~~~~~~~~~g~~H~~~~----~~~~~~~l~fl~~~ 265 (278)
T 2gzs_A 223 IHTTLTILKDKGVNAVFWDFPNLGHGPMF----NASFRQALLDISGE 265 (278)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTCCHHHHH----HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCeeEEEEcCCCCccchh----HHHHHHHHHHHhhC
Confidence 99999999999999999999999997532 12233455566543
No 197
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.64 E-value=3.3e-15 Score=150.66 Aligned_cols=205 Identities=14% Similarity=0.072 Sum_probs=126.9
Q ss_pred CCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCC
Q 004816 489 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKA 568 (729)
Q Consensus 489 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 568 (729)
....|+||++||.+. ....|...+..|++. |.|+++|+||.|. +... ......+++...+..+++..
T Consensus 17 ~~~~~~vv~~HG~~~--~~~~~~~~~~~l~~~-~~v~~~d~~G~G~---s~~~-----~~~~~~~~~~~~~~~~l~~~-- 83 (267)
T 3fla_A 17 PDARARLVCLPHAGG--SASFFFPLAKALAPA-VEVLAVQYPGRQD---RRHE-----PPVDSIGGLTNRLLEVLRPF-- 83 (267)
T ss_dssp TTCSEEEEEECCTTC--CGGGGHHHHHHHTTT-EEEEEECCTTSGG---GTTS-----CCCCSHHHHHHHHHHHTGGG--
T ss_pred CCCCceEEEeCCCCC--CchhHHHHHHHhccC-cEEEEecCCCCCC---CCCC-----CCCcCHHHHHHHHHHHHHhc--
Confidence 345689999999844 345667777777665 9999999996543 2111 11123555555555444442
Q ss_pred CCCcEEEEEcChHHHHHHHHHh-CCCc----ceEEEEeccccChh------------HHhhhcch---hhhhhh------
Q 004816 569 DEKRLCITGGSAGGYTTLAALA-FRDT----FKAGASLYGVADLS------------MLRAETHK---FESRYI------ 622 (729)
Q Consensus 569 d~~ri~i~G~S~GG~~a~~~~~-~~~~----~~a~v~~~~~~d~~------------~~~~~~~~---~~~~~~------ 622 (729)
+.+++.|+|||+||.+++.++. +|++ ++++++..+..... .+...... ......
T Consensus 84 ~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (267)
T 3fla_A 84 GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPELL 163 (267)
T ss_dssp TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHHH
T ss_pred CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHHH
Confidence 4578999999999999999998 8876 88888887653211 00000000 000000
Q ss_pred ----hhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHH
Q 004816 623 ----DNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKF 698 (729)
Q Consensus 623 ----~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~ 698 (729)
.....+........+.. ..++++|+|+++|++|..+|++.+.++.+.+.. +++++++++ ||.+.. ++..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~g-gH~~~~-~~~~~ 237 (267)
T 3fla_A 164 AMVLPAIRSDYRAVETYRHEP-GRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTG---PADLRVLPG-GHFFLV-DQAAP 237 (267)
T ss_dssp HHHHHHHHHHHHHHHHCCCCT-TCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSS---CEEEEEESS-STTHHH-HTHHH
T ss_pred HHHHHHHHHHHHhhhcccccc-cCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC---CceEEEecC-Cceeec-cCHHH
Confidence 00000001111111111 157889999999999999999888877666542 589999998 997543 45667
Q ss_pred HHHHHHHHHHHHhC
Q 004816 699 TLEQQMVFFARVVG 712 (729)
Q Consensus 699 ~~~~~~~fl~~~l~ 712 (729)
+.+.+.+|+.+...
T Consensus 238 ~~~~i~~fl~~~~~ 251 (267)
T 3fla_A 238 MIATMTEKLAGPAL 251 (267)
T ss_dssp HHHHHHHHTC----
T ss_pred HHHHHHHHhccccc
Confidence 77888888877654
No 198
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.64 E-value=6.1e-15 Score=149.80 Aligned_cols=206 Identities=13% Similarity=0.058 Sum_probs=129.6
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
.|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+.... . ....++++.+.+..+++.-. ..+
T Consensus 4 ~~~vvllHG~~~~--~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~----~---~~~~~~~~a~dl~~~l~~l~-~~~ 73 (273)
T 1xkl_A 4 GKHFVLVHGACHG--GWSWYKLKPLLEAAGHKVTALDLAASGTDLRKI----E---ELRTLYDYTLPLMELMESLS-ADE 73 (273)
T ss_dssp CCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCG----G---GCCSHHHHHHHHHHHHHTSC-SSS
T ss_pred CCeEEEECCCCCC--cchHHHHHHHHHhCCCEEEEecCCCCCCCccCc----c---cccCHHHHHHHHHHHHHHhc-cCC
Confidence 3679999998543 345677788898899999999999876543211 0 01234555444444444421 136
Q ss_pred cEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccC-----h----hHHhhhcch--h--------------------hh
Q 004816 572 RLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVAD-----L----SMLRAETHK--F--------------------ES 619 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d-----~----~~~~~~~~~--~--------------------~~ 619 (729)
++.|+||||||.+++.++. +|++++++|+.++... . ..+...... + ..
T Consensus 74 ~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T 1xkl_A 74 KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGP 153 (273)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCH
T ss_pred CEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCH
Confidence 8999999999999999987 9999999999886421 0 011000000 0 00
Q ss_pred hhhhhhc-C--Chh--hhh----hc-----------CcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEE
Q 004816 620 RYIDNLV-G--SEK--DYY----EK-----------SPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVA 679 (729)
Q Consensus 620 ~~~~~~~-~--~~~--~~~----~~-----------sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 679 (729)
.+..... . ..+ .+. .. ..+......++|+|+++|++|..+|++.++++.+.+. ..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p----~~~ 229 (273)
T 1xkl_A 154 KFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIG----VTE 229 (273)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHC----CSE
T ss_pred HHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCC----CCe
Confidence 0000000 0 000 000 00 0000001136899999999999999999988888775 348
Q ss_pred EEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 680 LVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 680 ~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
++++|++||... .+...++.+.+.+|+.+...
T Consensus 230 ~~~i~~aGH~~~-~e~P~~~~~~i~~fl~~~~~ 261 (273)
T 1xkl_A 230 AIEIKGADHMAM-LCEPQKLCASLLEIAHKYNM 261 (273)
T ss_dssp EEEETTCCSCHH-HHSHHHHHHHHHHHHHHCC-
T ss_pred EEEeCCCCCCch-hcCHHHHHHHHHHHHHHhcc
Confidence 999999999753 35567888899999988654
No 199
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.63 E-value=6.6e-15 Score=151.17 Aligned_cols=212 Identities=12% Similarity=-0.001 Sum_probs=131.2
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|..+++..+. ..|+||++||.+.+. ..|...+..|+++ |.|+++|+||.|..... .
T Consensus 18 ~g~~l~~~~~g------------~~~~vv~lHG~~~~~--~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~-----~--- 74 (301)
T 3kda_A 18 DGVKLHYVKGG------------QGPLVMLVHGFGQTW--YEWHQLMPELAKR-FTVIAPDLPGLGQSEPP-----K--- 74 (301)
T ss_dssp TTEEEEEEEEE------------SSSEEEEECCTTCCG--GGGTTTHHHHTTT-SEEEEECCTTSTTCCCC-----S---
T ss_pred CCeEEEEEEcC------------CCCEEEEECCCCcch--hHHHHHHHHHHhc-CeEEEEcCCCCCCCCCC-----C---
Confidence 79998866653 236899999985443 5567778888888 99999999987654432 1
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCc-EEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhh-------------
Q 004816 548 GIVDVNDCCSCATFLVGSGKADEKR-LCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRA------------- 612 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~------------- 612 (729)
.....+++...+..+++.- +.++ +.++|||+||.+++.++. +|++++++|+.++.........
T Consensus 75 ~~~~~~~~~~~l~~~l~~l--~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (301)
T 3kda_A 75 TGYSGEQVAVYLHKLARQF--SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVW 152 (301)
T ss_dssp SCSSHHHHHHHHHHHHHHH--CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSST
T ss_pred CCccHHHHHHHHHHHHHHc--CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhh
Confidence 1123344444444333331 3356 999999999999999998 9999999999998531100000
Q ss_pred -----hc-c------------hhhhhhhhhhcC-----Chh---h-----------------hh--------hcCccccc
Q 004816 613 -----ET-H------------KFESRYIDNLVG-----SEK---D-----------------YY--------EKSPINFV 641 (729)
Q Consensus 613 -----~~-~------------~~~~~~~~~~~~-----~~~---~-----------------~~--------~~sp~~~~ 641 (729)
.. . .+...+...... ..+ . +. .......+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (301)
T 3kda_A 153 HFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTR 232 (301)
T ss_dssp HHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSC
T ss_pred hHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhc
Confidence 00 0 000000100000 000 0 00 00001123
Q ss_pred CCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 642 DKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 642 ~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
+++++|+|+++|++| +++.....+.+ .-.++++++++++||.+. .+...++.+.+.+|+++.-
T Consensus 233 ~~i~~P~l~i~G~~D--~~~~~~~~~~~----~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~~l~~~~ 295 (301)
T 3kda_A 233 LQMPTMTLAGGGAGG--MGTFQLEQMKA----YAEDVEGHVLPGCGHWLP-EECAAPMNRLVIDFLSRGR 295 (301)
T ss_dssp BCSCEEEEEECSTTS--CTTHHHHHHHT----TBSSEEEEEETTCCSCHH-HHTHHHHHHHHHHHHTTSC
T ss_pred cccCcceEEEecCCC--CChhHHHHHHh----hcccCeEEEcCCCCcCch-hhCHHHHHHHHHHHHhhCc
Confidence 388999999999999 66665555543 334689999999999753 3556677777777776643
No 200
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.63 E-value=9.1e-15 Score=150.22 Aligned_cols=218 Identities=11% Similarity=0.021 Sum_probs=139.1
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++.+..+.+ .|+||++||.+.+. ..|...+..|+++ |.|+++|+||.|...... ....
T Consensus 17 ~g~~l~~~~~g~------------~~~vv~lHG~~~~~--~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~----~~~~ 77 (302)
T 1mj5_A 17 KGRRMAYIDEGT------------GDPILFQHGNPTSS--YLWRNIMPHCAGL-GRLIACDLIGMGDSDKLD----PSGP 77 (302)
T ss_dssp TTEEEEEEEESC------------SSEEEEECCTTCCG--GGGTTTGGGGTTS-SEEEEECCTTSTTSCCCS----SCST
T ss_pred CCEEEEEEEcCC------------CCEEEEECCCCCch--hhhHHHHHHhccC-CeEEEEcCCCCCCCCCCC----CCCc
Confidence 788888655421 37899999985543 4456667777665 899999999866543220 0011
Q ss_pred CcccHHHHHHHHHHHHhCCCCCC-CcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccCh---hH-------Hhhh--
Q 004816 548 GIVDVNDCCSCATFLVGSGKADE-KRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADL---SM-------LRAE-- 613 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~-~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~---~~-------~~~~-- 613 (729)
.....+++.+.+..+++. ++. +++.++|||+||.+++.++. +|++++++|+.+|.... .. ....
T Consensus 78 ~~~~~~~~~~~~~~~l~~--l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (302)
T 1mj5_A 78 ERYAYAEHRDYLDALWEA--LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFR 155 (302)
T ss_dssp TSSCHHHHHHHHHHHHHH--TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHH--hCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHh
Confidence 113455555555555444 234 78999999999999999998 99999999999986531 10 0000
Q ss_pred ----------cchhhhhhhhhhc-C--Chh---h------------------hhh--------------cCcccccCCCC
Q 004816 614 ----------THKFESRYIDNLV-G--SEK---D------------------YYE--------------KSPINFVDKFS 645 (729)
Q Consensus 614 ----------~~~~~~~~~~~~~-~--~~~---~------------------~~~--------------~sp~~~~~~i~ 645 (729)
...+...+..... . ..+ . +.. .+....+.+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 235 (302)
T 1mj5_A 156 SQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESP 235 (302)
T ss_dssp STTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCC
T ss_pred ccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccC
Confidence 0000000000000 0 000 0 000 01123456789
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhCC
Q 004816 646 CPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVGH 713 (729)
Q Consensus 646 ~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~ 713 (729)
+|+|+++|++|.++|++.++++.+.+. . +++++ ++||.+. .+...++.+.+.+|+.+....
T Consensus 236 ~P~l~i~g~~D~~~~~~~~~~~~~~~~----~-~~~~~-~~gH~~~-~e~p~~~~~~i~~fl~~~~~~ 296 (302)
T 1mj5_A 236 IPKLFINAEPGALTTGRMRDFCRTWPN----Q-TEITV-AGAHFIQ-EDSPDEIGAAIAAFVRRLRPA 296 (302)
T ss_dssp SCEEEEEEEECSSSSHHHHHHHTTCSS----E-EEEEE-EESSCGG-GTCHHHHHHHHHHHHHHHSCC
T ss_pred CCeEEEEeCCCCCCChHHHHHHHHhcC----C-ceEEe-cCcCccc-ccCHHHHHHHHHHHHHhhccc
Confidence 999999999999999987777665543 3 88889 9999754 356778899999999987763
No 201
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.63 E-value=1.5e-13 Score=144.43 Aligned_cols=283 Identities=12% Similarity=0.044 Sum_probs=164.7
Q ss_pred CccCceEEcC-CCcEEEEeecCCC-CCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCc
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTE-AGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQR 166 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~-~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 166 (729)
..+.++.++| ++.+|........ .....++.++..+ ++....++.+ .......++++++.+++....++.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~-------~~~~~~~~s~dg~~l~v~~~~~~~ 112 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVT-LEVTQAIHND-------LKPFGATINNTTQTLWFGNTVNSA 112 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTT-CCEEEEEEES-------SCCCSEEEETTTTEEEEEETTTTE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCC-CeEEEEEecC-------CCcceEEECCCCCEEEEEecCCCE
Confidence 4566889999 7888776642210 0123466666652 2333222211 011233455556678888777789
Q ss_pred EEEEeCCCCCCCC-eecCCCCCC-----CceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee-C
Q 004816 167 LYKHSIDSKDSSP-LPITPDYGE-----PLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS-G 239 (729)
Q Consensus 167 l~~~d~~~~~~~~-~~lt~~~~~-----~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~-~ 239 (729)
|+++|+++ ++. ..+...... .......+.|||||+++++..... ...|+++|+++++...... .
T Consensus 113 v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------~~~i~~~d~~~~~~~~~~~~~ 183 (353)
T 3vgz_A 113 VTAIDAKT--GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-------ESVIWVVDGGNIKLKTAIQNT 183 (353)
T ss_dssp EEEEETTT--CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-------SCEEEEEETTTTEEEEEECCC
T ss_pred EEEEeCCC--CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-------CceEEEEcCCCCceEEEecCC
Confidence 99999987 554 333322100 011246688999999876665322 2579999999887765544 3
Q ss_pred CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCC
Q 004816 240 SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKN 319 (729)
Q Consensus 240 ~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~ 319 (729)
.......+|||||++|++... ...|+++|+. +++............. .....+.|+|||+.+|....
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~--------~~~i~~~d~~-~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~-- 250 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNA--------DGELITIDTA-DNKILSRKKLLDDGKE--HFFINISLDTARQRAFITDS-- 250 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECT--------TSEEEEEETT-TTEEEEEEECCCSSSC--CCEEEEEEETTTTEEEEEES--
T ss_pred CCccceEEECCCCCEEEEEcC--------CCeEEEEECC-CCeEEEEEEcCCCCCC--cccceEEECCCCCEEEEEeC--
Confidence 333567899999999877642 3469999988 6765322222111101 23445789999994455544
Q ss_pred CceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccCCcc
Q 004816 320 GFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTD 399 (729)
Q Consensus 320 g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~~~~ 399 (729)
+...|+++|+.+++......... + ..+.|.+ +++.+|++...++ .|+++|.++++..........
T Consensus 251 ~~~~v~~~d~~~~~~~~~~~~~~----~------~~~~~s~---dg~~l~v~~~~~~--~v~~~d~~~~~~~~~~~~~~~ 315 (353)
T 3vgz_A 251 KAAEVLVVDTRNGNILAKVAAPE----S------LAVLFNP---ARNEAYVTHRQAG--KVSVIDAKSYKVVKTFDTPTH 315 (353)
T ss_dssp SSSEEEEEETTTCCEEEEEECSS----C------CCEEEET---TTTEEEEEETTTT--EEEEEETTTTEEEEEEECCSE
T ss_pred CCCEEEEEECCCCcEEEEEEcCC----C------ceEEECC---CCCEEEEEECCCC--eEEEEECCCCeEEEEEecCCC
Confidence 34678899998887655443211 1 1234443 6777776654444 577779888776543332233
Q ss_pred eEEe--eeeCCEEEEEEeC
Q 004816 400 IDNI--TLGNDCLFVEGAS 416 (729)
Q Consensus 400 v~~~--~~~~~~~~~~~~~ 416 (729)
...+ +++++.+++....
T Consensus 316 ~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 316 PNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEECTTSCEEEEEEEC
T ss_pred CCeEEEcCCCCEEEEEEcc
Confidence 4444 3444445554443
No 202
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.62 E-value=4.6e-15 Score=150.16 Aligned_cols=200 Identities=11% Similarity=0.071 Sum_probs=126.7
Q ss_pred CEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCc
Q 004816 493 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 572 (729)
Q Consensus 493 P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 572 (729)
|.||++||.+.+. ..|...+..|++. |.|+++|+||.|.+.... .. ....+++...+..+++. .+.++
T Consensus 17 ~~vvllHG~~~~~--~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~-----~~--~~~~~~~~~dl~~~l~~--l~~~~ 84 (269)
T 2xmz_A 17 QVLVFLHGFLSDS--RTYHNHIEKFTDN-YHVITIDLPGHGEDQSSM-----DE--TWNFDYITTLLDRILDK--YKDKS 84 (269)
T ss_dssp EEEEEECCTTCCG--GGGTTTHHHHHTT-SEEEEECCTTSTTCCCCT-----TS--CCCHHHHHHHHHHHHGG--GTTSE
T ss_pred CeEEEEcCCCCcH--HHHHHHHHHHhhc-CeEEEecCCCCCCCCCCC-----CC--ccCHHHHHHHHHHHHHH--cCCCc
Confidence 4599999985543 4456677778765 999999999876543211 00 12345555555444444 23468
Q ss_pred EEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHH-------h------h-----hcchhhhh------hhh----
Q 004816 573 LCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSML-------R------A-----ETHKFESR------YID---- 623 (729)
Q Consensus 573 i~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~-------~------~-----~~~~~~~~------~~~---- 623 (729)
+.++||||||.+|+.++. +|++++++|+.++....... . . ....+... +..
T Consensus 85 ~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (269)
T 2xmz_A 85 ITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLEL 164 (269)
T ss_dssp EEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSGGGGGGGGS
T ss_pred EEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhCccccccccC
Confidence 999999999999999998 99999999999875432100 0 0 00000000 000
Q ss_pred ------hh-----cCChhh----hhh------cCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEE
Q 004816 624 ------NL-----VGSEKD----YYE------KSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVE 682 (729)
Q Consensus 624 ------~~-----~~~~~~----~~~------~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 682 (729)
.. ...... +.. .+....+.++++|+|+++|++|..+|++... +.+.+ ..+++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~----~~~~~~~ 239 (269)
T 2xmz_A 165 PVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLI----PNSKCKL 239 (269)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHS----TTEEEEE
T ss_pred CHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhC----CCcEEEE
Confidence 00 000000 000 1112346778999999999999988876543 54443 3579999
Q ss_pred ECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 683 YEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 683 ~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
++++||.... +...++.+.+.+|+.+.
T Consensus 240 i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 240 ISATGHTIHV-EDSDEFDTMILGFLKEE 266 (269)
T ss_dssp ETTCCSCHHH-HSHHHHHHHHHHHHHHH
T ss_pred eCCCCCChhh-cCHHHHHHHHHHHHHHh
Confidence 9999997643 45678888899999865
No 203
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.61 E-value=7.2e-15 Score=147.81 Aligned_cols=202 Identities=14% Similarity=0.060 Sum_probs=126.6
Q ss_pred CEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCc
Q 004816 493 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 572 (729)
Q Consensus 493 P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 572 (729)
|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+.... .. ...++++.+.+..+++.-. ..++
T Consensus 4 ~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~----~~---~~~~~~~a~dl~~~l~~l~-~~~~ 73 (257)
T 3c6x_A 4 AHFVLIHTICHG--AWIWHKLKPLLEALGHKVTALDLAASGVDPRQI----EE---IGSFDEYSEPLLTFLEALP-PGEK 73 (257)
T ss_dssp CEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCG----GG---CCSHHHHTHHHHHHHHTSC-TTCC
T ss_pred CcEEEEcCCccC--cCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCc----cc---ccCHHHHHHHHHHHHHhcc-ccCC
Confidence 579999998533 445777888999999999999999876543211 00 1224444444444444321 1368
Q ss_pred EEEEEcChHHHHHHHHHh-CCCcceEEEEecccc-C----hh----HHhhhcch--------------------hhhhhh
Q 004816 573 LCITGGSAGGYTTLAALA-FRDTFKAGASLYGVA-D----LS----MLRAETHK--------------------FESRYI 622 (729)
Q Consensus 573 i~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~-d----~~----~~~~~~~~--------------------~~~~~~ 622 (729)
+.|+||||||.+++.++. +|++++++|+.++.. . .. .+...... ....+.
T Consensus 74 ~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (257)
T 3c6x_A 74 VILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLL 153 (257)
T ss_dssp EEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHH
T ss_pred eEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHHH
Confidence 999999999999999998 999999999987642 1 00 01000000 000000
Q ss_pred hhhc-C--Chh--hhh-h-cCc-------------ccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEE
Q 004816 623 DNLV-G--SEK--DYY-E-KSP-------------INFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVE 682 (729)
Q Consensus 623 ~~~~-~--~~~--~~~-~-~sp-------------~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 682 (729)
.... . ..+ .+. . ..+ .......++|+|+++|++|..+|++.++++.+.+. ..++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~----~~~~~~ 229 (257)
T 3c6x_A 154 RENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK----PDKVYK 229 (257)
T ss_dssp HHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSC----CSEEEE
T ss_pred HHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCC----CCeEEE
Confidence 0000 0 000 000 0 001 00001125899999999999999998888887764 348999
Q ss_pred ECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 683 YEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 683 ~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
+|++||.. ..+...++.+.+.+|+++
T Consensus 230 i~~~gH~~-~~e~P~~~~~~l~~f~~~ 255 (257)
T 3c6x_A 230 VEGGDHKL-QLTKTKEIAEILQEVADT 255 (257)
T ss_dssp CCSCCSCH-HHHSHHHHHHHHHHHHHH
T ss_pred eCCCCCCc-ccCCHHHHHHHHHHHHHh
Confidence 99999974 335667888888888875
No 204
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.61 E-value=1e-14 Score=137.99 Aligned_cols=168 Identities=17% Similarity=0.062 Sum_probs=118.3
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCc---EEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGW---AFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKA 568 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~---~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 568 (729)
.|+||++||.... ...|..+++.|+++|| .|+.+|++|.+..... ..+++...++.+++. .
T Consensus 3 ~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~~------------~~~~~~~~~~~~~~~--~ 66 (181)
T 1isp_A 3 HNPVVMVHGIGGA--SFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN------------NGPVLSRFVQKVLDE--T 66 (181)
T ss_dssp CCCEEEECCTTCC--GGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHH------------HHHHHHHHHHHHHHH--H
T ss_pred CCeEEEECCcCCC--HhHHHHHHHHHHHcCCCCccEEEEecCCCCCchhh------------hHHHHHHHHHHHHHH--c
Confidence 3679999998543 4556778899999998 6999999976543221 134444444444443 2
Q ss_pred CCCcEEEEEcChHHHHHHHHHh-C--CCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCC
Q 004816 569 DEKRLCITGGSAGGYTTLAALA-F--RDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFS 645 (729)
Q Consensus 569 d~~ri~i~G~S~GG~~a~~~~~-~--~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~ 645 (729)
+.+++.++|||+||.+++.++. + |++++++|+.++....... ..+.+ . ....+
T Consensus 67 ~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~------------~~~~~-------~-----~~~~~ 122 (181)
T 1isp_A 67 GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG------------KALPG-------T-----DPNQK 122 (181)
T ss_dssp CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS------------BCCCC-------S-----CTTCC
T ss_pred CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc------------ccCCC-------C-----CCccC
Confidence 4578999999999999999987 6 8899999999987543210 00000 0 11235
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 646 CPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 646 ~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
+|+|+++|++|.++|++.+. -...+++++++++|.+.... .+..+.+.+||.+.
T Consensus 123 ~p~l~i~G~~D~~v~~~~~~---------~~~~~~~~~~~~gH~~~~~~--~~~~~~i~~fl~~~ 176 (181)
T 1isp_A 123 ILYTSIYSSADMIVMNYLSR---------LDGARNVQIHGVGHIGLLYS--SQVNSLIKEGLNGG 176 (181)
T ss_dssp CEEEEEEETTCSSSCHHHHC---------CBTSEEEEESSCCTGGGGGC--HHHHHHHHHHHTTT
T ss_pred CcEEEEecCCCccccccccc---------CCCCcceeeccCchHhhccC--HHHHHHHHHHHhcc
Confidence 79999999999999997432 22458999999999865433 36778888888654
No 205
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.61 E-value=8e-15 Score=147.50 Aligned_cols=213 Identities=8% Similarity=0.024 Sum_probs=128.4
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++..+.++ ..|+||++||.+.+. ..|...+..|++ +|.|+++|+||.|.+... .
T Consensus 7 ~g~~l~~~~~g~~----------~~~~vv~lHG~~~~~--~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~-----~--- 65 (264)
T 3ibt_A 7 NGTLMTYSESGDP----------HAPTLFLLSGWCQDH--RLFKNLAPLLAR-DFHVICPDWRGHDAKQTD-----S--- 65 (264)
T ss_dssp TTEECCEEEESCS----------SSCEEEEECCTTCCG--GGGTTHHHHHTT-TSEEEEECCTTCSTTCCC-----C---
T ss_pred CCeEEEEEEeCCC----------CCCeEEEEcCCCCcH--hHHHHHHHHHHh-cCcEEEEccccCCCCCCC-----c---
Confidence 6777776655432 247899999985443 456677777755 599999999987654332 1
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C-CCcceEEEEeccccChhH-Hhhh-----------
Q 004816 548 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F-RDTFKAGASLYGVADLSM-LRAE----------- 613 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~-~~~~~a~v~~~~~~d~~~-~~~~----------- 613 (729)
.....+++.+.+..+++. .+.+++.++|||+||.+++.++. + |++++++|+.++...... +...
T Consensus 66 ~~~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (264)
T 3ibt_A 66 GDFDSQTLAQDLLAFIDA--KGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYV 143 (264)
T ss_dssp SCCCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTTHH
T ss_pred cccCHHHHHHHHHHHHHh--cCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchhhcccChhhHH
Confidence 112344444444444443 23468999999999999999998 8 999999999987541100 0000
Q ss_pred --cchhhhhh-------------hhhhc-CChhhhh------------hcCcccccCCCCCCEEEEEeCCCCCC--ChHH
Q 004816 614 --THKFESRY-------------IDNLV-GSEKDYY------------EKSPINFVDKFSCPIILFQGLEDKVV--PPDQ 663 (729)
Q Consensus 614 --~~~~~~~~-------------~~~~~-~~~~~~~------------~~sp~~~~~~i~~PvL~i~G~~D~~v--p~~~ 663 (729)
.......+ ..... .....+. ..++...+.++++|+|++||..|... +++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~ 223 (264)
T 3ibt_A 144 AGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQL 223 (264)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHH
T ss_pred HHHHHHHHHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHH
Confidence 00000000 00000 0000010 11223556789999999987544433 3444
Q ss_pred HHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 664 ARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 664 ~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
...+.+.+ ..+++++++++||... .+...++.+.+.+||+
T Consensus 224 ~~~~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 224 QLEFAAGH----SWFHPRHIPGRTHFPS-LENPVAVAQAIREFLQ 263 (264)
T ss_dssp HHHHHHHC----TTEEEEECCCSSSCHH-HHCHHHHHHHHHHHTC
T ss_pred HHHHHHhC----CCceEEEcCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 44444433 3579999999999653 3456677777777764
No 206
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.61 E-value=8.3e-14 Score=168.71 Aligned_cols=267 Identities=11% Similarity=0.038 Sum_probs=185.8
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEE
Q 004816 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (729)
Q Consensus 89 ~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~ 168 (729)
..+..|.|+ ++.++|+.. .++...||..+.++ +..+.++... ......|+++++.|+|.. ++.||
T Consensus 204 ~~v~~~~~s-~d~l~~~~~---~dg~~~l~~~~~~g-~~~~~l~~~~--------~~~~~~~SpDG~~la~~~--~~~i~ 268 (1045)
T 1k32_A 204 THVSSPVIV-GHRIYFITD---IDGFGQIYSTDLDG-KDLRKHTSFT--------DYYPRHLNTDGRRILFSK--GGSIY 268 (1045)
T ss_dssp SCCEEEEEE-TTEEEEEEC---TTSSCEEEEEETTS-CSCEECCCCC--------SSCEEEEEESSSCEEEEE--TTEEE
T ss_pred CcccceEEe-CCEEEEEEe---ccCceEEEEEeCCC-CcceEecCCC--------CcceeeEcCCCCEEEEEe--CCEEE
Confidence 345688999 558888764 34667899887652 3555555432 112346778888888874 67899
Q ss_pred EEeCCCCCCCCeecCCCCCCC-------ceeeecceec-CCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCC
Q 004816 169 KHSIDSKDSSPLPITPDYGEP-------LVSYADGIFD-PRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGS 240 (729)
Q Consensus 169 ~~d~~~~~~~~~~lt~~~~~~-------~~~~~~~~~S-PdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~ 240 (729)
++++.+ +....+....... ...+..++|| |||++|++... ..|+++++.+++.++++...
T Consensus 269 ~~d~~~--~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~----------~~i~~~~~~~~~~~~~~~~~ 336 (1045)
T 1k32_A 269 IFNPDT--EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSR----------GQAFIQDVSGTYVLKVPEPL 336 (1045)
T ss_dssp EECTTT--CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEET----------TEEEEECTTSSBEEECSCCS
T ss_pred EecCCc--eEeeeeccCcccccccccccccccceeeecCCCCCEEEEEEc----------CEEEEEcCCCCceEEccCCC
Confidence 999965 5555554421000 0134678899 99999999872 46999999999888887666
Q ss_pred C-eeeeeeeCCCCCeEEEEEecCCCCCCCCcEEE-EEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEec
Q 004816 241 D-FYAFPRMDPRGERMAWIEWHHPNMPWDKAELW-VGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDR 317 (729)
Q Consensus 241 ~-~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~-~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~ 317 (729)
. ....+.|| ||++|+|.+. ...|| +++++ +++. ..+. +.. ..+..++|||||+ |++...+
T Consensus 337 ~~~~~~~~~s-dg~~l~~~s~--------~~~l~~~~d~~-~~~~--~~l~-~~~----~~~~~~~~SpDG~~la~~~~~ 399 (1045)
T 1k32_A 337 RIRYVRRGGD-TKVAFIHGTR--------EGDFLGIYDYR-TGKA--EKFE-ENL----GNVFAMGVDRNGKFAVVANDR 399 (1045)
T ss_dssp CEEEEEECSS-SEEEEEEEET--------TEEEEEEEETT-TCCE--EECC-CCC----CSEEEEEECTTSSEEEEEETT
T ss_pred cceEEeeeEc-CCCeEEEEEC--------CCceEEEEECC-CCCc--eEec-CCc----cceeeeEECCCCCEEEEECCC
Confidence 6 67789999 9999999872 34699 99988 5654 2233 433 4557789999999 7766544
Q ss_pred CCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEEC-------CeEEEEEEECCCCc
Q 004816 318 KNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN-------GRSYLGILDDFGHS 389 (729)
Q Consensus 318 ~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~-------g~~~ly~~d~~~g~ 389 (729)
..|+++|+++++.+.++ .....+....|++ |++.|++.+... +...|+++|+++++
T Consensus 400 ----~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp------------DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 400 ----FEIMTVDLETGKPTVIERSREAMITDFTISD------------NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp ----SEEEEEETTTCCEEEEEECSSSCCCCEEECT------------TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred ----CeEEEEECCCCceEEeccCCCCCccceEECC------------CCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 37899999999888877 3333444556665 888888877653 46789999999999
Q ss_pred eEeeccCCcceEEe--eeeCCEEEEEEeC
Q 004816 390 LSLLDIPFTDIDNI--TLGNDCLFVEGAS 416 (729)
Q Consensus 390 ~~~lt~~~~~v~~~--~~~~~~~~~~~~~ 416 (729)
.+.++.....+..+ +++++.++ +.+.
T Consensus 464 ~~~l~~~~~~~~~~~~spdG~~l~-~~s~ 491 (1045)
T 1k32_A 464 IFAATTENSHDYAPAFDADSKNLY-YLSY 491 (1045)
T ss_dssp EEECSCSSSBEEEEEECTTSCEEE-EEES
T ss_pred EEEeeCCCcccCCceEcCCCCEEE-EEec
Confidence 88888766555554 44555554 4444
No 207
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.61 E-value=2.1e-14 Score=149.25 Aligned_cols=217 Identities=16% Similarity=0.130 Sum_probs=137.9
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++....+ ++.|.||++||.+.+. ..|...+..|++. |.|+++|+||.|.+... ..
T Consensus 15 ~g~~l~y~~~G~----------g~~~pvvllHG~~~~~--~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-----~~-- 74 (316)
T 3afi_E 15 LGSSMAYRETGA----------QDAPVVLFLHGNPTSS--HIWRNILPLVSPV-AHCIAPDLIGFGQSGKP-----DI-- 74 (316)
T ss_dssp TTEEEEEEEESC----------TTSCEEEEECCTTCCG--GGGTTTHHHHTTT-SEEEEECCTTSTTSCCC-----SS--
T ss_pred CCEEEEEEEeCC----------CCCCeEEEECCCCCch--HHHHHHHHHHhhC-CEEEEECCCCCCCCCCC-----CC--
Confidence 688887665432 1125799999986543 4566677777654 99999999976654321 11
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccC---hhHHh------------
Q 004816 548 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVAD---LSMLR------------ 611 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d---~~~~~------------ 611 (729)
....+++.+.+..+++.- +.+++.|+||||||.+|+.++. +|++++++|+.++... +....
T Consensus 75 -~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (316)
T 3afi_E 75 -AYRFFDHVRYLDAFIEQR--GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAE 151 (316)
T ss_dssp -CCCHHHHHHHHHHHHHHT--TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHH
T ss_pred -CCCHHHHHHHHHHHHHHc--CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccch
Confidence 123455555544444442 3478999999999999999998 9999999999886321 11000
Q ss_pred ------hh--cch-----------hhhhhhhh-hcC--Ch---hhhh-----------------hcCc------------
Q 004816 612 ------AE--THK-----------FESRYIDN-LVG--SE---KDYY-----------------EKSP------------ 637 (729)
Q Consensus 612 ------~~--~~~-----------~~~~~~~~-~~~--~~---~~~~-----------------~~sp------------ 637 (729)
.. ... +...+... ... .. +.|. ....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (316)
T 3afi_E 152 AARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQ 231 (316)
T ss_dssp HHHHHHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHH
T ss_pred hHHHHHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHH
Confidence 00 000 00000000 000 00 0000 0000
Q ss_pred --ccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 638 --INFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 638 --~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
...+.++++|+|+++|++|..+|++.++++.+.+. ..++++++++||... .+...++.+.+.+||.+...
T Consensus 232 ~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~~~GH~~~-~e~p~~~~~~i~~fl~~~~~ 303 (316)
T 3afi_E 232 SAHAALAASSYPKLLFTGEPGALVSPEFAERFAASLT----RCALIRLGAGLHYLQ-EDHADAIGRSVAGWIAGIEA 303 (316)
T ss_dssp HHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSS----SEEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCC----CCeEEEcCCCCCCch-hhCHHHHHHHHHHHHhhcCC
Confidence 01133589999999999999999988888877664 568999999999753 35677888999999987654
No 208
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.61 E-value=6.1e-15 Score=154.35 Aligned_cols=198 Identities=13% Similarity=0.086 Sum_probs=122.5
Q ss_pred CCCEEEEEcCCCCCCccc-cchhhhHHHhhCCcEEEEecC----CCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhC
Q 004816 491 KPPLLVKSHGGPTSEARG-ILNLSIQYWTSRGWAFVDVNY----GGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGS 565 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~-~~~~~~~~la~~G~~v~~~d~----rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 565 (729)
..|+||++||.+.+...+ .|...+..| +.||.|+++|+ ||.|.+. .. ...+|+.++++++.+.
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~---~~--------~~~~d~~~~~~~l~~~ 104 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQD---HA--------HDAEDVDDLIGILLRD 104 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCC---HH--------HHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCcc---cc--------CcHHHHHHHHHHHHHH
Confidence 357899999975443333 245566777 78999999964 6544322 11 1267888888988775
Q ss_pred CCCCCCcEEEEEcChHHHHHHHHHh---CCCcceEEEEeccccChhH-------Hhh---hcchhh-----hhhhh--hh
Q 004816 566 GKADEKRLCITGGSAGGYTTLAALA---FRDTFKAGASLYGVADLSM-------LRA---ETHKFE-----SRYID--NL 625 (729)
Q Consensus 566 ~~~d~~ri~i~G~S~GG~~a~~~~~---~~~~~~a~v~~~~~~d~~~-------~~~---~~~~~~-----~~~~~--~~ 625 (729)
.+.+++.|+||||||.+++.++. +|++++++|+.++..+... +.. ...... ..... ..
T Consensus 105 --l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (335)
T 2q0x_A 105 --HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAEGRGEDSLAMLKH 182 (335)
T ss_dssp --SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHHHHTCTTCGGGGTTT
T ss_pred --cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHHHHHHHhhccCccccccchhh
Confidence 34579999999999999998886 6899999999988653210 000 000000 00000 00
Q ss_pred cC---Chhhh-------------h------hcCcccccCCCCCCEEEEEeCCCCCCChHH-HHHHHHHHHhCCCCEE---
Q 004816 626 VG---SEKDY-------------Y------EKSPINFVDKFSCPIILFQGLEDKVVPPDQ-ARKIYKALKENGLPVA--- 679 (729)
Q Consensus 626 ~~---~~~~~-------------~------~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~-~~~~~~~l~~~g~~~~--- 679 (729)
.. ....+ . ..+....+.+|++|+|+++|++|.++|++. ...+.+.+.+.-...+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~~~l~~~~~~~~~~~ 262 (335)
T 2q0x_A 183 YDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRDHTGCNRVTV 262 (335)
T ss_dssp CSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHHHHHHHHHHSSSSCEEE
T ss_pred ccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHHHHHHHHHhcCcccccc
Confidence 00 00000 0 001123467899999999999999999864 2233444433211223
Q ss_pred -----E-----EEECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 680 -----L-----VEYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 680 -----~-----~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
+ +++|++|| +..+.+.+||.+..
T Consensus 263 ~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 263 SYFNDTCDELRRVLKAAES---------EHVAAILQFLADED 295 (335)
T ss_dssp EECCCEECTTSCEEECCHH---------HHHHHHHHHHHHHH
T ss_pred ccccchhhhhhcccCCCCC---------HHHHHHHHHHHhhh
Confidence 5 78999999 23778889998764
No 209
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.60 E-value=4e-14 Score=164.59 Aligned_cols=257 Identities=7% Similarity=-0.027 Sum_probs=168.3
Q ss_pred EEECCEEEEEECCCC----cEEEEeC---CCCCC--CCeecCCCC---CCCc-eeeecceec-CCCCEEEEEEeccCCCC
Q 004816 151 RIFGDTVIFSNYKDQ----RLYKHSI---DSKDS--SPLPITPDY---GEPL-VSYADGIFD-PRFNRYVTVREDRRQDA 216 (729)
Q Consensus 151 ~~~~~~i~~~~~~~~----~l~~~d~---~~~~~--~~~~lt~~~---~~~~-~~~~~~~~S-PdG~~l~~~~~~~~~~~ 216 (729)
.+.++.++|.....+ .||+.+. .+ + ..+.|.... +... .....++|| |||++|+|+.+..+..
T Consensus 123 ~~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~--~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~- 199 (751)
T 2xe4_A 123 YVYGKYRYYTREVKGKPYKIYCRVFTDKEPG--DVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNE- 199 (751)
T ss_dssp EEETTEEEEEEECTTCCSCEEEEEETTSCTT--CTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSS-
T ss_pred eEECCEEEEEEECCCCceeEEEEEcCCCCCC--CCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCc-
Confidence 467888888876544 4778876 43 4 445444321 0011 256788999 9999999998765432
Q ss_pred CCcceEEEEEEcCCC-ce--EEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCC
Q 004816 217 LNSTTEIVAIALNGQ-NI--QVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD 293 (729)
Q Consensus 217 ~~~~~~l~~~dl~~g-~~--~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~ 293 (729)
..+||++|+++| +. ..+. ....+++|||||++|+|++.++.+ ...+||++++. ++......+..+.+
T Consensus 200 ---~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~---~~~~v~~~~lg-t~~~~~~lv~~~~~ 269 (751)
T 2xe4_A 200 ---VYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETL---RENKVWRHVMG-KLQSEDVCLYEEHN 269 (751)
T ss_dssp ---CEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTC---CEEEEEEEETT-SCGGGCEEEEECCC
T ss_pred ---eEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCC---CCCEEEEEECC-CCchhcEEEEecCC
Confidence 367999999998 62 1222 124579999999999999866532 33579999997 55432233443332
Q ss_pred CCccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCC--eE--EEeeccCccccCCcccccCcceeeeeecCCCCEE
Q 004816 294 PTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN--EV--LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLI 368 (729)
Q Consensus 294 ~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g--~~--~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l 368 (729)
. .....+.|||||+ |++.+.. .+...||++|++++ +. +.|+... ..+.|++. |. +++.|
T Consensus 270 ~---~~~~~~~~SpDg~~l~~~~~~-~~~~~l~~~d~~~~~~~~~~~~l~~~~---~~~~~s~~-----~~----~g~~l 333 (751)
T 2xe4_A 270 P---LFSAFMYKAADTNTLCIGSQS-PETAEVHLLDLRKGNAHNTLEIVRPRE---KGVRYDVQ-----MH----GTSHL 333 (751)
T ss_dssp T---TCEEEEEECTTSSEEEEEEEC-SSCEEEEEEESSSCTTCCCEEESSCCC---TTCCEEEE-----EE----TTTEE
T ss_pred C---ceEEEEEECCCCCEEEEEecC-CCCceEEEEECCCCCCCceeEEeecCC---CCceEEEe-----ee----eCCEE
Confidence 1 2335688999999 8888776 56788999999875 45 6665322 23445431 11 57889
Q ss_pred EEEEEEC--CeEEEEEEECCC-CceEe-eccCCc--ceEEeeeeCCEEEEEEeCCCCCceEEEEEc-------CCCc-ce
Q 004816 369 ACSYRQN--GRSYLGILDDFG-HSLSL-LDIPFT--DIDNITLGNDCLFVEGASGVEPSSVAKVTL-------DDHK-LK 434 (729)
Q Consensus 369 ~~~s~~~--g~~~ly~~d~~~-g~~~~-lt~~~~--~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~-------~~~~-~~ 434 (729)
++.++++ +..+||.+++++ ++++. |....+ .+..+...++.+++. ...+....|+++++ ++++ .+
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~-~~~~g~~~l~~~dl~~~~~~~~~g~~~~ 412 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVA-GRRAGLTRIWTMMADSQDGVFKAGTGLR 412 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEE-EEETTEEEEEEEECCTTTSCCCTTTCCE
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEE-EEeCCEEEEEEEecccccccccCCccce
Confidence 9999876 678999999986 45555 444333 345555556655544 44556678999996 5666 66
Q ss_pred eee
Q 004816 435 AVD 437 (729)
Q Consensus 435 ~lt 437 (729)
+|+
T Consensus 413 ~l~ 415 (751)
T 2xe4_A 413 EVV 415 (751)
T ss_dssp ECC
T ss_pred EEC
Confidence 654
No 210
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.60 E-value=1.3e-14 Score=149.09 Aligned_cols=214 Identities=14% Similarity=0.122 Sum_probs=128.6
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++.... ..|.||++||.+.+ ...|...+..|+++ |.|+++|+||.|.+... . . ...
T Consensus 17 ~g~~l~y~~~G------------~g~~lvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-~--~-~~~ 77 (294)
T 1ehy_A 17 PDVKIHYVREG------------AGPTLLLLHGWPGF--WWEWSKVIGPLAEH-YDVIVPDLRGFGDSEKP-D--L-NDL 77 (294)
T ss_dssp SSCEEEEEEEE------------CSSEEEEECCSSCC--GGGGHHHHHHHHTT-SEEEEECCTTSTTSCCC-C--T-TCG
T ss_pred CCEEEEEEEcC------------CCCEEEEECCCCcc--hhhHHHHHHHHhhc-CEEEecCCCCCCCCCCC-c--c-ccc
Confidence 78888765432 13679999998644 35567777888776 99999999987654432 0 0 000
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEecccc-Chh-H--------------H
Q 004816 548 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVA-DLS-M--------------L 610 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~-d~~-~--------------~ 610 (729)
.....+++.+.+..+++.- +.+++.|+||||||.+++.++. +|++++++|+.++.. ... . +
T Consensus 78 ~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (294)
T 1ehy_A 78 SKYSLDKAADDQAALLDAL--GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQF 155 (294)
T ss_dssp GGGCHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHH
T ss_pred cCcCHHHHHHHHHHHHHHc--CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEe
Confidence 0122444444444444432 3468999999999999999998 999999999998632 110 0 0
Q ss_pred hh--------hc-----chhhhhhhhhhcC-----Ch---hhhh-----------------hc--Cccc-----ccCCCC
Q 004816 611 RA--------ET-----HKFESRYIDNLVG-----SE---KDYY-----------------EK--SPIN-----FVDKFS 645 (729)
Q Consensus 611 ~~--------~~-----~~~~~~~~~~~~~-----~~---~~~~-----------------~~--sp~~-----~~~~i~ 645 (729)
.. .. ..+...+...... .. +.+. .. .... .+.+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 235 (294)
T 1ehy_A 156 HQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSD 235 (294)
T ss_dssp TTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBC
T ss_pred cCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCC
Confidence 00 00 0000000000000 00 0010 00 0001 123789
Q ss_pred CCEEEEEeCCCCCCCh-HHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHH
Q 004816 646 CPIILFQGLEDKVVPP-DQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFF 707 (729)
Q Consensus 646 ~PvL~i~G~~D~~vp~-~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl 707 (729)
+|+|+++|++|..+|+ .....+.+.+ ..+++++++++||... .+...++.+.+.+|+
T Consensus 236 ~P~Lvi~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 236 LPVTMIWGLGDTCVPYAPLIEFVPKYY----SNYTMETIEDCGHFLM-VEKPEIAIDRIKTAF 293 (294)
T ss_dssp SCEEEEEECCSSCCTTHHHHHHHHHHB----SSEEEEEETTCCSCHH-HHCHHHHHHHHHHHC
T ss_pred CCEEEEEeCCCCCcchHHHHHHHHHHc----CCCceEEeCCCCCChh-hhCHHHHHHHHHHHh
Confidence 9999999999999884 4555554443 2579999999999743 355667777777775
No 211
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.60 E-value=1.7e-13 Score=165.90 Aligned_cols=295 Identities=11% Similarity=0.063 Sum_probs=187.6
Q ss_pred cCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccc--cccc--cCCceEE-EECCEEEEEECCC
Q 004816 91 LGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRT--TAQE--YGGGAFR-IFGDTVIFSNYKD 164 (729)
Q Consensus 91 ~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~--~~~~--~~~~~~~-~~~~~i~~~~~~~ 164 (729)
...+.|+| |+.++|.. .++ |+.++.. ++....+......... .-+. .....|+ +++..+++.. .
T Consensus 247 ~~~~~~SpDG~~la~~~-----~~~--i~~~d~~-~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~ 316 (1045)
T 1k32_A 247 YYPRHLNTDGRRILFSK-----GGS--IYIFNPD-TEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--R 316 (1045)
T ss_dssp SCEEEEEESSSCEEEEE-----TTE--EEEECTT-TCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--T
T ss_pred cceeeEcCCCCEEEEEe-----CCE--EEEecCC-ceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE--c
Confidence 34678999 88888863 233 5555543 2222222211100000 0011 1223455 5566788876 6
Q ss_pred CcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEE-EEEcCCCceEEeeeCCCee
Q 004816 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV-AIALNGQNIQVLVSGSDFY 243 (729)
Q Consensus 165 ~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~-~~dl~~g~~~~lt~~~~~~ 243 (729)
+.|+++++.+ +..++++... ...+..++|| ||+.|++..++ ..|| ++++++++.+.++......
T Consensus 317 ~~i~~~~~~~--~~~~~~~~~~---~~~~~~~~~s-dg~~l~~~s~~---------~~l~~~~d~~~~~~~~l~~~~~~~ 381 (1045)
T 1k32_A 317 GQAFIQDVSG--TYVLKVPEPL---RIRYVRRGGD-TKVAFIHGTRE---------GDFLGIYDYRTGKAEKFEENLGNV 381 (1045)
T ss_dssp TEEEEECTTS--SBEEECSCCS---CEEEEEECSS-SEEEEEEEETT---------EEEEEEEETTTCCEEECCCCCCSE
T ss_pred CEEEEEcCCC--CceEEccCCC---cceEEeeeEc-CCCeEEEEECC---------CceEEEEECCCCCceEecCCccce
Confidence 7899999987 7777777652 2367889999 99999988761 5799 9999999988888444566
Q ss_pred eeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecC----
Q 004816 244 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRK---- 318 (729)
Q Consensus 244 ~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~---- 318 (729)
..++|||||++|++... ...|+++|++ +|+. ..+..+.. ..+..++|||||+ |++.....
T Consensus 382 ~~~~~SpDG~~la~~~~--------~~~v~~~d~~-tg~~--~~~~~~~~----~~v~~~~~SpDG~~la~~~~~~~~~~ 446 (1045)
T 1k32_A 382 FAMGVDRNGKFAVVAND--------RFEIMTVDLE-TGKP--TVIERSRE----AMITDFTISDNSRFIAYGFPLKHGET 446 (1045)
T ss_dssp EEEEECTTSSEEEEEET--------TSEEEEEETT-TCCE--EEEEECSS----SCCCCEEECTTSCEEEEEEEECSSTT
T ss_pred eeeEECCCCCEEEEECC--------CCeEEEEECC-CCce--EEeccCCC----CCccceEECCCCCeEEEEecCccccc
Confidence 78999999999998872 2469999998 7775 33443443 4557899999999 87777642
Q ss_pred --CCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCe---------------EEEE
Q 004816 319 --NGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR---------------SYLG 381 (729)
Q Consensus 319 --~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~---------------~~ly 381 (729)
.+...|+++|+++++.+.++........+.|++ +++.|++.+.+.+. ..+|
T Consensus 447 ~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~sp------------dG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1045)
T 1k32_A 447 DGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDA------------DSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPF 514 (1045)
T ss_dssp CSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECT------------TSCEEEEEESCCCCCEECSSSSCEECCSCBEEE
T ss_pred cCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcC------------CCCEEEEEecccCCcCcchhccccccccCceeE
Confidence 234689999999998777775443444456665 77788877753321 1334
Q ss_pred EEECC------------------------CC--ceEeeccCCcceEEe-eeeCCEEEEE----------EeCCCCCceEE
Q 004816 382 ILDDF------------------------GH--SLSLLDIPFTDIDNI-TLGNDCLFVE----------GASGVEPSSVA 424 (729)
Q Consensus 382 ~~d~~------------------------~g--~~~~lt~~~~~v~~~-~~~~~~~~~~----------~~~~~~~~~ly 424 (729)
.+.+. +. .+..++.+...+..+ ..+++.+++. .++...+..+|
T Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~ 594 (1045)
T 1k32_A 515 VIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLL 594 (1045)
T ss_dssp EEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEE
T ss_pred EEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEE
Confidence 43322 11 122333333445555 3444555553 13445577899
Q ss_pred EEEcCCCcceeee
Q 004816 425 KVTLDDHKLKAVD 437 (729)
Q Consensus 425 ~~d~~~~~~~~lt 437 (729)
++|+.+++.+.+.
T Consensus 595 ~~d~~~~~~~~l~ 607 (1045)
T 1k32_A 595 KYDVKTRKVTEVK 607 (1045)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEECCCCcEEEee
Confidence 9999998865543
No 212
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.59 E-value=4e-15 Score=153.37 Aligned_cols=201 Identities=15% Similarity=0.054 Sum_probs=127.2
Q ss_pred CCCCEEEEEcCCCCCCccccchhhhHHHhhC--CcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCC
Q 004816 490 EKPPLLVKSHGGPTSEARGILNLSIQYWTSR--GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 567 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~--G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 567 (729)
...|.||++||.+.+ ...|...++.|+++ ||.|+++|+||.+....... ...+|+.+.+..+.+..
T Consensus 34 ~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~---------~~~~~~~~~l~~~~~~~- 101 (302)
T 1pja_A 34 ASYKPVIVVHGLFDS--SYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLW---------EQVQGFREAVVPIMAKA- 101 (302)
T ss_dssp -CCCCEEEECCTTCC--GGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH---------HHHHHHHHHHHHHHHHC-
T ss_pred CCCCeEEEECCCCCC--hhHHHHHHHHHHhcCCCcEEEEeccCCCccchhhHH---------HHHHHHHHHHHHHhhcC-
Confidence 345779999997544 34577888999998 99999999997643221110 23566766677666653
Q ss_pred CCCCcEEEEEcChHHHHHHHHHh-CCC-cceEEEEeccccChh----HHhh-hcchhhhh--------------hhhhhc
Q 004816 568 ADEKRLCITGGSAGGYTTLAALA-FRD-TFKAGASLYGVADLS----MLRA-ETHKFESR--------------YIDNLV 626 (729)
Q Consensus 568 ~d~~ri~i~G~S~GG~~a~~~~~-~~~-~~~a~v~~~~~~d~~----~~~~-~~~~~~~~--------------~~~~~~ 626 (729)
.+++.++|||+||.+++.++. +|+ +++++|+.++..... .... ........ .....+
T Consensus 102 --~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (302)
T 1pja_A 102 --PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYW 179 (302)
T ss_dssp --TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGGGSTGGGGB
T ss_pred --CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHHHhhhhhcc
Confidence 478999999999999999998 898 799999998754211 0000 00000000 000000
Q ss_pred CC---hhhhhhcC-----------------cccccCCCCCCEEEEEeCCCCCCChHHHHHHHHH----------------
Q 004816 627 GS---EKDYYEKS-----------------PINFVDKFSCPIILFQGLEDKVVPPDQARKIYKA---------------- 670 (729)
Q Consensus 627 ~~---~~~~~~~s-----------------p~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~---------------- 670 (729)
.+ .+.+.... -...+.+++ |+|+++|++|.++|++.+..+.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (302)
T 1pja_A 180 HDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYL 258 (302)
T ss_dssp CCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHHH
T ss_pred cChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhhh
Confidence 00 01110000 023466788 999999999999999877766322
Q ss_pred --------HHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHH
Q 004816 671 --------LKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFF 707 (729)
Q Consensus 671 --------l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl 707 (729)
+...+ ++++++++++||... .+....+.+.+.+|+
T Consensus 259 ~~~~~~~~l~~~~-~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 259 RDSFGLKTLLARG-AIVRCPMAGISHTAW-HSNRTLYETCIEPWL 301 (302)
T ss_dssp TTTTSHHHHHHTT-CEEEEECSSCCTTTT-TSCHHHHHHHTGGGC
T ss_pred hhhhchhhHhhcC-CeEEEEecCcccccc-ccCHHHHHHHHHHhc
Confidence 22222 489999999999754 345566666666664
No 213
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.59 E-value=1.6e-14 Score=145.81 Aligned_cols=198 Identities=13% Similarity=0.093 Sum_probs=119.5
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
.|.||++||.+.+ ...|...+..|++.||.|+++|+||.|.+... .. ...+++.+.+..+++...++..
T Consensus 16 ~~~vvllHG~~~~--~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~---~~------~~~~~~a~~l~~~l~~l~~~~~ 84 (264)
T 1r3d_A 16 TPLVVLVHGLLGS--GADWQPVLSHLARTQCAALTLDLPGHGTNPER---HC------DNFAEAVEMIEQTVQAHVTSEV 84 (264)
T ss_dssp BCEEEEECCTTCC--GGGGHHHHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTTCCTTS
T ss_pred CCcEEEEcCCCCC--HHHHHHHHHHhcccCceEEEecCCCCCCCCCC---Cc------cCHHHHHHHHHHHHHHhCcCCC
Confidence 4789999998543 35577788888768999999999987654431 10 1234454444444444333222
Q ss_pred cEEEEEcChHHHHHHH---HHh-CCCcceEEEEeccccChhHH-------------hhh-----cchhhhhhhh-hhcC-
Q 004816 572 RLCITGGSAGGYTTLA---ALA-FRDTFKAGASLYGVADLSML-------------RAE-----THKFESRYID-NLVG- 627 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~---~~~-~~~~~~a~v~~~~~~d~~~~-------------~~~-----~~~~~~~~~~-~~~~- 627 (729)
++.|+||||||.+++. ++. +|++++++|+.++....... ... .......+.. ....
T Consensus 85 p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1r3d_A 85 PVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSS 164 (264)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGTT
T ss_pred ceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhhhhhhhc
Confidence 4999999999999999 776 89999999998764321100 000 0000000000 0000
Q ss_pred ----------------Chh----hhhh------cCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEE
Q 004816 628 ----------------SEK----DYYE------KSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALV 681 (729)
Q Consensus 628 ----------------~~~----~~~~------~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~ 681 (729)
... .+.. .+....+.++++|+|+++|++|..+ ..+.+.+. ++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~-----~~~~~~~~-----~~~~ 234 (264)
T 1r3d_A 165 LNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAESSG-----LSYS 234 (264)
T ss_dssp CCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HHHHHHHC-----SEEE
T ss_pred cCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchH-----HHHHHHhC-----CcEE
Confidence 000 0000 1112235678999999999999743 12333332 4789
Q ss_pred EECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 682 EYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 682 ~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
+++++||... .+...++.+.+.+|+.++.
T Consensus 235 ~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 235 QVAQAGHNVH-HEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp EETTCCSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred EcCCCCCchh-hcCHHHHHHHHHHHHHHhc
Confidence 9999999753 3556788889999998754
No 214
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.58 E-value=3.5e-14 Score=144.90 Aligned_cols=219 Identities=11% Similarity=0.061 Sum_probs=127.8
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchh-----hhHHHhhCCcEEEEecCCCCCCCchhHHHh
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL-----SIQYWTSRGWAFVDVNYGGSTGYGREFRER 542 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~-----~~~~la~~G~~v~~~d~rGs~g~g~~~~~~ 542 (729)
+|.++++..+.+.+ ...|+||++||.+.+... .|.. .+..|++ +|.|+++|+||.|.......
T Consensus 19 ~~~~l~y~~~G~~~--------~~~p~vvllHG~~~~~~~-~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~-- 86 (286)
T 2qmq_A 19 PYGSVTFTVYGTPK--------PKRPAIFTYHDVGLNYKS-CFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFP-- 86 (286)
T ss_dssp TTEEEEEEEESCCC--------TTCCEEEEECCTTCCHHH-HHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCC--
T ss_pred CCeEEEEEeccCCC--------CCCCeEEEeCCCCCCchh-hhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCCC--
Confidence 78888877664421 235889999998554321 1222 5566665 69999999998643211100
Q ss_pred hccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhh--------
Q 004816 543 LLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAE-------- 613 (729)
Q Consensus 543 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~-------- 613 (729)
........+++.+.+..+++. ++.+++.++|||+||.+++.++. +|++++++|+.++......+...
T Consensus 87 --~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 162 (286)
T 2qmq_A 87 --LGYQYPSLDQLADMIPCILQY--LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGL 162 (286)
T ss_dssp --TTCCCCCHHHHHHTHHHHHHH--HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHHHHHT
T ss_pred --CCCCccCHHHHHHHHHHHHHH--hCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhhhccc
Confidence 011001233333333333332 13368999999999999999998 99999999999986532111000
Q ss_pred cchhhhh--------------------hhhhhcC--Ch---hhhh----hcCc----ccccCCCCCCEEEEEeCCCCCCC
Q 004816 614 THKFESR--------------------YIDNLVG--SE---KDYY----EKSP----INFVDKFSCPIILFQGLEDKVVP 660 (729)
Q Consensus 614 ~~~~~~~--------------------~~~~~~~--~~---~~~~----~~sp----~~~~~~i~~PvL~i~G~~D~~vp 660 (729)
....... +...... .. ..+. .... ...+.++++|+|+++|++|..+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 242 (286)
T 2qmq_A 163 TSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED 242 (286)
T ss_dssp TSCHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH
T ss_pred cccchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc
Confidence 0000000 0000000 00 0010 0000 12456889999999999999886
Q ss_pred hHHHHHHHHHHHhCCC-CEEEEEECCCCcccCCcccHHHHHHHHHHHHH
Q 004816 661 PDQARKIYKALKENGL-PVALVEYEGEQHGFRKAENIKFTLEQQMVFFA 708 (729)
Q Consensus 661 ~~~~~~~~~~l~~~g~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 708 (729)
. ..+.+++... .+++++++++||.+.. +...++.+.+.+||.
T Consensus 243 -~----~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 243 -A----VVECNSKLDPTQTSFLKMADSGGQPQL-TQPGKLTEAFKYFLQ 285 (286)
T ss_dssp -H----HHHHHHHSCGGGEEEEEETTCTTCHHH-HCHHHHHHHHHHHHC
T ss_pred -H----HHHHHHHhcCCCceEEEeCCCCCcccc-cChHHHHHHHHHHhc
Confidence 2 2344444433 6899999999997533 446677778888874
No 215
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.58 E-value=1e-14 Score=146.63 Aligned_cols=193 Identities=14% Similarity=0.085 Sum_probs=121.9
Q ss_pred EEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcE
Q 004816 494 LLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRL 573 (729)
Q Consensus 494 ~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri 573 (729)
.||++||.+.+ ...|...+..|+ .+|.|+++|+||.|.+... ...+.++ .++.+.+. ++ +++
T Consensus 15 ~vvllHG~~~~--~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~---------~~~~~~~---~~~~l~~~--l~-~~~ 76 (258)
T 1m33_A 15 HLVLLHGWGLN--AEVWRCIDEELS-SHFTLHLVDLPGFGRSRGF---------GALSLAD---MAEAVLQQ--AP-DKA 76 (258)
T ss_dssp EEEEECCTTCC--GGGGGGTHHHHH-TTSEEEEECCTTSTTCCSC---------CCCCHHH---HHHHHHTT--SC-SSE
T ss_pred eEEEECCCCCC--hHHHHHHHHHhh-cCcEEEEeeCCCCCCCCCC---------CCcCHHH---HHHHHHHH--hC-CCe
Confidence 79999997543 345666777775 5899999999976654322 1122333 44555554 34 789
Q ss_pred EEEEcChHHHHHHHHHh-CCCcceEEEEeccccChh--------------HHhhhc----chhhhhhhhh-hcC------
Q 004816 574 CITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLS--------------MLRAET----HKFESRYIDN-LVG------ 627 (729)
Q Consensus 574 ~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~--------------~~~~~~----~~~~~~~~~~-~~~------ 627 (729)
.|+||||||.+++.++. +|++++++|+.++..... .+.... ......+... ..+
T Consensus 77 ~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (258)
T 1m33_A 77 IWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQ 156 (258)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHH
T ss_pred EEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCccchh
Confidence 99999999999999998 999999999987542110 000000 0000000000 000
Q ss_pred ---------------Chh-------hhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECC
Q 004816 628 ---------------SEK-------DYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEG 685 (729)
Q Consensus 628 ---------------~~~-------~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 685 (729)
... .+...+....+.++++|+|+++|++|..+|++.++.+.+.+. .++++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~ 232 (258)
T 1m33_A 157 DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP----HSESYIFAK 232 (258)
T ss_dssp HHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCT----TCEEEEETT
T ss_pred hHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhCc----cceEEEeCC
Confidence 000 011112223466789999999999999999877666554432 458999999
Q ss_pred CCcccCCcccHHHHHHHHHHHHHH
Q 004816 686 EQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 686 ~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
+||.... +...++.+.+.+|+.+
T Consensus 233 ~gH~~~~-e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 233 AAHAPFI-SHPAEFCHLLVALKQR 255 (258)
T ss_dssp CCSCHHH-HSHHHHHHHHHHHHTT
T ss_pred CCCCccc-cCHHHHHHHHHHHHHh
Confidence 9997533 4456778888888854
No 216
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.58 E-value=4e-15 Score=152.35 Aligned_cols=200 Identities=10% Similarity=0.055 Sum_probs=123.2
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
.|+||++||.+.......|...+..|+ +||.|+++|+||.|..... .......+++...+..+++.. +.+
T Consensus 41 ~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~~--~~~ 110 (292)
T 3l80_A 41 NPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPNSGYSPVS-------NQANVGLRDWVNAILMIFEHF--KFQ 110 (292)
T ss_dssp SSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTTSTTSCCC-------CCTTCCHHHHHHHHHHHHHHS--CCS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCCCCCCCCC-------CcccccHHHHHHHHHHHHHHh--CCC
Confidence 389999997433333446677777776 6999999999986654311 111234566666666555553 345
Q ss_pred cEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHH--------------hhhcch------hhhhhhhhhcC---
Q 004816 572 RLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSML--------------RAETHK------FESRYIDNLVG--- 627 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~--------------~~~~~~------~~~~~~~~~~~--- 627 (729)
++.|+|||+||.+++.++. +|++++++|+.+|......+ ...... +........+.
T Consensus 111 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (292)
T 3l80_A 111 SYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQ 190 (292)
T ss_dssp EEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHH
T ss_pred CeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHH
Confidence 8999999999999999988 99999999999843211100 000000 00000000000
Q ss_pred ----------ChhhhhhcCc---------------ccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEE
Q 004816 628 ----------SEKDYYEKSP---------------INFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVE 682 (729)
Q Consensus 628 ----------~~~~~~~~sp---------------~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 682 (729)
....+....+ ...+.+ ++|+|+++|++|..++++ + ++.+.+. ..+ ++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~~----~~~-~~ 262 (292)
T 3l80_A 191 FKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKHT----QTK-LI 262 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCCT----TCE-EE
T ss_pred HHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEccCccccchH-H-HHhccCC----Cce-ee
Confidence 0001111111 123445 899999999999988877 4 4443322 346 89
Q ss_pred ECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 683 YEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 683 ~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
++++||.+.. +...++.+.+.+|++++
T Consensus 263 ~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 263 LCGQHHYLHW-SETNSILEKVEQLLSNH 289 (292)
T ss_dssp ECCSSSCHHH-HCHHHHHHHHHHHHHTC
T ss_pred eCCCCCcchh-hCHHHHHHHHHHHHHhc
Confidence 9999997543 45677888889998864
No 217
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.56 E-value=4.2e-14 Score=143.90 Aligned_cols=222 Identities=15% Similarity=0.113 Sum_probs=137.9
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecC--------CCCCCCchhHHH
Q 004816 470 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNY--------GGSTGYGREFRE 541 (729)
Q Consensus 470 ~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~--------rGs~g~g~~~~~ 541 (729)
..+...++.|.+ ..++.|+||-+||+.. ...+||+|+.+++ +|+.|+|.-+..
T Consensus 90 ~~~~~~i~lP~~------~~~p~Pvii~i~~~~~-------------~~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~l 150 (375)
T 3pic_A 90 ISFTVTITYPSS------GTAPYPAIIGYGGGSL-------------PAPAGVAMINFNNDNIAAQVNTGSRGQGKFYDL 150 (375)
T ss_dssp EEEEEEEECCSS------SCSSEEEEEEETTCSS-------------CCCTTCEEEEECHHHHSCCSSGGGTTCSHHHHH
T ss_pred eEEEEEEECCCC------CCCCccEEEEECCCcc-------------ccCCCeEEEEecccccccccCCCCccceecccc
Confidence 357888999976 2456799999998511 1468999999987 667778874321
Q ss_pred h-hccCCCccc--HHHHHHHHHHHHhCC--CCCCCcEEEEEcChHHHHHHHHHhCCCcceEEEEeccccChhHHhh----
Q 004816 542 R-LLGRWGIVD--VNDCCSCATFLVGSG--KADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVADLSMLRA---- 612 (729)
Q Consensus 542 ~-~~~~~~~~~--~~D~~~~~~~l~~~~--~~d~~ri~i~G~S~GG~~a~~~~~~~~~~~a~v~~~~~~d~~~~~~---- 612 (729)
. ....||... ..|+.++++||..++ .+|++||+++|||+||..|+++++..++|+++|+.++..+-.....
T Consensus 151 y~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~Ri~~~v~~~~g~~G~~~~R~~~~ 230 (375)
T 3pic_A 151 YGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEKRIVLTLPQESGAGGSACWRISDY 230 (375)
T ss_dssp HCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCTTEEEEEEESCCTTTTSCHHHHHH
T ss_pred cCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCCceEEEEeccCCCCchhhhhhhhh
Confidence 1 123466554 359999999999998 8999999999999999999999997779999999886433211110
Q ss_pred ------hcchhhhhhhhhhc--CChhhhh---hcCcccc---cCCC-CCCEEEEEeCCCCCCChHHHHHHHHHH----Hh
Q 004816 613 ------ETHKFESRYIDNLV--GSEKDYY---EKSPINF---VDKF-SCPIILFQGLEDKVVPPDQARKIYKAL----KE 673 (729)
Q Consensus 613 ------~~~~~~~~~~~~~~--~~~~~~~---~~sp~~~---~~~i-~~PvL~i~G~~D~~vp~~~~~~~~~~l----~~ 673 (729)
.............+ .+...|. ..-|+.+ +.-| ..|+|++.| +|..++++.....+.++ +.
T Consensus 231 ~~~~Ge~v~~~~~~~~e~~Wf~~~~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~~~g~~~~~~~a~~VY~~ 309 (375)
T 3pic_A 231 LKSQGANIQTASEIIGEDPWFSTTFNSYVNQVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLGPQSCFGCMTAAHMAWQA 309 (375)
T ss_dssp HHHTTCCCCCHHHHTTTCSCSCGGGGGTTTCGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGCHHHHHHHHHHHHHHHHH
T ss_pred hcccCccccccccccCcccccccchhhhcccccccCcCHHHHHHHhCCceEEEecC-CCcccCcHHHHHHHHHHHHHHHH
Confidence 00000000000000 0011111 0112111 2222 368999999 99888887554333333 44
Q ss_pred CCC--CEEEEEECCCCcc-cCCcccHHHHHHHHHHHHHHHhCCCCC
Q 004816 674 NGL--PVALVEYEGEQHG-FRKAENIKFTLEQQMVFFARVVGHFDV 716 (729)
Q Consensus 674 ~g~--~~~~~~~~~~gH~-~~~~~~~~~~~~~~~~fl~~~l~~~~~ 716 (729)
.|. .+.+....+.+|. |.. +..+.+.+||+++|++...
T Consensus 310 lG~~d~~~~~~~ggH~Hc~fp~-----~~~~~~~~F~~k~L~~~~~ 350 (375)
T 3pic_A 310 LGVSDHMGYSQIGAHAHCAFPS-----NQQSQLTAFVQKFLLGQST 350 (375)
T ss_dssp TTCGGGEEEECCSCCSTTCCCG-----GGHHHHHHHHHHHTSCCCC
T ss_pred cCCccceEEEeeCCCccccCCH-----HHHHHHHHHHHHHhCCCCC
Confidence 454 5666543334552 322 2336678999999986543
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.56 E-value=2.9e-13 Score=156.26 Aligned_cols=263 Identities=9% Similarity=-0.018 Sum_probs=167.6
Q ss_pred EEEECCEEEEEECCCC----cEEEEeCCCCCCCCeecCCCC---CCCceeeecceecCCCCEEEEEEeccCCCCCCcceE
Q 004816 150 FRIFGDTVIFSNYKDQ----RLYKHSIDSKDSSPLPITPDY---GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTE 222 (729)
Q Consensus 150 ~~~~~~~i~~~~~~~~----~l~~~d~~~~~~~~~~lt~~~---~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~ 222 (729)
....++.++|.....+ .+|+.+.++ ..+.|.+.+ ......+..++|||||++|+|+.+..+.+ ...
T Consensus 84 p~~~g~~~y~~~~~~~~~~~~~~r~~~~~---~~~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~----~~~ 156 (693)
T 3iuj_A 84 PFREGRYHYFFKNDGLQNQNVLWRQQEGK---PAEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSD----WRE 156 (693)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEECTTS---CCEEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCC----EEE
T ss_pred CEEECCEEEEEEEcCCCceeEEEEeCCCC---CcEEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCc----eEE
Confidence 3456777766654332 466655443 334333221 11124567889999999999998765433 478
Q ss_pred EEEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCC-----CCCCcEEEEEEecCCCCeeeeEEecCCC-CCc
Q 004816 223 IVAIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNM-----PWDKAELWVGYISENGDVYKRVCVAGFD-PTI 296 (729)
Q Consensus 223 l~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~-----~~~~~~l~~~d~~~~g~~~~~~~~~~~~-~~~ 296 (729)
|+++|+++|+....+-......+++|| ||+.|+|++.+.... .+...+||++++. ++......+....+ ..
T Consensus 157 i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lg-t~~~~~~~v~~~~~~~~- 233 (693)
T 3iuj_A 157 IHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLG-TAQEDDRLVFGAIPAQH- 233 (693)
T ss_dssp EEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETT-SCGGGCEEEESCSGGGC-
T ss_pred EEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECC-CCcccceEEEecCCCCC-
Confidence 999999999876654322224678999 999999999664300 0234679999987 55433333443321 01
Q ss_pred cccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCC--eEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEE
Q 004816 297 VESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN--EVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR 373 (729)
Q Consensus 297 ~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g--~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~ 373 (729)
.....+.|||||+ |++.+........||++|++++ +.+.|+........+ |.+ +++.||+.++
T Consensus 234 -~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~------------~g~~l~~~t~ 299 (693)
T 3iuj_A 234 -HRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDN------------KGSTLYLLTN 299 (693)
T ss_dssp -CSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEE------------ETTEEEEEEC
T ss_pred -eEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Eec------------cCCEEEEEEC
Confidence 2345688999999 7777765223358999998776 567776433111111 332 7788998887
Q ss_pred ECC-eEEEEEEECCCCce---EeeccCCcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcceeee
Q 004816 374 QNG-RSYLGILDDFGHSL---SLLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 374 ~~g-~~~ly~~d~~~g~~---~~lt~~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt 437 (729)
+++ ..+|+.++++++.. +.|+.....+..++.+++.+++... .+....|++++++++..+.|+
T Consensus 300 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~-~~g~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 300 RDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYM-VDATARVEQFDYEGKRVREVA 366 (693)
T ss_dssp TTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEE-ETTEEEEEEECTTSCEEEEEC
T ss_pred CCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEEEEEEE-ECCeeEEEEEECCCCeeEEee
Confidence 665 57899999988764 6666544333366777777766554 344557999999887665554
No 219
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.55 E-value=8e-13 Score=141.30 Aligned_cols=239 Identities=11% Similarity=0.022 Sum_probs=153.8
Q ss_pred EEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcC
Q 004816 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (729)
Q Consensus 150 ~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~ 229 (729)
|++++..+++....++.|+++|+.+ ++....... ......++|+|||++|++..... ..|+++|+.
T Consensus 39 ~s~dg~~l~~~~~~d~~i~v~d~~~--~~~~~~~~~----~~~v~~~~~spdg~~l~~~~~~~--------~~v~v~d~~ 104 (391)
T 1l0q_A 39 ISPDGTKVYVANAHSNDVSIIDTAT--NNVIATVPA----GSSPQGVAVSPDGKQVYVTNMAS--------STLSVIDTT 104 (391)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEETTT--TEEEEEEEC----SSSEEEEEECTTSSEEEEEETTT--------TEEEEEETT
T ss_pred ECCCCCEEEEECCCCCeEEEEECCC--CeEEEEEEC----CCCccceEECCCCCEEEEEECCC--------CEEEEEECC
Confidence 3334556767776778999999987 554433322 12567888999999987775432 579999999
Q ss_pred CCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCC
Q 004816 230 GQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 309 (729)
Q Consensus 230 ~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG 309 (729)
+++..............+|+|||++|++.... ...|+++|+. +++. ...+... .....+.|+|||
T Consensus 105 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------~~~v~~~d~~-~~~~--~~~~~~~-----~~~~~~~~~~dg 169 (391)
T 1l0q_A 105 SNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG-------DKTVSVINTV-TKAV--INTVSVG-----RSPKGIAVTPDG 169 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECTTSSEEEEEETT-------TTEEEEEETT-TTEE--EEEEECC-----SSEEEEEECTTS
T ss_pred CCeEEEEEeCCCCcceEEECCCCCEEEEEeCC-------CCEEEEEECC-CCcE--EEEEecC-----CCcceEEECCCC
Confidence 98877666655566788999999999877632 3469999998 6664 3333332 234678899999
Q ss_pred cEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCc
Q 004816 310 ELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 389 (729)
Q Consensus 310 ~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~ 389 (729)
+.++.+.. ....|+++|+.+++............ .+.|.+ +++.++..........|+++|+.+++
T Consensus 170 ~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~---------~~~~~~---~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 170 TKVYVANF--DSMSISVIDTVTNSVIDTVKVEAAPS---------GIAVNP---EGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp SEEEEEET--TTTEEEEEETTTTEEEEEEECSSEEE---------EEEECT---TSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred CEEEEEeC--CCCEEEEEECCCCeEEEEEecCCCcc---------ceEECC---CCCEEEEEecCcCCCcEEEEECCCCe
Confidence 94433333 23468888998887665553322222 233433 67777777653345577888988876
Q ss_pred eEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 390 LSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 390 ~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
..........+..+ ..+++..++.+.+.+ ..++++|+.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d--~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 236 ITARIPVGPDPAGIAVTPDGKKVYVALSFX--NTVSVIDTATNTI 278 (391)
T ss_dssp EEEEEECCSSEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEE
T ss_pred EEEEEecCCCccEEEEccCCCEEEEEcCCC--CEEEEEECCCCcE
Confidence 54333333345555 334444444443332 5788899888764
No 220
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.55 E-value=1.5e-12 Score=137.72 Aligned_cols=272 Identities=10% Similarity=0.022 Sum_probs=157.3
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcE
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 167 (729)
..+..+.|+| |+.+|......+..++..+|..+.+ +|+.+.+.... ........++++++.+++....++.+
T Consensus 50 ~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~-~g~~~~~~~~~------~~~~~p~~~~~dg~~l~~~~~~~~~v 122 (361)
T 3scy_A 50 ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE-KGTLHLLNTQK------TMGADPCYLTTNGKNIVTANYSGGSI 122 (361)
T ss_dssp SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT-TTEEEEEEEEE------CSSSCEEEEEECSSEEEEEETTTTEE
T ss_pred CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC-CCcEEEeeEec------cCCCCcEEEEECCCEEEEEECCCCEE
Confidence 4677889999 8888887754334577777887665 22333332110 00111233445555677666667789
Q ss_pred EEEeCCCCCCCCeecCC----CC-C-----CCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcC--CC----
Q 004816 168 YKHSIDSKDSSPLPITP----DY-G-----EPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN--GQ---- 231 (729)
Q Consensus 168 ~~~d~~~~~~~~~~lt~----~~-~-----~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~--~g---- 231 (729)
.+++++.. +....+.. .. + ........++|||||++|++..... ..|++++++ ++
T Consensus 123 ~~~~~~~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--------~~v~v~~~~~~~~~~~~ 193 (361)
T 3scy_A 123 TVFPIGQD-GALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT--------DQIHKFNINPNANADNK 193 (361)
T ss_dssp EEEEBCTT-SCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT--------TEEEEEEECTTCCTTTC
T ss_pred EEEEeCCC-CcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC--------CEEEEEEEcCCCCcccc
Confidence 99998642 33322211 00 0 0011224578999999877664322 345555554 33
Q ss_pred c-eE------Ee-eeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCc
Q 004816 232 N-IQ------VL-VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 303 (729)
Q Consensus 232 ~-~~------~l-t~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~ 303 (729)
+ .. .+ .........++|||||++|++... . ...|.+++++ +|+............. ......+
T Consensus 194 ~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-~------~~~v~v~~~~-~g~~~~~~~~~~~~~~-~~~~~~i 264 (361)
T 3scy_A 194 EKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE-I------GGTVIAFRYA-DGMLDEIQTVAADTVN-AQGSGDI 264 (361)
T ss_dssp CCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET-T------TCEEEEEEEE-TTEEEEEEEEESCSSC-CCCEEEE
T ss_pred cceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC-C------CCeEEEEEec-CCceEEeEEEecCCCC-CCCcccE
Confidence 2 21 11 222233456899999998877652 1 3458999998 6765444333222100 0233578
Q ss_pred eeCCCCcEEEEEecC-CCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEE
Q 004816 304 KWSSKGELFFVTDRK-NGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 382 (729)
Q Consensus 304 ~wspDG~l~~~~~~~-~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~ 382 (729)
+|+|||+.+|+++.. .+...+|.++..+++.+.+..... .. ....+.|.+ +++.|++....++...+|.
T Consensus 265 ~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~-----~~~~~~~sp---dg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 265 HLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GI-----HPRNFIITP---NGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SS-----CCCEEEECT---TSCEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CC-----CCceEEECC---CCCEEEEEECCCCCEEEEE
Confidence 899999955566652 345566666666777665542221 00 112344543 7777777766778889999
Q ss_pred EECCCCceEeecc
Q 004816 383 LDDFGHSLSLLDI 395 (729)
Q Consensus 383 ~d~~~g~~~~lt~ 395 (729)
+|.++|+++.+..
T Consensus 335 ~d~~~g~~~~~~~ 347 (361)
T 3scy_A 335 RDQATGLLTDIKK 347 (361)
T ss_dssp ECTTTCCEEECSC
T ss_pred EECCCCcEeecce
Confidence 9999999877753
No 221
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.54 E-value=3.1e-13 Score=140.41 Aligned_cols=216 Identities=13% Similarity=0.054 Sum_probs=132.2
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|..+++....+ ++.|.||++||.+.+. ..|...+..|++. |.|+++|+||.|.+... . .
T Consensus 29 ~g~~l~y~~~G~----------g~~~~vvllHG~~~~~--~~w~~~~~~L~~~-~~via~Dl~GhG~S~~~----~---~ 88 (318)
T 2psd_A 29 LDSFINYYDSEK----------HAENAVIFLHGNATSS--YLWRHVVPHIEPV-ARCIIPDLIGMGKSGKS----G---N 88 (318)
T ss_dssp TTEEEEEEECCS----------CTTSEEEEECCTTCCG--GGGTTTGGGTTTT-SEEEEECCTTSTTCCCC----T---T
T ss_pred CCeEEEEEEcCC----------CCCCeEEEECCCCCcH--HHHHHHHHHhhhc-CeEEEEeCCCCCCCCCC----C---C
Confidence 788887544321 1236899999985443 4566667777655 79999999987654322 0 1
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccCh----h------HHhhhc--
Q 004816 548 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADL----S------MLRAET-- 614 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~----~------~~~~~~-- 614 (729)
+....+++.+.+..+++.-.+ .+++.|+||||||.+++.++. +|++++++|+.++.... . ......
T Consensus 89 ~~~~~~~~a~dl~~ll~~l~~-~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (318)
T 2psd_A 89 GSYRLLDHYKYLTAWFELLNL-PKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKS 167 (318)
T ss_dssp SCCSHHHHHHHHHHHHTTSCC-CSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHS
T ss_pred CccCHHHHHHHHHHHHHhcCC-CCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhc
Confidence 113356666666666665322 278999999999999999998 99999999997643110 0 000000
Q ss_pred ----------chhhhhhhhhhc-C--Chh---h-----------------hhhcCc----------------ccccCCC-
Q 004816 615 ----------HKFESRYIDNLV-G--SEK---D-----------------YYEKSP----------------INFVDKF- 644 (729)
Q Consensus 615 ----------~~~~~~~~~~~~-~--~~~---~-----------------~~~~sp----------------~~~~~~i- 644 (729)
..+...+..... . ..+ . +....+ ...+.++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 247 (318)
T 2psd_A 168 EEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASD 247 (318)
T ss_dssp THHHHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCT
T ss_pred ccchhhhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhcccc
Confidence 000000000000 0 000 0 000000 0123467
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 645 SCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 645 ~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
++|+|+++|++| .+++ .+.++.+.+. ..+++++ ++||... .+...++.+.+.+|+.+...
T Consensus 248 ~~P~Lvi~G~~D-~~~~-~~~~~~~~~~----~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 307 (318)
T 2psd_A 248 DLPKLFIESDPG-FFSN-AIVEGAKKFP----NTEFVKV-KGLHFLQ-EDAPDEMGKYIKSFVERVLK 307 (318)
T ss_dssp TSCEEEEEEEEC-SSHH-HHHHHHTTSS----SEEEEEE-EESSSGG-GTCHHHHHHHHHHHHHHHHC
T ss_pred CCCeEEEEeccc-cCcH-HHHHHHHhCC----CcEEEEe-cCCCCCH-hhCHHHHHHHHHHHHHHhhc
Confidence 999999999999 8877 6665554442 4678888 6799653 46678899999999988765
No 222
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.53 E-value=2.1e-12 Score=134.60 Aligned_cols=241 Identities=11% Similarity=0.061 Sum_probs=142.9
Q ss_pred eEEEECCEEEEEECCCCcEEEEeCCCCCCCC--eecCCCCCCCceeeec-ceecCCCCEEEEEEeccCCCCCCcceEEEE
Q 004816 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP--LPITPDYGEPLVSYAD-GIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (729)
Q Consensus 149 ~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~--~~lt~~~~~~~~~~~~-~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~ 225 (729)
.|+++++.+++....++.|+++|+.+ ++. +.+... ..... ++|||||++|+ +...... ...|++
T Consensus 46 ~~s~dg~~l~~~~~~~~~i~~~d~~~--~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~-~~~~~~~-----~~~i~v 112 (331)
T 3u4y_A 46 AITSDCSNVVVTSDFCQTLVQIETQL--EPPKVVAIQEG-----QSSMADVDITPDDQFAV-TVTGLNH-----PFNMQS 112 (331)
T ss_dssp EECSSSCEEEEEESTTCEEEEEECSS--SSCEEEEEEEC-----SSCCCCEEECTTSSEEE-ECCCSSS-----SCEEEE
T ss_pred EEcCCCCEEEEEeCCCCeEEEEECCC--CceeEEecccC-----CCCccceEECCCCCEEE-EecCCCC-----cccEEE
Confidence 34445556777777678999999987 553 333332 12244 88999999987 4332211 137999
Q ss_pred EEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeee--EEecCCCCCccccccCc
Q 004816 226 IALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKR--VCVAGFDPTIVESPTEP 303 (729)
Q Consensus 226 ~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~--~~~~~~~~~~~~~~~~~ 303 (729)
+|+++++.............++|||||++|++..... ...|++++++.+|..... ..+.. . .....+
T Consensus 113 ~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~-~----~~~~~~ 181 (331)
T 3u4y_A 113 YSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSS------ANTVRRFKIDADGVLFDTGQEFISG-G----TRPFNI 181 (331)
T ss_dssp EETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETT------TTEEEEEEECTTCCEEEEEEEEECS-S----SSEEEE
T ss_pred EECCCCCeEEEEECCCCccceEECCCCCEEEEEecCC------CceEEEEEECCCCcEeecCCccccC-C----CCccce
Confidence 9999988766555444457889999999988776432 233777887744543222 12221 1 344678
Q ss_pred eeCCCCcEEEEEecCCCceEEEEEEcCCCeE---EEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEE
Q 004816 304 KWSSKGELFFVTDRKNGFWNLHKWIESNNEV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 380 (729)
Q Consensus 304 ~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~---~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~l 380 (729)
.|+|||+.+|++.. +...|.++|+++++. ........... .+.|.+ +++.+|+... +...|
T Consensus 182 ~~spdg~~l~v~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~---------~~~~sp---dg~~l~v~~~--~~~~i 245 (331)
T 3u4y_A 182 TFTPDGNFAFVANL--IGNSIGILETQNPENITLLNAVGTNNLPG---------TIVVSR---DGSTVYVLTE--STVDV 245 (331)
T ss_dssp EECTTSSEEEEEET--TTTEEEEEECSSTTSCEEEEEEECSSCCC---------CEEECT---TSSEEEEECS--SEEEE
T ss_pred EECCCCCEEEEEeC--CCCeEEEEECCCCcccceeeeccCCCCCc---------eEEECC---CCCEEEEEEc--CCCEE
Confidence 99999994444443 234688888888765 32222221222 334443 7776766543 45568
Q ss_pred EEEECCCCceEeecc---C----Ccce---E--EeeeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 381 GILDDFGHSLSLLDI---P----FTDI---D--NITLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 381 y~~d~~~g~~~~lt~---~----~~~v---~--~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
+++|+++++.+.+.. . .... . .++++++.+ ++++.. ...+.++++++..
T Consensus 246 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l-~v~~~~--~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 246 FNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKL-FISANI--SRELKVFTISGKV 306 (331)
T ss_dssp EEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEE-EEEETT--TTEEEEEETTSCE
T ss_pred EEEECCCCceeeecccccccccCCCCcccccceEECCCCCEE-EEecCC--CCcEEEEEecCCc
Confidence 899999888744321 1 1111 1 224455544 444432 2467777876654
No 223
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.52 E-value=4.3e-15 Score=162.71 Aligned_cols=215 Identities=18% Similarity=0.217 Sum_probs=139.1
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccc-cchhhhHHHhhCC-cEEEEecCC-CCCCCchhHHHhhccC
Q 004816 470 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSRG-WAFVDVNYG-GSTGYGREFRERLLGR 546 (729)
Q Consensus 470 ~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~~~~la~~G-~~v~~~d~r-Gs~g~g~~~~~~~~~~ 546 (729)
..+...+|.|... .++.|+||++|||++..... .+....+.|+++| ++|+.+||| |..|++..-... ...
T Consensus 81 dcL~l~v~~P~~~------~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~-~~~ 153 (489)
T 1qe3_A 81 DCLYVNVFAPDTP------SQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFD-EAY 153 (489)
T ss_dssp CCCEEEEEEECSS------CCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTC-TTS
T ss_pred CCCEEEEEeCCCC------CCCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCcccccc-ccC
Confidence 3455567778651 23489999999987533222 2223456777775 999999999 333443211000 011
Q ss_pred CCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHhC---CCcceEEEEeccccChhHHhhhcchhhhh
Q 004816 547 WGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALAF---RDTFKAGASLYGVADLSMLRAETHKFESR 620 (729)
Q Consensus 547 ~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~---~~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 620 (729)
.+.....|+.++++|+.++ ...|++||+|+|+|+||++++.++.. +++|+++|+.+|..++...... ......
T Consensus 154 ~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~-~~~~~~ 232 (489)
T 1qe3_A 154 SDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQA-ASTAAA 232 (489)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHH-HHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHH-HHHHHH
Confidence 2233478999999999875 34689999999999999999888873 5789999999997743322111 011111
Q ss_pred hhhh----------hcC-C-hhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCc
Q 004816 621 YIDN----------LVG-S-EKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQH 688 (729)
Q Consensus 621 ~~~~----------~~~-~-~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH 688 (729)
+... +.. . .+.+...+++.+......|.+++++..|..+.+++..++++..+.+++++.+-..++|+|
T Consensus 233 ~~~~~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~vp~~~g~~~~Eg~ 312 (489)
T 1qe3_A 233 FLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRDEGY 312 (489)
T ss_dssp HHHHHTCCTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTTSCSSCCBCBTTTBCSCHHHHHHTTTTTTCCEEEEEETTGGG
T ss_pred HHHHcCCCHHHHHHHHcCCHHHHHHHHHHhhhccccccCCccceEeECCeecCcCHHHHHhcCCCCCCCEEEeeecchhH
Confidence 1111 000 0 112222222222223345678889999999999999999888888899999999999999
Q ss_pred ccCC
Q 004816 689 GFRK 692 (729)
Q Consensus 689 ~~~~ 692 (729)
.|..
T Consensus 313 ~~~~ 316 (489)
T 1qe3_A 313 LFFT 316 (489)
T ss_dssp GTCC
T ss_pred hhcc
Confidence 8754
No 224
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.52 E-value=8.8e-13 Score=138.63 Aligned_cols=257 Identities=11% Similarity=0.122 Sum_probs=143.7
Q ss_pred EEEECCEEEEEECC--CCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEE
Q 004816 150 FRIFGDTVIFSNYK--DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (729)
Q Consensus 150 ~~~~~~~i~~~~~~--~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~d 227 (729)
|++++ ++++.... ++.|+++++++ ++.+++..... .......++|||||++|++..... ..+.+++
T Consensus 47 ~spdg-~l~~~~~~~~~~~v~~~~~~~--g~~~~~~~~~~-~~~~p~~~a~spdg~~l~~~~~~~--------~~v~v~~ 114 (347)
T 3hfq_A 47 LSAKD-CLYSVDKEDDEGGIAAWQIDG--QTAHKLNTVVA-PGTPPAYVAVDEARQLVYSANYHK--------GTAEVMK 114 (347)
T ss_dssp ECTTC-EEEEEEEETTEEEEEEEEEET--TEEEEEEEEEE-ESCCCSEEEEETTTTEEEEEETTT--------TEEEEEE
T ss_pred EccCC-eEEEEEecCCCceEEEEEecC--CcEEEeeeeec-CCCCCEEEEECCCCCEEEEEeCCC--------CEEEEEE
Confidence 34433 45555542 46899999976 66555543100 012346678999999877665322 3567777
Q ss_pred cC-CCceEEeee----CC--------CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCC
Q 004816 228 LN-GQNIQVLVS----GS--------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDP 294 (729)
Q Consensus 228 l~-~g~~~~lt~----~~--------~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~ 294 (729)
++ +|..+.+.. +. ......+|||||+ |++... ....|++++++.+|++..........
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~-------~~~~v~~~~~~~~g~~~~~~~~~~~~- 185 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDL-------GSDKVYVYNVSDAGQLSEQSVLTMEA- 185 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEET-------TTTEEEEEEECTTSCEEEEEEEECCT-
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeC-------CCCEEEEEEECCCCcEEEeeeEEcCC-
Confidence 74 455544432 11 1234579999999 665542 23468899987446553332222211
Q ss_pred CccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEEeec---cCccccCCcccccCcceeeeeecCCCCEEEE
Q 004816 295 TIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYS---LDAEFSRPLWVFGINSYEIIQSHGEKNLIAC 370 (729)
Q Consensus 295 ~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~---~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~ 370 (729)
. .....++|+|||+ +++.... .+...+|.++..+++.+.+.. ......... ....+.|.+ +++.||+
T Consensus 186 g--~~p~~~~~spdg~~l~v~~~~-~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~i~~sp---dG~~l~v 256 (347)
T 3hfq_A 186 G--FGPRHLVFSPDGQYAFLAGEL-SSQIASLKYDTQTGAFTQLGIVKTIPADYTAHN---GAAAIRLSH---DGHFLYV 256 (347)
T ss_dssp T--CCEEEEEECTTSSEEEEEETT-TTEEEEEEEETTTTEEEEEEEEESSCTTCCSCC---EEEEEEECT---TSCEEEE
T ss_pred C--CCCceEEECCCCCEEEEEeCC-CCEEEEEEecCCCCceEEeeeeeecCCCCCCCC---cceeEEECC---CCCEEEE
Confidence 1 2345679999999 5554444 555566666665677554431 111100000 122345554 7777877
Q ss_pred EEEECCeEEEEEEECCCCceEee---ccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcceeee
Q 004816 371 SYRQNGRSYLGILDDFGHSLSLL---DIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 371 ~s~~~g~~~ly~~d~~~g~~~~l---t~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt 437 (729)
+...++...+|.++. ++..+.+ .........+ ..++++.++.+........+|.+|.++|+++++.
T Consensus 257 ~~~~~~~v~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 257 SNRGYNTLAVFAVTA-DGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EEETTTEEEEEEECG-GGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EeCCCCEEEEEEECC-CCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 776677777776653 3344433 2222234444 3444555566655555556788788888876654
No 225
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.52 E-value=2e-13 Score=140.23 Aligned_cols=221 Identities=15% Similarity=0.069 Sum_probs=136.8
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecC--------CCCCCCchhHHHh
Q 004816 471 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNY--------GGSTGYGREFRER 542 (729)
Q Consensus 471 ~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~--------rGs~g~g~~~~~~ 542 (729)
.+.+.++.|.+ .++.|+||.+||+.. ...+||+++.+|+ +|+.|+|. |...
T Consensus 124 sf~~~i~lP~g-------~~P~Pvii~~~~~~~-------------~~~~G~A~i~f~~~~va~d~~~gsrG~g~-f~~l 182 (433)
T 4g4g_A 124 SFSASIRKPSG-------AGPFPAIIGIGGASI-------------PIPSNVATITFNNDEFGAQMGSGSRGQGK-FYDL 182 (433)
T ss_dssp EEEEEEECCSS-------SCCEEEEEEESCCCS-------------CCCTTSEEEEECHHHHSCCSSGGGTTCSH-HHHH
T ss_pred EEEEEEECCCC-------CCCccEEEEECCCcc-------------ccCCCeEEEEeCCcccccccCCCcCCccc-cccc
Confidence 36889999966 466899999987511 1567999999987 55677787 3322
Q ss_pred h--ccCCCccc--HHHHHHHHHHHHh----CCCCCCCcEEEEEcChHHHHHHHHHhCCCcceEEEEeccccChhHHhh--
Q 004816 543 L--LGRWGIVD--VNDCCSCATFLVG----SGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVADLSMLRA-- 612 (729)
Q Consensus 543 ~--~~~~~~~~--~~D~~~~~~~l~~----~~~~d~~ri~i~G~S~GG~~a~~~~~~~~~~~a~v~~~~~~d~~~~~~-- 612 (729)
. ...|+... ..++..++|||.. +..+|++||+++|||+||..|+++++..++|+++|+.++..+-.....
T Consensus 183 y~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~Ri~~vi~~~sg~~G~~~~R~~ 262 (433)
T 4g4g_A 183 FGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVDRIALTIPQESGAGGAACWRIS 262 (433)
T ss_dssp HCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCTTCSEEEEESCCTTTTSCHHHH
T ss_pred cCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCCceEEEEEecCCCCchhhhhhc
Confidence 2 23465543 3599999999999 789999999999999999999999997779999999986543211110
Q ss_pred --------hcchhhhhhhhhhc--CChhhhh---hcCcccc---cCC-CCCCEEEEEeCCCCCCChHHHHHHHHHH----
Q 004816 613 --------ETHKFESRYIDNLV--GSEKDYY---EKSPINF---VDK-FSCPIILFQGLEDKVVPPDQARKIYKAL---- 671 (729)
Q Consensus 613 --------~~~~~~~~~~~~~~--~~~~~~~---~~sp~~~---~~~-i~~PvL~i~G~~D~~vp~~~~~~~~~~l---- 671 (729)
.............+ .+...|. ..-|+.+ +.- ...|+|++.| +|..++++.....+.++
T Consensus 263 ~~~~~~Ge~v~~~~~~~ge~~Wf~~~f~~y~~~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~p~g~~~a~~aa~~VY 341 (433)
T 4g4g_A 263 DQQKAAGANIQTAAQIITENPWFSRNFDPHVNSITSVPQDHHLLAALIVPRGLAVFEN-NIDWLGPVSTTGCMAAGRLIY 341 (433)
T ss_dssp HHHHHTTCCCCCHHHHTTTCCCSCTTTGGGTTCGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTCHHHHHHHHHHHHHHH
T ss_pred hhhcccCcchhhhhcccCCccccchhhHhhccccccCCcCHHHHHHhhCCceEEEecC-CCCcCCcHHHHHHHHHHHHHH
Confidence 00000000000000 0111111 0112111 111 1368999999 88888886554333332
Q ss_pred HhCC--CCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhCCCCCC
Q 004816 672 KENG--LPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVGHFDVA 717 (729)
Q Consensus 672 ~~~g--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~~~~ 717 (729)
+..| ..+.+...++.+|... ++ +..+.+.+||+++|++....
T Consensus 342 ~~lGa~d~l~~~~~ggH~Hc~f-p~---~~r~~~~~F~~k~Lkg~~~~ 385 (433)
T 4g4g_A 342 KAYGVPNNMGFSLVGGHNHCQF-PS---SQNQDLNSYINYFLLGQGSP 385 (433)
T ss_dssp HHHTCGGGEEEEECCSSCTTCC-CG---GGHHHHHHHHHHHTTCCSCC
T ss_pred HHcCCccceEEEeeCCCCcccC-CH---HHHHHHHHHHHHHhCCCCCC
Confidence 2233 3567766555566421 22 22356778999999866443
No 226
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.52 E-value=3.2e-14 Score=147.46 Aligned_cols=224 Identities=14% Similarity=0.061 Sum_probs=140.9
Q ss_pred CcEEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhh------CCcEEEEecCC
Q 004816 457 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS------RGWAFVDVNYG 530 (729)
Q Consensus 457 ~~~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~------~G~~v~~~d~r 530 (729)
+.+.+++.+...|....++++.|++. .. +.+++|+|+++||.... .......+.+.. .++.||.+++.
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~y--~~-~~~~yPVlylldG~~~f---~~~~~~~~~l~~~~~~~~~~~IvV~i~~~ 84 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEGY--AQ-SLEAYPVVYLLDGEDQF---DHMASLLQFLSQGTMPQIPKVIIVGIHNT 84 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTG--GG-SCCCEEEEEESSHHHHH---HHHHHHHHHHTCSSSCSSCCCEEEEECCS
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCCC--CC-CCCCccEEEEecChhhh---HHHHHHHHHHHhhhhcCCCCEEEEEECCC
Confidence 45677787765688999999999883 32 15789999999995110 011123344443 36888988762
Q ss_pred CCCCCchhHHHhh-------------cc-CCCcccHHHHH--HHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCC
Q 004816 531 GSTGYGREFRERL-------------LG-RWGIVDVNDCC--SCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRD 593 (729)
Q Consensus 531 Gs~g~g~~~~~~~-------------~~-~~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~ 593 (729)
.+.+++.... .. ..+.....+.. .++.++.++..+++.| +|+||||||++++.++. +|+
T Consensus 85 ---~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~ 160 (331)
T 3gff_A 85 ---NRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRP 160 (331)
T ss_dssp ---SHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCS
T ss_pred ---CcccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCch
Confidence 1111111000 00 01111222322 4556666666666555 79999999999999997 999
Q ss_pred cceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCC-------CCChHHHHH
Q 004816 594 TFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDK-------VVPPDQARK 666 (729)
Q Consensus 594 ~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~-------~vp~~~~~~ 666 (729)
.|+++++.+|...+.... + .... .... ........|+++.+|+.|. .++...+.+
T Consensus 161 ~F~~~~~~S~~~w~~~~~-----~----~~~~---~~~~------~~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~ 222 (331)
T 3gff_A 161 LFSAYLALDTSLWFDSPH-----Y----LTLL---EERV------VKGDFKQKQLFMAIANNPLSPGFGVSSYHKDLNLA 222 (331)
T ss_dssp SCSEEEEESCCTTTTTTH-----H----HHHH---HHHH------HHCCCSSEEEEEEECCCSEETTTEECCHHHHHHHH
T ss_pred hhheeeEeCchhcCChHH-----H----HHHH---HHHh------hcccCCCCeEEEEeCCCCCCCccchHHHHHHHHHH
Confidence 999999999976432100 0 0000 0000 1111235799999999998 567788899
Q ss_pred HHHHHHhC---CCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 667 IYKALKEN---GLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 667 ~~~~l~~~---g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
+++.|+.. |+++++.+||+++|+... ...+...++|+-....
T Consensus 223 l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~----~~~~~~~l~~lf~~~~ 267 (331)
T 3gff_A 223 FADKLTKLAPKGLGFMAKYYPEETHQSVS----HIGLYDGIRHLFKDFA 267 (331)
T ss_dssp HHHHHHHHCCTTEEEEEEECTTCCTTTHH----HHHHHHHHHHHHGGGC
T ss_pred HHHHHHhccCCCceEEEEECCCCCccccH----HHHHHHHHHHHHhhcC
Confidence 99999986 678999999999997432 3444555566655544
No 227
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.50 E-value=6.8e-12 Score=136.02 Aligned_cols=293 Identities=7% Similarity=-0.049 Sum_probs=174.6
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEE-CCEEEEEECCCCcE
Q 004816 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF-GDTVIFSNYKDQRL 167 (729)
Q Consensus 89 ~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~l 167 (729)
..+.++.|+|++.+++... .++...+|.... ++....++.. .. .-+........++ ++.++++...++.|
T Consensus 123 ~~~~~~~~s~~~~~~~~~~---~~~~i~~~d~~~---g~~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~~~s~~~d~~v 193 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLL---EDEGMDVLDINS---GQTVRLSPPE-KY--KKKLGFVETISIPEHNELWVSQMQANAV 193 (433)
T ss_dssp SCBCCCEESSSSEEEEEBT---TSSSEEEEETTT---CCEEEECCCH-HH--HTTCCEEEEEEEGGGTEEEEEEGGGTEE
T ss_pred CCceEEEEeCCCeEEEEeC---CCCeEEEEECCC---CeEeeecCcc-cc--cccCCceeEEEEcCCCEEEEEECCCCEE
Confidence 3456889998666776654 345555665432 2333332211 00 0011112233443 44677777778899
Q ss_pred EEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeeee
Q 004816 168 YKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAFP 246 (729)
Q Consensus 168 ~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~ 246 (729)
++||+++ ++. ..+... ......++|+|||+.++++.... ..|+++|+.+++..............
T Consensus 194 ~~~d~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~--------~~i~~~d~~~~~~~~~~~~~~~~~~~ 259 (433)
T 3bws_A 194 HVFDLKT--LAYKATVDLT----GKWSKILLYDPIRDLVYCSNWIS--------EDISVIDRKTKLEIRKTDKIGLPRGL 259 (433)
T ss_dssp EEEETTT--CCEEEEEECS----SSSEEEEEEETTTTEEEEEETTT--------TEEEEEETTTTEEEEECCCCSEEEEE
T ss_pred EEEECCC--ceEEEEEcCC----CCCeeEEEEcCCCCEEEEEecCC--------CcEEEEECCCCcEEEEecCCCCceEE
Confidence 9999987 543 333322 23457788999999876665332 47999999988776655555567788
Q ss_pred eeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceEEE
Q 004816 247 RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLH 325 (729)
Q Consensus 247 ~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~ 325 (729)
+|+|||++|+...............|+++|+. +++... ... .. .....+.|+|||+ +++.... . ..|.
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~-~~~~~~--~~~-~~----~~~~~~~~~~~g~~l~~~~~~-~--~~v~ 328 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMD-KEKLID--TIG-PP----GNKRHIVSGNTENKIYVSDMC-C--SKIE 328 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETT-TTEEEE--EEE-EE----ECEEEEEECSSTTEEEEEETT-T--TEEE
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECC-CCcEEe--ecc-CC----CCcceEEECCCCCEEEEEecC-C--CEEE
Confidence 99999999988775433221124679999998 665422 221 11 2345689999998 6555443 3 4678
Q ss_pred EEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCe------------EEEEEEECCCCceEee
Q 004816 326 KWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR------------SYLGILDDFGHSLSLL 393 (729)
Q Consensus 326 ~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~------------~~ly~~d~~~g~~~~l 393 (729)
++|+++++............. +.|.+ +++.+++.....+. ..|+++|+.+++....
T Consensus 329 v~d~~~~~~~~~~~~~~~~~~---------~~~s~---dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 329 VYDLKEKKVQKSIPVFDKPNT---------IALSP---DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp EEETTTTEEEEEEECSSSEEE---------EEECT---TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred EEECCCCcEEEEecCCCCCCe---------EEEcC---CCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 889888876655433222222 33432 66667766654332 3788899988876655
Q ss_pred ccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcC
Q 004816 394 DIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLD 429 (729)
Q Consensus 394 t~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~ 429 (729)
......+..+ ..+++..++.++..+ ..+++++++
T Consensus 397 ~~~~~~~~~~~~s~dg~~l~~~~~~d--~~i~v~~~~ 431 (433)
T 3bws_A 397 WEAGNQPTGLDVSPDNRYLVISDFLD--HQIRVYRRD 431 (433)
T ss_dssp EECSSSEEEEEECTTSCEEEEEETTT--TEEEEEEET
T ss_pred ecCCCCCceEEEcCCCCEEEEEECCC--CeEEEEEec
Confidence 4444456666 444555555555433 345555543
No 228
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.50 E-value=4.8e-13 Score=136.24 Aligned_cols=247 Identities=14% Similarity=0.141 Sum_probs=148.1
Q ss_pred cEEEEeeccCCCeEEEEEEEcCCCCCCC-CCCCCCCCEEEEEcCCCCCCccccchh-hhHHHhhCCcEEEEecCC--C--
Q 004816 458 PELIEFPTEVPGQKAYAYYYPPSNPIYQ-ASPEEKPPLLVKSHGGPTSEARGILNL-SIQYWTSRGWAFVDVNYG--G-- 531 (729)
Q Consensus 458 ~~~~~~~~~~dG~~l~~~l~~P~~~~~~-~~~~~~~P~vv~~hGg~~~~~~~~~~~-~~~~la~~G~~v~~~d~r--G-- 531 (729)
...+++.+..-|..+...+|.|++.... .++++++|||.++||..+....+.... ..+.+.+.|.+++.++-. +
T Consensus 14 ~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~ 93 (299)
T 4fol_A 14 LIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDE 93 (299)
T ss_dssp EEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTT
T ss_pred EEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceee
Confidence 4566777665788889999999873211 113578999999999854433222122 334556679999998742 1
Q ss_pred -------CCCCc--hhH-HHh------hccCCCcccHHHHHHHHHHHHh----CCCCCCCcEEEEEcChHHHHHHHHHh-
Q 004816 532 -------STGYG--REF-RER------LLGRWGIVDVNDCCSCATFLVG----SGKADEKRLCITGGSAGGYTTLAALA- 590 (729)
Q Consensus 532 -------s~g~g--~~~-~~~------~~~~~~~~~~~D~~~~~~~l~~----~~~~d~~ri~i~G~S~GG~~a~~~~~- 590 (729)
....| ..+ .+. ...++...-.+|+...++.-.. +...+.++.+|.|+||||+-|+.++.
T Consensus 94 ~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~ 173 (299)
T 4fol_A 94 VANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLK 173 (299)
T ss_dssp SCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHH
T ss_pred cCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHh
Confidence 00001 000 000 0011111124455554443221 11234678999999999999999886
Q ss_pred --CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcC-ChhhhhhcCcccccCC---C-CCCEEEEEeCCCCCCChH-
Q 004816 591 --FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVG-SEKDYYEKSPINFVDK---F-SCPIILFQGLEDKVVPPD- 662 (729)
Q Consensus 591 --~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~sp~~~~~~---i-~~PvL~i~G~~D~~vp~~- 662 (729)
+|+++.++.+.+|+.+.......... ....++ +...+...++...+++ . ..++++-+|++|......
T Consensus 174 ~~~~~~~~~~~s~s~~~~p~~~~~~~~~-----~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~D~f~~~~l 248 (299)
T 4fol_A 174 GYSGKRYKSCSAFAPIVNPSNVPWGQKA-----FKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHL 248 (299)
T ss_dssp TGGGTCCSEEEEESCCCCGGGSHHHHHH-----HHHHTC-----CGGGCHHHHGGGSCCCTTCCEEEEEETTCTTHHHHT
T ss_pred CCCCCceEEEEecccccCcccccccccc-----cccccccchhhhhhcCHHHHHHhcccCCCCceEEEecCCCcchhhhc
Confidence 47899999999998876433221111 111222 3445555555444333 2 257999999999874221
Q ss_pred HHHHHHHHHHhCCCC--EEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 663 QARKIYKALKENGLP--VALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 663 ~~~~~~~~l~~~g~~--~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
..+.+.++++++|.+ +++.+.||.+|.+. .+..+++..++|..++|+
T Consensus 249 ~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~---f~~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 249 KPELLLEAVKATSWQDYVEIKKVHGFDHSYY---FVSTFVPEHAEFHARNLG 297 (299)
T ss_dssp CTHHHHHHHTTSTTTTCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCCceEEEEeCCCCCCCHH---HHHHHHHHHHHHHHHhcC
Confidence 236789999988876 78999999899753 355778888999999886
No 229
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.50 E-value=1.3e-13 Score=140.04 Aligned_cols=215 Identities=12% Similarity=0.070 Sum_probs=126.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++++....+ + ...|.||++||.+.+ ...|...+..|+ .+|.|+++|+||.|.+... ...+
T Consensus 12 ~g~~l~y~~~~~-G--------~~~p~vvllHG~~~~--~~~w~~~~~~L~-~~~rvia~DlrGhG~S~~~-----~~~~ 74 (276)
T 2wj6_A 12 FDNKLSYIDNQR-D--------TDGPAILLLPGWCHD--HRVYKYLIQELD-ADFRVIVPNWRGHGLSPSE-----VPDF 74 (276)
T ss_dssp TTEEEEEEECCC-C--------CSSCEEEEECCTTCC--GGGGHHHHHHHT-TTSCEEEECCTTCSSSCCC-----CCCC
T ss_pred CCeEEEEEEecC-C--------CCCCeEEEECCCCCc--HHHHHHHHHHHh-cCCEEEEeCCCCCCCCCCC-----CCCC
Confidence 788887544311 1 123789999998543 345677777776 4699999999986654321 1111
Q ss_pred Cc-ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C-CCcceEEEEeccccC--hhHHhh------hcc-
Q 004816 548 GI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F-RDTFKAGASLYGVAD--LSMLRA------ETH- 615 (729)
Q Consensus 548 ~~-~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~-~~~~~a~v~~~~~~d--~~~~~~------~~~- 615 (729)
.. ...+|+.+.++.| +.+++.++||||||.+++.++. + |++++++|+.++... ...+.. ...
T Consensus 75 ~~~~~a~dl~~ll~~l------~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 148 (276)
T 2wj6_A 75 GYQEQVKDALEILDQL------GVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPER 148 (276)
T ss_dssp CHHHHHHHHHHHHHHH------TCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCTTT
T ss_pred CHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCcch
Confidence 11 1144555555554 3468999999999999999998 8 999999999875321 000000 000
Q ss_pred ------hhhhhhhh---------hhcC-----Chhhh-----------hh-cCcccccCCCCCCEEEEEeCCCCCCC-h-
Q 004816 616 ------KFESRYID---------NLVG-----SEKDY-----------YE-KSPINFVDKFSCPIILFQGLEDKVVP-P- 661 (729)
Q Consensus 616 ------~~~~~~~~---------~~~~-----~~~~~-----------~~-~sp~~~~~~i~~PvL~i~G~~D~~vp-~- 661 (729)
.+...+.. .... ....+ .. .++...+..+++|+|+++|..|...+ +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~ 228 (276)
T 2wj6_A 149 WREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYE 228 (276)
T ss_dssp HHHHHHHHHHHHHTTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHH
T ss_pred HHHHHHHHHHHhhcccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchhHH
Confidence 00000000 0000 00000 00 12233456788999999875443332 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 662 DQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 662 ~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
....++.+.+ ...+++++|++||... .+...++.+.+.+|+.+.
T Consensus 229 ~~~~~~~~~~----p~a~~~~i~~~gH~~~-~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 229 KINSDFAEQH----PWFSYAKLGGPTHFPA-IDVPDRAAVHIREFATAI 272 (276)
T ss_dssp HHHHHHHHHC----TTEEEEECCCSSSCHH-HHSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhC----CCeEEEEeCCCCCccc-ccCHHHHHHHHHHHHhhc
Confidence 2233333332 3579999999999643 356778888999999764
No 230
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.24 E-value=2.1e-15 Score=154.92 Aligned_cols=206 Identities=15% Similarity=0.122 Sum_probs=122.4
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCC-cccHHHHHHHHHHHHhCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWG-IVDVNDCCSCATFLVGSGKADE 570 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~-~~~~~D~~~~~~~l~~~~~~d~ 570 (729)
.|+||++||.+.+ ...|...+..|+ +||.|+++|+||.|.............+. ....+|+.++++++ +.
T Consensus 25 ~p~vv~lHG~~~~--~~~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~l------~~ 95 (304)
T 3b12_A 25 GPALLLLHGFPQN--LHMWARVAPLLA-NEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQRELMRTL------GF 95 (304)
Confidence 4679999998543 345666777777 79999999999765543321000000111 01134555555443 34
Q ss_pred CcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhh----------------------------cchhhhh-
Q 004816 571 KRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAE----------------------------THKFESR- 620 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~----------------------------~~~~~~~- 620 (729)
+++.++|||+||.+++.++. +|++++++|+.++.......... ...+...
T Consensus 96 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
T 3b12_A 96 ERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGC 175 (304)
Confidence 68999999999999999988 89999999999876542111000 0000000
Q ss_pred hhhhhcC-----Ch---h-----------------hhhhc---C----cccccCCCCCCEEEEEeCCCCCC-ChHHHHHH
Q 004816 621 YIDNLVG-----SE---K-----------------DYYEK---S----PINFVDKFSCPIILFQGLEDKVV-PPDQARKI 667 (729)
Q Consensus 621 ~~~~~~~-----~~---~-----------------~~~~~---s----p~~~~~~i~~PvL~i~G~~D~~v-p~~~~~~~ 667 (729)
+...... .. + .+... + ....+.++++|+|+++|++|..+ +......+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~ 255 (304)
T 3b12_A 176 LFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVW 255 (304)
Confidence 0000000 00 0 00000 0 00115678999999999999655 44444444
Q ss_pred HHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 668 YKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 668 ~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
.+.+. .++++++ ++||.+. .+...++.+.+.+||.++..
T Consensus 256 ~~~~~----~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 256 APRLA----NMRFASL-PGGHFFV-DRFPDDTARILREFLSDARS 294 (304)
Confidence 44333 3577788 9999754 35566788889999988754
No 231
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.49 E-value=6e-14 Score=142.87 Aligned_cols=197 Identities=13% Similarity=0.015 Sum_probs=113.4
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
.|.||++||.++. ...|..++..|++ ||.|+++|+||.|. +... .....++++.+.+..+++.. .+.+
T Consensus 51 ~~~lvllHG~~~~--~~~~~~l~~~L~~-~~~v~~~D~~G~G~---S~~~-----~~~~~~~~~a~~~~~~l~~~-~~~~ 118 (280)
T 3qmv_A 51 PLRLVCFPYAGGT--VSAFRGWQERLGD-EVAVVPVQLPGRGL---RLRE-----RPYDTMEPLAEAVADALEEH-RLTH 118 (280)
T ss_dssp SEEEEEECCTTCC--GGGGTTHHHHHCT-TEEEEECCCTTSGG---GTTS-----CCCCSHHHHHHHHHHHHHHT-TCSS
T ss_pred CceEEEECCCCCC--hHHHHHHHHhcCC-CceEEEEeCCCCCC---CCCC-----CCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 4789999997543 4456777888877 99999999997543 2111 11122344443333333321 1347
Q ss_pred cEEEEEcChHHHHHHHHHh-CCCcce----EEEEeccccChhH----Hhhh-cchhhhhhhhhhcC-------C------
Q 004816 572 RLCITGGSAGGYTTLAALA-FRDTFK----AGASLYGVADLSM----LRAE-THKFESRYIDNLVG-------S------ 628 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~-~~~~~~----a~v~~~~~~d~~~----~~~~-~~~~~~~~~~~~~~-------~------ 628 (729)
++.|+|||+||.+|+.++. +|+++. .+++......... .... ...+. ..+....+ +
T Consensus 119 ~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 197 (280)
T 3qmv_A 119 DYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALR-EVIRDLGGLDDADTLGAAYFDR 197 (280)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHH-HHHHHHTCCC---------CCT
T ss_pred CEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHH-HHHHHhCCCChhhhcCHHHHHH
Confidence 8999999999999999987 777665 5555443221000 0000 00000 00000000 0
Q ss_pred --------hhhhhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCC-cccHHHH
Q 004816 629 --------EKDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRK-AENIKFT 699 (729)
Q Consensus 629 --------~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~-~~~~~~~ 699 (729)
......+.+ ..+.++++|+|+++|++|.+++++.+..+.+.+. ..++++++++ ||.+.. .+...+.
T Consensus 198 ~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~~~~~~~~ 272 (280)
T 3qmv_A 198 RLPVLRADLRACERYDW-HPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTT---GSFLRRHLPG-NHFFLNGGPSRDRL 272 (280)
T ss_dssp THHHHHHHHHHHHTCCC-CCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBS---SCEEEEEEEE-ETTGGGSSHHHHHH
T ss_pred HHHHHHHHHHHHHhccc-cCCCceecCeEEEEecCCCCcChHHHHHHHHhcC---CceEEEEecC-CCeEEcCchhHHHH
Confidence 000111111 1246788999999999999999988777665543 3567888875 887543 3445555
Q ss_pred HHHHHHH
Q 004816 700 LEQQMVF 706 (729)
Q Consensus 700 ~~~~~~f 706 (729)
.+.+.+|
T Consensus 273 ~~~i~~~ 279 (280)
T 3qmv_A 273 LAHLGTE 279 (280)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 5555554
No 232
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.49 E-value=5e-12 Score=135.03 Aligned_cols=232 Identities=11% Similarity=0.047 Sum_probs=152.2
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV 235 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~ 235 (729)
.++++...++.|++||+.+ ++....... ......++|+|||++|+++.... ..|+++|+.+++...
T Consensus 3 ~l~vs~~~d~~v~v~d~~~--~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~d--------~~i~v~d~~~~~~~~ 68 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTS--NKVTATIPV----GSNPMGAVISPDGTKVYVANAHS--------NDVSIIDTATNNVIA 68 (391)
T ss_dssp EEEEEETTTTEEEEEETTT--TEEEEEEEC----SSSEEEEEECTTSSEEEEEEGGG--------TEEEEEETTTTEEEE
T ss_pred EEEEEcCCCCEEEEEECCC--CeEEEEeec----CCCcceEEECCCCCEEEEECCCC--------CeEEEEECCCCeEEE
Confidence 4566666778999999987 554433322 12357789999999887665433 579999999988766
Q ss_pred eeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEE
Q 004816 236 LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFV 314 (729)
Q Consensus 236 lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~ 314 (729)
...........+|||||++|++.... ...|+++|+. +++. ...+... ..+..+.|+|||+ +++.
T Consensus 69 ~~~~~~~v~~~~~spdg~~l~~~~~~-------~~~v~v~d~~-~~~~--~~~~~~~-----~~~~~~~~s~dg~~l~~~ 133 (391)
T 1l0q_A 69 TVPAGSSPQGVAVSPDGKQVYVTNMA-------SSTLSVIDTT-SNTV--AGTVKTG-----KSPLGLALSPDGKKLYVT 133 (391)
T ss_dssp EEECSSSEEEEEECTTSSEEEEEETT-------TTEEEEEETT-TTEE--EEEEECS-----SSEEEEEECTTSSEEEEE
T ss_pred EEECCCCccceEECCCCCEEEEEECC-------CCEEEEEECC-CCeE--EEEEeCC-----CCcceEEECCCCCEEEEE
Confidence 65555567788999999999877632 2459999998 6664 3333332 3446789999999 5555
Q ss_pred EecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeec
Q 004816 315 TDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLD 394 (729)
Q Consensus 315 ~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt 394 (729)
... ...|+++|+.+++............ .+.|.+ +++.++++...++ .|+++|+.+++.....
T Consensus 134 ~~~---~~~v~~~d~~~~~~~~~~~~~~~~~---------~~~~~~---dg~~l~~~~~~~~--~v~~~d~~~~~~~~~~ 196 (391)
T 1l0q_A 134 NNG---DKTVSVINTVTKAVINTVSVGRSPK---------GIAVTP---DGTKVYVANFDSM--SISVIDTVTNSVIDTV 196 (391)
T ss_dssp ETT---TTEEEEEETTTTEEEEEEECCSSEE---------EEEECT---TSSEEEEEETTTT--EEEEEETTTTEEEEEE
T ss_pred eCC---CCEEEEEECCCCcEEEEEecCCCcc---------eEEECC---CCCEEEEEeCCCC--EEEEEECCCCeEEEEE
Confidence 433 3478888998887665553322222 233433 6777776665555 4677788887765554
Q ss_pred cCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 395 IPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 395 ~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
.....+..+ ..+++..++..+.......++++|+.+++.
T Consensus 197 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 197 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE
T ss_pred ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE
Confidence 444455555 344444455554333456799999887754
No 233
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.43 E-value=4.3e-12 Score=135.16 Aligned_cols=125 Identities=15% Similarity=0.031 Sum_probs=89.8
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhC---------CcEEEEecC
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSR---------GWAFVDVNY 529 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~---------G~~v~~~d~ 529 (729)
.++.... +|..+++....+.+ ...|.||++||.+++. ..|...+..|++. ||.|+++|+
T Consensus 69 ~~~~~~i--~g~~i~~~~~~~~~--------~~~~plll~HG~~~s~--~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl 136 (388)
T 4i19_A 69 PQFTTEI--DGATIHFLHVRSPE--------PDATPMVITHGWPGTP--VEFLDIIGPLTDPRAHGGDPADAFHLVIPSL 136 (388)
T ss_dssp CEEEEEE--TTEEEEEEEECCSS--------TTCEEEEEECCTTCCG--GGGHHHHHHHHCGGGGTSCGGGCEEEEEECC
T ss_pred CcEEEEE--CCeEEEEEEccCCC--------CCCCeEEEECCCCCCH--HHHHHHHHHHhCcccccCCCCCCeEEEEEcC
Confidence 3444444 79999987776543 2346799999986553 4466677788776 999999999
Q ss_pred CCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccc
Q 004816 530 GGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGV 604 (729)
Q Consensus 530 rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~ 604 (729)
+|.|.+.... . .....+++...+..+++. ++.+++.++|||+||.+++.++. +|++++++++.++.
T Consensus 137 ~G~G~S~~~~-----~--~~~~~~~~a~~~~~l~~~--lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 203 (388)
T 4i19_A 137 PGFGLSGPLK-----S--AGWELGRIAMAWSKLMAS--LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQ 203 (388)
T ss_dssp TTSGGGCCCS-----S--CCCCHHHHHHHHHHHHHH--TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCC
T ss_pred CCCCCCCCCC-----C--CCCCHHHHHHHHHHHHHH--cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCC
Confidence 9755432211 0 123466666666666655 23468999999999999999998 99999999999864
No 234
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.43 E-value=7.7e-12 Score=130.57 Aligned_cols=258 Identities=11% Similarity=0.072 Sum_probs=142.2
Q ss_pred eEEEECCEEEEEECCCCcEEEEeCC--CCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEE
Q 004816 149 AFRIFGDTVIFSNYKDQRLYKHSID--SKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (729)
Q Consensus 149 ~~~~~~~~i~~~~~~~~~l~~~d~~--~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~ 226 (729)
+|+++++.+++....++.|.+|+++ + +..+.+..... ......++|+|||++|++..... ..|+++
T Consensus 44 ~~spdg~~l~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~--------~~i~~~ 111 (343)
T 1ri6_A 44 VVSPDKRYLYVGVRPEFRVLAYRIAPDD--GALTFAAESAL--PGSLTHISTDHQGQFVFVGSYNA--------GNVSVT 111 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTT--CCEEEEEEEEC--SSCCSEEEECTTSSEEEEEETTT--------TEEEEE
T ss_pred EECCCCCEEEEeecCCCeEEEEEecCCC--Cceeecccccc--CCCCcEEEEcCCCCEEEEEecCC--------CeEEEE
Confidence 3444455677766655788888776 5 55444432110 11346788999999877665432 457777
Q ss_pred EcCCC---ceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeE--EecCCCCCcccccc
Q 004816 227 ALNGQ---NIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRV--CVAGFDPTIVESPT 301 (729)
Q Consensus 227 dl~~g---~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~--~~~~~~~~~~~~~~ 301 (729)
+++.+ +..............+|||||++|++.... ...|+++|+..+++..... ...... . ..+.
T Consensus 112 d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~-~--~~~~ 181 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK-------QDRICLFTVSDDGHLVAQDPAEVTTVE-G--AGPR 181 (343)
T ss_dssp EEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG-------GTEEEEEEECTTSCEEEEEEEEEECST-T--CCEE
T ss_pred ECCCCccccccccccCCCCceEEEECCCCCEEEEecCC-------CCEEEEEEecCCCceeeecccccccCC-C--CCcc
Confidence 87433 233333344445678999999998766522 2459999998326653322 222211 1 2345
Q ss_pred CceeCCCCc-EEEEEecCCCceEEEEEEc--CCCeEEEee---ccCccccCCcccccCcceeeeeecCCCCEEEEEEEEC
Q 004816 302 EPKWSSKGE-LFFVTDRKNGFWNLHKWIE--SNNEVLAIY---SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 375 (729)
Q Consensus 302 ~~~wspDG~-l~~~~~~~~g~~~l~~~d~--~~g~~~~l~---~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~ 375 (729)
.+.|+|||+ +++.... .+ .|.+++. .+++.+.+. ..........+ ...+.|.+ +++.++++...+
T Consensus 182 ~~~~~pdg~~l~~~~~~-~~--~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~i~~s~---dg~~l~v~~~~~ 252 (343)
T 1ri6_A 182 HMVFHPNEQYAYCVNEL-NS--SVDVWELKDPHGNIECVQTLDMMPENFSDTRW---AADIHITP---DGRHLYACDRTA 252 (343)
T ss_dssp EEEECTTSSEEEEEETT-TT--EEEEEESSCTTSCCEEEEEEECSCTTCCSCCC---EEEEEECT---TSSEEEEEETTT
T ss_pred eEEECCCCCEEEEEeCC-CC--EEEEEEecCCCCcEEEEeeccccCccccccCC---ccceEECC---CCCEEEEEecCC
Confidence 678999999 5555433 44 4555555 455543322 11111111111 11244443 677777666556
Q ss_pred CeEEEEEEECCCCceEeecc--CCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcceeee
Q 004816 376 GRSYLGILDDFGHSLSLLDI--PFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 376 g~~~ly~~d~~~g~~~~lt~--~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt 437 (729)
+...+|.++.+++..+.+.. ....+..+ ..+++..++.+...+....+|.++.++++.+++.
T Consensus 253 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 253 SLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp TEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred CEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 76667666544665554421 11224444 3444555555554555556777788888765543
No 235
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.43 E-value=7.6e-12 Score=128.07 Aligned_cols=224 Identities=13% Similarity=0.134 Sum_probs=124.7
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchh
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE 538 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~ 538 (729)
+...+.. +|.++++.... ..|.||++||.+.+. ..|......|+ .+|.|+++|+||.|.+...
T Consensus 6 ~~~~~~~--~~~~~~~~~~g------------~g~~~vllHG~~~~~--~~w~~~~~~l~-~~~~vi~~Dl~G~G~s~~~ 68 (291)
T 3qyj_A 6 EQTIVDT--TEARINLVKAG------------HGAPLLLLHGYPQTH--VMWHKIAPLLA-NNFTVVATDLRGYGDSSRP 68 (291)
T ss_dssp EEEEEEC--SSCEEEEEEEC------------CSSEEEEECCTTCCG--GGGTTTHHHHT-TTSEEEEECCTTSTTSCCC
T ss_pred ceeEEec--CCeEEEEEEcC------------CCCeEEEECCCCCCH--HHHHHHHHHHh-CCCEEEEEcCCCCCCCCCC
Confidence 3444444 68888865431 135799999986543 44555666664 5899999999976654322
Q ss_pred HHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhh-----
Q 004816 539 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRA----- 612 (729)
Q Consensus 539 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~----- 612 (729)
. ....+.....+++...+..+++. ...+++.++||||||.+++.++. +|++++++|+.++.........
T Consensus 69 ~---~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~ 143 (291)
T 3qyj_A 69 A---SVPHHINYSKRVMAQDQVEVMSK--LGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEF 143 (291)
T ss_dssp C---CCGGGGGGSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHH
T ss_pred C---CCccccccCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhh
Confidence 1 00000111233333222222222 12468999999999999999998 9999999999864321100000
Q ss_pred -----------hcchh--------hhhhhhhhc----C-----Ch--------------------hhhhhcC-------c
Q 004816 613 -----------ETHKF--------ESRYIDNLV----G-----SE--------------------KDYYEKS-------P 637 (729)
Q Consensus 613 -----------~~~~~--------~~~~~~~~~----~-----~~--------------------~~~~~~s-------p 637 (729)
..... ...+....+ . .+ ..|.... .
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (291)
T 3qyj_A 144 ATAYYHWFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDE 223 (291)
T ss_dssp HHHTTHHHHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred hHHHHHHHHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcc
Confidence 00000 000000000 0 00 0111100 0
Q ss_pred ccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHH
Q 004816 638 INFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 638 ~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 709 (729)
.....++++|+|+++|++|...+... ..+.++..-..++..+++ +||.+ ..+...++.+.+.+||..
T Consensus 224 ~~~~~~i~~P~Lvi~G~~D~~~~~~~---~~~~~~~~~~~~~~~~~~-~GH~~-~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 224 LDMKQKISCPVLVLWGEKGIIGRKYD---VLATWRERAIDVSGQSLP-CGHFL-PEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp TTTTCCBCSCEEEEEETTSSHHHHSC---HHHHHHTTBSSEEEEEES-SSSCH-HHHSHHHHHHHHHHHHHC
T ss_pred hhcCCccccceEEEecccccccchhh---HHHHHHhhcCCcceeecc-CCCCc-hhhCHHHHHHHHHHHHhc
Confidence 11246789999999999996532211 122233333467777886 89954 457778888889999864
No 236
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.42 E-value=3.1e-11 Score=125.56 Aligned_cols=246 Identities=10% Similarity=-0.046 Sum_probs=144.0
Q ss_pred eEEEECCEEEEEECCCCcEEEEeCCCCCCCCe-ecCCCCCC-CceeeecceecCCCCEEEEEEeccCCCCCC---cceEE
Q 004816 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGE-PLVSYADGIFDPRFNRYVTVREDRRQDALN---STTEI 223 (729)
Q Consensus 149 ~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~-~lt~~~~~-~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~---~~~~l 223 (729)
.|+++++.+++....++.|+++|+.+ ++.. .+...... .......++|||||++|++........+.+ ....|
T Consensus 40 ~~s~dg~~l~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i 117 (337)
T 1pby_B 40 MVAPGGRIAYATVNKSESLVKIDLVT--GETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRV 117 (337)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTT--CCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEE
T ss_pred EEcCCCCEEEEEeCCCCeEEEEECCC--CCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceE
Confidence 34444557777777778999999987 5543 34322100 001346788999999987765221100001 12679
Q ss_pred EEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCc
Q 004816 224 VAIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 303 (729)
Q Consensus 224 ~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~ 303 (729)
+++|+++++.............+.|||||++|++.+ ..|+++|++ +++. ...+... ......
T Consensus 118 ~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~----------~~i~~~d~~-~~~~--~~~~~~~-----~~~~~~ 179 (337)
T 1pby_B 118 ALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG----------RDLHVMDPE-AGTL--VEDKPIQ-----SWEAET 179 (337)
T ss_dssp EEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEES----------SSEEEEETT-TTEE--EEEECST-----TTTTTT
T ss_pred EEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeC----------CeEEEEECC-CCcE--eeeeecc-----ccCCCc
Confidence 999999887665544444456788999999988762 239999998 6764 2233222 112345
Q ss_pred eeCCCCc-EEEEEecCCCce---------------------EEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeee
Q 004816 304 KWSSKGE-LFFVTDRKNGFW---------------------NLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQS 361 (729)
Q Consensus 304 ~wspDG~-l~~~~~~~~g~~---------------------~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~ 361 (729)
.|+|||+ +++.... .+.. .|+++|+++++...+...... . ....+.|.+
T Consensus 180 ~~s~dg~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~-----~~~~~~~s~- 250 (337)
T 1pby_B 180 YAQPDVLAVWNQHES-SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD--V-----FYFSTAVNP- 250 (337)
T ss_dssp BCCCBCCCCCCCCTT-TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECS--S-----CEEEEEECT-
T ss_pred eeCCCccEEeeeccC-CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCC--C-----ceeeEEECC-
Confidence 8999998 5544332 2221 688999998877633311100 0 111234443
Q ss_pred cCCCCEEEEEEEECCeEEEEEEECCCCceEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 362 HGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 362 ~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+++.+++. ...|+++|+++++..........+..+ ..+++..++.++. ...++++|+++++.
T Consensus 251 --dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 251 --AKTRAFGA-----YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGA---LGDLAAYDAETLEK 313 (337)
T ss_dssp --TSSEEEEE-----ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESB---SSEEEEEETTTCCE
T ss_pred --CCCEEEEe-----CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcC---CCcEEEEECcCCcE
Confidence 67777665 247888899888754332222233344 3333444444432 46799999988764
No 237
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.41 E-value=5.8e-11 Score=123.55 Aligned_cols=240 Identities=11% Similarity=-0.018 Sum_probs=141.0
Q ss_pred EECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCC
Q 004816 152 IFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ 231 (729)
Q Consensus 152 ~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g 231 (729)
.+.+.++++...++.|.++|+.+ ++........ .... .++|||||++|+++.... ..|+++|++++
T Consensus 7 ~~~~~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~---~~~~-~~~~s~dg~~l~~~~~~~--------~~i~~~d~~~~ 72 (331)
T 3u4y_A 7 TTSNFGIVVEQHLRRISFFSTDT--LEILNQITLG---YDFV-DTAITSDCSNVVVTSDFC--------QTLVQIETQLE 72 (331)
T ss_dssp CCCCEEEEEEGGGTEEEEEETTT--CCEEEEEECC---CCEE-EEEECSSSCEEEEEESTT--------CEEEEEECSSS
T ss_pred CCCCEEEEEecCCCeEEEEeCcc--cceeeeEEcc---CCcc-eEEEcCCCCEEEEEeCCC--------CeEEEEECCCC
Confidence 34456667776778999999987 6554433221 2233 788999999877665532 47999999998
Q ss_pred ce--EEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCC
Q 004816 232 NI--QVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 309 (729)
Q Consensus 232 ~~--~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG 309 (729)
+. +.+..+......++|||||++|+ +. ...+ ....|+++|++ +++. ...+... .....+.|+|||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~-~~~~---~~~~i~v~d~~-~~~~--~~~~~~~-----~~~~~~~~spdg 139 (331)
T 3u4y_A 73 PPKVVAIQEGQSSMADVDITPDDQFAV-TV-TGLN---HPFNMQSYSFL-KNKF--ISTIPIP-----YDAVGIAISPNG 139 (331)
T ss_dssp SCEEEEEEECSSCCCCEEECTTSSEEE-EC-CCSS---SSCEEEEEETT-TTEE--EEEEECC-----TTEEEEEECTTS
T ss_pred ceeEEecccCCCCccceEECCCCCEEE-Ee-cCCC---CcccEEEEECC-CCCe--EEEEECC-----CCccceEECCCC
Confidence 85 34444443333489999999988 44 2211 12279999998 6665 3333332 334678999999
Q ss_pred c-EEEEEecCCCc-eEEEEEEcCCCeEEE----eeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEE
Q 004816 310 E-LFFVTDRKNGF-WNLHKWIESNNEVLA----IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 383 (729)
Q Consensus 310 ~-l~~~~~~~~g~-~~l~~~d~~~g~~~~----l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~ 383 (729)
+ +++.... .+. ..+|.++.. +.... +...... ...+.|.+ +++.+|+....++ .|+++
T Consensus 140 ~~l~~~~~~-~~~~i~~~~~~~~-g~~~~~~~~~~~~~~~---------~~~~~~sp---dg~~l~v~~~~~~--~v~v~ 203 (331)
T 3u4y_A 140 NGLILIDRS-SANTVRRFKIDAD-GVLFDTGQEFISGGTR---------PFNITFTP---DGNFAFVANLIGN--SIGIL 203 (331)
T ss_dssp SCEEEEEET-TTTEEEEEEECTT-CCEEEEEEEEECSSSS---------EEEEEECT---TSSEEEEEETTTT--EEEEE
T ss_pred CEEEEEecC-CCceEEEEEECCC-CcEeecCCccccCCCC---------ccceEECC---CCCEEEEEeCCCC--eEEEE
Confidence 9 6655444 344 455555532 22211 1111111 12344443 6777777665454 46666
Q ss_pred ECCCCce----EeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcceeee
Q 004816 384 DDFGHSL----SLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 384 d~~~g~~----~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt 437 (729)
++++++. ..+..+ ..+..+ ..++++.++.+.. ....++++|+++++.+.+.
T Consensus 204 d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~--~~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 204 ETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE--STVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp ECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS--SEEEEEEEETTTTEEEEEE
T ss_pred ECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc--CCCEEEEEECCCCceeeec
Confidence 7777764 344433 333333 3334444444432 2345899999988765543
No 238
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.41 E-value=7.6e-12 Score=129.76 Aligned_cols=201 Identities=13% Similarity=0.082 Sum_probs=118.1
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhh-CCcEEEEecCCCCCCCchhHHHhhccCCCc-ccHHHHHHHHHHHHhCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGSTGYGREFRERLLGRWGI-VDVNDCCSCATFLVGSGKAD 569 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~-~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~d 569 (729)
.|.||++||++.+ ...|...+..|++ .+|.|+++|+||.|.+...- ...+.. ...+|+.++++.+... +
T Consensus 38 ~p~lvllHG~~~~--~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~----~~~~~~~~~a~dl~~~l~~l~~~--~- 108 (316)
T 3c5v_A 38 GPVLLLLHGGGHS--ALSWAVFTAAIISRVQCRIVALDLRSHGETKVKN----PEDLSAETMAKDVGNVVEAMYGD--L- 108 (316)
T ss_dssp SCEEEEECCTTCC--GGGGHHHHHHHHTTBCCEEEEECCTTSTTCBCSC----TTCCCHHHHHHHHHHHHHHHHTT--C-
T ss_pred CcEEEEECCCCcc--cccHHHHHHHHhhcCCeEEEEecCCCCCCCCCCC----ccccCHHHHHHHHHHHHHHHhcc--C-
Confidence 3789999998533 3456777778876 38999999999876543210 011111 1266777777777432 1
Q ss_pred CCcEEEEEcChHHHHHHHHHh---CCCcceEEEEeccccChh--------HHhhh-cch---hh---hhh----------
Q 004816 570 EKRLCITGGSAGGYTTLAALA---FRDTFKAGASLYGVADLS--------MLRAE-THK---FE---SRY---------- 621 (729)
Q Consensus 570 ~~ri~i~G~S~GG~~a~~~~~---~~~~~~a~v~~~~~~d~~--------~~~~~-~~~---~~---~~~---------- 621 (729)
.+++.|+||||||.+|+.++. +|+ ++++|+.++..... .+... ... .. ...
T Consensus 109 ~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (316)
T 3c5v_A 109 PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLE 187 (316)
T ss_dssp CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHHHHHHTTSCCCHH
T ss_pred CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHHHhhhcccccchh
Confidence 268999999999999999987 365 99999887532110 00000 000 00 000
Q ss_pred -----hhhhc-CCh-----------hhhh-hcCc--------------ccccCCCCCCEEEEEeCCCCCCChHHHHHHHH
Q 004816 622 -----IDNLV-GSE-----------KDYY-EKSP--------------INFVDKFSCPIILFQGLEDKVVPPDQARKIYK 669 (729)
Q Consensus 622 -----~~~~~-~~~-----------~~~~-~~sp--------------~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~ 669 (729)
+.... ... ..+. .... ...+.++++|+|+++|++|.+.+... ..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lli~g~~D~~~~~~~----~~ 263 (316)
T 3c5v_A 188 SARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLT----IG 263 (316)
T ss_dssp HHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHHTTHHHHHHHSSSCEEEEESSCCCCCHHHH----HH
T ss_pred hhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHHHhhcCCCCEEEEEecccccccHHH----HH
Confidence 00000 000 0000 0000 01122578999999999998643221 12
Q ss_pred HHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 670 ALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 670 ~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
.+. ..+++++++++||... .+....+.+.+.+|+.+.
T Consensus 264 ~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 300 (316)
T 3c5v_A 264 QMQ---GKFQMQVLPQCGHAVH-EDAPDKVAEAVATFLIRH 300 (316)
T ss_dssp HHT---TCSEEEECCCCSSCHH-HHSHHHHHHHHHHHHHHT
T ss_pred hhC---CceeEEEcCCCCCccc-ccCHHHHHHHHHHHHHhc
Confidence 222 2358999999999753 345678888999999765
No 239
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=99.40 E-value=4.2e-12 Score=131.65 Aligned_cols=206 Identities=11% Similarity=0.007 Sum_probs=124.3
Q ss_pred CCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCC
Q 004816 491 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 570 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 570 (729)
..|.||++||.........|..++..| ..||.|+.+|++|.+..... ...+ ....+|+.+.++.+. +.
T Consensus 80 ~~~~lv~lhG~~~~~~~~~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~-----~~~~-~~~~~~~~~~l~~~~-----~~ 147 (319)
T 3lcr_A 80 LGPQLILVCPTVMTTGPQVYSRLAEEL-DAGRRVSALVPPGFHGGQAL-----PATL-TVLVRSLADVVQAEV-----AD 147 (319)
T ss_dssp SSCEEEEECCSSTTCSGGGGHHHHHHH-CTTSEEEEEECTTSSTTCCE-----ESSH-HHHHHHHHHHHHHHH-----TT
T ss_pred CCCeEEEECCCCcCCCHHHHHHHHHHh-CCCceEEEeeCCCCCCCCCC-----CCCH-HHHHHHHHHHHHHhc-----CC
Confidence 357899999952233455677778877 78999999999976532111 0000 011333344443332 23
Q ss_pred CcEEEEEcChHHHHHHHHHh-C---CCcceEEEEeccccChhH--Hhhh-cchhhhhhhh-----hhcCC-h------hh
Q 004816 571 KRLCITGGSAGGYTTLAALA-F---RDTFKAGASLYGVADLSM--LRAE-THKFESRYID-----NLVGS-E------KD 631 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~-~---~~~~~a~v~~~~~~d~~~--~~~~-~~~~~~~~~~-----~~~~~-~------~~ 631 (729)
+++.|+|||+||.+++.++. + +++++++|+..+...... .... ...+...... ..... . ..
T Consensus 148 ~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 227 (319)
T 3lcr_A 148 GEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITAQVW 227 (319)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred CCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHH
Confidence 68999999999999999886 4 888999999876532111 0000 0000000000 00000 0 01
Q ss_pred hhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHh
Q 004816 632 YYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVV 711 (729)
Q Consensus 632 ~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 711 (729)
+...........+++|+|+++|++ ..+++.....+.+.+.. .++++++++..|.+..+++..+..+.+.+||.+..
T Consensus 228 ~~~~~~~~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~---~~~~~~~~g~H~~~~~~~~~~~va~~i~~fL~~~~ 303 (319)
T 3lcr_A 228 CLELLRGWRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAA---MGQVVEAPGDHFTIIEGEHVASTAHIVGDWLREAH 303 (319)
T ss_dssp HHHHTTTCCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHHT---CSEEEEESSCTTGGGSTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCCC---CceEEEeCCCcHHhhCcccHHHHHHHHHHHHHhcc
Confidence 111111122367899999999988 56666677777777663 45888888754444444678899999999999876
Q ss_pred C
Q 004816 712 G 712 (729)
Q Consensus 712 ~ 712 (729)
.
T Consensus 304 ~ 304 (319)
T 3lcr_A 304 A 304 (319)
T ss_dssp C
T ss_pred c
Confidence 5
No 240
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.38 E-value=3.4e-11 Score=125.63 Aligned_cols=264 Identities=6% Similarity=-0.012 Sum_probs=148.2
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcE
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 167 (729)
..+..+.|+| |+.+|+... +.++..+|..+..+ ++.+.+.... .. .......|+++++.+++....++.|
T Consensus 38 ~~~~~~~~spdg~~l~~~~~---~~~~v~~~~~~~~~-~~~~~~~~~~--~~---~~~~~~~~s~dg~~l~~~~~~~~~i 108 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVR---PEFRVLAYRIAPDD-GALTFAAESA--LP---GSLTHISTDHQGQFVFVGSYNAGNV 108 (343)
T ss_dssp SCCCCEEECTTSSEEEEEET---TTTEEEEEEECTTT-CCEEEEEEEE--CS---SCCSEEEECTTSSEEEEEETTTTEE
T ss_pred CCCceEEECCCCCEEEEeec---CCCeEEEEEecCCC-Cceeeccccc--cC---CCCcEEEEcCCCCEEEEEecCCCeE
Confidence 3567899999 777877764 23677777776431 2333221100 00 0111223334455677776667789
Q ss_pred EEEeCCCCC-CCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCC-CceEEee-----e-C
Q 004816 168 YKHSIDSKD-SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-QNIQVLV-----S-G 239 (729)
Q Consensus 168 ~~~d~~~~~-~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~-g~~~~lt-----~-~ 239 (729)
+++++..+. .+....... ......++|+|||++|+...... ..|+++++.+ ++...+. . .
T Consensus 109 ~~~d~~~~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~--------~~v~~~d~~~~~~~~~~~~~~~~~~~ 176 (343)
T 1ri6_A 109 SVTRLEDGLPVGVVDVVEG----LDGCHSANISPDNRTLWVPALKQ--------DRICLFTVSDDGHLVAQDPAEVTTVE 176 (343)
T ss_dssp EEEEEETTEEEEEEEEECC----CTTBCCCEECTTSSEEEEEEGGG--------TEEEEEEECTTSCEEEEEEEEEECST
T ss_pred EEEECCCCccccccccccC----CCCceEEEECCCCCEEEEecCCC--------CEEEEEEecCCCceeeecccccccCC
Confidence 999884200 122222222 12356788999999876554222 4689999887 6654322 1 1
Q ss_pred CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecC-CCCeeeeEEecCCCCCc--cccccCceeCCCCcEEEEEe
Q 004816 240 SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE-NGDVYKRVCVAGFDPTI--VESPTEPKWSSKGELFFVTD 316 (729)
Q Consensus 240 ~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~-~g~~~~~~~~~~~~~~~--~~~~~~~~wspDG~l~~~~~ 316 (729)
.......+|+|||++|++.... ...|.+++++. +++.............. ......+.|+|||+.+|++.
T Consensus 177 ~~~~~~~~~~pdg~~l~~~~~~-------~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~ 249 (343)
T 1ri6_A 177 GAGPRHMVFHPNEQYAYCVNEL-------NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD 249 (343)
T ss_dssp TCCEEEEEECTTSSEEEEEETT-------TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE
T ss_pred CCCcceEEECCCCCEEEEEeCC-------CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe
Confidence 2234567899999988877622 34588888851 35443222222111000 01233588999999444444
Q ss_pred cCCCceEEEEEEcC--CCeEEEeec--cCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEe
Q 004816 317 RKNGFWNLHKWIES--NNEVLAIYS--LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSL 392 (729)
Q Consensus 317 ~~~g~~~l~~~d~~--~g~~~~l~~--~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~ 392 (729)
...+ .|.+++++ +++.+.+.. ...... .+.|.+ +++.+++....++...+|.++.++|+++.
T Consensus 250 ~~~~--~i~v~d~~~~~~~~~~~~~~~~~~~~~---------~~~~s~---dg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 315 (343)
T 1ri6_A 250 RTAS--LITVFSVSEDGSVLSKEGFQPTETQPR---------GFNVDH---SGKYLIAAGQKSHHISVYEIVGEQGLLHE 315 (343)
T ss_dssp TTTT--EEEEEEECTTSCCEEEEEEEECSSSCC---------CEEECT---TSSEEEEECTTTCEEEEEEEETTTTEEEE
T ss_pred cCCC--EEEEEEEcCCCCceEEeeeecCCCccc---------eEEECC---CCCEEEEecCCCCeEEEEEEcCCCceeeE
Confidence 3134 45555554 555554431 111122 334443 67777776666788899999998887765
Q ss_pred ec
Q 004816 393 LD 394 (729)
Q Consensus 393 lt 394 (729)
+.
T Consensus 316 ~~ 317 (343)
T 1ri6_A 316 KG 317 (343)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 241
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.38 E-value=7.3e-11 Score=127.86 Aligned_cols=240 Identities=10% Similarity=0.029 Sum_probs=150.9
Q ss_pred CCEEEEEECCCCcEEEEeCCCCCCCCeecCCCC--CCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCC
Q 004816 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDY--GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ 231 (729)
Q Consensus 154 ~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~--~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g 231 (729)
++.+++....++.|++||+.+ ++..+..... ......+...+|+|+|+.++ +.... ..|+++|++++
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-s~~~d--------~~v~~~d~~~~ 201 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINS--GQTVRLSPPEKYKKKLGFVETISIPEHNELWV-SQMQA--------NAVHVFDLKTL 201 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTT--CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEE-EEGGG--------TEEEEEETTTC
T ss_pred CCeEEEEeCCCCeEEEEECCC--CeEeeecCcccccccCCceeEEEEcCCCEEEE-EECCC--------CEEEEEECCCc
Confidence 567888877777899999987 6555433210 00123567788999998544 33322 57999999987
Q ss_pred ceEEe-eeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc
Q 004816 232 NIQVL-VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 310 (729)
Q Consensus 232 ~~~~l-t~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~ 310 (729)
+.... ..........+|+|||++|++.... ...|+++|+. +++. ...+... ..+..+.|+|||+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~i~~~d~~-~~~~--~~~~~~~-----~~~~~~~~~~~g~ 266 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWI-------SEDISVIDRK-TKLE--IRKTDKI-----GLPRGLLLSKDGK 266 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEEEEETT-------TTEEEEEETT-TTEE--EEECCCC-----SEEEEEEECTTSS
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEEEEecC-------CCcEEEEECC-CCcE--EEEecCC-----CCceEEEEcCCCC
Confidence 76543 3334456778999999988766622 2469999998 6654 3333332 3456789999998
Q ss_pred -EEEEEecCC----CceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEEC
Q 004816 311 -LFFVTDRKN----GFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 385 (729)
Q Consensus 311 -l~~~~~~~~----g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~ 385 (729)
+++...... ....|+++|+.+++...............|.+ +++.++++...++ .|+++++
T Consensus 267 ~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~------------~g~~l~~~~~~~~--~v~v~d~ 332 (433)
T 3bws_A 267 ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGN------------TENKIYVSDMCCS--KIEVYDL 332 (433)
T ss_dssp EEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECS------------STTEEEEEETTTT--EEEEEET
T ss_pred EEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECC------------CCCEEEEEecCCC--EEEEEEC
Confidence 555554311 24579999998887665543222222233332 6777877766666 4566688
Q ss_pred CCCceEeeccCCcceEEe-eeeCCEEEEEEeCCCCC------------ceEEEEEcCCCcc
Q 004816 386 FGHSLSLLDIPFTDIDNI-TLGNDCLFVEGASGVEP------------SSVAKVTLDDHKL 433 (729)
Q Consensus 386 ~~g~~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~------------~~ly~~d~~~~~~ 433 (729)
++++..........+..+ ..+++..++........ ..++++|+.+++.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~ 393 (433)
T 3bws_A 333 KEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV 393 (433)
T ss_dssp TTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE
T ss_pred CCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcE
Confidence 777655443344455566 44444445555443332 4799999888764
No 242
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.37 E-value=9.9e-11 Score=122.78 Aligned_cols=239 Identities=8% Similarity=-0.001 Sum_probs=142.8
Q ss_pred ECCEEEEEECC------CCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEE
Q 004816 153 FGDTVIFSNYK------DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (729)
Q Consensus 153 ~~~~i~~~~~~------~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~ 226 (729)
+++.+++.... ++.|+++|+.+ ++....... ......+.|+|||+++++..... ..|+++
T Consensus 51 dg~~l~~~~~~~~~~~~~~~v~~~d~~~--~~~~~~~~~----~~~~~~~~~s~dg~~l~v~~~~~--------~~v~~~ 116 (353)
T 3vgz_A 51 QENALWLATSQSRKLDKGGVVYRLDPVT--LEVTQAIHN----DLKPFGATINNTTQTLWFGNTVN--------SAVTAI 116 (353)
T ss_dssp TTTEEEEEECCCTTTEESEEEEEECTTT--CCEEEEEEE----SSCCCSEEEETTTTEEEEEETTT--------TEEEEE
T ss_pred CCCEEEEEcCCCcCCCCCccEEEEcCCC--CeEEEEEec----CCCcceEEECCCCCEEEEEecCC--------CEEEEE
Confidence 34455555433 45899999987 554333222 12246788999999876665432 579999
Q ss_pred EcCCCceEEeeeC-CC---------eeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCc
Q 004816 227 ALNGQNIQVLVSG-SD---------FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTI 296 (729)
Q Consensus 227 dl~~g~~~~lt~~-~~---------~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~ 296 (729)
|+++++....... .. ......|||||++|++..... ...|+++|++ +++. ...+....
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~~i~~~d~~-~~~~--~~~~~~~~--- 184 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK------ESVIWVVDGG-NIKL--KTAIQNTG--- 184 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS------SCEEEEEETT-TTEE--EEEECCCC---
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC------CceEEEEcCC-CCce--EEEecCCC---
Confidence 9999887544332 11 135679999999987776332 3469999988 6664 33333222
Q ss_pred cccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECC
Q 004816 297 VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 376 (729)
Q Consensus 297 ~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g 376 (729)
.....+.|+|||+.+|+... ...|+++|+.+++.......... .+. .....+.|.+ +++.+|+... +
T Consensus 185 -~~~~~~~~s~dg~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~--~~~--~~~~~~~~s~---dg~~l~~~~~--~ 251 (353)
T 3vgz_A 185 -KMSTGLALDSEGKRLYTTNA---DGELITIDTADNKILSRKKLLDD--GKE--HFFINISLDT---ARQRAFITDS--K 251 (353)
T ss_dssp -TTCCCCEEETTTTEEEEECT---TSEEEEEETTTTEEEEEEECCCS--SSC--CCEEEEEEET---TTTEEEEEES--S
T ss_pred -CccceEEECCCCCEEEEEcC---CCeEEEEECCCCeEEEEEEcCCC--CCC--cccceEEECC---CCCEEEEEeC--C
Confidence 34567899999994444443 24688899998876654422100 000 0011234443 7777776653 3
Q ss_pred eEEEEEEECCCCceE-eeccCCcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 377 RSYLGILDDFGHSLS-LLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 377 ~~~ly~~d~~~g~~~-~lt~~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
...|+++|+++++.. .+..+......++++++.+++ +... ...++++|+.+++.
T Consensus 252 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v-~~~~--~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 252 AAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYV-THRQ--AGKVSVIDAKSYKV 306 (353)
T ss_dssp SSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEE-EETT--TTEEEEEETTTTEE
T ss_pred CCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEE-EECC--CCeEEEEECCCCeE
Confidence 346888899887754 333333221222445555444 4322 24788999887764
No 243
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.37 E-value=5.9e-11 Score=124.54 Aligned_cols=270 Identities=9% Similarity=0.008 Sum_probs=143.6
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcE
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 167 (729)
..+..+.|+| |+ +|.+.... +.++..+|.. . +++.+.+.... .........+|+++++.+++....++.+
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~-~~~~v~~~~~--~-~g~~~~~~~~~----~~~~~p~~~a~spdg~~l~~~~~~~~~v 110 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKED-DEGGIAAWQI--D-GQTAHKLNTVV----APGTPPAYVAVDEARQLVYSANYHKGTA 110 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEET-TEEEEEEEEE--E-TTEEEEEEEEE----EESCCCSEEEEETTTTEEEEEETTTTEE
T ss_pred CCcceEEEccCCe-EEEEEecC-CCceEEEEEe--c-CCcEEEeeeee----cCCCCCEEEEECCCCCEEEEEeCCCCEE
Confidence 4667899999 66 87776532 2345445544 3 12333332100 0000111223444455677776667788
Q ss_pred EEEeCCCCCCCCeecCCC---CCC-----CceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcC-CCceEEeee
Q 004816 168 YKHSIDSKDSSPLPITPD---YGE-----PLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN-GQNIQVLVS 238 (729)
Q Consensus 168 ~~~d~~~~~~~~~~lt~~---~~~-----~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~-~g~~~~lt~ 238 (729)
.+++++.. +..+.+... ... .......++|||||+ +++. ... ...|++++++ +|+...+..
T Consensus 111 ~v~~~~~~-g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~-~~~-------~~~v~~~~~~~~g~~~~~~~ 180 (347)
T 3hfq_A 111 EVMKIAAD-GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVI-DLG-------SDKVYVYNVSDAGQLSEQSV 180 (347)
T ss_dssp EEEEECTT-SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEE-ETT-------TTEEEEEEECTTSCEEEEEE
T ss_pred EEEEeCCC-CCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEE-eCC-------CCEEEEEEECCCCcEEEeee
Confidence 88887531 444433211 000 011245678999999 5444 322 1468888887 566554421
Q ss_pred ----CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecC-CCCeeeeEEecCCCCCcc--ccccCceeCCCCc-
Q 004816 239 ----GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE-NGDVYKRVCVAGFDPTIV--ESPTEPKWSSKGE- 310 (729)
Q Consensus 239 ----~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~-~g~~~~~~~~~~~~~~~~--~~~~~~~wspDG~- 310 (729)
........+|||||++|++.... ...+.+++++. +|+.............+. .....++|+|||+
T Consensus 181 ~~~~~g~~p~~~~~spdg~~l~v~~~~-------~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 181 LTMEAGFGPRHLVFSPDGQYAFLAGEL-------SSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETT-------TTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred EEcCCCCCCceEEECCCCCEEEEEeCC-------CCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 11133457999999988876522 23477777662 355433333322210000 1244588999999
Q ss_pred EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce
Q 004816 311 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 390 (729)
Q Consensus 311 l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~ 390 (729)
||+.... .+.-.+|.++. +++.+.+........ ....+.|.+ +++.|++....++...||.++.++|++
T Consensus 254 l~v~~~~-~~~v~v~~~~~-~g~~~~~~~~~~~~~------~~~~~~~sp---dg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 254 LYVSNRG-YNTLAVFAVTA-DGHLTLIQQISTEGD------FPRDFDLDP---TEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EEEEEET-TTEEEEEEECG-GGCEEEEEEEECSSS------CCCEEEECT---TSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEeCC-CCEEEEEEECC-CCcEEEeEEEecCCC------CcCeEEECC---CCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 5544433 44444444432 344444332111000 112344543 777777776667888899999999988
Q ss_pred Eeecc
Q 004816 391 SLLDI 395 (729)
Q Consensus 391 ~~lt~ 395 (729)
+.+..
T Consensus 323 ~~~~~ 327 (347)
T 3hfq_A 323 SLLQK 327 (347)
T ss_dssp EEEEE
T ss_pred Eeccc
Confidence 76653
No 244
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.37 E-value=5.2e-13 Score=136.67 Aligned_cols=143 Identities=16% Similarity=0.169 Sum_probs=98.9
Q ss_pred CCCCCCCcEEEEEcChHHHHHHHHHh-CCCcce-EEEEeccccChhHHhhhcchhhhhhhhhhcC---C----hhhhhhc
Q 004816 565 SGKADEKRLCITGGSAGGYTTLAALA-FRDTFK-AGASLYGVADLSMLRAETHKFESRYIDNLVG---S----EKDYYEK 635 (729)
Q Consensus 565 ~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~-a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~ 635 (729)
+..+|++||+|+|+|+||++++.++. +|++|+ +++++++.......... ....+...+. . .+.+..
T Consensus 5 ~~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- 79 (318)
T 2d81_A 5 AFNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY----YTSCMYNGYPSITTPTANMKSWSG- 79 (318)
T ss_dssp CCCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC----GGGGSTTCCCCCHHHHHHHHHHBT-
T ss_pred hcCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHH----HHHHhhccCCCCCCHHHHHHHhhc-
Confidence 44689999999999999999998887 999999 87777653211000000 0000000000 0 011111
Q ss_pred CcccccCCCC-CCEEEEEeCCCCCCChHHHHHHHHHHHhCCC--CEEEEEECCCCcccCCccc-----------------
Q 004816 636 SPINFVDKFS-CPIILFQGLEDKVVPPDQARKIYKALKENGL--PVALVEYEGEQHGFRKAEN----------------- 695 (729)
Q Consensus 636 sp~~~~~~i~-~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~--~~~~~~~~~~gH~~~~~~~----------------- 695 (729)
+++..+.+++ .|+|++||++|.+||++++++++++|++.+. +++++++++++|.+.....
T Consensus 80 ~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~ 159 (318)
T 2d81_A 80 NQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISN 159 (318)
T ss_dssp TTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEE
T ss_pred ccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccC
Confidence 4555555554 6899999999999999999999999999883 7999999999999743321
Q ss_pred -HHHHHHHHHHHHHHHhC
Q 004816 696 -IKFTLEQQMVFFARVVG 712 (729)
Q Consensus 696 -~~~~~~~~~~fl~~~l~ 712 (729)
.......|++||...+.
T Consensus 160 ~~~d~~~~i~~ff~g~~~ 177 (318)
T 2d81_A 160 CNYDGAGAALKWIYGSLN 177 (318)
T ss_dssp CSSCHHHHHHHHHHSSCC
T ss_pred CCChHHHHHHHHHhccCC
Confidence 24667789999987665
No 245
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.34 E-value=7.3e-11 Score=122.75 Aligned_cols=233 Identities=10% Similarity=-0.003 Sum_probs=138.8
Q ss_pred EEEEECCCCcEEEEeCCCCCCCCee-cCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE
Q 004816 157 VIFSNYKDQRLYKHSIDSKDSSPLP-ITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV 235 (729)
Q Consensus 157 i~~~~~~~~~l~~~d~~~~~~~~~~-lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~ 235 (729)
++++...++.|+++|+.+ ++... +..... ......++|||||++++++.... ..|+++|+.+++...
T Consensus 3 ~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~--------~~v~~~d~~~~~~~~ 70 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEK--MAVDKVITIADA--GPTPMVPMVAPGGRIAYATVNKS--------ESLVKIDLVTGETLG 70 (337)
T ss_dssp EEEEEETTTEEEEEETTT--TEEEEEEECTTC--TTCCCCEEECTTSSEEEEEETTT--------TEEEEEETTTCCEEE
T ss_pred EEEEcCCCCeEEEEECCC--CcEEEEEEcCCC--CCCccceEEcCCCCEEEEEeCCC--------CeEEEEECCCCCeEe
Confidence 456666778999999987 54433 332210 00346788999999877665432 579999999887654
Q ss_pred eeeCCC------eeeeeeeCCCCCeEEEEEecCC-CCCC---CCcEEEEEEecCCCCeeeeEEecCCCCCccccccCcee
Q 004816 236 LVSGSD------FYAFPRMDPRGERMAWIEWHHP-NMPW---DKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 305 (729)
Q Consensus 236 lt~~~~------~~~~~~~SPDG~~la~~~~~~~-~~~~---~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~w 305 (729)
...... ....++|||||++|++...... ...+ ....|+++|++ +++. ...+... ..+..+.|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~-~~~~--~~~~~~~-----~~~~~~~~ 142 (337)
T 1pby_B 71 RIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE-TLSR--RKAFEAP-----RQITMLAW 142 (337)
T ss_dssp EEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT-TTEE--EEEEECC-----SSCCCEEE
T ss_pred eEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECC-CCcE--EEEEeCC-----CCcceeEE
Confidence 333211 3456799999999988752100 0001 13679999998 6654 2233222 33467889
Q ss_pred CCCCc-EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCe-------
Q 004816 306 SSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR------- 377 (729)
Q Consensus 306 spDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~------- 377 (729)
+|||+ +++. + ..|+++|+++++...............|++ +++.+++.....+.
T Consensus 143 s~dg~~l~~~-~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~------------dg~~l~~~~~~~~~~~~~~~~ 204 (337)
T 1pby_B 143 ARDGSKLYGL-G-----RDLHVMDPEAGTLVEDKPIQSWEAETYAQP------------DVLAVWNQHESSGVMATPFYT 204 (337)
T ss_dssp CTTSSCEEEE-S-----SSEEEEETTTTEEEEEECSTTTTTTTBCCC------------BCCCCCCCCTTTTEEEEEEEE
T ss_pred CCCCCEEEEe-C-----CeEEEEECCCCcEeeeeeccccCCCceeCC------------CccEEeeeccCCCceeeeeec
Confidence 99999 6655 2 358899999887765443222112234444 33333332221111
Q ss_pred --------------EEEEEEECCCCceEeeccC--CcceEEe--eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 378 --------------SYLGILDDFGHSLSLLDIP--FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 378 --------------~~ly~~d~~~g~~~~lt~~--~~~v~~~--~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
..|+++|+++++...+... ...+..+ +++++.+ +.. ...++++|+++++.
T Consensus 205 ~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l-~~~-----~~~v~~~d~~~~~~ 272 (337)
T 1pby_B 205 ARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA-FGA-----YNVLESFDLEKNAS 272 (337)
T ss_dssp EBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEE-EEE-----ESEEEEEETTTTEE
T ss_pred cccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEE-EEe-----CCeEEEEECCCCcC
Confidence 2689999999887644322 2233344 4444444 444 25799999988764
No 246
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.32 E-value=1.1e-10 Score=123.39 Aligned_cols=287 Identities=10% Similarity=0.024 Sum_probs=148.8
Q ss_pred CCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECC---CCcEEE--EeCCCCCCCCeecCCC
Q 004816 111 EAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYK---DQRLYK--HSIDSKDSSPLPITPD 185 (729)
Q Consensus 111 ~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~--~d~~~~~~~~~~lt~~ 185 (729)
+.+...+|.++.. +|+.+.+.... .......+|+++++.|++.... .+.|.+ ++.++ ++.+++...
T Consensus 25 ~~~~i~~~~~d~~-~g~~~~~~~~~------~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~--g~~~~~~~~ 95 (361)
T 3scy_A 25 NSKGIYTFRFNEE-TGESLPLSDAE------VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK--GTLHLLNTQ 95 (361)
T ss_dssp SCCEEEEEEEETT-TCCEEEEEEEE------CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT--TEEEEEEEE
T ss_pred CCCCEEEEEEeCC-CCCEEEeeccc------CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC--CcEEEeeEe
Confidence 4556667777665 23333332110 0111223444455567666653 355644 45444 555555432
Q ss_pred CCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCC-CceEEe---e--eCCC---------eeeeeeeCC
Q 004816 186 YGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-QNIQVL---V--SGSD---------FYAFPRMDP 250 (729)
Q Consensus 186 ~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~-g~~~~l---t--~~~~---------~~~~~~~SP 250 (729)
... .......++ ||++|+...... ..|.+++++. +....+ . .+.+ .....+|||
T Consensus 96 ~~~-~~~p~~~~~--dg~~l~~~~~~~--------~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp 164 (361)
T 3scy_A 96 KTM-GADPCYLTT--NGKNIVTANYSG--------GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP 164 (361)
T ss_dssp ECS-SSCEEEEEE--CSSEEEEEETTT--------TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT
T ss_pred ccC-CCCcEEEEE--CCCEEEEEECCC--------CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC
Confidence 100 112233344 999876554322 4677888764 322221 1 1111 124579999
Q ss_pred CCCeEEEEEecCCCCCCCCcEEEEEEecCCC-----C-eeee----EEecCCCCCccccccCceeCCCCcEEEEEecCCC
Q 004816 251 RGERMAWIEWHHPNMPWDKAELWVGYISENG-----D-VYKR----VCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNG 320 (729)
Q Consensus 251 DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g-----~-~~~~----~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g 320 (729)
||++|++.... ...|++++++..+ + +... ....... .....+.|+|||+.+|+... .
T Consensus 165 dg~~l~~~~~~-------~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~spdg~~l~v~~~--~ 231 (361)
T 3scy_A 165 DGKYLLADDLG-------TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPG----SGPRHLIFNSDGKFAYLINE--I 231 (361)
T ss_dssp TSSEEEEEETT-------TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTT----CCEEEEEECTTSSEEEEEET--T
T ss_pred CCCEEEEEeCC-------CCEEEEEEEcCCCCcccccceeecccccceecCCC----CCCeEEEEcCCCCEEEEEcC--C
Confidence 99999877632 2457788776322 2 2111 1112222 34457899999994444443 2
Q ss_pred ceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEE-CCeEEEEEEECCCCceEeeccC--C
Q 004816 321 FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ-NGRSYLGILDDFGHSLSLLDIP--F 397 (729)
Q Consensus 321 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~-~g~~~ly~~d~~~g~~~~lt~~--~ 397 (729)
...|.++++++++.+.+......... ......+.|.+ +++.||++... ++...||.++.++++.+.+..- .
T Consensus 232 ~~~v~v~~~~~g~~~~~~~~~~~~~~---~~~~~~i~~sp---dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g 305 (361)
T 3scy_A 232 GGTVIAFRYADGMLDEIQTVAADTVN---AQGSGDIHLSP---DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTG 305 (361)
T ss_dssp TCEEEEEEEETTEEEEEEEEESCSSC---CCCEEEEEECT---TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECS
T ss_pred CCeEEEEEecCCceEEeEEEecCCCC---CCCcccEEECC---CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCC
Confidence 23566677777776554421110000 00112445554 77777766555 5777888887777776554321 2
Q ss_pred cceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcceee
Q 004816 398 TDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAV 436 (729)
Q Consensus 398 ~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~l 436 (729)
.....+ ..+++++++.++..+....+|.+|.++++++.+
T Consensus 306 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 306 IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 233444 444555566666555555678888888876543
No 247
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.32 E-value=2.9e-12 Score=128.30 Aligned_cols=210 Identities=10% Similarity=-0.048 Sum_probs=124.8
Q ss_pred CEEEEEcCCCCCCccccchhhhHHHhhCCcE---E----------EEecCCCCCCCchhHHHhh--ccCCC-cccHHHHH
Q 004816 493 PLLVKSHGGPTSEARGILNLSIQYWTSRGWA---F----------VDVNYGGSTGYGREFRERL--LGRWG-IVDVNDCC 556 (729)
Q Consensus 493 P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~---v----------~~~d~rGs~g~g~~~~~~~--~~~~~-~~~~~D~~ 556 (729)
+.||++||...+ ...|..+++.|+++|+. + +.+|-++.+..+....... ..... ....+|+.
T Consensus 4 ~pvvllHG~~~~--~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 4 IPIILIHGSGGN--ASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCEEEECCTTCC--TTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCEEEECCCCCC--cchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 347789998443 45678888999888753 2 3333221111111100000 00011 11256677
Q ss_pred HHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCC-----cceEEEEeccccChhHHhhhcchhhhhhhhhhcCChh
Q 004816 557 SCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRD-----TFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEK 630 (729)
Q Consensus 557 ~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~-----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 630 (729)
.+++.+.++.. .+++.++||||||.+++.++. +|+ +++++|++++..+............... ......
T Consensus 82 ~~i~~l~~~~~--~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~---~p~~~~ 156 (254)
T 3ds8_A 82 IAMEDLKSRYG--FTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFKK---LPNSTP 156 (254)
T ss_dssp HHHHHHHHHHC--CSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTCSS---CSSCCH
T ss_pred HHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccccccccccc---CCcchH
Confidence 77788877643 368999999999999999987 877 8999999998765432221111100000 000011
Q ss_pred hhhhcC-cccccCCCCCCEEEEEeC------CCCCCChHHHHHHHHHHHhCCCCEEEEEECC--CCcccCCcccHHHHHH
Q 004816 631 DYYEKS-PINFVDKFSCPIILFQGL------EDKVVPPDQARKIYKALKENGLPVALVEYEG--EQHGFRKAENIKFTLE 701 (729)
Q Consensus 631 ~~~~~s-p~~~~~~i~~PvL~i~G~------~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~--~gH~~~~~~~~~~~~~ 701 (729)
.+.... ....+.+ ++|+|.|+|. .|.+||+..++.+...++......+.+++.+ ++|.... ++ .+..+
T Consensus 157 ~~~~~~~~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~-~~-~~v~~ 233 (254)
T 3ds8_A 157 QMDYFIKNQTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLH-ET-PKSIE 233 (254)
T ss_dssp HHHHHHHTGGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGG-GS-HHHHH
T ss_pred HHHHHHHHHhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhccc-CC-HHHHH
Confidence 111100 0111222 6899999999 9999999999988877776555566667766 6687533 23 35778
Q ss_pred HHHHHHHHHhC
Q 004816 702 QQMVFFARVVG 712 (729)
Q Consensus 702 ~~~~fl~~~l~ 712 (729)
.+..||.++..
T Consensus 234 ~i~~fL~~~~~ 244 (254)
T 3ds8_A 234 KTYWFLEKFKT 244 (254)
T ss_dssp HHHHHHHTCCC
T ss_pred HHHHHHHHhcC
Confidence 88888888755
No 248
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.31 E-value=8e-10 Score=114.68 Aligned_cols=267 Identities=10% Similarity=0.025 Sum_probs=157.7
Q ss_pred CccCceEEcC-C---CcEEEEeecCCCCCceEEEEcCCCCCCCCc-ccCCCCCcccccccccCCceEEEECC-EEEEEEC
Q 004816 89 KRLGGTAVDG-H---GRLIWLESRPTEAGRGVLVKEPAKAGDEPS-DITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNY 162 (729)
Q Consensus 89 ~~~~~~~~~p-g---~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~ 162 (729)
..+.++.|+| + +.+..+.. .++...+|..... +.. .....+ +..+..+..++.+ .++++..
T Consensus 33 ~~V~~v~~~~~~~~~~~~l~tgs---~D~~v~vW~~~~~---~~~~~~~l~g-------h~~~v~~~~~~~~~~~l~s~s 99 (321)
T 3ow8_A 33 DAIWSVAWGTNKKENSETVVTGS---LDDLVKVWKWRDE---RLDLQWSLEG-------HQLGVVSVDISHTLPIAASSS 99 (321)
T ss_dssp SCEEEEEEC-------CEEEEEE---TTSCEEEEEEETT---EEEEEEEECC-------CSSCEEEEEECSSSSEEEEEE
T ss_pred CcEEEEEEecCCCCCCCEEEEEc---CCCCEEEEECCCC---Ceeeeeeecc-------CCCCEEEEEECCCCCEEEEEe
Confidence 3456788876 3 23444433 3567778876432 111 101111 1222334444433 4666777
Q ss_pred CCCcEEEEeCCCCCCC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE-eeeCC
Q 004816 163 KDQRLYKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV-LVSGS 240 (729)
Q Consensus 163 ~~~~l~~~d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~-lt~~~ 240 (729)
.++.|.+||+.+ ++ ...+... .......+|+|||+.|+....+ ..|.++++.+++... +....
T Consensus 100 ~D~~i~lWd~~~--~~~~~~~~~~----~~~~~~~~~spdg~~l~~g~~d---------g~v~i~~~~~~~~~~~~~~~~ 164 (321)
T 3ow8_A 100 LDAHIRLWDLEN--GKQIKSIDAG----PVDAWTLAFSPDSQYLATGTHV---------GKVNIFGVESGKKEYSLDTRG 164 (321)
T ss_dssp TTSEEEEEETTT--TEEEEEEECC----TTCCCCEEECTTSSEEEEECTT---------SEEEEEETTTCSEEEEEECSS
T ss_pred CCCcEEEEECCC--CCEEEEEeCC----CccEEEEEECCCCCEEEEEcCC---------CcEEEEEcCCCceeEEecCCC
Confidence 788999999987 43 3344433 2345678899999987765432 468889998877654 33344
Q ss_pred CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCC
Q 004816 241 DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNG 320 (729)
Q Consensus 241 ~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g 320 (729)
......+|||||++|+..+. ...|.++|+. +++. ...+.+.. ..+..+.|+|||++++.... .+
T Consensus 165 ~~v~~~~~spdg~~lasg~~--------dg~i~iwd~~-~~~~--~~~~~~h~----~~v~~l~~spd~~~l~s~s~-dg 228 (321)
T 3ow8_A 165 KFILSIAYSPDGKYLASGAI--------DGIINIFDIA-TGKL--LHTLEGHA----MPIRSLTFSPDSQLLVTASD-DG 228 (321)
T ss_dssp SCEEEEEECTTSSEEEEEET--------TSCEEEEETT-TTEE--EEEECCCS----SCCCEEEECTTSCEEEEECT-TS
T ss_pred ceEEEEEECCCCCEEEEEcC--------CCeEEEEECC-CCcE--EEEEcccC----CceeEEEEcCCCCEEEEEcC-CC
Confidence 55678899999999987662 2348999998 6654 44555554 56678899999995555544 34
Q ss_pred ceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce-EeeccCCc
Q 004816 321 FWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-SLLDIPFT 398 (729)
Q Consensus 321 ~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~-~~lt~~~~ 398 (729)
.|.++|..+++..... .....+.. +.|.+ +++ ++++...++...|| |+.+++. ..+.....
T Consensus 229 --~i~iwd~~~~~~~~~~~~h~~~v~~---------~~~sp---~~~-~l~s~s~D~~v~iw--d~~~~~~~~~~~~h~~ 291 (321)
T 3ow8_A 229 --YIKIYDVQHANLAGTLSGHASWVLN---------VAFCP---DDT-HFVSSSSDKSVKVW--DVGTRTCVHTFFDHQD 291 (321)
T ss_dssp --CEEEEETTTCCEEEEECCCSSCEEE---------EEECT---TSS-EEEEEETTSCEEEE--ETTTTEEEEEECCCSS
T ss_pred --eEEEEECCCcceeEEEcCCCCceEE---------EEECC---CCC-EEEEEeCCCcEEEE--eCCCCEEEEEEcCCCC
Confidence 3666687776544333 22222223 33432 554 45566677876666 6666653 34444555
Q ss_pred ceEEe-eeeCCEEEEEEeC
Q 004816 399 DIDNI-TLGNDCLFVEGAS 416 (729)
Q Consensus 399 ~v~~~-~~~~~~~~~~~~~ 416 (729)
.|..+ ..+++..++.++.
T Consensus 292 ~v~~v~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 292 QVWGVKYNGNGSKIVSVGD 310 (321)
T ss_dssp CEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEeC
Confidence 67777 4444445555543
No 249
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=99.31 E-value=7.1e-12 Score=128.92 Aligned_cols=200 Identities=10% Similarity=-0.014 Sum_probs=119.4
Q ss_pred CCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHH-HHHhCCCC
Q 004816 490 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCAT-FLVGSGKA 568 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~ 568 (729)
...|.||++||.+.......|......|. .+|.|+.+|++|.+..... ...++++...+. .+.+. .
T Consensus 65 ~~~~~lvllhG~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~----------~~~~~~~a~~~~~~l~~~--~ 131 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPHEFTRLAGALR-GIAPVRAVPQPGYEEGEPL----------PSSMAAVAAVQADAVIRT--Q 131 (300)
T ss_dssp SCSSEEEECCCSSTTCSTTTTHHHHHHTS-SSCCBCCCCCTTSSTTCCB----------CSSHHHHHHHHHHHHHHH--C
T ss_pred CCCCeEEEECCCcccCcHHHHHHHHHhcC-CCceEEEecCCCCCCCCCC----------CCCHHHHHHHHHHHHHHh--c
Confidence 44688999999854432355666666665 4699999999976542211 122444443332 44443 2
Q ss_pred CCCcEEEEEcChHHHHHHHHHh-CC---CcceEEEEeccccChhH-HhhhcchhhhhhhhhhcCC------------hhh
Q 004816 569 DEKRLCITGGSAGGYTTLAALA-FR---DTFKAGASLYGVADLSM-LRAETHKFESRYIDNLVGS------------EKD 631 (729)
Q Consensus 569 d~~ri~i~G~S~GG~~a~~~~~-~~---~~~~a~v~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~------------~~~ 631 (729)
+.+++.|+|||+||.+++.++. +| ++++++|+.++...... .... +........... ...
T Consensus 132 ~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (300)
T 1kez_A 132 GDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNA---WLEELTATLFDRETVRMDDTRLTALGA 208 (300)
T ss_dssp SSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHH---HHHHHHGGGCCCCSSCCCHHHHHHHHH
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHH---HHHHHHHHHHhCcCCccchHHHHHHHH
Confidence 3468999999999999999987 66 58999999987653221 1000 000000111100 011
Q ss_pred hhhcCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHH
Q 004816 632 YYEKSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKEN-GLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARV 710 (729)
Q Consensus 632 ~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~-g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 710 (729)
+...-......++++|+|+++|+ |..+++.. .. +... ..+++++++++ ||.+...+....+.+.+.+|+.+.
T Consensus 209 ~~~~~~~~~~~~i~~P~lii~G~-d~~~~~~~-~~----~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~fl~~~ 281 (300)
T 1kez_A 209 YDRLTGQWRPRETGLPTLLVSAG-EPMGPWPD-DS----WKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDAWLGGG 281 (300)
T ss_dssp HHHHTTTCCCCCCSCCBEEEEES-SCSSCCCS-SC----CSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHHHHHHTCC
T ss_pred HHHHHhcCCCCCCCCCEEEEEeC-CCCCCCcc-cc----hhhhcCCCCeEEEecC-CChhhccccHHHHHHHHHHHHHhc
Confidence 11110111346789999999995 66666544 22 2222 22568999999 998653356678888888998776
Q ss_pred hC
Q 004816 711 VG 712 (729)
Q Consensus 711 l~ 712 (729)
..
T Consensus 282 ~~ 283 (300)
T 1kez_A 282 NS 283 (300)
T ss_dssp --
T ss_pred cC
Confidence 54
No 250
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.29 E-value=1.1e-09 Score=113.54 Aligned_cols=240 Identities=9% Similarity=-0.011 Sum_probs=147.2
Q ss_pred CceEEEECC-EEEEEECCCCcEEEEeCCCCCCCCeecCCCC-CCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEE
Q 004816 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDY-GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (729)
Q Consensus 147 ~~~~~~~~~-~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~-~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~ 224 (729)
..+..++++ .+++... ++.|.+|++.++ +....+.... ......+...+|+|||+.|+....+ ..|.
T Consensus 54 v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~ 122 (337)
T 1gxr_A 54 VCAVTISNPTRHVYTGG-KGCVKVWDISHP-GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA---------STLS 122 (337)
T ss_dssp CCEEEECSSSSEEEEEC-BSEEEEEETTST-TCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---------SEEE
T ss_pred eEEEEEecCCcEEEEcC-CCeEEEEECCCC-CceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---------CcEE
Confidence 334444433 3444444 789999999862 2222221100 0013456788999999988776543 4689
Q ss_pred EEEcCCCceE---EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCcccccc
Q 004816 225 AIALNGQNIQ---VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 301 (729)
Q Consensus 225 ~~dl~~g~~~---~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 301 (729)
++++.+++.. .+..........+|+|||+.|+.... ...|+++|+. +++. ...+.... ..+.
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--------dg~v~~~d~~-~~~~--~~~~~~~~----~~i~ 187 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS--------DGNIAVWDLH-NQTL--VRQFQGHT----DGAS 187 (337)
T ss_dssp EEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET--------TSCEEEEETT-TTEE--EEEECCCS----SCEE
T ss_pred EEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC--------CCcEEEEeCC-CCce--eeeeeccc----CceE
Confidence 9999887632 23334455677899999998887662 2349999988 5654 44455444 5567
Q ss_pred CceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEE
Q 004816 302 EPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 381 (729)
Q Consensus 302 ~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly 381 (729)
.+.|+|||++++.... .+ .|.++|+.+++...............|++ +++.++ ....++. |+
T Consensus 188 ~~~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~v~~~~~s~------------~~~~l~-~~~~~~~--i~ 249 (337)
T 1gxr_A 188 CIDISNDGTKLWTGGL-DN--TVRSWDLREGRQLQQHDFTSQIFSLGYCP------------TGEWLA-VGMESSN--VE 249 (337)
T ss_dssp EEEECTTSSEEEEEET-TS--EEEEEETTTTEEEEEEECSSCEEEEEECT------------TSSEEE-EEETTSC--EE
T ss_pred EEEECCCCCEEEEEec-CC--cEEEEECCCCceEeeecCCCceEEEEECC------------CCCEEE-EEcCCCc--EE
Confidence 8899999994444443 33 57778888887655543333333333432 555554 4445564 55
Q ss_pred EEECCCCceEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 382 ILDDFGHSLSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 382 ~~d~~~g~~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
.+++.+++...+......+..+ ..+++.+++..+.. ..++.+++.+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~ 299 (337)
T 1gxr_A 250 VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD---NLLNAWRTPYGAS 299 (337)
T ss_dssp EEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTCCE
T ss_pred EEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCC---CcEEEEECCCCeE
Confidence 5678888877776666677777 44455555555543 4688888877764
No 251
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.28 E-value=2.6e-10 Score=119.31 Aligned_cols=159 Identities=11% Similarity=0.006 Sum_probs=99.2
Q ss_pred CEEEEEECCCCcEEEEeCCCCCCCCe-ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce
Q 004816 155 DTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (729)
Q Consensus 155 ~~i~~~~~~~~~l~~~d~~~~~~~~~-~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~ 233 (729)
+.++++...++.|+++|+.+ ++.. .+.... ......++|+|||++++++... ...|+++|+++++.
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~---~~~~~~~~~s~dg~~~~v~~~~--------~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVAS--DTVYKSCVMPD---KFGPGTAMMAPDNRTAYVLNNH--------YGDIYGIDLDTCKN 77 (349)
T ss_dssp CEEEEEEETTTEEEEEETTT--TEEEEEEECSS---CCSSCEEEECTTSSEEEEEETT--------TTEEEEEETTTTEE
T ss_pred CEEEEEeCCCCeEEEEECCC--CcEEEEEecCC---CCCCceeEECCCCCEEEEEeCC--------CCcEEEEeCCCCcE
Confidence 35666666788999999987 5443 333221 0124677899999976666432 25799999998876
Q ss_pred EEeeeCCC-------eeeeeeeCCCCCeEEEEEecC--CCCCC--CCcEEEEEEecCCCCeee-eEEecCCCCCcccccc
Q 004816 234 QVLVSGSD-------FYAFPRMDPRGERMAWIEWHH--PNMPW--DKAELWVGYISENGDVYK-RVCVAGFDPTIVESPT 301 (729)
Q Consensus 234 ~~lt~~~~-------~~~~~~~SPDG~~la~~~~~~--~~~~~--~~~~l~~~d~~~~g~~~~-~~~~~~~~~~~~~~~~ 301 (729)
........ ......|||||++|++...+. ....+ ....|+++|++ +++... ....... ..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~-----~~~~ 151 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA-DGLEAKPVRTFPMP-----RQVY 151 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG-GGGGBCCSEEEECC-----SSCC
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECC-CccccceeeeccCC-----Cccc
Confidence 54433211 135679999999998877330 00000 13579999998 554322 2233222 3345
Q ss_pred CceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEee
Q 004816 302 EPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 338 (729)
Q Consensus 302 ~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~ 338 (729)
.+.|+|||++ |.... .|+++|+++++.....
T Consensus 152 ~~~~s~dg~l-~~~~~-----~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 152 LMRAADDGSL-YVAGP-----DIYKMDVKTGKYTVAL 182 (349)
T ss_dssp CEEECTTSCE-EEESS-----SEEEECTTTCCEEEEE
T ss_pred ceeECCCCcE-EEccC-----cEEEEeCCCCceeccc
Confidence 6779999994 44322 2899999888765544
No 252
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.28 E-value=2.2e-10 Score=117.56 Aligned_cols=243 Identities=8% Similarity=0.039 Sum_probs=143.0
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcE
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRL 167 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l 167 (729)
-.++|.|+| ++.+||++.. .+ .|++++..+ ++.+.+ ..+ .....+.++.+ .+++.. ...|
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~---~~--~i~~~d~~~-~~~~~~-~~~---------~~~~~i~~~~dG~l~v~~--~~~l 75 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIP---AK--KVCRWDSFT-KQVQRV-TMD---------APVSSVALRQSGGYVATI--GTKF 75 (297)
T ss_dssp BEEEEEEETTTTEEEEEETT---TT--EEEEEETTT-CCEEEE-ECS---------SCEEEEEEBTTSSEEEEE--TTEE
T ss_pred cccCCeEECCCCEEEEEECC---CC--EEEEEECCC-CcEEEE-eCC---------CceEEEEECCCCCEEEEE--CCeE
Confidence 458999999 8999999863 23 467777662 222222 111 01223444432 344443 4579
Q ss_pred EEEeCCCCCCCCeecCCCC-CCCceeeecceecCCCCEEEEEEeccCC--CCCCcceEEEEEEcCCCceEEeeeCCCeee
Q 004816 168 YKHSIDSKDSSPLPITPDY-GEPLVSYADGIFDPRFNRYVTVREDRRQ--DALNSTTEIVAIALNGQNIQVLVSGSDFYA 244 (729)
Q Consensus 168 ~~~d~~~~~~~~~~lt~~~-~~~~~~~~~~~~SPdG~~l~~~~~~~~~--~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~ 244 (729)
+++++++ ++.+.+.... +....+.++.+++|||+.++........ ........||+++.+ ++...+..+....+
T Consensus 76 ~~~d~~~--g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pn 152 (297)
T 3g4e_A 76 CALNWKE--QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISN 152 (297)
T ss_dssp EEEETTT--TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEE
T ss_pred EEEECCC--CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeecccccc
Confidence 9999987 6666554321 1123667899999999954433332110 000123679999986 55655655555667
Q ss_pred eeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEec-CCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceE
Q 004816 245 FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYIS-ENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWN 323 (729)
Q Consensus 245 ~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~-~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~ 323 (729)
+.+|||||+.|+++... ...|++++++ .+|.+.+.+.+.... ........+++++||+|++.... ...
T Consensus 153 gi~~spdg~~lyv~~~~-------~~~i~~~~~d~~~G~~~~~~~~~~~~-~~~~~p~g~~~d~~G~lwva~~~---~~~ 221 (297)
T 3g4e_A 153 GLDWSLDHKIFYYIDSL-------SYSVDAFDYDLQTGQISNRRSVYKLE-KEEQIPDGMCIDAEGKLWVACYN---GGR 221 (297)
T ss_dssp EEEECTTSCEEEEEEGG-------GTEEEEEEECTTTCCEEEEEEEEECC-GGGCEEEEEEEBTTSCEEEEEET---TTE
T ss_pred ceEEcCCCCEEEEecCC-------CCcEEEEeccCCCCcccCcEEEEECC-CCCCCCCeeEECCCCCEEEEEcC---CCE
Confidence 89999999999887732 3459999884 367665444443221 00034456789999976555433 246
Q ss_pred EEEEEcCCCeEEEeeccC-ccccCCcccccCcceeee-eecCCCCEEEEEEEECC
Q 004816 324 LHKWIESNNEVLAIYSLD-AEFSRPLWVFGINSYEII-QSHGEKNLIACSYRQNG 376 (729)
Q Consensus 324 l~~~d~~~g~~~~l~~~~-~~~~~~~w~~~~~~~~~l-~~~~~~~~l~~~s~~~g 376 (729)
|+++|+++|+........ ... ..+.|. + +++.||+++...+
T Consensus 222 v~~~d~~tG~~~~~i~~p~~~~---------t~~~f~g~---d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKLPVDKT---------TSCCFGGK---NYSEMYVTCARDG 264 (297)
T ss_dssp EEEECTTTCCEEEEEECSSSBE---------EEEEEESG---GGCEEEEEEBCTT
T ss_pred EEEEcCCCceEEEEEECCCCCc---------eEEEEeCC---CCCEEEEEcCCcC
Confidence 999999877654433221 111 233443 2 5667777776543
No 253
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.28 E-value=2.5e-10 Score=116.85 Aligned_cols=256 Identities=10% Similarity=-0.005 Sum_probs=152.3
Q ss_pred HhccCCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC-CEEEEEE
Q 004816 84 VSGASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG-DTVIFSN 161 (729)
Q Consensus 84 i~~~~~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~ 161 (729)
+......+++|.|+| |+.+||+.... + .|++++.. + ..+.+.... .....+.++. +.+++..
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~---~--~i~~~~~~-~-~~~~~~~~~---------~~~~~l~~~~dg~l~v~~ 86 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQ---N--RTWAWSDD-G-QLSPEMHPS---------HHQNGHCLNKQGHLIACS 86 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGG---T--EEEEEETT-S-CEEEEESSC---------SSEEEEEECTTCCEEEEE
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCC---C--EEEEEECC-C-CeEEEECCC---------CCcceeeECCCCcEEEEe
Confidence 333345678999999 77899998633 3 36666666 2 222222111 0112344443 3566665
Q ss_pred CCCCcEEEEeCCCCCCCCeecCCCCCC-CceeeecceecCCCCEEEEEEec-cC--------CCCCCcceEEEEEEcCCC
Q 004816 162 YKDQRLYKHSIDSKDSSPLPITPDYGE-PLVSYADGIFDPRFNRYVTVRED-RR--------QDALNSTTEIVAIALNGQ 231 (729)
Q Consensus 162 ~~~~~l~~~d~~~~~~~~~~lt~~~~~-~~~~~~~~~~SPdG~~l~~~~~~-~~--------~~~~~~~~~l~~~dl~~g 231 (729)
...+.|+++++.+ ++.+.+...... ......+++++|||+. +++... .. .........||+++.+ +
T Consensus 87 ~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~i~~d~~G~l-~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (296)
T 3e5z_A 87 HGLRRLERQREPG--GEWESIADSFEGKKLNSPNDVCLAPDGSL-WFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G 162 (296)
T ss_dssp TTTTEEEEECSTT--CCEEEEECEETTEECCCCCCEEECTTSCE-EEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S
T ss_pred cCCCeEEEEcCCC--CcEEEEeeccCCCCCCCCCCEEECCCCCE-EEECCccccccccccccccccCCCcEEEEECCC-C
Confidence 5567899999976 666655432110 1123467899999984 343210 00 0000112579999988 7
Q ss_pred ceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe-eeeEEecCCCCCccccccCceeCCCCc
Q 004816 232 NIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YKRVCVAGFDPTIVESPTEPKWSSKGE 310 (729)
Q Consensus 232 ~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~-~~~~~~~~~~~~~~~~~~~~~wspDG~ 310 (729)
+.+.+........+.+|||||+.| ++... ...|++++++.+|++ .....+.... ..+..+++++||+
T Consensus 163 ~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~~----~~p~~i~~d~~G~ 230 (296)
T 3e5z_A 163 TLSAPIRDRVKPNGLAFLPSGNLL-VSDTG-------DNATHRYCLNARGETEYQGVHFTVEP----GKTDGLRVDAGGL 230 (296)
T ss_dssp CEEEEECCCSSEEEEEECTTSCEE-EEETT-------TTEEEEEEECSSSCEEEEEEEECCSS----SCCCSEEEBTTSC
T ss_pred CEEEeecCCCCCccEEECCCCCEE-EEeCC-------CCeEEEEEECCCCcCcCCCeEeeCCC----CCCCeEEECCCCC
Confidence 777776666666789999999988 66522 346999998644665 4444442222 4556789999998
Q ss_pred EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce
Q 004816 311 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 390 (729)
Q Consensus 311 l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~ 390 (729)
|++.. . ..|+++++++.....+..... .. .+.|.. .+++.|++++. + .||+++++++.+
T Consensus 231 l~v~~-~----~~v~~~~~~g~~~~~~~~~~~-~~---------~~~f~~--~d~~~L~v~t~-~---~l~~~~~~~~~~ 289 (296)
T 3e5z_A 231 IWASA-G----DGVHVLTPDGDELGRVLTPQT-TS---------NLCFGG--PEGRTLYMTVS-T---EFWSIETNVRGL 289 (296)
T ss_dssp EEEEE-T----TEEEEECTTSCEEEEEECSSC-CC---------EEEEES--TTSCEEEEEET-T---EEEEEECSCCBC
T ss_pred EEEEc-C----CeEEEECCCCCEEEEEECCCC-ce---------eEEEEC--CCCCEEEEEcC-C---eEEEEEcccccc
Confidence 66555 3 358899998655555542221 21 233321 05566666653 2 699999988776
Q ss_pred Ee
Q 004816 391 SL 392 (729)
Q Consensus 391 ~~ 392 (729)
+.
T Consensus 290 ~~ 291 (296)
T 3e5z_A 290 EH 291 (296)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 254
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.27 E-value=2.5e-09 Score=112.40 Aligned_cols=287 Identities=10% Similarity=0.043 Sum_probs=167.0
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCC
Q 004816 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (729)
Q Consensus 88 ~~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~ 165 (729)
...+..+.|+| ++.++.-. .++...+|....+ +....+.. +.....+..++.+ ..+++...++
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~----~dg~i~vwd~~~~---~~~~~~~~--------h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCS----KDSSASVWYSLNG---ERLGTLDG--------HTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEE----SSSCEEEEETTTC---CEEEEECC--------CSSCEEEEEECTTSSEEEEEETTT
T ss_pred eceEEEEEEcCCCCEEEEEe----CCCEEEEEeCCCc---hhhhhhhh--------cCCcEEEEEEcCCCCEEEEEeCCC
Confidence 34567899999 65554432 3567777765433 32222211 1112334444432 3455556688
Q ss_pred cEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce------------
Q 004816 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI------------ 233 (729)
Q Consensus 166 ~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~------------ 233 (729)
.|.+||+.+ ++....... ...+....|+|+|+.++....+.... ...|.++++.++..
T Consensus 97 ~i~iwd~~~--~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~~~~~----~g~i~~~d~~~~~~~~~~~~~~~~~~ 166 (369)
T 3zwl_B 97 SIKLWDVSN--GQCVATWKS----PVPVKRVEFSPCGNYFLAILDNVMKN----PGSINIYEIERDSATHELTKVSEEPI 166 (369)
T ss_dssp EEEEEETTT--CCEEEEEEC----SSCEEEEEECTTSSEEEEEECCBTTB----CCEEEEEEEEECTTTCCEEEECSSCS
T ss_pred eEEEEECCC--CcEEEEeec----CCCeEEEEEccCCCEEEEecCCccCC----CCEEEEEEecCCccceeeccccccee
Confidence 999999987 544333323 34567889999999988876642111 14577777765421
Q ss_pred EEeeeCCC--eeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCC-CCeeeeEEecCCCCCccccccCceeCCCCc
Q 004816 234 QVLVSGSD--FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN-GDVYKRVCVAGFDPTIVESPTEPKWSSKGE 310 (729)
Q Consensus 234 ~~lt~~~~--~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~-g~~~~~~~~~~~~~~~~~~~~~~~wspDG~ 310 (729)
..+..... .....+|+|||+.|+... ....|+++|+. + +.. ...+.... ..+..+.|+|||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~dg~i~i~d~~-~~~~~--~~~~~~~~----~~v~~~~~~~~~~ 231 (369)
T 3zwl_B 167 HKIITHEGLDAATVAGWSTKGKYIIAGH--------KDGKISKYDVS-NNYEY--VDSIDLHE----KSISDMQFSPDLT 231 (369)
T ss_dssp EEEECCTTCCCEEEEEECGGGCEEEEEE--------TTSEEEEEETT-TTTEE--EEEEECCS----SCEEEEEECTTSS
T ss_pred eeccCCcCccceeEEEEcCCCCEEEEEc--------CCCEEEEEECC-CCcEe--EEEEecCC----CceeEEEECCCCC
Confidence 22222122 566789999999888765 23459999998 4 333 44444444 5667889999999
Q ss_pred EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEEC-----------CeEE
Q 004816 311 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN-----------GRSY 379 (729)
Q Consensus 311 l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~-----------g~~~ 379 (729)
+++.... .+ .|.++|..+++...............|.+ +++.++...... +...
T Consensus 232 ~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~~~~~~~~~~~~~~~~~~~~ 296 (369)
T 3zwl_B 232 YFITSSR-DT--NSFLVDVSTLQVLKKYETDCPLNTAVITP------------LKEFIILGGGQEAKDVTTTSANEGKFE 296 (369)
T ss_dssp EEEEEET-TS--EEEEEETTTCCEEEEEECSSCEEEEEECS------------SSSEEEEEECCC-------------CE
T ss_pred EEEEecC-Cc--eEEEEECCCCceeeeecCCCCceeEEecC------------CCceEEEeecCCCceEEEEecCCCcce
Confidence 4444443 23 57778888877665554333333344443 455444443322 2236
Q ss_pred EEEEECCCCceE-eeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 380 LGILDDFGHSLS-LLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 380 ly~~d~~~g~~~-~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
+..++..+++.. .+......+..+ ..+++.+++.++.. ..+.+++++.+.
T Consensus 297 i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---g~v~iw~~~~~~ 348 (369)
T 3zwl_B 297 ARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGED---GFIRLHHFEKSY 348 (369)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEEECHHH
T ss_pred eEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCC---CeEEEEECcccc
Confidence 777787776644 444455667777 44455566655543 356666666553
No 255
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.26 E-value=3.9e-09 Score=109.39 Aligned_cols=269 Identities=9% Similarity=0.011 Sum_probs=157.9
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCC
Q 004816 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (729)
Q Consensus 88 ~~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~ 165 (729)
...+..+.|+| ++.++... ++...+|..... +....+.. ....-+........++++ ..++....++
T Consensus 51 ~~~v~~~~~~~~~~~l~~~~-----dg~i~iw~~~~~--~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 119 (337)
T 1gxr_A 51 GEVVCAVTISNPTRHVYTGG-----KGCVKVWDISHP--GNKSPVSQ----LDCLNRDNYIRSCKLLPDGCTLIVGGEAS 119 (337)
T ss_dssp SSCCCEEEECSSSSEEEEEC-----BSEEEEEETTST--TCCSCSEE----EECSCTTSBEEEEEECTTSSEEEEEESSS
T ss_pred CCceEEEEEecCCcEEEEcC-----CCeEEEEECCCC--Cceeeeec----ccccCCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 34567899999 66555432 467778876544 11111110 000001112333444433 3444555678
Q ss_pred cEEEEeCCCCCCCCe---ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEee-eCCC
Q 004816 166 RLYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLV-SGSD 241 (729)
Q Consensus 166 ~l~~~d~~~~~~~~~---~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt-~~~~ 241 (729)
.|.+|++.+ ++.. .+... ...+....|+|+|+.|+....+ ..|+++|+.+++..... ....
T Consensus 120 ~i~~~d~~~--~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~d---------g~v~~~d~~~~~~~~~~~~~~~ 184 (337)
T 1gxr_A 120 TLSIWDLAA--PTPRIKAELTSS----APACYALAISPDSKVCFSCCSD---------GNIAVWDLHNQTLVRQFQGHTD 184 (337)
T ss_dssp EEEEEECCC--C--EEEEEEECS----SSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTTEEEEEECCCSS
T ss_pred cEEEEECCC--CCcceeeecccC----CCceEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCceeeeeecccC
Confidence 899999987 5422 22222 2346778999999987766543 45899999887665443 3445
Q ss_pred eeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCc
Q 004816 242 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGF 321 (729)
Q Consensus 242 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~ 321 (729)
......|+|||+.|+... ....|+++|+. +++. ..... .. ..+..+.|+|||++++.... .+
T Consensus 185 ~i~~~~~~~~~~~l~~~~--------~dg~i~~~d~~-~~~~--~~~~~-~~----~~v~~~~~s~~~~~l~~~~~-~~- 246 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGG--------LDNTVRSWDLR-EGRQ--LQQHD-FT----SQIFSLGYCPTGEWLAVGME-SS- 246 (337)
T ss_dssp CEEEEEECTTSSEEEEEE--------TTSEEEEEETT-TTEE--EEEEE-CS----SCEEEEEECTTSSEEEEEET-TS-
T ss_pred ceEEEEECCCCCEEEEEe--------cCCcEEEEECC-CCce--Eeeec-CC----CceEEEEECCCCCEEEEEcC-CC-
Confidence 667889999999888766 23459999998 5654 22232 22 44567899999994444433 23
Q ss_pred eEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccCCcceE
Q 004816 322 WNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDID 401 (729)
Q Consensus 322 ~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~~~~v~ 401 (729)
.|.++|..+++...+......+....|.+ +++ ++++...+|...+ +++.+++..........+.
T Consensus 247 -~i~~~~~~~~~~~~~~~~~~~v~~~~~~~------------~~~-~l~~~~~dg~i~~--~~~~~~~~~~~~~~~~~v~ 310 (337)
T 1gxr_A 247 -NVEVLHVNKPDKYQLHLHESCVLSLKFAY------------CGK-WFVSTGKDNLLNA--WRTPYGASIFQSKESSSVL 310 (337)
T ss_dssp -CEEEEETTSSCEEEECCCSSCEEEEEECT------------TSS-EEEEEETTSEEEE--EETTTCCEEEEEECSSCEE
T ss_pred -cEEEEECCCCCeEEEcCCccceeEEEECC------------CCC-EEEEecCCCcEEE--EECCCCeEEEEecCCCcEE
Confidence 47777888887666554433333334443 555 4455556675555 4777776654444455566
Q ss_pred Ee-eeeCCEEEEEEeC
Q 004816 402 NI-TLGNDCLFVEGAS 416 (729)
Q Consensus 402 ~~-~~~~~~~~~~~~~ 416 (729)
.+ ..+++.+++.++.
T Consensus 311 ~~~~s~~~~~l~~~~~ 326 (337)
T 1gxr_A 311 SCDISVDDKYIVTGSG 326 (337)
T ss_dssp EEEECTTSCEEEEEET
T ss_pred EEEECCCCCEEEEecC
Confidence 66 4444555555543
No 256
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.25 E-value=1.1e-11 Score=136.77 Aligned_cols=215 Identities=19% Similarity=0.152 Sum_probs=127.4
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccc-cchhhhHHH-hhCCcEEEEecCCCC-CCCchhHHHhhccCCC
Q 004816 472 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYW-TSRGWAFVDVNYGGS-TGYGREFRERLLGRWG 548 (729)
Q Consensus 472 l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~~~~l-a~~G~~v~~~d~rGs-~g~g~~~~~~~~~~~~ 548 (729)
+...+|.|.+.. ..++.|+||++|||++..... .+....... ...|++|+.+|||.+ -|++........+ .+
T Consensus 86 l~l~v~~P~~~~----~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~-~~ 160 (522)
T 1ukc_A 86 LFINVFKPSTAT----SQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNG-DL 160 (522)
T ss_dssp CEEEEEEETTCC----TTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSS-CT
T ss_pred CEEEEEECCCCC----CCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccC-CC
Confidence 445667776521 245689999999987543322 233221111 256999999999942 2433322111111 12
Q ss_pred cccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHh-C----CCcceEEEEeccccChhHHhhhcchhhhh
Q 004816 549 IVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALA-F----RDTFKAGASLYGVADLSMLRAETHKFESR 620 (729)
Q Consensus 549 ~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~-~----~~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 620 (729)
...+.|+.++++|+.++ ...|++||.|+|+|+||+++..++. . ..+|+++|+.+|.................
T Consensus 161 n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~ 240 (522)
T 1ukc_A 161 NAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTVSEMEFQFER 240 (522)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCCSGGGHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCCHHHHHHHHHH
Confidence 23489999999999875 2468999999999999998876665 2 67899999999875422111111111112
Q ss_pred hhhhhcCC-----hhhhhhcCc---------ccccCCCCCC--EEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEEC
Q 004816 621 YIDNLVGS-----EKDYYEKSP---------INFVDKFSCP--IILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYE 684 (729)
Q Consensus 621 ~~~~~~~~-----~~~~~~~sp---------~~~~~~i~~P--vL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ 684 (729)
+...+--. .+.++..++ +........| .+.++...|..+.+++..++.+.-+..++++-+-...
T Consensus 241 ~~~~~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g~~~~vp~l~G~~~ 320 (522)
T 1ukc_A 241 FVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGNFIKVPVLVGDDT 320 (522)
T ss_dssp HHHHTTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHTCSCCCCEEEEEET
T ss_pred HHHHcCCCCHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCcccCCCHHHHHhcCCCCCCCEEEEeec
Confidence 22111000 111121111 1111112233 4556677787777777777777766667788888899
Q ss_pred CCCcccC
Q 004816 685 GEQHGFR 691 (729)
Q Consensus 685 ~~gH~~~ 691 (729)
+|||.|.
T Consensus 321 ~Eg~~f~ 327 (522)
T 1ukc_A 321 DEGSNFA 327 (522)
T ss_dssp BGGGGTS
T ss_pred chhHHhh
Confidence 9999875
No 257
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.25 E-value=7.2e-11 Score=116.78 Aligned_cols=209 Identities=11% Similarity=0.044 Sum_probs=129.3
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCc--EEEEecCCCCCC--C-chh--HHHhh-----ccC--CCc--ccHHHH
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGW--AFVDVNYGGSTG--Y-GRE--FRERL-----LGR--WGI--VDVNDC 555 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~--~v~~~d~rGs~g--~-g~~--~~~~~-----~~~--~~~--~~~~D~ 555 (729)
.+.||++||.. .....|..+++.|.+.|| .|+.+|.++.|. + |.- ..... ..+ -+. ...+++
T Consensus 6 ~~pvvliHG~~--~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l 83 (249)
T 3fle_A 6 TTATLFLHGYG--GSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWI 83 (249)
T ss_dssp CEEEEEECCTT--CCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHH
T ss_pred CCcEEEECCCC--CChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHH
Confidence 35688899973 345667789999999997 588888765432 0 110 00000 000 011 125678
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CC-----CcceEEEEeccccChhHHhhhcchhhhhhhhh--hcC
Q 004816 556 CSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FR-----DTFKAGASLYGVADLSMLRAETHKFESRYIDN--LVG 627 (729)
Q Consensus 556 ~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~-----~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~--~~~ 627 (729)
..+++++.++.. .+++.++||||||.+++.++. +| ++++.+|++++..+........... ..+... +..
T Consensus 84 ~~~i~~l~~~~~--~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~-~~~~~~g~p~~ 160 (249)
T 3fle_A 84 KEVLSQLKSQFG--IQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNE-IIVDKQGKPSR 160 (249)
T ss_dssp HHHHHHHHHTTC--CCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTT-SCBCTTCCBSS
T ss_pred HHHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcch-hhhcccCCCcc
Confidence 888888887743 468999999999999999987 65 3799999998765432111100000 000000 000
Q ss_pred ChhhhhhcC-cccccCCCCCCEEEEEeC------CCCCCChHHHHHHHHHHHhCCCCEEEEEECC--CCcccCCcccHHH
Q 004816 628 SEKDYYEKS-PINFVDKFSCPIILFQGL------EDKVVPPDQARKIYKALKENGLPVALVEYEG--EQHGFRKAENIKF 698 (729)
Q Consensus 628 ~~~~~~~~s-p~~~~~~i~~PvL~i~G~------~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~--~gH~~~~~~~~~~ 698 (729)
....|...- -...+.+.++|+|.|+|. .|..||...++.+...++......+.++++| +.|.... ++ .+
T Consensus 161 ~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~-~n-~~ 238 (249)
T 3fle_A 161 MNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLH-EN-KD 238 (249)
T ss_dssp CCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGG-GC-HH
T ss_pred cCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccc-cC-HH
Confidence 011222210 012233357899999998 6999999999988888887777777777866 7897543 23 47
Q ss_pred HHHHHHHHH
Q 004816 699 TLEQQMVFF 707 (729)
Q Consensus 699 ~~~~~~~fl 707 (729)
..+.+.+||
T Consensus 239 V~~~I~~FL 247 (249)
T 3fle_A 239 VANEIIQFL 247 (249)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777788886
No 258
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.24 E-value=1.2e-09 Score=114.41 Aligned_cols=243 Identities=11% Similarity=-0.018 Sum_probs=145.3
Q ss_pred cCCceEEEECCEEEEEECCCCcEEEEeCCCCCCCCe-ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEE
Q 004816 145 YGGGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (729)
Q Consensus 145 ~~~~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~-~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l 223 (729)
.++.+..++++..+++...++.|.+||+.+ ++.. .+..........+...+|||||++|+....+ ..|
T Consensus 83 ~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~--~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---------~~i 151 (344)
T 4gqb_B 83 AGVADLTWVGERGILVASDSGAVELWELDE--NETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---------ICI 151 (344)
T ss_dssp SCEEEEEEETTTEEEEEETTSEEEEEEECT--TSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---------SCE
T ss_pred CCEEEEEEeCCCeEEEEECCCEEEEEeccC--CCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---------CeE
Confidence 345566777665555666788999999987 4432 2111000012456788999999987766543 358
Q ss_pred EEEEcCCCceEEeee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccC
Q 004816 224 VAIALNGQNIQVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 302 (729)
Q Consensus 224 ~~~dl~~g~~~~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~ 302 (729)
.++|+.+++...... .........|+|||+.++.....+ ..|.++|+. +++. ...+...... ..+..
T Consensus 152 ~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D-------~~v~iwd~~-~~~~--~~~~~~~~~~--~~~~~ 219 (344)
T 4gqb_B 152 KVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED-------NRILLWDTR-CPKP--ASQIGCSAPG--YLPTS 219 (344)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT-------SCEEEEETT-SSSC--EEECC----C--CCEEE
T ss_pred EEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc-------ccccccccc-ccce--eeeeecceee--cccee
Confidence 899999887654433 345667789999998765554222 348899998 6654 2222211101 33456
Q ss_pred ceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEE-EeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEE
Q 004816 303 PKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 380 (729)
Q Consensus 303 ~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~-~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~l 380 (729)
+.|+|++. ++..... .+ .|.++|+.+++.. .+......+. .+.|.| ++..++++...++..+|
T Consensus 220 ~~~~p~~~~~l~sg~~-dg--~v~~wd~~~~~~~~~~~~h~~~v~---------~v~fsp---~g~~~lasgs~D~~i~v 284 (344)
T 4gqb_B 220 LAWHPQQSEVFVFGDE-NG--TVSLVDTKSTSCVLSSAVHSQCVT---------GLVFSP---HSVPFLASLSEDCSLAV 284 (344)
T ss_dssp EEECSSCTTEEEEEET-TS--EEEEEESCC--CCEEEECCSSCEE---------EEEECS---SSSCCEEEEETTSCEEE
T ss_pred eeecCCCCcceEEecc-CC--cEEEEECCCCcEEEEEcCCCCCEE---------EEEEcc---CCCeEEEEEeCCCeEEE
Confidence 88999766 6665544 34 4666788776543 3332222222 334443 66667777777887666
Q ss_pred EEEECCCCceEeeccCCcceEEe--eeeCCEEEEEEeCCCCCceEEEEEcCC
Q 004816 381 GILDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDD 430 (729)
Q Consensus 381 y~~d~~~g~~~~lt~~~~~v~~~--~~~~~~~~~~~~~~~~~~~ly~~d~~~ 430 (729)
| |..+++...+......|..+ ++++..+++.++.+. .+...++.+
T Consensus 285 w--d~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~---~v~~w~v~~ 331 (344)
T 4gqb_B 285 L--DSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDH---QVVHHVVPT 331 (344)
T ss_dssp E--CTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTS---CEEEEECCC
T ss_pred E--ECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCC---eEEEEECCC
Confidence 5 78888877766666678777 345555665555432 344444443
No 259
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=99.23 E-value=1.8e-10 Score=123.01 Aligned_cols=227 Identities=15% Similarity=0.029 Sum_probs=134.2
Q ss_pred EEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhh------CCcEEEEecCCCC
Q 004816 459 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS------RGWAFVDVNYGGS 532 (729)
Q Consensus 459 ~~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~------~G~~v~~~d~rGs 532 (729)
.++.+.. +|..|++....+.+ ...|.||++||.+++. ..|...+..|++ .||.|+++|++|.
T Consensus 86 ~~~~~~i--~g~~i~~~~~~~~~--------~~~~pllllHG~~~s~--~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~ 153 (408)
T 3g02_A 86 PQFTTEI--EGLTIHFAALFSER--------EDAVPIALLHGWPGSF--VEFYPILQLFREEYTPETLPFHLVVPSLPGY 153 (408)
T ss_dssp CEEEEEE--TTEEEEEEEECCSC--------TTCEEEEEECCSSCCG--GGGHHHHHHHHHHCCTTTCCEEEEEECCTTS
T ss_pred CCEEEEE--CCEEEEEEEecCCC--------CCCCeEEEECCCCCcH--HHHHHHHHHHhcccccccCceEEEEECCCCC
Confidence 3444444 79999988776533 2346799999986654 446667777877 5999999999976
Q ss_pred CCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCC-cEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccCh---
Q 004816 533 TGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK-RLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADL--- 607 (729)
Q Consensus 533 ~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~-ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~--- 607 (729)
|.+.... ... ....+++...+..+++.. ..+ ++.++|||+||.+++.++. +|+++...+...+....
T Consensus 154 G~S~~~~---~~~---~~~~~~~a~~~~~l~~~l--g~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~~~ 225 (408)
T 3g02_A 154 TFSSGPP---LDK---DFGLMDNARVVDQLMKDL--GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPPEG 225 (408)
T ss_dssp TTSCCSC---SSS---CCCHHHHHHHHHHHHHHT--TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCTTC
T ss_pred CCCCCCC---CCC---CCCHHHHHHHHHHHHHHh--CCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCccc
Confidence 6543321 011 123566666666555552 334 8999999999999999998 87655555544332211
Q ss_pred ------h--H---------Hhhhcchhh------h---------------hhhhh-h--cCC-----h------------
Q 004816 608 ------S--M---------LRAETHKFE------S---------------RYIDN-L--VGS-----E------------ 629 (729)
Q Consensus 608 ------~--~---------~~~~~~~~~------~---------------~~~~~-~--~~~-----~------------ 629 (729)
. . +......+. . .++.. + +.+ .
T Consensus 226 ~~~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y~~t 305 (408)
T 3g02_A 226 PSIESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLT 305 (408)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHT
T ss_pred ccccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHHHhh
Confidence 0 0 000000000 0 00000 0 000 0
Q ss_pred -------hhhhhcCc---c-------cccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCC
Q 004816 630 -------KDYYEKSP---I-------NFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRK 692 (729)
Q Consensus 630 -------~~~~~~sp---~-------~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~ 692 (729)
..|.+... . ..+.++++|+++++|.+|...++. .+.+.. ..-+.+.+++++||.. .
T Consensus 306 ~~~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~---~~~~~~---~~~~~~~~~~~gGHf~-~ 378 (408)
T 3g02_A 306 ESFPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPR---SWIATT---GNLVFFRDHAEGGHFA-A 378 (408)
T ss_dssp THHHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGG---EEEEEEEECSSCBSCH-H
T ss_pred ccchhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccCcH---HHHHhc---CCeeEEEECCCCcCch-h
Confidence 01111100 0 023567899999999999776664 233332 1236788999999954 4
Q ss_pred cccHHHHHHHHHHHHHHHhC
Q 004816 693 AENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 693 ~~~~~~~~~~~~~fl~~~l~ 712 (729)
-+....+.+.+.+||.+.-.
T Consensus 379 lE~Pe~~~~~l~~fl~~~~~ 398 (408)
T 3g02_A 379 LERPRELKTDLTAFVEQVWQ 398 (408)
T ss_dssp HHCHHHHHHHHHHHHHHHC-
T ss_pred hhCHHHHHHHHHHHHHHHHH
Confidence 46777889999999987643
No 260
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=99.22 E-value=1.7e-10 Score=114.02 Aligned_cols=197 Identities=11% Similarity=0.075 Sum_probs=121.2
Q ss_pred EEEEEcCCCCCCccccchhhhHHHhhCC---cEEEEecCCCCCC--CchhHH----Hhh----ccC--CC----cccHHH
Q 004816 494 LLVKSHGGPTSEARGILNLSIQYWTSRG---WAFVDVNYGGSTG--YGREFR----ERL----LGR--WG----IVDVND 554 (729)
Q Consensus 494 ~vv~~hGg~~~~~~~~~~~~~~~la~~G---~~v~~~d~rGs~g--~g~~~~----~~~----~~~--~~----~~~~~D 554 (729)
.||++||.. .....|..++..|++.| +.|+.+|+++.|. +...+. ... ..+ -+ ....++
T Consensus 6 pvv~iHG~~--~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~~ 83 (250)
T 3lp5_A 6 PVIMVPGSS--ASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVW 83 (250)
T ss_dssp CEEEECCCG--GGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHHH
T ss_pred CEEEECCCC--CCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHHH
Confidence 477799973 34456778889998876 6777776654331 000000 000 000 01 012577
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C-----CCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCC
Q 004816 555 CCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F-----RDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGS 628 (729)
Q Consensus 555 ~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~-----~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 628 (729)
+..++++|.++.. .+++.++||||||.+++.++. + +++++.+|++.+..+....... .....|
T Consensus 84 l~~~~~~l~~~~~--~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~~--~~~~~~------- 152 (250)
T 3lp5_A 84 LNTAFKALVKTYH--FNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTT--AKTSMF------- 152 (250)
T ss_dssp HHHHHHHHHTTSC--CSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCSS--CCCHHH-------
T ss_pred HHHHHHHHHHHcC--CCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccccc--ccCHHH-------
Confidence 8888898887743 478999999999999998886 5 6789999999876553321100 000000
Q ss_pred hhhhhhcCcccccCCCCCCEEEEEeC----CCCCCChHHHHHHHHHHHhCCCCEEEEEEC--CCCcccCCcccHHHHHHH
Q 004816 629 EKDYYEKSPINFVDKFSCPIILFQGL----EDKVVPPDQARKIYKALKENGLPVALVEYE--GEQHGFRKAENIKFTLEQ 702 (729)
Q Consensus 629 ~~~~~~~sp~~~~~~i~~PvL~i~G~----~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~--~~gH~~~~~~~~~~~~~~ 702 (729)
..+... ...+.+ ++|+|+|+|+ .|.+||.+.+..+...++........+.+. +++|.... ++. ++.+.
T Consensus 153 -~~l~~~--~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~-e~~-~v~~~ 226 (250)
T 3lp5_A 153 -KELYRY--RTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLP-QNK-QIVSL 226 (250)
T ss_dssp -HHHHHT--GGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHH-HHH-HHHHH
T ss_pred -HHHHhc--cccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcch-hCH-HHHHH
Confidence 111111 111222 6899999999 999999999988888877544444555555 46697532 332 66667
Q ss_pred HHHHHHH
Q 004816 703 QMVFFAR 709 (729)
Q Consensus 703 ~~~fl~~ 709 (729)
+.+||.+
T Consensus 227 I~~FL~~ 233 (250)
T 3lp5_A 227 IRQYLLA 233 (250)
T ss_dssp HHHHTSC
T ss_pred HHHHHhc
Confidence 7777644
No 261
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=99.22 E-value=4e-11 Score=120.81 Aligned_cols=198 Identities=10% Similarity=-0.010 Sum_probs=109.4
Q ss_pred CCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHH-HHHHhCCCCC
Q 004816 491 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCA-TFLVGSGKAD 569 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d 569 (729)
..|.||++||++++. ..|..+.. | ..+|.|+++|++|.+. +.. . ...++++.+.+ +.+.... .
T Consensus 20 ~~~~lv~lhg~~~~~--~~~~~~~~-l-~~~~~v~~~d~~G~~~-~~~----~-----~~~~~~~~~~~~~~i~~~~--~ 83 (265)
T 3ils_A 20 ARKTLFMLPDGGGSA--FSYASLPR-L-KSDTAVVGLNCPYARD-PEN----M-----NCTHGAMIESFCNEIRRRQ--P 83 (265)
T ss_dssp SSEEEEEECCTTCCG--GGGTTSCC-C-SSSEEEEEEECTTTTC-GGG----C-----CCCHHHHHHHHHHHHHHHC--S
T ss_pred CCCEEEEECCCCCCH--HHHHHHHh-c-CCCCEEEEEECCCCCC-CCC----C-----CCCHHHHHHHHHHHHHHhC--C
Confidence 457899999985443 44555566 4 6789999999998421 111 0 11233333222 2222221 2
Q ss_pred CCcEEEEEcChHHHHHHHHHh----CCCcceEEEEeccccChh---------HHhhhcchhhh--------------hhh
Q 004816 570 EKRLCITGGSAGGYTTLAALA----FRDTFKAGASLYGVADLS---------MLRAETHKFES--------------RYI 622 (729)
Q Consensus 570 ~~ri~i~G~S~GG~~a~~~~~----~~~~~~a~v~~~~~~d~~---------~~~~~~~~~~~--------------~~~ 622 (729)
.+++.++|||+||.+|+.++. ++++++++|+.++..... .+......... .+.
T Consensus 84 ~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
T 3ils_A 84 RGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPPSYLI 163 (265)
T ss_dssp SCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSCSCCCTTHH
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCCHHHHHHHH
Confidence 358999999999999988874 678899999887643210 00000000000 000
Q ss_pred hhhcCChhhhhhcCcccccCCCCCCEE-EEEeCC---CCCCC--------------hHHHHHHHHHHHhCCCCEEEEEEC
Q 004816 623 DNLVGSEKDYYEKSPINFVDKFSCPII-LFQGLE---DKVVP--------------PDQARKIYKALKENGLPVALVEYE 684 (729)
Q Consensus 623 ~~~~~~~~~~~~~sp~~~~~~i~~PvL-~i~G~~---D~~vp--------------~~~~~~~~~~l~~~g~~~~~~~~~ 684 (729)
..+..+......+.+ ....++++|++ +++|++ |..++ ......+.+.+. +.++++++++
T Consensus 164 ~~~~~~~~~~~~~~~-~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~--~~~~~~~~i~ 240 (265)
T 3ils_A 164 PHFTAVVDVMLDYKL-APLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMP--GASFDIVRAD 240 (265)
T ss_dssp HHHHHHHHHTTTCCC-CCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHST--TCCEEEEEEE
T ss_pred HHHHHHHHHHHhcCC-CCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCC--ccceeEEEcC
Confidence 000000000111111 12346889977 999999 98873 332333333221 1378999999
Q ss_pred CCCcccCC-cccHHHHHHHHHHHH
Q 004816 685 GEQHGFRK-AENIKFTLEQQMVFF 707 (729)
Q Consensus 685 ~~gH~~~~-~~~~~~~~~~~~~fl 707 (729)
|+||.+.. .+...+..+.+.+||
T Consensus 241 gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 241 GANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp EEETTGGGSTTTTHHHHHHHHHHT
T ss_pred CCCcceeeChhhHHHHHHHHHHHh
Confidence 99997641 355556666666664
No 262
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.22 E-value=7.4e-10 Score=116.84 Aligned_cols=243 Identities=10% Similarity=-0.044 Sum_probs=138.1
Q ss_pred cCCceEEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCC-CCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEE
Q 004816 145 YGGGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPD-YGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (729)
Q Consensus 145 ~~~~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~-~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l 223 (729)
.+..+.+++++.-++....++.|.+||+.+ ++...+... .......+...+|+|||++|+....+ ..|
T Consensus 95 ~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~--~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d---------g~v 163 (357)
T 4g56_B 95 AGVTDVAWVSEKGILVASDSGAVELWEILE--KESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD---------FSV 163 (357)
T ss_dssp SCEEEEEEETTTEEEEEETTSCEEEC----------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT---------SCE
T ss_pred CCEEEEEEcCCCCEEEEECCCEEEEeeccc--cceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC---------CeE
Confidence 344556666553334455678899999986 433221110 00012446788999999987766543 358
Q ss_pred EEEEcCCCceEEeee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccC
Q 004816 224 VAIALNGQNIQVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 302 (729)
Q Consensus 224 ~~~dl~~g~~~~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~ 302 (729)
.++|+.+++...... ........+|+||++.++.....+ ..|.++|+. +++........... ..+..
T Consensus 164 ~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d-------g~v~~wd~~-~~~~~~~~~~~~~~----~~v~~ 231 (357)
T 4g56_B 164 KVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGED-------GRILLWDTR-KPKPATRIDFCASD----TIPTS 231 (357)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETT-------SCEEECCTT-SSSCBCBCCCTTCC----SCEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccC-------CceEEEECC-CCceeeeeeecccc----ccccc
Confidence 889999887654433 345567789999997654444222 348888987 56532222222222 44567
Q ss_pred ceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEE
Q 004816 303 PKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 380 (729)
Q Consensus 303 ~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~l 380 (729)
+.|+|++. ++..... .+ .|.++|+.+++..... .....+. .+.|.+ +++.++++...++..+|
T Consensus 232 v~~sp~~~~~la~g~~-d~--~i~~wd~~~~~~~~~~~~~~~~v~---------~l~~sp---~~~~~lasgs~D~~i~i 296 (357)
T 4g56_B 232 VTWHPEKDDTFACGDE-TG--NVSLVNIKNPDSAQTSAVHSQNIT---------GLAYSY---HSSPFLASISEDCTVAV 296 (357)
T ss_dssp EEECTTSTTEEEEEES-SS--CEEEEESSCGGGCEEECCCSSCEE---------EEEECS---SSSCCEEEEETTSCEEE
T ss_pred hhhhhcccceEEEeec-cc--ceeEEECCCCcEeEEEeccceeEE---------EEEEcC---CCCCEEEEEeCCCEEEE
Confidence 89999976 6666544 33 4666788776543322 2222222 234433 66667777777786666
Q ss_pred EEEECCCCceEeeccCCcceEEe-ee-eCCEEEEEEeCCCCCceEEEEEcCC
Q 004816 381 GILDDFGHSLSLLDIPFTDIDNI-TL-GNDCLFVEGASGVEPSSVAKVTLDD 430 (729)
Q Consensus 381 y~~d~~~g~~~~lt~~~~~v~~~-~~-~~~~~~~~~~~~~~~~~ly~~d~~~ 430 (729)
| |+++++..........|..+ .. .++.+++.++.+ ..+.++++..
T Consensus 297 w--d~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~D---g~v~iW~~~~ 343 (357)
T 4g56_B 297 L--DADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWD---HKVLHHHLPS 343 (357)
T ss_dssp E--CTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETT---SCEEEEECC-
T ss_pred E--ECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCC---CeEEEEECCC
Confidence 5 77888766555555667777 33 355566655543 3455666544
No 263
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.20 E-value=1.4e-09 Score=113.14 Aligned_cols=221 Identities=11% Similarity=0.077 Sum_probs=129.9
Q ss_pred HHHHhccC-CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEE-CCEE
Q 004816 81 ADVVSGAS-KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF-GDTV 157 (729)
Q Consensus 81 ~e~i~~~~-~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~i 157 (729)
+|.+.... ...++|.|+| ++.+||++... + .|++++..+ ++.+.+.. + .....+.++ ++.+
T Consensus 40 ~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~---~--~i~~~d~~~-~~~~~~~~-~---------~~v~~i~~~~dg~l 103 (326)
T 2ghs_A 40 GRVLDETPMLLGEGPTFDPASGTAWWFNILE---R--ELHELHLAS-GRKTVHAL-P---------FMGSALAKISDSKQ 103 (326)
T ss_dssp CEEEECSCCSBEEEEEEETTTTEEEEEEGGG---T--EEEEEETTT-TEEEEEEC-S---------SCEEEEEEEETTEE
T ss_pred eEEeeccCCCCCcCCeEeCCCCEEEEEECCC---C--EEEEEECCC-CcEEEEEC-C---------CcceEEEEeCCCeE
Confidence 45555542 3458999999 89999998642 3 467776652 23222211 1 012223333 3345
Q ss_pred EEEECCCCcEEEEeCCCCCCCCeecCCCC-CCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEe
Q 004816 158 IFSNYKDQRLYKHSIDSKDSSPLPITPDY-GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVL 236 (729)
Q Consensus 158 ~~~~~~~~~l~~~d~~~~~~~~~~lt~~~-~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~l 236 (729)
++.. ...|+++++++ ++.+.+.... +....+..++.++|||+.++....... ......||+++ +++.+.+
T Consensus 104 ~v~~--~~gl~~~d~~~--g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~---~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 104 LIAS--DDGLFLRDTAT--GVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA---ETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp EEEE--TTEEEEEETTT--CCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC---CTTCEEEEEEE--TTEEEEE
T ss_pred EEEE--CCCEEEEECCC--CcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC---CCCceEEEEEe--CCcEEEe
Confidence 5544 34599999987 7766664321 112356788999999995433322111 11236799999 4777766
Q ss_pred eeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEec-CCC-CeeeeEEecCCC-CCccccccCceeCCCCcEEE
Q 004816 237 VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYIS-ENG-DVYKRVCVAGFD-PTIVESPTEPKWSSKGELFF 313 (729)
Q Consensus 237 t~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~-~~g-~~~~~~~~~~~~-~~~~~~~~~~~wspDG~l~~ 313 (729)
..+.....+++|||||+.|++.... ...|++++++ .+| ++.....+.... .. .....+.+++||.+++
T Consensus 175 ~~~~~~~~~i~~s~dg~~lyv~~~~-------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~--~~p~gi~~d~~G~lwv 245 (326)
T 2ghs_A 175 FADISIPNSICFSPDGTTGYFVDTK-------VNRLMRVPLDARTGLPTGKAEVFIDSTGIK--GGMDGSVCDAEGHIWN 245 (326)
T ss_dssp EEEESSEEEEEECTTSCEEEEEETT-------TCEEEEEEBCTTTCCBSSCCEEEEECTTSS--SEEEEEEECTTSCEEE
T ss_pred eCCCcccCCeEEcCCCCEEEEEECC-------CCEEEEEEcccccCCcccCceEEEECCCCC--CCCCeeEECCCCCEEE
Confidence 5544456688999999999887632 2469999985 245 433222222111 01 3345678899997655
Q ss_pred EEecCCCceEEEEEEcCCCeEEEee
Q 004816 314 VTDRKNGFWNLHKWIESNNEVLAIY 338 (729)
Q Consensus 314 ~~~~~~g~~~l~~~d~~~g~~~~l~ 338 (729)
.... ...|+++|+++...+.+.
T Consensus 246 a~~~---~~~v~~~d~~g~~~~~i~ 267 (326)
T 2ghs_A 246 ARWG---EGAVDRYDTDGNHIARYE 267 (326)
T ss_dssp EEET---TTEEEEECTTCCEEEEEE
T ss_pred EEeC---CCEEEEECCCCCEEEEEE
Confidence 4432 246899998554444443
No 264
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.17 E-value=1.3e-08 Score=114.47 Aligned_cols=223 Identities=13% Similarity=0.093 Sum_probs=142.2
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV 235 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~ 235 (729)
..+++...++.|.+|++.+ .....+... ...+...+|+|||+.|+....+ ..|.+++..+.....
T Consensus 316 ~~l~t~~~d~~i~~w~~~~--~~~~~~~~~----~~~v~~~~~s~~g~~l~~~~~d---------g~v~~~~~~~~~~~~ 380 (577)
T 2ymu_A 316 QTIASASDDKTVKLWNRNG--QHLQTLTGH----SSSVWGVAFSPDGQTIASASDD---------KTVKLWNRNGQLLQT 380 (577)
T ss_dssp SEEEEEETTSCEEEEETTS--CEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEEEETTCCEEEE
T ss_pred CEEEEEeCCCeEEEEeCCC--CeeEEEeCC----CCCEEEEEECCCCCEEEEEeCC---------CEEEEEcCCCCEEEE
Confidence 3444555677899999886 666666554 3456778899999988766543 357788876655556
Q ss_pred eeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEE
Q 004816 236 LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVT 315 (729)
Q Consensus 236 lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~ 315 (729)
+..........+|||||++|+..+. ...|.++|.. ++. ...+.+.. ..+..++|+||++++...
T Consensus 381 ~~~~~~~v~~~~~s~dg~~l~~~~~--------d~~v~~~~~~--~~~--~~~~~~~~----~~v~~~~~s~d~~~l~~~ 444 (577)
T 2ymu_A 381 LTGHSSSVRGVAFSPDGQTIASASD--------DKTVKLWNRN--GQL--LQTLTGHS----SSVWGVAFSPDDQTIASA 444 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEET--------TSEEEEECTT--CCE--EEEEECCS----SCEEEEEECTTSSEEEEE
T ss_pred ecCCCCCeEEEEECCCCCEEEEEeC--------CCEEEEEeCC--CCE--EEEecCCC----CCeEEEEECCCCCEEEEE
Confidence 6655566778899999999987662 2458888854 443 34445554 556678999999944444
Q ss_pred ecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeecc
Q 004816 316 DRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDI 395 (729)
Q Consensus 316 ~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~ 395 (729)
.. .+ .|.++|..+.....+......+.. +.|.+ +++ ++++...++...|| +.++...+.+..
T Consensus 445 ~~-d~--~v~~w~~~~~~~~~~~~~~~~v~~---------~~~sp---d~~-~las~~~d~~i~iw--~~~~~~~~~~~~ 506 (577)
T 2ymu_A 445 SD-DK--TVKLWNRNGQLLQTLTGHSSSVRG---------VAFSP---DGQ-TIASASDDKTVKLW--NRNGQLLQTLTG 506 (577)
T ss_dssp ET-TS--EEEEEETTSCEEEEEECCSSCEEE---------EEECT---TSC-EEEEEETTSEEEEE--ETTSCEEEEEEC
T ss_pred cC-CC--EEEEEECCCCEEEEEcCCCCCEEE---------EEEcC---CCC-EEEEEeCCCEEEEE--cCCCCEEEEEeC
Confidence 33 34 455667766555555544333333 33432 544 55566667766665 666666777776
Q ss_pred CCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCC
Q 004816 396 PFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDD 430 (729)
Q Consensus 396 ~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~ 430 (729)
....|..+ ..+++++++.++.. ..+.++|..+
T Consensus 507 h~~~v~~l~~s~dg~~l~s~~~d---g~v~lwd~~~ 539 (577)
T 2ymu_A 507 HSSSVRGVAFSPDGQTIASASDD---KTVKLWNRNG 539 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETT---SEEEEECTTS
T ss_pred CCCCEEEEEEcCCCCEEEEEECc---CEEEEEeCCC
Confidence 66778777 44555566555533 3577777543
No 265
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.17 E-value=1.5e-09 Score=111.76 Aligned_cols=256 Identities=11% Similarity=0.014 Sum_probs=146.9
Q ss_pred HHHHhccCCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC-CEEE
Q 004816 81 ADVVSGASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG-DTVI 158 (729)
Q Consensus 81 ~e~i~~~~~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~i~ 158 (729)
+|.|.......++|.|+| |+.++|++.. +++ |++++.+ |+.+.+.... + ....+.++. +.++
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~---~~~--i~~~~~~--g~~~~~~~~~-~--------~~~gl~~d~dG~l~ 100 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLV---GRR--VLGWRED--GTVDVLLDAT-A--------FTNGNAVDAQQRLV 100 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETT---TTE--EEEEETT--SCEEEEEESC-S--------CEEEEEECTTSCEE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECC---CCE--EEEEeCC--CCEEEEeCCC-C--------ccceeeECCCCCEE
Confidence 455555555668999999 8889999863 344 5555554 2333222111 0 112233442 3555
Q ss_pred EEECCCCcEEEEeCCCCCCCCeecCCCCCC-CceeeecceecCCCCEEEEEEeccC---------CCCCCcceEEEEEEc
Q 004816 159 FSNYKDQRLYKHSIDSKDSSPLPITPDYGE-PLVSYADGIFDPRFNRYVTVREDRR---------QDALNSTTEIVAIAL 228 (729)
Q Consensus 159 ~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~-~~~~~~~~~~SPdG~~l~~~~~~~~---------~~~~~~~~~l~~~dl 228 (729)
+.....+.|++++.+ ++.+.+...... .....++++++|||+ |+++..... .........||+++.
T Consensus 101 v~~~~~~~v~~~~~~---g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~ 176 (305)
T 3dr2_A 101 HCEHGRRAITRSDAD---GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP 176 (305)
T ss_dssp EEETTTTEEEEECTT---SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred EEECCCCEEEEECCC---CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence 555555689999986 445555432110 012346789999998 344311000 001112367999999
Q ss_pred CCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCC
Q 004816 229 NGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK 308 (729)
Q Consensus 229 ~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspD 308 (729)
++++.+.+. +.....+++|||||+.|++...... +.....|++++++ ++.+.....+.... . .....+.+++|
T Consensus 177 ~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~--~~~~~~i~~~~~~-~~~l~~~~~~~~~~-~--~~pdgi~~d~~ 249 (305)
T 3dr2_A 177 DGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQ--GHGSVEITAFAWR-DGALHDRRHFASVP-D--GLPDGFCVDRG 249 (305)
T ss_dssp SSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC-----CCCEEEEEEEE-TTEEEEEEEEECCS-S--SCCCSEEECTT
T ss_pred CCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCc--CCCCCEEEEEEec-CCCccCCeEEEECC-C--CCCCeEEECCC
Confidence 888888776 5455678899999999987764321 0013569999998 44344344443321 1 44567889999
Q ss_pred CcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEEC
Q 004816 309 GELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 385 (729)
Q Consensus 309 G~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~ 385 (729)
|+|++.. . . .|+++++++.....+.... .. ..+.|.+ +++.|++++. + .||++++
T Consensus 250 G~lwv~~-~-~---gv~~~~~~g~~~~~~~~~~-~~---------~~~~f~~---d~~~L~it~~-~---~l~~~~~ 304 (305)
T 3dr2_A 250 GWLWSSS-G-T---GVCVFDSDGQLLGHIPTPG-TA---------SNCTFDQ---AQQRLFITGG-P---CLWMLPL 304 (305)
T ss_dssp SCEEECC-S-S---EEEEECTTSCEEEEEECSS-CC---------CEEEECT---TSCEEEEEET-T---EEEEEEC
T ss_pred CCEEEec-C-C---cEEEECCCCCEEEEEECCC-ce---------eEEEEeC---CCCEEEEEcC-C---eEEEEEC
Confidence 9855443 3 2 4999999766555554221 11 2334432 6667776653 2 5777654
No 266
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.17 E-value=1e-08 Score=108.46 Aligned_cols=199 Identities=10% Similarity=-0.023 Sum_probs=121.0
Q ss_pred eecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEE
Q 004816 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAEL 272 (729)
Q Consensus 193 ~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l 272 (729)
....+|||||+.++...... ...|.++|+.+++..............+|||||++|+..+ + ..+
T Consensus 136 ~~~v~fSpDg~~la~as~~~-------d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s-~--------~~~ 199 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKV-------PAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT-G--------SSL 199 (365)
T ss_dssp EEEEEECTTSSCEEEEESCS-------SCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC-S--------SCE
T ss_pred EEEEEEcCCCCEEEEEECCC-------CCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc-c--------eeE
Confidence 34578999999887655332 1468999999987765555555677899999999998765 2 126
Q ss_pred EEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEEe-----eccCccccC
Q 004816 273 WVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAI-----YSLDAEFSR 346 (729)
Q Consensus 273 ~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l-----~~~~~~~~~ 346 (729)
.+++.. ++............ ..+..++|+|||+ ++..+........++.++...+....+ ......+
T Consensus 200 ~~~~~~-~~~~~~~~~~~~~~----~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V-- 272 (365)
T 4h5i_A 200 EVISTV-TGSCIARKTDFDKN----WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGI-- 272 (365)
T ss_dssp EEEETT-TCCEEEEECCCCTT----EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCE--
T ss_pred EEEEec-cCcceeeeecCCCC----CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCe--
Confidence 677766 55532222223333 4567789999999 555554423344677777766554322 2222122
Q ss_pred CcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceE-ee-ccCCcceEEe-eeeCCEEEEEEeCCCCCceE
Q 004816 347 PLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LL-DIPFTDIDNI-TLGNDCLFVEGASGVEPSSV 423 (729)
Q Consensus 347 ~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~-~l-t~~~~~v~~~-~~~~~~~~~~~~~~~~~~~l 423 (729)
..+.|.| +++ ++++...++...|| |+.+++.. .+ ......|..+ ..+++.+++.++.+. .+
T Consensus 273 -------~~~~~Sp---dg~-~lasgs~D~~V~iw--d~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~---tv 336 (365)
T 4h5i_A 273 -------TSMDVDM---KGE-LAVLASNDNSIALV--KLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAAN---TI 336 (365)
T ss_dssp -------EEEEECT---TSC-EEEEEETTSCEEEE--ETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTS---EE
T ss_pred -------EeEEECC---CCC-ceEEEcCCCEEEEE--ECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCC---eE
Confidence 2344443 554 55566667765555 77777643 33 3446678888 556666766666443 44
Q ss_pred EEEEcCC
Q 004816 424 AKVTLDD 430 (729)
Q Consensus 424 y~~d~~~ 430 (729)
.++++..
T Consensus 337 rvw~ip~ 343 (365)
T 4h5i_A 337 HIIKLPL 343 (365)
T ss_dssp EEEECCT
T ss_pred EEEEcCC
Confidence 5555543
No 267
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=99.14 E-value=8.7e-11 Score=116.49 Aligned_cols=196 Identities=13% Similarity=0.144 Sum_probs=108.0
Q ss_pred CCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCC-C
Q 004816 491 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKA-D 569 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~-d 569 (729)
..|.||++||.+++ ...|...+..|.+ +|.|+++|+||.|.+... ..+|+.+.++.+.+.-.+ .
T Consensus 12 ~~~~lv~lhg~g~~--~~~~~~~~~~L~~-~~~vi~~Dl~GhG~S~~~------------~~~~~~~~~~~~~~~l~~~~ 76 (242)
T 2k2q_B 12 EKTQLICFPFAGGY--SASFRPLHAFLQG-ECEMLAAEPPGHGTNQTS------------AIEDLEELTDLYKQELNLRP 76 (242)
T ss_dssp CCCEEESSCCCCHH--HHHHHHHHHHHCC-SCCCEEEECCSSCCSCCC------------TTTHHHHHHHHTTTTCCCCC
T ss_pred CCceEEEECCCCCC--HHHHHHHHHhCCC-CeEEEEEeCCCCCCCCCC------------CcCCHHHHHHHHHHHHHhhc
Confidence 34678999997433 3456777777754 799999999976643211 145777777776654222 2
Q ss_pred CCcEEEEEcChHHHHHHHHHh-------CCCcceEEEEeccccCh--------hHHhhhcch---hhhh------hhhhh
Q 004816 570 EKRLCITGGSAGGYTTLAALA-------FRDTFKAGASLYGVADL--------SMLRAETHK---FESR------YIDNL 625 (729)
Q Consensus 570 ~~ri~i~G~S~GG~~a~~~~~-------~~~~~~a~v~~~~~~d~--------~~~~~~~~~---~~~~------~~~~~ 625 (729)
.+++.++||||||.+|+.++. +|+++-......+.... ..+...... .... .....
T Consensus 77 ~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (242)
T 2k2q_B 77 DRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKEVMSFF 156 (242)
T ss_dssp CSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTTHHHHTTTTC
T ss_pred CCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHH
Confidence 368999999999999998875 45553111111111100 000000000 0000 00000
Q ss_pred cCC-hhhhhh---cCcccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHH
Q 004816 626 VGS-EKDYYE---KSPINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLE 701 (729)
Q Consensus 626 ~~~-~~~~~~---~sp~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~ 701 (729)
... ...+.. ... ..+.++++|+|+++|++|..++ .... .+++.-...+++++++ ||.+. .+...++.+
T Consensus 157 ~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~G~~D~~~~-~~~~----~~~~~~~~~~~~~~~~-gH~~~-~e~p~~~~~ 228 (242)
T 2k2q_B 157 LPSFRSDYRALEQFEL-YDLAQIQSPVHVFNGLDDKKCI-RDAE----GWKKWAKDITFHQFDG-GHMFL-LSQTEEVAE 228 (242)
T ss_dssp CSCHHHHHHHHTCCCC-SCCTTCCCSEEEEEECSSCCHH-HHHH----HHHTTCCCSEEEEEEC-CCSHH-HHHCHHHHH
T ss_pred HHHHHHHHHHHHhccc-CCCCccCCCEEEEeeCCCCcCH-HHHH----HHHHHhcCCeEEEEeC-CceeE-cCCHHHHHH
Confidence 000 011111 111 1256789999999999998753 2232 2333222335778875 89653 344567778
Q ss_pred HHHHHHHH
Q 004816 702 QQMVFFAR 709 (729)
Q Consensus 702 ~~~~fl~~ 709 (729)
.+.+|+.+
T Consensus 229 ~i~~fl~~ 236 (242)
T 2k2q_B 229 RIFAILNQ 236 (242)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhhc
Confidence 88888865
No 268
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.14 E-value=1e-08 Score=115.36 Aligned_cols=211 Identities=13% Similarity=0.094 Sum_probs=133.7
Q ss_pred EEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEe
Q 004816 157 VIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVL 236 (729)
Q Consensus 157 i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~l 236 (729)
.+.....++.|.+++..+ .....+... ...+...+|||||++|+....+ ..|.+++..+...+.+
T Consensus 358 ~l~~~~~dg~v~~~~~~~--~~~~~~~~~----~~~v~~~~~s~dg~~l~~~~~d---------~~v~~~~~~~~~~~~~ 422 (577)
T 2ymu_A 358 TIASASDDKTVKLWNRNG--QLLQTLTGH----SSSVRGVAFSPDGQTIASASDD---------KTVKLWNRNGQLLQTL 422 (577)
T ss_dssp EEEEEETTSEEEEEETTC--CEEEEEECC----SSCEEEEEECTTSSCEEEEETT---------SEEEEECTTCCEEEEE
T ss_pred EEEEEeCCCEEEEEcCCC--CEEEEecCC----CCCeEEEEECCCCCEEEEEeCC---------CEEEEEeCCCCEEEEe
Confidence 344445677899999765 545555544 3456778999999988766543 3588888765555566
Q ss_pred eeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEe
Q 004816 237 VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTD 316 (729)
Q Consensus 237 t~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~ 316 (729)
..........+||||+++|+..+. ...|.++|+. ++. ...+.+.. ..+..++|+|||+++....
T Consensus 423 ~~~~~~v~~~~~s~d~~~l~~~~~--------d~~v~~w~~~--~~~--~~~~~~~~----~~v~~~~~spd~~~las~~ 486 (577)
T 2ymu_A 423 TGHSSSVWGVAFSPDDQTIASASD--------DKTVKLWNRN--GQL--LQTLTGHS----SSVRGVAFSPDGQTIASAS 486 (577)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEET--------TSEEEEEETT--SCE--EEEEECCS----SCEEEEEECTTSCEEEEEE
T ss_pred cCCCCCeEEEEECCCCCEEEEEcC--------CCEEEEEECC--CCE--EEEEcCCC----CCEEEEEEcCCCCEEEEEe
Confidence 555566778899999999987662 3458888865 443 33444554 5567789999999555544
Q ss_pred cCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccC
Q 004816 317 RKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIP 396 (729)
Q Consensus 317 ~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~ 396 (729)
. .+ .|.++|..+...+.+......+.. +.|.+ +++ ++++...+|...|| |..+..+..+...
T Consensus 487 ~-d~--~i~iw~~~~~~~~~~~~h~~~v~~---------l~~s~---dg~-~l~s~~~dg~v~lw--d~~~~~~~~~~~h 548 (577)
T 2ymu_A 487 D-DK--TVKLWNRNGQLLQTLTGHSSSVRG---------VAFSP---DGQ-TIASASDDKTVKLW--NRNGQLLQTLTGH 548 (577)
T ss_dssp T-TS--EEEEEETTSCEEEEEECCSSCEEE---------EEECT---TSS-CEEEEETTSEEEEE--CTTSCEEEEEECC
T ss_pred C-CC--EEEEEcCCCCEEEEEeCCCCCEEE---------EEEcC---CCC-EEEEEECcCEEEEE--eCCCCEEEEEcCC
Confidence 4 34 455667655555555433333333 34442 555 45566677766665 6666666667666
Q ss_pred CcceEEe-eeeCCEEEEEEeC
Q 004816 397 FTDIDNI-TLGNDCLFVEGAS 416 (729)
Q Consensus 397 ~~~v~~~-~~~~~~~~~~~~~ 416 (729)
...|..+ ..+++++++.++.
T Consensus 549 ~~~v~~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 549 SSSVWGVAFSPDGQTIASASS 569 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEET
T ss_pred CCCEEEEEEcCCCCEEEEEeC
Confidence 6677777 4445555555553
No 269
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.13 E-value=1.3e-08 Score=109.34 Aligned_cols=279 Identities=11% Similarity=0.066 Sum_probs=160.4
Q ss_pred CceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEEEE
Q 004816 92 GGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKH 170 (729)
Q Consensus 92 ~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~ 170 (729)
..+.|+| ++.++.... ++...+|..... +....+... ... ....+.++++. +++...++.|.+|
T Consensus 60 ~~~~~s~~g~~l~~~~~----d~~v~i~d~~~~---~~~~~~~~~-~~~------~~~~~~~~~~~-l~~~~~dg~i~iw 124 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARL----DGHDFLFNTIIR---DGSKMLKRA-DYT------AVDTAKLQMRR-FILGTTEGDIKVL 124 (420)
T ss_dssp TTCEEEEEETTEEEEEE----TTEEEEEECCSE---ETTTTSCSC-CEE------EEEEECSSSCE-EEEEETTSCEEEE
T ss_pred cceeeeecCCeEEEEEc----CCcEEEEEeccc---ceeeEEecC-Cce------EEEEEecCCCE-EEEEECCCCEEEE
Confidence 4789999 888877653 466666765332 222222111 000 01122223334 4455567889999
Q ss_pred eCCCCCCCCeecC-CCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce-EEeeeCCCeeeeeee
Q 004816 171 SIDSKDSSPLPIT-PDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI-QVLVSGSDFYAFPRM 248 (729)
Q Consensus 171 d~~~~~~~~~~lt-~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~-~~lt~~~~~~~~~~~ 248 (729)
++.+ ++...+. .. ...+...+|+|||+.|+....+ ..|.++|+.+++. +.+..........+|
T Consensus 125 d~~~--~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~d---------~~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 189 (420)
T 3vl1_A 125 DSNF--NLQREIDQAH----VSEITKLKFFPSGEALISSSQD---------MQLKIWSVKDGSNPRTLIGHRATVTDIAI 189 (420)
T ss_dssp CTTS--CEEEEETTSS----SSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCCCEEEECCSSCEEEEEE
T ss_pred eCCC--cceeeecccc----cCccEEEEECCCCCEEEEEeCC---------CeEEEEeCCCCcCceEEcCCCCcEEEEEE
Confidence 9987 6554443 33 3567888999999987766543 4699999988764 445445566778999
Q ss_pred CCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCC-C-Cc------------------cccccCceeCCC
Q 004816 249 DPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD-P-TI------------------VESPTEPKWSSK 308 (729)
Q Consensus 249 SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~-~-~~------------------~~~~~~~~wspD 308 (729)
+|||+.|+..+. ...|.++|+. +++. ...+.... . .. ...+..+.|+||
T Consensus 190 ~~~~~~l~s~~~--------d~~v~iwd~~-~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 258 (420)
T 3vl1_A 190 IDRGRNVLSASL--------DGTIRLWECG-TGTT--IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY 258 (420)
T ss_dssp ETTTTEEEEEET--------TSCEEEEETT-TTEE--EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT
T ss_pred cCCCCEEEEEcC--------CCcEEEeECC-CCce--eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC
Confidence 999999886662 2348888887 5653 22222110 0 00 033456889999
Q ss_pred CcEEEEEecCCCceEEEEEEcCCCeEEEee-c-cCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECC
Q 004816 309 GELFFVTDRKNGFWNLHKWIESNNEVLAIY-S-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDF 386 (729)
Q Consensus 309 G~l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~-~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~ 386 (729)
|++++.... .| .|.++|+.+++..... . ....+.. +.|.+ +++.++++...+|...|| |+.
T Consensus 259 ~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~v~~---------~~~~~---~~~~~l~~g~~dg~i~vw--d~~ 321 (420)
T 3vl1_A 259 GKYVIAGHV-SG--VITVHNVFSKEQTIQLPSKFTCSCNS---------LTVDG---NNANYIYAGYENGMLAQW--DLR 321 (420)
T ss_dssp TEEEEEEET-TS--CEEEEETTTCCEEEEECCTTSSCEEE---------EEECS---SCTTEEEEEETTSEEEEE--ETT
T ss_pred CCEEEEEcC-CC--eEEEEECCCCceeEEcccccCCCcee---------EEEeC---CCCCEEEEEeCCCeEEEE--EcC
Confidence 995555444 34 3666788776544333 1 1222222 33432 555466677777765555 666
Q ss_pred CCc--eEeecc-CCcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCC
Q 004816 387 GHS--LSLLDI-PFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDH 431 (729)
Q Consensus 387 ~g~--~~~lt~-~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~ 431 (729)
+++ ...+.. ....+..+...++.+++.++. + ..+.++++...
T Consensus 322 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~-d--~~v~iw~~~~~ 366 (420)
T 3vl1_A 322 SPECPVGEFLINEGTPINNVYFAAGALFVSSGF-D--TSIKLDIISDP 366 (420)
T ss_dssp CTTSCSEEEEESTTSCEEEEEEETTEEEEEETT-T--EEEEEEEECCT
T ss_pred CCcCchhhhhccCCCCceEEEeCCCCEEEEecC-C--ccEEEEeccCC
Confidence 653 345544 344566664445565555442 2 35666665553
No 270
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.13 E-value=3.5e-09 Score=111.97 Aligned_cols=167 Identities=7% Similarity=-0.057 Sum_probs=89.8
Q ss_pred EEECCEEEEEECCCCcEEEEeCC-CCCCCCeecCCCCCCCceeeecceecCCCCEE-EEEEeccCCCCC-C----cceEE
Q 004816 151 RIFGDTVIFSNYKDQRLYKHSID-SKDSSPLPITPDYGEPLVSYADGIFDPRFNRY-VTVREDRRQDAL-N----STTEI 223 (729)
Q Consensus 151 ~~~~~~i~~~~~~~~~l~~~d~~-~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l-~~~~~~~~~~~~-~----~~~~l 223 (729)
+++++.++..+. + .|.+++++ + ++..++..... ......++|||||++| +++.+....... . ....+
T Consensus 48 spdg~~l~~~~~-~-~v~~~~~~~~--g~~~~~~~~~~--~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v 121 (365)
T 1jof_A 48 DHERKNIYGAAM-K-KWSSFAVKSP--TEIVHEASHPI--GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYG 121 (365)
T ss_dssp CTTSSEEEEEEB-T-EEEEEEEEET--TEEEEEEEEEC--CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEE
T ss_pred CCCCCEEEEEcc-c-eEEEEEECCC--CCEEEeeEeec--CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceE
Confidence 333445544443 3 78888886 5 55444322100 0113557899999974 445430000000 0 01345
Q ss_pred EEEEcC-CCceE-Eeee----CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEec--CCCCC
Q 004816 224 VAIALN-GQNIQ-VLVS----GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA--GFDPT 295 (729)
Q Consensus 224 ~~~dl~-~g~~~-~lt~----~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~--~~~~~ 295 (729)
.+++++ .|+.. .+.. ......+++|||||++|+.... ....|++++++.+|+........ ...
T Consensus 122 ~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~-------~~~~v~~~~~~~~g~~~~~~~~~~~~~g-- 192 (365)
T 1jof_A 122 NVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL-------TANKLWTHRKLASGEVELVGSVDAPDPG-- 192 (365)
T ss_dssp EEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET-------TTTEEEEEEECTTSCEEEEEEEECSSTT--
T ss_pred EEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC-------CCCEEEEEEECCCCCEEEeeeEecCCCC--
Confidence 666665 35443 2321 3345667899999998865542 12469999986335543322222 112
Q ss_pred ccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeE
Q 004816 296 IVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEV 334 (729)
Q Consensus 296 ~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~ 334 (729)
..+..+.|+|||+.+|+.....+.-.+|.++.++|+.
T Consensus 193 --~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 193 --DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp --CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred --CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence 3456679999999444444324556677777767764
No 271
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=99.12 E-value=5.5e-10 Score=113.00 Aligned_cols=103 Identities=17% Similarity=0.073 Sum_probs=67.8
Q ss_pred EEEEEcCCCCCCcc-ccchhhhHHHhhC--CcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCC
Q 004816 494 LLVKSHGGPTSEAR-GILNLSIQYWTSR--GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 570 (729)
Q Consensus 494 ~vv~~hGg~~~~~~-~~~~~~~~~la~~--G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 570 (729)
.||++||...+... ..|....+.|.+. ||.|+++|+ |.+....... ... ....+++..+++++...... .
T Consensus 7 pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~-~~~----~~~~~~~~~~~~~l~~~~~l-~ 79 (279)
T 1ei9_A 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVEN-SFF----LNVNSQVTTVCQILAKDPKL-Q 79 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHH-HHH----SCHHHHHHHHHHHHHSCGGG-T
T ss_pred cEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCcccccc-ccc----cCHHHHHHHHHHHHHhhhhc-c
Confidence 38899997544322 4677788888775 899999997 5442211111 111 11134445555555442212 2
Q ss_pred CcEEEEEcChHHHHHHHHHh-CCC-cceEEEEecc
Q 004816 571 KRLCITGGSAGGYTTLAALA-FRD-TFKAGASLYG 603 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~-~~~-~~~a~v~~~~ 603 (729)
+++.++||||||.++..++. +|+ +++..|+.++
T Consensus 80 ~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~ 114 (279)
T 1ei9_A 80 QGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGG 114 (279)
T ss_dssp TCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESC
T ss_pred CCEEEEEECHHHHHHHHHHHHcCCcccceEEEecC
Confidence 68999999999999999998 887 4999998775
No 272
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.12 E-value=2.3e-08 Score=103.91 Aligned_cols=260 Identities=13% Similarity=0.097 Sum_probs=145.0
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCC---
Q 004816 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKD--- 164 (729)
Q Consensus 89 ~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~--- 164 (729)
..++++.|+|.+.+||+... ++ .|++++..+ ++.+.+.... ......+.++.+ .+++....+
T Consensus 45 ~~~~~~~~~~~g~l~~~~~~---~~--~i~~~d~~~-~~~~~~~~~~--------~~~~~~i~~~~dg~l~v~~~~~~~~ 110 (333)
T 2dg1_A 45 LQLEGLNFDRQGQLFLLDVF---EG--NIFKINPET-KEIKRPFVSH--------KANPAAIKIHKDGRLFVCYLGDFKS 110 (333)
T ss_dssp CCEEEEEECTTSCEEEEETT---TC--EEEEECTTT-CCEEEEEECS--------SSSEEEEEECTTSCEEEEECTTSSS
T ss_pred ccccCcEECCCCCEEEEECC---CC--EEEEEeCCC-CcEEEEeeCC--------CCCcceEEECCCCcEEEEeCCCCCC
Confidence 45689999995558887652 23 466676652 3444333111 011223444433 555555444
Q ss_pred -CcEEEEeCCCCCCCCeec-CCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCe
Q 004816 165 -QRLYKHSIDSKDSSPLPI-TPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDF 242 (729)
Q Consensus 165 -~~l~~~d~~~~~~~~~~l-t~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~ 242 (729)
+.|+++++++ +..+.+ .... ......++.++|||+.++....... ......||+++.++++.+.+......
T Consensus 111 ~~~i~~~d~~~--~~~~~~~~~~~--~~~~~~~i~~d~~g~l~v~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~ 183 (333)
T 2dg1_A 111 TGGIFAATENG--DNLQDIIEDLS--TAYCIDDMVFDSKGGFYFTDFRGYS---TNPLGGVYYVSPDFRTVTPIIQNISV 183 (333)
T ss_dssp CCEEEEECTTS--CSCEEEECSSS--SCCCEEEEEECTTSCEEEEECCCBT---TBCCEEEEEECTTSCCEEEEEEEESS
T ss_pred CceEEEEeCCC--CEEEEEEccCc--cCCcccceEECCCCCEEEEeccccc---cCCCceEEEEeCCCCEEEEeecCCCc
Confidence 5899999987 665533 3211 1245678899999985433221110 01136799999988888777654445
Q ss_pred eeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCC-eeee--EEecCCCCCccccccCceeCCCCcEEEEEecCC
Q 004816 243 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD-VYKR--VCVAGFDPTIVESPTEPKWSSKGELFFVTDRKN 319 (729)
Q Consensus 243 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~-~~~~--~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~ 319 (729)
..+++|+|||+.|++.... ...|+++|++.++. .... ......... ..+..+.+++||++++....
T Consensus 184 ~~~i~~~~dg~~l~v~~~~-------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~d~~G~l~v~~~~-- 252 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTETT-------ANRLHRIALEDDGVTIQPFGATIPYYFTGH--EGPDSCCIDSDDNLYVAMYG-- 252 (333)
T ss_dssp EEEEEECTTSSEEEEEEGG-------GTEEEEEEECTTSSSEEEEEEEEEEECCSS--SEEEEEEEBTTCCEEEEEET--
T ss_pred ccceEECCCCCEEEEEeCC-------CCeEEEEEecCCCcCcccccceEEEecCCC--CCCCceEECCCCCEEEEEcC--
Confidence 5678999999988877532 34699999862233 2111 111111100 23456789999986555433
Q ss_pred CceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEEC---CeEEEEEEECCC
Q 004816 320 GFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN---GRSYLGILDDFG 387 (729)
Q Consensus 320 g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~---g~~~ly~~d~~~ 387 (729)
...|+++|+++...+.+.......+.. .....+.|.+ +++.||+++... ....||++++..
T Consensus 253 -~~~v~~~d~~g~~~~~~~~~~~~~g~~---~~~~~~~~~~---dg~~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 253 -QGRVLVFNKRGYPIGQILIPGRDEGHM---LRSTHPQFIP---GTNQLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp -TTEEEEECTTSCEEEEEECTTGGGTCS---CBCCEEEECT---TSCEEEEEEECGGGTCCEEEEEEECSS
T ss_pred -CCEEEEECCCCCEEEEEEcCCCccccc---cCcceEEECC---CCCEEEEEeCccCCCCCceEEEEeccc
Confidence 246888898655445443211100000 0112334432 666787777652 346788887653
No 273
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.11 E-value=5.3e-09 Score=113.96 Aligned_cols=250 Identities=8% Similarity=0.063 Sum_probs=150.6
Q ss_pred eEEEE--CCEEEEEECCCCcEEEEeCC--CCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEE
Q 004816 149 AFRIF--GDTVIFSNYKDQRLYKHSID--SKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (729)
Q Consensus 149 ~~~~~--~~~i~~~~~~~~~l~~~d~~--~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l 223 (729)
+..++ +..++++...++.|.+|++. + +.. +.+.... ....+..++|+|||++|+....+ ..+
T Consensus 107 ~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~~---------g~v 173 (450)
T 2vdu_B 107 NLRLTSDESRLIACADSDKSLLVFDVDKTS--KNVLKLRKRFC--FSKRPNAISIAEDDTTVIIADKF---------GDV 173 (450)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECSSS--SSCEEEEEEEE--CSSCEEEEEECTTSSEEEEEETT---------SEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEECcCCC--Cceeeeeeccc--CCCCceEEEEcCCCCEEEEEeCC---------CcE
Confidence 34444 44566777778889999987 6 433 3333110 02346788999999988766442 568
Q ss_pred EEEEcCCCceE-----EeeeCCCeeeeeeeCCC---CCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCC
Q 004816 224 VAIALNGQNIQ-----VLVSGSDFYAFPRMDPR---GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPT 295 (729)
Q Consensus 224 ~~~dl~~g~~~-----~lt~~~~~~~~~~~SPD---G~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~ 295 (729)
+++++.+++.. .+..........+|+|| |++|+..+. ...|+++|+. +++.. .....+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~--------d~~i~vwd~~-~~~~~-~~~~~~h~-- 241 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR--------DEHIKISHYP-QCFIV-DKWLFGHK-- 241 (450)
T ss_dssp EEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET--------TSCEEEEEES-CTTCE-EEECCCCS--
T ss_pred EEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC--------CCcEEEEECC-CCcee-eeeecCCC--
Confidence 99999876543 33334456677899999 888876652 2348999998 66542 22244444
Q ss_pred ccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccC-----------------CcccccCcceee
Q 004816 296 IVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSR-----------------PLWVFGINSYEI 358 (729)
Q Consensus 296 ~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~-----------------~~w~~~~~~~~~ 358 (729)
..+..+.|+ ||++++.... .+ .|.++|+.+++............. .........+.+
T Consensus 242 --~~v~~~~~s-d~~~l~s~~~-d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 242 --HFVSSICCG-KDYLLLSAGG-DD--KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp --SCEEEEEEC-STTEEEEEES-SS--EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred --CceEEEEEC-CCCEEEEEeC-CC--eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 566788999 9985444443 33 577778888875443321100000 011112234555
Q ss_pred eeecCCCCEEEEEEEECCeEEEEEE-ECCCCceE---eeccCCcceEEeeeeCCEEEEEEeCCCCCc------eEEEEEc
Q 004816 359 IQSHGEKNLIACSYRQNGRSYLGIL-DDFGHSLS---LLDIPFTDIDNITLGNDCLFVEGASGVEPS------SVAKVTL 428 (729)
Q Consensus 359 l~~~~~~~~l~~~s~~~g~~~ly~~-d~~~g~~~---~lt~~~~~v~~~~~~~~~~~~~~~~~~~~~------~ly~~d~ 428 (729)
.+ +++.++..+..++...||.+ +..++.++ .+..+ ..+..+....+.+++...+.+.+. ++|.++.
T Consensus 316 ~~---~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 316 SK---NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp CS---SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred eC---CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 53 66666666646787778777 33343333 33333 566777333366777777766554 7899988
Q ss_pred CCCcc
Q 004816 429 DDHKL 433 (729)
Q Consensus 429 ~~~~~ 433 (729)
.+++.
T Consensus 392 ~~~~~ 396 (450)
T 2vdu_B 392 NENSF 396 (450)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 77765
No 274
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.10 E-value=5.6e-08 Score=99.92 Aligned_cols=269 Identities=11% Similarity=0.051 Sum_probs=154.3
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCc
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQR 166 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~ 166 (729)
..+..+.|+| ++.++--. .++...+|....+ +....+.. +..+.....++++ ..+++...++.
T Consensus 24 ~~v~~~~~s~~~~~l~s~~----~dg~i~iw~~~~~---~~~~~~~~--------h~~~v~~~~~~~~~~~l~s~~~d~~ 88 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSS----ADKLIKIWGAYDG---KFEKTISG--------HKLGISDVAWSSDSNLLVSASDDKT 88 (312)
T ss_dssp SCEEEEEECTTSSEEEEEE----TTSCEEEEETTTC---CEEEEECC--------CSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CcEEEEEECCCCCEEEEee----CCCeEEEEeCCCc---ccchhhcc--------CCCceEEEEEcCCCCEEEEECCCCE
Confidence 4567899999 66554432 3567777865433 22222211 1222334444433 45555567889
Q ss_pred EEEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE-EeeeCCCeee
Q 004816 167 LYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-VLVSGSDFYA 244 (729)
Q Consensus 167 l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~-~lt~~~~~~~ 244 (729)
|.+||+.+ ++. ..+... ...+....|+|+|+.|+....+ ..|.++|+.+++.. .+........
T Consensus 89 i~vwd~~~--~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~d---------~~i~iwd~~~~~~~~~~~~~~~~v~ 153 (312)
T 4ery_A 89 LKIWDVSS--GKCLKTLKGH----SNYVFCCNFNPQSNLIVSGSFD---------ESVRIWDVKTGKCLKTLPAHSDPVS 153 (312)
T ss_dssp EEEEETTT--CCEEEEEECC----SSCEEEEEECSSSSEEEEEETT---------SCEEEEETTTCCEEEEECCCSSCEE
T ss_pred EEEEECCC--CcEEEEEcCC----CCCEEEEEEcCCCCEEEEEeCC---------CcEEEEECCCCEEEEEecCCCCcEE
Confidence 99999987 543 334333 3446778899999987766543 35889999987654 3444445667
Q ss_pred eeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEE
Q 004816 245 FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNL 324 (729)
Q Consensus 245 ~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l 324 (729)
...|+|||+.|+..+. ...|.++|+. +++.. ..+..... ..+..+.|+|||++++.... .+ .|
T Consensus 154 ~~~~~~~~~~l~~~~~--------d~~i~~wd~~-~~~~~-~~~~~~~~----~~~~~~~~~~~~~~l~~~~~-d~--~i 216 (312)
T 4ery_A 154 AVHFNRDGSLIVSSSY--------DGLCRIWDTA-SGQCL-KTLIDDDN----PPVSFVKFSPNGKYILAATL-DN--TL 216 (312)
T ss_dssp EEEECTTSSEEEEEET--------TSCEEEEETT-TCCEE-EEECCSSC----CCEEEEEECTTSSEEEEEET-TT--EE
T ss_pred EEEEcCCCCEEEEEeC--------CCcEEEEECC-CCcee-eEEeccCC----CceEEEEECCCCCEEEEEcC-CC--eE
Confidence 7899999998876652 2348999988 56542 22222222 34556889999994444443 34 56
Q ss_pred EEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce-EeeccCCcceEEe
Q 004816 325 HKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-SLLDIPFTDIDNI 403 (729)
Q Consensus 325 ~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~-~~lt~~~~~v~~~ 403 (729)
.++|..+++.......... ..+.. ...+.. .++.++++...+|...|| ++.+++. +.+......+..+
T Consensus 217 ~iwd~~~~~~~~~~~~~~~---~~~~~---~~~~~~---~~~~~l~sg~~dg~i~vw--d~~~~~~~~~~~~h~~~v~~~ 285 (312)
T 4ery_A 217 KLWDYSKGKCLKTYTGHKN---EKYCI---FANFSV---TGGKWIVSGSEDNLVYIW--NLQTKEIVQKLQGHTDVVIST 285 (312)
T ss_dssp EEEETTTTEEEEEECSSCC---SSSCC---CEEEEC---SSSCEEEECCTTSCEEEE--ETTTCCEEEEECCCSSCEEEE
T ss_pred EEEECCCCcEEEEEEecCC---ceEEE---EEEEEe---CCCcEEEEECCCCEEEEE--ECCCchhhhhhhccCCcEEEE
Confidence 6778888765443321111 11100 011111 344556666666755554 7766664 3454455556666
Q ss_pred -eeeCCEEEEEEe
Q 004816 404 -TLGNDCLFVEGA 415 (729)
Q Consensus 404 -~~~~~~~~~~~~ 415 (729)
..+++.+++.++
T Consensus 286 ~~~p~~~~l~s~~ 298 (312)
T 4ery_A 286 ACHPTENIIASAA 298 (312)
T ss_dssp EECSSSSEEEEEE
T ss_pred eecCcCCceEEEE
Confidence 344444544443
No 275
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.09 E-value=8.7e-08 Score=102.54 Aligned_cols=277 Identities=7% Similarity=-0.023 Sum_probs=160.1
Q ss_pred CceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcEEEE
Q 004816 92 GGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRLYKH 170 (729)
Q Consensus 92 ~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l~~~ 170 (729)
..+.|+ ++.++-.. .++...+|....+ +...+.... +.....+..++++ ..+++...++.|.+|
T Consensus 97 ~~~~~s-~~~l~~~~----~d~~v~lw~~~~~---~~~~~~~~~-------~~~~v~~v~~s~~~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 97 NLLDWS-NLNVVAVA----LERNVYVWNADSG---SVSALAETD-------ESTYVASVKWSHDGSFLSVGLGNGLVDIY 161 (401)
T ss_dssp BCEEEC-TTSEEEEE----ETTEEEEEETTTC---CEEEEEECC-------TTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEeec-CCCEEEEE----CCCeEEEeeCCCC---cEeEeeecC-------CCCCEEEEEECCCCCEEEEECCCCeEEEE
Confidence 457777 55555443 2566667765433 333332211 1112334444433 344555567899999
Q ss_pred eCCCCCCC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCC-Cc-eEEeeeCCCeeeeee
Q 004816 171 SIDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-QN-IQVLVSGSDFYAFPR 247 (729)
Q Consensus 171 d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~-g~-~~~lt~~~~~~~~~~ 247 (729)
++.+ ++ .+.+... ...+....| +++.++....+ ..|.++|+.. +. ...+...........
T Consensus 162 d~~~--~~~~~~~~~~----~~~v~~~~~--~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 224 (401)
T 4aez_A 162 DVES--QTKLRTMAGH----QARVGCLSW--NRHVLSSGSRS---------GAIHHHDVRIANHQIGTLQGHSSEVCGLA 224 (401)
T ss_dssp ETTT--CCEEEEECCC----SSCEEEEEE--ETTEEEEEETT---------SEEEEEETTSSSCEEEEEECCSSCEEEEE
T ss_pred ECcC--CeEEEEecCC----CCceEEEEE--CCCEEEEEcCC---------CCEEEEecccCcceeeEEcCCCCCeeEEE
Confidence 9987 44 3444433 345566677 56665555432 4688999984 33 334444556677889
Q ss_pred eCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceEEEE
Q 004816 248 MDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHK 326 (729)
Q Consensus 248 ~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~ 326 (729)
|+|||+.|+..+. ...|.++|+. +++. ...+.... ..+..+.|+|+|. ++..... .....|.+
T Consensus 225 ~~~~~~~l~s~~~--------d~~v~iwd~~-~~~~--~~~~~~~~----~~v~~~~~~p~~~~ll~~~~g-s~d~~i~i 288 (401)
T 4aez_A 225 WRSDGLQLASGGN--------DNVVQIWDAR-SSIP--KFTKTNHN----AAVKAVAWCPWQSNLLATGGG-TMDKQIHF 288 (401)
T ss_dssp ECTTSSEEEEEET--------TSCEEEEETT-CSSE--EEEECCCS----SCCCEEEECTTSTTEEEEECC-TTTCEEEE
T ss_pred EcCCCCEEEEEeC--------CCeEEEccCC-CCCc--cEEecCCc----ceEEEEEECCCCCCEEEEecC-CCCCEEEE
Confidence 9999998887662 2349999998 5654 33444444 5677899999988 7766542 12356788
Q ss_pred EEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEE-ECCeEEEEEEECCCCceEe---eccCCcceEE
Q 004816 327 WIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR-QNGRSYLGILDDFGHSLSL---LDIPFTDIDN 402 (729)
Q Consensus 327 ~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~-~~g~~~ly~~d~~~g~~~~---lt~~~~~v~~ 402 (729)
+|..+++..........+....|++ +++.++..+. .+|...||-+. +++... +......+..
T Consensus 289 ~d~~~~~~~~~~~~~~~v~~~~~s~------------~~~~l~~~~g~~dg~i~v~~~~--~~~~~~~~~~~~h~~~v~~ 354 (401)
T 4aez_A 289 WNAATGARVNTVDAGSQVTSLIWSP------------HSKEIMSTHGFPDNNLSIWSYS--SSGLTKQVDIPAHDTRVLY 354 (401)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECS------------SSSEEEEEECTTTCEEEEEEEE--TTEEEEEEEEECCSSCCCE
T ss_pred EECCCCCEEEEEeCCCcEEEEEECC------------CCCeEEEEeecCCCcEEEEecC--CccceeEEEecCCCCCEEE
Confidence 8988877655443333333344443 5665555432 56766666554 444332 3344555666
Q ss_pred e-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 403 I-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 403 ~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+ ..+++.+++.++.. ..+..+++.+++.
T Consensus 355 ~~~s~dg~~l~s~~~d---g~i~iw~~~~~~~ 383 (401)
T 4aez_A 355 SALSPDGRILSTAASD---ENLKFWRVYDGDH 383 (401)
T ss_dssp EEECTTSSEEEEECTT---SEEEEEECCC---
T ss_pred EEECCCCCEEEEEeCC---CcEEEEECCCCcc
Confidence 6 44455555555433 4677888877653
No 276
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=99.08 E-value=1.2e-09 Score=112.63 Aligned_cols=210 Identities=12% Similarity=-0.004 Sum_probs=120.9
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccch-hhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCc
Q 004816 471 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI 549 (729)
Q Consensus 471 ~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~-~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~ 549 (729)
.+...++.|.... ....+.||++||..++... .|. .+.+.|.++||.|+.+|++|.+.... .
T Consensus 15 ~l~~~i~~p~~~~-----~~~~~~VvllHG~~~~~~~-~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~---~-------- 77 (317)
T 1tca_A 15 VLDAGLTCQGASP-----SSVSKPILLVPGTGTTGPQ-SFDSNWIPLSTQLGYTPCWISPPPFMLNDT---Q-------- 77 (317)
T ss_dssp HHHHTEEETTBCT-----TSCSSEEEEECCTTCCHHH-HHTTTHHHHHHTTTCEEEEECCTTTTCSCH---H--------
T ss_pred HHhheeeCCCCCC-----CCCCCeEEEECCCCCCcch-hhHHHHHHHHHhCCCEEEEECCCCCCCCcH---H--------
Confidence 3444456565421 2234679999998544321 144 67788889999999999997532111 0
Q ss_pred ccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CC---CcceEEEEeccccChhHHhhhcch---hhhhhh
Q 004816 550 VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FR---DTFKAGASLYGVADLSMLRAETHK---FESRYI 622 (729)
Q Consensus 550 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~---~~~~a~v~~~~~~d~~~~~~~~~~---~~~~~~ 622 (729)
...+++.+.++++.+.. +.+++.|+|||+||.++..++. ++ ++++++|++++............. ......
T Consensus 78 ~~~~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~~~~~~~~~~~ 155 (317)
T 1tca_A 78 VNTEYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVW 155 (317)
T ss_dssp HHHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHHTTCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhhhhhhcCchHH
Confidence 12467788888887753 2478999999999999988876 54 789999999986542221110000 000000
Q ss_pred hhhcCCh--hhhhhcCcccccCCCCCCEEEEEeCCCCCCChHH--HHHHHHHHHhCCCCEEEEEE-------CCCCcccC
Q 004816 623 DNLVGSE--KDYYEKSPINFVDKFSCPIILFQGLEDKVVPPDQ--ARKIYKALKENGLPVALVEY-------EGEQHGFR 691 (729)
Q Consensus 623 ~~~~~~~--~~~~~~sp~~~~~~i~~PvL~i~G~~D~~vp~~~--~~~~~~~l~~~g~~~~~~~~-------~~~gH~~~ 691 (729)
....+.. ..+.... .....+|+++++|..|.+|++.. +......+. +. +.+.+ ++.+|...
T Consensus 156 ~~~~~s~f~~~L~~~~----~~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~--~a--~~~~~~~~~~~~~~~gH~~~ 227 (317)
T 1tca_A 156 QQTTGSALTTALRNAG----GLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLF--NG--KNVQAQAVCGPLFVIDHAGS 227 (317)
T ss_dssp HTBTTCHHHHHHHHTT----TTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCB--TS--EEEEHHHHHCTTCCCCTTHH
T ss_pred hhCcCcHHHHHHHhcC----CCCCCCCEEEEEeCCCCeECCccccccchhhhcc--CC--ccEEeeeccCCCCccCcccc
Confidence 0000000 1111100 01246899999999999998765 211112221 11 22222 47789632
Q ss_pred CcccHHHHHHHHHHHHHH
Q 004816 692 KAENIKFTLEQQMVFFAR 709 (729)
Q Consensus 692 ~~~~~~~~~~~~~~fl~~ 709 (729)
..+ ...++.+++||+.
T Consensus 228 -l~~-p~~~~~v~~~L~~ 243 (317)
T 1tca_A 228 -LTS-QFSYVVGRSALRS 243 (317)
T ss_dssp -HHB-HHHHHHHHHHHHC
T ss_pred -cCC-HHHHHHHHHHhcC
Confidence 122 2456778888876
No 277
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.07 E-value=3.9e-08 Score=103.16 Aligned_cols=229 Identities=12% Similarity=0.023 Sum_probs=135.6
Q ss_pred ceEEEECC-EEEEEECCCCcEEEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEE
Q 004816 148 GAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (729)
Q Consensus 148 ~~~~~~~~-~i~~~~~~~~~l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~ 225 (729)
.+..++.+ ..+++...++.|.+|++.+ ++. ..+... ...+..++|+|||+.|+....+ ..|.+
T Consensus 36 ~~~~~s~~~~~l~~~~~dg~i~vwd~~~--~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~d---------g~i~i 100 (369)
T 3zwl_B 36 TQVKYNKEGDLLFSCSKDSSASVWYSLN--GERLGTLDGH----TGTIWSIDVDCFTKYCVTGSAD---------YSIKL 100 (369)
T ss_dssp EEEEECTTSCEEEEEESSSCEEEEETTT--CCEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------TEEEE
T ss_pred EEEEEcCCCCEEEEEeCCCEEEEEeCCC--chhhhhhhhc----CCcEEEEEEcCCCCEEEEEeCC---------CeEEE
Confidence 33444433 4455555678899999987 443 444433 3457888999999988766543 46999
Q ss_pred EEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe-ee--------eEEecCCCCCc
Q 004816 226 IALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YK--------RVCVAGFDPTI 296 (729)
Q Consensus 226 ~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~-~~--------~~~~~~~~~~~ 296 (729)
+|+.+++...............|+|||+.|+....+... ....|.++|+. .+.. .. ..........
T Consensus 101 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~---~~g~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 175 (369)
T 3zwl_B 101 WDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMK---NPGSINIYEIE-RDSATHELTKVSEEPIHKIITHEGL- 175 (369)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTT---BCCEEEEEEEE-ECTTTCCEEEECSSCSEEEECCTTC-
T ss_pred EECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccC---CCCEEEEEEec-CCccceeecccccceeeeccCCcCc-
Confidence 999998876665566667789999999999877633111 23568888887 3321 11 1111122100
Q ss_pred cccccCceeCCCCcEEEEEecCCCceEEEEEEcCC-CeEEE-eeccCccccCCcccccCcceeeeeecCCCCEEEEEEEE
Q 004816 297 VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESN-NEVLA-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ 374 (729)
Q Consensus 297 ~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~-g~~~~-l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~ 374 (729)
..+..+.|+|||++++.... .+ .|.++|+.+ ++... +......+....|.+ +++.| ++...
T Consensus 176 -~~~~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~------------~~~~l-~~~~~ 238 (369)
T 3zwl_B 176 -DAATVAGWSTKGKYIIAGHK-DG--KISKYDVSNNYEYVDSIDLHEKSISDMQFSP------------DLTYF-ITSSR 238 (369)
T ss_dssp -CCEEEEEECGGGCEEEEEET-TS--EEEEEETTTTTEEEEEEECCSSCEEEEEECT------------TSSEE-EEEET
T ss_pred -cceeEEEEcCCCCEEEEEcC-CC--EEEEEECCCCcEeEEEEecCCCceeEEEECC------------CCCEE-EEecC
Confidence 15567889999994444443 33 577778877 44333 322333333333433 55444 45555
Q ss_pred CCeEEEEEEECCCCceEeeccCCcceEEe-eeeCCEEEEEEe
Q 004816 375 NGRSYLGILDDFGHSLSLLDIPFTDIDNI-TLGNDCLFVEGA 415 (729)
Q Consensus 375 ~g~~~ly~~d~~~g~~~~lt~~~~~v~~~-~~~~~~~~~~~~ 415 (729)
++. |.++|+.+++..........+..+ ..+++..++.++
T Consensus 239 d~~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 278 (369)
T 3zwl_B 239 DTN--SFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGG 278 (369)
T ss_dssp TSE--EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEE
T ss_pred Cce--EEEEECCCCceeeeecCCCCceeEEecCCCceEEEee
Confidence 664 555577777655444444555555 344444444444
No 278
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.07 E-value=4.5e-09 Score=109.70 Aligned_cols=120 Identities=8% Similarity=-0.046 Sum_probs=69.8
Q ss_pred EEEECCEEEEEECCCCcEEEEeCCCCCCCCe-ecCCCCCC--CceeeecceecCCCCEEEEEEeccCCCCCC---cceEE
Q 004816 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGE--PLVSYADGIFDPRFNRYVTVREDRRQDALN---STTEI 223 (729)
Q Consensus 150 ~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~-~lt~~~~~--~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~---~~~~l 223 (729)
++++++.+++....++.|+++|+.+ ++.. .+...... .......++|||||++|++...+....... ....|
T Consensus 50 ~s~dg~~~~v~~~~~~~i~~~d~~t--~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i 127 (349)
T 1jmx_B 50 MAPDNRTAYVLNNHYGDIYGIDLDT--CKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRL 127 (349)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTT--TEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEE
T ss_pred ECCCCCEEEEEeCCCCcEEEEeCCC--CcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeE
Confidence 4444556667766678999999987 5433 33221100 011236778999999988776431000000 02579
Q ss_pred EEEEcCCCceE---EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe
Q 004816 224 VAIALNGQNIQ---VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV 283 (729)
Q Consensus 224 ~~~dl~~g~~~---~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~ 283 (729)
+++|+++++.. ............+|||||+ |++.. .+|+++|+. +++.
T Consensus 128 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~----------~~i~~~d~~-~~~~ 178 (349)
T 1jmx_B 128 EVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAG----------PDIYKMDVK-TGKY 178 (349)
T ss_dssp EEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEES----------SSEEEECTT-TCCE
T ss_pred EEEECCCccccceeeeccCCCcccceeECCCCc-EEEcc----------CcEEEEeCC-CCce
Confidence 99999885432 2223333445567999999 65432 128888877 5654
No 279
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.07 E-value=1.7e-08 Score=105.66 Aligned_cols=242 Identities=6% Similarity=-0.078 Sum_probs=136.4
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC----CEEEEEECC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG----DTVIFSNYK 163 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~ 163 (729)
..+..+.|+| +..++........++...+|....+ +...+...+ +.....+..+++ +.++++...
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~---~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~l~~~~~ 88 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHG---DLKLLREIE-------KAKPIKCGTFGATSLQQRYLATGDF 88 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSS---SEEEEEEEE-------ESSCEEEEECTTCCTTTCCEEEEET
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCC---cccceeeec-------ccCcEEEEEEcCCCCCCceEEEecC
Confidence 4567899999 7777666543223577777766433 222111100 111223333433 256666667
Q ss_pred CCcEEEEeCCCCCC-CCeecCCCCCCCceeeecc------eecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc--eE
Q 004816 164 DQRLYKHSIDSKDS-SPLPITPDYGEPLVSYADG------IFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN--IQ 234 (729)
Q Consensus 164 ~~~l~~~d~~~~~~-~~~~lt~~~~~~~~~~~~~------~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~--~~ 234 (729)
++.|.+|++.++ . ....+... ...+... +|+|||+.|+....+ ..|.++|+.+++ ..
T Consensus 89 dg~i~iwd~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~s~~~~~l~~~~~d---------~~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 89 GGNLHIWNLEAP-EMPVYSVKGH----KEIINAIDGIGGLGIGEGAPEIVTGSRD---------GTVKVWDPRQKDDPVA 154 (357)
T ss_dssp TSCEEEECTTSC-SSCSEEECCC----SSCEEEEEEESGGGCC-CCCEEEEEETT---------SCEEEECTTSCSSCSE
T ss_pred CCeEEEEeCCCC-CccEEEEEec----ccceEEEeeccccccCCCccEEEEEeCC---------CeEEEEeCCCCCCcce
Confidence 889999999872 2 34444433 2223333 679999987766543 358889998865 34
Q ss_pred EeeeCCC----eee----eeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeC
Q 004816 235 VLVSGSD----FYA----FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 306 (729)
Q Consensus 235 ~lt~~~~----~~~----~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ws 306 (729)
.+....+ ... .++|+|||+.|+... ....|+++|+. +++. ... .... ..+..+.|+
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~--------~d~~i~i~d~~-~~~~--~~~-~~~~----~~v~~~~~~ 218 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY--------DNGDIKLFDLR-NMAL--RWE-TNIK----NGVCSLEFD 218 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE--------TTSEEEEEETT-TTEE--EEE-EECS----SCEEEEEES
T ss_pred eccccCCCCCCceEEEEEEeccCCCCCEEEEEc--------cCCeEEEEECc-cCce--eee-cCCC----CceEEEEcC
Confidence 4432121 222 334899999888766 23469999998 6654 222 2233 456788999
Q ss_pred C---CCcEEEEEecCCCceEEEEEEcCCCeEEE-e-----eccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCe
Q 004816 307 S---KGELFFVTDRKNGFWNLHKWIESNNEVLA-I-----YSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR 377 (729)
Q Consensus 307 p---DG~l~~~~~~~~g~~~l~~~d~~~g~~~~-l-----~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~ 377 (729)
| ++++++.... .+. |.++|+.+++... + ......+. .+.|.+ +++.++++...+|.
T Consensus 219 ~~~~~~~~l~~~~~-dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~~---~~~~~l~~~~~dg~ 283 (357)
T 3i2n_A 219 RKDISMNKLVATSL-EGK--FHVFDMRTQHPTKGFASVSEKAHKSTVW---------QVRHLP---QNRELFLTAGGAGG 283 (357)
T ss_dssp CSSSSCCEEEEEES-TTE--EEEEEEEEEETTTEEEEEEEECCSSCEE---------EEEEET---TEEEEEEEEETTSE
T ss_pred CCCCCCCEEEEECC-CCe--EEEEeCcCCCcccceeeeccCCCcCCEE---------EEEECC---CCCcEEEEEeCCCc
Confidence 9 8885444444 454 4455554433211 1 11222222 234442 55547788888898
Q ss_pred EEEEEEEC
Q 004816 378 SYLGILDD 385 (729)
Q Consensus 378 ~~ly~~d~ 385 (729)
..||.+..
T Consensus 284 i~iwd~~~ 291 (357)
T 3i2n_A 284 LHLWKYEY 291 (357)
T ss_dssp EEEEEEEC
T ss_pred EEEeecCC
Confidence 88887764
No 280
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.06 E-value=8.9e-09 Score=110.30 Aligned_cols=244 Identities=11% Similarity=0.053 Sum_probs=141.4
Q ss_pred CceEEEEC--CEEEEEECCCCcEEEEeCCCCCCC--------CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCC
Q 004816 147 GGAFRIFG--DTVIFSNYKDQRLYKHSIDSKDSS--------PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDA 216 (729)
Q Consensus 147 ~~~~~~~~--~~i~~~~~~~~~l~~~d~~~~~~~--------~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~ 216 (729)
+.++.++. +.++++...++.|.+|++.+ +. ...+... ...+...+|+|+|+.++++...+
T Consensus 84 V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~--~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~~l~s~~~d---- 153 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPD--GGLVLPLREPVITLEGH----TKRVGIVAWHPTAQNVLLSAGCD---- 153 (402)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEECCT--TCCSSCBCSCSEEEECC----SSCEEEEEECSSBTTEEEEEETT----
T ss_pred EEEEEeCCCCCCEEEEEeCCCeEEEEEccC--CCCccccCCceEEecCC----CCeEEEEEECcCCCCEEEEEcCC----
Confidence 34455543 45667777788999999987 42 2233333 34567889999995444554432
Q ss_pred CCcceEEEEEEcCCCceEEee---eCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEe-cCC
Q 004816 217 LNSTTEIVAIALNGQNIQVLV---SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV-AGF 292 (729)
Q Consensus 217 ~~~~~~l~~~dl~~g~~~~lt---~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~-~~~ 292 (729)
..|.++|+.+++..... .........+|+|||+.|+... ....|.++|+. +++. ...+ ...
T Consensus 154 ----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~iwd~~-~~~~--~~~~~~~~ 218 (402)
T 2aq5_A 154 ----NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC--------RDKRVRVIEPR-KGTV--VAEKDRPH 218 (402)
T ss_dssp ----SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE--------TTSEEEEEETT-TTEE--EEEEECSS
T ss_pred ----CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe--------cCCcEEEEeCC-CCce--eeeeccCC
Confidence 45899999988765433 2445667889999999998776 23469999998 6654 3333 333
Q ss_pred CCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeE-EEee--ccCccccCCcccccCcceeeeeecCCCCEEE
Q 004816 293 DPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEV-LAIY--SLDAEFSRPLWVFGINSYEIIQSHGEKNLIA 369 (729)
Q Consensus 293 ~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~-~~l~--~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~ 369 (729)
. + ..+..+.|+|||++++..........|.++|+.+++. ..+. .....+....|++ +++.++
T Consensus 219 ~-~--~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~------------~~~~l~ 283 (402)
T 2aq5_A 219 E-G--TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDP------------DTNIVY 283 (402)
T ss_dssp C-S--SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEET------------TTTEEE
T ss_pred C-C--CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcC------------CCCEEE
Confidence 2 1 2356789999998555542212346788888877543 1111 1222222333333 677776
Q ss_pred EEEEECCeEEEEEEECCCCc--eEeecc--CCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcceeee
Q 004816 370 CSYRQNGRSYLGILDDFGHS--LSLLDI--PFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 370 ~~s~~~g~~~ly~~d~~~g~--~~~lt~--~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~lt 437 (729)
++...+|...+|-+ .+++ ...+.. ....+..+ ..+++.+++ + .+ ..+..+++.+++.+.+.
T Consensus 284 ~~g~~dg~i~i~d~--~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~--s-~~--~~~~~~~l~~~~~~~i~ 349 (402)
T 2aq5_A 284 LCGKGDSSIRYFEI--TSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV--N-KC--EIARFYKLHERKCEPIA 349 (402)
T ss_dssp EEETTCSCEEEEEE--CSSTTCEEEEEEECCSSCCSEEEECCGGGSCG--G-GT--EEEEEEEEETTEEEEEE
T ss_pred EEEcCCCeEEEEEe--cCCCcceEeecccccCCcccceEEecccccce--e-cc--eeEEEEEcCCCcEEEEE
Confidence 66656776666655 4444 444433 22445555 233333322 1 11 14455555566655443
No 281
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.05 E-value=9e-09 Score=107.80 Aligned_cols=241 Identities=8% Similarity=-0.014 Sum_probs=143.9
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcEE
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRLY 168 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l~ 168 (729)
.+..+.|+|++.+. +.. .+|...||....+ +....... ...-|...+.+.+++.+ ..+++...++.|.
T Consensus 84 ~v~~~~~s~d~~l~-~~s---~dg~v~lWd~~~~---~~~~~~~~----~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~ 152 (344)
T 4gqb_B 84 GVADLTWVGERGIL-VAS---DSGAVELWELDEN---ETLIVSKF----CKYEHDDIVSTVSVLSSGTQAVSGSKDICIK 152 (344)
T ss_dssp CEEEEEEETTTEEE-EEE---TTSEEEEEEECTT---SSCEEEEE----EEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CEEEEEEeCCCeEE-EEE---CCCEEEEEeccCC---CceeEeec----cccCCCCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 35678999744433 332 4678888876543 22111100 00001222334444433 4556666788999
Q ss_pred EEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE-eee--CCCeee
Q 004816 169 KHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV-LVS--GSDFYA 244 (729)
Q Consensus 169 ~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~-lt~--~~~~~~ 244 (729)
+||+.+ ++. ..+... ...+....|+|+|+.++.+...+ ..|.++|+.+++... +.. ......
T Consensus 153 iwd~~~--~~~~~~~~~h----~~~V~~~~~~~~~~~~l~s~s~D--------~~v~iwd~~~~~~~~~~~~~~~~~~~~ 218 (344)
T 4gqb_B 153 VWDLAQ--QVVLSSYRAH----AAQVTCVAASPHKDSVFLSCSED--------NRILLWDTRCPKPASQIGCSAPGYLPT 218 (344)
T ss_dssp EEETTT--TEEEEEECCC----SSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTSSSCEEECC----CCCEE
T ss_pred EEECCC--CcEEEEEcCc----CCceEEEEecCCCCCceeeeccc--------cccccccccccceeeeeecceeeccce
Confidence 999987 543 334433 34567889999998665554433 458889999877543 322 222356
Q ss_pred eeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceE
Q 004816 245 FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWN 323 (729)
Q Consensus 245 ~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~ 323 (729)
...|+|++..++.+... +..|.++|+. +++. +..+.+.. ..+..++|+|||. +++.... .+ .
T Consensus 219 ~~~~~p~~~~~l~sg~~-------dg~v~~wd~~-~~~~--~~~~~~h~----~~v~~v~fsp~g~~~lasgs~-D~--~ 281 (344)
T 4gqb_B 219 SLAWHPQQSEVFVFGDE-------NGTVSLVDTK-STSC--VLSSAVHS----QCVTGLVFSPHSVPFLASLSE-DC--S 281 (344)
T ss_dssp EEEECSSCTTEEEEEET-------TSEEEEEESC-C--C--CEEEECCS----SCEEEEEECSSSSCCEEEEET-TS--C
T ss_pred eeeecCCCCcceEEecc-------CCcEEEEECC-CCcE--EEEEcCCC----CCEEEEEEccCCCeEEEEEeC-CC--e
Confidence 78999976655544422 3458999998 6654 44556665 5677889999996 6555544 34 4
Q ss_pred EEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEE
Q 004816 324 LHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 384 (729)
Q Consensus 324 l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d 384 (729)
|.++|..+++...+......+....|++ +++.++.+...|+...+|.++
T Consensus 282 i~vwd~~~~~~~~~~~H~~~V~~v~~sp------------~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 282 LAVLDSSLSELFRSQAHRDFVRDATWSP------------LNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EEEECTTCCEEEEECCCSSCEEEEEECS------------SSTTEEEEEETTSCEEEEECC
T ss_pred EEEEECCCCcEEEEcCCCCCEEEEEEeC------------CCCeEEEEEcCCCeEEEEECC
Confidence 6667888887665543333333334443 677777777788888777654
No 282
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.05 E-value=2.4e-08 Score=103.41 Aligned_cols=233 Identities=6% Similarity=-0.026 Sum_probs=136.6
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcEE
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRLY 168 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l~ 168 (729)
.+..+.++|.+.+..... .++...+|....+ ...+.+.... .....+.++++ ..+++...++.+.
T Consensus 82 ~v~~~~~~~~~~~l~s~s---~D~~i~lWd~~~~--~~~~~~~~~~---------~~~~~~~~spdg~~l~~g~~dg~v~ 147 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSS---LDAHIRLWDLENG--KQIKSIDAGP---------VDAWTLAFSPDSQYLATGTHVGKVN 147 (321)
T ss_dssp CEEEEEECSSSSEEEEEE---TTSEEEEEETTTT--EEEEEEECCT---------TCCCCEEECTTSSEEEEECTTSEEE
T ss_pred CEEEEEECCCCCEEEEEe---CCCcEEEEECCCC--CEEEEEeCCC---------ccEEEEEECCCCCEEEEEcCCCcEE
Confidence 345677777333333333 3566667765432 1111121111 11222333322 3445556678999
Q ss_pred EEeCCCCCCCCe-ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee-CCCeeeee
Q 004816 169 KHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS-GSDFYAFP 246 (729)
Q Consensus 169 ~~d~~~~~~~~~-~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~-~~~~~~~~ 246 (729)
++++.+ ++.. .+... ...+...+|+|||++|+....+ ..|.++|+.+++...... ........
T Consensus 148 i~~~~~--~~~~~~~~~~----~~~v~~~~~spdg~~lasg~~d---------g~i~iwd~~~~~~~~~~~~h~~~v~~l 212 (321)
T 3ow8_A 148 IFGVES--GKKEYSLDTR----GKFILSIAYSPDGKYLASGAID---------GIINIFDIATGKLLHTLEGHAMPIRSL 212 (321)
T ss_dssp EEETTT--CSEEEEEECS----SSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTTEEEEEECCCSSCCCEE
T ss_pred EEEcCC--CceeEEecCC----CceEEEEEECCCCCEEEEEcCC---------CeEEEEECCCCcEEEEEcccCCceeEE
Confidence 999987 4432 33332 2446778999999988766543 358899999887644333 34456778
Q ss_pred eeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEE
Q 004816 247 RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHK 326 (729)
Q Consensus 247 ~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~ 326 (729)
+|||||+.|+..+. ...|.++|+. +++. ...+.+.. ..+..++|+|||++++.... .+ .|.+
T Consensus 213 ~~spd~~~l~s~s~--------dg~i~iwd~~-~~~~--~~~~~~h~----~~v~~~~~sp~~~~l~s~s~-D~--~v~i 274 (321)
T 3ow8_A 213 TFSPDSQLLVTASD--------DGYIKIYDVQ-HANL--AGTLSGHA----SWVLNVAFCPDDTHFVSSSS-DK--SVKV 274 (321)
T ss_dssp EECTTSCEEEEECT--------TSCEEEEETT-TCCE--EEEECCCS----SCEEEEEECTTSSEEEEEET-TS--CEEE
T ss_pred EEcCCCCEEEEEcC--------CCeEEEEECC-Ccce--eEEEcCCC----CceEEEEECCCCCEEEEEeC-CC--cEEE
Confidence 99999998876552 2348999988 6654 44555554 56678899999995445444 34 4666
Q ss_pred EEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEE
Q 004816 327 WIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 382 (729)
Q Consensus 327 ~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~ 382 (729)
+|+.+++..... .....+.. +.|.+ +++ .+++...+|..+||-
T Consensus 275 wd~~~~~~~~~~~~h~~~v~~---------v~~s~---~g~-~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 275 WDVGTRTCVHTFFDHQDQVWG---------VKYNG---NGS-KIVSVGDDQEIHIYD 318 (321)
T ss_dssp EETTTTEEEEEECCCSSCEEE---------EEECT---TSS-EEEEEETTCCEEEEE
T ss_pred EeCCCCEEEEEEcCCCCcEEE---------EEECC---CCC-EEEEEeCCCeEEEEe
Confidence 688777654333 22222222 33432 444 455666778777764
No 283
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.04 E-value=1.1e-07 Score=99.54 Aligned_cols=195 Identities=10% Similarity=-0.035 Sum_probs=118.8
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCC--cccCCCCCcccccccccCCceEEEECC-EEEEEECCCC
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEP--SDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~ 165 (729)
.+..+.|+| |+.++--. .++...||....+ .. ...+..+ +.....+..++++ ..+++...++
T Consensus 18 ~v~~l~~sp~g~~las~~----~D~~i~iw~~~~~---~~~~~~~~~~~-------h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCG----GDRRIRIWGTEGD---SWICKSVLSEG-------HQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEECTTSSCEEEEE----TTSCEEEEEEETT---EEEEEEEECSS-------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEEEECCCCCEEEEEc----CCCeEEEEEcCCC---cceeeeeeccc-------cCCcEEEEEECCCCCEEEEEECCC
Confidence 345788999 66665433 4577788876432 11 1111111 1222334444433 4455666778
Q ss_pred cEEEEeCCCCCCCC---eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE----Eeee
Q 004816 166 RLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ----VLVS 238 (729)
Q Consensus 166 ~l~~~d~~~~~~~~---~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~----~lt~ 238 (729)
.+.+|++.. +.. ..+... ...+...+|+|||+.|+....+ ..|.++|+.++... .+..
T Consensus 84 ~v~iw~~~~--~~~~~~~~~~~h----~~~v~~v~~sp~~~~l~s~s~D---------~~v~iwd~~~~~~~~~~~~~~~ 148 (345)
T 3fm0_A 84 TTCIWKKNQ--DDFECVTTLEGH----ENEVKSVAWAPSGNLLATCSRD---------KSVWVWEVDEEDEYECVSVLNS 148 (345)
T ss_dssp CEEEEEECC--C-EEEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SCEEEEEECTTSCEEEEEEECC
T ss_pred cEEEEEccC--CCeEEEEEccCC----CCCceEEEEeCCCCEEEEEECC---------CeEEEEECCCCCCeEEEEEecC
Confidence 888888876 432 233333 3457888999999987766554 35888888765432 2223
Q ss_pred CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecC
Q 004816 239 GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRK 318 (729)
Q Consensus 239 ~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~ 318 (729)
........+|+|||+.|+..+.+ ..|.++|+. +++......+.+.. ..+..++|+|||++++....
T Consensus 149 h~~~v~~~~~~p~~~~l~s~s~d--------~~i~~w~~~-~~~~~~~~~~~~h~----~~v~~l~~sp~g~~l~s~s~- 214 (345)
T 3fm0_A 149 HTQDVKHVVWHPSQELLASASYD--------DTVKLYREE-EDDWVCCATLEGHE----STVWSLAFDPSGQRLASCSD- 214 (345)
T ss_dssp CCSCEEEEEECSSSSCEEEEETT--------SCEEEEEEE-TTEEEEEEEECCCS----SCEEEEEECTTSSEEEEEET-
T ss_pred cCCCeEEEEECCCCCEEEEEeCC--------CcEEEEEec-CCCEEEEEEecCCC----CceEEEEECCCCCEEEEEeC-
Confidence 34556778999999998876632 337888887 55433334455555 56778899999995445544
Q ss_pred CCceEEEEE
Q 004816 319 NGFWNLHKW 327 (729)
Q Consensus 319 ~g~~~l~~~ 327 (729)
.+.-+||..
T Consensus 215 D~~v~iW~~ 223 (345)
T 3fm0_A 215 DRTVRIWRQ 223 (345)
T ss_dssp TSCEEEEEE
T ss_pred CCeEEEecc
Confidence 566677754
No 284
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=99.03 E-value=2e-10 Score=123.74 Aligned_cols=161 Identities=12% Similarity=-0.010 Sum_probs=105.7
Q ss_pred CCCEEEEEcCCCCCCccccchh-hhHHHhh-CCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCC
Q 004816 491 KPPLLVKSHGGPTSEARGILNL-SIQYWTS-RGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKA 568 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~~-~~~~la~-~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 568 (729)
..|+||++||...+. ...|.. .++.|++ .||.|+++|+||.+.... ..... .. ....+|+.+++++|.++..+
T Consensus 69 ~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~--~~~~~-~~-~~~~~dl~~~i~~l~~~~g~ 143 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQY--SQASQ-NI-RVVGAEVAYLVQVLSTSLNY 143 (432)
T ss_dssp TSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCH--HHHHH-HH-HHHHHHHHHHHHHHHHHHCC
T ss_pred CCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECccccCccc--hhhHh-hH-HHHHHHHHHHHHHHHHhcCC
Confidence 458999999985443 223444 5667776 799999999997554331 11111 00 12257888999999765445
Q ss_pred CCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccccChhHHhhhcchhhhhhhhhhcCChhhhhhcCcccccCCCCCC
Q 004816 569 DEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVADLSMLRAETHKFESRYIDNLVGSEKDYYEKSPINFVDKFSCP 647 (729)
Q Consensus 569 d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P 647 (729)
+.+++.++|||+||.+|+.++. +|+++++++++.|..-+..... . ....++ ....+
T Consensus 144 ~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~~~~----------------~--~~~l~~-----~da~~ 200 (432)
T 1gpl_A 144 APENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQDTP----------------E--EVRLDP-----SDAKF 200 (432)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTTTCC----------------T--TTSCCG-----GGSSE
T ss_pred CcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccccccCCC----------------h--hhccCc-----CCCce
Confidence 6789999999999999999888 8999999999887643211000 0 000011 22358
Q ss_pred EEEEEeCCCCCCCh---HHHHHHHHHHHhCCCCEEEEEECCCCcc
Q 004816 648 IILFQGLEDKVVPP---DQARKIYKALKENGLPVALVEYEGEQHG 689 (729)
Q Consensus 648 vL~i~G~~D~~vp~---~~~~~~~~~l~~~g~~~~~~~~~~~gH~ 689 (729)
+.+||+..|.+||. .... ..| .+..||++||.
T Consensus 201 V~vIHt~~d~lVP~~~~g~~~-------~lg---~~dfypngg~~ 235 (432)
T 1gpl_A 201 VDVIHTDISPILPSLGFGMSQ-------KVG---HMDFFPNGGKD 235 (432)
T ss_dssp EEEECSCCSCHHHHCCCBCSS-------CCS---SEEEEEGGGSS
T ss_pred EEEEEcCCccccccccccccc-------ccc---ceEEccCCCCC
Confidence 99999999998776 2111 112 45667888885
No 285
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.02 E-value=1.4e-08 Score=109.99 Aligned_cols=290 Identities=10% Similarity=0.059 Sum_probs=157.6
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEE--CCEEEEEECCCCc
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF--GDTVIFSNYKDQR 166 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~ 166 (729)
++.++.|+| +..+..+.. .+|...||..... .....+...+ |...+.+..++ ++.++++...++.
T Consensus 121 ~V~~l~~~P~~~~~lasGs---~dg~i~lWd~~~~--~~~~~~~~~g-------H~~~V~~l~f~p~~~~~l~s~s~D~~ 188 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGS---KGGDIMLWNFGIK--DKPTFIKGIG-------AGGSITGLKFNPLNTNQFYASSMEGT 188 (435)
T ss_dssp CEEEEEECSSCTTCEEEEE---TTSCEEEECSSCC--SCCEEECCCS-------SSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred CEEEEEEeCCCCCEEEEEe---CCCEEEEEECCCC--CceeEEEccC-------CCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 466889999 766655544 4677778866443 1222221111 22234445554 4467778778889
Q ss_pred EEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeeee
Q 004816 167 LYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAFP 246 (729)
Q Consensus 167 l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~ 246 (729)
|.+||+.+ +..+.+..... ....+....|+|||+.|+....+ ..|+++|+.+.....+..........
T Consensus 189 v~iwd~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~~d---------g~i~~wd~~~~~~~~~~~h~~~v~~v 256 (435)
T 4e54_B 189 TRLQDFKG--NILRVFASSDT-INIWFCSLDVSASSRMVVTGDNV---------GNVILLNMDGKELWNLRMHKKKVTHV 256 (435)
T ss_dssp EEEEETTS--CEEEEEECCSS-CSCCCCCEEEETTTTEEEEECSS---------SBEEEEESSSCBCCCSBCCSSCEEEE
T ss_pred EEEeeccC--CceeEEeccCC-CCccEEEEEECCCCCEEEEEeCC---------CcEeeeccCcceeEEEecccceEEee
Confidence 99999986 55444443311 12334567899999987655432 46889999876665555555667788
Q ss_pred eeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCee-eeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEE
Q 004816 247 RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVY-KRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLH 325 (729)
Q Consensus 247 ~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~-~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~ 325 (729)
+|+|+++.++.+...+ ..|.++|+. .++.. ......+.. ..+..++|+|||+++++... .+. |.
T Consensus 257 ~~~p~~~~~~~s~s~d-------~~v~iwd~~-~~~~~~~~~~~~~h~----~~v~~~~~spdg~~l~s~~~-D~~--i~ 321 (435)
T 4e54_B 257 ALNPCCDWFLATASVD-------QTVKIWDLR-QVRGKASFLYSLPHR----HPVNAACFSPDGARLLTTDQ-KSE--IR 321 (435)
T ss_dssp EECTTCSSEEEEEETT-------SBCCEEETT-TCCSSSCCSBCCBCS----SCEEECCBCTTSSEEEEEES-SSC--EE
T ss_pred eecCCCceEEEEecCc-------ceeeEEecc-cccccceEEEeeecc----ccccceeECCCCCeeEEEcC-CCE--EE
Confidence 9999999776665322 337788887 44321 111122233 45667899999994444443 343 55
Q ss_pred EEEcCCCeE-EEeeccCccc------cCCcccccCcceeeeeecCCCCEEEEEEEECC---------eEEEEEEECCCCc
Q 004816 326 KWIESNNEV-LAIYSLDAEF------SRPLWVFGINSYEIIQSHGEKNLIACSYRQNG---------RSYLGILDDFGHS 389 (729)
Q Consensus 326 ~~d~~~g~~-~~l~~~~~~~------~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g---------~~~ly~~d~~~g~ 389 (729)
++|..+++. ..+....... ....|.+ ++..++.....++ ...|.+++..+++
T Consensus 322 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~ 389 (435)
T 4e54_B 322 VYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHP------------RYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK 389 (435)
T ss_dssp EEESSSSSSEEEECCCCCCCCSSSCCCBCEECS------------SSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC
T ss_pred EEECCCCccceEEecccccccccceeEEEEEcC------------CCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc
Confidence 567766543 3332211110 1122332 3333333332221 1236666777776
Q ss_pred eE-eeccC-CcceEEe--eeeCCEEEEEEeCCCCCceEEEEEcCCCcce
Q 004816 390 LS-LLDIP-FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLK 434 (729)
Q Consensus 390 ~~-~lt~~-~~~v~~~--~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~ 434 (729)
.. .+..+ ...|..+ ..+++.+++.++ . ..|.+.++..++.+
T Consensus 390 ~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d---~~i~iW~~~~gk~r 434 (435)
T 4e54_B 390 MMCQLYDPESSGISSLNEFNPMGDTLASAM-G---YHILIWSQQEARTR 434 (435)
T ss_dssp EEEEECCSSCCCCCCEEEECTTSSCEEEEC-S---SEEEECCCC-----
T ss_pred EEEEEeCCCCCcEEEEEEECCCCCEEEEEc-C---CcEEEEECCcCeee
Confidence 54 33333 2334443 334444554432 2 35777888877643
No 286
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.02 E-value=1.5e-10 Score=128.40 Aligned_cols=128 Identities=20% Similarity=0.194 Sum_probs=88.7
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcccc-chhhhHHHhh-CCcEEEEecCC-CCCCCchhHHHhhc
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTS-RGWAFVDVNYG-GSTGYGREFRERLL 544 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~-~~~~~~~la~-~G~~v~~~d~r-Gs~g~g~~~~~~~~ 544 (729)
|...+ .+|.|.... ++++.|+||++|||++...... +.. ..|++ .|+.|+.+||| |..|+.........
T Consensus 97 dcl~l--nv~~P~~~~----~~~~~Pv~v~iHGG~~~~g~~~~~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~ 168 (542)
T 2h7c_A 97 DCLYL--NIYTPADLT----KKNRLPVMVWIHGGGLMVGAASTYDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEHSR 168 (542)
T ss_dssp CCCEE--EEEECSCTT----SCCCEEEEEEECCSTTTSCCSTTSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTTCC
T ss_pred CCcEE--EEEECCCCC----CCCCCCEEEEECCCcccCCCccccCH--HHHHhcCCEEEEecCCCCccccCCCCCcccCc
Confidence 55444 567786522 2467899999999875433332 322 23554 79999999999 43333222111112
Q ss_pred cCCCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHhC---CCcceEEEEeccccC
Q 004816 545 GRWGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALAF---RDTFKAGASLYGVAD 606 (729)
Q Consensus 545 ~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~---~~~~~a~v~~~~~~d 606 (729)
+...+.|+.++++|+.++ ...|++||.|+|+|+||+++..++.. +.+|+++|+.+|...
T Consensus 169 ---~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 169 ---GNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp ---CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred ---cchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 223478999999999775 35799999999999999999888863 678999999998654
No 287
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.02 E-value=2.9e-10 Score=124.62 Aligned_cols=131 Identities=19% Similarity=0.213 Sum_probs=89.0
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcccc-chhhhHHHhhCC-cEEEEecCCCC-CCCchhHHH--h
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTSRG-WAFVDVNYGGS-TGYGREFRE--R 542 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~-~~~~~~~la~~G-~~v~~~d~rGs-~g~g~~~~~--~ 542 (729)
|...+ .+|.|.. ..++.|+||++|||+....... .......|+++| +.|+.+|||.+ -|++..... .
T Consensus 83 dcl~l--~v~~P~~------~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~ 154 (498)
T 2ogt_A 83 DGLYL--NIWSPAA------DGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGE 154 (498)
T ss_dssp CCCEE--EEEESCS------SSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCG
T ss_pred CCcEE--EEEecCC------CCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccc
Confidence 55455 4566753 2467899999999974332221 122356778776 99999999932 122221110 0
Q ss_pred hccCCCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHh---CCCcceEEEEeccccC
Q 004816 543 LLGRWGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALA---FRDTFKAGASLYGVAD 606 (729)
Q Consensus 543 ~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~---~~~~~~a~v~~~~~~d 606 (729)
.....+...+.|+..+++|+.++ ...|+++|.|+|+|+||++++.++. ...+|+++|+.+|...
T Consensus 155 ~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 155 AYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp GGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 01112234489999999999876 3468999999999999999988876 2468999999999765
No 288
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.02 E-value=3.5e-08 Score=106.01 Aligned_cols=242 Identities=11% Similarity=0.090 Sum_probs=146.8
Q ss_pred ceEEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEE
Q 004816 148 GAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (729)
Q Consensus 148 ~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~d 227 (729)
..|++++..++... .++.+++|++.+ ++....... ........|+|||+.|+....+ ..|.+++
T Consensus 62 ~~~s~~g~~l~~~~-~d~~v~i~d~~~--~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~d---------g~i~iwd 125 (420)
T 3vl1_A 62 NTFEKVGSHLYKAR-LDGHDFLFNTII--RDGSKMLKR----ADYTAVDTAKLQMRRFILGTTE---------GDIKVLD 125 (420)
T ss_dssp CEEEEEETTEEEEE-ETTEEEEEECCS--EETTTTSCS----CCEEEEEEECSSSCEEEEEETT---------SCEEEEC
T ss_pred eeeeecCCeEEEEE-cCCcEEEEEecc--cceeeEEec----CCceEEEEEecCCCEEEEEECC---------CCEEEEe
Confidence 46778777665543 467899999986 443333332 1222334689999987776543 3588899
Q ss_pred cCCCceEEee-eCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeC
Q 004816 228 LNGQNIQVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 306 (729)
Q Consensus 228 l~~g~~~~lt-~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ws 306 (729)
+.+++..... .........+|+|||+.|+..+ ....|.++|+. +++. ...+.+.. ..+..+.|+
T Consensus 126 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--------~d~~i~iwd~~-~~~~--~~~~~~h~----~~v~~~~~~ 190 (420)
T 3vl1_A 126 SNFNLQREIDQAHVSEITKLKFFPSGEALISSS--------QDMQLKIWSVK-DGSN--PRTLIGHR----ATVTDIAII 190 (420)
T ss_dssp TTSCEEEEETTSSSSCEEEEEECTTSSEEEEEE--------TTSEEEEEETT-TCCC--CEEEECCS----SCEEEEEEE
T ss_pred CCCcceeeecccccCccEEEEECCCCCEEEEEe--------CCCeEEEEeCC-CCcC--ceEEcCCC----CcEEEEEEc
Confidence 9988776653 4455677889999999888666 23459999998 6654 34455554 567788999
Q ss_pred CCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCc----cccCCccc------------ccCcceeeeeecCCCCEEEE
Q 004816 307 SKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDA----EFSRPLWV------------FGINSYEIIQSHGEKNLIAC 370 (729)
Q Consensus 307 pDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~----~~~~~~w~------------~~~~~~~~l~~~~~~~~l~~ 370 (729)
|||++++.... .+ .|.++|+.+++......... .+....|. .....+.|. .++.+++
T Consensus 191 ~~~~~l~s~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~ 263 (420)
T 3vl1_A 191 DRGRNVLSASL-DG--TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG----TYGKYVI 263 (420)
T ss_dssp TTTTEEEEEET-TS--CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS----CTTEEEE
T ss_pred CCCCEEEEEcC-CC--cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc----CCCCEEE
Confidence 99994444444 34 46666888776554442110 11011111 111223343 3345566
Q ss_pred EEEECCeEEEEEEECCCCce-Eeecc-CCcceEEe-eeeCCE-EEEEEeCCCCCceEEEEEcCCCc
Q 004816 371 SYRQNGRSYLGILDDFGHSL-SLLDI-PFTDIDNI-TLGNDC-LFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 371 ~s~~~g~~~ly~~d~~~g~~-~~lt~-~~~~v~~~-~~~~~~-~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
+...+|..+|| |+.+++. ..+.. ....+..+ ..+++. +++.++.. ..++++|+.+++
T Consensus 264 ~~~~dg~i~i~--d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d---g~i~vwd~~~~~ 324 (420)
T 3vl1_A 264 AGHVSGVITVH--NVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN---GMLAQWDLRSPE 324 (420)
T ss_dssp EEETTSCEEEE--ETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCTT
T ss_pred EEcCCCeEEEE--ECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC---CeEEEEEcCCCc
Confidence 66677765555 6666553 33333 24456666 333443 66665543 478888988764
No 289
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.02 E-value=5.5e-08 Score=108.33 Aligned_cols=242 Identities=9% Similarity=-0.021 Sum_probs=137.2
Q ss_pred EEEECCEEEEEECCCCcEEEEeC--CCCCCC-CeecCCCCCCCceeeecceecC----CCCEEEEEEeccCCCCCCcceE
Q 004816 150 FRIFGDTVIFSNYKDQRLYKHSI--DSKDSS-PLPITPDYGEPLVSYADGIFDP----RFNRYVTVREDRRQDALNSTTE 222 (729)
Q Consensus 150 ~~~~~~~i~~~~~~~~~l~~~d~--~~~~~~-~~~lt~~~~~~~~~~~~~~~SP----dG~~l~~~~~~~~~~~~~~~~~ 222 (729)
|+++++.+ |+...++.|.++|+ .+ ++ ...+..+ .....++||| ||++|+...... ..
T Consensus 186 ~spdg~~l-~v~~~d~~V~v~D~~~~t--~~~~~~i~~g-----~~p~~va~sp~~~~dg~~l~v~~~~~--------~~ 249 (543)
T 1nir_A 186 MSASGRYL-LVIGRDARIDMIDLWAKE--PTKVAEIKIG-----IEARSVESSKFKGYEDRYTIAGAYWP--------PQ 249 (543)
T ss_dssp ECTTSCEE-EEEETTSEEEEEETTSSS--CEEEEEEECC-----SEEEEEEECCSTTCTTTEEEEEEEES--------SE
T ss_pred ECCCCCEE-EEECCCCeEEEEECcCCC--CcEEEEEecC-----CCcceEEeCCCcCCCCCEEEEEEccC--------Ce
Confidence 34444444 44445689999999 55 43 2333322 3446788999 999876554332 46
Q ss_pred EEEEEcCCCceEEeeeCC------------CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEec
Q 004816 223 IVAIALNGQNIQVLVSGS------------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA 290 (729)
Q Consensus 223 l~~~dl~~g~~~~lt~~~------------~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~ 290 (729)
|.++|.+++++....... .......+||||+.+++.. .. ...|+++|+. +++...+..+.
T Consensus 250 v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~-~~------~g~i~vvd~~-~~~~l~~~~i~ 321 (543)
T 1nir_A 250 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV-KE------TGKVLLVNYK-DIDNLTVTSIG 321 (543)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE-TT------TTEEEEEECT-TSSSCEEEEEE
T ss_pred EEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE-CC------CCeEEEEEec-CCCcceeEEec
Confidence 889999988875543321 1345678999999876554 32 3469999998 54432222232
Q ss_pred CCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceee-eeecCCCCEEE
Q 004816 291 GFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEI-IQSHGEKNLIA 369 (729)
Q Consensus 291 ~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~-l~~~~~~~~l~ 369 (729)
. . ..+..+.|+|||+.++++.. +...|.++|.++++.....+.. ....+.+. ..| .+ +++.++
T Consensus 322 ~-~----~~~~~~~~spdg~~l~va~~--~~~~v~v~D~~tg~l~~~i~~g-~~ph~g~g-----~~~~~p---~~g~~~ 385 (543)
T 1nir_A 322 A-A----PFLHDGGWDSSHRYFMTAAN--NSNKVAVIDSKDRRLSALVDVG-KTPHPGRG-----ANFVHP---KYGPVW 385 (543)
T ss_dssp C-C----SSCCCEEECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECS-SSBCCTTC-----EEEEET---TTEEEE
T ss_pred c-C----cCccCceECCCCCEEEEEec--CCCeEEEEECCCCeEEEeeccC-CCCCCCCC-----cccCCC---CCccEE
Confidence 2 2 44567899999995555543 2346778999999876554311 00011010 111 11 446666
Q ss_pred EEEE-ECCeEEEEEEECCC-------Cc-eEeeccCCcceEEe-eeeCCEEEEEEeCCC----CCceEEEEEcCCCcc
Q 004816 370 CSYR-QNGRSYLGILDDFG-------HS-LSLLDIPFTDIDNI-TLGNDCLFVEGASGV----EPSSVAKVTLDDHKL 433 (729)
Q Consensus 370 ~~s~-~~g~~~ly~~d~~~-------g~-~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~----~~~~ly~~d~~~~~~ 433 (729)
++.. .++. |-+++.++ .+ ++.|..+......+ ..++++.++..+..+ ....+.++|.++++.
T Consensus 386 ~s~~~~d~~--V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 386 STSHLGDGS--ISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp EEEBSSSSE--EEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred EeccCCCce--EEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 5543 2344 55556655 23 34554433333333 344455555544211 123689999988764
No 290
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.01 E-value=5e-08 Score=108.71 Aligned_cols=295 Identities=9% Similarity=-0.013 Sum_probs=156.2
Q ss_pred cCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEE----ECCEEEEEECCCC
Q 004816 91 LGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRI----FGDTVIFSNYKDQ 165 (729)
Q Consensus 91 ~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~ 165 (729)
+..+.++| |+.+|.... ++...+|..+.. +++...-++.+..+ ...+|++ +++.++..+..++
T Consensus 181 ~~~v~~spdg~~l~v~~~----d~~V~v~D~~~~-t~~~~~~i~~g~~p-------~~va~sp~~~~dg~~l~v~~~~~~ 248 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGR----DARIDMIDLWAK-EPTKVAEIKIGIEA-------RSVESSKFKGYEDRYTIAGAYWPP 248 (543)
T ss_dssp EEEEEECTTSCEEEEEET----TSEEEEEETTSS-SCEEEEEEECCSEE-------EEEEECCSTTCTTTEEEEEEEESS
T ss_pred cceEEECCCCCEEEEECC----CCeEEEEECcCC-CCcEEEEEecCCCc-------ceEEeCCCcCCCCCEEEEEEccCC
Confidence 55778999 666665542 256555554213 11211111111011 1223444 4556665555678
Q ss_pred cEEEEeCCCCCCCCee-cCCCC---C----CCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEe-
Q 004816 166 RLYKHSIDSKDSSPLP-ITPDY---G----EPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVL- 236 (729)
Q Consensus 166 ~l~~~d~~~~~~~~~~-lt~~~---~----~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~l- 236 (729)
.|.++|..+ ++..+ +.... . .+..+.....+||||+++++..... ..|+++|..+++...+
T Consensus 249 ~v~v~D~~t--~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~--------g~i~vvd~~~~~~l~~~ 318 (543)
T 1nir_A 249 QFAIMDGET--LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET--------GKVLLVNYKDIDNLTVT 318 (543)
T ss_dssp EEEEEETTT--CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT--------TEEEEEECTTSSSCEEE
T ss_pred eEEEEeccc--cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC--------CeEEEEEecCCCcceeE
Confidence 899999887 55433 22210 0 0012456788999999866554322 5799999987543221
Q ss_pred -eeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEec-CCCCCccccccCcee-CCCCc-EE
Q 004816 237 -VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA-GFDPTIVESPTEPKW-SSKGE-LF 312 (729)
Q Consensus 237 -t~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~-~~~~~~~~~~~~~~w-spDG~-l~ 312 (729)
.....+..+..|||||++++..... ...|.++|+. ++++.. .+. +..+ .......| +||+. ++
T Consensus 319 ~i~~~~~~~~~~~spdg~~l~va~~~-------~~~v~v~D~~-tg~l~~--~i~~g~~p---h~g~g~~~~~p~~g~~~ 385 (543)
T 1nir_A 319 SIGAAPFLHDGGWDSSHRYFMTAANN-------SNKVAVIDSK-DRRLSA--LVDVGKTP---HPGRGANFVHPKYGPVW 385 (543)
T ss_dssp EEECCSSCCCEEECTTSCEEEEEEGG-------GTEEEEEETT-TTEEEE--EEECSSSB---CCTTCEEEEETTTEEEE
T ss_pred EeccCcCccCceECCCCCEEEEEecC-------CCeEEEEECC-CCeEEE--eeccCCCC---CCCCCcccCCCCCccEE
Confidence 1233445567899999988655522 2458999998 777532 222 2110 00112333 68855 65
Q ss_pred EEEecCCCceEEEEEEcCC-------CeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEE--EC--CeEEEE
Q 004816 313 FVTDRKNGFWNLHKWIESN-------NEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR--QN--GRSYLG 381 (729)
Q Consensus 313 ~~~~~~~g~~~l~~~d~~~-------g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~--~~--g~~~ly 381 (729)
++... +...|.++|.++ .+...-..... ...+ .+.+.| +++.||..+. .+ ....|.
T Consensus 386 ~s~~~--~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g---~~~~-----~v~~~p---dg~~l~v~~~~~~~~~~~~~v~ 452 (543)
T 1nir_A 386 STSHL--GDGSISLIGTDPKNHPQYAWKKVAELQGQG---GGSL-----FIKTHP---KSSHLYVDTTFNPDARISQSVA 452 (543)
T ss_dssp EEEBS--SSSEEEEEECCTTTCTTTBTSEEEEEECSC---SCCC-----CEECCT---TCCEEEECCTTCSSHHHHTCEE
T ss_pred EeccC--CCceEEEEEeCCCCCchhcCeEEEEEEcCC---CCce-----EEEcCC---CCCcEEEecCCCCCcccCceEE
Confidence 54432 334577777766 33322222111 1111 123333 6776665441 11 133678
Q ss_pred EEECCCCceE--ee--------ccCCcceEEe--eeeCCEEEEEEeC-CCCCceEEEEEcCCCcc
Q 004816 382 ILDDFGHSLS--LL--------DIPFTDIDNI--TLGNDCLFVEGAS-GVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 382 ~~d~~~g~~~--~l--------t~~~~~v~~~--~~~~~~~~~~~~~-~~~~~~ly~~d~~~~~~ 433 (729)
++|.++++.. .| +.+...+..+ ..+++.+++...+ .+....|.++|.++++.
T Consensus 453 v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~ 517 (543)
T 1nir_A 453 VFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKL 517 (543)
T ss_dssp EEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred EEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceE
Confidence 8888877643 32 2222334444 5556666655433 34467899999998875
No 291
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.01 E-value=2e-07 Score=98.75 Aligned_cols=205 Identities=9% Similarity=0.010 Sum_probs=127.4
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC--CEEEEEECCCC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG--DTVIFSNYKDQ 165 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~ 165 (729)
..+..+.|+| +..++.+.. .++...+|..... +........ -+...+.+..+++ +.++++...++
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~---~~~~~~~~~------~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGS---KGGDIILWDYDVQ---NKTSFIQGM------GPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEE---BTSCEEEEETTST---TCEEEECCC------STTCBEEEEEEETTEEEEEEEEETTT
T ss_pred CCEEEEEECCCCCCEEEEEc---CCCeEEEEeCCCc---ccceeeecC------CcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 4567889999 645555554 3577778876533 222222110 0122234455555 26677777788
Q ss_pred cEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeee
Q 004816 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAF 245 (729)
Q Consensus 166 ~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~ 245 (729)
.|.+||+.+ ...+.+..... ....+...+|+|||+.|+....+ ..|+++|+.+.....+.........
T Consensus 142 ~i~iwd~~~--~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~h~~~v~~ 209 (383)
T 3ei3_B 142 ATTLRDFSG--SVIQVFAKTDS-WDYWYCCVDVSVSRQMLATGDST---------GRLLLLGLDGHEIFKEKLHKAKVTH 209 (383)
T ss_dssp EEEEEETTS--CEEEEEECCCC-SSCCEEEEEEETTTTEEEEEETT---------SEEEEEETTSCEEEEEECSSSCEEE
T ss_pred EEEEEECCC--CceEEEeccCC-CCCCeEEEEECCCCCEEEEECCC---------CCEEEEECCCCEEEEeccCCCcEEE
Confidence 999999986 65555544311 12446788999999987766543 4799999976555666655667788
Q ss_pred eeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe--eeeEEecCCCCCccccccCceeCC-CCcEEEEEecCCCce
Q 004816 246 PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV--YKRVCVAGFDPTIVESPTEPKWSS-KGELFFVTDRKNGFW 322 (729)
Q Consensus 246 ~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~--~~~~~~~~~~~~~~~~~~~~~wsp-DG~l~~~~~~~~g~~ 322 (729)
.+|+|||+.++++... ...|.++|+. +++. ...... +.. ..+..+.|+| ||++++.... .+
T Consensus 210 ~~~~~~~~~~l~s~~~-------d~~i~iwd~~-~~~~~~~~~~~~-~~~----~~v~~~~~s~~~~~~l~~~~~-d~-- 273 (383)
T 3ei3_B 210 AEFNPRCDWLMATSSV-------DATVKLWDLR-NIKDKNSYIAEM-PHE----KPVNAAYFNPTDSTKLLTTDQ-RN-- 273 (383)
T ss_dssp EEECSSCTTEEEEEET-------TSEEEEEEGG-GCCSTTCEEEEE-ECS----SCEEEEEECTTTSCEEEEEES-SS--
T ss_pred EEECCCCCCEEEEEeC-------CCEEEEEeCC-CCCcccceEEEe-cCC----CceEEEEEcCCCCCEEEEEcC-CC--
Confidence 9999999944344422 3459999998 4221 112233 333 5667889999 9994444443 33
Q ss_pred EEEEEEcCCCe
Q 004816 323 NLHKWIESNNE 333 (729)
Q Consensus 323 ~l~~~d~~~g~ 333 (729)
.|.++|+.+++
T Consensus 274 ~i~iwd~~~~~ 284 (383)
T 3ei3_B 274 EIRVYSSYDWS 284 (383)
T ss_dssp EEEEEETTBTT
T ss_pred cEEEEECCCCc
Confidence 56667777654
No 292
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.01 E-value=1.2e-07 Score=107.67 Aligned_cols=202 Identities=8% Similarity=-0.015 Sum_probs=119.9
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcE
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRL 167 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l 167 (729)
.+..+.++| |+.+++-. ++...||..... ...+.+.. |.....+.+++++ .++.+...++.|
T Consensus 20 ~~~~~~~spdg~~l~~~~-----~~~v~l~~~~~~--~~~~~~~~---------h~~~v~~~~~spdg~~lasg~~d~~v 83 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN-----GTSVYTVPVGSL--TDTEIYTE---------HSHQTTVAKTSPSGYYCASGDVHGNV 83 (611)
T ss_dssp CCCCCEECTTSSEEEEEE-----TTEEEEEETTCS--SCCEEECC---------CSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ceeEEeeCCCCCEEEeCC-----CCEEEEecCCCc--ccCeEecC---------CCCceEEEEECCCCcEEEEEeCCCCE
Confidence 345678999 88777643 245566765432 12222221 1122333444433 445566678889
Q ss_pred EEEeCCCCCCCCe---ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeee
Q 004816 168 YKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYA 244 (729)
Q Consensus 168 ~~~d~~~~~~~~~---~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~ 244 (729)
.+||+.+ ++.. .+... ...+...+|||||++|+....+... ...|+++|.. .....+........
T Consensus 84 ~lWd~~~--~~~~~~~~~~~~----~~~v~~v~fs~dg~~l~~~~~~~~~-----~~~v~~wd~~-~~~~~l~gh~~~v~ 151 (611)
T 1nr0_A 84 RIWDTTQ--TTHILKTTIPVF----SGPVKDISWDSESKRIAAVGEGRER-----FGHVFLFDTG-TSNGNLTGQARAMN 151 (611)
T ss_dssp EEEESSS--TTCCEEEEEECS----SSCEEEEEECTTSCEEEEEECCSSC-----SEEEEETTTC-CBCBCCCCCSSCEE
T ss_pred EEeECCC--CcceeeEeeccc----CCceEEEEECCCCCEEEEEECCCCc-----eeEEEEeeCC-CCcceecCCCCCce
Confidence 9999865 3322 22222 2457889999999998877654321 1467777742 22334444455677
Q ss_pred eeeeCCCCCe-EEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceE
Q 004816 245 FPRMDPRGER-MAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWN 323 (729)
Q Consensus 245 ~~~~SPDG~~-la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~ 323 (729)
..+|+|||+. |+..+ .+ ..|.++|.. +++. ...+.++. ..+..++|+|||++++.... .+ .
T Consensus 152 ~v~f~p~~~~~l~s~s-~D-------~~v~lwd~~-~~~~--~~~l~~H~----~~V~~v~fspdg~~las~s~-D~--~ 213 (611)
T 1nr0_A 152 SVDFKPSRPFRIISGS-DD-------NTVAIFEGP-PFKF--KSTFGEHT----KFVHSVRYNPDGSLFASTGG-DG--T 213 (611)
T ss_dssp EEEECSSSSCEEEEEE-TT-------SCEEEEETT-TBEE--EEEECCCS----SCEEEEEECTTSSEEEEEET-TS--C
T ss_pred EEEECCCCCeEEEEEe-CC-------CeEEEEECC-CCeE--eeeecccc----CceEEEEECCCCCEEEEEEC-CC--c
Confidence 8899999985 55444 22 337888876 4543 44556665 56778899999995555444 34 3
Q ss_pred EEEEEcCCCeEEEe
Q 004816 324 LHKWIESNNEVLAI 337 (729)
Q Consensus 324 l~~~d~~~g~~~~l 337 (729)
|.++|..+++....
T Consensus 214 i~lwd~~~g~~~~~ 227 (611)
T 1nr0_A 214 IVLYNGVDGTKTGV 227 (611)
T ss_dssp EEEEETTTCCEEEE
T ss_pred EEEEECCCCcEeee
Confidence 55567777765443
No 293
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.00 E-value=9.6e-08 Score=97.95 Aligned_cols=230 Identities=9% Similarity=0.016 Sum_probs=140.4
Q ss_pred EEEEEECCCCcEEEEeCCCCCCC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~ 234 (729)
..+++...++.|.+||+.+ +. .+.+... ...+....|+|||+.|+....+ ..|.++|+.+++..
T Consensus 26 ~~l~s~~~dg~v~lWd~~~--~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~s~d---------~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 26 PWVLTTLYSGRVELWNYET--QVEVRSIQVT----ETPVRAGKFIARKNWIIVGSDD---------FRIRVFNYNTGEKV 90 (304)
T ss_dssp SEEEEEETTSEEEEEETTT--TEEEEEEECC----SSCEEEEEEEGGGTEEEEEETT---------SEEEEEETTTCCEE
T ss_pred CEEEEEcCCCcEEEEECCC--CceeEEeecc----CCcEEEEEEeCCCCEEEEECCC---------CEEEEEECCCCcEE
Confidence 4455666788999999987 43 3344333 2345778899999987766553 46889999988764
Q ss_pred E-eeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCC-CCcEE
Q 004816 235 V-LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS-KGELF 312 (729)
Q Consensus 235 ~-lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wsp-DG~l~ 312 (729)
. +....+.....+|+|||+.|+-.+. ...|.++|+. ++.. ....+.+.. ..+..++|+| |+.++
T Consensus 91 ~~~~~h~~~v~~~~~~~~~~~l~sgs~--------D~~v~lWd~~-~~~~-~~~~~~~h~----~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 91 VDFEAHPDYIRSIAVHPTKPYVLSGSD--------DLTVKLWNWE-NNWA-LEQTFEGHE----HFVMCVAFNPKDPSTF 156 (304)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEET--------TSCEEEEEGG-GTTE-EEEEECCCC----SCEEEEEECTTCTTEE
T ss_pred EEEeCCCCcEEEEEEcCCCCEEEEECC--------CCeEEEEECC-CCcc-hhhhhcccC----CcEEEEEECCCCCCEE
Confidence 4 4444566778899999998875552 2348889988 5532 234455555 5667889999 45655
Q ss_pred EEEecCCCceEEEEEEcCCCeEE-Eeec-cCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce
Q 004816 313 FVTDRKNGFWNLHKWIESNNEVL-AIYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 390 (729)
Q Consensus 313 ~~~~~~~g~~~l~~~d~~~g~~~-~l~~-~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~ 390 (729)
+.... .+ .|.++|+.+++.. .+.. ....+....|.+ . .++.++++...++..+|| |+.+++.
T Consensus 157 ~sgs~-D~--~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-------~----~~~~~l~s~s~D~~i~iW--d~~~~~~ 220 (304)
T 2ynn_A 157 ASGCL-DR--TVKVWSLGQSTPNFTLTTGQERGVNYVDYYP-------L----PDKPYMITASDDLTIKIW--DYQTKSC 220 (304)
T ss_dssp EEEET-TS--EEEEEETTCSSCSEEEECCCTTCEEEEEECC-------S----TTCCEEEEEETTSEEEEE--ETTTTEE
T ss_pred EEEeC-CC--eEEEEECCCCCccceeccCCcCcEEEEEEEE-------c----CCCCEEEEEcCCCeEEEE--eCCCCcc
Confidence 55554 34 4555676554322 2221 111111112221 1 234566677778876666 6666653
Q ss_pred -EeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 391 -SLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 391 -~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
..+......+..+ ..+++.+++.++.. ..+.++|..+++.
T Consensus 221 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~D---g~i~iWd~~~~~~ 262 (304)
T 2ynn_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSED---GTLKIWNSSTYKV 262 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEETTTCCE
T ss_pred ceeeCCCCCCEEEEEECCCCCEEEEEcCC---CeEEEEECCCCce
Confidence 4555555666666 44455565555543 3577778777654
No 294
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.00 E-value=2.5e-08 Score=105.33 Aligned_cols=175 Identities=14% Similarity=-0.008 Sum_probs=99.2
Q ss_pred eecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcC-CCceEEeee--CCCeeeeeeeCCCCCeE-EEEEecCCCCCC-
Q 004816 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN-GQNIQVLVS--GSDFYAFPRMDPRGERM-AWIEWHHPNMPW- 267 (729)
Q Consensus 193 ~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~-~g~~~~lt~--~~~~~~~~~~SPDG~~l-a~~~~~~~~~~~- 267 (729)
....+|||||++|+.+... .|.+++++ +|+..++.. ..+.....+|||||++| +|+.....-..+
T Consensus 42 ~~~~a~spdg~~l~~~~~~----------~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~ 111 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAMK----------KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYA 111 (365)
T ss_dssp CSEEEECTTSSEEEEEEBT----------EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEE
T ss_pred CcEEEECCCCCEEEEEccc----------eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceecc
Confidence 3567899999987655432 46667765 676655432 11234457999999974 344310000000
Q ss_pred -----CCcEEEEEEecCCCCeeee-EEec-CCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcC-CCeEEEeec
Q 004816 268 -----DKAELWVGYISENGDVYKR-VCVA-GFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES-NNEVLAIYS 339 (729)
Q Consensus 268 -----~~~~l~~~d~~~~g~~~~~-~~~~-~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~-~g~~~~l~~ 339 (729)
....+.+++++.+|+.... .... ... .....+.|+|||+.+|+++. +...|++++++ +|+.+.+..
T Consensus 112 ~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~spdG~~l~~~~~--~~~~v~~~~~~~~g~~~~~~~ 185 (365)
T 1jof_A 112 NPFYKFAGYGNVFSVSETGKLEKNVQNYEYQEN----TGIHGMVFDPTETYLYSADL--TANKLWTHRKLASGEVELVGS 185 (365)
T ss_dssp EEESSSCCEEEEEEECTTCCEEEEEEEEECCTT----CCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTSCEEEEEE
T ss_pred ceeecCCceEEEEccCCCCcCcceEeeEEeCCC----CcceEEEECCCCCEEEEEcC--CCCEEEEEEECCCCCEEEeee
Confidence 1234778887634654322 2221 111 34567899999995555554 34568888887 777654431
Q ss_pred cCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce
Q 004816 340 LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 390 (729)
Q Consensus 340 ~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~ 390 (729)
..... .. .+...+.|.+ +++.+|+..+.++...+|.++.++|+.
T Consensus 186 ~~~~~--~g--~~p~~~~~sp---dg~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 186 VDAPD--PG--DHPRWVAMHP---TGNYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp EECSS--TT--CCEEEEEECT---TSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EecCC--CC--CCCCEeEECC---CCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence 11000 00 0122344544 777787776667778888888767764
No 295
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=98.99 E-value=2.3e-10 Score=126.39 Aligned_cols=127 Identities=18% Similarity=0.213 Sum_probs=85.4
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcccc-chh--hh-HHH-hhCCcEEEEecCCCCC-CCc--hhHHHh
Q 004816 471 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNL--SI-QYW-TSRGWAFVDVNYGGST-GYG--REFRER 542 (729)
Q Consensus 471 ~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~-~~~--~~-~~l-a~~G~~v~~~d~rGs~-g~g--~~~~~~ 542 (729)
.+...+|.|.+.. +.++.|+||++|||++...... +.. ++ ..+ ...|+.|+.+|||.+. |+. .+....
T Consensus 97 cl~l~v~~P~~~~----~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~ 172 (534)
T 1llf_A 97 CLTINVVRPPGTK----AGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAE 172 (534)
T ss_dssp CCEEEEEECTTCC----TTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHH
T ss_pred CeEEEEEECCCCC----CCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCccccccc
Confidence 3555677886521 2457899999999875433322 221 11 122 2358999999999643 111 111111
Q ss_pred hccCCCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHh-C--------CCcceEEEEeccc
Q 004816 543 LLGRWGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALA-F--------RDTFKAGASLYGV 604 (729)
Q Consensus 543 ~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~-~--------~~~~~a~v~~~~~ 604 (729)
. .+...+.|+.++++|+.++ ...|++||.|+|+|+||++++.++. . ..+|+++|+.+|.
T Consensus 173 ~---~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 173 G---SGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp T---CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred C---CCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 2 2334489999999999875 3469999999999999998877665 3 5689999999984
No 296
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.99 E-value=9e-08 Score=98.36 Aligned_cols=227 Identities=11% Similarity=0.108 Sum_probs=137.0
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCe-ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~-~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~ 234 (729)
..+++...++.|.+|++.+ ++.. .+... ...+...+|+|||+.|+....+ ..|.++|+.+++..
T Consensus 36 ~~l~s~~~dg~i~iw~~~~--~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~d---------~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 36 EWLASSSADKLIKIWGAYD--GKFEKTISGH----KLGISDVAWSSDSNLLVSASDD---------KTLKIWDVSSGKCL 100 (312)
T ss_dssp SEEEEEETTSCEEEEETTT--CCEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCEE
T ss_pred CEEEEeeCCCeEEEEeCCC--cccchhhccC----CCceEEEEEcCCCCEEEEECCC---------CEEEEEECCCCcEE
Confidence 3455556778899999976 5443 34333 3456788999999987766543 46889999988764
Q ss_pred E-eeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEE
Q 004816 235 V-LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFF 313 (729)
Q Consensus 235 ~-lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~ 313 (729)
. +...........|+|||+.|+..+. ...|.++|+. +++. ...+.... ..+..+.|+|||++++
T Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~--------d~~i~iwd~~-~~~~--~~~~~~~~----~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 101 KTLKGHSNYVFCCNFNPQSNLIVSGSF--------DESVRIWDVK-TGKC--LKTLPAHS----DPVSAVHFNRDGSLIV 165 (312)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEET--------TSCEEEEETT-TCCE--EEEECCCS----SCEEEEEECTTSSEEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeC--------CCcEEEEECC-CCEE--EEEecCCC----CcEEEEEEcCCCCEEE
Confidence 4 4334455677899999998876662 2349999998 6654 34444444 4567789999999555
Q ss_pred EEecCCCceEEEEEEcCCCeEEE-eecc-CccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceE
Q 004816 314 VTDRKNGFWNLHKWIESNNEVLA-IYSL-DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 391 (729)
Q Consensus 314 ~~~~~~g~~~l~~~d~~~g~~~~-l~~~-~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~ 391 (729)
.... .+ .|.++|+.+++... +... ..... .+.|.+ +++ ++++...++..+|| |+.+++..
T Consensus 166 ~~~~-d~--~i~~wd~~~~~~~~~~~~~~~~~~~---------~~~~~~---~~~-~l~~~~~d~~i~iw--d~~~~~~~ 227 (312)
T 4ery_A 166 SSSY-DG--LCRIWDTASGQCLKTLIDDDNPPVS---------FVKFSP---NGK-YILAATLDNTLKLW--DYSKGKCL 227 (312)
T ss_dssp EEET-TS--CEEEEETTTCCEEEEECCSSCCCEE---------EEEECT---TSS-EEEEEETTTEEEEE--ETTTTEEE
T ss_pred EEeC-CC--cEEEEECCCCceeeEEeccCCCceE---------EEEECC---CCC-EEEEEcCCCeEEEE--ECCCCcEE
Confidence 5544 34 46667887765433 2211 11111 233332 454 44555667755554 77666543
Q ss_pred -eeccCCcc---e-EEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 392 -LLDIPFTD---I-DNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 392 -~lt~~~~~---v-~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
.+...... + ..+..+++.+++.++.. ..++++|+.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d---g~i~vwd~~~~~~ 271 (312)
T 4ery_A 228 KTYTGHKNEKYCIFANFSVTGGKWIVSGSED---NLVYIWNLQTKEI 271 (312)
T ss_dssp EEECSSCCSSSCCCEEEECSSSCEEEECCTT---SCEEEEETTTCCE
T ss_pred EEEEecCCceEEEEEEEEeCCCcEEEEECCC---CEEEEEECCCchh
Confidence 33322221 1 12233455555544432 4677888877653
No 297
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.98 E-value=7.8e-08 Score=101.20 Aligned_cols=236 Identities=9% Similarity=-0.035 Sum_probs=134.3
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCC--CcccCCCCCcccccccccCCceEEEECC-EEEEEECCC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDE--PSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKD 164 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~ 164 (729)
..+..+.|+| ++.++.-. .++...+|..... + ....+.. +........++++ ..+++...+
T Consensus 9 ~~i~~~~~s~~~~~l~~~~----~d~~v~i~~~~~~---~~~~~~~~~~--------h~~~v~~~~~~~~~~~l~~~~~d 73 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICP----NNHEVHIYEKSGN---KWVQVHELKE--------HNGQVTGVDWAPDSNRIVTCGTD 73 (372)
T ss_dssp SCCCEEEECTTSSEEEEEC----SSSEEEEEEEETT---EEEEEEEEEC--------CSSCEEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEECCCCCEEEEEe----CCCEEEEEeCCCC---cEEeeeeecC--------CCCcccEEEEeCCCCEEEEEcCC
Confidence 3567899999 65555432 3567677765332 2 1111111 1112333444422 344555567
Q ss_pred CcEEEEeCCCCCCCCee---cCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce----EEee
Q 004816 165 QRLYKHSIDSKDSSPLP---ITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI----QVLV 237 (729)
Q Consensus 165 ~~l~~~d~~~~~~~~~~---lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~----~~lt 237 (729)
+.|.+|++.+ ++... +... ...+....|+|||+.|+....+ ..|.++++.+++. +.+.
T Consensus 74 g~i~vwd~~~--~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d---------~~v~i~d~~~~~~~~~~~~~~ 138 (372)
T 1k8k_C 74 RNAYVWTLKG--RTWKPTLVILRI----NRAARCVRWAPNEKKFAVGSGS---------RVISICYFEQENDWWVCKHIK 138 (372)
T ss_dssp SCEEEEEEET--TEEEEEEECCCC----SSCEEEEEECTTSSEEEEEETT---------SSEEEEEEETTTTEEEEEEEC
T ss_pred CeEEEEECCC--CeeeeeEEeecC----CCceeEEEECCCCCEEEEEeCC---------CEEEEEEecCCCcceeeeeee
Confidence 8899999976 54222 2222 3456788999999988776643 3467777766652 2332
Q ss_pred e-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecC-----------------CCCeeeeEEecCCCCCcccc
Q 004816 238 S-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE-----------------NGDVYKRVCVAGFDPTIVES 299 (729)
Q Consensus 238 ~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~-----------------~g~~~~~~~~~~~~~~~~~~ 299 (729)
. .........|+|||+.|+.... ...|+++|+.. .++. ...+.... ..
T Consensus 139 ~~~~~~i~~~~~~~~~~~l~~~~~--------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~ 204 (372)
T 1k8k_C 139 KPIRSTVLSLDWHPNSVLLAAGSC--------DFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL--MFESSSSC----GW 204 (372)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEET--------TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCE--EEECCCCS----SC
T ss_pred cccCCCeeEEEEcCCCCEEEEEcC--------CCCEEEEEcccccccccccccccccccchhhh--eEecCCCC----Ce
Confidence 2 2455678899999998876652 23488888530 2332 33444443 55
Q ss_pred ccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeE
Q 004816 300 PTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS 378 (729)
Q Consensus 300 ~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~ 378 (729)
+..+.|+|||++++.... .+ .|.++|..+++..... .....+. .+.|.+ ++ .+++.. .++..
T Consensus 205 v~~~~~~~~~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~v~---------~~~~~~---~~-~~l~~~-~d~~i 267 (372)
T 1k8k_C 205 VHGVCFSANGSRVAWVSH-DS--TVCLADADKKMAVATLASETLPLL---------AVTFIT---ES-SLVAAG-HDCFP 267 (372)
T ss_dssp EEEEEECSSSSEEEEEET-TT--EEEEEEGGGTTEEEEEECSSCCEE---------EEEEEE---TT-EEEEEE-TTSSC
T ss_pred EEEEEECCCCCEEEEEeC-CC--EEEEEECCCCceeEEEccCCCCeE---------EEEEec---CC-CEEEEE-eCCeE
Confidence 678899999994444443 34 4667788776644333 2222222 234442 44 444444 67777
Q ss_pred EEEEEEC
Q 004816 379 YLGILDD 385 (729)
Q Consensus 379 ~ly~~d~ 385 (729)
.+|.++.
T Consensus 268 ~i~~~~~ 274 (372)
T 1k8k_C 268 VLFTYDS 274 (372)
T ss_dssp EEEEEET
T ss_pred EEEEccC
Confidence 7777664
No 298
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.98 E-value=1.2e-08 Score=107.61 Aligned_cols=250 Identities=11% Similarity=0.004 Sum_probs=137.9
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcEE
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRLY 168 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l~ 168 (729)
.+..+.|+|.+.++ +.. .+|...||....+ +....... ...-+...+.+..++++ ..+++...++.|.
T Consensus 96 ~V~~~~~s~d~~~l-~~s---~dg~v~lWd~~~~---~~~~~~~~----~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~ 164 (357)
T 4g56_B 96 GVTDVAWVSEKGIL-VAS---DSGAVELWEILEK---ESLLVNKF----AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVK 164 (357)
T ss_dssp CEEEEEEETTTEEE-EEE---TTSCEEEC-----------CCCCE----EECCCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred CEEEEEEcCCCCEE-EEE---CCCEEEEeecccc---ceeEEEee----ccCCCCCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 35678999833333 222 3466667654332 11111100 00001122334444433 4455666788899
Q ss_pred EEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee---CCCeee
Q 004816 169 KHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS---GSDFYA 244 (729)
Q Consensus 169 ~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~---~~~~~~ 244 (729)
+||+.+ ++. ..+... ...+...+|+|+++.++.+...+ ..|.++|+.+++...... ......
T Consensus 165 iwd~~~--~~~~~~~~~h----~~~v~~v~~s~~~~~~~~s~~~d--------g~v~~wd~~~~~~~~~~~~~~~~~~v~ 230 (357)
T 4g56_B 165 VWDLSQ--KAVLKSYNAH----SSEVNCVAACPGKDTIFLSCGED--------GRILLWDTRKPKPATRIDFCASDTIPT 230 (357)
T ss_dssp EEETTT--TEEEEEECCC----SSCEEEEEECTTCSSCEEEEETT--------SCEEECCTTSSSCBCBCCCTTCCSCEE
T ss_pred EEECCC--CcEEEEEcCC----CCCEEEEEEccCCCceeeeeccC--------CceEEEECCCCceeeeeeecccccccc
Confidence 999987 543 333333 34567788999997655544332 358888998876543322 233456
Q ss_pred eeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceE
Q 004816 245 FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWN 323 (729)
Q Consensus 245 ~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~ 323 (729)
..+|+||+..++.+... ...|.++|+. +++. ...+.... ..+..++|+|||+ ++..... .+ .
T Consensus 231 ~v~~sp~~~~~la~g~~-------d~~i~~wd~~-~~~~--~~~~~~~~----~~v~~l~~sp~~~~~lasgs~-D~--~ 293 (357)
T 4g56_B 231 SVTWHPEKDDTFACGDE-------TGNVSLVNIK-NPDS--AQTSAVHS----QNITGLAYSYHSSPFLASISE-DC--T 293 (357)
T ss_dssp EEEECTTSTTEEEEEES-------SSCEEEEESS-CGGG--CEEECCCS----SCEEEEEECSSSSCCEEEEET-TS--C
T ss_pred chhhhhcccceEEEeec-------ccceeEEECC-CCcE--eEEEeccc----eeEEEEEEcCCCCCEEEEEeC-CC--E
Confidence 78999997665545422 2348999988 6654 44555554 5667889999986 6555544 34 4
Q ss_pred EEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEee
Q 004816 324 LHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 393 (729)
Q Consensus 324 l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~l 393 (729)
|.++|.++++..........+....|+| .++.++++...||...+|.+..++.....+
T Consensus 294 i~iwd~~~~~~~~~~~H~~~V~~vafsP------------~d~~~l~s~s~Dg~v~iW~~~~~~~~~~~i 351 (357)
T 4g56_B 294 VAVLDADFSEVFRDLSHRDFVTGVAWSP------------LDHSKFTTVGWDHKVLHHHLPSEGRTENLI 351 (357)
T ss_dssp EEEECTTSCEEEEECCCSSCEEEEEECS------------SSTTEEEEEETTSCEEEEECC---------
T ss_pred EEEEECCCCcEeEECCCCCCEEEEEEeC------------CCCCEEEEEcCCCeEEEEECCCCCcccccc
Confidence 6667888887666553333333334443 344566677788988888775544444333
No 299
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.98 E-value=7.9e-08 Score=98.09 Aligned_cols=237 Identities=14% Similarity=0.091 Sum_probs=140.3
Q ss_pred ceEEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEE
Q 004816 148 GAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (729)
Q Consensus 148 ~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~d 227 (729)
..|.++++.++++....+.|+++++++ + .+.+... ......+.++|||+.++ . ... ...|++++
T Consensus 33 ~~~d~~g~~l~~~~~~~~~i~~~~~~~--~-~~~~~~~----~~~~~~l~~~~dg~l~v-~-~~~-------~~~i~~~d 96 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVRQNRTWAWSDDG--Q-LSPEMHP----SHHQNGHCLNKQGHLIA-C-SHG-------LRRLERQR 96 (296)
T ss_dssp EEEEGGGTEEEEEEGGGTEEEEEETTS--C-EEEEESS----CSSEEEEEECTTCCEEE-E-ETT-------TTEEEEEC
T ss_pred CeEeCCCCEEEEEeCCCCEEEEEECCC--C-eEEEECC----CCCcceeeECCCCcEEE-E-ecC-------CCeEEEEc
Confidence 445555667889888888999999987 6 5555543 23346788999999533 3 221 14699999
Q ss_pred cCCCceEEeeeC-C----CeeeeeeeCCCCCeEEEEEec----------CCCCCCCCcEEEEEEecCCCCeeeeEEecCC
Q 004816 228 LNGQNIQVLVSG-S----DFYAFPRMDPRGERMAWIEWH----------HPNMPWDKAELWVGYISENGDVYKRVCVAGF 292 (729)
Q Consensus 228 l~~g~~~~lt~~-~----~~~~~~~~SPDG~~la~~~~~----------~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~ 292 (729)
.++|+.+.+... . ......+++|||+ |+++... .....-....||.++.+ ++. ..+. ..
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~--~~~~-~~ 170 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTL--SAPI-RD 170 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCE--EEEE-CC
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC--CCE--EEee-cC
Confidence 988887766432 1 1234678999997 5554310 00000013468888754 443 2222 22
Q ss_pred CCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcC-CCeE---EEeeccCccccCCcccccCcceeeeeecCCCCEE
Q 004816 293 DPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES-NNEV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLI 368 (729)
Q Consensus 293 ~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~-~g~~---~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l 368 (729)
. .....++|+|||+++ .++. ....|++++++ +|+. ..+. .. ... ....+.+. .++.+
T Consensus 171 ~----~~~~gi~~s~dg~~l-v~~~--~~~~i~~~~~~~~g~~~~~~~~~-~~-~~~------~p~~i~~d----~~G~l 231 (296)
T 3e5z_A 171 R----VKPNGLAFLPSGNLL-VSDT--GDNATHRYCLNARGETEYQGVHF-TV-EPG------KTDGLRVD----AGGLI 231 (296)
T ss_dssp C----SSEEEEEECTTSCEE-EEET--TTTEEEEEEECSSSCEEEEEEEE-CC-SSS------CCCSEEEB----TTSCE
T ss_pred C----CCCccEEECCCCCEE-EEeC--CCCeEEEEEECCCCcCcCCCeEe-eC-CCC------CCCeEEEC----CCCCE
Confidence 2 344678999999955 4443 33568888875 4554 2232 11 111 11234443 33456
Q ss_pred EEEEEECCeEEEEEEECCCCceEeeccCCcceEEe-e-eeCCEEEEEEeCCCCCceEEEEEcCCCcce
Q 004816 369 ACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNI-T-LGNDCLFVEGASGVEPSSVAKVTLDDHKLK 434 (729)
Q Consensus 369 ~~~s~~~g~~~ly~~d~~~g~~~~lt~~~~~v~~~-~-~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~ 434 (729)
++.. .+ .|++++.+++....+..+.. +..+ . .+++..+++++. ..+|++++++++++
T Consensus 232 ~v~~--~~--~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~----~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 232 WASA--GD--GVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS----TEFWSIETNVRGLE 290 (296)
T ss_dssp EEEE--TT--EEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEET----TEEEEEECSCCBCC
T ss_pred EEEc--CC--eEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcC----CeEEEEEccccccc
Confidence 5555 33 58888998776777766555 5555 3 344445555543 27999998887754
No 300
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.97 E-value=3.7e-07 Score=97.53 Aligned_cols=240 Identities=10% Similarity=0.027 Sum_probs=137.1
Q ss_pred eEEEECCEEEEE--ECCCCcEEEEeCCCCCCC----CeecCCCCCCCceeeecceecC-CCCEEEEEEeccCCCCCCcce
Q 004816 149 AFRIFGDTVIFS--NYKDQRLYKHSIDSKDSS----PLPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTT 221 (729)
Q Consensus 149 ~~~~~~~~i~~~--~~~~~~l~~~d~~~~~~~----~~~lt~~~~~~~~~~~~~~~SP-dG~~l~~~~~~~~~~~~~~~~ 221 (729)
.+.++++.+.+. ...++.|.+|++... +. ...+... ...+...+|+| +++.|+....+ .
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~-~~~~~~~~~~~~h----~~~V~~~~~~p~~~~~l~s~s~d---------g 104 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKT-GRVDKNVPLVCGH----TAPVLDIAWCPHNDNVIASGSED---------C 104 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCC-EECCTTCCCBCCC----SSCEEEEEECTTCTTEEEEEETT---------S
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccC-CCCCCCCceEecC----CCCEEEEEeCCCCCCEEEEEeCC---------C
Confidence 355556644443 455779999998641 21 1122222 35578899999 88876655443 4
Q ss_pred EEEEEEcCCCc--------eEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEe--cC
Q 004816 222 EIVAIALNGQN--------IQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV--AG 291 (729)
Q Consensus 222 ~l~~~dl~~g~--------~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~--~~ 291 (729)
.|.++++.++. ...+..........+|+|||+.++++... ...|.++|+. +++. ...+ ..
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~-------dg~i~iwd~~-~~~~--~~~~~~~~ 174 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC-------DNVILVWDVG-TGAA--VLTLGPDV 174 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET-------TSCEEEEETT-TTEE--EEEECTTT
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC-------CCEEEEEECC-CCCc--cEEEecCC
Confidence 68888988762 34455455667789999999544444422 2349999998 6654 3344 44
Q ss_pred CCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEE
Q 004816 292 FDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIAC 370 (729)
Q Consensus 292 ~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~ 370 (729)
.. ..+..+.|+|||+++++... .+ .|.++|+.+++..... ...... ....+.|.+ ++ .+++
T Consensus 175 ~~----~~v~~~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~-------~~~~~~~~~---~~-~~l~ 236 (402)
T 2aq5_A 175 HP----DTIYSVDWSRDGALICTSCR-DK--RVRVIEPRKGTVVAEKDRPHEGT-------RPVHAVFVS---EG-KILT 236 (402)
T ss_dssp CC----SCEEEEEECTTSSCEEEEET-TS--EEEEEETTTTEEEEEEECSSCSS-------SCCEEEECS---TT-EEEE
T ss_pred CC----CceEEEEECCCCCEEEEEec-CC--cEEEEeCCCCceeeeeccCCCCC-------cceEEEEcC---CC-cEEE
Confidence 44 56678899999994444433 23 5777888887655433 211110 012233432 44 4444
Q ss_pred EE-EECCeEEEEEEECCCCce--Eeec-cCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 371 SY-RQNGRSYLGILDDFGHSL--SLLD-IPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 371 ~s-~~~g~~~ly~~d~~~g~~--~~lt-~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
+. .......|.++|+.+++. .... .....+..+ ..+++..++.+++.+ ..++.+++.+++
T Consensus 237 ~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d--g~i~i~d~~~~~ 301 (402)
T 2aq5_A 237 TGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD--SSIRYFEITSEA 301 (402)
T ss_dssp EEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC--SCEEEEEECSST
T ss_pred EeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC--CeEEEEEecCCC
Confidence 44 223345677778776543 2222 223345555 444444555555433 356777777766
No 301
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.97 E-value=4.5e-07 Score=96.67 Aligned_cols=220 Identities=12% Similarity=0.060 Sum_probs=127.1
Q ss_pred eEEEECC-EEEEEECCCCcEEEEeCCCCCCCCe-ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEE
Q 004816 149 AFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (729)
Q Consensus 149 ~~~~~~~-~i~~~~~~~~~l~~~d~~~~~~~~~-~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~ 226 (729)
+..++++ ..+++...++.|.+||+.+ ++.. .+... ...+...+|+|||+.|+....+ ..|.++
T Consensus 128 ~v~~s~dg~~l~s~~~d~~i~iwd~~~--~~~~~~~~~h----~~~v~~~~~~p~~~~l~s~s~d---------~~v~iw 192 (393)
T 1erj_A 128 SVCFSPDGKFLATGAEDRLIRIWDIEN--RKIVMILQGH----EQDIYSLDYFPSGDKLVSGSGD---------RTVRIW 192 (393)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTT--TEEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEEE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCC--CcEEEEEccC----CCCEEEEEEcCCCCEEEEecCC---------CcEEEE
Confidence 3444433 4455566788999999987 5433 33333 3456788999999987765543 468889
Q ss_pred EcCCCceEEeeeCCCeeeeeeeCC-CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEe-------cCCCCCccc
Q 004816 227 ALNGQNIQVLVSGSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV-------AGFDPTIVE 298 (729)
Q Consensus 227 dl~~g~~~~lt~~~~~~~~~~~SP-DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~-------~~~~~~~~~ 298 (729)
|+.+++..............+|+| ||+.|+..+. ...|.++|+. ++... ..+ .+.. .
T Consensus 193 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~--------d~~v~iwd~~-~~~~~--~~~~~~~~~~~~h~----~ 257 (393)
T 1erj_A 193 DLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL--------DRAVRVWDSE-TGFLV--ERLDSENESGTGHK----D 257 (393)
T ss_dssp ETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEET--------TSCEEEEETT-TCCEE--EEEC------CCCS----S
T ss_pred ECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcC--------CCcEEEEECC-CCcEE--EeecccccCCCCCC----C
Confidence 999887655545555567789999 9998876662 2348888988 66542 222 2222 4
Q ss_pred cccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEE-------------EeeccCccccCCcccccCcceeeeeecCCC
Q 004816 299 SPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL-------------AIYSLDAEFSRPLWVFGINSYEIIQSHGEK 365 (729)
Q Consensus 299 ~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~-------------~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~ 365 (729)
.+..+.|+|||++++.... .+. |.++|+.+.... .+......+ ..+.|.+ ++
T Consensus 258 ~v~~v~~~~~g~~l~s~s~-d~~--v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v---------~~~~~~~---~~ 322 (393)
T 1erj_A 258 SVYSVVFTRDGQSVVSGSL-DRS--VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV---------LSVATTQ---ND 322 (393)
T ss_dssp CEEEEEECTTSSEEEEEET-TSE--EEEEEC---------------CEEEEEECCSSCE---------EEEEECG---GG
T ss_pred CEEEEEECCCCCEEEEEeC-CCE--EEEEECCCCCCcccccCCCCCcceEEEecccCcE---------EEEEECC---CC
Confidence 5667899999995555544 454 444455442211 111111111 1233432 44
Q ss_pred CEEEEEEEECCeEEEEEEECCCCceE-eeccCCcceEEe-eee------CCEEEEEEeC
Q 004816 366 NLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTDIDNI-TLG------NDCLFVEGAS 416 (729)
Q Consensus 366 ~~l~~~s~~~g~~~ly~~d~~~g~~~-~lt~~~~~v~~~-~~~------~~~~~~~~~~ 416 (729)
. ++++...++...| +|..+++.. .+......+..+ ..+ ++.+++.++.
T Consensus 323 ~-~l~sgs~D~~v~i--wd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~ 378 (393)
T 1erj_A 323 E-YILSGSKDRGVLF--WDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSG 378 (393)
T ss_dssp C-EEEEEETTSEEEE--EETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEET
T ss_pred C-EEEEEeCCCeEEE--EECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECC
Confidence 4 5556666776555 477776643 444445556665 222 3455555553
No 302
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=98.97 E-value=1.6e-10 Score=128.03 Aligned_cols=126 Identities=18% Similarity=0.237 Sum_probs=84.1
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccc-cchh--hh-HHHh-hCCcEEEEecCCCCC-CCc--hhHHHhh
Q 004816 472 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNL--SI-QYWT-SRGWAFVDVNYGGST-GYG--REFRERL 543 (729)
Q Consensus 472 l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~--~~-~~la-~~G~~v~~~d~rGs~-g~g--~~~~~~~ 543 (729)
+...+|.|.+.. +.++.|+||++|||++..... .+.. ++ +.++ ..|+.|+.+|||.+. |+. .......
T Consensus 106 l~l~v~~P~~~~----~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~ 181 (544)
T 1thg_A 106 LYLNVFRPAGTK----PDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEG 181 (544)
T ss_dssp CEEEEEEETTCC----TTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHT
T ss_pred eEEEEEeCCCCC----CCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccC
Confidence 444567776521 246789999999987544332 2221 11 1222 248999999999743 111 1111111
Q ss_pred ccCCCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHhC---------CCcceEEEEeccc
Q 004816 544 LGRWGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALAF---------RDTFKAGASLYGV 604 (729)
Q Consensus 544 ~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~---------~~~~~a~v~~~~~ 604 (729)
.+...+.|+.++++|+.++ ...|++||.|+|+|+||++++.++.. ..+|+++|+.+|.
T Consensus 182 ---~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 182 ---NTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp ---CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence 2334489999999999875 34699999999999999999877652 4679999999984
No 303
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.96 E-value=8.7e-07 Score=93.51 Aligned_cols=252 Identities=8% Similarity=-0.036 Sum_probs=138.5
Q ss_pred CceEEEECCEEEEEEC---------CCCcEEEEeCCCCCCCC-eecCCC-CC-C-CceeeecceecCCCCEEEEEEeccC
Q 004816 147 GGAFRIFGDTVIFSNY---------KDQRLYKHSIDSKDSSP-LPITPD-YG-E-PLVSYADGIFDPRFNRYVTVREDRR 213 (729)
Q Consensus 147 ~~~~~~~~~~i~~~~~---------~~~~l~~~d~~~~~~~~-~~lt~~-~~-~-~~~~~~~~~~SPdG~~l~~~~~~~~ 213 (729)
+..++++++.+++.+. .++.|.++|+.+ .+. ..+.-. .. . .......+.|||||++|++.....
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t--~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~- 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT--FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA- 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC--CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC-
Confidence 4456677777777753 234688999976 433 222211 00 0 001124678999999977764321
Q ss_pred CCCCCcceEEEEEEcCCCceEEe-eeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEE----
Q 004816 214 QDALNSTTEIVAIALNGQNIQVL-VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC---- 288 (729)
Q Consensus 214 ~~~~~~~~~l~~~dl~~g~~~~l-t~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~---- 288 (729)
...|.++| ++++.... ..-... +.+.|+|++.++... . ...+.++|. +++......
T Consensus 147 ------~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~-~------dg~~~~vd~--~g~~~~~~~~~~~ 207 (373)
T 2mad_H 147 ------GPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLC-A------QGGLAKTDH--AGGAAGAGLVGAM 207 (373)
T ss_pred ------CCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEc-C------CCCEEEEEC--CCcEEEEEecccc
Confidence 14699999 99877544 433222 345677776654432 2 123556665 233221110
Q ss_pred ecCCCCCccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEEeecc---CccccCCcccccCc-ceeeeeecC
Q 004816 289 VAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSL---DAEFSRPLWVFGIN-SYEIIQSHG 363 (729)
Q Consensus 289 ~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~---~~~~~~~~w~~~~~-~~~~l~~~~ 363 (729)
..+.. .....+.+++|+. ++|.+.. + .++.+|..++..+.+... ........|.+... .+.+.+
T Consensus 208 ~~~~~----p~~~~~~~~~~~~~~~~~~~~--~--~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~--- 276 (373)
T 2mad_H 208 LTAAQ----NLLTQPAQANKSGRIVWPVYS--G--KILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK--- 276 (373)
T ss_pred ccCCc----ceeecceeEecCCEEEEEcCC--c--eEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC---
Confidence 11111 1223466778876 7777643 3 789999877654433211 11112334554321 234443
Q ss_pred CCCEEEEEEEEC-------CeEEEEEEECCCCce-EeeccCCcc-eEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 364 EKNLIACSYRQN-------GRSYLGILDDFGHSL-SLLDIPFTD-IDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 364 ~~~~l~~~s~~~-------g~~~ly~~d~~~g~~-~~lt~~~~~-v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+++++|+..... +...|+++|++++++ +.|..+... -..++.+++.++|..... ...++.+|.++++.
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~--~~~V~ViD~~t~~v 353 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAG--TEVLHIYDAGAGDQ 353 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCC--CCeEEEEECCCCCE
Confidence 677788766431 235799999998876 566544322 222355666466654422 25799999998875
No 304
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.95 E-value=3.7e-07 Score=97.98 Aligned_cols=265 Identities=9% Similarity=0.023 Sum_probs=156.4
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcEE
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRLY 168 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l~ 168 (729)
.+..+.|+|.+.+..... .++...+|....+ +....+.. |...+.+..++++ .++++...++.|.
T Consensus 110 ~V~~~~~~p~~~~l~s~s---~Dg~i~vwd~~~~---~~~~~l~~--------h~~~V~~v~~~~~~~~l~sgs~D~~i~ 175 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSAS---EDATIKVWDYETG---DFERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIK 175 (410)
T ss_dssp CEEEEEECSSSSEEEEEE---SSSCEEEEETTTC---CCCEEECC--------CSSCEEEEEECTTSSEEEEEETTSCCC
T ss_pred cEEEEEEcCCCCEEEEEe---CCCeEEEEECCCC---cEEEEEec--------cCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 456788998333444433 4577778876443 22222211 1112333444432 4566666788899
Q ss_pred EEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE-EeeeCCCeeeee
Q 004816 169 KHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-VLVSGSDFYAFP 246 (729)
Q Consensus 169 ~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~-~lt~~~~~~~~~ 246 (729)
+||+.+ ++. +.+... ...+...+|+|+|+.|+....+ ..|.++|+.++... .+..........
T Consensus 176 iwd~~~--~~~~~~~~~h----~~~V~~v~~~p~~~~l~s~s~D---------~~i~~wd~~~~~~~~~~~~h~~~v~~~ 240 (410)
T 1vyh_C 176 LWDFQG--FECIRTMHGH----DHNVSSVSIMPNGDHIVSASRD---------KTIKMWEVQTGYCVKTFTGHREWVRMV 240 (410)
T ss_dssp EEETTS--SCEEECCCCC----SSCEEEEEECSSSSEEEEEETT---------SEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEeCCC--CceeEEEcCC----CCCEEEEEEeCCCCEEEEEeCC---------CeEEEEECCCCcEEEEEeCCCccEEEE
Confidence 999987 543 333333 3457888999999987665543 46899999988754 344444566778
Q ss_pred eeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCC------------------
Q 004816 247 RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK------------------ 308 (729)
Q Consensus 247 ~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspD------------------ 308 (729)
.|+|||+.|+-.+. ...|.++|+. +++. ...+.+.. ..+..+.|+|+
T Consensus 241 ~~~~~g~~l~s~s~--------D~~v~vwd~~-~~~~--~~~~~~h~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 1vyh_C 241 RPNQDGTLIASCSN--------DQTVRVWVVA-TKEC--KAELREHR----HVVECISWAPESSYSSISEATGSETKKSG 305 (410)
T ss_dssp EECTTSSEEEEEET--------TSCEEEEETT-TCCE--EEEECCCS----SCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred EECCCCCEEEEEcC--------CCeEEEEECC-CCce--eeEecCCC----ceEEEEEEcCcccccchhhhccccccccC
Confidence 99999998876652 2348888987 5654 33444444 45566788886
Q ss_pred --CcEEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEEC
Q 004816 309 --GELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 385 (729)
Q Consensus 309 --G~l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~ 385 (729)
|.+++.... .+ .|.++|+.+++..... .....+. .+.|.+ +++ ++++...++...|| |.
T Consensus 306 ~~g~~l~sgs~-D~--~i~iwd~~~~~~~~~~~~h~~~v~---------~v~~~~---~g~-~l~s~s~D~~i~vw--d~ 367 (410)
T 1vyh_C 306 KPGPFLLSGSR-DK--TIKMWDVSTGMCLMTLVGHDNWVR---------GVLFHS---GGK-FILSCADDKTLRVW--DY 367 (410)
T ss_dssp --CCEEEEEET-TS--EEEEEETTTTEEEEEEECCSSCEE---------EEEECS---SSS-CEEEEETTTEEEEE--CC
T ss_pred CCCCEEEEEeC-CC--eEEEEECCCCceEEEEECCCCcEE---------EEEEcC---CCC-EEEEEeCCCeEEEE--EC
Confidence 444444443 33 5677788887654333 2222222 234442 444 55566678876666 55
Q ss_pred CCCc-eEeeccCCcceEEe-eeeCCEEEEEEeC
Q 004816 386 FGHS-LSLLDIPFTDIDNI-TLGNDCLFVEGAS 416 (729)
Q Consensus 386 ~~g~-~~~lt~~~~~v~~~-~~~~~~~~~~~~~ 416 (729)
.+++ ...+......|..+ ..+++.+++.++.
T Consensus 368 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~ 400 (410)
T 1vyh_C 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400 (410)
T ss_dssp TTSCCCEEEECCSSCEEEEEECSSSSCEEEEET
T ss_pred CCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeC
Confidence 5544 45555555667777 4444445555443
No 305
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.95 E-value=1.4e-07 Score=101.31 Aligned_cols=247 Identities=11% Similarity=0.038 Sum_probs=147.1
Q ss_pred ceEEEECC-EEEEEECCCCcEEEEeCCCCCCC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEE
Q 004816 148 GAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (729)
Q Consensus 148 ~~~~~~~~-~i~~~~~~~~~l~~~d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~ 225 (729)
.+..++++ .++++...++.|.+||+.+ ++ .+.+... ...+...+|+|+|+.|+....+ ..|.+
T Consensus 112 ~~~~~~p~~~~l~s~s~Dg~i~vwd~~~--~~~~~~l~~h----~~~V~~v~~~~~~~~l~sgs~D---------~~i~i 176 (410)
T 1vyh_C 112 TRVIFHPVFSVMVSASEDATIKVWDYET--GDFERTLKGH----TDSVQDISFDHSGKLLASCSAD---------MTIKL 176 (410)
T ss_dssp EEEEECSSSSEEEEEESSSCEEEEETTT--CCCCEEECCC----SSCEEEEEECTTSSEEEEEETT---------SCCCE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCC--CcEEEEEecc----CCcEEEEEEcCCCCEEEEEeCC---------CeEEE
Confidence 34444433 5666777788999999987 44 3445443 3457888999999987665543 34778
Q ss_pred EEcCCCceEEe-eeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCce
Q 004816 226 IALNGQNIQVL-VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 304 (729)
Q Consensus 226 ~dl~~g~~~~l-t~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 304 (729)
+|+.+++.... ..........+|+|||+.|+..+. ...|.++|+. ++.. ...+.+.. ..+..+.
T Consensus 177 wd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~--------D~~i~~wd~~-~~~~--~~~~~~h~----~~v~~~~ 241 (410)
T 1vyh_C 177 WDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR--------DKTIKMWEVQ-TGYC--VKTFTGHR----EWVRMVR 241 (410)
T ss_dssp EETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEET--------TSEEEEEETT-TCCE--EEEEECCS----SCEEEEE
T ss_pred EeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeC--------CCeEEEEECC-CCcE--EEEEeCCC----ccEEEEE
Confidence 89988765443 333455678899999998876652 3459999998 6764 44455554 4566788
Q ss_pred eCCCCcEEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeee-------ecCCCCEEEEEEEECC
Q 004816 305 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQ-------SHGEKNLIACSYRQNG 376 (729)
Q Consensus 305 wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~-------~~~~~~~l~~~s~~~g 376 (729)
|+|||++++.... .+. |.++|..+++..... .....+....|.+......... .....+.++++...++
T Consensus 242 ~~~~g~~l~s~s~-D~~--v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~ 318 (410)
T 1vyh_C 242 PNQDGTLIASCSN-DQT--VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318 (410)
T ss_dssp ECTTSSEEEEEET-TSC--EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS
T ss_pred ECCCCCEEEEEcC-CCe--EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC
Confidence 9999995555544 344 555577776544332 2222222233333110000000 0001234667777777
Q ss_pred eEEEEEEECCCCce-EeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 377 RSYLGILDDFGHSL-SLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 377 ~~~ly~~d~~~g~~-~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
...|| |+.+++. ..+......+..+ ..+++.+++.++.. ..+..+|+.+++
T Consensus 319 ~i~iw--d~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D---~~i~vwd~~~~~ 371 (410)
T 1vyh_C 319 TIKMW--DVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD---KTLRVWDYKNKR 371 (410)
T ss_dssp EEEEE--ETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETT---TEEEEECCTTSC
T ss_pred eEEEE--ECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCc
Confidence 65555 7766653 3444455567776 44555566655543 367777776654
No 306
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.94 E-value=1.2e-07 Score=98.39 Aligned_cols=224 Identities=13% Similarity=0.035 Sum_probs=130.5
Q ss_pred eEEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEc
Q 004816 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (729)
Q Consensus 149 ~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl 228 (729)
.|.++++.++|+....++|+++++++ ++.+.+... .....+.|+|||+.++.. . ..|+++|+
T Consensus 55 ~~~~~~~~l~~~d~~~~~i~~~d~~~--~~~~~~~~~-----~~v~~i~~~~dg~l~v~~-~----------~gl~~~d~ 116 (326)
T 2ghs_A 55 TFDPASGTAWWFNILERELHELHLAS--GRKTVHALP-----FMGSALAKISDSKQLIAS-D----------DGLFLRDT 116 (326)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEETTT--TEEEEEECS-----SCEEEEEEEETTEEEEEE-T----------TEEEEEET
T ss_pred eEeCCCCEEEEEECCCCEEEEEECCC--CcEEEEECC-----CcceEEEEeCCCeEEEEE-C----------CCEEEEEC
Confidence 34444568888887778999999987 665554432 235667899999866543 1 24999999
Q ss_pred CCCceEEeeeCC-----CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCc
Q 004816 229 NGQNIQVLVSGS-----DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 303 (729)
Q Consensus 229 ~~g~~~~lt~~~-----~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~ 303 (729)
++++.+.+.... .......++|||+ |++....... ......||+++ + ++... +..+. .....+
T Consensus 117 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~-~~~~~~l~~~~-~--g~~~~--~~~~~-----~~~~~i 184 (326)
T 2ghs_A 117 ATGVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKA-ETGAGSIYHVA-K--GKVTK--LFADI-----SIPNSI 184 (326)
T ss_dssp TTCCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTC-CTTCEEEEEEE-T--TEEEE--EEEEE-----SSEEEE
T ss_pred CCCcEEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcC-CCCceEEEEEe-C--CcEEE--eeCCC-----cccCCe
Confidence 999887775421 2356779999998 5555432211 11235689888 4 55422 22221 223468
Q ss_pred eeCCCCc-EEEEEecCCCceEEEEEEcC--CC-eE---EEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECC
Q 004816 304 KWSSKGE-LFFVTDRKNGFWNLHKWIES--NN-EV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 376 (729)
Q Consensus 304 ~wspDG~-l~~~~~~~~g~~~l~~~d~~--~g-~~---~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g 376 (729)
+|+|||+ +|+. +. ....|++++.+ +| +. +.+.... ...+.+ +.+.+. .++.+++.....+
T Consensus 185 ~~s~dg~~lyv~-~~--~~~~I~~~d~~~~~Gl~~~~~~~~~~~~----~~~~~p--~gi~~d----~~G~lwva~~~~~ 251 (326)
T 2ghs_A 185 CFSPDGTTGYFV-DT--KVNRLMRVPLDARTGLPTGKAEVFIDST----GIKGGM--DGSVCD----AEGHIWNARWGEG 251 (326)
T ss_dssp EECTTSCEEEEE-ET--TTCEEEEEEBCTTTCCBSSCCEEEEECT----TSSSEE--EEEEEC----TTSCEEEEEETTT
T ss_pred EEcCCCCEEEEE-EC--CCCEEEEEEcccccCCcccCceEEEECC----CCCCCC--CeeEEC----CCCCEEEEEeCCC
Confidence 9999998 6554 33 23578888875 55 32 2222111 011111 223332 3344555443233
Q ss_pred eEEEEEEECCCCceEeeccCCcceEEe-e--eeCCEEEEEEeCC
Q 004816 377 RSYLGILDDFGHSLSLLDIPFTDIDNI-T--LGNDCLFVEGASG 417 (729)
Q Consensus 377 ~~~ly~~d~~~g~~~~lt~~~~~v~~~-~--~~~~~~~~~~~~~ 417 (729)
.|++++.+++..+.+..+...+..+ . ++++.+++.....
T Consensus 252 --~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 252 --AVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp --EEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred --EEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 6888898766666776665556666 3 2334555544433
No 307
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.94 E-value=1.7e-07 Score=95.85 Aligned_cols=226 Identities=12% Similarity=0.169 Sum_probs=131.5
Q ss_pred eEEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEc
Q 004816 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (729)
Q Consensus 149 ~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl 228 (729)
.|.++++.++|++...++|+++++++ ++.+.+... .....+.++|||+.++. . . ..|+++|+
T Consensus 19 ~w~~~~~~l~~~d~~~~~i~~~d~~~--~~~~~~~~~-----~~~~~i~~~~dG~l~v~-~-~---------~~l~~~d~ 80 (297)
T 3g4e_A 19 VWEEVSNSLLFVDIPAKKVCRWDSFT--KQVQRVTMD-----APVSSVALRQSGGYVAT-I-G---------TKFCALNW 80 (297)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTT--CCEEEEECS-----SCEEEEEEBTTSSEEEE-E-T---------TEEEEEET
T ss_pred eEECCCCEEEEEECCCCEEEEEECCC--CcEEEEeCC-----CceEEEEECCCCCEEEE-E-C---------CeEEEEEC
Confidence 44444568999988888999999987 655544332 34567889999994333 2 1 46999999
Q ss_pred CCCceEEeeeCC-----CeeeeeeeCCCCCeEEEEEecCCCC----CCCCcEEEEEEecCCCCeeeeEEecCCCCCcccc
Q 004816 229 NGQNIQVLVSGS-----DFYAFPRMDPRGERMAWIEWHHPNM----PWDKAELWVGYISENGDVYKRVCVAGFDPTIVES 299 (729)
Q Consensus 229 ~~g~~~~lt~~~-----~~~~~~~~SPDG~~la~~~~~~~~~----~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~ 299 (729)
++++.+.+.... ...+...++|||+ |++........ ......||.++.+ ++... +.... ..
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~--g~~~~--~~~~~-----~~ 150 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD--HHVKK--YFDQV-----DI 150 (297)
T ss_dssp TTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT--SCEEE--EEEEE-----SB
T ss_pred CCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC--CCEEE--Eeecc-----cc
Confidence 998887775421 2345678999998 66655432210 0123568888754 44322 22222 23
Q ss_pred ccCceeCCCCc-EEEEEecCCCceEEEEEEc--CCCeEE---EeeccCccccCCcccccCcceeeeeecCCCCEEEEEEE
Q 004816 300 PTEPKWSSKGE-LFFVTDRKNGFWNLHKWIE--SNNEVL---AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR 373 (729)
Q Consensus 300 ~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~--~~g~~~---~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~ 373 (729)
...++|+|||+ +|+.... ...|++++. .+|+.. .+........ ..+.+.+. .++.|++...
T Consensus 151 pngi~~spdg~~lyv~~~~---~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~------~p~g~~~d----~~G~lwva~~ 217 (297)
T 3g4e_A 151 SNGLDWSLDHKIFYYIDSL---SYSVDAFDYDLQTGQISNRRSVYKLEKEEQ------IPDGMCID----AEGKLWVACY 217 (297)
T ss_dssp EEEEEECTTSCEEEEEEGG---GTEEEEEEECTTTCCEEEEEEEEECCGGGC------EEEEEEEB----TTSCEEEEEE
T ss_pred ccceEEcCCCCEEEEecCC---CCcEEEEeccCCCCcccCcEEEEECCCCCC------CCCeeEEC----CCCCEEEEEc
Confidence 35789999999 5554433 345777665 566532 2221111001 11233333 3345665554
Q ss_pred ECCeEEEEEEECCCCc-eEeeccCCcceEEe-e--eeCCEEEEEEeCC
Q 004816 374 QNGRSYLGILDDFGHS-LSLLDIPFTDIDNI-T--LGNDCLFVEGASG 417 (729)
Q Consensus 374 ~~g~~~ly~~d~~~g~-~~~lt~~~~~v~~~-~--~~~~~~~~~~~~~ 417 (729)
..+ .|+++++++|+ +..+..+...+..+ . ++++.+++.++..
T Consensus 218 ~~~--~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 218 NGG--RVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp TTT--EEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred CCC--EEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 333 58889998665 45665555556655 2 3445666655543
No 308
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.93 E-value=1.1e-07 Score=101.99 Aligned_cols=285 Identities=8% Similarity=0.013 Sum_probs=160.2
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEc----CCCCCCC------CcccCCCCCccc--ccccccCCceEEEECC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKE----PAKAGDE------PSDITPKEYAVR--TTAQEYGGGAFRIFGD 155 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~----~~~~~g~------~~~l~~~~~~~~--~~~~~~~~~~~~~~~~ 155 (729)
..+..+.|+| ++.++.+.. .++...+|.. ..+ + ....+...+... ...+.....+..++++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~---~dg~i~iw~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 119 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGE---KNSVARLARIVETDQEG---KKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD 119 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEE---TBTEEEEEEEEEC---------CEEEEEEEEEECCCCCC------CBCEEEEEECTT
T ss_pred CceEEEEECCCCCcEEEEec---CCceEEEEEEecccCCc---cccccccccccccccccccccccCCCCceEEEEEcCC
Confidence 4567899999 662444443 3577788877 433 3 111111111000 0001112344445433
Q ss_pred -EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE
Q 004816 156 -TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (729)
Q Consensus 156 -~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~ 234 (729)
.++++...++.|.+|+..+ .....+... ...+..+.|+|||+.|+....+ ..|.++++.+++..
T Consensus 120 ~~~l~~~~~dg~i~i~~~~~--~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWNKTG--ALLNVLNFH----RAPIVSVKWNKDGTHIISMDVE---------NVTILWNVISGTVM 184 (425)
T ss_dssp SSEEEEEETTSCEEEEETTS--CEEEEECCC----CSCEEEEEECTTSSEEEEEETT---------CCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCeEEEEeCCC--CeeeeccCC----CccEEEEEECCCCCEEEEEecC---------CeEEEEECCCCcEE
Confidence 3445555678899999654 555555544 3456888999999988766543 45889999887654
Q ss_pred EeeeC-CCe---------------eeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccc
Q 004816 235 VLVSG-SDF---------------YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 298 (729)
Q Consensus 235 ~lt~~-~~~---------------~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~ 298 (729)
..... ... .....|+|++. ++... ....|+++|+. +++. ...+.... .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~g~i~~~d~~-~~~~--~~~~~~~~----~ 248 (425)
T 1r5m_A 185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPG--------PKGAIFVYQIT-EKTP--TGKLIGHH----G 248 (425)
T ss_dssp EEECCC---------------CCCBSCCEEEETTE-EEEEC--------GGGCEEEEETT-CSSC--SEEECCCS----S
T ss_pred EEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEc--------CCCeEEEEEcC-CCce--eeeeccCC----C
Confidence 43322 222 56678999875 44443 23459999998 5654 34444444 5
Q ss_pred cccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCe
Q 004816 299 SPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR 377 (729)
Q Consensus 299 ~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~ 377 (729)
.+..+.|+|||++++.... .+ .|.++|..+++..... .....+. .+.|.+ ++ ++++...++.
T Consensus 249 ~i~~~~~~~~~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~i~---------~~~~~~---~~--~l~~~~~d~~ 311 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASD-DG--TLRIWHGGNGNSQNCFYGHSQSIV---------SASWVG---DD--KVISCSMDGS 311 (425)
T ss_dssp CEEEEEEETTTTEEEEEET-TS--CEEEECSSSBSCSEEECCCSSCEE---------EEEEET---TT--EEEEEETTSE
T ss_pred ceEEEEECCCCCEEEEEcC-CC--EEEEEECCCCccceEecCCCccEE---------EEEECC---CC--EEEEEeCCCc
Confidence 5677899999994444443 34 4666777776543333 2222222 234432 44 5566666665
Q ss_pred EEEEEEECCCCceE-eeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 378 SYLGILDDFGHSLS-LLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 378 ~~ly~~d~~~g~~~-~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
. +++++.+++.. .+......+..+ ..+++.+++.++.. ..++++++.+++
T Consensus 312 i--~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~i~~~~~~~ 363 (425)
T 1r5m_A 312 V--RLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD---GQVNVYDLKKLN 363 (425)
T ss_dssp E--EEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT---SCEEEEECHHHH
T ss_pred E--EEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC---CeEEEEECCCCc
Confidence 4 45577666644 334445567666 44445555555533 367777776654
No 309
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.93 E-value=2.6e-07 Score=95.50 Aligned_cols=207 Identities=12% Similarity=0.104 Sum_probs=125.2
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccc-cccccCCceEEEECC-EEEEEECCCC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRT-TAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~i~~~~~~~~ 165 (729)
..+..+.|+| +..+..... .++...+|..... ....-. ..+. .-|........++.+ ..+++...++
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s---~D~~v~~W~~~~~---~~~~~~----~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSAS---RDKTLISWKLTGD---DQKFGV----PVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEE---TTSEEEEEEEEEE---TTEEEE----EEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceEEEEEccCCCccEEEEec---CCccEEEecCCCC---Cccccc----cceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 3456788998 667766655 4577778866432 110000 0000 001222333444433 4566666788
Q ss_pred cEEEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeee
Q 004816 166 RLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYA 244 (729)
Q Consensus 166 ~l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~ 244 (729)
.|.+||+.+ ++. +.+... ...+....|+|+|+.|+....+ ..|.++|+.+.....+........
T Consensus 88 ~v~~wd~~~--~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~D---------~~i~vwd~~~~~~~~~~~h~~~v~ 152 (319)
T 3frx_A 88 TLRLWDVAT--GETYQRFVGH----KSDVMSVDIDKKASMIISGSRD---------KTIKVWTIKGQCLATLLGHNDWVS 152 (319)
T ss_dssp EEEEEETTT--TEEEEEEECC----SSCEEEEEECTTSCEEEEEETT---------SCEEEEETTSCEEEEECCCSSCEE
T ss_pred EEEEEECCC--CCeeEEEccC----CCcEEEEEEcCCCCEEEEEeCC---------CeEEEEECCCCeEEEEeccCCcEE
Confidence 999999987 543 334433 3456788899999987766553 357888998766666655555667
Q ss_pred eeeeCCCC------CeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecC
Q 004816 245 FPRMDPRG------ERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRK 318 (729)
Q Consensus 245 ~~~~SPDG------~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~ 318 (729)
..+|+|++ ..|+-.+ . ...|.++|+. +++. ...+.+.. ..+..+.|+|||++++....
T Consensus 153 ~~~~~~~~~~~~~~~~l~s~~-~-------d~~i~~wd~~-~~~~--~~~~~~h~----~~v~~~~~sp~g~~l~s~~~- 216 (319)
T 3frx_A 153 QVRVVPNEKADDDSVTIISAG-N-------DKMVKAWNLN-QFQI--EADFIGHN----SNINTLTASPDGTLIASAGK- 216 (319)
T ss_dssp EEEECCC------CCEEEEEE-T-------TSCEEEEETT-TTEE--EEEECCCC----SCEEEEEECTTSSEEEEEET-
T ss_pred EEEEccCCCCCCCccEEEEEe-C-------CCEEEEEECC-cchh--heeecCCC----CcEEEEEEcCCCCEEEEEeC-
Confidence 77888854 4565444 2 2348888987 5543 33445554 56677899999995555544
Q ss_pred CCceEEEEEEcCCCeEEEee
Q 004816 319 NGFWNLHKWIESNNEVLAIY 338 (729)
Q Consensus 319 ~g~~~l~~~d~~~g~~~~l~ 338 (729)
.+ .|.++|+.+++.....
T Consensus 217 dg--~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 217 DG--EIMLWNLAAKKAMYTL 234 (319)
T ss_dssp TC--EEEEEETTTTEEEEEE
T ss_pred CC--eEEEEECCCCcEEEEe
Confidence 34 4666788887654443
No 310
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.92 E-value=2.2e-08 Score=107.39 Aligned_cols=290 Identities=11% Similarity=-0.029 Sum_probs=158.6
Q ss_pred ccCceEEcC-CCcEEEEeecC-------CCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEE
Q 004816 90 RLGGTAVDG-HGRLIWLESRP-------TEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFS 160 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~-------~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~ 160 (729)
.+..+.|+| ++.++.+.... ..++...+|..... ...+.+.... +.....+..++++ .+++.
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~--~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~ 84 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAA--DSEKPIASLQ-------VDSKFNDLDWSHNNKIIAG 84 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSG--GGCSCSCCCC-------CSSCEEEEEECSSSSCEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCC--CCCcEEEEEe-------cCCceEEEEECCCCCeEEE
Confidence 456889999 77676665221 24677778876543 1111111101 1112334444433 34445
Q ss_pred ECCCCcEEEEeCCC---CCCCCeecCCCCCCCceeeecceecCC-CCEEEEEEeccCCCCCCcceEEEEEEcCCCc----
Q 004816 161 NYKDQRLYKHSIDS---KDSSPLPITPDYGEPLVSYADGIFDPR-FNRYVTVREDRRQDALNSTTEIVAIALNGQN---- 232 (729)
Q Consensus 161 ~~~~~~l~~~d~~~---~~~~~~~lt~~~~~~~~~~~~~~~SPd-G~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~---- 232 (729)
...++.|.+|++.+ +......+... ...+...+|+|| ++.|+.... + ..|+++|+.+++
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~l~s~~~-d--------g~v~iwd~~~~~~~~~ 151 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSMARFSNH----SSSVKTVKFNAKQDNVLASGGN-N--------GEIFIWDMNKCTESPS 151 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEEEECCCS----SSCCCEEEECSSSTTBEEEECS-S--------SCEEBCBTTTTSSCTT
T ss_pred EccCCeEEEeecccccccccchhhccCC----ccceEEEEEcCCCCCEEEEEcC-C--------CeEEEEECCCCccccc
Confidence 55678899999875 10123334433 345678899999 665544433 2 458889998875
Q ss_pred --eE-Ee---eeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCC------CCCccccc
Q 004816 233 --IQ-VL---VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF------DPTIVESP 300 (729)
Q Consensus 233 --~~-~l---t~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~------~~~~~~~~ 300 (729)
.. .+ ..........+|+|||..++++... ...|.++|+. +++. ...+... . ..+
T Consensus 152 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-------dg~v~iwd~~-~~~~--~~~~~~~~~~~~~~----~~v 217 (416)
T 2pm9_A 152 NYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS-------SNFASIWDLK-AKKE--VIHLSYTSPNSGIK----QQL 217 (416)
T ss_dssp TCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS-------SSCEEEEETT-TTEE--EEEECCCCCSSCCC----CCE
T ss_pred cccccccccccCCCCCeeEEEeCCCCCcEEEEEcC-------CCCEEEEECC-CCCc--ceEEeccccccccC----Cce
Confidence 21 22 2233456678999995444444422 2349999998 5654 3333332 2 456
Q ss_pred cCceeCCCCc-EEEEEecCCCceEEEEEEcCCC-eEEEeec--cCccccCCcccccCcceeeeeecCCCCEEEEEEEECC
Q 004816 301 TEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN-EVLAIYS--LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 376 (729)
Q Consensus 301 ~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g-~~~~l~~--~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g 376 (729)
..+.|+|||. +++......+...|.++|+.++ +...... ....+.. +.|.+ +++.++++...+|
T Consensus 218 ~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~---------~~~s~---~~~~~l~s~~~dg 285 (416)
T 2pm9_A 218 SVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILS---------LDWCH---QDEHLLLSSGRDN 285 (416)
T ss_dssp EEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEE---------EEECS---SCSSCEEEEESSS
T ss_pred EEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeE---------EEeCC---CCCCeEEEEeCCC
Confidence 7789999986 6666554122235667787765 2222221 2222222 33332 3555666777777
Q ss_pred eEEEEEEECCCCce-EeeccCCcceEEe-eeeCC-EEEEEEeCCCCCceEEEEEcCCCc
Q 004816 377 RSYLGILDDFGHSL-SLLDIPFTDIDNI-TLGND-CLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 377 ~~~ly~~d~~~g~~-~~lt~~~~~v~~~-~~~~~-~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
...|| ++.+++. ..+......+..+ ..+++ .+++..+.. ..+.++++.+++
T Consensus 286 ~v~~w--d~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d---~~i~iw~~~~~~ 339 (416)
T 2pm9_A 286 TVLLW--NPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD---NKIEVQTLQNLT 339 (416)
T ss_dssp EEEEE--CSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS---SEEEEEESCCCC
T ss_pred CEEEe--eCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC---CcEEEEEccCCC
Confidence 65555 6666553 4454445556555 33333 555555433 457777777654
No 311
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.92 E-value=6.6e-09 Score=103.02 Aligned_cols=191 Identities=9% Similarity=-0.026 Sum_probs=110.6
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
.|.|+++||.+++ ...|..++..|. .+|.|+.+|++|.. ...+++.+.++.+. ..+
T Consensus 22 ~~~l~~~hg~~~~--~~~~~~~~~~l~-~~~~v~~~d~~g~~----------------~~~~~~~~~i~~~~-----~~~ 77 (244)
T 2cb9_A 22 GKNLFCFPPISGF--GIYFKDLALQLN-HKAAVYGFHFIEED----------------SRIEQYVSRITEIQ-----PEG 77 (244)
T ss_dssp SSEEEEECCTTCC--GGGGHHHHHHTT-TTSEEEEECCCCST----------------THHHHHHHHHHHHC-----SSS
T ss_pred CCCEEEECCCCCC--HHHHHHHHHHhC-CCceEEEEcCCCHH----------------HHHHHHHHHHHHhC-----CCC
Confidence 4679999997443 355666667665 58999999998631 12455665555442 135
Q ss_pred cEEEEEcChHHHHHHHHHh----CCCcceEEEEeccccChhHHh-----hhcch-hhhhhhhhhcCChhhhhhcCc-ccc
Q 004816 572 RLCITGGSAGGYTTLAALA----FRDTFKAGASLYGVADLSMLR-----AETHK-FESRYIDNLVGSEKDYYEKSP-INF 640 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~----~~~~~~a~v~~~~~~d~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~sp-~~~ 640 (729)
++.++|||+||.+++.++. .+++++++++..+......+. ..... +.......+......+..+.. ...
T Consensus 78 ~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (244)
T 2cb9_A 78 PYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTENDDSAAYLPEAVRETVMQKKRCYQEYWAQLIN 157 (244)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC-------CCSCHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 7999999999999998886 367888888887653210000 00000 000000000000001111100 123
Q ss_pred cCCCCCCEEEEEeC--CCCCCChHHHHHHHHHHHhC-CCCEEEEEECCCCcc-cCCcccHHHHHHHHHHHHHHHhC
Q 004816 641 VDKFSCPIILFQGL--EDKVVPPDQARKIYKALKEN-GLPVALVEYEGEQHG-FRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 641 ~~~i~~PvL~i~G~--~D~~vp~~~~~~~~~~l~~~-g~~~~~~~~~~~gH~-~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
..++++|+++++|+ +|. ++++... .+... ..+++++++++ +|. +...+......+.+.+|+.+...
T Consensus 158 ~~~i~~Pvl~i~g~~~~D~-~~~~~~~----~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i~~~L~~~~~ 227 (244)
T 2cb9_A 158 EGRIKSNIHFIEAGIQTET-SGAMVLQ----KWQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANIILNILDKINS 227 (244)
T ss_dssp CSCBSSEEEEEECSBCSCC-CHHHHTT----SSGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHHHHHHHTC--
T ss_pred CCCcCCCEEEEEccCcccc-ccccchh----HHHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHHHHHHhcCcc
Confidence 46788999999999 887 3333222 22221 23689999997 883 33445666777788888876554
No 312
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.91 E-value=1.9e-07 Score=99.26 Aligned_cols=239 Identities=8% Similarity=-0.073 Sum_probs=144.7
Q ss_pred CceEEEECCEEEEEECCCCcEEEEeCCCCCCC-------CeecCCCCCCCceeeecceecCC----C---CEEEEEEecc
Q 004816 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSS-------PLPITPDYGEPLVSYADGIFDPR----F---NRYVTVREDR 212 (729)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~-------~~~lt~~~~~~~~~~~~~~~SPd----G---~~l~~~~~~~ 212 (729)
+.+..+++ .++++...++.|.+|++.+ ++ ...+... ...+....|+|+ | +.|+....+
T Consensus 19 i~~~~~~~-~~l~s~~~dg~i~iw~~~~--~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~g~~~~~l~s~~~d- 90 (397)
T 1sq9_A 19 IFSVSACN-SFTVSCSGDGYLKVWDNKL--LDNENPKDKSYSHFVH----KSGLHHVDVLQAIERDAFELCLVATTSFS- 90 (397)
T ss_dssp EEEEEECS-SEEEEEETTSEEEEEESBC--CTTCCGGGGEEEEECC----TTCEEEEEEEEEEETTTEEEEEEEEEETT-
T ss_pred eEEEEecC-CeEEEEcCCCEEEEEECCC--cccccCCCcceEEecC----CCcEEEEEEecccccCCccccEEEEEcCC-
Confidence 34455556 4566666788999999987 54 3344433 345678889999 8 877666543
Q ss_pred CCCCCCcceEEEEEEcCCCc------eEEeeeC-----CCeeeeeeeC----CCCCe-EEEEEecCCCCCCCCcEEEEEE
Q 004816 213 RQDALNSTTEIVAIALNGQN------IQVLVSG-----SDFYAFPRMD----PRGER-MAWIEWHHPNMPWDKAELWVGY 276 (729)
Q Consensus 213 ~~~~~~~~~~l~~~dl~~g~------~~~lt~~-----~~~~~~~~~S----PDG~~-la~~~~~~~~~~~~~~~l~~~d 276 (729)
..|+++++.+++ .+.+... ........|+ |||+. |+.... ...|+++|
T Consensus 91 --------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--------dg~i~iwd 154 (397)
T 1sq9_A 91 --------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV--------KGTTYIWK 154 (397)
T ss_dssp --------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET--------TSCEEEEE
T ss_pred --------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC--------CCcEEEEe
Confidence 358888888776 4455443 2567788999 99998 776552 23488888
Q ss_pred ecCC------CCeee---e-EEe------cCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeecc
Q 004816 277 ISEN------GDVYK---R-VCV------AGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSL 340 (729)
Q Consensus 277 ~~~~------g~~~~---~-~~~------~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~ 340 (729)
+. + ++... . .+. .... ..+..+.|+||| +++.... .+ .|.++|+.+++.......
T Consensus 155 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~-~l~~~~~-dg--~i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 155 FH-PFADESNSLTLNWSPTLELQGTVESPMTPS----QFATSVDISERG-LIATGFN-NG--TVQISELSTLRPLYNFES 225 (397)
T ss_dssp EE-SSSSHHHHTTTCCCCEEEEEEEECCSSSSC----CCCCEEEECTTS-EEEEECT-TS--EEEEEETTTTEEEEEEEC
T ss_pred CC-ccccccccceeeccCcceeeeeeccccCCC----CCceEEEECCCc-eEEEEeC-CC--cEEEEECCCCceeEEEec
Confidence 87 4 33211 0 121 1222 456788999999 6666544 34 577778887765544432
Q ss_pred -------CccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce-Eeecc-------------CCcc
Q 004816 341 -------DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-SLLDI-------------PFTD 399 (729)
Q Consensus 341 -------~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~-~~lt~-------------~~~~ 399 (729)
...+... .|.+ +++.|+..+...+...|.++|+.+++. ..+.. ....
T Consensus 226 ~~~h~~~~~~i~~i---------~~~~---~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (397)
T 1sq9_A 226 QHSMINNSNSIRSV---------KFSP---QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 293 (397)
T ss_dssp CC---CCCCCEEEE---------EECS---STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC
T ss_pred cccccccCCccceE---------EECC---CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc
Confidence 3233333 3332 666666555544446777888877664 34444 3455
Q ss_pred eEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 400 IDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 400 v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+..+ ..+++.+++.++.. ..++++|+.+++.
T Consensus 294 v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~ 325 (397)
T 1sq9_A 294 VMSLSFNDSGETLCSAGWD---GKLRFWDVKTKER 325 (397)
T ss_dssp EEEEEECSSSSEEEEEETT---SEEEEEETTTTEE
T ss_pred EEEEEECCCCCEEEEEeCC---CeEEEEEcCCCce
Confidence 6666 44455555555533 4788888887753
No 313
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.91 E-value=3.5e-07 Score=97.20 Aligned_cols=212 Identities=11% Similarity=0.025 Sum_probs=117.9
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCce--EEEE---CC---EEEEEE
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGA--FRIF---GD---TVIFSN 161 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~--~~~~---~~---~i~~~~ 161 (729)
.+..+.|+| .++.+.. .+|...+|............+.. .-..+.....+ |.++ ++ .++++.
T Consensus 18 ~i~~~~~~~--~~l~s~~---~dg~i~iw~~~~~~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCS---GDGYLKVWDNKLLDNENPKDKSY-----SHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp CEEEEEECS--SEEEEEE---TTSEEEEEESBCCTTCCGGGGEE-----EEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred CeEEEEecC--CeEEEEc---CCCEEEEEECCCcccccCCCcce-----EEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 456788885 4444443 35777788765441000000000 00011122233 4444 13 556666
Q ss_pred CCCCcEEEEeCCCCCCC------CeecCCCCCC-Cceeeecceec----CCCCE-EEEEEeccCCCCCCcceEEEEEEcC
Q 004816 162 YKDQRLYKHSIDSKDSS------PLPITPDYGE-PLVSYADGIFD----PRFNR-YVTVREDRRQDALNSTTEIVAIALN 229 (729)
Q Consensus 162 ~~~~~l~~~d~~~~~~~------~~~lt~~~~~-~~~~~~~~~~S----PdG~~-l~~~~~~~~~~~~~~~~~l~~~dl~ 229 (729)
..++.|++|++.+ ++ ...+...... ....+....|+ |+|+. |+....+ ..|+++|+.
T Consensus 88 ~~dg~i~iw~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d---------g~i~iwd~~ 156 (397)
T 1sq9_A 88 SFSGDLLFYRITR--EDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK---------GTTYIWKFH 156 (397)
T ss_dssp ETTSCEEEEEEEE--CTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT---------SCEEEEEEE
T ss_pred cCCCCEEEEEccC--CcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC---------CcEEEEeCC
Confidence 6788899999987 54 3444433100 01456788999 99998 6655443 357777877
Q ss_pred C------Cc-eE-----Eeee-------CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEec
Q 004816 230 G------QN-IQ-----VLVS-------GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA 290 (729)
Q Consensus 230 ~------g~-~~-----~lt~-------~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~ 290 (729)
+ ++ .. .+.. .........|+||| .|+... ....|.++|+. +++. ...+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~--------~dg~i~i~d~~-~~~~--~~~~~ 224 (397)
T 1sq9_A 157 PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF--------NNGTVQISELS-TLRP--LYNFE 224 (397)
T ss_dssp SSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC--------TTSEEEEEETT-TTEE--EEEEE
T ss_pred ccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe--------CCCcEEEEECC-CCce--eEEEe
Confidence 6 33 22 3421 34456678999999 666544 23459999998 5654 33444
Q ss_pred C---C---CCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEee
Q 004816 291 G---F---DPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 338 (729)
Q Consensus 291 ~---~---~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~ 338 (729)
. . . ..+..+.|+|||++++......+...|.++|+.+++.....
T Consensus 225 ~~~~h~~~~----~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 225 SQHSMINNS----NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp CCC---CCC----CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred ccccccccC----CccceEEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 4 3 3 55678899999994444433133467888898877654433
No 314
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.90 E-value=3.5e-09 Score=103.94 Aligned_cols=185 Identities=11% Similarity=0.052 Sum_probs=104.5
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
.|.|+++||.+++ ...|..++..|.. |.|+.+|++|.+ . ..+|+.+.++.+.. .+
T Consensus 17 ~~~l~~~hg~~~~--~~~~~~~~~~l~~--~~v~~~d~~g~~---~-------------~~~~~~~~i~~~~~-----~~ 71 (230)
T 1jmk_C 17 EQIIFAFPPVLGY--GLMYQNLSSRLPS--YKLCAFDFIEEE---D-------------RLDRYADLIQKLQP-----EG 71 (230)
T ss_dssp SEEEEEECCTTCC--GGGGHHHHHHCTT--EEEEEECCCCST---T-------------HHHHHHHHHHHHCC-----SS
T ss_pred CCCEEEECCCCCc--hHHHHHHHHhcCC--CeEEEecCCCHH---H-------------HHHHHHHHHHHhCC-----CC
Confidence 3679999997433 3556667777754 999999998632 1 13566666665521 35
Q ss_pred cEEEEEcChHHHHHHHHHh-C---CCcceEEEEeccccChh--HHhhh-cchhhhhhhhh------hcCC--hh------
Q 004816 572 RLCITGGSAGGYTTLAALA-F---RDTFKAGASLYGVADLS--MLRAE-THKFESRYIDN------LVGS--EK------ 630 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~-~---~~~~~a~v~~~~~~d~~--~~~~~-~~~~~~~~~~~------~~~~--~~------ 630 (729)
++.++|||+||.+++.++. . +++++++++..+..... .+... ........... .... ..
T Consensus 72 ~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T 1jmk_C 72 PLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKT 151 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHHHHHHH
T ss_pred CeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhhhhhhhHHHHHHHHHHH
Confidence 7999999999999998886 3 46788888877543210 00000 00000000000 0000 00
Q ss_pred -hhhhcCc-ccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHh-CCCCEEEEEECCCCcc-cCCcccHHHHHHHHHHH
Q 004816 631 -DYYEKSP-INFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKE-NGLPVALVEYEGEQHG-FRKAENIKFTLEQQMVF 706 (729)
Q Consensus 631 -~~~~~sp-~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~-~g~~~~~~~~~~~gH~-~~~~~~~~~~~~~~~~f 706 (729)
.+..+.. .....++++|+++++|++|..++. ... .+.+ ...+++++.+++ +|. +...++.....+.+.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~----~w~~~~~~~~~~~~i~g-~H~~~~~~~~~~~~~~~i~~~ 225 (230)
T 1jmk_C 152 HAFYSYYVNLISTGQVKADIDLLTSGADFDIPE-WLA----SWEEATTGAYRMKRGFG-THAEMLQGETLDRNAGILLEF 225 (230)
T ss_dssp HHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCT-TEE----CSGGGBSSCEEEEECSS-CGGGTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccccccccccEEEEEeCCCCCCcc-ccc----hHHHhcCCCeEEEEecC-ChHHHcCcHhHHHHHHHHHHH
Confidence 0111100 023467889999999999998862 221 2222 223679999997 882 22334444555555555
Q ss_pred H
Q 004816 707 F 707 (729)
Q Consensus 707 l 707 (729)
+
T Consensus 226 l 226 (230)
T 1jmk_C 226 L 226 (230)
T ss_dssp H
T ss_pred H
Confidence 4
No 315
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.90 E-value=2.6e-07 Score=95.94 Aligned_cols=236 Identities=11% Similarity=-0.028 Sum_probs=141.0
Q ss_pred eEEEECCEEEEEECCCCcEEEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEE
Q 004816 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (729)
Q Consensus 149 ~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~d 227 (729)
...++++++++....++.|.++|+.+ ++. ..+... .....++++||| +| |+.... ...|+++|
T Consensus 48 ~i~~~~~~lyv~~~~~~~v~viD~~t--~~~~~~i~~~-----~~p~~i~~~~~g-~l-yv~~~~-------~~~v~~iD 111 (328)
T 3dsm_A 48 SMVIRDGIGWIVVNNSHVIFAIDINT--FKEVGRITGF-----TSPRYIHFLSDE-KA-YVTQIW-------DYRIFIIN 111 (328)
T ss_dssp EEEEETTEEEEEEGGGTEEEEEETTT--CCEEEEEECC-----SSEEEEEEEETT-EE-EEEEBS-------CSEEEEEE
T ss_pred EEEEECCEEEEEEcCCCEEEEEECcc--cEEEEEcCCC-----CCCcEEEEeCCC-eE-EEEECC-------CCeEEEEE
Confidence 35567888888887778999999998 554 455432 223667789998 55 444422 25799999
Q ss_pred cCCCceEE-eeeCCC-----eeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCcccccc
Q 004816 228 LNGQNIQV-LVSGSD-----FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 301 (729)
Q Consensus 228 l~~g~~~~-lt~~~~-----~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 301 (729)
+++++... +.-+.. ...+.++ ++++|+...+. ....|.++|++ +++... .+... ....
T Consensus 112 ~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~------~~~~v~viD~~-t~~~~~--~i~~g-----~~p~ 175 (328)
T 3dsm_A 112 PKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWS------YQNRILKIDTE-TDKVVD--ELTIG-----IQPT 175 (328)
T ss_dssp TTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECT------TCCEEEEEETT-TTEEEE--EEECS-----SCBC
T ss_pred CCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCC------CCCEEEEEECC-CCeEEE--EEEcC-----CCcc
Confidence 99987654 332220 3344566 67778666531 13469999998 676532 22211 2346
Q ss_pred CceeCCCCcEEEEEecCCC-------ceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEE
Q 004816 302 EPKWSSKGELFFVTDRKNG-------FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ 374 (729)
Q Consensus 302 ~~~wspDG~l~~~~~~~~g-------~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~ 374 (729)
.+.++|||++++....... ...|+++|+++++.......... . ....+.+.+ +++.+|+...
T Consensus 176 ~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g--~-----~p~~la~~~---d~~~lyv~~~- 244 (328)
T 3dsm_A 176 SLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG--D-----WPSEVQLNG---TRDTLYWINN- 244 (328)
T ss_dssp CCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT--C-----CCEEEEECT---TSCEEEEESS-
T ss_pred ceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC--C-----CceeEEEec---CCCEEEEEcc-
Confidence 7889999997666543101 25799999998876543321100 0 112344543 6777776532
Q ss_pred CCeEEEEEEECCCCceEe---eccCCcceEEe-ee-eCCEEEEEEeCC-CCCceEEEEEcCCCc
Q 004816 375 NGRSYLGILDDFGHSLSL---LDIPFTDIDNI-TL-GNDCLFVEGASG-VEPSSVAKVTLDDHK 432 (729)
Q Consensus 375 ~g~~~ly~~d~~~g~~~~---lt~~~~~v~~~-~~-~~~~~~~~~~~~-~~~~~ly~~d~~~~~ 432 (729)
.|+++|.+++++.. ++........+ .+ +++.+++..... .....+++++.+ |+
T Consensus 245 ----~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 245 ----DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp ----SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred ----EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 79999998887532 11112234445 33 355555543111 234568999987 54
No 316
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.90 E-value=1.6e-07 Score=97.64 Aligned_cols=274 Identities=9% Similarity=-0.038 Sum_probs=152.4
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCC----CcccCCCCCcccccccccCCce--EEEECCEEEEEE
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDE----PSDITPKEYAVRTTAQEYGGGA--FRIFGDTVIFSN 161 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~----~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~ 161 (729)
..+.++.|+| ++.++... .++...+|..... + .+.+.. +.....+ |.+++...+++.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~----~d~~v~iw~~~~~---~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~l~~~ 75 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITS----WDGSLTVYKFDIQ---AKNVDLLQSLR---------YKHPLLCCNFIDNTDLQIYVG 75 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEE----TTSEEEEEEEETT---TTEEEEEEEEE---------CSSCEEEEEEEESSSEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEc----CCCeEEEEEeCCC---Cccccceeeee---------cCCceEEEEECCCCCcEEEEE
Confidence 3567889999 66555433 3577777776543 2 111111 1112233 444444155556
Q ss_pred CCCCcEEEEeC-CCCCCCCeecCC--CCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCC--------
Q 004816 162 YKDQRLYKHSI-DSKDSSPLPITP--DYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-------- 230 (729)
Q Consensus 162 ~~~~~l~~~d~-~~~~~~~~~lt~--~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~-------- 230 (729)
..++.|++|++ .+ +....+.. . ...+....|+| ++.|+....+ ..|.++|+.+
T Consensus 76 ~~dg~i~~wd~~~~--~~~~~~~~~~~----~~~v~~l~~~~-~~~l~s~~~d---------~~i~iwd~~~~~~~~~~~ 139 (342)
T 1yfq_A 76 TVQGEILKVDLIGS--PSFQALTNNEA----NLGICRICKYG-DDKLIAASWD---------GLIEVIDPRNYGDGVIAV 139 (342)
T ss_dssp ETTSCEEEECSSSS--SSEEECBSCCC----CSCEEEEEEET-TTEEEEEETT---------SEEEEECHHHHTTBCEEE
T ss_pred cCCCeEEEEEeccC--CceEeccccCC----CCceEEEEeCC-CCEEEEEcCC---------CeEEEEcccccccccccc
Confidence 67889999999 87 76666665 4 34567889999 8877666543 4688888875
Q ss_pred -CceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCC-CCeeeeEEecCCCCCccccccCceeCC-
Q 004816 231 -QNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN-GDVYKRVCVAGFDPTIVESPTEPKWSS- 307 (729)
Q Consensus 231 -g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~-g~~~~~~~~~~~~~~~~~~~~~~~wsp- 307 (729)
++...............|+||+ |+... ....|.++|+. + +............ ..+..+.|+|
T Consensus 140 ~~~~~~~~~~~~~v~~~~~~~~~--l~~~~--------~d~~i~i~d~~-~~~~~~~~~~~~~~~----~~i~~i~~~~~ 204 (342)
T 1yfq_A 140 KNLNSNNTKVKNKIFTMDTNSSR--LIVGM--------NNSQVQWFRLP-LCEDDNGTIEESGLK----YQIRDVALLPK 204 (342)
T ss_dssp EESCSSSSSSCCCEEEEEECSSE--EEEEE--------STTEEEEEESS-CCTTCCCEEEECSCS----SCEEEEEECSG
T ss_pred cCCeeeEEeeCCceEEEEecCCc--EEEEe--------CCCeEEEEECC-ccccccceeeecCCC----CceeEEEECCC
Confidence 4432222244556778999997 55444 23459999998 5 4422223333333 4567789999
Q ss_pred CCcEEEEEecCCCceEEEEEEcC-----CCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEE
Q 004816 308 KGELFFVTDRKNGFWNLHKWIES-----NNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 382 (729)
Q Consensus 308 DG~l~~~~~~~~g~~~l~~~d~~-----~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~ 382 (729)
||+++++... .|...||.++.. ......+...........-......+.|.+ +++ ++++...+|...+
T Consensus 205 ~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~-~l~~~~~dg~i~v-- 277 (342)
T 1yfq_A 205 EQEGYACSSI-DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP---RHK-FLYTAGSDGIISC-- 277 (342)
T ss_dssp GGCEEEEEET-TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT---TTC-CEEEEETTSCEEE--
T ss_pred CCCEEEEEec-CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC---CCC-EEEEecCCceEEE--
Confidence 9985555555 566666666554 122223322111000000000112334442 444 4455556675444
Q ss_pred EECCCCce-EeeccC-CcceEEeeeeCCEEEEEEeCC
Q 004816 383 LDDFGHSL-SLLDIP-FTDIDNITLGNDCLFVEGASG 417 (729)
Q Consensus 383 ~d~~~g~~-~~lt~~-~~~v~~~~~~~~~~~~~~~~~ 417 (729)
+|+.+++. ..+... ...+..+. .++.+++.++..
T Consensus 278 wd~~~~~~~~~~~~~h~~~v~~~~-~~~~~l~s~s~D 313 (342)
T 1yfq_A 278 WNLQTRKKIKNFAKFNEDSVVKIA-CSDNILCLATSD 313 (342)
T ss_dssp EETTTTEEEEECCCCSSSEEEEEE-ECSSEEEEEEEC
T ss_pred EcCccHhHhhhhhcccCCCceEec-CCCCeEEEEecC
Confidence 57776664 344444 55566666 555555555543
No 317
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.89 E-value=2.4e-07 Score=97.43 Aligned_cols=233 Identities=11% Similarity=0.022 Sum_probs=134.2
Q ss_pred ceEEEECC-EEEEEECCCCcEEEEeCCCCCC---CCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEE
Q 004816 148 GAFRIFGD-TVIFSNYKDQRLYKHSIDSKDS---SPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (729)
Q Consensus 148 ~~~~~~~~-~i~~~~~~~~~l~~~d~~~~~~---~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l 223 (729)
.+..++++ .+++....++.|++|++.+ + ....+... ...+....|+|||+.|+....+ ..|
T Consensus 12 ~~~~~s~~~~~l~~~~~d~~v~i~~~~~--~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~~~d---------g~i 76 (372)
T 1k8k_C 12 SCHAWNKDRTQIAICPNNHEVHIYEKSG--NKWVQVHELKEH----NGQVTGVDWAPDSNRIVTCGTD---------RNA 76 (372)
T ss_dssp CEEEECTTSSEEEEECSSSEEEEEEEET--TEEEEEEEEECC----SSCEEEEEEETTTTEEEEEETT---------SCE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCC--CcEEeeeeecCC----CCcccEEEEeCCCCEEEEEcCC---------CeE
Confidence 33444433 3455555678899999987 5 33444433 3456788999999988766543 358
Q ss_pred EEEEcCCCceEEe---eeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe-ee-eEEecCCCCCccc
Q 004816 224 VAIALNGQNIQVL---VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YK-RVCVAGFDPTIVE 298 (729)
Q Consensus 224 ~~~dl~~g~~~~l---t~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~-~~-~~~~~~~~~~~~~ 298 (729)
.++++.+++.... ...........|+|||++|+.... ...|.++|+. .+.. .. ........ .
T Consensus 77 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------d~~v~i~d~~-~~~~~~~~~~~~~~~~----~ 143 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSG--------SRVISICYFE-QENDWWVCKHIKKPIR----S 143 (372)
T ss_dssp EEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEET--------TSSEEEEEEE-TTTTEEEEEEECTTCC----S
T ss_pred EEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeC--------CCEEEEEEec-CCCcceeeeeeecccC----C
Confidence 8888887764333 233445677899999999887762 2338888887 4441 11 12223333 5
Q ss_pred cccCceeCCCCcEEEEEecCCCceEEEEEEcC------------------CCeEEE-eeccCccccCCcccccCcceeee
Q 004816 299 SPTEPKWSSKGELFFVTDRKNGFWNLHKWIES------------------NNEVLA-IYSLDAEFSRPLWVFGINSYEII 359 (729)
Q Consensus 299 ~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~------------------~g~~~~-l~~~~~~~~~~~w~~~~~~~~~l 359 (729)
.+..+.|+|||++++.... .+. |.++|.. .++... +......+. .+.|.
T Consensus 144 ~i~~~~~~~~~~~l~~~~~-dg~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~ 211 (372)
T 1k8k_C 144 TVLSLDWHPNSVLLAAGSC-DFK--CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVH---------GVCFS 211 (372)
T ss_dssp CEEEEEECTTSSEEEEEET-TSC--EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEE---------EEEEC
T ss_pred CeeEEEEcCCCCEEEEEcC-CCC--EEEEEcccccccccccccccccccchhhheEecCCCCCeEE---------EEEEC
Confidence 5678899999995555444 454 4445532 333322 222222222 23443
Q ss_pred eecCCCCEEEEEEEECCeEEEEEEECCCCc-eEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCC
Q 004816 360 QSHGEKNLIACSYRQNGRSYLGILDDFGHS-LSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDD 430 (729)
Q Consensus 360 ~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~-~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~ 430 (729)
+ +++ ++++...+|...+| |+.+++ +..+......+..+ ..+++.+++.+ .+ ..++.+++..
T Consensus 212 ~---~~~-~l~~~~~d~~i~i~--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d--~~i~i~~~~~ 274 (372)
T 1k8k_C 212 A---NGS-RVAWVSHDSTVCLA--DADKKMAVATLASETLPLLAVTFITESSLVAAG--HD--CFPVLFTYDS 274 (372)
T ss_dssp S---SSS-EEEEEETTTEEEEE--EGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE--TT--SSCEEEEEET
T ss_pred C---CCC-EEEEEeCCCEEEEE--ECCCCceeEEEccCCCCeEEEEEecCCCEEEEE--eC--CeEEEEEccC
Confidence 2 454 45555567765555 665554 44555555567776 55566665544 33 2444555555
No 318
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.89 E-value=5.5e-07 Score=92.23 Aligned_cols=254 Identities=12% Similarity=0.064 Sum_probs=144.1
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcE
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 167 (729)
..+.++.|+| ++.++- .. .+|...+|..... ...+.+......+. ...|.++++ .+++...++.|
T Consensus 14 ~~V~~~~fsp~~~~l~s-~~---~dg~v~lWd~~~~--~~~~~~~~~~~~v~-------~~~~~~~~~-~l~s~s~d~~i 79 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLT-TL---YSGRVELWNYETQ--VEVRSIQVTETPVR-------AGKFIARKN-WIIVGSDDFRI 79 (304)
T ss_dssp SCEEEEEECSSSSEEEE-EE---TTSEEEEEETTTT--EEEEEEECCSSCEE-------EEEEEGGGT-EEEEEETTSEE
T ss_pred CceEEEEECCCCCEEEE-Ec---CCCcEEEEECCCC--ceeEEeeccCCcEE-------EEEEeCCCC-EEEEECCCCEE
Confidence 4567899999 655543 32 4677788876433 11111211110110 122333333 45555678899
Q ss_pred EEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc-eEEe-eeCCCeee
Q 004816 168 YKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN-IQVL-VSGSDFYA 244 (729)
Q Consensus 168 ~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~-~~~l-t~~~~~~~ 244 (729)
.+||+.+ ++. ..+... ...+...+|+|+++.|+....+ ..|.++|+.++. ..+. ........
T Consensus 80 ~vwd~~~--~~~~~~~~~h----~~~v~~~~~~~~~~~l~sgs~D---------~~v~lWd~~~~~~~~~~~~~h~~~v~ 144 (304)
T 2ynn_A 80 RVFNYNT--GEKVVDFEAH----PDYIRSIAVHPTKPYVLSGSDD---------LTVKLWNWENNWALEQTFEGHEHFVM 144 (304)
T ss_dssp EEEETTT--CCEEEEEECC----SSCEEEEEECSSSSEEEEEETT---------SCEEEEEGGGTTEEEEEECCCCSCEE
T ss_pred EEEECCC--CcEEEEEeCC----CCcEEEEEEcCCCCEEEEECCC---------CeEEEEECCCCcchhhhhcccCCcEE
Confidence 9999987 543 344433 3457788999999987655543 358888988763 3333 33445567
Q ss_pred eeeeCC-CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCC--CCcEEEEEecCCCc
Q 004816 245 FPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS--KGELFFVTDRKNGF 321 (729)
Q Consensus 245 ~~~~SP-DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wsp--DG~l~~~~~~~~g~ 321 (729)
..+|+| |++.|+-.+. ...|.++|+. .+.. ...+..+.. ..+....|+| |+++++.... .+
T Consensus 145 ~v~~~p~~~~~l~sgs~--------D~~v~iwd~~-~~~~-~~~~~~~~~----~~v~~~~~~~~~~~~~l~s~s~-D~- 208 (304)
T 2ynn_A 145 CVAFNPKDPSTFASGCL--------DRTVKVWSLG-QSTP-NFTLTTGQE----RGVNYVDYYPLPDKPYMITASD-DL- 208 (304)
T ss_dssp EEEECTTCTTEEEEEET--------TSEEEEEETT-CSSC-SEEEECCCT----TCEEEEEECCSTTCCEEEEEET-TS-
T ss_pred EEEECCCCCCEEEEEeC--------CCeEEEEECC-CCCc-cceeccCCc----CcEEEEEEEEcCCCCEEEEEcC-CC-
Confidence 789999 6777765552 3458899987 4442 123333333 3344566765 6665555544 34
Q ss_pred eEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce-EeeccCCcc
Q 004816 322 WNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-SLLDIPFTD 399 (729)
Q Consensus 322 ~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~-~~lt~~~~~ 399 (729)
.|.++|+.+++..... .....+.. +.|.| ++. ++++...+|...|| |..+++. +.+..+...
T Consensus 209 -~i~iWd~~~~~~~~~~~~h~~~v~~---------~~~~p---~~~-~l~s~s~Dg~i~iW--d~~~~~~~~~~~~~~~~ 272 (304)
T 2ynn_A 209 -TIKIWDYQTKSCVATLEGHMSNVSF---------AVFHP---TLP-IIISGSEDGTLKIW--NSSTYKVEKTLNVGLER 272 (304)
T ss_dssp -EEEEEETTTTEEEEEEECCSSCEEE---------EEECS---SSS-EEEEEETTSCEEEE--ETTTCCEEEEECCSSSS
T ss_pred -eEEEEeCCCCccceeeCCCCCCEEE---------EEECC---CCC-EEEEEcCCCeEEEE--ECCCCceeeeccCCCcc
Confidence 4666788877654333 22222222 23332 444 56677778877776 6666654 445444445
Q ss_pred eEEe
Q 004816 400 IDNI 403 (729)
Q Consensus 400 v~~~ 403 (729)
+..+
T Consensus 273 ~~~~ 276 (304)
T 2ynn_A 273 SWCI 276 (304)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 319
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.89 E-value=4.6e-07 Score=94.45 Aligned_cols=270 Identities=10% Similarity=0.030 Sum_probs=151.6
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcE
Q 004816 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRL 167 (729)
Q Consensus 89 ~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l 167 (729)
..+..+.|+|++.+..+.. .++...+|..... +....++. +........++++ ..+++...++.+
T Consensus 56 ~~v~~~~~s~d~~~l~s~s---~Dg~v~iWd~~~~---~~~~~~~~--------~~~~v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSAS---QDGKLIIWDSYTT---NKVHAIPL--------RSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp SCEEEEEECTTSSEEEEEE---TTTEEEEEETTTC---CEEEEEEC--------SSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred CceEEEEECCCCCEEEEEe---CCCcEEEEECCCC---CcceEeec--------CCccEEEEEECCCCCEEEEEeCCCeE
Confidence 4567889999444444443 4577777865432 22111111 1111222333322 345555567889
Q ss_pred EEEeCCCCCCCCe---ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEe-eeCCCee
Q 004816 168 YKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVL-VSGSDFY 243 (729)
Q Consensus 168 ~~~d~~~~~~~~~---~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~l-t~~~~~~ 243 (729)
.+|++.++.+..+ .+... ...+....|+|+++ ++....+ ..|.++|+.+++.... .......
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~-l~s~s~d---------~~i~~wd~~~~~~~~~~~~h~~~v 187 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGH----TGYLSCCRFLDDNQ-IVTSSGD---------TTCALWDIETGQQTTTFTGHTGDV 187 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECC----SSCEEEEEEEETTE-EEEEETT---------SCEEEEETTTTEEEEEECCCSSCE
T ss_pred EEEECccCCCcceeEEEecCC----CccEEEEEECCCCc-EEEEECC---------CcEEEEECCCCcEEEEEcCCCCce
Confidence 9999876101111 22222 23456677899886 4444332 4588899998876543 3344566
Q ss_pred eeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceE
Q 004816 244 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWN 323 (729)
Q Consensus 244 ~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~ 323 (729)
...+|+|||+.|+..+. ...|.++|+. ++.. ...+.+.. ..+..++|+|||+++++... .+.
T Consensus 188 ~~~~~~~~~~~l~sg~~--------d~~v~~wd~~-~~~~--~~~~~~h~----~~v~~v~~~p~~~~l~s~s~-d~~-- 249 (340)
T 1got_B 188 MSLSLAPDTRLFVSGAC--------DASAKLWDVR-EGMC--RQTFTGHE----SDINAICFFPNGNAFATGSD-DAT-- 249 (340)
T ss_dssp EEEEECTTSSEEEEEET--------TSCEEEEETT-TCSE--EEEECCCS----SCEEEEEECTTSSEEEEEET-TSC--
T ss_pred EEEEECCCCCEEEEEeC--------CCcEEEEECC-CCee--EEEEcCCc----CCEEEEEEcCCCCEEEEEcC-CCc--
Confidence 78899999998775552 2348899988 6654 44555554 56678899999995555444 343
Q ss_pred EEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCc-eEeeccCCcceEE
Q 004816 324 LHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS-LSLLDIPFTDIDN 402 (729)
Q Consensus 324 l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~-~~~lt~~~~~v~~ 402 (729)
|.++|+.+++.......... ......+.|.+ ++ .++++...+|...|| |..+++ ...+......|..
T Consensus 250 v~iwd~~~~~~~~~~~~~~~------~~~v~~~~~s~---~g-~~l~~g~~d~~i~vw--d~~~~~~~~~~~~h~~~v~~ 317 (340)
T 1got_B 250 CRLFDLRADQELMTYSHDNI------ICGITSVSFSK---SG-RLLLAGYDDFNCNVW--DALKADRAGVLAGHDNRVSC 317 (340)
T ss_dssp EEEEETTTTEEEEEECCTTC------CSCEEEEEECT---TS-SEEEEEETTSEEEEE--ETTTCCEEEEEECCSSCEEE
T ss_pred EEEEECCCCcEEEEEccCCc------ccceEEEEECC---CC-CEEEEECCCCeEEEE--EcccCcEeeEeecCCCcEEE
Confidence 55668777654433321110 01122344542 44 455666667765555 655554 3455555566777
Q ss_pred e-eeeCCEEEEEEeC
Q 004816 403 I-TLGNDCLFVEGAS 416 (729)
Q Consensus 403 ~-~~~~~~~~~~~~~ 416 (729)
+ ..+++.+++.++.
T Consensus 318 ~~~s~dg~~l~s~s~ 332 (340)
T 1got_B 318 LGVTDDGMAVATGSW 332 (340)
T ss_dssp EEECTTSSCEEEEET
T ss_pred EEEcCCCCEEEEEcC
Confidence 7 4455555555553
No 320
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.89 E-value=1.5e-07 Score=110.61 Aligned_cols=254 Identities=11% Similarity=0.072 Sum_probs=149.7
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcE
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 167 (729)
..+.++.|+| +..++... .+|...+|....+ .....+......+. ...|++++..++.. ..++.|
T Consensus 14 ~~v~~i~~sp~~~~la~~~----~~g~v~iwd~~~~--~~~~~~~~~~~~v~-------~~~~s~~~~~l~~~-~~dg~i 79 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTL----YSGRVEIWNYETQ--VEVRSIQVTETPVR-------AGKFIARKNWIIVG-SDDFRI 79 (814)
T ss_dssp SCEEEEEECSSSSEEEEEE----TTSEEEEEETTTT--EEEEEEECCSSCEE-------EEEEEGGGTEEEEE-ETTSEE
T ss_pred CceEEEEECCCCCEEEEEe----CCCEEEEEECCCC--ceEEEEecCCCcEE-------EEEEeCCCCEEEEE-eCCCeE
Confidence 4678899999 77776654 3577777765433 11222221110111 12344445455544 457899
Q ss_pred EEEeCCCCCCC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCC-ceE-EeeeCCCeee
Q 004816 168 YKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ-NIQ-VLVSGSDFYA 244 (729)
Q Consensus 168 ~~~d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g-~~~-~lt~~~~~~~ 244 (729)
.+|++.+ ++ ...+... ...+...+|+|||++|+....+ ..|.++++.++ ... .+........
T Consensus 80 ~vw~~~~--~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~d---------g~i~vw~~~~~~~~~~~~~~~~~~v~ 144 (814)
T 3mkq_A 80 RVFNYNT--GEKVVDFEAH----PDYIRSIAVHPTKPYVLSGSDD---------LTVKLWNWENNWALEQTFEGHEHFVM 144 (814)
T ss_dssp EEEETTT--CCEEEEEECC----SSCEEEEEECSSSSEEEEEETT---------SEEEEEEGGGTSEEEEEEECCSSCEE
T ss_pred EEEECCC--CcEEEEEecC----CCCEEEEEEeCCCCEEEEEcCC---------CEEEEEECCCCceEEEEEcCCCCcEE
Confidence 9999987 44 3444433 3456788999999988766543 46888898876 333 3344445677
Q ss_pred eeeeCC-CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCC--CCcEEEEEecCCCc
Q 004816 245 FPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS--KGELFFVTDRKNGF 321 (729)
Q Consensus 245 ~~~~SP-DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wsp--DG~l~~~~~~~~g~ 321 (729)
..+|+| ||+.|+... ....|.++|+. ++... ..+..... ..+..+.|+| ||.+++.... .+
T Consensus 145 ~~~~~p~~~~~l~~~~--------~dg~v~vwd~~-~~~~~-~~~~~~~~----~~v~~~~~~~~~~~~~l~~~~~-dg- 208 (814)
T 3mkq_A 145 CVAFNPKDPSTFASGC--------LDRTVKVWSLG-QSTPN-FTLTTGQE----RGVNYVDYYPLPDKPYMITASD-DL- 208 (814)
T ss_dssp EEEEETTEEEEEEEEE--------TTSEEEEEETT-CSSCS-EEEECCCT----TCCCEEEECCSTTCCEEEEECT-TS-
T ss_pred EEEEEcCCCCEEEEEe--------CCCeEEEEECC-CCcce-eEEecCCC----CCEEEEEEEECCCCCEEEEEeC-CC-
Confidence 889999 888887666 23459999987 55432 22333332 4556788998 8885555444 34
Q ss_pred eEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce-EeeccCCcc
Q 004816 322 WNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-SLLDIPFTD 399 (729)
Q Consensus 322 ~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~-~~lt~~~~~ 399 (729)
.|.++|..+++..... .....+....|++ ++. ++++...+|...+| ++.+++. ..+..+...
T Consensus 209 -~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~------------~~~-~l~~~~~dg~v~vw--d~~~~~~~~~~~~~~~~ 272 (814)
T 3mkq_A 209 -TIKIWDYQTKSCVATLEGHMSNVSFAVFHP------------TLP-IIISGSEDGTLKIW--NSSTYKVEKTLNVGLER 272 (814)
T ss_dssp -EEEEEETTTTEEEEEEECCSSCEEEEEECS------------SSS-EEEEEETTSCEEEE--ETTTCSEEEEECCSSSS
T ss_pred -EEEEEECCCCcEEEEEcCCCCCEEEEEEcC------------CCC-EEEEEeCCCeEEEE--ECCCCcEEEEeecCCCc
Confidence 5777788777654433 2232333334443 444 55555566765555 6666554 344444445
Q ss_pred eEEe
Q 004816 400 IDNI 403 (729)
Q Consensus 400 v~~~ 403 (729)
+..+
T Consensus 273 v~~~ 276 (814)
T 3mkq_A 273 SWCI 276 (814)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5555
No 321
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.89 E-value=4.7e-08 Score=103.26 Aligned_cols=197 Identities=8% Similarity=-0.090 Sum_probs=121.6
Q ss_pred eEEEECCEEEEEE-CCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEE
Q 004816 149 AFRIFGDTVIFSN-YKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (729)
Q Consensus 149 ~~~~~~~~i~~~~-~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~d 227 (729)
+|++++..++... ..++.|.+||+.+ ++....... ...+.+.+|||||++|+...+ ..+.+++
T Consensus 140 ~fSpDg~~la~as~~~d~~i~iwd~~~--~~~~~~~~~----~~~V~~v~fspdg~~l~s~s~----------~~~~~~~ 203 (365)
T 4h5i_A 140 YISREGTVAAIASSKVPAIMRIIDPSD--LTEKFEIET----RGEVKDLHFSTDGKVVAYITG----------SSLEVIS 203 (365)
T ss_dssp EECTTSSCEEEEESCSSCEEEEEETTT--TEEEEEEEC----SSCCCEEEECTTSSEEEEECS----------SCEEEEE
T ss_pred EEcCCCCEEEEEECCCCCEEEEeECCC--CcEEEEeCC----CCceEEEEEccCCceEEeccc----------eeEEEEE
Confidence 4555555665544 3567899999987 543332222 234688899999998877653 2367778
Q ss_pred cCCCceEE-eee--CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCee--eeEEecCCCCCccccccC
Q 004816 228 LNGQNIQV-LVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVY--KRVCVAGFDPTIVESPTE 302 (729)
Q Consensus 228 l~~g~~~~-lt~--~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~--~~~~~~~~~~~~~~~~~~ 302 (729)
..+++... .+. ........+|||||+.|+..+.+.. ....++.+++. .+... ....+.+.. ..+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~----~~~~i~~~~~~-~~~~~~~~~~~~~~~~----~~V~~ 274 (365)
T 4h5i_A 204 TVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKG----KGIVLTKISIK-SGNTSVLRSKQVTNRF----KGITS 274 (365)
T ss_dssp TTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSS----CCEEEEEEEEE-TTEEEEEEEEEEESSC----SCEEE
T ss_pred eccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCc----ceeEEeecccc-cceecceeeeeecCCC----CCeEe
Confidence 77766433 222 2334567899999999988775442 23457788877 44322 122344444 45677
Q ss_pred ceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEE-eec-cCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEE
Q 004816 303 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLA-IYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 380 (729)
Q Consensus 303 ~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~-l~~-~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~l 380 (729)
++|||||+++..... .+ .|.++|..+++... +.. ....+. .+.|.| |++ ++++...|+..+|
T Consensus 275 ~~~Spdg~~lasgs~-D~--~V~iwd~~~~~~~~~~~~gH~~~V~---------~v~fSp---dg~-~laS~S~D~tvrv 338 (365)
T 4h5i_A 275 MDVDMKGELAVLASN-DN--SIALVKLKDLSMSKIFKQAHSFAIT---------EVTISP---DST-YVASVSAANTIHI 338 (365)
T ss_dssp EEECTTSCEEEEEET-TS--CEEEEETTTTEEEEEETTSSSSCEE---------EEEECT---TSC-EEEEEETTSEEEE
T ss_pred EEECCCCCceEEEcC-CC--EEEEEECCCCcEEEEecCcccCCEE---------EEEECC---CCC-EEEEEeCCCeEEE
Confidence 899999995444443 23 46667888887543 322 232333 344543 554 5667778999999
Q ss_pred EEEECC
Q 004816 381 GILDDF 386 (729)
Q Consensus 381 y~~d~~ 386 (729)
|.+..+
T Consensus 339 w~ip~~ 344 (365)
T 4h5i_A 339 IKLPLN 344 (365)
T ss_dssp EECCTT
T ss_pred EEcCCC
Confidence 876433
No 322
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.88 E-value=2.3e-08 Score=107.13 Aligned_cols=247 Identities=10% Similarity=0.024 Sum_probs=139.8
Q ss_pred EEEECCEEEEEE----------CCCCcEEEEeCCCCCCCCe-ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCC
Q 004816 150 FRIFGDTVIFSN----------YKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALN 218 (729)
Q Consensus 150 ~~~~~~~i~~~~----------~~~~~l~~~d~~~~~~~~~-~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~ 218 (729)
|++++..++++. ..++.|.+|++.+ +... .+.... ....+..++|+|||+.|+....+
T Consensus 20 ~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~--~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d------- 88 (416)
T 2pm9_A 20 WSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLA--ADSEKPIASLQ--VDSKFNDLDWSHNNKIIAGALDN------- 88 (416)
T ss_dssp BCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSS--GGGCSCSCCCC--CSSCEEEEEECSSSSCEEEEESS-------
T ss_pred eCCCCCCEEEEEecCcccccccCCCCeEEEEEccC--CCCCcEEEEEe--cCCceEEEEECCCCCeEEEEccC-------
Confidence 444444456665 5677899999986 4321 221110 13457888999999988776553
Q ss_pred cceEEEEEEcCC----C-ceEEeeeCCCeeeeeeeCCC-CCeEEEEEecCCCCCCCCcEEEEEEecCCCC------ee-e
Q 004816 219 STTEIVAIALNG----Q-NIQVLVSGSDFYAFPRMDPR-GERMAWIEWHHPNMPWDKAELWVGYISENGD------VY-K 285 (729)
Q Consensus 219 ~~~~l~~~dl~~----g-~~~~lt~~~~~~~~~~~SPD-G~~la~~~~~~~~~~~~~~~l~~~d~~~~g~------~~-~ 285 (729)
..|.++++.+ . ....+..........+|+|| ++.|+..+ . ...|+++|+. +++ .. .
T Consensus 89 --g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~-------dg~v~iwd~~-~~~~~~~~~~~~~ 157 (416)
T 2pm9_A 89 --GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGG-N-------NGEIFIWDMN-KCTESPSNYTPLT 157 (416)
T ss_dssp --SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEEC-S-------SSCEEBCBTT-TTSSCTTTCCCBC
T ss_pred --CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEc-C-------CCeEEEEECC-CCccccccccccc
Confidence 3588888876 2 23444445556778899999 67665444 2 2348899988 443 10 1
Q ss_pred eEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCC
Q 004816 286 RVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGE 364 (729)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~ 364 (729)
........ ..+..+.|+||+. +++.... .+ .|.++|+.+++.............. ......+.|.+ +
T Consensus 158 ~~~~~~~~----~~v~~~~~~~~~~~~l~~~~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~---~ 225 (416)
T 2pm9_A 158 PGQSMSSV----DEVISLAWNQSLAHVFASAGS-SN--FASIWDLKAKKEVIHLSYTSPNSGI--KQQLSVVEWHP---K 225 (416)
T ss_dssp CCCSCCSS----CCCCEEEECSSCTTEEEEESS-SS--CEEEEETTTTEEEEEECCCCCSSCC--CCCEEEEEECS---S
T ss_pred cccccCCC----CCeeEEEeCCCCCcEEEEEcC-CC--CEEEEECCCCCcceEEecccccccc--CCceEEEEECC---C
Confidence 11112222 4567789999954 6666554 34 4667788887655444221100000 00112334443 5
Q ss_pred CCEEEEEEEECC-eEEEEEEECCCC-c-eEeec-cCCcceEEe-eee-CCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 365 KNLIACSYRQNG-RSYLGILDDFGH-S-LSLLD-IPFTDIDNI-TLG-NDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 365 ~~~l~~~s~~~g-~~~ly~~d~~~g-~-~~~lt-~~~~~v~~~-~~~-~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+..++++...++ ...|.++|+.++ . .+.+. .....+..+ ..+ ++.+++..+.. ..+.++|+.+++.
T Consensus 226 ~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d---g~v~~wd~~~~~~ 297 (416)
T 2pm9_A 226 NSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD---NTVLLWNPESAEQ 297 (416)
T ss_dssp CTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS---SEEEEECSSSCCE
T ss_pred CCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC---CCEEEeeCCCCcc
Confidence 545566665555 224555577664 2 33444 345567777 333 56666666543 4688888887753
No 323
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.88 E-value=1.1e-07 Score=111.73 Aligned_cols=232 Identities=9% Similarity=0.004 Sum_probs=142.6
Q ss_pred CCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce
Q 004816 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (729)
Q Consensus 154 ~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~ 233 (729)
+..++. ...++.|.+|++.++ .....+... ...+..++|||||++|+....+ ..|.++++.+++.
T Consensus 25 ~~~la~-~~~~g~v~iwd~~~~-~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~d---------g~i~vw~~~~~~~ 89 (814)
T 3mkq_A 25 EPWVLT-TLYSGRVEIWNYETQ-VEVRSIQVT----ETPVRAGKFIARKNWIIVGSDD---------FRIRVFNYNTGEK 89 (814)
T ss_dssp SSEEEE-EETTSEEEEEETTTT-EEEEEEECC----SSCEEEEEEEGGGTEEEEEETT---------SEEEEEETTTCCE
T ss_pred CCEEEE-EeCCCEEEEEECCCC-ceEEEEecC----CCcEEEEEEeCCCCEEEEEeCC---------CeEEEEECCCCcE
Confidence 434444 446788999998872 234445543 3457888999999998877553 4699999998876
Q ss_pred E-EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCC-CCcE
Q 004816 234 Q-VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS-KGEL 311 (729)
Q Consensus 234 ~-~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wsp-DG~l 311 (729)
. .+....+.....+|||||++|+..+ ....|.++|+. ++.. ....+.+.. ..+..+.|+| ||++
T Consensus 90 ~~~~~~~~~~v~~~~~s~~~~~l~~~~--------~dg~i~vw~~~-~~~~-~~~~~~~~~----~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 90 VVDFEAHPDYIRSIAVHPTKPYVLSGS--------DDLTVKLWNWE-NNWA-LEQTFEGHE----HFVMCVAFNPKDPST 155 (814)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEE--------TTSEEEEEEGG-GTSE-EEEEEECCS----SCEEEEEEETTEEEE
T ss_pred EEEEecCCCCEEEEEEeCCCCEEEEEc--------CCCEEEEEECC-CCce-EEEEEcCCC----CcEEEEEEEcCCCCE
Confidence 4 4444556677899999999988665 23458999988 5532 234445554 5667889999 7775
Q ss_pred EEEEecCCCceEEEEEEcCCCeEEEee-c-cCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCc
Q 004816 312 FFVTDRKNGFWNLHKWIESNNEVLAIY-S-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 389 (729)
Q Consensus 312 ~~~~~~~~g~~~l~~~d~~~g~~~~l~-~-~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~ 389 (729)
++.... .+ .|.++|+.+++..... . ....+....|.+. .++.++++...+|...+ ++..+++
T Consensus 156 l~~~~~-dg--~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-----------~~~~~l~~~~~dg~i~~--~d~~~~~ 219 (814)
T 3mkq_A 156 FASGCL-DR--TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL-----------PDKPYMITASDDLTIKI--WDYQTKS 219 (814)
T ss_dssp EEEEET-TS--EEEEEETTCSSCSEEEECCCTTCCCEEEECCS-----------TTCCEEEEECTTSEEEE--EETTTTE
T ss_pred EEEEeC-CC--eEEEEECCCCcceeEEecCCCCCEEEEEEEEC-----------CCCCEEEEEeCCCEEEE--EECCCCc
Confidence 545444 34 4666777665433322 1 1123333344331 24445566666675444 4666665
Q ss_pred e-EeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 390 L-SLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 390 ~-~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
. ..+......+..+ ..+++.+++.++.. ..++.+++.+++.
T Consensus 220 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~v~vwd~~~~~~ 262 (814)
T 3mkq_A 220 CVATLEGHMSNVSFAVFHPTLPIIISGSED---GTLKIWNSSTYKV 262 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEETTTCSE
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCcE
Confidence 3 3444455567666 44445555555533 3577778776653
No 324
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.88 E-value=3.3e-07 Score=92.00 Aligned_cols=235 Identities=10% Similarity=-0.002 Sum_probs=139.7
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCC--CCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDY--GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~--~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~ 233 (729)
.|+|.. .+.|+++++++ +..+.+.... ..+..+...++|+|+++.|+++... ...|++++++++..
T Consensus 3 ~l~~~~--~~~I~~~~~~g--~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~--------~~~I~~~~~~g~~~ 70 (267)
T 1npe_A 3 HLLFAQ--TGKIERLPLER--NTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS--------EPSIGRASLHGGEP 70 (267)
T ss_dssp EEEEEE--EEEEEEEEESS--SCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT--------TTEEEEEESSSCCC
T ss_pred EEEEEc--CCeEEEEEecC--cccccccceeeecCCCCcEEEEEEecCCCEEEEEECC--------CCEEEEEecCCCCc
Confidence 456664 34799999986 5433221100 0001344678899999987666432 25799999998776
Q ss_pred EEeee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-E
Q 004816 234 QVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-L 311 (729)
Q Consensus 234 ~~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l 311 (729)
+.+.. +.....+.+++|+++.|+++... ...|++++++ +... ..+..... .....++++|++. |
T Consensus 71 ~~~~~~~~~~p~~ia~d~~~~~lyv~d~~-------~~~I~~~~~~-g~~~--~~~~~~~~----~~P~~i~vd~~~g~l 136 (267)
T 1npe_A 71 TTIIRQDLGSPEGIALDHLGRTIFWTDSQ-------LDRIEVAKMD-GTQR--RVLFDTGL----VNPRGIVTDPVRGNL 136 (267)
T ss_dssp EEEECTTCCCEEEEEEETTTTEEEEEETT-------TTEEEEEETT-SCSC--EEEECSSC----SSEEEEEEETTTTEE
T ss_pred EEEEECCCCCccEEEEEecCCeEEEEECC-------CCEEEEEEcC-CCCE--EEEEECCC----CCccEEEEeeCCCEE
Confidence 65543 32345677899999999887632 3469999987 3322 22332221 2345678999766 6
Q ss_pred EEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceE
Q 004816 312 FFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 391 (729)
Q Consensus 312 ~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~ 391 (729)
|+.... .....|+++++++...+.+.... ... ...+.+.+ +++.||++.. +...|++++++++..+
T Consensus 137 yv~~~~-~~~~~I~~~~~dg~~~~~~~~~~--~~~------P~gia~d~---~~~~lyv~d~--~~~~I~~~~~~g~~~~ 202 (267)
T 1npe_A 137 YWTDWN-RDNPKIETSHMDGTNRRILAQDN--LGL------PNGLTFDA---FSSQLCWVDA--GTHRAECLNPAQPGRR 202 (267)
T ss_dssp EEEECC-SSSCEEEEEETTSCCCEEEECTT--CSC------EEEEEEET---TTTEEEEEET--TTTEEEEEETTEEEEE
T ss_pred EEEECC-CCCcEEEEEecCCCCcEEEEECC--CCC------CcEEEEcC---CCCEEEEEEC--CCCEEEEEecCCCceE
Confidence 655432 23567999998765544443211 111 12344442 5678887764 3447888999876655
Q ss_pred eeccCCcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 392 LLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 392 ~lt~~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
.+......-..+..+++.+++.... ...+++++.++++.
T Consensus 203 ~~~~~~~~P~gi~~d~~~lyva~~~---~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 203 KVLEGLQYPFAVTSYGKNLYYTDWK---TNSVIAMDLAISKE 241 (267)
T ss_dssp EEEECCCSEEEEEEETTEEEEEETT---TTEEEEEETTTTEE
T ss_pred EEecCCCCceEEEEeCCEEEEEECC---CCeEEEEeCCCCCc
Confidence 4433333334455566666654332 24788999887763
No 325
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.87 E-value=5.2e-07 Score=96.45 Aligned_cols=238 Identities=6% Similarity=-0.042 Sum_probs=143.6
Q ss_pred CceEEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEE
Q 004816 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (729)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~ 226 (729)
...+.++++.++.. ..++.|++|++.+ ++...+.... ....+...+|+|||+.|+....+ ..|.++
T Consensus 96 ~~~~~~s~~~l~~~-~~d~~v~lw~~~~--~~~~~~~~~~--~~~~v~~v~~s~~~~~l~~~~~d---------g~i~iw 161 (401)
T 4aez_A 96 LNLLDWSNLNVVAV-ALERNVYVWNADS--GSVSALAETD--ESTYVASVKWSHDGSFLSVGLGN---------GLVDIY 161 (401)
T ss_dssp CBCEEECTTSEEEE-EETTEEEEEETTT--CCEEEEEECC--TTCCEEEEEECTTSSEEEEEETT---------SCEEEE
T ss_pred EEEEeecCCCEEEE-ECCCeEEEeeCCC--CcEeEeeecC--CCCCEEEEEECCCCCEEEEECCC---------CeEEEE
Confidence 34567777665544 3577899999987 6554443321 13456788999999988776543 358899
Q ss_pred EcCCCceEE-eeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCcee
Q 004816 227 ALNGQNIQV-LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 305 (729)
Q Consensus 227 dl~~g~~~~-lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~w 305 (729)
++.+++... +...........| +++.|+..+ ....|.++|+. .+.. ....+.+.. ..+..+.|
T Consensus 162 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--------~dg~i~i~d~~-~~~~-~~~~~~~~~----~~v~~~~~ 225 (401)
T 4aez_A 162 DVESQTKLRTMAGHQARVGCLSW--NRHVLSSGS--------RSGAIHHHDVR-IANH-QIGTLQGHS----SEVCGLAW 225 (401)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEE--------TTSEEEEEETT-SSSC-EEEEEECCS----SCEEEEEE
T ss_pred ECcCCeEEEEecCCCCceEEEEE--CCCEEEEEc--------CCCCEEEEecc-cCcc-eeeEEcCCC----CCeeEEEE
Confidence 998876544 3334445566777 567776555 23459999987 3321 234445554 56678899
Q ss_pred CCCCcEEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEE--ECCeEEEEE
Q 004816 306 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR--QNGRSYLGI 382 (729)
Q Consensus 306 spDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~--~~g~~~ly~ 382 (729)
+|||+++++... .+ .|.++|+.+++..... .....+....|.+ ++..++++.. .++ .|.+
T Consensus 226 ~~~~~~l~s~~~-d~--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p------------~~~~ll~~~~gs~d~--~i~i 288 (401)
T 4aez_A 226 RSDGLQLASGGN-DN--VVQIWDARSSIPKFTKTNHNAAVKAVAWCP------------WQSNLLATGGGTMDK--QIHF 288 (401)
T ss_dssp CTTSSEEEEEET-TS--CEEEEETTCSSEEEEECCCSSCCCEEEECT------------TSTTEEEEECCTTTC--EEEE
T ss_pred cCCCCEEEEEeC-CC--eEEEccCCCCCccEEecCCcceEEEEEECC------------CCCCEEEEecCCCCC--EEEE
Confidence 999995444443 34 4667788776654433 3333344444543 5556666654 345 4566
Q ss_pred EECCCCceEeeccCCcceEEe-e-eeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 383 LDDFGHSLSLLDIPFTDIDNI-T-LGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 383 ~d~~~g~~~~lt~~~~~v~~~-~-~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+|+.+++..........+..+ . +++..++...+..+ ..++++++.+++.
T Consensus 289 ~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~d--g~i~v~~~~~~~~ 339 (401)
T 4aez_A 289 WNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPD--NNLSIWSYSSSGL 339 (401)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTT--CEEEEEEEETTEE
T ss_pred EECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCC--CcEEEEecCCccc
Confidence 687777654433444556666 3 44444443333233 4677777776654
No 326
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=98.87 E-value=1.2e-09 Score=120.99 Aligned_cols=128 Identities=18% Similarity=0.157 Sum_probs=86.7
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccc-hhhhHHHhh-CCcEEEEecCCC-CCCCchhHHHhhc
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWTS-RGWAFVDVNYGG-STGYGREFRERLL 544 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~-~~~~~~la~-~G~~v~~~d~rG-s~g~g~~~~~~~~ 544 (729)
|...+. +|.|... +.++.|+||++|||++....... ......|++ .|++|+.+|||. .-|++.... ..
T Consensus 95 dcl~l~--v~~P~~~-----~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~--~~ 165 (543)
T 2ha2_A 95 DCLYLN--VWTPYPR-----PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPG--SR 165 (543)
T ss_dssp CCCEEE--EEEESSC-----CSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTT--CS
T ss_pred cCCeEE--EeecCCC-----CCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCC--CC
Confidence 555554 4567541 14567999999998754333221 223456665 799999999994 222221100 00
Q ss_pred cCCCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHhC---CCcceEEEEeccc
Q 004816 545 GRWGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALAF---RDTFKAGASLYGV 604 (729)
Q Consensus 545 ~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~---~~~~~a~v~~~~~ 604 (729)
...+...+.|+.++++|+.++ ...|++||.|+|+|+||++++.++.. ..+|+++|+.+|.
T Consensus 166 ~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 231 (543)
T 2ha2_A 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGT 231 (543)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCC
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCC
Confidence 111223489999999999875 24699999999999999999887763 5689999999985
No 327
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.87 E-value=2.4e-07 Score=96.86 Aligned_cols=257 Identities=10% Similarity=0.029 Sum_probs=135.2
Q ss_pred EECCEEEEEECC----CCcEEEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCC-CCCCcceEEEE
Q 004816 152 IFGDTVIFSNYK----DQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ-DALNSTTEIVA 225 (729)
Q Consensus 152 ~~~~~i~~~~~~----~~~l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~-~~~~~~~~l~~ 225 (729)
+++.+++..+.. .+.|+++|..+ ++. ..+..+. ... +.+||||++++....-... ........|.+
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t--~~v~~~I~vG~-----~P~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEA--GRVIGMIDGGF-----LPN-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTT--TEEEEEEEECS-----SCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCC--CeEEEEEECCC-----CCc-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 344466666553 56899999987 443 3333321 113 8899999986555321000 00000246999
Q ss_pred EEcCCCceE-EeeeCC-------CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCC-----
Q 004816 226 IALNGQNIQ-VLVSGS-------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF----- 292 (729)
Q Consensus 226 ~dl~~g~~~-~lt~~~-------~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~----- 292 (729)
+|.+++++. .+.-+. ..-....+||||++|+...... ...|.++|++ +++......+.+.
T Consensus 114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~------~~~VsVID~~-t~~vv~tI~v~g~~~~~P 186 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP------APAVGVVDLE-GKAFKRMLDVPDCYHIFP 186 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS------SCEEEEEETT-TTEEEEEEECCSEEEEEE
T ss_pred EECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC------CCeEEEEECC-CCcEEEEEECCCcceeec
Confidence 999998764 342221 1234578999999987665321 2346666665 4443211111000
Q ss_pred ----------------------------------CCCccccccCceeC-CCCcEEEEEecCCCceEEEEEEcCCCeEEEe
Q 004816 293 ----------------------------------DPTIVESPTEPKWS-SKGELFFVTDRKNGFWNLHKWIESNNEVLAI 337 (729)
Q Consensus 293 ----------------------------------~~~~~~~~~~~~ws-pDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l 337 (729)
+.+-......+.|. +||+++|.+.. .+++.+|..++..+.+
T Consensus 187 ~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~----g~V~v~d~~~~~~~v~ 262 (386)
T 3sjl_D 187 TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYT----GKIHQIDLSSGDAKFL 262 (386)
T ss_dssp EETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTT----SEEEEEECTTSSCEEC
T ss_pred CCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCC----CEEEEEECCCCcceee
Confidence 00000001123442 56665555543 2467777665544332
Q ss_pred eccC---ccccCCcccccC-cceeeeeecCCCCEEEEEEEEC-------CeEEEEEEECCCCceE-eeccCCcceEEe--
Q 004816 338 YSLD---AEFSRPLWVFGI-NSYEIIQSHGEKNLIACSYRQN-------GRSYLGILDDFGHSLS-LLDIPFTDIDNI-- 403 (729)
Q Consensus 338 ~~~~---~~~~~~~w~~~~-~~~~~l~~~~~~~~l~~~s~~~-------g~~~ly~~d~~~g~~~-~lt~~~~~v~~~-- 403 (729)
.+.. .....+.|.++. ..+.+.+ +++++|+....+ ...+|+++|++++++. .+..+. ....+
T Consensus 263 ~~~~~~~~~~~~~g~~p~g~q~~a~~~---~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~-~~~~lav 338 (386)
T 3sjl_D 263 PAVEALTEAERADGWRPGGWQQVAYHR---ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSINV 338 (386)
T ss_dssp CCEESSCHHHHHTTEEECSSSCEEEET---TTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEE
T ss_pred cceeccccccccccccCCCcceeeECC---CCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-CcceEEE
Confidence 2110 000113455532 3345543 778888877543 3578999999998853 444332 23334
Q ss_pred eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 404 TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+.+++..+|.+.. ....+..+|..+++.
T Consensus 339 s~D~~~~ly~tn~--~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 339 SQDEKPLLYALST--GDKTLYIHDAESGEE 366 (386)
T ss_dssp CSSSSCEEEEEET--TTTEEEEEETTTCCE
T ss_pred CCCCCeEEEEEcC--CCCeEEEEECCCCcE
Confidence 4555545555542 235789999988874
No 328
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.86 E-value=4.3e-07 Score=94.92 Aligned_cols=187 Identities=12% Similarity=0.069 Sum_probs=112.8
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCe---ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~---~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~ 232 (729)
.++.+...++.|.+|++.+ +... .+..+ ....+...+|||||++|+....+. .+.++++.++.
T Consensus 29 ~~las~~~D~~i~iw~~~~--~~~~~~~~~~~~---h~~~v~~~~~sp~g~~l~s~s~D~---------~v~iw~~~~~~ 94 (345)
T 3fm0_A 29 TLLASCGGDRRIRIWGTEG--DSWICKSVLSEG---HQRTVRKVAWSPCGNYLASASFDA---------TTCIWKKNQDD 94 (345)
T ss_dssp SCEEEEETTSCEEEEEEET--TEEEEEEEECSS---CSSCEEEEEECTTSSEEEEEETTS---------CEEEEEECCC-
T ss_pred CEEEEEcCCCeEEEEEcCC--Ccceeeeeeccc---cCCcEEEEEECCCCCEEEEEECCC---------cEEEEEccCCC
Confidence 3445555678899999876 4321 12222 134578889999999887666543 46677777665
Q ss_pred eE---EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCC-eeeeEEecCCCCCccccccCceeCCC
Q 004816 233 IQ---VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD-VYKRVCVAGFDPTIVESPTEPKWSSK 308 (729)
Q Consensus 233 ~~---~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~-~~~~~~~~~~~~~~~~~~~~~~wspD 308 (729)
.+ .+..........+|+|||++|+..+.+ ..|.++|+. ++. ......+.+.. ..+..+.|+||
T Consensus 95 ~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D--------~~v~iwd~~-~~~~~~~~~~~~~h~----~~v~~~~~~p~ 161 (345)
T 3fm0_A 95 FECVTTLEGHENEVKSVAWAPSGNLLATCSRD--------KSVWVWEVD-EEDEYECVSVLNSHT----QDVKHVVWHPS 161 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECTTSSEEEEEETT--------SCEEEEEEC-TTSCEEEEEEECCCC----SCEEEEEECSS
T ss_pred eEEEEEccCCCCCceEEEEeCCCCEEEEEECC--------CeEEEEECC-CCCCeEEEEEecCcC----CCeEEEEECCC
Confidence 33 233344567788999999998876632 348888987 443 22234455554 55677899999
Q ss_pred CcEEEEEecCCCceEEEEEEcCCCeEEEee---ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEEC
Q 004816 309 GELFFVTDRKNGFWNLHKWIESNNEVLAIY---SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 385 (729)
Q Consensus 309 G~l~~~~~~~~g~~~l~~~d~~~g~~~~l~---~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~ 385 (729)
|++++.... .+.-.|| |..+++...+. .....+. .+.|.+ +++ ++++...++..+||....
T Consensus 162 ~~~l~s~s~-d~~i~~w--~~~~~~~~~~~~~~~h~~~v~---------~l~~sp---~g~-~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 162 QELLASASY-DDTVKLY--REEEDDWVCCATLEGHESTVW---------SLAFDP---SGQ-RLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp SSCEEEEET-TSCEEEE--EEETTEEEEEEEECCCSSCEE---------EEEECT---TSS-EEEEEETTSCEEEEEEEC
T ss_pred CCEEEEEeC-CCcEEEE--EecCCCEEEEEEecCCCCceE---------EEEECC---CCC-EEEEEeCCCeEEEecccc
Confidence 994444444 3544454 55555433222 2222222 334442 444 556667788888987654
No 329
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.86 E-value=1.7e-07 Score=102.06 Aligned_cols=253 Identities=9% Similarity=-0.021 Sum_probs=139.4
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcE
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRL 167 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l 167 (729)
.+.++.|+| ++.++.+.. .++...+|.....+ ++....+.. ..+.....++.++++ ..+++...++.+
T Consensus 104 ~v~~~~~s~d~~~l~~~~~---~dg~v~iwd~~~~~-~~~~~~~~~------~~~~~~v~~~~~sp~~~~l~~~~~~g~v 173 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACAD---SDKSLLVFDVDKTS-KNVLKLRKR------FCFSKRPNAISIAEDDTTVIIADKFGDV 173 (450)
T ss_dssp CEEEEEECTTSSEEEEEEG---GGTEEEEEEECSSS-SSCEEEEEE------EECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ceEEEEEcCCCCEEEEEEC---CCCeEEEEECcCCC-Cceeeeeec------ccCCCCceEEEEcCCCCEEEEEeCCCcE
Confidence 467899999 777666654 35777888876321 233222210 001112234445433 344455567899
Q ss_pred EEEeCCCCCCCCe-----ecCCCCCCCceeeecceecCC---CCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEe-e-
Q 004816 168 YKHSIDSKDSSPL-----PITPDYGEPLVSYADGIFDPR---FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVL-V- 237 (729)
Q Consensus 168 ~~~d~~~~~~~~~-----~lt~~~~~~~~~~~~~~~SPd---G~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~l-t- 237 (729)
+++++.+ +... .+... ...+..++|+|| |+.|+....+ ..|+++|+.+++.... .
T Consensus 174 ~~~~~~~--~~~~~~~~~~~~~h----~~~v~~~~~sp~~~~~~~l~s~~~d---------~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 174 YSIDINS--IPEEKFTQEPILGH----VSMLTDVHLIKDSDGHQFIITSDRD---------EHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp EEEETTS--CCCSSCCCCCSEEC----SSCEEEEEEEECTTSCEEEEEEETT---------SCEEEEEESCTTCEEEECC
T ss_pred EEEecCC--cccccccceeeecc----cCceEEEEEcCCCCCCcEEEEEcCC---------CcEEEEECCCCceeeeeec
Confidence 9999976 4332 22222 244677899999 8776655443 3588899988765432 3
Q ss_pred eCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecC-------------------CCCCccc
Q 004816 238 SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG-------------------FDPTIVE 298 (729)
Q Consensus 238 ~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~-------------------~~~~~~~ 298 (729)
........++|| ||++|+..+ ....|.++|+. +++......... .......
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~--------~d~~v~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAG--------GDDKIFAWDWK-TGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEF 308 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEE--------SSSEEEEEETT-TCCEEEEEECHHHHGGGCCTTSBC----------CBCC
T ss_pred CCCCceEEEEEC-CCCEEEEEe--------CCCeEEEEECC-CCcEeeeecchhhhhhhhhhcccccccccccccccceE
Confidence 344567788999 999988766 23469999998 676422111110 0000003
Q ss_pred cccCceeCCCCcEEEEEecCCCceEEEEE-EcCCCeEEEee--ccCccccCCcccccCcceeeeeecCCCCEEEEEEEE-
Q 004816 299 SPTEPKWSSKGELFFVTDRKNGFWNLHKW-IESNNEVLAIY--SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ- 374 (729)
Q Consensus 299 ~~~~~~wspDG~l~~~~~~~~g~~~l~~~-d~~~g~~~~l~--~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~- 374 (729)
.+..+.|+|||++++......+.-.||.+ +..+++.+.+. .....+ ..+.|. .+ .++++...
T Consensus 309 ~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v---------~~~~~~----~~-~~~v~~~~~ 374 (450)
T 2vdu_B 309 AVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNV---------ISLSAH----ND-EFQVTLDNK 374 (450)
T ss_dssp CEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCE---------EEEEEE----TT-EEEEEECCT
T ss_pred EEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCce---------EEEEec----CC-cEEEEEecc
Confidence 45678999999944444421454445544 22333333322 211111 234444 33 34444332
Q ss_pred ------CCeEEEEEEECCCCceE
Q 004816 375 ------NGRSYLGILDDFGHSLS 391 (729)
Q Consensus 375 ------~g~~~ly~~d~~~g~~~ 391 (729)
+....||.++.++++++
T Consensus 375 ~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 375 ESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp TCCSSCCCSEEEEEEETTTTEEE
T ss_pred cCCCCCCcceEEEEEEcCCCeEE
Confidence 12248888888777664
No 330
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.85 E-value=5.5e-07 Score=102.12 Aligned_cols=234 Identities=8% Similarity=0.005 Sum_probs=141.1
Q ss_pred eEEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEc
Q 004816 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (729)
Q Consensus 149 ~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl 228 (729)
+|+++++.|++.. ++.++++++.++ .....+... ...+...+|||||++|+-...+ ..|.++|+
T Consensus 25 ~~spdg~~l~~~~--~~~v~l~~~~~~-~~~~~~~~h----~~~v~~~~~spdg~~lasg~~d---------~~v~lWd~ 88 (611)
T 1nr0_A 25 GNTPAGDKIQYCN--GTSVYTVPVGSL-TDTEIYTEH----SHQTTVAKTSPSGYYCASGDVH---------GNVRIWDT 88 (611)
T ss_dssp EECTTSSEEEEEE--TTEEEEEETTCS-SCCEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEEEES
T ss_pred eeCCCCCEEEeCC--CCEEEEecCCCc-ccCeEecCC----CCceEEEEECCCCcEEEEEeCC---------CCEEEeEC
Confidence 3555666777765 357999999752 445556554 3457888999999987766543 46888898
Q ss_pred CCCce---EEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCcee
Q 004816 229 NGQNI---QVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 305 (729)
Q Consensus 229 ~~g~~---~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~w 305 (729)
.+++. ..+....+.....+|||||++|+..+.+... ...|+++|. ++. ...+.+.. ..+..+.|
T Consensus 89 ~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~----~~~v~~wd~---~~~--~~~l~gh~----~~v~~v~f 155 (611)
T 1nr0_A 89 TQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER----FGHVFLFDT---GTS--NGNLTGQA----RAMNSVDF 155 (611)
T ss_dssp SSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSC----SEEEEETTT---CCB--CBCCCCCS----SCEEEEEE
T ss_pred CCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCc----eeEEEEeeC---CCC--cceecCCC----CCceEEEE
Confidence 75442 2233344567788999999999877633211 235666653 332 22344554 56678899
Q ss_pred CCCCc-EEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEE
Q 004816 306 SSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 383 (729)
Q Consensus 306 spDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~ 383 (729)
+||+. +++.... .+. +.++|..+++..... .....+. .+.|.| +++ ++++...++...||
T Consensus 156 ~p~~~~~l~s~s~-D~~--v~lwd~~~~~~~~~l~~H~~~V~---------~v~fsp---dg~-~las~s~D~~i~lw-- 217 (611)
T 1nr0_A 156 KPSRPFRIISGSD-DNT--VAIFEGPPFKFKSTFGEHTKFVH---------SVRYNP---DGS-LFASTGGDGTIVLY-- 217 (611)
T ss_dssp CSSSSCEEEEEET-TSC--EEEEETTTBEEEEEECCCSSCEE---------EEEECT---TSS-EEEEEETTSCEEEE--
T ss_pred CCCCCeEEEEEeC-CCe--EEEEECCCCeEeeeeccccCceE---------EEEECC---CCC-EEEEEECCCcEEEE--
Confidence 99997 5555544 444 444566666544333 2222222 334442 544 55666678876666
Q ss_pred ECCCCceE-eec-------cCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 384 DDFGHSLS-LLD-------IPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 384 d~~~g~~~-~lt-------~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
+..+++.. .+. .....|..+ ..+++..++.++.. ..+.++|+.+++
T Consensus 218 d~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---~~v~lWd~~~~~ 272 (611)
T 1nr0_A 218 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---KTIKIWNVATLK 272 (611)
T ss_dssp ETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTTE
T ss_pred ECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC---CeEEEEeCCCCc
Confidence 55555543 332 234457776 44555566665543 367777877765
No 331
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.84 E-value=9.5e-07 Score=91.64 Aligned_cols=200 Identities=9% Similarity=0.093 Sum_probs=113.9
Q ss_pred CceEEEECCEEEEEECCCCcEEEEeCCCCCCCCe---ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEE
Q 004816 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (729)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~---~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l 223 (729)
..++.++++ ++.+...++.|.+|++.+ +..+ .+... .....+...+|+|||+.|+....+ ..|
T Consensus 17 v~~~~~s~~-~las~~~D~~i~lw~~~~--~~~~~~~~~~~~--~h~~~v~~v~~sp~~~~las~s~D---------~~v 82 (330)
T 2hes_X 17 IWSFDFSQG-ILATGSTDRKIKLVSVKY--DDFTLIDVLDET--AHKKAIRSVAWRPHTSLLAAGSFD---------STV 82 (330)
T ss_dssp EEEEEEETT-EEEEEESSSCEEEEECSS--SCCEEEEEECTT--CCCSCEEEEEECTTSSEEEEEETT---------SCE
T ss_pred eeeeccCCC-EEEEEcCCCEEEEEEecC--CCeEEEEEEecC--CccCCEEEEEECCCCCEEEEEeCC---------CcE
Confidence 345666777 566666788899999976 4322 22111 013456788999999987766543 346
Q ss_pred EEEEcCCC-------ce-EEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCC-eeeeEEecCCCC
Q 004816 224 VAIALNGQ-------NI-QVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD-VYKRVCVAGFDP 294 (729)
Q Consensus 224 ~~~dl~~g-------~~-~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~-~~~~~~~~~~~~ 294 (729)
.++++..+ +. ..+..........+|||||++|+-.+.+ ..|.++|+...+. ......+.+..
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D--------~~v~iwd~~~~~~~~~~~~~~~~h~- 153 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD--------KSVWIWETDESGEEYECISVLQEHS- 153 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT--------SCEEEEECCTTCCCCEEEEEECCCS-
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC--------CEEEEEeccCCCCCeEEEEEeccCC-
Confidence 77777432 11 2233334556778999999998876632 3488889842332 22234455555
Q ss_pred CccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCC-CCEEEEEEE
Q 004816 295 TIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGE-KNLIACSYR 373 (729)
Q Consensus 295 ~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~-~~~l~~~s~ 373 (729)
..+..+.|+|||++++.... .+.-+|| |..++..+.+..... .....| .+.|.+ + +...+++..
T Consensus 154 ---~~v~~v~~~p~~~~l~s~s~-D~~i~iW--~~~~~~~~~~~~~~~-h~~~v~-----~~~~~~---~~~~~~l~s~s 218 (330)
T 2hes_X 154 ---QDVKHVIWHPSEALLASSSY-DDTVRIW--KDYDDDWECVAVLNG-HEGTVW-----SSDFDK---TEGVFRLCSGS 218 (330)
T ss_dssp ---SCEEEEEECSSSSEEEEEET-TSCEEEE--EEETTEEEEEEEECC-CSSCEE-----EEEECC---SSSSCEEEEEE
T ss_pred ---CceEEEEECCCCCEEEEEcC-CCeEEEE--ECCCCCeeEEEEccC-CCCcEE-----EEEecC---CCCeeEEEEEe
Confidence 56678899999995555554 4555555 444443222221110 112222 223332 3 234566777
Q ss_pred ECCeEEEEEEE
Q 004816 374 QNGRSYLGILD 384 (729)
Q Consensus 374 ~~g~~~ly~~d 384 (729)
.++..+||.+.
T Consensus 219 ~D~~v~iw~~~ 229 (330)
T 2hes_X 219 DDSTVRVWKYM 229 (330)
T ss_dssp TTSCEEEEEEE
T ss_pred CCCeEEEEEec
Confidence 78888888765
No 332
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.84 E-value=7.6e-09 Score=107.13 Aligned_cols=207 Identities=9% Similarity=0.028 Sum_probs=113.8
Q ss_pred EEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCCcE
Q 004816 494 LLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRL 573 (729)
Q Consensus 494 ~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri 573 (729)
.|+++||.........|..++..|. .+|.|+.+|++|.+.............+ ....+|+.+.++.+. +..++
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~-~~~~v~~~d~~G~g~~~~~~~~~~~~~~-~~~a~~~~~~i~~~~-----~~~p~ 163 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQ-EERDFLAVPLPGYGTGTGTGTALLPADL-DTALDAQARAILRAA-----GDAPV 163 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTT-TTCCEEEECCTTCCBC---CBCCEESSH-HHHHHHHHHHHHHHH-----TTSCE
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcC-CCCceEEecCCCCCCCcccccCCCCCCH-HHHHHHHHHHHHHhc-----CCCCE
Confidence 7899998212333455666666665 6899999999976542000000000000 011333333333332 23679
Q ss_pred EEEEcChHHHHHHHHHh-C----CCcceEEEEeccccChhH--HhhhcchhhhhhhhhhcC--Ch------hhhhhcCcc
Q 004816 574 CITGGSAGGYTTLAALA-F----RDTFKAGASLYGVADLSM--LRAETHKFESRYIDNLVG--SE------KDYYEKSPI 638 (729)
Q Consensus 574 ~i~G~S~GG~~a~~~~~-~----~~~~~a~v~~~~~~d~~~--~~~~~~~~~~~~~~~~~~--~~------~~~~~~sp~ 638 (729)
.++|||+||.+|+.++. . ++.++++++..+...... ............+..... .. ..|...-..
T Consensus 164 ~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 2hfk_A 164 VLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAG 243 (319)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHS
T ss_pred EEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHHHHh
Confidence 99999999999998886 3 567999998876532110 000000000000000000 00 111110001
Q ss_pred cccCCCCCCEEEEEeCCCCCCChHH-HHHHHHHHHhCCCCEEEEEECCCCcccCCcccHHHHHHHHHHHHHHHhC
Q 004816 639 NFVDKFSCPIILFQGLEDKVVPPDQ-ARKIYKALKENGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARVVG 712 (729)
Q Consensus 639 ~~~~~i~~PvL~i~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 712 (729)
.....+++|+|+++| +|..+++.. ...+.+. ...+++++.++ ++|.....+......+.+.+|+.+...
T Consensus 244 ~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~---~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 244 PRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAH---WDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSWLDAIEG 313 (319)
T ss_dssp CCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCC---CSSCSEEEEES-SCTTHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcCCCEEEEEc-CCCCCCccccccchhhc---CCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 124678899999999 999888754 2222111 12256888998 488743323677888889999988654
No 333
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.84 E-value=3.3e-07 Score=98.04 Aligned_cols=238 Identities=11% Similarity=0.031 Sum_probs=138.1
Q ss_pred CceEEEE--CCEEEEEECCCCcEEEEeC----CCCCCC-------CeecCCCCCC------CceeeecceecCCCCEEEE
Q 004816 147 GGAFRIF--GDTVIFSNYKDQRLYKHSI----DSKDSS-------PLPITPDYGE------PLVSYADGIFDPRFNRYVT 207 (729)
Q Consensus 147 ~~~~~~~--~~~i~~~~~~~~~l~~~d~----~~~~~~-------~~~lt~~~~~------~~~~~~~~~~SPdG~~l~~ 207 (729)
+.+..++ +..++++...++.|.+|++ .+ ++ ...+...... ....+...+|+|||+.|+.
T Consensus 48 v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 125 (425)
T 1r5m_A 48 IVSSTWNPLDESILAYGEKNSVARLARIVETDQE--GKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVT 125 (425)
T ss_dssp CSEEEECSSCTTEEEEEETBTEEEEEEEEEC--------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEE
T ss_pred eEEEEECCCCCcEEEEecCCceEEEEEEecccCC--ccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEE
Confidence 3344444 3325555566788999999 76 44 2233321000 1235678899999998877
Q ss_pred EEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeE
Q 004816 208 VREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRV 287 (729)
Q Consensus 208 ~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~ 287 (729)
...+ ..|.+++..+.....+...........|+|||++|+..+. ...|.++|+. +++. ..
T Consensus 126 ~~~d---------g~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------d~~i~iwd~~-~~~~--~~ 185 (425)
T 1r5m_A 126 GVEN---------GELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDV--------ENVTILWNVI-SGTV--MQ 185 (425)
T ss_dssp EETT---------SCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEET--------TCCEEEEETT-TTEE--EE
T ss_pred EeCC---------CeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEec--------CCeEEEEECC-CCcE--EE
Confidence 6543 3588888665555666555667788999999999887662 2348899987 5654 22
Q ss_pred EecCCCCCcccc---------------ccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccc
Q 004816 288 CVAGFDPTIVES---------------PTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVF 351 (729)
Q Consensus 288 ~~~~~~~~~~~~---------------~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~ 351 (729)
.+.... .. +..+.|++++.++..... ..|+++|+.+++..... .....+..
T Consensus 186 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~i~~~d~~~~~~~~~~~~~~~~i~~----- 252 (425)
T 1r5m_A 186 HFELKE----TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK----GAIFVYQITEKTPTGKLIGHHGPISV----- 252 (425)
T ss_dssp EECCC-------------------CCCBSCCEEEETTEEEEECGG----GCEEEEETTCSSCSEEECCCSSCEEE-----
T ss_pred Eeeccc----cCccceeeccccCCcceeeEEEEcCCCEEEEEcCC----CeEEEEEcCCCceeeeeccCCCceEE-----
Confidence 333222 22 677899999865444333 35777888776544333 22222222
Q ss_pred cCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCc-eEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcC
Q 004816 352 GINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS-LSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLD 429 (729)
Q Consensus 352 ~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~-~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~ 429 (729)
+.|.+ +++ ++++...+|...+| ++.+++ ...+......+..+ ..+++ .++..+.. ..++++|+.
T Consensus 253 ----~~~~~---~~~-~l~~~~~d~~i~i~--d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d---~~i~i~d~~ 318 (425)
T 1r5m_A 253 ----LEFND---TNK-LLLSASDDGTLRIW--HGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMD---GSVRLWSLK 318 (425)
T ss_dssp ----EEEET---TTT-EEEEEETTSCEEEE--CSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETT---SEEEEEETT
T ss_pred ----EEECC---CCC-EEEEEcCCCEEEEE--ECCCCccceEecCCCccEEEEEECCCC-EEEEEeCC---CcEEEEECC
Confidence 33432 555 45555566765555 655554 34444455567776 44455 55544433 478888887
Q ss_pred CCcc
Q 004816 430 DHKL 433 (729)
Q Consensus 430 ~~~~ 433 (729)
+++.
T Consensus 319 ~~~~ 322 (425)
T 1r5m_A 319 QNTL 322 (425)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 7653
No 334
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.83 E-value=5.2e-07 Score=94.14 Aligned_cols=208 Identities=10% Similarity=0.030 Sum_probs=119.0
Q ss_pred CccCceEEcC-C--CcEEEEeecCCCCCceEEEEcCCCCCC-CCcccCCCCCcccccccccCCceEEEECCEEEEEECCC
Q 004816 89 KRLGGTAVDG-H--GRLIWLESRPTEAGRGVLVKEPAKAGD-EPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD 164 (729)
Q Consensus 89 ~~~~~~~~~p-g--~~~~~~~~~~~~~~~~~l~~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 164 (729)
..+..+.|+| + +.++++.. .++...+|..... . ....+......+....+ ....+|++++. .+++...+
T Consensus 66 ~~v~~~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~-~~~~~~s~~~~-~l~~~~~d 138 (357)
T 3i2n_A 66 KPIKCGTFGATSLQQRYLATGD---FGGNLHIWNLEAP--EMPVYSVKGHKEIINAIDG-IGGLGIGEGAP-EIVTGSRD 138 (357)
T ss_dssp SCEEEEECTTCCTTTCCEEEEE---TTSCEEEECTTSC--SSCSEEECCCSSCEEEEEE-ESGGGCC-CCC-EEEEEETT
T ss_pred CcEEEEEEcCCCCCCceEEEec---CCCeEEEEeCCCC--CccEEEEEecccceEEEee-ccccccCCCcc-EEEEEeCC
Confidence 3556788998 4 45555544 3567677765433 1 12222211101110000 00012333343 44555567
Q ss_pred CcEEEEeCCCCCCC--CeecCCCCCCCceeeecce----ecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee
Q 004816 165 QRLYKHSIDSKDSS--PLPITPDYGEPLVSYADGI----FDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS 238 (729)
Q Consensus 165 ~~l~~~d~~~~~~~--~~~lt~~~~~~~~~~~~~~----~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~ 238 (729)
+.|.+||+.+ +. ...+....+.....+.... |+|+|+.++....+ ..|+++|+.+++......
T Consensus 139 ~~i~vwd~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~ 207 (357)
T 3i2n_A 139 GTVKVWDPRQ--KDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN---------GDIKLFDLRNMALRWETN 207 (357)
T ss_dssp SCEEEECTTS--CSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT---------SEEEEEETTTTEEEEEEE
T ss_pred CeEEEEeCCC--CCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC---------CeEEEEECccCceeeecC
Confidence 8999999987 43 4444332211112333444 89999987766543 469999999988766666
Q ss_pred CCCeeeeeeeCC---CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeee-eE--EecCCCCCccccccCceeCCCCc-E
Q 004816 239 GSDFYAFPRMDP---RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYK-RV--CVAGFDPTIVESPTEPKWSSKGE-L 311 (729)
Q Consensus 239 ~~~~~~~~~~SP---DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~-~~--~~~~~~~~~~~~~~~~~wspDG~-l 311 (729)
.........|+| ||+.|+... ....|.++|+. +++... .. ...+.. ..+..+.|+|||+ +
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~~--------~dg~i~i~d~~-~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~ 274 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVATS--------LEGKFHVFDMR-TQHPTKGFASVSEKAHK----STVWQVRHLPQNREL 274 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEEE--------STTEEEEEEEE-EEETTTEEEEEEEECCS----SCEEEEEEETTEEEE
T ss_pred CCCceEEEEcCCCCCCCCEEEEEC--------CCCeEEEEeCc-CCCcccceeeeccCCCc----CCEEEEEECCCCCcE
Confidence 666778899999 999888765 23458888887 443211 11 122444 5667889999998 7
Q ss_pred EEEEecCCCceEEEEEE
Q 004816 312 FFVTDRKNGFWNLHKWI 328 (729)
Q Consensus 312 ~~~~~~~~g~~~l~~~d 328 (729)
++.... .+.-.||.++
T Consensus 275 l~~~~~-dg~i~iwd~~ 290 (357)
T 3i2n_A 275 FLTAGG-AGGLHLWKYE 290 (357)
T ss_dssp EEEEET-TSEEEEEEEE
T ss_pred EEEEeC-CCcEEEeecC
Confidence 776665 5655555443
No 335
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.83 E-value=9.7e-07 Score=91.98 Aligned_cols=225 Identities=10% Similarity=0.047 Sum_probs=136.0
Q ss_pred EEEEEECCCCcEEEEeCCCCCCC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc--
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN-- 232 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~-- 232 (729)
.++++...++.|.+||+.+ +. ...+... ...+...+|+|||+.|+....+ ..+.++++.+++
T Consensus 68 ~~l~s~s~Dg~v~iWd~~~--~~~~~~~~~~----~~~v~~~~~s~~~~~l~s~~~d---------~~v~iw~~~~~~~~ 132 (340)
T 1got_B 68 RLLLSASQDGKLIIWDSYT--TNKVHAIPLR----SSWVMTCAYAPSGNYVACGGLD---------NICSIYNLKTREGN 132 (340)
T ss_dssp SEEEEEETTTEEEEEETTT--CCEEEEEECS----SSCEEEEEECTTSSEEEEEETT---------CEEEEEETTTCSBS
T ss_pred CEEEEEeCCCcEEEEECCC--CCcceEeecC----CccEEEEEECCCCCEEEEEeCC---------CeEEEEECccCCCc
Confidence 4566777788999999886 43 3333333 2346778899999987766543 467888887653
Q ss_pred ---eEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCC
Q 004816 233 ---IQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 309 (729)
Q Consensus 233 ---~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG 309 (729)
.+.+....+......|+||++ |+..+ . ...|.++|+. +++. ...+.+.. ..+..+.|+|||
T Consensus 133 ~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s-~-------d~~i~~wd~~-~~~~--~~~~~~h~----~~v~~~~~~~~~ 196 (340)
T 1got_B 133 VRVSRELAGHTGYLSCCRFLDDNQ-IVTSS-G-------DTTCALWDIE-TGQQ--TTTFTGHT----GDVMSLSLAPDT 196 (340)
T ss_dssp CEEEEEEECCSSCEEEEEEEETTE-EEEEE-T-------TSCEEEEETT-TTEE--EEEECCCS----SCEEEEEECTTS
T ss_pred ceeEEEecCCCccEEEEEECCCCc-EEEEE-C-------CCcEEEEECC-CCcE--EEEEcCCC----CceEEEEECCCC
Confidence 122333445566778999986 55444 2 2348899988 6654 44555554 566788999999
Q ss_pred cEEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCC
Q 004816 310 ELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGH 388 (729)
Q Consensus 310 ~l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g 388 (729)
++++.... .+ .|.++|+.+++..... .....+. .+.|.| +++ ++++...+|..+|| |+.++
T Consensus 197 ~~l~sg~~-d~--~v~~wd~~~~~~~~~~~~h~~~v~---------~v~~~p---~~~-~l~s~s~d~~v~iw--d~~~~ 258 (340)
T 1got_B 197 RLFVSGAC-DA--SAKLWDVREGMCRQTFTGHESDIN---------AICFFP---NGN-AFATGSDDATCRLF--DLRAD 258 (340)
T ss_dssp SEEEEEET-TS--CEEEEETTTCSEEEEECCCSSCEE---------EEEECT---TSS-EEEEEETTSCEEEE--ETTTT
T ss_pred CEEEEEeC-CC--cEEEEECCCCeeEEEEcCCcCCEE---------EEEEcC---CCC-EEEEEcCCCcEEEE--ECCCC
Confidence 96555544 34 4556687777654333 2222222 234432 444 55566677776666 66555
Q ss_pred ceE-eeccC--CcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 389 SLS-LLDIP--FTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 389 ~~~-~lt~~--~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
+.. .+... ...+..+ ..+++.+++.++.. ..+.++|...++
T Consensus 259 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d---~~i~vwd~~~~~ 303 (340)
T 1got_B 259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDD---FNCNVWDALKAD 303 (340)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETT---SEEEEEETTTCC
T ss_pred cEEEEEccCCcccceEEEEECCCCCEEEEECCC---CeEEEEEcccCc
Confidence 432 23222 2246666 44555566655543 367777776654
No 336
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.83 E-value=4.3e-09 Score=113.56 Aligned_cols=111 Identities=10% Similarity=-0.088 Sum_probs=80.0
Q ss_pred CCCCEEEEEcCCCCCCccccchh-hhHHHhhC-CcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCC
Q 004816 490 EKPPLLVKSHGGPTSEARGILNL-SIQYWTSR-GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 567 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~~~~~~~-~~~~la~~-G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 567 (729)
...|+||++||.+... ...|.. .+..|.++ ||.|+++|+||.+.... ..... +. ....+|+.+++++|.++..
T Consensus 68 ~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~--~~~~~-~~-~~~~~dl~~li~~L~~~~g 142 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEY--TQASY-NT-RVVGAEIAFLVQVLSTEMG 142 (452)
T ss_dssp TTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCH--HHHHH-HH-HHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechhcccCch--hHhHh-hH-HHHHHHHHHHHHHHHHhcC
Confidence 3458999999986544 233444 55666654 99999999997654331 11110 00 1225788888999876544
Q ss_pred CCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEecccc
Q 004816 568 ADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVA 605 (729)
Q Consensus 568 ~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~ 605 (729)
++.+++.|+|||+||.+|+.++. +|+++++++++.|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 143 YSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 56789999999999999999998 999999999998754
No 337
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.82 E-value=8.3e-07 Score=92.03 Aligned_cols=243 Identities=13% Similarity=0.059 Sum_probs=133.2
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV 235 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~ 235 (729)
.+++....++.|+++++++ ++.+.+.... ......+.++|||+.++....... ....|++++.++++.+.
T Consensus 57 ~l~~~~~~~~~i~~~d~~~--~~~~~~~~~~---~~~~~~i~~~~dg~l~v~~~~~~~-----~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 57 QLFLLDVFEGNIFKINPET--KEIKRPFVSH---KANPAAIKIHKDGRLFVCYLGDFK-----STGGIFAATENGDNLQD 126 (333)
T ss_dssp CEEEEETTTCEEEEECTTT--CCEEEEEECS---SSSEEEEEECTTSCEEEEECTTSS-----SCCEEEEECTTSCSCEE
T ss_pred CEEEEECCCCEEEEEeCCC--CcEEEEeeCC---CCCcceEEECCCCcEEEEeCCCCC-----CCceEEEEeCCCCEEEE
Confidence 5666766677999999987 7666654211 234577889999985444322210 02479999999888764
Q ss_pred eee---CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-E
Q 004816 236 LVS---GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-L 311 (729)
Q Consensus 236 lt~---~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l 311 (729)
+.. .........++|||+ |++....... ......||+++.+ +++... +.... .....+.|+|||+ +
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~-~~~~~~l~~~~~~-~~~~~~--~~~~~-----~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYS-TNPLGGVYYVSPD-FRTVTP--IIQNI-----SVANGIALSTDEKVL 196 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSC-EEEEECCCBT-TBCCEEEEEECTT-SCCEEE--EEEEE-----SSEEEEEECTTSSEE
T ss_pred EEccCccCCcccceEECCCCC-EEEEeccccc-cCCCceEEEEeCC-CCEEEE--eecCC-----CcccceEECCCCCEE
Confidence 432 123455679999997 5555432110 0123569998876 555432 22221 2235688999998 5
Q ss_pred EEEEecCCCceEEEEEEcCC-C-eEEEeecc-CccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCC
Q 004816 312 FFVTDRKNGFWNLHKWIESN-N-EVLAIYSL-DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGH 388 (729)
Q Consensus 312 ~~~~~~~~g~~~l~~~d~~~-g-~~~~l~~~-~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g 388 (729)
++.... ...|+++++++ + ....+... ...... .. ....+.+. .++.+++....++ .|++++.+++
T Consensus 197 ~v~~~~---~~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~--~~~~i~~d----~~G~l~v~~~~~~--~v~~~d~~g~ 264 (333)
T 2dg1_A 197 WVTETT---ANRLHRIALEDDGVTIQPFGATIPYYFTG-HE--GPDSCCID----SDDNLYVAMYGQG--RVLVFNKRGY 264 (333)
T ss_dssp EEEEGG---GTEEEEEEECTTSSSEEEEEEEEEEECCS-SS--EEEEEEEB----TTCCEEEEEETTT--EEEEECTTSC
T ss_pred EEEeCC---CCeEEEEEecCCCcCcccccceEEEecCC-CC--CCCceEEC----CCCCEEEEEcCCC--EEEEECCCCC
Confidence 554432 34688888853 2 33222100 000000 00 11234443 3345655554334 5777788766
Q ss_pred ceEeeccCCc------ceEEe--eeeCCEEEEEEeCC--CCCceEEEEEcCC
Q 004816 389 SLSLLDIPFT------DIDNI--TLGNDCLFVEGASG--VEPSSVAKVTLDD 430 (729)
Q Consensus 389 ~~~~lt~~~~------~v~~~--~~~~~~~~~~~~~~--~~~~~ly~~d~~~ 430 (729)
..+.+..+.. .+..+ .++++.+++..... .....||++++..
T Consensus 265 ~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 265 PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSS
T ss_pred EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEeccc
Confidence 6666654432 23444 33344555544432 2234688887654
No 338
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.82 E-value=8e-07 Score=93.52 Aligned_cols=105 Identities=7% Similarity=0.020 Sum_probs=63.7
Q ss_pred CCcEEEEeCCCCCCCCe-ecCCCCCCCceeeecceecCCCCEEEEEEeccCC-CCCCcceEEEEEEcCCCceE-EeeeC-
Q 004816 164 DQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ-DALNSTTEIVAIALNGQNIQ-VLVSG- 239 (729)
Q Consensus 164 ~~~l~~~d~~~~~~~~~-~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~-~~~~~~~~l~~~dl~~g~~~-~lt~~- 239 (729)
++.++++|.++ ++.. .+..+ ... .+++||||++++.+.+.... ........|.++|+++++.. .+.-.
T Consensus 30 d~~v~v~D~~t--~~~~~~i~~g-----~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~ 101 (361)
T 2oiz_A 30 ESRVHVYDYTN--GKFLGMVPTA-----FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP 101 (361)
T ss_dssp GCEEEEEETTT--CCEEEEEECC-----EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT
T ss_pred cCeEEEEECCC--CeEEEEecCC-----CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc
Confidence 45899999887 5443 33222 233 78999999987665431100 00001246899999987764 33322
Q ss_pred -----CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe
Q 004816 240 -----SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV 283 (729)
Q Consensus 240 -----~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~ 283 (729)
.....+.++||||++|+...... ...|.++|++ +++.
T Consensus 102 ~~~~~g~~p~~i~~spdg~~l~v~n~~~------~~~v~v~d~~-~~~~ 143 (361)
T 2oiz_A 102 KRVQGLNYDGLFRQTTDGKFIVLQNASP------ATSIGIVDVA-KGDY 143 (361)
T ss_dssp TBCCBCCCGGGEEECTTSSEEEEEEESS------SEEEEEEETT-TTEE
T ss_pred cccccCCCcceEEECCCCCEEEEECCCC------CCeEEEEECC-CCcE
Confidence 12334678999999987665321 2458888887 5543
No 339
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.82 E-value=1.1e-09 Score=121.50 Aligned_cols=110 Identities=19% Similarity=0.181 Sum_probs=79.6
Q ss_pred CCEEEEEcCCCCCCcccc-chhhhHHHhhCCcEEEEecCCCCC-CCchhHHHhhccCCCcccHHHHHHHHHHHHhC---C
Q 004816 492 PPLLVKSHGGPTSEARGI-LNLSIQYWTSRGWAFVDVNYGGST-GYGREFRERLLGRWGIVDVNDCCSCATFLVGS---G 566 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~-~~~~~~~la~~G~~v~~~d~rGs~-g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~ 566 (729)
.|+||++|||++...... .....+.|+++|+.|+.+|||.+. |+..... ....+...+.|+.++++|+.++ .
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~---~~~~~n~gl~D~~~al~wv~~~i~~f 191 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNS---TSVPGNAGLRDMVTLLKWVQRNAHFF 191 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSS---SSCCSCHHHHHHHHHHHHHHHHTGGG
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCcc---cCCCCchhHHHHHHHHHHHHHHHHHh
Confidence 799999999865433222 122456778899999999999531 1111100 0112234589999999999876 3
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHh---CCCcceEEEEeccc
Q 004816 567 KADEKRLCITGGSAGGYTTLAALA---FRDTFKAGASLYGV 604 (729)
Q Consensus 567 ~~d~~ri~i~G~S~GG~~a~~~~~---~~~~~~a~v~~~~~ 604 (729)
..|+++|.|+|+|+||.+++.++. .+..|+++|+.+|.
T Consensus 192 ggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 192 GGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGT 232 (551)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred CCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCC
Confidence 468999999999999999988886 35689999999985
No 340
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.81 E-value=3.8e-07 Score=97.29 Aligned_cols=195 Identities=11% Similarity=0.030 Sum_probs=116.5
Q ss_pred eeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeC-------------------CCeeeeeeeCCCC
Q 004816 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSG-------------------SDFYAFPRMDPRG 252 (729)
Q Consensus 192 ~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~-------------------~~~~~~~~~SPDG 252 (729)
.+...+|||||++|+...+ ..+.++++.+++......+ .......+|||||
T Consensus 66 ~V~~v~fspdg~~la~g~~----------~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg 135 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGCN----------KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG 135 (393)
T ss_dssp CCCEEEECTTSSEEEEECB----------SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS
T ss_pred EEEEEEECCCCCEEEEEcC----------CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCC
Confidence 3467789999998876532 2356678777765332211 1125678999999
Q ss_pred CeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCC
Q 004816 253 ERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNN 332 (729)
Q Consensus 253 ~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g 332 (729)
++|+..+. ...|.++|+. +++. ...+.+.. ..+..+.|+|||+.++.... .+ .|.++|+.++
T Consensus 136 ~~l~s~~~--------d~~i~iwd~~-~~~~--~~~~~~h~----~~v~~~~~~p~~~~l~s~s~-d~--~v~iwd~~~~ 197 (393)
T 1erj_A 136 KFLATGAE--------DRLIRIWDIE-NRKI--VMILQGHE----QDIYSLDYFPSGDKLVSGSG-DR--TVRIWDLRTG 197 (393)
T ss_dssp SEEEEEET--------TSCEEEEETT-TTEE--EEEECCCS----SCEEEEEECTTSSEEEEEET-TS--EEEEEETTTT
T ss_pred CEEEEEcC--------CCeEEEEECC-CCcE--EEEEccCC----CCEEEEEEcCCCCEEEEecC-CC--cEEEEECCCC
Confidence 99987662 2348999988 6654 45566665 56778899999994444443 33 4666788888
Q ss_pred eEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce-Eeec-------cCCcceEEe-
Q 004816 333 EVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-SLLD-------IPFTDIDNI- 403 (729)
Q Consensus 333 ~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~-~~lt-------~~~~~v~~~- 403 (729)
+..........+....|.+ .++.++++...++...|| |..+++. ..+. .....+..+
T Consensus 198 ~~~~~~~~~~~v~~~~~~~------------~~~~~l~~~s~d~~v~iw--d~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 263 (393)
T 1erj_A 198 QCSLTLSIEDGVTTVAVSP------------GDGKYIAAGSLDRAVRVW--DSETGFLVERLDSENESGTGHKDSVYSVV 263 (393)
T ss_dssp EEEEEEECSSCEEEEEECS------------TTCCEEEEEETTSCEEEE--ETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred eeEEEEEcCCCcEEEEEEC------------CCCCEEEEEcCCCcEEEE--ECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence 7654443322222223332 345566677777876666 6666653 3332 223456666
Q ss_pred eeeCCEEEEEEeCCCCCceEEEEEcCCC
Q 004816 404 TLGNDCLFVEGASGVEPSSVAKVTLDDH 431 (729)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~ly~~d~~~~ 431 (729)
..+++.+++.++.. ..+.++|+...
T Consensus 264 ~~~~g~~l~s~s~d---~~v~~wd~~~~ 288 (393)
T 1erj_A 264 FTRDGQSVVSGSLD---RSVKLWNLQNA 288 (393)
T ss_dssp ECTTSSEEEEEETT---SEEEEEEC---
T ss_pred ECCCCCEEEEEeCC---CEEEEEECCCC
Confidence 44455555555543 35667776654
No 341
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.81 E-value=2.6e-08 Score=103.53 Aligned_cols=196 Identities=12% Similarity=0.102 Sum_probs=109.3
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHH-HHHHHhCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSC-ATFLVGSGKADE 570 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~ 570 (729)
.|.|+++||.++. ...|..++..| ..+|.|+.+|++|.++ ... .. ..++++... ++.+.+.. ..
T Consensus 101 ~~~l~~lhg~~~~--~~~~~~l~~~L-~~~~~v~~~d~~g~~~---~~~--~~-----~~~~~~a~~~~~~i~~~~--~~ 165 (329)
T 3tej_A 101 GPTLFCFHPASGF--AWQFSVLSRYL-DPQWSIIGIQSPRPNG---PMQ--TA-----ANLDEVCEAHLATLLEQQ--PH 165 (329)
T ss_dssp SCEEEEECCTTSC--CGGGGGGGGTS-CTTCEEEEECCCTTTS---HHH--HC-----SSHHHHHHHHHHHHHHHC--SS
T ss_pred CCcEEEEeCCccc--chHHHHHHHhc-CCCCeEEEeeCCCCCC---CCC--CC-----CCHHHHHHHHHHHHHHhC--CC
Confidence 4679999997443 45566666666 5689999999997533 211 11 123333332 33333321 23
Q ss_pred CcEEEEEcChHHHHHHHHHh----CCCcceEEEEeccccChhHHhhhc-------c------hhhhhhhhhhcC--Chh-
Q 004816 571 KRLCITGGSAGGYTTLAALA----FRDTFKAGASLYGVADLSMLRAET-------H------KFESRYIDNLVG--SEK- 630 (729)
Q Consensus 571 ~ri~i~G~S~GG~~a~~~~~----~~~~~~a~v~~~~~~d~~~~~~~~-------~------~~~~~~~~~~~~--~~~- 630 (729)
+++.++|||+||.+++.++. ++++++.++++.+.......+... . .....+...... ..+
T Consensus 166 ~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (329)
T 3tej_A 166 GPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTEL 245 (329)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSCCHH
T ss_pred CCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccccccHHH
Confidence 68999999999999988774 789999999988765432211000 0 000000000000 000
Q ss_pred ------hhhhc-C--cccccCCCCCCEEEEEeCCCCCCChHHHHHHHHHHHhCCCCEEEEEECCCCcc-cCCcccHHHHH
Q 004816 631 ------DYYEK-S--PINFVDKFSCPIILFQGLEDKVVPPDQARKIYKALKENGLPVALVEYEGEQHG-FRKAENIKFTL 700 (729)
Q Consensus 631 ------~~~~~-s--p~~~~~~i~~PvL~i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~-~~~~~~~~~~~ 700 (729)
.+... . .......+.+|++++.|.+|..++......+.+.. .+++++.++ ++|. +..++......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~----~~~~~~~v~-g~H~~~~~~~~~~~ia 320 (329)
T 3tej_A 246 FTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI----AELDIYRQD-CAHVDIISPGTFEKIG 320 (329)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE----EEEEEEEES-SCGGGGGSTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhc----CCcEEEEec-CChHHhCCChHHHHHH
Confidence 01100 0 00113456789999999999877665443332222 367899998 4675 33444444455
Q ss_pred HHHHHHH
Q 004816 701 EQQMVFF 707 (729)
Q Consensus 701 ~~~~~fl 707 (729)
+.+.+|+
T Consensus 321 ~~l~~~L 327 (329)
T 3tej_A 321 PIIRATL 327 (329)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555554
No 342
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.81 E-value=9.2e-07 Score=99.90 Aligned_cols=285 Identities=7% Similarity=-0.030 Sum_probs=157.0
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCC-CCcccCCCCCcccccccccC-CceEEEEC--C-EEEEEECC
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGD-EPSDITPKEYAVRTTAQEYG-GGAFRIFG--D-TVIFSNYK 163 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g-~~~~l~~~~~~~~~~~~~~~-~~~~~~~~--~-~i~~~~~~ 163 (729)
.+..+.|+| ++.+++.. ++...+|........ +....+.. +... +.+..+++ + ..+++...
T Consensus 20 ~v~~~~~spdg~~l~~~~-----~~~v~v~~~~~~~~~~~~~~~~~~--------h~~~~v~~~~~sp~~~~~~l~s~~~ 86 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPC-----GKSAFVRCLDDGDSKVPPVVQFTG--------HGSSVVTTVKFSPIKGSQYLCSGDE 86 (615)
T ss_dssp CCCCCEEETTTTEEEEEE-----TTEEEEEECCSSCCSSCSEEEECT--------TTTSCEEEEEECSSTTCCEEEEEET
T ss_pred ceeEEEECCCCCEEEEec-----CCeEEEEECCCCCCccccceEEec--------CCCceEEEEEECcCCCCCEEEEecC
Confidence 567899999 77777754 356667765422000 11111111 1222 33444544 3 45555566
Q ss_pred CCcEEEEeCCCCCC------CC---eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE
Q 004816 164 DQRLYKHSIDSKDS------SP---LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (729)
Q Consensus 164 ~~~l~~~d~~~~~~------~~---~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~ 234 (729)
++.|.+|++.+ + .. ..+... ...+...+|+|||++|+....+... ...|++++. +....
T Consensus 87 dg~v~vw~~~~--~~~~~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~~~~~-----~~~v~~~d~-~~~~~ 154 (615)
T 1pgu_A 87 SGKVIVWGWTF--DKESNSVEVNVKSEFQVL----AGPISDISWDFEGRRLCVVGEGRDN-----FGVFISWDS-GNSLG 154 (615)
T ss_dssp TSEEEEEEEEE--EGGGTEEEEEEEEEEECC----SSCEEEEEECTTSSEEEEEECCSSC-----SEEEEETTT-CCEEE
T ss_pred CCEEEEEeCCC--Ccccccccccccchhhcc----cccEEEEEEeCCCCEEEEeccCCCC-----ccEEEEEEC-CCcce
Confidence 88899999864 3 11 222222 3456788999999998877654321 256887773 23344
Q ss_pred EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccc---cccCceeCCC-Cc
Q 004816 235 VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE---SPTEPKWSSK-GE 310 (729)
Q Consensus 235 ~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~---~~~~~~wspD-G~ 310 (729)
.+...........|+|||+.++++... ...|.++|+. +++. ...+.... . .+..+.|+|| |+
T Consensus 155 ~~~~~~~~v~~~~~~~~~~~~l~~~~~-------d~~v~vwd~~-~~~~--~~~~~~~~----~~~~~v~~~~~~~~~~~ 220 (615)
T 1pgu_A 155 EVSGHSQRINACHLKQSRPMRSMTVGD-------DGSVVFYQGP-PFKF--SASDRTHH----KQGSFVRDVEFSPDSGE 220 (615)
T ss_dssp ECCSCSSCEEEEEECSSSSCEEEEEET-------TTEEEEEETT-TBEE--EEEECSSS----CTTCCEEEEEECSTTCC
T ss_pred eeecCCccEEEEEECCCCCcEEEEEeC-------CCcEEEEeCC-Ccce--eeeecccC----CCCceEEEEEECCCCCC
Confidence 454455567788999999954444422 3458999987 5554 44455444 4 5678899999 88
Q ss_pred EEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCc
Q 004816 311 LFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 389 (729)
Q Consensus 311 l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~ 389 (729)
+++.... .+ .|.++|+.+++..... ........+. ..+.|. +++ ++++...++...+| ++.+++
T Consensus 221 ~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~~v-----~~~~~~----~~~-~l~~~~~d~~i~~w--d~~~~~ 285 (615)
T 1pgu_A 221 FVITVGS-DR--KISCFDGKSGEFLKYIEDDQEPVQGGI-----FALSWL----DSQ-KFATVGADATIRVW--DVTTSK 285 (615)
T ss_dssp EEEEEET-TC--CEEEEETTTCCEEEECCBTTBCCCSCE-----EEEEES----SSS-EEEEEETTSEEEEE--ETTTTE
T ss_pred EEEEEeC-CC--eEEEEECCCCCEeEEecccccccCCce-----EEEEEc----CCC-EEEEEcCCCcEEEE--ECCCCc
Confidence 5555444 33 4677788777655443 1000011111 123332 233 44555566665554 666665
Q ss_pred eE-eeccC----CcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 390 LS-LLDIP----FTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 390 ~~-~lt~~----~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
.. .+... ...+..+ .++++. ++..+.. ..++.+++..++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~---g~i~~~d~~~~~ 330 (615)
T 1pgu_A 286 CVQKWTLDKQQLGNQQVGVVATGNGR-IISLSLD---GTLNFYELGHDE 330 (615)
T ss_dssp EEEEEECCTTCGGGCEEEEEEEETTE-EEEEETT---SCEEEEETTEEE
T ss_pred EEEEEcCCCCcccCceeEEEeCCCCe-EEEEECC---CCEEEEECCCCc
Confidence 43 33333 1234444 444444 4444432 367777777654
No 343
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.80 E-value=3.6e-06 Score=88.26 Aligned_cols=269 Identities=10% Similarity=0.029 Sum_probs=151.5
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCC
Q 004816 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (729)
Q Consensus 88 ~~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~ 165 (729)
...+..+.|+| ++.+ .+.. .++...+|..... +....+... .....+..++++ ..+.+...++
T Consensus 64 ~~~V~~~~~s~d~~~l-~s~s---~Dg~v~vWd~~~~---~~~~~~~~~--------~~~v~~~~~sp~g~~lasg~~d~ 128 (354)
T 2pbi_B 64 GNKVLCMDWCKDKRRI-VSSS---QDGKVIVWDSFTT---NKEHAVTMP--------CTWVMACAYAPSGCAIACGGLDN 128 (354)
T ss_dssp SSCEEEEEECTTSSEE-EEEE---TTSEEEEEETTTC---CEEEEEECS--------SSCCCEEEECTTSSEEEEESTTS
T ss_pred CCeEEEEEECCCCCEE-EEEe---CCCeEEEEECCCC---CcceEEecC--------CCCEEEEEECCCCCEEEEeeCCC
Confidence 34567889999 5444 4433 4677777764332 211111111 111222333322 3455566778
Q ss_pred cEEEEeCCCCCCCC-------eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee
Q 004816 166 RLYKHSIDSKDSSP-------LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS 238 (729)
Q Consensus 166 ~l~~~d~~~~~~~~-------~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~ 238 (729)
.+.++++.. ... ..+... ...+....|+|+++.|+....+ ..|.++|+.+++......
T Consensus 129 ~i~v~~~~~--~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~t~s~D---------~~v~lwd~~~~~~~~~~~ 193 (354)
T 2pbi_B 129 KCSVYPLTF--DKNENMAAKKKSVAMH----TNYLSACSFTNSDMQILTASGD---------GTCALWDVESGQLLQSFH 193 (354)
T ss_dssp EEEEEECCC--CTTCCSGGGCEEEEEC----SSCEEEEEECSSSSEEEEEETT---------SEEEEEETTTCCEEEEEE
T ss_pred CEEEEEEec--cccccccccceeeecc----CCcEEEEEEeCCCCEEEEEeCC---------CcEEEEeCCCCeEEEEEc
Confidence 888888764 211 112112 2345678899999988766543 468899999887654433
Q ss_pred -CCCeeeeeeeCC--CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEE
Q 004816 239 -GSDFYAFPRMDP--RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVT 315 (729)
Q Consensus 239 -~~~~~~~~~~SP--DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~ 315 (729)
.........|+| +|+.|+..+. ...|.++|+. +++. ...+.... ..+..++|+|||+++++.
T Consensus 194 ~h~~~v~~~~~~~~~~g~~l~sgs~--------Dg~v~~wd~~-~~~~--~~~~~~h~----~~v~~v~~~p~~~~l~s~ 258 (354)
T 2pbi_B 194 GHGADVLCLDLAPSETGNTFVSGGC--------DKKAMVWDMR-SGQC--VQAFETHE----SDVNSVRYYPSGDAFASG 258 (354)
T ss_dssp CCSSCEEEEEECCCSSCCEEEEEET--------TSCEEEEETT-TCCE--EEEECCCS----SCEEEEEECTTSSEEEEE
T ss_pred CCCCCeEEEEEEeCCCCCEEEEEeC--------CCeEEEEECC-CCcE--EEEecCCC----CCeEEEEEeCCCCEEEEE
Confidence 333445566766 6787776552 2348999998 6764 44555554 566788999999955555
Q ss_pred ecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCc-eEeec
Q 004816 316 DRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS-LSLLD 394 (729)
Q Consensus 316 ~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~-~~~lt 394 (729)
.. .+. |.++|+.+++...+....... .....+.|.+ ++ .++++...++..+|| |+.+++ +..+.
T Consensus 259 s~-D~~--v~lwd~~~~~~~~~~~~~~~~------~~~~~~~~s~---~g-~~l~~g~~d~~i~vw--d~~~~~~~~~l~ 323 (354)
T 2pbi_B 259 SD-DAT--CRLYDLRADREVAIYSKESII------FGASSVDFSL---SG-RLLFAGYNDYTINVW--DVLKGSRVSILF 323 (354)
T ss_dssp ET-TSC--EEEEETTTTEEEEEECCTTCC------SCEEEEEECT---TS-SEEEEEETTSCEEEE--ETTTCSEEEEEC
T ss_pred eC-CCe--EEEEECCCCcEEEEEcCCCcc------cceeEEEEeC---CC-CEEEEEECCCcEEEE--ECCCCceEEEEE
Confidence 44 344 555677776554443221100 0112334442 44 455666667766666 665554 44555
Q ss_pred cCCcceEEe-eeeCCEEEEEEeC
Q 004816 395 IPFTDIDNI-TLGNDCLFVEGAS 416 (729)
Q Consensus 395 ~~~~~v~~~-~~~~~~~~~~~~~ 416 (729)
.....|..+ ..+++.+++.++.
T Consensus 324 ~h~~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 324 GHENRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp CCSSCEEEEEECTTSSCEEEEET
T ss_pred CCCCcEEEEEECCCCCEEEEEcC
Confidence 556667777 4445555555553
No 344
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.80 E-value=2.1e-09 Score=118.84 Aligned_cols=126 Identities=16% Similarity=0.121 Sum_probs=85.5
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccc-hhhhHHHhh-CCcEEEEecCCCC-CCCchhHHHhhccCCC
Q 004816 472 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWTS-RGWAFVDVNYGGS-TGYGREFRERLLGRWG 548 (729)
Q Consensus 472 l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~-~~~~~~la~-~G~~v~~~d~rGs-~g~g~~~~~~~~~~~~ 548 (729)
+...+|.|.. ..++.|+||++|||++....... ......|++ .|+.|+.+|||.. -|+..... .....+
T Consensus 93 l~lnv~~P~~------~~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~--~~~~~~ 164 (529)
T 1p0i_A 93 LYLNVWIPAP------KPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPG--NPEAPG 164 (529)
T ss_dssp CEEEEEEESS------CCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTT--CTTSCS
T ss_pred CeEEEeeCCC------CCCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCC--CCCCcC
Confidence 3445566754 12568999999998654333221 123456666 7999999999942 12111100 000112
Q ss_pred cccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHhC---CCcceEEEEecccc
Q 004816 549 IVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALAF---RDTFKAGASLYGVA 605 (729)
Q Consensus 549 ~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~---~~~~~a~v~~~~~~ 605 (729)
...+.|+..+++|+.++ ...|+++|.|+|+|+||.+++.++.. ...|+++|+.+|..
T Consensus 165 n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 165 NMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred cccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 23489999999999875 35699999999999999999888863 46899999999864
No 345
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.80 E-value=7.3e-09 Score=111.75 Aligned_cols=110 Identities=10% Similarity=-0.032 Sum_probs=79.0
Q ss_pred CCCEEEEEcCCCCCCccccchh-hhHHHhhC-CcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCC
Q 004816 491 KPPLLVKSHGGPTSEARGILNL-SIQYWTSR-GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKA 568 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~~-~~~~la~~-G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 568 (729)
..|+||++||..... ...|.. .+..|+++ ||.|+++|++|.+.... ..... .. ....+|+.+++++|.++..+
T Consensus 69 ~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~--~~~~~-~~-~~~~~dl~~~i~~L~~~~g~ 143 (452)
T 1w52_X 69 SRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSSGAKAEY--TQAVQ-NI-RIVGAETAYLIQQLLTELSY 143 (452)
T ss_dssp TSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCH--HHHHH-HH-HHHHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEeccccccccc--HHHHH-hH-HHHHHHHHHHHHHHHHhcCC
Confidence 458999999985543 233444 55667665 99999999997654331 11110 00 11257788888988765334
Q ss_pred CCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEecccc
Q 004816 569 DEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVA 605 (729)
Q Consensus 569 d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~ 605 (729)
+.+++.|+|||+||.+|+.++. +|+++++++++.|..
T Consensus 144 ~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 144 NPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 5689999999999999999998 999999999998754
No 346
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.79 E-value=2e-09 Score=119.14 Aligned_cols=128 Identities=20% Similarity=0.171 Sum_probs=87.1
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccc-hhhhHHHh-hCCcEEEEecCCCC-CCCchhHHHhhc
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWT-SRGWAFVDVNYGGS-TGYGREFRERLL 544 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~-~~~~~~la-~~G~~v~~~d~rGs-~g~g~~~~~~~~ 544 (729)
|...+ .+|.|.. ..++.|+||++|||++....... ......|+ +.|+.|+.+|||.. -|+..... ..
T Consensus 93 dcl~l--nv~~P~~------~~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~--~~ 162 (537)
T 1ea5_A 93 DCLYL--NIWVPSP------RPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHG--SQ 162 (537)
T ss_dssp CCCEE--EEEECSS------CCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTT--CS
T ss_pred cCCeE--EEeccCC------CCCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCC--CC
Confidence 55444 4566754 13568999999998754333221 12345666 78999999999942 11111000 00
Q ss_pred cCCCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHhC---CCcceEEEEecccc
Q 004816 545 GRWGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALAF---RDTFKAGASLYGVA 605 (729)
Q Consensus 545 ~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~---~~~~~a~v~~~~~~ 605 (729)
...+...+.|+.++++|+.++ ...|+++|.|+|+|+||.+++.++.. ...|+++|+.+|..
T Consensus 163 ~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 163 EAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp SSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred CCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 111223489999999999886 24699999999999999999888763 56899999999864
No 347
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.79 E-value=9.1e-07 Score=95.19 Aligned_cols=241 Identities=11% Similarity=0.004 Sum_probs=138.0
Q ss_pred CceEEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEE
Q 004816 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (729)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~ 226 (729)
...++|+.+.++.+. .++.|++||+.+ ++..++....+ ....+...+|||||++|+....+. .|.++
T Consensus 108 ~~~l~wS~~n~lAvg-ld~tV~lWd~~t--g~~~~~~~~~~-~~~~V~sv~fspdg~~lasgs~Dg---------~v~iW 174 (420)
T 4gga_A 108 LNLVDWSSGNVLAVA-LDNSVYLWSASS--GDILQLLQMEQ-PGEYISSVAWIKEGNYLAVGTSSA---------EVQLW 174 (420)
T ss_dssp CBCEEECTTSEEEEE-ETTEEEEEETTT--CCEEEEEECCS-TTCCEEEEEECTTSSEEEEEETTS---------CEEEE
T ss_pred ceeEEECCCCEEEEE-eCCEEEEEECCC--CCEEEEEEecC-CCCcEEEEEECCCCCEEEEEECCC---------eEEEE
Confidence 344666655444443 477899999998 76555432211 134578899999999877655432 35555
Q ss_pred EcCCCceEEee------------------------------------------eCCCeeeeeeeCCCCCeEEEEEecCCC
Q 004816 227 ALNGQNIQVLV------------------------------------------SGSDFYAFPRMDPRGERMAWIEWHHPN 264 (729)
Q Consensus 227 dl~~g~~~~lt------------------------------------------~~~~~~~~~~~SPDG~~la~~~~~~~~ 264 (729)
|+.+++..... ..........|+|+|+.|+....
T Consensus 175 d~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~---- 250 (420)
T 4gga_A 175 DVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN---- 250 (420)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET----
T ss_pred EcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeec----
Confidence 65554332111 11123345677888887765552
Q ss_pred CCCCCcEEEEEEecCCCCee--eeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEEeeccC
Q 004816 265 MPWDKAELWVGYISENGDVY--KRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLD 341 (729)
Q Consensus 265 ~~~~~~~l~~~d~~~~g~~~--~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~ 341 (729)
...+.++++. +++.. ......... ..+....|+|++. ++.+... .....|.++|..+++........
T Consensus 251 ----D~~v~i~~~~-~~~~~~~~~~~~~~~~----~~V~~~~~~p~~~~~la~~~g-s~D~~I~iwd~~t~~~~~~~~~~ 320 (420)
T 4gga_A 251 ----DNLVNVWPSA-PGEGGWVPLQTFTQHQ----GAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGACLSAVDAH 320 (420)
T ss_dssp ----TSCEEEEESS-CCSSCSCCSEEECCCS----SCEEEEEECTTCTTEEEEEEC-TTTCEEEEEETTTTEEEEEEECS
T ss_pred ----cccceEEeec-cccccceeeeeecccC----CceeeeeeCCCcccEEEEEee-cCCCEEEEEeCCccccceeeccc
Confidence 2337777776 44321 123333333 4566788999887 7665443 23356777899888766555333
Q ss_pred ccccCCcccccCcceeeeeecCCCCEEEEEEE-ECCeEEEEEEECCCCc-eEeeccCCcceEEe-eeeCCEEEEEEeCCC
Q 004816 342 AEFSRPLWVFGINSYEIIQSHGEKNLIACSYR-QNGRSYLGILDDFGHS-LSLLDIPFTDIDNI-TLGNDCLFVEGASGV 418 (729)
Q Consensus 342 ~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~-~~g~~~ly~~d~~~g~-~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~ 418 (729)
..+....|.+ +++.++..+. .++. |+++|..+++ +..+..+...|..+ ..+++.+++.++.+.
T Consensus 321 ~~v~~~~~~~------------~~~~lv~~sg~~d~~--I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~ 386 (420)
T 4gga_A 321 SQVCSILWSP------------HYKELISGHGFAQNQ--LVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADE 386 (420)
T ss_dssp SCEEEEEEET------------TTTEEEEEECTTTCC--EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTT
T ss_pred cceeeeeecC------------CCCeEEEEEecCCCE--EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 3333334443 6666665543 3454 5555766665 44566556678877 455556666665432
Q ss_pred CCceEEEEEcCCC
Q 004816 419 EPSSVAKVTLDDH 431 (729)
Q Consensus 419 ~~~~ly~~d~~~~ 431 (729)
.|.++++...
T Consensus 387 ---tvriWdv~~~ 396 (420)
T 4gga_A 387 ---TLRLWRCFEL 396 (420)
T ss_dssp ---EEEEECCSCS
T ss_pred ---eEEEEECCCC
Confidence 4555555443
No 348
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.78 E-value=2.2e-06 Score=89.33 Aligned_cols=148 Identities=14% Similarity=0.160 Sum_probs=92.4
Q ss_pred ceEEEECC-EEEEEECCCCcEEEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEE
Q 004816 148 GAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (729)
Q Consensus 148 ~~~~~~~~-~i~~~~~~~~~l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~ 225 (729)
.+..++++ .++++...++.|.+||+.+ ++. ..+... ...+...+|+|||+.|+....+ ..|.+
T Consensus 80 ~~~~~~~~~~~l~s~s~D~~v~lwd~~~--~~~~~~~~~h----~~~v~~v~~sp~~~~l~s~~~d---------~~i~~ 144 (343)
T 2xzm_R 80 SDLALSQENCFAISSSWDKTLRLWDLRT--GTTYKRFVGH----QSEVYSVAFSPDNRQILSAGAE---------REIKL 144 (343)
T ss_dssp EEEEECSSTTEEEEEETTSEEEEEETTS--SCEEEEEECC----CSCEEEEEECSSTTEEEEEETT---------SCEEE
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCC--CcEEEEEcCC----CCcEEEEEECCCCCEEEEEcCC---------CEEEE
Confidence 34444433 4566777788999999987 543 344433 3456788999999987766543 35888
Q ss_pred EEcCCCceEEee---eCCCeeeeeeeCCCC----------CeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCC
Q 004816 226 IALNGQNIQVLV---SGSDFYAFPRMDPRG----------ERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF 292 (729)
Q Consensus 226 ~dl~~g~~~~lt---~~~~~~~~~~~SPDG----------~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~ 292 (729)
+|+.+.....+. .........+|+|++ +.|+..+. ...|.++|.. +.. ...+.+.
T Consensus 145 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~--------d~~i~iwd~~--~~~--~~~~~~h 212 (343)
T 2xzm_R 145 WNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGW--------DGRLKVWNTN--FQI--RYTFKAH 212 (343)
T ss_dssp EESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEET--------TSEEEEEETT--TEE--EEEEECC
T ss_pred EeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcC--------CCEEEEEcCC--Cce--eEEEcCc
Confidence 898754333332 123345667899987 55655542 3458888843 332 3344455
Q ss_pred CCCccccccCceeCCCCcEEEEEecCCCceEEEEEEc
Q 004816 293 DPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIE 329 (729)
Q Consensus 293 ~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~ 329 (729)
. ..+..++|+|||++++.... .+ .|.++|+
T Consensus 213 ~----~~v~~~~~s~~g~~l~sgs~-dg--~v~iwd~ 242 (343)
T 2xzm_R 213 E----SNVNHLSISPNGKYIATGGK-DK--KLLIWDI 242 (343)
T ss_dssp S----SCEEEEEECTTSSEEEEEET-TC--EEEEEES
T ss_pred c----ccceEEEECCCCCEEEEEcC-CC--eEEEEEC
Confidence 4 56677899999995555444 34 4555666
No 349
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.78 E-value=1.1e-06 Score=95.04 Aligned_cols=171 Identities=10% Similarity=0.115 Sum_probs=95.3
Q ss_pred eeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCC-CceEEe--------eeCCCeeeeeeeCCCC-CeEEEEEe
Q 004816 191 VSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-QNIQVL--------VSGSDFYAFPRMDPRG-ERMAWIEW 260 (729)
Q Consensus 191 ~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~-g~~~~l--------t~~~~~~~~~~~SPDG-~~la~~~~ 260 (729)
..+...+|+|||+.|+.. . + ..|.++|+.. ++...+ ..........+|+||| +.|+..+.
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~-d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~ 247 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-D-D--------LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS 247 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-C-S--------SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET
T ss_pred cceEEEEEcCCCCEEEEe-C-C--------CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC
Confidence 445778899999987754 3 2 4688999983 333332 1233456778999999 77766552
Q ss_pred cCCCCCCCCcEEEEEEecCCCCee--eeEEecCCCCCccc------------cccCceeCCCCcEEEEEecCCCceEEEE
Q 004816 261 HHPNMPWDKAELWVGYISENGDVY--KRVCVAGFDPTIVE------------SPTEPKWSSKGELFFVTDRKNGFWNLHK 326 (729)
Q Consensus 261 ~~~~~~~~~~~l~~~d~~~~g~~~--~~~~~~~~~~~~~~------------~~~~~~wspDG~l~~~~~~~~g~~~l~~ 326 (729)
...|.++|+. +++.. ....+.... . .+..+.|+|||++++.... ..|.+
T Consensus 248 --------dg~i~iwd~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----~~v~i 310 (447)
T 3dw8_B 248 --------KGTIRLCDMR-ASALCDRHSKLFEEPE----DPSNRSFFSEIISSISDVKFSHSGRYMMTRDY----LSVKV 310 (447)
T ss_dssp --------TSCEEEEETT-TCSSSCTTCEEECCC---------CCHHHHHTTCEEEEEECTTSSEEEEEES----SEEEE
T ss_pred --------CCeEEEEECc-CCccccceeeEeccCC----CccccccccccCceEEEEEECCCCCEEEEeeC----CeEEE
Confidence 2348999988 55421 123444432 2 5677899999995444432 45677
Q ss_pred EEcCC-CeEEEeeccCccccCC-------cccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeec
Q 004816 327 WIESN-NEVLAIYSLDAEFSRP-------LWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLD 394 (729)
Q Consensus 327 ~d~~~-g~~~~l~~~~~~~~~~-------~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt 394 (729)
+|+.+ ++.............. .-......+.|.+ +++.| ++...+|...| +|+.+++...+.
T Consensus 311 wd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~---~~~~l-~s~s~dg~v~i--wd~~~~~~~~~~ 380 (447)
T 3dw8_B 311 WDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG---SDSVV-MTGSYNNFFRM--FDRNTKRDITLE 380 (447)
T ss_dssp EETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT---TSSEE-EEECSTTEEEE--EETTTCCEEEEE
T ss_pred EeCCCCccccceeeccccccccccccccccccccceEEEECC---CCCEE-EEeccCCEEEE--EEcCCCcceeee
Confidence 78765 4432222111110000 0000001134443 55544 56666775555 477777765443
No 350
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.78 E-value=1.2e-06 Score=100.98 Aligned_cols=242 Identities=14% Similarity=0.109 Sum_probs=138.1
Q ss_pred cCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcEE
Q 004816 91 LGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRLY 168 (729)
Q Consensus 91 ~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l~ 168 (729)
+.++.++| +..+..+.. .++...+|.....+ ...... ..+-.-|.....+..++.+ .++++...++.|.
T Consensus 385 V~~v~~~~~~~~~l~s~s---~D~~i~~W~~~~~~--~~~~~~----~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 385 VTAIATPIDNADIIVSAS---RDKSIILWKLTKDD--KAYGVA----QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEEECCTTCCSEEEEEE---TTSEEEEEECCCST--TCSCEE----EEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eEEEEecCCCCCEEEEEe---CCCcEEEEEccCCC--cccccc----cceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 44666776 556655554 45777788765431 110000 0000112223344445433 5566666788999
Q ss_pred EEeCCCCCCC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee----CCCee
Q 004816 169 KHSIDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS----GSDFY 243 (729)
Q Consensus 169 ~~d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~----~~~~~ 243 (729)
+||+.+ +. .+.+..+ ...+...+|||||+.|+....+ ..|.++|+.+.....+.. .....
T Consensus 456 vwd~~~--~~~~~~~~~h----~~~v~~~~~s~~~~~l~s~s~D---------~~i~iwd~~~~~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 456 LWDLAA--GVSTRRFVGH----TKDVLSVAFSLDNRQIVSASRD---------RTIKLWNTLGECKYTISEGGEGHRDWV 520 (694)
T ss_dssp EEETTT--TEEEEEEECC----SSCEEEEEECTTSSCEEEEETT---------SCEEEECTTSCEEEEECSSTTSCSSCE
T ss_pred EEECCC--CcceeEEeCC----CCCEEEEEEeCCCCEEEEEeCC---------CEEEEEECCCCcceeeccCCCCCCCcE
Confidence 999987 43 3444443 3457788999999987766553 357788887554444432 12345
Q ss_pred eeeeeCCCCC--eEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCc
Q 004816 244 AFPRMDPRGE--RMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGF 321 (729)
Q Consensus 244 ~~~~~SPDG~--~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~ 321 (729)
...+|+|++. .|+-.+ . ...|.++|+. +++. ...+.++. ..+..++|+|||+++++... .+.
T Consensus 521 ~~~~~~~~~~~~~l~s~s-~-------d~~v~vwd~~-~~~~--~~~~~~h~----~~v~~v~~spdg~~l~sg~~-Dg~ 584 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSAS-W-------DKTVKVWNLS-NCKL--RSTLAGHT----GYVSTVAVSPDGSLCASGGK-DGV 584 (694)
T ss_dssp EEEEECSCSSSCEEEEEE-T-------TSCEEEEETT-TCCE--EEEECCCS----SCEEEEEECTTSSEEEEEET-TSB
T ss_pred EEEEEeCCCCcceEEEEe-C-------CCeEEEEECC-CCcE--EEEEcCCC----CCEEEEEEeCCCCEEEEEeC-CCe
Confidence 6789999984 344333 2 2348899998 6654 44555555 56778899999995555544 344
Q ss_pred eEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce
Q 004816 322 WNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 390 (729)
Q Consensus 322 ~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~ 390 (729)
|.++|+.+++..........+ ..+.|.+ ++ .++.... ++. |.++|+.+++.
T Consensus 585 --i~iwd~~~~~~~~~~~~~~~v---------~~~~~sp---~~-~~l~~~~-~~~--i~iwd~~~~~~ 635 (694)
T 3dm0_A 585 --VLLWDLAEGKKLYSLEANSVI---------HALCFSP---NR-YWLCAAT-EHG--IKIWDLESKSI 635 (694)
T ss_dssp --CEEEETTTTEEEECCBCSSCE---------EEEEECS---SS-SEEEEEE-TTE--EEEEETTTTEE
T ss_pred --EEEEECCCCceEEEecCCCcE---------EEEEEcC---CC-cEEEEEc-CCC--EEEEECCCCCC
Confidence 555678777644332222112 2334442 44 3444443 443 55667777654
No 351
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=98.77 E-value=3.1e-08 Score=100.57 Aligned_cols=94 Identities=9% Similarity=0.004 Sum_probs=62.5
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
.|.||++||.+++ ...|..++..|. +.|+.+|+++... ...++++.+.+..++.... ..+
T Consensus 24 ~~~l~~~hg~~~~--~~~~~~~~~~L~---~~v~~~d~~~~~~--------------~~~~~~~a~~~~~~i~~~~-~~~ 83 (283)
T 3tjm_A 24 ERPLFLVHPIEGS--TTVFHSLASRLS---IPTYGLQCTRAAP--------------LDSIHSLAAYYIDCIRQVQ-PEG 83 (283)
T ss_dssp SCCEEEECCTTCC--SGGGHHHHHHCS---SCEEEECCCTTSC--------------CSCHHHHHHHHHHHHTTTC-CSS
T ss_pred CCeEEEECCCCCC--HHHHHHHHHhcC---ceEEEEecCCCCC--------------CCCHHHHHHHHHHHHHHhC-CCC
Confidence 4568899998443 455666777665 9999999964211 1224444433333333211 236
Q ss_pred cEEEEEcChHHHHHHHHHh-C---CCcce---EEEEecccc
Q 004816 572 RLCITGGSAGGYTTLAALA-F---RDTFK---AGASLYGVA 605 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~-~---~~~~~---a~v~~~~~~ 605 (729)
++.++||||||.+|+.++. . +++++ .++++.+..
T Consensus 84 ~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 84 PYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp CCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 8999999999999998886 3 78888 888887653
No 352
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.77 E-value=1.7e-06 Score=91.98 Aligned_cols=255 Identities=8% Similarity=0.010 Sum_probs=134.7
Q ss_pred CCEEEEEECCC----CcEEEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCC-CCCCcceEEEEEE
Q 004816 154 GDTVIFSNYKD----QRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ-DALNSTTEIVAIA 227 (729)
Q Consensus 154 ~~~i~~~~~~~----~~l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~-~~~~~~~~l~~~d 227 (729)
+..++..+... +.|.++|+.+ .+. ..+..+ ... .+.+||||++|+........ ........|.++|
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t--~~vv~~I~vG-----~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGST--GRILGMTDGG-----FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTT--TEEEEEEEEC-----SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCEEEEECCCcCCCCCeEEEEECCC--CEEEEEEECC-----CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence 34555555433 6899999987 433 333333 123 68899999986655321000 0000025699999
Q ss_pred cCCCceE-EeeeC-C------CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCC-------
Q 004816 228 LNGQNIQ-VLVSG-S------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF------- 292 (729)
Q Consensus 228 l~~g~~~-~lt~~-~------~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~------- 292 (729)
..++++. .+.-+ . ..-.+..+||||++|+...... ...|.++|+. +++......+.+.
T Consensus 156 ~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~------~~~VsVID~~-t~kvv~~I~v~g~~~~~p~g 228 (426)
T 3c75_H 156 PVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP------APAVGVVDLE-GKTFDRMLDVPDCYHIFPAS 228 (426)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS------SCEEEEEETT-TTEEEEEEECCSEEEEEEEE
T ss_pred CCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC------CCeEEEEECC-CCeEEEEEEcCCceeeccCC
Confidence 9998764 34322 1 1234679999999987765321 2458888887 5554221111100
Q ss_pred ---------CCCc---------c-------------ccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEEeecc
Q 004816 293 ---------DPTI---------V-------------ESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSL 340 (729)
Q Consensus 293 ---------~~~~---------~-------------~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~ 340 (729)
+..+ . .....+.+++||+ ++|.... ..++++|..++..+.+...
T Consensus 229 ~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~----g~V~ViD~~~~~~~v~~~~ 304 (426)
T 3c75_H 229 PTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYT----GKIFQADLTAEGATFRAPI 304 (426)
T ss_dssp TTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTT----SEEEEEEECSSCEEECCCE
T ss_pred CcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCC----CcEEEEeccCCceEEeeee
Confidence 0000 0 0001223466665 5554422 2577777766554433211
Q ss_pred C---ccccCCcccccC-cceeeeeecCCCCEEEEEEEEC-------CeEEEEEEECCCCceE-eeccCCcceEEe--eee
Q 004816 341 D---AEFSRPLWVFGI-NSYEIIQSHGEKNLIACSYRQN-------GRSYLGILDDFGHSLS-LLDIPFTDIDNI--TLG 406 (729)
Q Consensus 341 ~---~~~~~~~w~~~~-~~~~~l~~~~~~~~l~~~s~~~-------g~~~ly~~d~~~g~~~-~lt~~~~~v~~~--~~~ 406 (729)
. .......|.+.. ..+.+.+ +++++|+..... +...|.++|+++.++. .|..+.. ...+ +.+
T Consensus 305 ~~~~~~~i~~g~~p~g~~~va~s~---dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~-P~gia~spD 380 (426)
T 3c75_H 305 EALTEAERADDWRPGGWQQTAYHR---QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE-IDSINVSQD 380 (426)
T ss_dssp ESSCTTTGGGTEEECSSSCEEEEG---GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE-ECEEEECCS
T ss_pred eeccccccccccccCCceeeEEcC---CCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC-cCeEEEccC
Confidence 0 000012233321 2345544 677888776432 3568999999988753 4433321 2222 455
Q ss_pred CCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 407 NDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 407 ~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
++..+|..... ...+..+|+++++.
T Consensus 381 g~~~lyv~n~~--s~~VsVID~~t~kv 405 (426)
T 3c75_H 381 AEPLLYALSAG--TQTLHIYDAATGEE 405 (426)
T ss_dssp SSCEEEEEETT--TTEEEEEETTTCCE
T ss_pred CCEEEEEEcCC--CCeEEEEECCCCCE
Confidence 55355555422 35799999988875
No 353
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.76 E-value=8.3e-08 Score=101.44 Aligned_cols=216 Identities=9% Similarity=0.036 Sum_probs=117.2
Q ss_pred EEEEECCCCcEEEEeCCCCCCCCe---ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc-
Q 004816 157 VIFSNYKDQRLYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN- 232 (729)
Q Consensus 157 i~~~~~~~~~l~~~d~~~~~~~~~---~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~- 232 (729)
++++...++.|.+|++.+ +..+ .+... ...+..++|+|||++|+....+ ..|.++|+.+++
T Consensus 25 ~l~~~~~d~~i~iw~~~~--~~~~~~~~~~~h----~~~v~~~~~s~~~~~l~s~s~d---------~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 25 EFVTTTATNQVELYEQDG--NGWKHARTFSDH----DKIVTCVDWAPKSNRIVTCSQD---------RNAYVYEKRPDGT 89 (377)
T ss_dssp EEECCCSSSCBCEEEEET--TEEEECCCBCCC----SSCEEEEEECTTTCCEEEEETT---------SSEEEC------C
T ss_pred EEEEecCCCEEEEEEccC--CceEEEEEEecC----CceEEEEEEeCCCCEEEEEeCC---------CeEEEEEcCCCCc
Confidence 344444677888888876 5212 23322 3557888999999987766543 358888888776
Q ss_pred ---eEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe-eeeEEecC-CCCCccccccCceeCC
Q 004816 233 ---IQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YKRVCVAG-FDPTIVESPTEPKWSS 307 (729)
Q Consensus 233 ---~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~-~~~~~~~~-~~~~~~~~~~~~~wsp 307 (729)
...+..........+|+|||+.|+..+.+ ..|.++|+. +++. .....+.. .. ..+..+.|+|
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~-~~~~~~~~~~~~~~h~----~~v~~~~~~~ 156 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA--------RVISVCYFE-QENDWWVSKHLKRPLR----STILSLDWHP 156 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEESS--------SCEEECCC------CCCCEEECSSCC----SCEEEEEECT
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEecC--------CeEEEEEEC-CcccceeeeEeecccC----CCeEEEEEcC
Confidence 33444455567788999999999877632 348888887 4431 11334444 44 5667889999
Q ss_pred CCcEEEEEecCCCceEEEEEEcCCCe---------------EEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEE
Q 004816 308 KGELFFVTDRKNGFWNLHKWIESNNE---------------VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSY 372 (729)
Q Consensus 308 DG~l~~~~~~~~g~~~l~~~d~~~g~---------------~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s 372 (729)
||++++.... .+.-.+ +|+..++ ...+...- ....+ ...+.|.+ +++ ++++.
T Consensus 157 ~~~~l~~~~~-d~~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----v~~~~~sp---~~~-~l~~~ 223 (377)
T 3dwl_C 157 NNVLLAAGCA-DRKAYV--LSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGW-----VHAVGFSP---SGN-ALAYA 223 (377)
T ss_dssp TSSEEEEEES-SSCEEE--EEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSS-----EEEEEECT---TSS-CEEEE
T ss_pred CCCEEEEEeC-CCEEEE--EEEEecccCCCccccccccccchhhhhhcc-cCCce-----EEEEEECC---CCC-EEEEE
Confidence 9994444444 354444 4543221 01111000 00011 12344442 554 45556
Q ss_pred EECCeEEEEEEECCCCc-----eEeeccCCcceEEe-eeeCCEEEEEEe
Q 004816 373 RQNGRSYLGILDDFGHS-----LSLLDIPFTDIDNI-TLGNDCLFVEGA 415 (729)
Q Consensus 373 ~~~g~~~ly~~d~~~g~-----~~~lt~~~~~v~~~-~~~~~~~~~~~~ 415 (729)
..+|...||-+ .+++ ...+......+..+ ..+++.+++.++
T Consensus 224 ~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 224 GHDSSVTIAYP--SAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp ETTTEEC-CEE--CSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEES
T ss_pred eCCCcEEEEEC--CCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEc
Confidence 66787666655 4444 34444555567777 555666665553
No 354
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.76 E-value=1.8e-08 Score=102.20 Aligned_cols=101 Identities=14% Similarity=-0.002 Sum_probs=73.6
Q ss_pred CCCCEEEEEcCCCCCCc---cccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCC
Q 004816 490 EKPPLLVKSHGGPTSEA---RGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG 566 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~---~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 566 (729)
+..|.||++||..+... ...|....+.|.++||.|+.+|++|.+. .. ...+++.+.++.+++.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~---s~----------~~~~~~~~~i~~~~~~- 70 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDT---SE----------VRGEQLLQQVEEIVAL- 70 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSC---HH----------HHHHHHHHHHHHHHHH-
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCC---ch----------hhHHHHHHHHHHHHHH-
Confidence 34577999999755432 3467778889999999999999996543 21 1123444444444333
Q ss_pred CCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEecccc
Q 004816 567 KADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVA 605 (729)
Q Consensus 567 ~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~ 605 (729)
.+.+++.++|||+||.++..++. +|++++++|++++..
T Consensus 71 -~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 -SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp -HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred -hCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 13468999999999999999988 899999999998854
No 355
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.75 E-value=9.5e-07 Score=92.38 Aligned_cols=160 Identities=11% Similarity=0.012 Sum_probs=97.0
Q ss_pred CccCceEEcC----CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCc--eEEEEC---CEEEE
Q 004816 89 KRLGGTAVDG----HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGG--AFRIFG---DTVIF 159 (729)
Q Consensus 89 ~~~~~~~~~p----g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~--~~~~~~---~~i~~ 159 (729)
..+..+.|+| ++..++... ..++..+|....+ +..+.+... ....+..... .|+++. +.+++
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~---~~~~v~vw~~~~~--~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~l~ 89 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATV---GSNRVTLYECHSQ--GEIRLLQSY----VDADADENFYTCAWTYDSNTSHPLLA 89 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEE---ETTEEEEEEECGG--GCEEEEEEE----ECSCTTCCEEEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCCCceEEEEC---CCCEEEEEEcCCC--cEEEeeeec----cccCCCCcEEEEEeccCCCCCCCEEE
Confidence 3567888887 344444443 2346677776533 121222100 0000111122 344442 35677
Q ss_pred EECCCCcEEEEeCCCCCCCC-eecCCCCCCCceeeecceecC-CCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEee
Q 004816 160 SNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLV 237 (729)
Q Consensus 160 ~~~~~~~l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SP-dG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt 237 (729)
+...++.|.+|++.+ ++. ..+... ...+...+|+| +++.|+....+ ..|+++|+.+++.....
T Consensus 90 ~~~~dg~i~v~d~~~--~~~~~~~~~~----~~~i~~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 90 VAGSRGIIRIINPIT--MQCIKHYVGH----GNAINELKFHPRDPNLLLSVSKD---------HALRLWNIQTDTLVAIF 154 (366)
T ss_dssp EEETTCEEEEECTTT--CCEEEEEESC----CSCEEEEEECSSCTTEEEEEETT---------SCEEEEETTTTEEEEEE
T ss_pred EecCCCEEEEEEchh--ceEeeeecCC----CCcEEEEEECCCCCCEEEEEeCC---------CeEEEEEeecCeEEEEe
Confidence 777788999999987 543 334333 35578889999 88877665543 46899999988765543
Q ss_pred ----eCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCC
Q 004816 238 ----SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENG 281 (729)
Q Consensus 238 ----~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g 281 (729)
..........|+|||+.|+.... ...|.++|+. ++
T Consensus 155 ~~~~~~~~~v~~~~~~~~~~~l~~~~~--------dg~i~i~d~~-~~ 193 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDLLGEKIMSCGM--------DHSLKLWRIN-SK 193 (366)
T ss_dssp CSTTSCSSCEEEEEECTTSSEEEEEET--------TSCEEEEESC-SH
T ss_pred cccccccCceeEEEECCCCCEEEEecC--------CCCEEEEECC-CC
Confidence 33456678899999998886662 2348888887 44
No 356
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.75 E-value=7.9e-07 Score=96.05 Aligned_cols=250 Identities=10% Similarity=0.096 Sum_probs=143.6
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcc--cccccccCCceEEEECC--EEEEEEC
Q 004816 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAV--RTTAQEYGGGAFRIFGD--TVIFSNY 162 (729)
Q Consensus 88 ~~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~--~i~~~~~ 162 (729)
...+..++|+| ++.++.+.. .+|...+|....... .. .. ...... .-..+...+.++.++.+ .++++..
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~---~dg~V~vwd~~~~~~-~~-~~-~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKT---PSSDVLVFDYTKHPS-KP-EP-SGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEEC---SSSCEEEEEGGGSCS-SC-CT-TCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred CCcEEEEEECCCCCcEEEEEC---CCCcEEEEECCCccc-cc-Cc-cccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 45677899998 566666654 457778887754200 00 00 000000 00112223445555533 3677777
Q ss_pred CCCcEEEEeCCCCCCC-------CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc---
Q 004816 163 KDQRLYKHSIDSKDSS-------PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN--- 232 (729)
Q Consensus 163 ~~~~l~~~d~~~~~~~-------~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~--- 232 (729)
.++.|.+|++..+ +. ...+... ...+.+.+|+|++..++++.... ..|+++|+.++.
T Consensus 202 ~dg~i~vwd~~~~-~~~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~l~s~~~d--------g~i~i~d~~~~~~~~ 268 (430)
T 2xyi_A 202 DDHTICLWDINAT-PKEHRVIDAKNIFTGH----TAVVEDVAWHLLHESLFGSVADD--------QKLMIWDTRNNNTSK 268 (430)
T ss_dssp TTSCEEEEETTSC-CBGGGEEECSEEECCC----SSCEEEEEECSSCTTEEEEEETT--------SEEEEEETTCSCSSS
T ss_pred CCCeEEEEeCCCC-CCCCceeccceeecCC----CCCEeeeEEeCCCCCEEEEEeCC--------CeEEEEECCCCCCCc
Confidence 7889999999761 11 1222222 34567889999555555554433 579999998762
Q ss_pred -eEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-
Q 004816 233 -IQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE- 310 (729)
Q Consensus 233 -~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~- 310 (729)
...+..........+|+|+|+.++++... ...|.++|+. ... ..+..+.... ..+..+.|+|+|+
T Consensus 269 ~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~-------dg~v~vwd~~-~~~-~~~~~~~~h~----~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 269 PSHTVDAHTAEVNCLSFNPYSEFILATGSA-------DKTVALWDLR-NLK-LKLHSFESHK----DEIFQVQWSPHNET 335 (430)
T ss_dssp CSEEEECCSSCEEEEEECSSCTTEEEEEET-------TSEEEEEETT-CTT-SCSEEEECCS----SCEEEEEECSSCTT
T ss_pred ceeEeecCCCCeEEEEeCCCCCCEEEEEeC-------CCeEEEEeCC-CCC-CCeEEeecCC----CCEEEEEECCCCCC
Confidence 33443444566788999999976655532 3459999987 432 1244455454 5677899999998
Q ss_pred EEEEEecCCCceEEEEEEcCCCe------------EEEee---ccCccccCCcccccCcceeeeeecCCCCEEEEEEEEC
Q 004816 311 LFFVTDRKNGFWNLHKWIESNNE------------VLAIY---SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 375 (729)
Q Consensus 311 l~~~~~~~~g~~~l~~~d~~~g~------------~~~l~---~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~ 375 (729)
+++.... .+.-.| +|+.... ...+. .....+. .+.|.+ ++..++++...+
T Consensus 336 ~l~s~~~-d~~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~---------~~~~~p---~~~~~l~s~s~d 400 (430)
T 2xyi_A 336 ILASSGT-DRRLHV--WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS---------DFSWNP---NEPWIICSVSED 400 (430)
T ss_dssp EEEEEET-TSCCEE--EEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEE---------EEEECS---SSTTEEEEEETT
T ss_pred EEEEEeC-CCcEEE--EeCCCCccccCccccccCCcceEEEcCCCCCCce---------EEEECC---CCCCEEEEEECC
Confidence 7766655 454444 4554411 01111 1111222 334443 555577777788
Q ss_pred CeEEEEEEE
Q 004816 376 GRSYLGILD 384 (729)
Q Consensus 376 g~~~ly~~d 384 (729)
|..+||.++
T Consensus 401 g~i~iw~~~ 409 (430)
T 2xyi_A 401 NIMQVWQMA 409 (430)
T ss_dssp SEEEEEEEC
T ss_pred CCEEEeEcc
Confidence 888888764
No 357
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.75 E-value=2.6e-08 Score=102.49 Aligned_cols=104 Identities=13% Similarity=0.056 Sum_probs=75.8
Q ss_pred CCCCEEEEEcCCCCCCcc----ccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhC
Q 004816 490 EKPPLLVKSHGGPTSEAR----GILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGS 565 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~~----~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 565 (729)
+..|.||++||..+.... ..|....+.|.++||.|+++|++|.+..... ....+++.+.++.+++.
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~----------~~~~~~l~~~i~~~l~~ 75 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGP----------NGRGEQLLAYVKTVLAA 75 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSST----------TSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC----------CCCHHHHHHHHHHHHHH
Confidence 345779999997544321 4567788999999999999999976543211 11234455555544443
Q ss_pred CCCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEecccc
Q 004816 566 GKADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVA 605 (729)
Q Consensus 566 ~~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~ 605 (729)
.+.+++.|+|||+||.++..++. +|++++++|++++..
T Consensus 76 --~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 76 --TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp --HCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred --hCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 23468999999999999999988 899999999998854
No 358
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.75 E-value=5.7e-07 Score=101.64 Aligned_cols=202 Identities=9% Similarity=0.071 Sum_probs=126.9
Q ss_pred eeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCC----ce-EEeeeCCCe-eeeeeeCC--CCCeEEEEEecC
Q 004816 191 VSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ----NI-QVLVSGSDF-YAFPRMDP--RGERMAWIEWHH 262 (729)
Q Consensus 191 ~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g----~~-~~lt~~~~~-~~~~~~SP--DG~~la~~~~~~ 262 (729)
..+...+|||||++|++..+ ..|.+++++++ +. ..+...... ....+||| ||++|+..+.
T Consensus 19 ~~v~~~~~spdg~~l~~~~~----------~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~-- 86 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCG----------KSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE-- 86 (615)
T ss_dssp TCCCCCEEETTTTEEEEEET----------TEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET--
T ss_pred CceeEEEECCCCCEEEEecC----------CeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecC--
Confidence 34577899999999888763 35888899877 44 455545556 78899999 9999887662
Q ss_pred CCCCCCCcEEEEEEecCCC------CeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEE
Q 004816 263 PNMPWDKAELWVGYISENG------DVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVL 335 (729)
Q Consensus 263 ~~~~~~~~~l~~~d~~~~g------~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~ 335 (729)
...|.++|+. ++ +......+.... ..+..+.|+|||+ ++...........|+.+| .+....
T Consensus 87 ------dg~v~vw~~~-~~~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~ 154 (615)
T 1pgu_A 87 ------SGKVIVWGWT-FDKESNSVEVNVKSEFQVLA----GPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLG 154 (615)
T ss_dssp ------TSEEEEEEEE-EEGGGTEEEEEEEEEEECCS----SCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEE
T ss_pred ------CCEEEEEeCC-CCcccccccccccchhhccc----ccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcce
Confidence 3458888886 44 222233444444 5677889999999 665554423346788877 233333
Q ss_pred EeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceE-eeccCCc---ceEEe-eeeC-CE
Q 004816 336 AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFT---DIDNI-TLGN-DC 409 (729)
Q Consensus 336 ~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~-~lt~~~~---~v~~~-~~~~-~~ 409 (729)
.+......+.. +.|.+ +++.++++...++...+| +..+++.. .+..... .+..+ ..++ +.
T Consensus 155 ~~~~~~~~v~~---------~~~~~---~~~~~l~~~~~d~~v~vw--d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 220 (615)
T 1pgu_A 155 EVSGHSQRINA---------CHLKQ---SRPMRSMTVGDDGSVVFY--QGPPFKFSASDRTHHKQGSFVRDVEFSPDSGE 220 (615)
T ss_dssp ECCSCSSCEEE---------EEECS---SSSCEEEEEETTTEEEEE--ETTTBEEEEEECSSSCTTCCEEEEEECSTTCC
T ss_pred eeecCCccEEE---------EEECC---CCCcEEEEEeCCCcEEEE--eCCCcceeeeecccCCCCceEEEEEECCCCCC
Confidence 33333322222 34443 555566777777766665 66665543 4444444 57776 4444 55
Q ss_pred EEEEEeCCCCCceEEEEEcCCCcc
Q 004816 410 LFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 410 ~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+++..+.. ..++++|+.+++.
T Consensus 221 ~l~~~~~d---g~i~vwd~~~~~~ 241 (615)
T 1pgu_A 221 FVITVGSD---RKISCFDGKSGEF 241 (615)
T ss_dssp EEEEEETT---CCEEEEETTTCCE
T ss_pred EEEEEeCC---CeEEEEECCCCCE
Confidence 66655543 3678888877763
No 359
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.74 E-value=1.3e-08 Score=113.73 Aligned_cols=117 Identities=19% Similarity=0.181 Sum_probs=79.8
Q ss_pred CCCCCEEEEEcCCCCCCccccc-hhhhHHHhh-CCcEEEEecCCC-CCCCch---hHHH-hhccCCCcccHHHHHHHHHH
Q 004816 489 EEKPPLLVKSHGGPTSEARGIL-NLSIQYWTS-RGWAFVDVNYGG-STGYGR---EFRE-RLLGRWGIVDVNDCCSCATF 561 (729)
Q Consensus 489 ~~~~P~vv~~hGg~~~~~~~~~-~~~~~~la~-~G~~v~~~d~rG-s~g~g~---~~~~-~~~~~~~~~~~~D~~~~~~~ 561 (729)
.++.|+||++|||++....... ......|++ .|+.|+.+|||- .-|+.. .+.. ......+...+.|+..+++|
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~w 217 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 217 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHH
Confidence 4568999999998754333321 122355665 699999999993 222211 0000 00111223348999999999
Q ss_pred HHhCC---CCCCCcEEEEEcChHHHHHHHHHhC---CCcceEEEEecccc
Q 004816 562 LVGSG---KADEKRLCITGGSAGGYTTLAALAF---RDTFKAGASLYGVA 605 (729)
Q Consensus 562 l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~---~~~~~a~v~~~~~~ 605 (729)
+.++- ..|+++|.|+|+|+||+++..++.. ..+|+++|+.+|..
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 98862 4689999999999999999877763 46899999998854
No 360
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.74 E-value=6e-07 Score=93.88 Aligned_cols=203 Identities=10% Similarity=0.109 Sum_probs=128.6
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcE
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 167 (729)
..+.++.|++ ++.+||++.. .+ .|++.+.+++ ..+.+...+ +....+.++.+.++.|+|.+...+.|
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~---~~--~I~r~~~~g~-~~~~~~~~~------~~~p~glavd~~~g~ly~~d~~~~~I 140 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVT---LD--RILRANLNGS-NVEEVVSTG------LESPGGLAVDWVHDKLYWTDSGTSRI 140 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TT--EEEEEETTSC-SCEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEEeccccEEEEEecc---CC--ceEEEecCCC-CceEEEeCC------CCCccEEEEecCCCeEEEEcCCCCeE
Confidence 4577899998 9999999863 23 4777776632 333333222 11122333444467899998878899
Q ss_pred EEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee-CCCeeeee
Q 004816 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS-GSDFYAFP 246 (729)
Q Consensus 168 ~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~-~~~~~~~~ 246 (729)
+++++++ ...+.+.... .....+.+++|++..|+++.... ...|+++++++...+.+.. +...-.+.
T Consensus 141 ~~~~~dG--~~~~~l~~~~---l~~P~~iavdp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~~~~~~~PnGl 208 (349)
T 3v64_C 141 EVANLDG--AHRKVLLWQS---LEKPRAIALHPMEGTIYWTDWGN-------TPRIEASSMDGSGRRIIADTHLFWPNGL 208 (349)
T ss_dssp EEEETTS--CSCEEEECTT---CSCEEEEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEESCCSSCSCEEEE
T ss_pred EEEcCCC--CceEEEEeCC---CCCcceEEEecCcCeEEEeccCC-------CCEEEEEeCCCCCcEEEEECCCCCcceE
Confidence 9999986 5555554321 23347788999988877775432 2579999999876666643 44456788
Q ss_pred eeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEE
Q 004816 247 RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHK 326 (729)
Q Consensus 247 ~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~ 326 (729)
+|+|++++|+|+... ...|++++++ +... ..+..... .....++. .++.+|++ +. +...|.+
T Consensus 209 a~d~~~~~lY~aD~~-------~~~I~~~~~d-G~~~--~~~~~~~~----~~P~giav-~~~~ly~t-d~--~~~~V~~ 270 (349)
T 3v64_C 209 TIDYAGRRMYWVDAK-------HHVIERANLD-GSHR--KAVISQGL----PHPFAITV-FEDSLYWT-DW--HTKSINS 270 (349)
T ss_dssp EEETTTTEEEEEETT-------TTEEEEEETT-SCSC--EEEECSSC----SSEEEEEE-ETTEEEEE-ET--TTTEEEE
T ss_pred EEeCCCCEEEEEECC-------CCEEEEEeCC-CCce--EEEEeCCC----CCceEEEE-ECCEEEEe-cC--CCCeEEE
Confidence 999999999988732 3569999987 3322 22332222 33345555 23335554 43 4467888
Q ss_pred EEcCCCe
Q 004816 327 WIESNNE 333 (729)
Q Consensus 327 ~d~~~g~ 333 (729)
++..+|+
T Consensus 271 ~~~~~G~ 277 (349)
T 3v64_C 271 ANKFTGK 277 (349)
T ss_dssp EETTTCC
T ss_pred EEccCCC
Confidence 8854544
No 361
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.73 E-value=3.6e-07 Score=94.13 Aligned_cols=204 Identities=11% Similarity=0.112 Sum_probs=127.8
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEE
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~ 168 (729)
.+.++.|++ ++.+||++... + .|++.+.+++.....++... +....+.++.+.++.|++.+...+.|+
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~---~--~I~r~~~~g~~~~~~~~~~~------l~~p~glavd~~~g~ly~~d~~~~~I~ 104 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSE---E--AIKRTEFNKTESVQNVVVSG------LLSPDGLACDWLGEKLYWTDSETNRIE 104 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTT---T--EEEEEETTSSSCCCEEEEEC------CSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred ccEEEEEEeCCCEEEEEECCC---C--cEEEEEccCCCceEEEEcCC------CCCccEEEEEcCCCeEEEEECCCCEEE
Confidence 455788999 89999998632 3 47777666221112222111 112223344444778999988788999
Q ss_pred EEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEee-eCCCeeeeee
Q 004816 169 KHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLV-SGSDFYAFPR 247 (729)
Q Consensus 169 ~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt-~~~~~~~~~~ 247 (729)
++++++ ...+.+.... .....+.+++|++.+|+++.... ...|+++++++...+.+. .+...-++.+
T Consensus 105 ~~~~dG--~~~~~l~~~~---~~~P~giavdp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~~~~l~~Pngla 172 (318)
T 3sov_A 105 VSNLDG--SLRKVLFWQE---LDQPRAIALDPSSGFMYWTDWGE-------VPKIERAGMDGSSRFIIINSEIYWPNGLT 172 (318)
T ss_dssp EEETTS--CSCEEEECSS---CSSEEEEEEEGGGTEEEEEECSS-------SCEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEECCC--CcEEEEEeCC---CCCccEEEEeCCCCEEEEEecCC-------CCEEEEEEcCCCCeEEEEECCCCCccEEE
Confidence 999986 5555554321 23347788999888877764321 257999999976666654 3444567889
Q ss_pred eCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEE
Q 004816 248 MDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKW 327 (729)
Q Consensus 248 ~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~ 327 (729)
|+|++++|+|+.. ....|++++++ +... ..+..+.. .....++... +.+||+ +. +...|+++
T Consensus 173 vd~~~~~lY~aD~-------~~~~I~~~d~d-G~~~--~~~~~~~~----~~P~glav~~-~~lywt-d~--~~~~V~~~ 234 (318)
T 3sov_A 173 LDYEEQKLYWADA-------KLNFIHKSNLD-GTNR--QAVVKGSL----PHPFALTLFE-DILYWT-DW--STHSILAC 234 (318)
T ss_dssp EETTTTEEEEEET-------TTTEEEEEETT-SCSC--EEEECSCC----SCEEEEEEET-TEEEEE-ET--TTTEEEEE
T ss_pred EeccCCEEEEEEC-------CCCEEEEEcCC-CCce--EEEecCCC----CCceEEEEeC-CEEEEE-ec--CCCeEEEE
Confidence 9999999999873 23569999987 3332 22333221 2333444432 236666 44 45689999
Q ss_pred EcCCCeE
Q 004816 328 IESNNEV 334 (729)
Q Consensus 328 d~~~g~~ 334 (729)
+..+|+.
T Consensus 235 ~~~~G~~ 241 (318)
T 3sov_A 235 NKYTGEG 241 (318)
T ss_dssp ETTTCCS
T ss_pred ECCCCCc
Confidence 9866653
No 362
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.73 E-value=2.4e-06 Score=90.66 Aligned_cols=229 Identities=14% Similarity=0.077 Sum_probs=143.0
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV 235 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~ 235 (729)
.++|.. ...|+++++++ +....+... ......+.|+++++.|+++... ...|++++++++..+.
T Consensus 89 ~l~~~~--~~~I~~i~~~~--~~~~~~~~~----~~~~~gl~~d~~~~~ly~~D~~--------~~~I~r~~~~g~~~~~ 152 (386)
T 3v65_B 89 VLLFAN--RIDIRQVLPHR--SEYTLLLNN----LENAIALDFHHRRELVFWSDVT--------LDRILRANLNGSNVEE 152 (386)
T ss_dssp EEEEEC--BSCEEEECTTS--CCCEEEECS----CSCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCCEEE
T ss_pred eeEeec--CccceeeccCC--CcEEEEecC----CCccEEEEEecCCCeEEEEeCC--------CCcEEEEecCCCCcEE
Confidence 455553 35699999987 666665544 2345778899988887766432 2579999999887666
Q ss_pred eee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEE
Q 004816 236 LVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFF 313 (729)
Q Consensus 236 lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~ 313 (729)
+.. +.....+.++++.++.|+|+... ...|++++++ |... ..+....- .....++..|++. |||
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~-------~~~I~~~~~d--g~~~-~~l~~~~l----~~P~giavdp~~g~ly~ 218 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSG-------TSRIEVANLD--GAHR-KVLLWQSL----EKPRAIALHPMEGTIYW 218 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETT-------TTEEEECBTT--SCSC-EEEECSSC----SCEEEEEEETTTTEEEE
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCC-------CCeEEEEeCC--CCce-EEeecCCC----CCCcEEEEEcCCCeEEE
Confidence 543 33445678899988999988742 3468998876 3322 22333221 3345678888766 555
Q ss_pred EEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEee
Q 004816 314 VTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 393 (729)
Q Consensus 314 ~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~l 393 (729)
+ +. .....|+++++++...+.+.... ..| .+.+.+.+ +++.|||+-. +...|++++++++..+.+
T Consensus 219 t-d~-~~~~~I~r~~~dG~~~~~~~~~~-----~~~---PnGlavd~---~~~~lY~aD~--~~~~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 219 T-DW-GNTPRIEASSMDGSGRRIIADTH-----LFW---PNGLTIDY---AGRRMYWVDA--KHHVIERANLDGSHRKAV 283 (386)
T ss_dssp E-EC-SSSCEEEEEETTSCSCEEEECSS-----CSC---EEEEEEEG---GGTEEEEEET--TTTEEEEECTTSCSCEEE
T ss_pred e-cc-CCCCEEEEEeCCCCCcEEEEECC-----CCC---eeeEEEeC---CCCEEEEEEC--CCCEEEEEeCCCCeeEEE
Confidence 4 44 23478999999877666655321 111 12344433 5778888753 445799999988765554
Q ss_pred cc-CCcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 394 DI-PFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 394 t~-~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
.. +......+..+++.+++... ....|++++..+|+
T Consensus 284 ~~~~~~~P~giav~~~~ly~td~---~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 284 ISQGLPHPFAITVFEDSLYWTDW---HTKSINSANKFTGK 320 (386)
T ss_dssp ECSSCSSEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred EECCCCCceEEEEECCEEEEeeC---CCCeEEEEECCCCc
Confidence 33 33334455446666665543 23468888854554
No 363
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.73 E-value=2.5e-07 Score=94.95 Aligned_cols=214 Identities=11% Similarity=0.066 Sum_probs=122.7
Q ss_pred CCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEE
Q 004816 177 SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAFPRMDPRGERMA 256 (729)
Q Consensus 177 ~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la 256 (729)
...++|+... .....+.|+|||+.|+++.... ..|++++.+ ++.+.+........+..++|||+ |+
T Consensus 35 ~~~~~l~~~~----~~~egp~~~~~g~~l~~~d~~~--------~~i~~~~~~-g~~~~~~~~~~~~~gl~~d~dG~-l~ 100 (305)
T 3dr2_A 35 ARLLTLYDQA----TWSEGPAWWEAQRTLVWSDLVG--------RRVLGWRED-GTVDVLLDATAFTNGNAVDAQQR-LV 100 (305)
T ss_dssp CCCEEEECCC----SSEEEEEEEGGGTEEEEEETTT--------TEEEEEETT-SCEEEEEESCSCEEEEEECTTSC-EE
T ss_pred CceEEEecCC----cCccCCeEeCCCCEEEEEECCC--------CEEEEEeCC-CCEEEEeCCCCccceeeECCCCC-EE
Confidence 5677777652 2336789999999988875432 579999984 66666666666677889999998 44
Q ss_pred EEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEe----c----------CCCce
Q 004816 257 WIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTD----R----------KNGFW 322 (729)
Q Consensus 257 ~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~----~----------~~g~~ 322 (729)
.... ....|++++.+ |+............. ..+..+.+++||+++++-. . ..+..
T Consensus 101 v~~~-------~~~~v~~~~~~--g~~~~~~~~~~~~~~--~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~ 169 (305)
T 3dr2_A 101 HCEH-------GRRAITRSDAD--GQAHLLVGRYAGKRL--NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHH 169 (305)
T ss_dssp EEET-------TTTEEEEECTT--SCEEEEECEETTEEC--SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCE
T ss_pred EEEC-------CCCEEEEECCC--CCEEEEEeccCCCcc--CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCC
Confidence 4432 12458888864 544222111111000 2345789999999777421 0 01246
Q ss_pred EEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEEC---CeEEEEEEECCCCceE---eec-c
Q 004816 323 NLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN---GRSYLGILDDFGHSLS---LLD-I 395 (729)
Q Consensus 323 ~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~---g~~~ly~~d~~~g~~~---~lt-~ 395 (729)
.||++|+++++.+.+. ..... +.+.|.+ +++.+|+..... +...|++++++++.+. .+. .
T Consensus 170 ~v~~~d~~~g~~~~~~-~~~~p---------~gl~~sp---dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~ 236 (305)
T 3dr2_A 170 SVYRLPPDGSPLQRMA-DLDHP---------NGLAFSP---DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV 236 (305)
T ss_dssp EEEEECSSSCCCEEEE-EESSE---------EEEEECT---TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC
T ss_pred eEEEEcCCCCcEEEEe-cCCCC---------cceEEcC---CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC
Confidence 7999999888877665 21111 1234433 677777765432 1356777777654321 111 1
Q ss_pred CCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 396 PFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 396 ~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
.......+ .+.++.++ .+. ...|++++.++...
T Consensus 237 ~~~~pdgi~~d~~G~lw-v~~----~~gv~~~~~~g~~~ 270 (305)
T 3dr2_A 237 PDGLPDGFCVDRGGWLW-SSS----GTGVCVFDSDGQLL 270 (305)
T ss_dssp SSSCCCSEEECTTSCEE-ECC----SSEEEEECTTSCEE
T ss_pred CCCCCCeEEECCCCCEE-Eec----CCcEEEECCCCCEE
Confidence 12222334 23344443 333 13588998765443
No 364
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.73 E-value=5.3e-08 Score=98.53 Aligned_cols=102 Identities=14% Similarity=0.057 Sum_probs=74.5
Q ss_pred CCCEEEEEcCCCCCCccccch-hhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCC
Q 004816 491 KPPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKAD 569 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~-~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 569 (729)
..+.||++||...+. ...|. .+...|.++||.|+.+|++|.+.... . ...+++.+.++.+.+.. .
T Consensus 64 ~~~pVVLvHG~~~~~-~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~---~--------~~~~~la~~I~~l~~~~--g 129 (316)
T 3icv_A 64 VSKPILLVPGTGTTG-PQSFDSNWIPLSAQLGYTPCWISPPPFMLNDT---Q--------VNTEYMVNAITTLYAGS--G 129 (316)
T ss_dssp CSSEEEEECCTTCCH-HHHHTTTHHHHHHHTTCEEEEECCTTTTCSCH---H--------HHHHHHHHHHHHHHHHT--T
T ss_pred CCCeEEEECCCCCCc-HHHHHHHHHHHHHHCCCeEEEecCCCCCCCcH---H--------HHHHHHHHHHHHHHHHh--C
Confidence 346789999974332 13455 67888999999999999987532111 1 12466777888877763 3
Q ss_pred CCcEEEEEcChHHHHHHHHHh-C---CCcceEEEEeccccC
Q 004816 570 EKRLCITGGSAGGYTTLAALA-F---RDTFKAGASLYGVAD 606 (729)
Q Consensus 570 ~~ri~i~G~S~GG~~a~~~~~-~---~~~~~a~v~~~~~~d 606 (729)
.+++.|+||||||.++..++. + +++++.+|++++...
T Consensus 130 ~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 130 NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred CCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 378999999999999977776 4 589999999988653
No 365
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.72 E-value=2e-06 Score=95.61 Aligned_cols=88 Identities=5% Similarity=-0.147 Sum_probs=58.4
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCe-ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcC--CCc
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN--GQN 232 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~-~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~--~g~ 232 (729)
.++.+...++.|+++|.++ ++.. .+..+ .....+.+||||++++.. ... ..|+++|+. +++
T Consensus 168 ~~~V~~~~~~~V~viD~~t--~~v~~~i~~g-----~~p~~v~~SpDGr~lyv~-~~d--------g~V~viD~~~~t~~ 231 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGST--YEIKTVLDTG-----YAVHISRLSASGRYLFVI-GRD--------GKVNMIDLWMKEPT 231 (567)
T ss_dssp EEEEEETTTTEEEEEETTT--CCEEEEEECS-----SCEEEEEECTTSCEEEEE-ETT--------SEEEEEETTSSSCC
T ss_pred eEEEEeCCCCeEEEEECCC--CeEEEEEeCC-----CCccceEECCCCCEEEEE-cCC--------CeEEEEECCCCCCc
Confidence 4555666677999999987 5433 44433 223467899999986544 322 469999995 554
Q ss_pred e-EEeeeCCCeeeeeeeC----CCCCeEEEEEe
Q 004816 233 I-QVLVSGSDFYAFPRMD----PRGERMAWIEW 260 (729)
Q Consensus 233 ~-~~lt~~~~~~~~~~~S----PDG~~la~~~~ 260 (729)
. ..+..+. .-.+..+| |||++++....
T Consensus 232 ~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~ 263 (567)
T 1qks_A 232 TVAEIKIGS-EARSIETSKMEGWEDKYAIAGAY 263 (567)
T ss_dssp EEEEEECCS-EEEEEEECCSTTCTTTEEEEEEE
T ss_pred EeEEEecCC-CCceeEEccccCCCCCEEEEEEc
Confidence 4 3443333 34567899 79999887663
No 366
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.72 E-value=3.7e-06 Score=87.81 Aligned_cols=229 Identities=14% Similarity=0.082 Sum_probs=141.7
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV 235 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~ 235 (729)
.++|.. ...|+.+++++ .....+... ......+.|+++++.|+++... ...|++++++++..+.
T Consensus 46 ~ll~~~--~~~I~~i~~~g--~~~~~~~~~----~~~~~~l~~d~~~~~ly~~D~~--------~~~I~r~~~~g~~~~~ 109 (349)
T 3v64_C 46 VLLFAN--RIDIRQVLPHR--SEYTLLLNN----LENAIALDFHHRRELVFWSDVT--------LDRILRANLNGSNVEE 109 (349)
T ss_dssp EEEEEC--BSCEEEECTTS--CCEEEEECS----CSCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEE
T ss_pred eeEeec--ccceEEEeCCC--CeeEEeecC----CCceEEEEEeccccEEEEEecc--------CCceEEEecCCCCceE
Confidence 456663 34699999987 655555443 2334677899988887776432 2579999999887666
Q ss_pred eee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEE
Q 004816 236 LVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFF 313 (729)
Q Consensus 236 lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~ 313 (729)
+.. +.....+.++.++++.|+|+... ...|++++++ |... ..+....- .....++..|++. |||
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~-------~~~I~~~~~d--G~~~-~~l~~~~l----~~P~~iavdp~~g~ly~ 175 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSG-------TSRIEVANLD--GAHR-KVLLWQSL----EKPRAIALHPMEGTIYW 175 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETT-------TTEEEEEETT--SCSC-EEEECTTC----SCEEEEEEETTTTEEEE
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCC-------CCeEEEEcCC--CCce-EEEEeCCC----CCcceEEEecCcCeEEE
Confidence 543 33445678899988999988742 3469999987 3322 22333221 3445678888766 555
Q ss_pred EEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEee
Q 004816 314 VTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 393 (729)
Q Consensus 314 ~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~l 393 (729)
+ +. .....|+++++++...+.+.... . .| .+.+.+.+ +++.|||+-. +...|++++++++..+.+
T Consensus 176 t-d~-~~~~~I~r~~~dG~~~~~~~~~~--~---~~---PnGla~d~---~~~~lY~aD~--~~~~I~~~~~dG~~~~~~ 240 (349)
T 3v64_C 176 T-DW-GNTPRIEASSMDGSGRRIIADTH--L---FW---PNGLTIDY---AGRRMYWVDA--KHHVIERANLDGSHRKAV 240 (349)
T ss_dssp E-EC-SSSCEEEEEETTSCSCEESCCSS--C---SC---EEEEEEET---TTTEEEEEET--TTTEEEEEETTSCSCEEE
T ss_pred e-cc-CCCCEEEEEeCCCCCcEEEEECC--C---CC---cceEEEeC---CCCEEEEEEC--CCCEEEEEeCCCCceEEE
Confidence 5 44 23478999999876666554321 1 11 12344433 5778888753 445899999988765554
Q ss_pred c-cCCcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 394 D-IPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 394 t-~~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
. .+......+..+++.+++.... ...|++++..+|+
T Consensus 241 ~~~~~~~P~giav~~~~ly~td~~---~~~V~~~~~~~G~ 277 (349)
T 3v64_C 241 ISQGLPHPFAITVFEDSLYWTDWH---TKSINSANKFTGK 277 (349)
T ss_dssp ECSSCSSEEEEEEETTEEEEEETT---TTEEEEEETTTCC
T ss_pred EeCCCCCceEEEEECCEEEEecCC---CCeEEEEEccCCC
Confidence 3 3333334454456666555432 2467777754443
No 367
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.72 E-value=1.1e-07 Score=117.50 Aligned_cols=278 Identities=10% Similarity=0.022 Sum_probs=153.2
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcE
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRL 167 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l 167 (729)
.+..+.++| ++.++.-. .+|...+|....+ +....... +........++++ ..+++...++.|
T Consensus 963 ~i~~~~~sp~g~~l~~g~----~~g~i~i~d~~~~---~~~~~~~~--------h~~~v~~l~~s~dg~~l~s~~~dg~i 1027 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGD----EDGAIKIIELPNN---RVFSSGVG--------HKKAVRHIQFTADGKTLISSSEDSVI 1027 (1249)
T ss_dssp CEEEEEECTTSSEEEEEE----TTSCCEEEETTTT---SCEEECCC--------CSSCCCCEEECSSSSCEEEECSSSBE
T ss_pred cEEEEEEcCCCCEEEEEc----CCCCEEEEEcCCC---ceeeeccc--------CCCceEEEEECCCCCEEEEEcCCCEE
Confidence 356778888 66555433 3566677765433 22222111 1122333444433 345556678899
Q ss_pred EEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE-EeeeCCCeeeee
Q 004816 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-VLVSGSDFYAFP 246 (729)
Q Consensus 168 ~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~-~lt~~~~~~~~~ 246 (729)
.+|++.+ ++...+... ...+....|+|++..+ ....+ ..|.++|+.+++.. .+..........
T Consensus 1028 ~vwd~~~--~~~~~~~~~----~~~v~~~~~~~~~~l~-~~~~d---------g~v~vwd~~~~~~~~~~~~~~~~v~~~ 1091 (1249)
T 3sfz_A 1028 QVWNWQT--GDYVFLQAH----QETVKDFRLLQDSRLL-SWSFD---------GTVKVWNVITGRIERDFTCHQGTVLSC 1091 (1249)
T ss_dssp EEEETTT--TEEECCBCC----SSCEEEEEECSSSEEE-EEESS---------SEEEEEETTTTCCCEEEECCSSCCCCE
T ss_pred EEEECCC--CceEEEecC----CCcEEEEEEcCCCcEE-EEECC---------CcEEEEECCCCceeEEEcccCCcEEEE
Confidence 9999987 655555443 3556788899988743 33322 46999999988754 444445567788
Q ss_pred eeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEE
Q 004816 247 RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHK 326 (729)
Q Consensus 247 ~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~ 326 (729)
+|||||+.|+..+.+ ..|.++|+. +++. ...+.+.. ..+..++|+|||+++++... .|. |.+
T Consensus 1092 ~~s~d~~~l~s~s~d--------~~v~iwd~~-~~~~--~~~l~~h~----~~v~~~~~s~dg~~lat~~~-dg~--i~v 1153 (1249)
T 3sfz_A 1092 AISSDATKFSSTSAD--------KTAKIWSFD-LLSP--LHELKGHN----GCVRCSAFSLDGILLATGDD-NGE--IRI 1153 (1249)
T ss_dssp EECSSSSSCEEECCS--------SCCCEECSS-SSSC--SBCCCCCS----SCEEEEEECSSSSEEEEEET-TSC--CCE
T ss_pred EECCCCCEEEEEcCC--------CcEEEEECC-Ccce--eeeeccCC----CcEEEEEECCCCCEEEEEeC-CCE--EEE
Confidence 999999998876532 337788887 5653 33344444 55677899999995555544 354 555
Q ss_pred EEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceE-eeccCCcceEEe-
Q 004816 327 WIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTDIDNI- 403 (729)
Q Consensus 327 ~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~-~lt~~~~~v~~~- 403 (729)
+|..+++..... +................+.|.+ +++.++.. +| .|.++++.+++.. .+......+..+
T Consensus 1154 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~---dg~~l~s~---~g--~v~vwd~~~g~~~~~~~~~~~~i~~~~ 1225 (1249)
T 3sfz_A 1154 WNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSP---DSKTLVSA---GG--YLKWWNVATGDSSQTFYTNGTNLKKIH 1225 (1249)
T ss_dssp EESSSSCCCCCCCCCC-------CCSCCCEEEECT---TSSCEEEE---SS--SEEEBCSSSCBCCCCCCCSSCCCCCCE
T ss_pred EECCCCceEEEeccccccccccccCceEEEEEECC---CCCEEEEC---CC--eEEEEECCCCceeeeeeccCCcccEEE
Confidence 677776543221 0000000000011123445553 66655533 25 4555577676643 333334445555
Q ss_pred eeeCCEEEEEEeCCCCCceEEEEE
Q 004816 404 TLGNDCLFVEGASGVEPSSVAKVT 427 (729)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~ly~~d 427 (729)
..+++..+++.+.. +.++.++
T Consensus 1226 ~s~dg~~l~~~~~d---g~v~vw~ 1246 (1249)
T 3sfz_A 1226 VSPDFRTYVTVDNL---GILYILQ 1246 (1249)
T ss_dssp ECSSSCCEEEECTT---CCEEEEC
T ss_pred ECCCCCEEEEecCC---cEEEEEe
Confidence 34444444444332 2455444
No 368
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.71 E-value=1.3e-06 Score=91.95 Aligned_cols=229 Identities=7% Similarity=-0.010 Sum_probs=130.1
Q ss_pred EEEEECCCCcEEEEeCCCCCCC-CeecCCCCCCCceeeecceecCC--CCEEEEEEeccCCCCCCcceEEEEEEcCCCce
Q 004816 157 VIFSNYKDQRLYKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (729)
Q Consensus 157 i~~~~~~~~~l~~~d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPd--G~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~ 233 (729)
.+++...++.|.+|++.++.+. ...+... ...+...+|+|+ |+.|+....+ ..|.++|+.+++.
T Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~ 91 (379)
T 3jrp_A 25 RLATCSSDKTIKIFEVEGETHKLIDTLTGH----EGPVWRVDWAHPKFGTILASCSYD---------GKVLIWKEENGRW 91 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------SCEEEEEEETTEE
T ss_pred EEEEEECCCcEEEEecCCCcceeeeEecCC----CCcEEEEEeCCCCCCCEEEEeccC---------CEEEEEEcCCCce
Confidence 4455556788999998741022 2233333 345678899988 8877666543 3588889888753
Q ss_pred E---EeeeCCCeeeeeeeCCC--CCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCC-
Q 004816 234 Q---VLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS- 307 (729)
Q Consensus 234 ~---~lt~~~~~~~~~~~SPD--G~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wsp- 307 (729)
. .+..........+|+|+ |+.|+... ....|.++|+. ++.......+.... ..+..+.|+|
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--------~d~~i~v~d~~-~~~~~~~~~~~~~~----~~v~~~~~~~~ 158 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVAS--------SDGKVSVVEFK-ENGTTSPIIIDAHA----IGVNSASWAPA 158 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEE--------TTSEEEEEECC-TTSCCCEEEEECCT----TCEEEEEECCC
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEec--------CCCcEEEEecC-CCCceeeEEecCCC----CceEEEEEcCc
Confidence 2 23334456778899999 99888776 23459999998 55332233444444 5667889999
Q ss_pred ------------CCcEEEEEecCCCceEEEEEEcCCCe--EEEe---eccCccccCCcccccCcceeeeeecCCC--CEE
Q 004816 308 ------------KGELFFVTDRKNGFWNLHKWIESNNE--VLAI---YSLDAEFSRPLWVFGINSYEIIQSHGEK--NLI 368 (729)
Q Consensus 308 ------------DG~l~~~~~~~~g~~~l~~~d~~~g~--~~~l---~~~~~~~~~~~w~~~~~~~~~l~~~~~~--~~l 368 (729)
|+++++.... .+. |.++|+.+++ ...+ ......+....|++ ++ +.+
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~-dg~--i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp------------~~~~~~~ 223 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRKFVTGGA-DNL--VKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP------------TVLLRSY 223 (379)
T ss_dssp C----------CTTCEEEEEET-TSC--EEEEEEETTTTEEEEEEEECCCSSCEEEEEECC------------CCSSSEE
T ss_pred cccccccccCCCCCCEEEEEeC-CCe--EEEEEecCCCcceeeEEEEecccCcEeEEEECC------------CCCCCCe
Confidence 6775545444 454 4455554442 1222 12222233333433 43 567
Q ss_pred EEEEEECCeEEEEEEECCCCc-eEee-cc--CCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcC
Q 004816 369 ACSYRQNGRSYLGILDDFGHS-LSLL-DI--PFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLD 429 (729)
Q Consensus 369 ~~~s~~~g~~~ly~~d~~~g~-~~~l-t~--~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~ 429 (729)
+++...+|...||-++..... ...+ .. ....+..+ ..+++.+++.++. +. .++.+++.
T Consensus 224 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg--~i~iw~~~ 286 (379)
T 3jrp_A 224 LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-DN--KVTLWKEN 286 (379)
T ss_dssp EEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES-SS--SEEEEEEE
T ss_pred EEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC-CC--cEEEEeCC
Confidence 777778888777765432211 2222 22 33456666 4445555555554 32 34444444
No 369
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.71 E-value=3.7e-06 Score=88.12 Aligned_cols=233 Identities=8% Similarity=0.024 Sum_probs=136.3
Q ss_pred eEEEECC-EEEEEECCCCcEEEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEE
Q 004816 149 AFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (729)
Q Consensus 149 ~~~~~~~-~i~~~~~~~~~l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~ 226 (729)
+..++.+ ..+++...++.|.+||..+ +.. ..+... ...+...+|+|||+.|+....+ ..+.++
T Consensus 69 ~~~~s~d~~~l~s~s~Dg~v~vWd~~~--~~~~~~~~~~----~~~v~~~~~sp~g~~lasg~~d---------~~i~v~ 133 (354)
T 2pbi_B 69 CMDWCKDKRRIVSSSQDGKVIVWDSFT--TNKEHAVTMP----CTWVMACAYAPSGCAIACGGLD---------NKCSVY 133 (354)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTT--CCEEEEEECS----SSCCCEEEECTTSSEEEEESTT---------SEEEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCC--CCcceEEecC----CCCEEEEEECCCCCEEEEeeCC---------CCEEEE
Confidence 3444433 4567777888999999876 432 333332 2345778899999987765433 345566
Q ss_pred EcCCC-------ceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCcccc
Q 004816 227 ALNGQ-------NIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVES 299 (729)
Q Consensus 227 dl~~g-------~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~ 299 (729)
++... ....+...........|+||+++|+..+. ...|.++|+. +++. ...+.+.. ..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~--------D~~v~lwd~~-~~~~--~~~~~~h~----~~ 198 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG--------DGTCALWDVE-SGQL--LQSFHGHG----AD 198 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEET--------TSEEEEEETT-TCCE--EEEEECCS----SC
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeC--------CCcEEEEeCC-CCeE--EEEEcCCC----CC
Confidence 65432 22344444556677899999999886662 3458999998 6765 44555554 44
Q ss_pred ccCceeCC--CCcEEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECC
Q 004816 300 PTEPKWSS--KGELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 376 (729)
Q Consensus 300 ~~~~~wsp--DG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g 376 (729)
+....|+| +|++++.... .+ .|.++|+.+++..... .....+.. +.|.| +++ ++++...++
T Consensus 199 v~~~~~~~~~~g~~l~sgs~-Dg--~v~~wd~~~~~~~~~~~~h~~~v~~---------v~~~p---~~~-~l~s~s~D~ 262 (354)
T 2pbi_B 199 VLCLDLAPSETGNTFVSGGC-DK--KAMVWDMRSGQCVQAFETHESDVNS---------VRYYP---SGD-AFASGSDDA 262 (354)
T ss_dssp EEEEEECCCSSCCEEEEEET-TS--CEEEEETTTCCEEEEECCCSSCEEE---------EEECT---TSS-EEEEEETTS
T ss_pred eEEEEEEeCCCCCEEEEEeC-CC--eEEEEECCCCcEEEEecCCCCCeEE---------EEEeC---CCC-EEEEEeCCC
Confidence 45566766 5665555544 34 4666788887654433 22222222 33432 444 555666778
Q ss_pred eEEEEEEECCCCceEe-eccC--CcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 377 RSYLGILDDFGHSLSL-LDIP--FTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 377 ~~~ly~~d~~~g~~~~-lt~~--~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
..+|| |+..++... +... ...+..+ ...++.+++.++.. ..+.++|+..++
T Consensus 263 ~v~lw--d~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d---~~i~vwd~~~~~ 317 (354)
T 2pbi_B 263 TCRLY--DLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND---YTINVWDVLKGS 317 (354)
T ss_dssp CEEEE--ETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT---SCEEEEETTTCS
T ss_pred eEEEE--ECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC---CcEEEEECCCCc
Confidence 76666 665554332 2222 1234455 44455566655533 367777876665
No 370
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.71 E-value=1.8e-07 Score=98.89 Aligned_cols=199 Identities=10% Similarity=-0.037 Sum_probs=111.2
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcE
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRL 167 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l 167 (729)
.+..+.|+| ++.++. .. .++...+|..... ..+.+..-. .+.....+..++++ ..+++...++.|
T Consensus 13 ~v~~~~~s~~g~~l~~-~~---~d~~i~iw~~~~~---~~~~~~~~~------~h~~~v~~~~~s~~~~~l~s~s~d~~v 79 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVT-TT---ATNQVELYEQDGN---GWKHARTFS------DHDKIVTCVDWAPKSNRIVTCSQDRNA 79 (377)
T ss_dssp CCSCCEECSSSSEEEC-CC---SSSCBCEEEEETT---EEEECCCBC------CCSSCEEEEEECTTTCCEEEEETTSSE
T ss_pred cEEEEEECCCCCEEEE-ec---CCCEEEEEEccCC---ceEEEEEEe------cCCceEEEEEEeCCCCEEEEEeCCCeE
Confidence 567899999 664443 21 3567778876432 111111100 01222334444433 445555567889
Q ss_pred EEEeCCCCCCC----CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc----eEEeee-
Q 004816 168 YKHSIDSKDSS----PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN----IQVLVS- 238 (729)
Q Consensus 168 ~~~d~~~~~~~----~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~----~~~lt~- 238 (729)
.+|++.+ +. ...+... ...+...+|+|||+.|+....+ ..|.++++.+++ .+.+..
T Consensus 80 ~vwd~~~--~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~~~~~~ 144 (377)
T 3dwl_C 80 YVYEKRP--DGTWKQTLVLLRL----NRAATFVRWSPNEDKFAVGSGA---------RVISVCYFEQENDWWVSKHLKRP 144 (377)
T ss_dssp EEC--------CCCCEEECCCC----SSCEEEEECCTTSSCCEEEESS---------SCEEECCC-----CCCCEEECSS
T ss_pred EEEEcCC--CCceeeeeEeccc----CCceEEEEECCCCCEEEEEecC---------CeEEEEEECCcccceeeeEeecc
Confidence 9999987 44 2333333 3457888999999988776653 358888888775 455554
Q ss_pred CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe---------------e-eeEEecCCCCCccccccC
Q 004816 239 GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV---------------Y-KRVCVAGFDPTIVESPTE 302 (729)
Q Consensus 239 ~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~---------------~-~~~~~~~~~~~~~~~~~~ 302 (729)
........+|+|||+.|+..+.+ ..|.++|+. .++. . ....+ +.. ..+..
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~v~~ 210 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCAD--------RKAYVLSAY-VRDVDAKPEASVWGSRLPFNTVCAEY-PSG----GWVHA 210 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESS--------SCEEEEEEC-CSSCC-CCCSCSSCSCCCEEEEEECC-CCS----SSEEE
T ss_pred cCCCeEEEEEcCCCCEEEEEeCC--------CEEEEEEEE-ecccCCCccccccccccchhhhhhcc-cCC----ceEEE
Confidence 45567788999999998877632 348888875 2210 1 11112 333 45677
Q ss_pred ceeCCCCc-EEEEEecCCCceEEEEEEcCCCeE
Q 004816 303 PKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEV 334 (729)
Q Consensus 303 ~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~ 334 (729)
+.|+|||+ |+..+. .+ .|.++|..+++.
T Consensus 211 ~~~sp~~~~l~~~~~--d~--~i~iwd~~~~~~ 239 (377)
T 3dwl_C 211 VGFSPSGNALAYAGH--DS--SVTIAYPSAPEQ 239 (377)
T ss_dssp EEECTTSSCEEEEET--TT--EEC-CEECSTTS
T ss_pred EEECCCCCEEEEEeC--CC--cEEEEECCCCCC
Confidence 89999999 554443 34 455567666653
No 371
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.71 E-value=4.7e-07 Score=96.12 Aligned_cols=204 Identities=10% Similarity=0.106 Sum_probs=129.4
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCc
Q 004816 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQR 166 (729)
Q Consensus 88 ~~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 166 (729)
...+.++.|++ ++.|||++.. .+ .|++.+.+++ ..+.+...+ +....+.++.+.++.|+|.+...+.
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~---~~--~I~r~~~~g~-~~~~~~~~~------~~~p~glavd~~~g~lY~~d~~~~~ 182 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVT---LD--RILRANLNGS-NVEEVVSTG------LESPGGLAVDWVHDKLYWTDSGTSR 182 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETT---TT--EEEEEETTSC-CEEEEECSS------CSCCCCEEEETTTTEEEEEETTTTE
T ss_pred CCccEEEEEecCCCeEEEEeCC---CC--cEEEEecCCC-CcEEEEeCC------CCCccEEEEEeCCCeEEEEcCCCCe
Confidence 35677899998 9999999863 23 4777776622 333333222 1122233444457789999887889
Q ss_pred EEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee-CCCeeee
Q 004816 167 LYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS-GSDFYAF 245 (729)
Q Consensus 167 l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~-~~~~~~~ 245 (729)
|+++++++ ...+.+.... .....+.+++|++.+|+++.... ...|+++++++...+.+.. +...-.+
T Consensus 183 I~~~~~dg--~~~~~l~~~~---l~~P~giavdp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~~~~~~~PnG 250 (386)
T 3v65_B 183 IEVANLDG--AHRKVLLWQS---LEKPRAIALHPMEGTIYWTDWGN-------TPRIEASSMDGSGRRIIADTHLFWPNG 250 (386)
T ss_dssp EEECBTTS--CSCEEEECSS---CSCEEEEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred EEEEeCCC--CceEEeecCC---CCCCcEEEEEcCCCeEEEeccCC-------CCEEEEEeCCCCCcEEEEECCCCCeee
Confidence 99999986 5555554331 13347788999999877764322 2579999999876666653 4445678
Q ss_pred eeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEE
Q 004816 246 PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLH 325 (729)
Q Consensus 246 ~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~ 325 (729)
.+|+|++++|+|+... ...|++++++ +... ..+..... .....++. .++.+|++ +. +...|.
T Consensus 251 lavd~~~~~lY~aD~~-------~~~I~~~d~d-G~~~--~~~~~~~~----~~P~giav-~~~~ly~t-d~--~~~~V~ 312 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAK-------HHVIERANLD-GSHR--KAVISQGL----PHPFAITV-FEDSLYWT-DW--HTKSIN 312 (386)
T ss_dssp EEEEGGGTEEEEEETT-------TTEEEEECTT-SCSC--EEEECSSC----SSEEEEEE-ETTEEEEE-ET--TTTEEE
T ss_pred EEEeCCCCEEEEEECC-------CCEEEEEeCC-CCee--EEEEECCC----CCceEEEE-ECCEEEEe-eC--CCCeEE
Confidence 9999999999988732 3569999987 3322 22333222 33345555 23335555 43 445788
Q ss_pred EEEcCCCe
Q 004816 326 KWIESNNE 333 (729)
Q Consensus 326 ~~d~~~g~ 333 (729)
+++..+|+
T Consensus 313 ~~~~~~G~ 320 (386)
T 3v65_B 313 SANKFTGK 320 (386)
T ss_dssp EEETTTCC
T ss_pred EEECCCCc
Confidence 88854544
No 372
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.71 E-value=1.2e-06 Score=87.70 Aligned_cols=199 Identities=12% Similarity=0.091 Sum_probs=123.8
Q ss_pred ECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc
Q 004816 153 FGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (729)
Q Consensus 153 ~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~ 232 (729)
.++.|++.+...+.|+++++++ +..+.+.... .......+++|+++.|+++... ...|+++++++..
T Consensus 46 ~~~~ly~~d~~~~~I~~~~~~g--~~~~~~~~~~---~~~p~~ia~d~~~~~lyv~d~~--------~~~I~~~~~~g~~ 112 (267)
T 1npe_A 46 VDKVVYWTDISEPSIGRASLHG--GEPTTIIRQD---LGSPEGIALDHLGRTIFWTDSQ--------LDRIEVAKMDGTQ 112 (267)
T ss_dssp TTTEEEEEETTTTEEEEEESSS--CCCEEEECTT---CCCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCS
T ss_pred CCCEEEEEECCCCEEEEEecCC--CCcEEEEECC---CCCccEEEEEecCCeEEEEECC--------CCEEEEEEcCCCC
Confidence 3568888887778999999987 5555443221 1234678899998887665432 2579999998766
Q ss_pred eEEeee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcE
Q 004816 233 IQVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGEL 311 (729)
Q Consensus 233 ~~~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l 311 (729)
.+.+.. +.....+.+++|++.+|+++.... ....|++++++ |+.. ..+....- .....+++++|++.
T Consensus 113 ~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~-----~~~~I~~~~~d--g~~~-~~~~~~~~----~~P~gia~d~~~~~ 180 (267)
T 1npe_A 113 RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR-----DNPKIETSHMD--GTNR-RILAQDNL----GLPNGLTFDAFSSQ 180 (267)
T ss_dssp CEEEECSSCSSEEEEEEETTTTEEEEEECCS-----SSCEEEEEETT--SCCC-EEEECTTC----SCEEEEEEETTTTE
T ss_pred EEEEEECCCCCccEEEEeeCCCEEEEEECCC-----CCcEEEEEecC--CCCc-EEEEECCC----CCCcEEEEcCCCCE
Confidence 555543 324456779999999998877432 13569999886 3321 22222221 34567889998874
Q ss_pred EEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce-
Q 004816 312 FFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL- 390 (729)
Q Consensus 312 ~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~- 390 (729)
+|.++. +...|++++++++..+.+... ...| ..+.+ +++.+|++... ...|++++.++++.
T Consensus 181 lyv~d~--~~~~I~~~~~~g~~~~~~~~~---~~~P------~gi~~-----d~~~lyva~~~--~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 181 LCWVDA--GTHRAECLNPAQPGRRKVLEG---LQYP------FAVTS-----YGKNLYYTDWK--TNSVIAMDLAISKEM 242 (267)
T ss_dssp EEEEET--TTTEEEEEETTEEEEEEEEEC---CCSE------EEEEE-----ETTEEEEEETT--TTEEEEEETTTTEEE
T ss_pred EEEEEC--CCCEEEEEecCCCceEEEecC---CCCc------eEEEE-----eCCEEEEEECC--CCeEEEEeCCCCCce
Confidence 444444 446899999987655544321 1111 12222 56677775533 33688889887663
Q ss_pred Eeec
Q 004816 391 SLLD 394 (729)
Q Consensus 391 ~~lt 394 (729)
+.+.
T Consensus 243 ~~i~ 246 (267)
T 1npe_A 243 DTFH 246 (267)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 3443
No 373
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.70 E-value=9e-07 Score=93.72 Aligned_cols=201 Identities=9% Similarity=-0.029 Sum_probs=122.5
Q ss_pred eeeecceecCCC-CEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee---CCCeeeeeeeCC-CCCeEEEEEecCCCC
Q 004816 191 VSYADGIFDPRF-NRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS---GSDFYAFPRMDP-RGERMAWIEWHHPNM 265 (729)
Q Consensus 191 ~~~~~~~~SPdG-~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~---~~~~~~~~~~SP-DG~~la~~~~~~~~~ 265 (729)
..+..++|+||| +.|+....+ ..|.++++.+++...... ........+|+| |++.|+..+
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~------ 138 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKG---------GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS------ 138 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBT---------SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE------
T ss_pred CCEEEEEECCCCCCEEEEEcCC---------CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe------
Confidence 446788999999 766555443 358899999877665543 345677889999 667776555
Q ss_pred CCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCcccc
Q 004816 266 PWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFS 345 (729)
Q Consensus 266 ~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~ 345 (729)
....|.++|+. +... ..+.... .....+..+.|+||+++++.... .+ .|.++|+.+.....+......+.
T Consensus 139 --~d~~i~iwd~~-~~~~---~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~h~~~v~ 208 (383)
T 3ei3_B 139 --IRGATTLRDFS-GSVI---QVFAKTD-SWDYWYCCVDVSVSRQMLATGDS-TG--RLLLLGLDGHEIFKEKLHKAKVT 208 (383)
T ss_dssp --TTTEEEEEETT-SCEE---EEEECCC-CSSCCEEEEEEETTTTEEEEEET-TS--EEEEEETTSCEEEEEECSSSCEE
T ss_pred --CCCEEEEEECC-CCce---EEEeccC-CCCCCeEEEEECCCCCEEEEECC-CC--CEEEEECCCCEEEEeccCCCcEE
Confidence 23458999987 4433 2222221 00044667899999995555444 34 56677776555555554333333
Q ss_pred CCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCC----CceEeeccCCcceEEe-eee-CCEEEEEEeCCCC
Q 004816 346 RPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG----HSLSLLDIPFTDIDNI-TLG-NDCLFVEGASGVE 419 (729)
Q Consensus 346 ~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~----g~~~~lt~~~~~v~~~-~~~-~~~~~~~~~~~~~ 419 (729)
...|.+ +++.++++...++...|| |+.+ +...........+..+ ..+ ++.+++.++..
T Consensus 209 ~~~~~~------------~~~~~l~s~~~d~~i~iw--d~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d-- 272 (383)
T 3ei3_B 209 HAEFNP------------RCDWLMATSSVDATVKLW--DLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQR-- 272 (383)
T ss_dssp EEEECS------------SCTTEEEEEETTSEEEEE--EGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESS--
T ss_pred EEEECC------------CCCCEEEEEeCCCEEEEE--eCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCC--
Confidence 344443 555467777778876666 5444 3333322445567776 444 55565655543
Q ss_pred CceEEEEEcCCCcc
Q 004816 420 PSSVAKVTLDDHKL 433 (729)
Q Consensus 420 ~~~ly~~d~~~~~~ 433 (729)
..+.++|+.+++.
T Consensus 273 -~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 273 -NEIRVYSSYDWSK 285 (383)
T ss_dssp -SEEEEEETTBTTS
T ss_pred -CcEEEEECCCCcc
Confidence 4788888887653
No 374
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.70 E-value=3.9e-09 Score=117.26 Aligned_cols=129 Identities=17% Similarity=0.138 Sum_probs=83.1
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcccc-------chhhhHHHhhC-CcEEEEecCCCCC-CCchh
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-------LNLSIQYWTSR-GWAFVDVNYGGST-GYGRE 538 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~-------~~~~~~~la~~-G~~v~~~d~rGs~-g~g~~ 538 (729)
|...+ .+|.|.... ...++.|+||++|||++...... +......|+.+ |++|+.+|||.+. |+...
T Consensus 79 dcl~l--nv~~P~~~~---~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~ 153 (579)
T 2bce_A 79 DCLYL--NIWVPQGRK---EVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLST 153 (579)
T ss_dssp CCCEE--EEEEEECSS---SCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCC
T ss_pred CCCEE--EEEECCCCC---CCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcC
Confidence 54444 456675421 01356899999999864322211 11123455554 7999999999421 21111
Q ss_pred HHHhhccCCCcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHh---CCCcceEEEEeccc
Q 004816 539 FRERLLGRWGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALA---FRDTFKAGASLYGV 604 (729)
Q Consensus 539 ~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~---~~~~~~a~v~~~~~ 604 (729)
...... +...+.|+.++++|+.++ ...|++||.|+|+|+||+++..++. ....|+++|+.+|.
T Consensus 154 ~~~~~p---gn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 154 GDSNLP---GNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp SSTTCC---CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CCCCCC---CccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 000111 222378999999999875 3469999999999999999987776 35689999998874
No 375
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.70 E-value=2.7e-07 Score=95.82 Aligned_cols=224 Identities=11% Similarity=0.006 Sum_probs=137.5
Q ss_pred EEEEECCCCcEEEEeCCCCCCC----CeecCCCCCCCceeeecceecCCCC-EEEEEEeccCCCCCCcceEEEEEEc-CC
Q 004816 157 VIFSNYKDQRLYKHSIDSKDSS----PLPITPDYGEPLVSYADGIFDPRFN-RYVTVREDRRQDALNSTTEIVAIAL-NG 230 (729)
Q Consensus 157 i~~~~~~~~~l~~~d~~~~~~~----~~~lt~~~~~~~~~~~~~~~SPdG~-~l~~~~~~~~~~~~~~~~~l~~~dl-~~ 230 (729)
.+++...++.|.+|++.+ +. ...+... ...+..++|+|||+ .|+....+ ..|+++++ .+
T Consensus 25 ~l~~~~~d~~v~iw~~~~--~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~d---------g~i~~wd~~~~ 89 (342)
T 1yfq_A 25 LLLITSWDGSLTVYKFDI--QAKNVDLLQSLRY----KHPLLCCNFIDNTDLQIYVGTVQ---------GEILKVDLIGS 89 (342)
T ss_dssp EEEEEETTSEEEEEEEET--TTTEEEEEEEEEC----SSCEEEEEEEESSSEEEEEEETT---------SCEEEECSSSS
T ss_pred EEEEEcCCCeEEEEEeCC--CCccccceeeeec----CCceEEEEECCCCCcEEEEEcCC---------CeEEEEEeccC
Confidence 344555678899999887 54 3444333 34567889999999 77666543 46999999 98
Q ss_pred CceEEeee--CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCC---------CCeeeeEEecCCCCCcccc
Q 004816 231 QNIQVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN---------GDVYKRVCVAGFDPTIVES 299 (729)
Q Consensus 231 g~~~~lt~--~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~---------g~~~~~~~~~~~~~~~~~~ 299 (729)
++...+.. .........|+| ++.|+..+. ...|.++|+. + ++. ...+. .. ..
T Consensus 90 ~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~--------d~~i~iwd~~-~~~~~~~~~~~~~--~~~~~-~~----~~ 152 (342)
T 1yfq_A 90 PSFQALTNNEANLGICRICKYG-DDKLIAASW--------DGLIEVIDPR-NYGDGVIAVKNLN--SNNTK-VK----NK 152 (342)
T ss_dssp SSEEECBSCCCCSCEEEEEEET-TTEEEEEET--------TSEEEEECHH-HHTTBCEEEEESC--SSSSS-SC----CC
T ss_pred CceEeccccCCCCceEEEEeCC-CCEEEEEcC--------CCeEEEEccc-ccccccccccCCe--eeEEe-eC----Cc
Confidence 88877766 666677889999 888876662 3458888887 3 321 11122 22 45
Q ss_pred ccCceeCCCCcEEEEEecCCCceEEEEEEcCC-CeE--EEee-ccCccccCCcccccCcceeeeeecCC-CCEEEEEEEE
Q 004816 300 PTEPKWSSKGELFFVTDRKNGFWNLHKWIESN-NEV--LAIY-SLDAEFSRPLWVFGINSYEIIQSHGE-KNLIACSYRQ 374 (729)
Q Consensus 300 ~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~-g~~--~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~-~~~l~~~s~~ 374 (729)
+..+.|+|++ ++.... .+ .|.++|+.+ +.. .... .....+ ..+.|. . ++.++++...
T Consensus 153 v~~~~~~~~~-l~~~~~--d~--~i~i~d~~~~~~~~~~~~~~~~~~~i---------~~i~~~----~~~~~~l~~~~~ 214 (342)
T 1yfq_A 153 IFTMDTNSSR-LIVGMN--NS--QVQWFRLPLCEDDNGTIEESGLKYQI---------RDVALL----PKEQEGYACSSI 214 (342)
T ss_dssp EEEEEECSSE-EEEEES--TT--EEEEEESSCCTTCCCEEEECSCSSCE---------EEEEEC----SGGGCEEEEEET
T ss_pred eEEEEecCCc-EEEEeC--CC--eEEEEECCccccccceeeecCCCCce---------eEEEEC----CCCCCEEEEEec
Confidence 5678899987 444433 23 466777776 432 2221 122122 223343 3 4556667777
Q ss_pred CCeEEEEEEECC-----CCceEeeccCCc---------ceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 375 NGRSYLGILDDF-----GHSLSLLDIPFT---------DIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 375 ~g~~~ly~~d~~-----~g~~~~lt~~~~---------~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+|...||.++.. ......+..... .+..+ ..+++.+++.++.. ..++++|+.+++.
T Consensus 215 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~vwd~~~~~~ 285 (342)
T 1yfq_A 215 DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD---GIISCWNLQTRKK 285 (342)
T ss_dssp TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT---SCEEEEETTTTEE
T ss_pred CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC---ceEEEEcCccHhH
Confidence 888888877665 233444443322 56666 44455555555533 4688888887753
No 376
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.69 E-value=7.8e-06 Score=84.47 Aligned_cols=285 Identities=12% Similarity=0.051 Sum_probs=156.2
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccc-cccccCCceEEEECC-EEEEEECCCC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRT-TAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~i~~~~~~~~ 165 (729)
..+.+++|+| ++.+..+.. .++...+|...... ..... + .+. .-+...+.+..++++ ..+++...++
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s---~D~~i~vWd~~~~~--~~~~~-~----~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSAS---RDKTIIMWKLTRDE--TNYGI-P----QRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEE---TTSCEEEEEECCSS--SCSEE-E----EEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCEEEEEEeCCCCCEEEEEc---CCCeEEEEECCCCC--cccce-e----eEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 4567899999 677776655 45788888875441 11000 0 000 002223344455433 4556666788
Q ss_pred cEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee--CCCee
Q 004816 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS--GSDFY 243 (729)
Q Consensus 166 ~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~--~~~~~ 243 (729)
.|.+++... .......... ........++|+++.|+....+ ..+.++++.+.....+.. .....
T Consensus 109 ~i~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~l~s~s~d---------~~~~~~d~~~~~~~~~~~~~~~~~v 174 (340)
T 4aow_A 109 TLRLWDLTT--GTTTRRFVGH---TKDVLSVAFSSDNRQIVSGSRD---------KTIKLWNTLGVCKYTVQDESHSEWV 174 (340)
T ss_dssp EEEEEETTT--TEEEEEEECC---SSCEEEEEECTTSSCEEEEETT---------SCEEEECTTSCEEEEECSSSCSSCE
T ss_pred cceEEeecc--cceeeeecCC---CCceeEEEEeecCccceeecCC---------CeEEEEEeCCCceEEEEeccccCcc
Confidence 899999876 3322222111 2234556789999987765543 347777877554433321 23445
Q ss_pred eeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceE
Q 004816 244 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWN 323 (729)
Q Consensus 244 ~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~ 323 (729)
...+|++++...+++.... ...|.++|+. +++. ...+.+.. ..+..+.|+|||++++.... .+ .
T Consensus 175 ~~~~~~~~~~~~~~~s~~~------d~~i~i~d~~-~~~~--~~~~~~h~----~~v~~~~~s~~~~~l~s~s~-Dg--~ 238 (340)
T 4aow_A 175 SCVRFSPNSSNPIIVSCGW------DKLVKVWNLA-NCKL--KTNHIGHT----GYLNTVTVSPDGSLCASGGK-DG--Q 238 (340)
T ss_dssp EEEEECSCSSSCEEEEEET------TSCEEEEETT-TTEE--EEEECCCS----SCEEEEEECTTSSEEEEEET-TC--E
T ss_pred cceEEccCCCCcEEEEEcC------CCEEEEEECC-CCce--eeEecCCC----CcEEEEEECCCCCEEEEEeC-CC--e
Confidence 5678998876544444222 2348889988 6654 44555554 56677899999995555544 34 4
Q ss_pred EEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceE-eec--------
Q 004816 324 LHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLD-------- 394 (729)
Q Consensus 324 l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~-~lt-------- 394 (729)
|.++|+.+++..........+. .+.|. +++.++.. ..++...| +|++++... .+.
T Consensus 239 i~iwd~~~~~~~~~~~~~~~v~---------~~~~~----~~~~~~~~-~~d~~i~i--wd~~~~~~~~~~~~~~~~~~~ 302 (340)
T 4aow_A 239 AMLWDLNEGKHLYTLDGGDIIN---------ALCFS----PNRYWLCA-ATGPSIKI--WDLEGKIIVDELKQEVISTSS 302 (340)
T ss_dssp EEEEETTTTEEEEEEECSSCEE---------EEEEC----SSSSEEEE-EETTEEEE--EETTTTEEEEEECCC------
T ss_pred EEEEEeccCceeeeecCCceEE---------eeecC----CCCceeec-cCCCEEEE--EECCCCeEEEeccccceeeec
Confidence 6667887776554443222222 22333 33444433 34665444 477665432 221
Q ss_pred -cCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 395 -IPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 395 -~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
.....|..+ ..+++.+++.++.. ..|+++++++|+
T Consensus 303 ~~h~~~v~~l~~s~dg~~l~sgs~D---g~v~iW~~~tGt 339 (340)
T 4aow_A 303 KAEPPQCTSLAWSADGQTLFAGYTD---NLVRVWQVTIGT 339 (340)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEETT---SCEEEEEEEC--
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCC---CEEEEEeCCCcC
Confidence 122346666 44455566655543 356677777764
No 377
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.69 E-value=6.6e-06 Score=84.66 Aligned_cols=228 Identities=11% Similarity=0.047 Sum_probs=136.7
Q ss_pred EEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCC----Cc
Q 004816 157 VIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG----QN 232 (729)
Q Consensus 157 i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~----g~ 232 (729)
|+|.. ...|.++++++ .....+... ......+.|+++++.|+++... ...|+++++++ ..
T Consensus 4 ll~~~--~~~I~~i~~~~--~~~~~~~~~----~~~p~g~~~d~~~~~ly~~D~~--------~~~I~~~~~~g~~~~~~ 67 (316)
T 1ijq_A 4 LFFTN--RHEVRKMTLDR--SEYTSLIPN----LRNVVALDTEVASNRIYWSDLS--------QRMICSTQLDRAHGVSS 67 (316)
T ss_dssp EEEEC--BSSEEEEETTS--CCCEEEECS----CSSEEEEEEETTTTEEEEEETT--------TTEEEEEEC--------
T ss_pred EEEEC--CCeEEEEECCC--cceEehhcC----CCceEEEEEEeCCCEEEEEECC--------CCcEEEEECCCCCCCcc
Confidence 56664 34699999987 655554433 2334678899999887776443 25799999987 33
Q ss_pred eEEeee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-
Q 004816 233 IQVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE- 310 (729)
Q Consensus 233 ~~~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~- 310 (729)
.+.+.. +.....+.+++++++.|+|+... ...|.+++++ +... ..+..... .....++..|++.
T Consensus 68 ~~~~~~~~~~~p~glavd~~~~~ly~~d~~-------~~~I~~~~~~-g~~~--~~~~~~~~----~~P~~iavdp~~g~ 133 (316)
T 1ijq_A 68 YDTVISRDIQAPDGLAVDWIHSNIYWTDSV-------LGTVSVADTK-GVKR--KTLFRENG----SKPRAIVVDPVHGF 133 (316)
T ss_dssp CEEEECSSCSCCCEEEEETTTTEEEEEETT-------TTEEEEEETT-SSSE--EEEEECTT----CCEEEEEEETTTTE
T ss_pred cEEEEeCCCCCcCEEEEeecCCeEEEEECC-------CCEEEEEeCC-CCce--EEEEECCC----CCcceEEeCCCCCE
Confidence 344432 33344677888888889888632 3469999987 3332 22333221 3445677888666
Q ss_pred EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce
Q 004816 311 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 390 (729)
Q Consensus 311 l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~ 390 (729)
|||. +. .....|+++++++...+.+.... + .| .+.+.+.+ +++.|||+.. +...|+++++++...
T Consensus 134 ly~~-d~-~~~~~I~~~~~dG~~~~~~~~~~--~---~~---P~gla~d~---~~~~lY~~D~--~~~~I~~~d~dg~~~ 198 (316)
T 1ijq_A 134 MYWT-DW-GTPAKIKKGGLNGVDIYSLVTEN--I---QW---PNGITLDL---LSGRLYWVDS--KLHSISSIDVNGGNR 198 (316)
T ss_dssp EEEE-EC-SSSCEEEEEETTSCCEEEEECSS--C---SC---EEEEEEET---TTTEEEEEET--TTTEEEEEETTSCSC
T ss_pred EEEE-cc-CCCCeEEEEcCCCCCeEEEEECC--C---CC---ceEEEEec---cCCEEEEEEC--CCCeEEEEecCCCce
Confidence 6655 43 22368999999876655554321 1 11 12334432 5778888753 445789999988776
Q ss_pred EeeccC---CcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 391 SLLDIP---FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 391 ~~lt~~---~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
+.+... ......+..+++.+++... ....|++++..+|+
T Consensus 199 ~~~~~~~~~~~~P~giav~~~~ly~~d~---~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 199 KTILEDEKRLAHPFSLAVFEDKVFWTDI---INEAIFSANRLTGS 240 (316)
T ss_dssp EEEEECTTTTSSEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred EEEeecCCccCCcEEEEEECCEEEEEEC---CCCeEEEEeCCCCc
Confidence 655432 2223455445666666442 23578888876554
No 378
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.69 E-value=3.5e-06 Score=88.49 Aligned_cols=243 Identities=9% Similarity=0.008 Sum_probs=140.4
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC---CEEEEEECCC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG---DTVIFSNYKD 164 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~ 164 (729)
..+..+.|+| ++.++.-. .++...+|...... +.....+.. +.....+..++. +.++++...+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~----~dg~i~iw~~~~~~-~~~~~~~~~--------h~~~v~~~~~~~~~~~~~l~s~~~d 78 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCS----SDKTIKIFEVEGET-HKLIDTLTG--------HEGPVWRVDWAHPKFGTILASCSYD 78 (379)
T ss_dssp CCEEEEEECSSSSEEEEEE----TTSCEEEEEEETTE-EEEEEEECC--------CSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ccEEEEEEcCCCCEEEEEE----CCCcEEEEecCCCc-ceeeeEecC--------CCCcEEEEEeCCCCCCCEEEEeccC
Confidence 3567889999 66554432 35777888765321 111111111 111233344431 3556666678
Q ss_pred CcEEEEeCCCCCCC---CeecCCCCCCCceeeecceecCC--CCEEEEEEeccCCCCCCcceEEEEEEcCCCc---eEEe
Q 004816 165 QRLYKHSIDSKDSS---PLPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQN---IQVL 236 (729)
Q Consensus 165 ~~l~~~d~~~~~~~---~~~lt~~~~~~~~~~~~~~~SPd--G~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~---~~~l 236 (729)
+.|.+||+.+ ++ ...+... ...+...+|+|+ |+.|+....+ ..|.++|+.++. ...+
T Consensus 79 g~v~iwd~~~--~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~~d---------~~i~v~d~~~~~~~~~~~~ 143 (379)
T 3jrp_A 79 GKVLIWKEEN--GRWSQIAVHAVH----SASVNSVQWAPHEYGPLLLVASSD---------GKVSVVEFKENGTTSPIII 143 (379)
T ss_dssp SCEEEEEEET--TEEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------SEEEEEECCTTSCCCEEEE
T ss_pred CEEEEEEcCC--CceeEeeeecCC----CcceEEEEeCCCCCCCEEEEecCC---------CcEEEEecCCCCceeeEEe
Confidence 8999999987 53 2333333 345688899999 8887766553 468889988763 2333
Q ss_pred eeCCCeeeeeeeCC-------------CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe--eeeEEecCCCCCcccccc
Q 004816 237 VSGSDFYAFPRMDP-------------RGERMAWIEWHHPNMPWDKAELWVGYISENGDV--YKRVCVAGFDPTIVESPT 301 (729)
Q Consensus 237 t~~~~~~~~~~~SP-------------DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~--~~~~~~~~~~~~~~~~~~ 301 (729)
...........|+| |++.|+.... ...|+++|+. ++.. .....+.+.. ..+.
T Consensus 144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------dg~i~i~d~~-~~~~~~~~~~~~~~h~----~~v~ 210 (379)
T 3jrp_A 144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA--------DNLVKIWKYN-SDAQTYVLESTLEGHS----DWVR 210 (379)
T ss_dssp ECCTTCEEEEEECCCC----------CTTCEEEEEET--------TSCEEEEEEE-TTTTEEEEEEEECCCS----SCEE
T ss_pred cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeC--------CCeEEEEEec-CCCcceeeEEEEeccc----CcEe
Confidence 44455677889999 7998877662 2348889987 4432 1223444444 5667
Q ss_pred CceeCCC---CcEEEEEecCCCceEEEEEEcCCCe---EEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEEC
Q 004816 302 EPKWSSK---GELFFVTDRKNGFWNLHKWIESNNE---VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 375 (729)
Q Consensus 302 ~~~wspD---G~l~~~~~~~~g~~~l~~~d~~~g~---~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~ 375 (729)
.+.|+|| |++++.... .+. |.++|+.+++ ...+.... ...... ..+.|.+ +++. +++...+
T Consensus 211 ~~~~sp~~~~~~~l~s~~~-dg~--i~iwd~~~~~~~~~~~~~~~~-~~~~~v-----~~~~~s~---~g~~-l~~~~~d 277 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASVSQ-DRT--CIIWTQDNEQGPWKKTLLKEE-KFPDVL-----WRASWSL---SGNV-LALSGGD 277 (379)
T ss_dssp EEEECCCCSSSEEEEEEET-TSC--EEEEEESSTTSCCEEEESSSS-CCSSCE-----EEEEECS---SSCC-EEEEESS
T ss_pred EEEECCCCCCCCeEEEEeC-CCE--EEEEeCCCCCccceeeeeccc-cCCCcE-----EEEEEcC---CCCE-EEEecCC
Confidence 8899999 775555554 454 4455665553 22222111 111111 1233432 5554 4455568
Q ss_pred CeEEEEEEEC
Q 004816 376 GRSYLGILDD 385 (729)
Q Consensus 376 g~~~ly~~d~ 385 (729)
|..++|.++.
T Consensus 278 g~i~iw~~~~ 287 (379)
T 3jrp_A 278 NKVTLWKENL 287 (379)
T ss_dssp SSEEEEEEEE
T ss_pred CcEEEEeCCC
Confidence 8888888765
No 379
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.68 E-value=1.1e-06 Score=95.05 Aligned_cols=199 Identities=12% Similarity=0.045 Sum_probs=118.2
Q ss_pred CCceEEEECC--EEEEEECCCCcEEEEeCCCC---------CCCCeecCCCCCCCceeeecceecCCCC-EEEEEEeccC
Q 004816 146 GGGAFRIFGD--TVIFSNYKDQRLYKHSIDSK---------DSSPLPITPDYGEPLVSYADGIFDPRFN-RYVTVREDRR 213 (729)
Q Consensus 146 ~~~~~~~~~~--~i~~~~~~~~~l~~~d~~~~---------~~~~~~lt~~~~~~~~~~~~~~~SPdG~-~l~~~~~~~~ 213 (729)
....+.++++ .++++...++.|++|++... ......+... ...+...+|+|+++ .|+.. ...
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~-~~d- 203 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH----QKEGYGLSWNPNLNGYLLSA-SDD- 203 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC----SSCCCCEEECTTSTTEEEEE-CTT-
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC----CCCeEEEEeCCCCCCeEEEE-eCC-
Confidence 4455566654 57777777889999998640 0122222222 23457789999999 54444 322
Q ss_pred CCCCCcceEEEEEEcCCCc--------eEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCC-ee
Q 004816 214 QDALNSTTEIVAIALNGQN--------IQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD-VY 284 (729)
Q Consensus 214 ~~~~~~~~~l~~~dl~~g~--------~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~-~~ 284 (729)
..|.++++.++. ...+..........+|+|++..++++... ...|+++|+. ++. ..
T Consensus 204 -------g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~-------dg~i~i~d~~-~~~~~~ 268 (430)
T 2xyi_A 204 -------HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD-------DQKLMIWDTR-NNNTSK 268 (430)
T ss_dssp -------SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET-------TSEEEEEETT-CSCSSS
T ss_pred -------CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC-------CCeEEEEECC-CCCCCc
Confidence 458888988632 12233334456778999955555444422 3459999998 442 12
Q ss_pred eeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCC-e-EEEeeccCccccCCcccccCcceeeeee
Q 004816 285 KRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN-E-VLAIYSLDAEFSRPLWVFGINSYEIIQS 361 (729)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g-~-~~~l~~~~~~~~~~~w~~~~~~~~~l~~ 361 (729)
....+.... ..+..+.|+|+++ ++++... .+. |.++|+.+. + ...+......+....|++
T Consensus 269 ~~~~~~~~~----~~v~~i~~~p~~~~~l~tg~~-dg~--v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp---------- 331 (430)
T 2xyi_A 269 PSHTVDAHT----AEVNCLSFNPYSEFILATGSA-DKT--VALWDLRNLKLKLHSFESHKDEIFQVQWSP---------- 331 (430)
T ss_dssp CSEEEECCS----SCEEEEEECSSCTTEEEEEET-TSE--EEEEETTCTTSCSEEEECCSSCEEEEEECS----------
T ss_pred ceeEeecCC----CCeEEEEeCCCCCCEEEEEeC-CCe--EEEEeCCCCCCCeEEeecCCCCEEEEEECC----------
Confidence 233444444 5667889999998 7777665 454 666677652 2 233332333333334443
Q ss_pred cCCCCEEEEEEEECCeEEEEEEE
Q 004816 362 HGEKNLIACSYRQNGRSYLGILD 384 (729)
Q Consensus 362 ~~~~~~l~~~s~~~g~~~ly~~d 384 (729)
+++.++++...++...||-+.
T Consensus 332 --~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 332 --HNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp --SCTTEEEEEETTSCCEEEEGG
T ss_pred --CCCCEEEEEeCCCcEEEEeCC
Confidence 666777788778877777554
No 380
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.67 E-value=2.4e-06 Score=90.82 Aligned_cols=157 Identities=11% Similarity=0.073 Sum_probs=98.3
Q ss_pred CceEEEEC--CEEEEEECCCCcEEEEeCCCCCCCCeecCC----------CCCCCceeeecceecC-CCCEEEEEEeccC
Q 004816 147 GGAFRIFG--DTVIFSNYKDQRLYKHSIDSKDSSPLPITP----------DYGEPLVSYADGIFDP-RFNRYVTVREDRR 213 (729)
Q Consensus 147 ~~~~~~~~--~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~----------~~~~~~~~~~~~~~SP-dG~~l~~~~~~~~ 213 (729)
+.+..+++ +.++++...++.|.+|++.+ +....... ........+...+|+| +++.|+....+
T Consensus 46 v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-- 121 (408)
T 4a11_B 46 INTLDIEPVEGRYMLSGGSDGVIVLYDLEN--SSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD-- 121 (408)
T ss_dssp EEEEEECTTTCCEEEEEETTSCEEEEECCC--CSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT--
T ss_pred EEEEEEecCCCCEEEEEcCCCeEEEEECCC--CcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC--
Confidence 33444543 35566666788999999987 43222111 0000134567889999 56655544332
Q ss_pred CCCCCcceEEEEEEcCCCceEEeeeCCCeeeeeeeCC---CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEec
Q 004816 214 QDALNSTTEIVAIALNGQNIQVLVSGSDFYAFPRMDP---RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA 290 (729)
Q Consensus 214 ~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~~~SP---DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~ 290 (729)
..|.++++.+++...............|+| +++.|+... . ...|.++|+. +++. ...+.
T Consensus 122 -------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~v~~~d~~-~~~~--~~~~~ 183 (408)
T 4a11_B 122 -------KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGT-R-------GPKVQLCDLK-SGSC--SHILQ 183 (408)
T ss_dssp -------SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEE-S-------SSSEEEEESS-SSCC--CEEEC
T ss_pred -------CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEc-C-------CCeEEEEeCC-Ccce--eeeec
Confidence 469999999987766655555556677777 444666555 2 2349999998 5654 44555
Q ss_pred CCCCCccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCC
Q 004816 291 GFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN 332 (729)
Q Consensus 291 ~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g 332 (729)
... ..+..+.|+|+++ +++.... .+. |.++|+.++
T Consensus 184 ~~~----~~v~~~~~~~~~~~ll~~~~~-dg~--i~i~d~~~~ 219 (408)
T 4a11_B 184 GHR----QEILAVSWSPRYDYILATASA-DSR--VKLWDVRRA 219 (408)
T ss_dssp CCC----SCEEEEEECSSCTTEEEEEET-TSC--EEEEETTCS
T ss_pred CCC----CcEEEEEECCCCCcEEEEEcC-CCc--EEEEECCCC
Confidence 554 5667889999998 7777665 454 555566554
No 381
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.67 E-value=2e-05 Score=80.11 Aligned_cols=250 Identities=8% Similarity=-0.017 Sum_probs=137.9
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCC-cccCCCCCcccccccccCCceEEEEC---CEEEEEECCC
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEP-SDITPKEYAVRTTAQEYGGGAFRIFG---DTVIFSNYKD 164 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~ 164 (729)
.+..++|+| |+.++- .. .++...||..... .++. ..+.. |.....+..++. +.++++...+
T Consensus 11 ~V~~~~~s~~g~~las-~s---~D~~v~iw~~~~~-~~~~~~~l~g---------H~~~V~~v~~s~~~~g~~l~s~s~D 76 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMAT-CS---SDKTIKIFEVEGE-THKLIDTLTG---------HEGPVWRVDWAHPKFGTILASCSYD 76 (297)
T ss_dssp CEEEEEECTTSSEEEE-EE---TTSCEEEEEBCSS-CBCCCEEECC---------CSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ceEEEEECCCCCEEEE-Ee---CCCEEEEEecCCC-CcEEEEEEcc---------ccCCeEEEEecCCCcCCEEEEEcCC
Confidence 456789999 665443 32 4577788876432 1111 11111 111223334432 4566777778
Q ss_pred CcEEEEeCCCCCCCCe---ecCCCCCCCceeeecceecCC--CCEEEEEEeccCCCCCCcceEEEEEEcCCCc---eEEe
Q 004816 165 QRLYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQN---IQVL 236 (729)
Q Consensus 165 ~~l~~~d~~~~~~~~~---~lt~~~~~~~~~~~~~~~SPd--G~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~---~~~l 236 (729)
+.|.+||+.+ +... .+... ...+...+|+|+ |+.|+....+ ..|.++++.++. ...+
T Consensus 77 ~~v~iWd~~~--~~~~~~~~~~~h----~~~v~~v~~~p~~~g~~l~s~s~d---------~~v~~wd~~~~~~~~~~~~ 141 (297)
T 2pm7_B 77 GKVMIWKEEN--GRWSQIAVHAVH----SASVNSVQWAPHEYGPMLLVASSD---------GKVSVVEFKENGTTSPIII 141 (297)
T ss_dssp TEEEEEEBSS--SCBCCCEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------SEEEEEEBCSSSCBCCEEE
T ss_pred CEEEEEEcCC--CceEEEEEeecC----CCceeEEEeCcCCCCcEEEEEECC---------CcEEEEEecCCCceeeeee
Confidence 8999999986 5322 22222 345678899998 8876655543 468888887653 2333
Q ss_pred eeCCCeeeeeeeCCC-------------CCeEEEEEecCCCCCCCCcEEEEEEecCCCCe--eeeEEecCCCCCcccccc
Q 004816 237 VSGSDFYAFPRMDPR-------------GERMAWIEWHHPNMPWDKAELWVGYISENGDV--YKRVCVAGFDPTIVESPT 301 (729)
Q Consensus 237 t~~~~~~~~~~~SPD-------------G~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~--~~~~~~~~~~~~~~~~~~ 301 (729)
..........+|+|+ ++.|+..+. ...|.++|+. ++.. .....+.+.. ..+.
T Consensus 142 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~--------D~~v~lwd~~-~~~~~~~~~~~l~~H~----~~V~ 208 (297)
T 2pm7_B 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA--------DNLVKIWKYN-SDAQTYVLESTLEGHS----DWVR 208 (297)
T ss_dssp ECCSSCEEEEEECCCC------------CCEEEEEET--------TSCEEEEEEE-TTTTEEEEEEEECCCS----SCEE
T ss_pred ecccCccceEeecCCcccccccCCCCCCcceEEEEcC--------CCcEEEEEEc-CCCceEEEEEEecCCC----CceE
Confidence 334445667899997 466665542 2348888887 4441 1233455554 5677
Q ss_pred CceeCCCC---cEEEEEecCCCceEEEEEEcCCCe-EEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCe
Q 004816 302 EPKWSSKG---ELFFVTDRKNGFWNLHKWIESNNE-VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR 377 (729)
Q Consensus 302 ~~~wspDG---~l~~~~~~~~g~~~l~~~d~~~g~-~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~ 377 (729)
.++|+||+ +++..... .+.-.||-++...+. ...+.... ......| .+.|.+ +++ ++++...++.
T Consensus 209 ~v~~sp~~~~~~~las~s~-D~~v~iWd~~~~~~~~~~~~~~~~-~~~~~v~-----~~~~s~---~g~-~las~~~D~~ 277 (297)
T 2pm7_B 209 DVAWSPTVLLRSYMASVSQ-DRTCIIWTQDNEQGPWKKTLLKEE-KFPDVLW-----RASWSL---SGN-VLALSGGDNK 277 (297)
T ss_dssp EEEECCCCSSSEEEEEEET-TSCEEEEEESSTTSCCEEEESSSS-CCSSCEE-----EEEECS---SSC-CEEEEETTSC
T ss_pred EEEECCCCCCceEEEEEEC-CCcEEEEEeCCCCCccceeeeecc-cCCCcEE-----EEEECC---CCC-EEEEEcCCCc
Confidence 89999996 44444444 455556544322222 12222111 1112222 234442 544 4556667888
Q ss_pred EEEEEEECCCCceEee
Q 004816 378 SYLGILDDFGHSLSLL 393 (729)
Q Consensus 378 ~~ly~~d~~~g~~~~l 393 (729)
.+||..+.+ |.++.+
T Consensus 278 v~lw~~~~~-g~w~~~ 292 (297)
T 2pm7_B 278 VTLWKENLE-GKWEPA 292 (297)
T ss_dssp EEEEEECTT-SCEEEC
T ss_pred EEEEEECCC-CcEEec
Confidence 899987654 444433
No 382
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.66 E-value=1.4e-06 Score=89.71 Aligned_cols=206 Identities=10% Similarity=0.085 Sum_probs=125.1
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCC---CCCcccCCCCCcccccccccCCceEEEECCEEEEEECCC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAG---DEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD 164 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~---g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 164 (729)
..+.++.|++ ++.+||++.. .+ .|++.+.++. .....+++.. +....+.++.+.++.|++.+...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~---~~--~I~~~~~~g~~~~~~~~~~~~~~------~~~p~glavd~~~~~ly~~d~~~ 98 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLS---QR--MICSTQLDRAHGVSSYDTVISRD------IQAPDGLAVDWIHSNIYWTDSVL 98 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETT---TT--EEEEEEC--------CEEEECSS------CSCCCEEEEETTTTEEEEEETTT
T ss_pred CceEEEEEEeCCCEEEEEECC---CC--cEEEEECCCCCCCcccEEEEeCC------CCCcCEEEEeecCCeEEEEECCC
Confidence 4678999999 8999999863 23 4666665520 1222232211 11222333333467888988878
Q ss_pred CcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee-CCCee
Q 004816 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS-GSDFY 243 (729)
Q Consensus 165 ~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~-~~~~~ 243 (729)
+.|.++++++ ...+.+.... .....+.+++|++.+|+++.... ...|+++++++...+.+.. ....-
T Consensus 99 ~~I~~~~~~g--~~~~~~~~~~---~~~P~~iavdp~~g~ly~~d~~~-------~~~I~~~~~dG~~~~~~~~~~~~~P 166 (316)
T 1ijq_A 99 GTVSVADTKG--VKRKTLFREN---GSKPRAIVVDPVHGFMYWTDWGT-------PAKIKKGGLNGVDIYSLVTENIQWP 166 (316)
T ss_dssp TEEEEEETTS--SSEEEEEECT---TCCEEEEEEETTTTEEEEEECSS-------SCEEEEEETTSCCEEEEECSSCSCE
T ss_pred CEEEEEeCCC--CceEEEEECC---CCCcceEEeCCCCCEEEEEccCC-------CCeEEEEcCCCCCeEEEEECCCCCc
Confidence 8999999986 5555444321 23457888999888877664321 2579999998766665543 34456
Q ss_pred eeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceE
Q 004816 244 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWN 323 (729)
Q Consensus 244 ~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~ 323 (729)
.+.+|+|++++|+|+... ...|+++|++ +... ..+....... .....++.. ++.+|++ +. +...
T Consensus 167 ~gla~d~~~~~lY~~D~~-------~~~I~~~d~d-g~~~--~~~~~~~~~~--~~P~giav~-~~~ly~~-d~--~~~~ 230 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDSK-------LHSISSIDVN-GGNR--KTILEDEKRL--AHPFSLAVF-EDKVFWT-DI--INEA 230 (316)
T ss_dssp EEEEEETTTTEEEEEETT-------TTEEEEEETT-SCSC--EEEEECTTTT--SSEEEEEEE-TTEEEEE-ET--TTTE
T ss_pred eEEEEeccCCEEEEEECC-------CCeEEEEecC-CCce--EEEeecCCcc--CCcEEEEEE-CCEEEEE-EC--CCCe
Confidence 788999999999988732 3469999987 3332 2222221100 223344552 2336554 44 4467
Q ss_pred EEEEEcCCCe
Q 004816 324 LHKWIESNNE 333 (729)
Q Consensus 324 l~~~d~~~g~ 333 (729)
|.+++..+|+
T Consensus 231 V~~~~~~~g~ 240 (316)
T 1ijq_A 231 IFSANRLTGS 240 (316)
T ss_dssp EEEEETTTCC
T ss_pred EEEEeCCCCc
Confidence 8999886654
No 383
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.66 E-value=3e-08 Score=106.31 Aligned_cols=111 Identities=11% Similarity=-0.049 Sum_probs=76.1
Q ss_pred CCCCEEEEEcCCCCCCccccchh-hhHHH-hhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCC
Q 004816 490 EKPPLLVKSHGGPTSEARGILNL-SIQYW-TSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 567 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~~~~~~~-~~~~l-a~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 567 (729)
...|+||++||...+. ...|.. .+..| ...+|.|+++|++|.+... +..... +. ....+++...+++|.++..
T Consensus 67 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~~-~~-~~v~~~la~ll~~L~~~~g 141 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKSGSRTA--YSQASQ-NV-RIVGAEVAYLVGVLQSSFD 141 (449)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHHHHSSC--HHHHHH-HH-HHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCcccCCc--cHHHHH-HH-HHHHHHHHHHHHHHHHhcC
Confidence 3458999999975432 223443 44555 4569999999999754432 111110 00 0114567778888865434
Q ss_pred CCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEecccc
Q 004816 568 ADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVA 605 (729)
Q Consensus 568 ~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~ 605 (729)
++.+++.|+|||+||.+|+.++. +|++++.++.+.|..
T Consensus 142 ~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 142 YSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 56789999999999999999998 899999999888753
No 384
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.66 E-value=5e-06 Score=86.64 Aligned_cols=227 Identities=10% Similarity=0.008 Sum_probs=127.2
Q ss_pred CEEEEEECCCCcEEEEeCCCCCCC--------CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEE
Q 004816 155 DTVIFSNYKDQRLYKHSIDSKDSS--------PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (729)
Q Consensus 155 ~~i~~~~~~~~~l~~~d~~~~~~~--------~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~ 226 (729)
+.++++...++.|.+|++.. ++ ...+... ...+...+|+|||+.++....+ ..|.++
T Consensus 39 ~~~l~sgs~D~~v~iWd~~~--~~~~~~~~~~~~~l~~h----~~~V~~~~~~~~~~~l~s~s~D---------~~v~lw 103 (343)
T 2xzm_R 39 SPVLISGSRDKTVMIWKLYE--EEQNGYFGIPHKALTGH----NHFVSDLALSQENCFAISSSWD---------KTLRLW 103 (343)
T ss_dssp CCEEEEEETTSCEEEEEECS--SCCSSBSEEEEEEECCC----SSCEEEEEECSSTTEEEEEETT---------SEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCc--CCcccccccccchhccC----CCceEEEEECCCCCEEEEEcCC---------CcEEEE
Confidence 35666777788899999864 22 1223333 3456788999999987655543 468899
Q ss_pred EcCCCceE-EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEec--CCCCCccccccCc
Q 004816 227 ALNGQNIQ-VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA--GFDPTIVESPTEP 303 (729)
Q Consensus 227 dl~~g~~~-~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~--~~~~~~~~~~~~~ 303 (729)
|+.+++.. .+..........+|||||++|+-.+. ...|.++|+. +... ..... +.. ..+..+
T Consensus 104 d~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~--------d~~i~~wd~~-~~~~--~~~~~~~~~~----~~v~~~ 168 (343)
T 2xzm_R 104 DLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA--------EREIKLWNIL-GECK--FSSAEKENHS----DWVSCV 168 (343)
T ss_dssp ETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET--------TSCEEEEESS-SCEE--EECCTTTSCS----SCEEEE
T ss_pred ECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC--------CCEEEEEecc-CCce--eeeecccCCC----ceeeee
Confidence 99987754 44444556778899999999886652 2348888886 3221 11111 222 345567
Q ss_pred eeCCCC----------cEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEE
Q 004816 304 KWSSKG----------ELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR 373 (729)
Q Consensus 304 ~wspDG----------~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~ 373 (729)
.|+|++ .+++.... .+ .|.++|........+......+.. +.|.+ +++ ++++..
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~-d~--~i~iwd~~~~~~~~~~~h~~~v~~---------~~~s~---~g~-~l~sgs 232 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGW-DG--RLKVWNTNFQIRYTFKAHESNVNH---------LSISP---NGK-YIATGG 232 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEET-TS--EEEEEETTTEEEEEEECCSSCEEE---------EEECT---TSS-EEEEEE
T ss_pred eeccccccccccCCCCCEEEEEcC-CC--EEEEEcCCCceeEEEcCccccceE---------EEECC---CCC-EEEEEc
Confidence 788886 44444443 34 455556443333333333322323 33432 554 555666
Q ss_pred ECCeEEEEEEECCCCc-eEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 374 QNGRSYLGILDDFGHS-LSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 374 ~~g~~~ly~~d~~~g~-~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
.+|...||-+. ..+. ...+. ....+..+ ..+++.++..+. . ..+.++++.+++.
T Consensus 233 ~dg~v~iwd~~-~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~~-d---~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 233 KDKKLLIWDIL-NLTYPQREFD-AGSTINQIAFNPKLQWVAVGT-D---QGVKIFNLMTQSK 288 (343)
T ss_dssp TTCEEEEEESS-CCSSCSEEEE-CSSCEEEEEECSSSCEEEEEE-S---SCEEEEESSSCCS
T ss_pred CCCeEEEEECC-CCcccceeec-CCCcEEEEEECCCCCEEEEEC-C---CCEEEEEeCCCCC
Confidence 77876666431 2222 22222 22346666 444455554332 2 2467777776653
No 385
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.65 E-value=3.2e-08 Score=106.12 Aligned_cols=110 Identities=11% Similarity=-0.025 Sum_probs=74.3
Q ss_pred CCCCEEEEEcCCCCCCccccchh-hhHHHhh-CCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCC
Q 004816 490 EKPPLLVKSHGGPTSEARGILNL-SIQYWTS-RGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 567 (729)
Q Consensus 490 ~~~P~vv~~hGg~~~~~~~~~~~-~~~~la~-~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 567 (729)
...|+||++||...+. ...|.. ....+.+ .+|.|+++|++|.+... +...... -....+|+...+++|.++..
T Consensus 68 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~~~--~~~~a~~l~~ll~~L~~~~g 142 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKGSQTS--YTQAANN--VRVVGAQVAQMLSMLSANYS 142 (450)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC--HHHHHHH--HHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccccCCc--chHHHHH--HHHHHHHHHHHHHHHHHhcC
Confidence 3468999999975433 223433 4455555 48999999999743321 1111100 00125677788888864433
Q ss_pred CCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEecccc
Q 004816 568 ADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGVA 605 (729)
Q Consensus 568 ~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~~ 605 (729)
++.+++.|+||||||.+|+.++. +|+ ++.++.+.|..
T Consensus 143 ~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 143 YSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred CChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 56789999999999999999988 888 99999887753
No 386
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.65 E-value=8.3e-06 Score=84.01 Aligned_cols=241 Identities=9% Similarity=-0.029 Sum_probs=133.5
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCcEE
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRLY 168 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~l~ 168 (729)
.+..+.|+|++....... .++...+|....+ +....+.. +.....+..++++ .++++...++.|.
T Consensus 67 ~v~~~~~s~dg~~l~s~s---~D~~v~~wd~~~~---~~~~~~~~--------h~~~v~~~~~~~~~~~l~s~s~D~~i~ 132 (319)
T 3frx_A 67 IVQDCTLTADGAYALSAS---WDKTLRLWDVATG---ETYQRFVG--------HKSDVMSVDIDKKASMIISGSRDKTIK 132 (319)
T ss_dssp CEEEEEECTTSSEEEEEE---TTSEEEEEETTTT---EEEEEEEC--------CSSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred cEEEEEECCCCCEEEEEe---CCCEEEEEECCCC---CeeEEEcc--------CCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 456778898333333333 3577777765432 22111111 1112333444433 4566666788899
Q ss_pred EEeCCCCCCCCeecCCCCCCCceeeecceecCCC------CEEEEEEeccCCCCCCcceEEEEEEcCCCceEE-eeeCCC
Q 004816 169 KHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRF------NRYVTVREDRRQDALNSTTEIVAIALNGQNIQV-LVSGSD 241 (729)
Q Consensus 169 ~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG------~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~-lt~~~~ 241 (729)
+|++.+ .....+... ...+....|+|++ ..|+....+ ..|.++|+.+++... +.....
T Consensus 133 vwd~~~--~~~~~~~~h----~~~v~~~~~~~~~~~~~~~~~l~s~~~d---------~~i~~wd~~~~~~~~~~~~h~~ 197 (319)
T 3frx_A 133 VWTIKG--QCLATLLGH----NDWVSQVRVVPNEKADDDSVTIISAGND---------KMVKAWNLNQFQIEADFIGHNS 197 (319)
T ss_dssp EEETTS--CEEEEECCC----SSCEEEEEECCC------CCEEEEEETT---------SCEEEEETTTTEEEEEECCCCS
T ss_pred EEECCC--CeEEEEecc----CCcEEEEEEccCCCCCCCccEEEEEeCC---------CEEEEEECCcchhheeecCCCC
Confidence 999986 555555443 2445667788854 355444332 458888998876543 333445
Q ss_pred eeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCc
Q 004816 242 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGF 321 (729)
Q Consensus 242 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~ 321 (729)
.....+|||||++|+-.+ ....|.++|+. +++. ...+... ..+..++|+|||.++..... +.
T Consensus 198 ~v~~~~~sp~g~~l~s~~--------~dg~i~iwd~~-~~~~--~~~~~~~-----~~v~~~~~sp~~~~la~~~~--~~ 259 (319)
T 3frx_A 198 NINTLTASPDGTLIASAG--------KDGEIMLWNLA-AKKA--MYTLSAQ-----DEVFSLAFSPNRYWLAAATA--TG 259 (319)
T ss_dssp CEEEEEECTTSSEEEEEE--------TTCEEEEEETT-TTEE--EEEEECC-----SCEEEEEECSSSSEEEEEET--TE
T ss_pred cEEEEEEcCCCCEEEEEe--------CCCeEEEEECC-CCcE--EEEecCC-----CcEEEEEEcCCCCEEEEEcC--CC
Confidence 667789999999988666 23459999998 5654 3333333 34567899999994444443 22
Q ss_pred eEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEE
Q 004816 322 WNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 384 (729)
Q Consensus 322 ~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d 384 (729)
+.+++.+++...... ...... ..........+.|.| +++ ++++...+|..+||.+.
T Consensus 260 --i~v~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~sp---dg~-~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 260 --IKVFSLDPQYLVDDLRPEFAGY-SKAAEPHAVSLAWSA---DGQ-TLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp --EEEEEETTEEEEEEECCCCTTC-CGGGCCCEEEEEECT---TSS-EEEEEETTSCEEEEEEE
T ss_pred --cEEEEeCcCeeeeccCcccccc-ccCcCcceeEEEECC---CCC-EEEEeecCceEEEEEEe
Confidence 445555554432222 111000 000011112345553 555 44566678888888664
No 387
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.64 E-value=2.8e-06 Score=91.80 Aligned_cols=212 Identities=8% Similarity=0.063 Sum_probs=122.5
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCc
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQR 166 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~ 166 (729)
..+.++.|+| ++.+++... .++...+|-.... ..+.+.... .. .....++.++.+ .++++...++.
T Consensus 165 ~~V~~l~f~p~~~~~l~s~s---~D~~v~iwd~~~~---~~~~~~~~~-~~-----~~~~~~~~~~~~~~~l~~g~~dg~ 232 (435)
T 4e54_B 165 GSITGLKFNPLNTNQFYASS---MEGTTRLQDFKGN---ILRVFASSD-TI-----NIWFCSLDVSASSRMVVTGDNVGN 232 (435)
T ss_dssp CCCCEEEECSSCTTEEEEEC---SSSCEEEEETTSC---EEEEEECCS-SC-----SCCCCCEEEETTTTEEEEECSSSB
T ss_pred CCEEEEEEeCCCCCEEEEEe---CCCEEEEeeccCC---ceeEEeccC-CC-----CccEEEEEECCCCCEEEEEeCCCc
Confidence 3567889998 666666554 3567777755321 222222111 00 111233445433 45666667889
Q ss_pred EEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE-Eee---eCCCe
Q 004816 167 LYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-VLV---SGSDF 242 (729)
Q Consensus 167 l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~-~lt---~~~~~ 242 (729)
|.+||+.+ .....+... ...+...+|+|+++.++++...+ ..|.++|+.+++.. .+. .....
T Consensus 233 i~~wd~~~--~~~~~~~~h----~~~v~~v~~~p~~~~~~~s~s~d--------~~v~iwd~~~~~~~~~~~~~~~h~~~ 298 (435)
T 4e54_B 233 VILLNMDG--KELWNLRMH----KKKVTHVALNPCCDWFLATASVD--------QTVKIWDLRQVRGKASFLYSLPHRHP 298 (435)
T ss_dssp EEEEESSS--CBCCCSBCC----SSCEEEEEECTTCSSEEEEEETT--------SBCCEEETTTCCSSSCCSBCCBCSSC
T ss_pred EeeeccCc--ceeEEEecc----cceEEeeeecCCCceEEEEecCc--------ceeeEEecccccccceEEEeeecccc
Confidence 99999986 655555544 34577889999998776665443 35777888765432 221 22345
Q ss_pred eeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCC-CCccccccCceeCCCCc-EEEEEecCCC
Q 004816 243 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD-PTIVESPTEPKWSSKGE-LFFVTDRKNG 320 (729)
Q Consensus 243 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~-~~~~~~~~~~~wspDG~-l~~~~~~~~g 320 (729)
....+|||||++|+..+. ...|.++|+. ++... ..+..... ..-........|+|++. ++..... .+
T Consensus 299 v~~~~~spdg~~l~s~~~--------D~~i~iwd~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~ 367 (435)
T 4e54_B 299 VNAACFSPDGARLLTTDQ--------KSEIRVYSAS-QWDCP-LGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYP-DP 367 (435)
T ss_dssp EEECCBCTTSSEEEEEES--------SSCEEEEESS-SSSSE-EEECCCCCCCCSSSCCCBCEECSSSSCEEEECCC-CT
T ss_pred ccceeECCCCCeeEEEcC--------CCEEEEEECC-CCccc-eEEecccccccccceeEEEEEcCCCCEEEEEEcC-CC
Confidence 667899999999986662 2348899988 56532 12211111 00002234567999988 5444322 22
Q ss_pred ---------ceEEEEEEcCCCeEEEe
Q 004816 321 ---------FWNLHKWIESNNEVLAI 337 (729)
Q Consensus 321 ---------~~~l~~~d~~~g~~~~l 337 (729)
...|.++|..+|+....
T Consensus 368 ~~~~~~~~~~~~i~iwd~~~g~~~~~ 393 (435)
T 4e54_B 368 NFKSCTPYELRTIDVFDGNSGKMMCQ 393 (435)
T ss_dssp TSCCSSTTCCCCEEEECSSSCCEEEE
T ss_pred CeEEEEecCCCEEEEEECCCCcEEEE
Confidence 13477888888875543
No 388
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.64 E-value=1.5e-05 Score=84.05 Aligned_cols=259 Identities=8% Similarity=0.002 Sum_probs=134.8
Q ss_pred CccCceEEcC-CCcEEEEeecC------CCCCceEEEEcCCCCCCCCcccCCCCCccccc-ccccCCceEEEECCEEEEE
Q 004816 89 KRLGGTAVDG-HGRLIWLESRP------TEAGRGVLVKEPAKAGDEPSDITPKEYAVRTT-AQEYGGGAFRIFGDTVIFS 160 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~------~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~ 160 (729)
..+ ++.+|| |+.+|...... ...+ .+..++..+ .+...-++-+...+.. ........++++++.+++.
T Consensus 67 ~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~--~v~viD~~t-~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~ 142 (373)
T 2mad_H 67 FLP-NPVAAHSGSEFALASTSFSRIAKGKRTD--YVEVFDPVT-FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFF 142 (373)
T ss_pred CCC-CeEECCCCCEEEEEeccccccccCCCCC--eEEEEECCC-CcEEEEEECCCccccccCCCccceEECCCCCEEEEE
Confidence 345 899999 88888876311 1122 233445441 1221111110000100 0112234566677788777
Q ss_pred ECC-CCcEEEEeCCCCCCCCeec-CCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE-Eee
Q 004816 161 NYK-DQRLYKHSIDSKDSSPLPI-TPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-VLV 237 (729)
Q Consensus 161 ~~~-~~~l~~~d~~~~~~~~~~l-t~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~-~lt 237 (729)
+.. .+.|+++| ++ ++.... ...+ ..+.+.|+|++.++..... ..+.+++. +++.. ...
T Consensus 143 n~~~~~~v~viD-~t--~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~d--------g~~~~vd~-~g~~~~~~~ 203 (373)
T 2mad_H 143 QFAAGPAVGLVV-QG--GSSDDQLLSSP-------TCYHIHPGAPSTFYLLCAQ--------GGLAKTDH-AGGAAGAGL 203 (373)
T ss_pred ecCCCCeEEEEE-CC--CCEEeEEcCCC-------ceEEEEeCCCceEEEEcCC--------CCEEEEEC-CCcEEEEEe
Confidence 654 56899999 87 654332 3321 1245678887655443322 34677788 66544 221
Q ss_pred -----eCC-CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEe---cCC--CCCcc-ccccCcee
Q 004816 238 -----SGS-DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV---AGF--DPTIV-ESPTEPKW 305 (729)
Q Consensus 238 -----~~~-~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~---~~~--~~~~~-~~~~~~~w 305 (729)
.+. .....+.+++|+..++|... ...++++|+. ++.......+ ... ...|. .....+.+
T Consensus 204 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~v~vid~~-~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~ 274 (373)
T 2mad_H 204 VGAMLTAAQNLLTQPAQANKSGRIVWPVY--------SGKILQADIS-AAGATNKAPIDALSGGRKADTWRPGGWQQVAY 274 (373)
T ss_pred ccccccCCcceeecceeEecCCEEEEEcC--------CceEEEEecc-CCcceEeeeeeecCCcccccceecCceEeEEE
Confidence 111 12245778999999888872 2359999987 4432111111 100 00110 11122568
Q ss_pred CCCCc-EEEEEecC------CCceEEEEEEcCCCeE-EEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCe
Q 004816 306 SSKGE-LFFVTDRK------NGFWNLHKWIESNNEV-LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR 377 (729)
Q Consensus 306 spDG~-l~~~~~~~------~g~~~l~~~d~~~g~~-~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~ 377 (729)
+|||+ +|...+.. .+...|+++|+++++. +.|. ...... .+.|.+ |++.+++..+. +.
T Consensus 275 s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~---------~i~~s~---Dg~~~l~v~~~-~~ 340 (373)
T 2mad_H 275 LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVD---------AISVAQ---DGGPDLYALSA-GT 340 (373)
T ss_pred CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcC---------eEEECC---CCCeEEEEEcC-CC
Confidence 89988 55544320 1235799999999876 3443 221111 233443 77745555442 33
Q ss_pred EEEEEEECCCCceEee
Q 004816 378 SYLGILDDFGHSLSLL 393 (729)
Q Consensus 378 ~~ly~~d~~~g~~~~l 393 (729)
..|+++|.+++++...
T Consensus 341 ~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 341 EVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEECCCCCEEee
Confidence 5789999998876533
No 389
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.63 E-value=1.1e-05 Score=85.22 Aligned_cols=286 Identities=9% Similarity=0.031 Sum_probs=153.0
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCC--ceEEEECCEEEEEECCCC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGG--GAFRIFGDTVIFSNYKDQ 165 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~ 165 (729)
..+..+.|+| ++.++ ... .++...+|....+ +....+.. +.... .+|++++. .+++...++
T Consensus 67 ~~V~~~~~sp~~~~l~-s~s---~D~~v~iWd~~~~---~~~~~~~~--------h~~~v~~~~~s~~g~-~las~~~d~ 130 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIV-SAS---QDGRLIVWNALTS---QKTHAIKL--------HCPWVMECAFAPNGQ-SVACGGLDS 130 (380)
T ss_dssp SCEEEEEECTTSSCEE-EEE---TTSEEEEEETTTT---EEEEEEEC--------CCTTCCCCEECTTSS-EEEECCSSS
T ss_pred cEEEEEEEcCCCCEEE-EEe---CCCeEEEEECCCC---ccceEEec--------CCCCEEEEEECCCCC-EEEEeeCCC
Confidence 4567889999 65544 332 4677778865433 21111111 11112 23333333 455556677
Q ss_pred cEEEEeCCCCCCC--------CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEee
Q 004816 166 RLYKHSIDSKDSS--------PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLV 237 (729)
Q Consensus 166 ~l~~~d~~~~~~~--------~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt 237 (729)
.+.+|++.+ .. .+.+... ...+....|+|++...+++...+ ..|.++|+.+++.....
T Consensus 131 ~v~iw~~~~--~~~~~~~~~~~~~~~gh----~~~v~~~~~~~~~~~~l~s~s~D--------~~i~~wd~~~~~~~~~~ 196 (380)
T 3iz6_a 131 ACSIFNLSS--QADRDGNMPVSRVLTGH----KGYASSCQYVPDQETRLITGSGD--------QTCVLWDVTTGQRISIF 196 (380)
T ss_dssp CCEEEECCC--CSSCCCSSTTCCBCCCC----SSCCCCCBCCSSSSSCEEEECTT--------SCEEEECTTTCCEEEEE
T ss_pred cEEEEECCC--CccccCCccceeeccCC----CcceEEEEEecCCCCEEEEECCC--------CcEEEEEcCCCcEEEEe
Confidence 888888864 21 1223322 23456778999765434444332 45888999988765443
Q ss_pred e------CCCeeeeeeeCC-CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc
Q 004816 238 S------GSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 310 (729)
Q Consensus 238 ~------~~~~~~~~~~SP-DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~ 310 (729)
. .........|+| |++.|+-.+. ...|.++|+...+.. ...+.+.. ..+..+.|+|||+
T Consensus 197 ~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~--------D~~v~~wd~~~~~~~--~~~~~~h~----~~v~~v~~~p~~~ 262 (380)
T 3iz6_a 197 GSEFPSGHTADVLSLSINSLNANMFISGSC--------DTTVRLWDLRITSRA--VRTYHGHE----GDINSVKFFPDGQ 262 (380)
T ss_dssp CCCSSSSCCSCEEEEEECSSSCCEEEEEET--------TSCEEEEETTTTCCC--CEEECCCS----SCCCEEEECTTSS
T ss_pred ecccCCCCccCeEEEEeecCCCCEEEEEEC--------CCeEEEEECCCCCcc--eEEECCcC----CCeEEEEEecCCC
Confidence 1 123345567866 8887765552 234888998622332 45566665 6678899999999
Q ss_pred EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce
Q 004816 311 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 390 (729)
Q Consensus 311 l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~ 390 (729)
+++.... .+ .|.++|+.+++........... ...-.+....+.|.+ +++ ++++...+|...| +|...++.
T Consensus 263 ~l~s~s~-D~--~i~lwd~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~---~g~-~l~~g~~dg~i~v--wd~~~~~~ 332 (380)
T 3iz6_a 263 RFGTGSD-DG--TCRLFDMRTGHQLQVYNREPDR-NDNELPIVTSVAFSI---SGR-LLFAGYSNGDCYV--WDTLLAEM 332 (380)
T ss_dssp EEEEECS-SS--CEEEEETTTTEEEEEECCCCSS-SCCSSCSCSEEEECS---SSS-EEEEECTTSCEEE--EETTTCCE
T ss_pred eEEEEcC-CC--eEEEEECCCCcEEEEecccccc-cccccCceEEEEECC---CCC-EEEEEECCCCEEE--EECCCCce
Confidence 5555443 34 4666788888765544221110 000111123455653 554 4555555665555 47666554
Q ss_pred E-ee----ccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCC
Q 004816 391 S-LL----DIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDH 431 (729)
Q Consensus 391 ~-~l----t~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~ 431 (729)
. .+ ......|..+ ..+++.+++.++. + ..+.++++.+.
T Consensus 333 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~-D--~~i~iW~~~~~ 376 (380)
T 3iz6_a 333 VLNLGTLQNSHEGRISCLGLSSDGSALCTGSW-D--KNLKIWAFSGH 376 (380)
T ss_dssp EEEECCSCSSCCCCCCEEEECSSSSEEEEECT-T--SCEEEEECCSS
T ss_pred EEEEecccCCCCCceEEEEECCCCCEEEEeeC-C--CCEEEEecCCC
Confidence 3 33 1233456666 4445555555543 3 24555555554
No 390
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.63 E-value=2.3e-05 Score=81.09 Aligned_cols=152 Identities=9% Similarity=-0.016 Sum_probs=90.7
Q ss_pred ceEEEECC-EEEEEECCCCcEEEEeCCCCCCC--------CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCC
Q 004816 148 GAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSS--------PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALN 218 (729)
Q Consensus 148 ~~~~~~~~-~i~~~~~~~~~l~~~d~~~~~~~--------~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~ 218 (729)
.+..++++ .++++...++.|.+|++.. .. ...+... ...+...+|||||++|+....+
T Consensus 62 ~~v~~sp~~~~las~s~D~~v~iw~~~~--~~~~~~~~~~~~~~~~h----~~~V~~v~~sp~g~~las~s~D------- 128 (330)
T 2hes_X 62 RSVAWRPHTSLLAAGSFDSTVSIWAKEE--SADRTFEMDLLAIIEGH----ENEVKGVAWSNDGYYLATCSRD------- 128 (330)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEC---------CCCEEEEEEC--------CEEEEEECTTSCEEEEEETT-------
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEccc--CcCccccceeEEEEcCC----CCcEEEEEECCCCCEEEEEeCC-------
Confidence 34444433 4555666788899998853 21 1122222 3456788999999987766554
Q ss_pred cceEEEEEEcC-CCc---e-EEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCC
Q 004816 219 STTEIVAIALN-GQN---I-QVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD 293 (729)
Q Consensus 219 ~~~~l~~~dl~-~g~---~-~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~ 293 (729)
..|.++|+. +++ . ..+...........|+|||+.|+-.+.+ ..|.++|+. ++.......+.+..
T Consensus 129 --~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D--------~~i~iW~~~-~~~~~~~~~~~~h~ 197 (330)
T 2hes_X 129 --KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD--------DTVRIWKDY-DDDWECVAVLNGHE 197 (330)
T ss_dssp --SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT--------SCEEEEEEE-TTEEEEEEEECCCS
T ss_pred --CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC--------CeEEEEECC-CCCeeEEEEccCCC
Confidence 358888884 322 1 2233344567788999999988766632 337777876 45333345566665
Q ss_pred CCccccccCceeCCC--CcEEEEEecCCCceEEEEEE
Q 004816 294 PTIVESPTEPKWSSK--GELFFVTDRKNGFWNLHKWI 328 (729)
Q Consensus 294 ~~~~~~~~~~~wspD--G~l~~~~~~~~g~~~l~~~d 328 (729)
..+..+.|+|+ +.+++.... .+.-+||.+.
T Consensus 198 ----~~v~~~~~~~~~~~~~l~s~s~-D~~v~iw~~~ 229 (330)
T 2hes_X 198 ----GTVWSSDFDKTEGVFRLCSGSD-DSTVRVWKYM 229 (330)
T ss_dssp ----SCEEEEEECCSSSSCEEEEEET-TSCEEEEEEE
T ss_pred ----CcEEEEEecCCCCeeEEEEEeC-CCeEEEEEec
Confidence 55677889999 444444444 4666666543
No 391
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.62 E-value=7.5e-06 Score=87.18 Aligned_cols=229 Identities=10% Similarity=0.044 Sum_probs=140.5
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCC----C
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG----Q 231 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~----g 231 (729)
.++|.. ...|.++++++ .....+... ......+.|+++++.|+++.... ..|+++++++ +
T Consensus 85 ~ll~~~--~~~I~~i~l~~--~~~~~~~~~----~~~~~~l~~d~~~~~lywsD~~~--------~~I~~~~~~g~~~~~ 148 (400)
T 3p5b_L 85 YLFFTN--RHEVRKMTLDR--SEYTSLIPN----LRNVVALDTEVASNRIYWSDLSQ--------RMICSTQLDRAHGVS 148 (400)
T ss_dssp EEEEEE--TTEEEEECTTS--CSCEEEECS----CSCEEEEEEETTTTEEEEEETTT--------TEEEEEEC------C
T ss_pred eeEEec--cceeEEEccCC--cceeEeccc----cCcceEEeeeeccCceEEEecCC--------CeEEEEEcccCCCCC
Confidence 456664 45799999987 655555443 23446778999888877764332 5799999986 2
Q ss_pred ceEEeee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc
Q 004816 232 NIQVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 310 (729)
Q Consensus 232 ~~~~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~ 310 (729)
....+.. +.....+.++.+.++.|+|+... ...|.+++++ +... ..+....- .....++..|.+.
T Consensus 149 ~~~~~~~~~~~~p~glavD~~~~~lY~~d~~-------~~~I~~~~~~-g~~~--~~l~~~~~----~~P~~iavdp~~g 214 (400)
T 3p5b_L 149 SYDTVISRDIQAPDGLAVDWIHSNIYWTDSV-------LGTVSVADTK-GVKR--KTLFRENG----SKPRAIVVDPVHG 214 (400)
T ss_dssp CCEEEECSSCSCEEEEEEETTTTEEEEEETT-------TTEEEEECTT-TCSE--EEEEECSS----CCEEEEEEETTTT
T ss_pred cceEEEeCCCCCcccEEEEecCCceEEEECC-------CCeEEEEeCC-CCce--EEEEeCCC----CCcceEEEecccC
Confidence 3444433 44555677888888889988732 3469999887 3332 23333221 3345677888666
Q ss_pred -EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCc
Q 004816 311 -LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 389 (729)
Q Consensus 311 -l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~ 389 (729)
|||+ +. .....|+++++++...+.+.... ..| .+.+.+.+ +++.|||+- .+...|++++++++.
T Consensus 215 ~ly~t-d~-~~~~~I~~~~~dG~~~~~~~~~~-----l~~---P~glavd~---~~~~lY~aD--~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 215 FMYWT-DW-GTPAKIKKGGLNGVDIYSLVTEN-----IQW---PNGITLDL---LSGRLYWVD--SKLHSISSIDVNGGN 279 (400)
T ss_dssp EEEEE-EC-SSSCCEEEEETTSCSCEEEECSS-----CSC---EEEEEEET---TTTEEEEEE--TTTTEEEEEETTSCC
T ss_pred eEEEE-eC-CCCCEEEEEeCCCCccEEEEECC-----CCc---eEEEEEEe---CCCEEEEEE--CCCCEEEEEeCCCCc
Confidence 6554 43 22357999999887666665321 111 12344432 577888874 345579999999887
Q ss_pred eEeeccC---CcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 390 LSLLDIP---FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 390 ~~~lt~~---~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
.+.+... ...-..+..+++.+++.... ...|++++..+|+
T Consensus 280 ~~~~~~~~~~l~~P~gl~v~~~~lywtd~~---~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 280 RKTILEDEKRLAHPFSLAVFEDKVFWTDII---NEAIFSANRLTGS 322 (400)
T ss_dssp CEEEEECSSTTSSEEEEEEETTEEEEEESS---SCSEEEEESSSCC
T ss_pred cEEEEeCCCCCCCCEEEEEeCCEEEEecCC---CCeEEEEEcCCCC
Confidence 7666432 22334555567766665532 2458888865554
No 392
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.61 E-value=9e-06 Score=83.07 Aligned_cols=239 Identities=11% Similarity=0.016 Sum_probs=131.4
Q ss_pred ceEEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEE
Q 004816 148 GAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (729)
Q Consensus 148 ~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~d 227 (729)
...+|+.+.++.+. .++.|++||+.+ ++..++....+ ....+...+|+|||++|+....+ ..|.+++
T Consensus 29 ~~l~WS~~~~lAvg-~D~tV~iWd~~t--g~~~~~~~~~~-~~~~V~~v~~~~~~~~l~sgs~D---------g~v~iw~ 95 (318)
T 4ggc_A 29 NLVDWSSGNVLAVA-LDNSVYLWSASS--GDILQLLQMEQ-PGEYISSVAWIKEGNYLAVGTSS---------AEVQLWD 95 (318)
T ss_dssp BCEEECTTSEEEEE-ETTEEEEEETTT--CCEEEEEECCS-TTCCEEEEEECTTSSEEEEEETT---------SEEEEEE
T ss_pred eEEEECCCCEEEEE-eCCEEEEEECCC--CCEEEEEEecC-CCCeEEEEEECCCCCEEEEEECC---------CcEEEee
Confidence 34566655444443 477899999998 66544322110 13456788999999987765543 3566677
Q ss_pred cCCCceEEeeeC------------------------------------------CCeeeeeeeCCCCCeEEEEEecCCCC
Q 004816 228 LNGQNIQVLVSG------------------------------------------SDFYAFPRMDPRGERMAWIEWHHPNM 265 (729)
Q Consensus 228 l~~g~~~~lt~~------------------------------------------~~~~~~~~~SPDG~~la~~~~~~~~~ 265 (729)
+.+++......+ ........|+++|+.|+....
T Consensus 96 ~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~----- 170 (318)
T 4ggc_A 96 VQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN----- 170 (318)
T ss_dssp TTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET-----
T ss_pred cCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEec-----
Confidence 766654322111 112234467777776665442
Q ss_pred CCCCcEEEEEEecCCCCee--eeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEEeeccCc
Q 004816 266 PWDKAELWVGYISENGDVY--KRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDA 342 (729)
Q Consensus 266 ~~~~~~l~~~d~~~~g~~~--~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~ 342 (729)
...|.++|+. +++.. ......... ..+....|+|++. +++.... .....|.++|...+..........
T Consensus 171 ---d~~i~iwd~~-~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~-~~~~~i~lwd~~~~~~~~~~~~~~ 241 (318)
T 4ggc_A 171 ---DNLVNVWPSA-PGEGGWVPLQTFTQHQ----GAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGACLSAVDAHS 241 (318)
T ss_dssp ---TSCEEEEESS-CBTTBSCCSEEECCCC----SCEEEEEECTTSTTEEEEEEC-TTTCEEEEEETTTCCEEEEEECSS
T ss_pred ---CcceeEEECC-CCcccccceeeecccC----CceEEEEecCCCCcEEEEEec-CCCCEEEEEeccccccccccccee
Confidence 2337777876 44321 122222332 4456678999887 6655443 334556667877766554443332
Q ss_pred cccCCcccccCcceeeeeecCCCCEEEEEEE-ECCeEEEEEEECCCCce-EeeccCCcceEEe-eeeCCEEEEEEeCCCC
Q 004816 343 EFSRPLWVFGINSYEIIQSHGEKNLIACSYR-QNGRSYLGILDDFGHSL-SLLDIPFTDIDNI-TLGNDCLFVEGASGVE 419 (729)
Q Consensus 343 ~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~-~~g~~~ly~~d~~~g~~-~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~ 419 (729)
......|.+ +++.++..+. .++. |+++|+.+++. ..+......|..+ ..+++.+++.++.+
T Consensus 242 ~v~~~~~~~------------~~~~~~~~sg~~d~~--i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D-- 305 (318)
T 4ggc_A 242 QVCSILWSP------------HYKELISGHGFAQNQ--LVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD-- 305 (318)
T ss_dssp CEEEEEEET------------TTTEEEEEECTTTCC--EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT--
T ss_pred eeeeeeecc------------cccceEEEEEcCCCE--EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC--
Confidence 222223332 5566655442 3454 55557776654 4555556678877 44555566665543
Q ss_pred CceEEEEEcCC
Q 004816 420 PSSVAKVTLDD 430 (729)
Q Consensus 420 ~~~ly~~d~~~ 430 (729)
..+.+.++..
T Consensus 306 -~~v~iWd~~~ 315 (318)
T 4ggc_A 306 -ETLRLWRCFE 315 (318)
T ss_dssp -TEEEEECCSC
T ss_pred -CeEEEEECCC
Confidence 2455555443
No 393
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.61 E-value=7e-08 Score=99.66 Aligned_cols=108 Identities=14% Similarity=0.087 Sum_probs=76.8
Q ss_pred CEEEEEcCCCCCC--------ccccc----hhhhHHHhhCCcE---EEEecCCCCCCCchhHHHhhccCCCcccHHHHHH
Q 004816 493 PLLVKSHGGPTSE--------ARGIL----NLSIQYWTSRGWA---FVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCS 557 (729)
Q Consensus 493 P~vv~~hGg~~~~--------~~~~~----~~~~~~la~~G~~---v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~ 557 (729)
+.||++||..... ....| ..+++.|.++||. |+.+|++|.+ .+...... .......+++.+
T Consensus 41 ~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G---~S~~~~~~-~~~~~~~~~l~~ 116 (342)
T 2x5x_A 41 TPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSS---EQGSAQYN-YHSSTKYAIIKT 116 (342)
T ss_dssp CCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHH---HHTCGGGC-CBCHHHHHHHHH
T ss_pred CeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCC---ccCCcccc-CCHHHHHHHHHH
Confidence 3488899975532 23455 6788899999998 9999998643 21100000 011123677888
Q ss_pred HHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-C--CCcceEEEEeccccC
Q 004816 558 CATFLVGSGKADEKRLCITGGSAGGYTTLAALA-F--RDTFKAGASLYGVAD 606 (729)
Q Consensus 558 ~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~--~~~~~a~v~~~~~~d 606 (729)
.++.++++. ..+++.|+||||||.+++.++. + |++++++|++++...
T Consensus 117 ~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 117 FIDKVKAYT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 888877653 2468999999999999999987 6 899999999987643
No 394
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.60 E-value=7.1e-06 Score=84.35 Aligned_cols=229 Identities=13% Similarity=0.087 Sum_probs=139.8
Q ss_pred EEEEECCCCcEEEEeCCCCCCC--CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce-
Q 004816 157 VIFSNYKDQRLYKHSIDSKDSS--PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI- 233 (729)
Q Consensus 157 i~~~~~~~~~l~~~d~~~~~~~--~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~- 233 (729)
|+|.. ...|.++++++ .. ...+... ........|+++++.|+++... ...|++++++++..
T Consensus 7 ll~~~--~~~I~~i~l~~--~~~~~~~~~~~----~~~~~~ld~d~~~~~lyw~D~~--------~~~I~r~~~~g~~~~ 70 (318)
T 3sov_A 7 LLYAN--RRDLRLVDATN--GKENATIVVGG----LEDAAAVDFVFSHGLIYWSDVS--------EEAIKRTEFNKTESV 70 (318)
T ss_dssp EEEEC--EEEEEEEETTC--TTSCCEEEEEE----EEEEEEEEEEGGGTEEEEEETT--------TTEEEEEETTSSSCC
T ss_pred EEEEc--cCeEEEEECCC--CceEEEEEecC----CCccEEEEEEeCCCEEEEEECC--------CCcEEEEEccCCCce
Confidence 56663 45799999986 42 2222222 1234567799988887766432 25799999988742
Q ss_pred -EEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-E
Q 004816 234 -QVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-L 311 (729)
Q Consensus 234 -~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l 311 (729)
..+..+.....+.++.+.++.|+|+... ...|.+++++ |... ..+....- .....++..|++. |
T Consensus 71 ~~~~~~~l~~p~glavd~~~g~ly~~d~~-------~~~I~~~~~d--G~~~-~~l~~~~~----~~P~giavdp~~g~l 136 (318)
T 3sov_A 71 QNVVVSGLLSPDGLACDWLGEKLYWTDSE-------TNRIEVSNLD--GSLR-KVLFWQEL----DQPRAIALDPSSGFM 136 (318)
T ss_dssp CEEEEECCSCCCEEEEETTTTEEEEEETT-------TTEEEEEETT--SCSC-EEEECSSC----SSEEEEEEEGGGTEE
T ss_pred EEEEcCCCCCccEEEEEcCCCeEEEEECC-------CCEEEEEECC--CCcE-EEEEeCCC----CCccEEEEeCCCCEE
Confidence 3444454555678898888889888732 3469999987 3321 22332222 3445677887655 5
Q ss_pred EEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceE
Q 004816 312 FFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 391 (729)
Q Consensus 312 ~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~ 391 (729)
||+ +. .....|+++++++...+.+.... + .| .+.+.+.+ +++.|||+- .+...|++++++++..+
T Consensus 137 y~t-d~-~~~~~I~r~~~dG~~~~~~~~~~--l---~~---Pnglavd~---~~~~lY~aD--~~~~~I~~~d~dG~~~~ 201 (318)
T 3sov_A 137 YWT-DW-GEVPKIERAGMDGSSRFIIINSE--I---YW---PNGLTLDY---EEQKLYWAD--AKLNFIHKSNLDGTNRQ 201 (318)
T ss_dssp EEE-EC-SSSCEEEEEETTSCSCEEEECSS--C---SC---EEEEEEET---TTTEEEEEE--TTTTEEEEEETTSCSCE
T ss_pred EEE-ec-CCCCEEEEEEcCCCCeEEEEECC--C---CC---ccEEEEec---cCCEEEEEE--CCCCEEEEEcCCCCceE
Confidence 554 43 23568999999876655554321 1 11 12344443 578898875 34557999999887766
Q ss_pred eecc-CCcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 392 LLDI-PFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 392 ~lt~-~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
.+.. ....-..+..+++.+++... ....|++++..+|+.
T Consensus 202 ~~~~~~~~~P~glav~~~~lywtd~---~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 202 AVVKGSLPHPFALTLFEDILYWTDW---STHSILACNKYTGEG 241 (318)
T ss_dssp EEECSCCSCEEEEEEETTEEEEEET---TTTEEEEEETTTCCS
T ss_pred EEecCCCCCceEEEEeCCEEEEEec---CCCeEEEEECCCCCc
Confidence 6544 23334455556666666532 335788888866653
No 395
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.59 E-value=1.5e-06 Score=100.04 Aligned_cols=231 Identities=10% Similarity=-0.001 Sum_probs=138.0
Q ss_pred CEEEEEECCCCcEEEEeCCCCCCC-----CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcC
Q 004816 155 DTVIFSNYKDQRLYKHSIDSKDSS-----PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (729)
Q Consensus 155 ~~i~~~~~~~~~l~~~d~~~~~~~-----~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~ 229 (729)
..++++...++.|.+|++... .. .+.+..+ ...+...+|||||+.|+....+ ..|.++|+.
T Consensus 395 ~~~l~s~s~D~~i~~W~~~~~-~~~~~~~~~~~~~h----~~~v~~v~~s~~g~~l~sgs~D---------g~v~vwd~~ 460 (694)
T 3dm0_A 395 ADIIVSASRDKSIILWKLTKD-DKAYGVAQRRLTGH----SHFVEDVVLSSDGQFALSGSWD---------GELRLWDLA 460 (694)
T ss_dssp CSEEEEEETTSEEEEEECCCS-TTCSCEEEEEEECC----SSCEEEEEECTTSSEEEEEETT---------SEEEEEETT
T ss_pred CCEEEEEeCCCcEEEEEccCC-CcccccccceecCC----CCcEEEEEECCCCCEEEEEeCC---------CcEEEEECC
Confidence 357777778889999998751 11 1234443 3456788999999987766543 468999999
Q ss_pred CCceE-EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCC
Q 004816 230 GQNIQ-VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK 308 (729)
Q Consensus 230 ~g~~~-~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspD 308 (729)
+++.. .+..........+|||||++|+-.+.+ ..|.++|+. +... ..+..... .....+..+.|+|+
T Consensus 461 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D--------~~i~iwd~~-~~~~--~~~~~~~~-~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 461 AGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD--------RTIKLWNTL-GECK--YTISEGGE-GHRDWVSCVRFSPN 528 (694)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSSCEEEEETT--------SCEEEECTT-SCEE--EEECSSTT-SCSSCEEEEEECSC
T ss_pred CCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC--------CEEEEEECC-CCcc--eeeccCCC-CCCCcEEEEEEeCC
Confidence 88654 344445567788999999999866632 337788865 3321 22222111 00034567889999
Q ss_pred Cc--EEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEEC
Q 004816 309 GE--LFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 385 (729)
Q Consensus 309 G~--l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~ 385 (729)
+. +++.... .+ .|.++|+.+++..... .....+.. +.|.+ ++ .++++...+|...|| |+
T Consensus 529 ~~~~~l~s~s~-d~--~v~vwd~~~~~~~~~~~~h~~~v~~---------v~~sp---dg-~~l~sg~~Dg~i~iw--d~ 590 (694)
T 3dm0_A 529 TLQPTIVSASW-DK--TVKVWNLSNCKLRSTLAGHTGYVST---------VAVSP---DG-SLCASGGKDGVVLLW--DL 590 (694)
T ss_dssp SSSCEEEEEET-TS--CEEEEETTTCCEEEEECCCSSCEEE---------EEECT---TS-SEEEEEETTSBCEEE--ET
T ss_pred CCcceEEEEeC-CC--eEEEEECCCCcEEEEEcCCCCCEEE---------EEEeC---CC-CEEEEEeCCCeEEEE--EC
Confidence 74 4555444 34 4566688777655433 22222222 33432 44 455666677876666 66
Q ss_pred CCCceEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 386 FGHSLSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 386 ~~g~~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
.+++..........+..+ ..+++.+++.+.. ..+.++|+.+++.
T Consensus 591 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 591 AEGKKLYSLEANSVIHALCFSPNRYWLCAATE----HGIKIWDLESKSI 635 (694)
T ss_dssp TTTEEEECCBCSSCEEEEEECSSSSEEEEEET----TEEEEEETTTTEE
T ss_pred CCCceEEEecCCCcEEEEEEcCCCcEEEEEcC----CCEEEEECCCCCC
Confidence 666543222334456666 4445555554432 2488888887754
No 396
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.59 E-value=5.5e-06 Score=102.15 Aligned_cols=243 Identities=13% Similarity=0.037 Sum_probs=139.4
Q ss_pred eEEEECC-EEEEEECCCCcEEEEeCCCCCCC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEE
Q 004816 149 AFRIFGD-TVIFSNYKDQRLYKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (729)
Q Consensus 149 ~~~~~~~-~i~~~~~~~~~l~~~d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~ 226 (729)
+..++.+ ..+++...++.|.+|++.+ ++ ...+... ...+...+|||||++|+....+ ..|.++
T Consensus 620 ~~~~s~~~~~l~s~~~d~~i~vw~~~~--~~~~~~~~~h----~~~v~~~~~s~~~~~l~s~~~d---------~~v~vw 684 (1249)
T 3sfz_A 620 HACFSQDGQRIASCGADKTLQVFKAET--GEKLLDIKAH----EDEVLCCAFSSDDSYIATCSAD---------KKVKIW 684 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTT--CCEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCC--CCEEEEeccC----CCCEEEEEEecCCCEEEEEeCC---------CeEEEE
Confidence 3444433 3455556778999999987 44 3444433 3557888999999988766543 469999
Q ss_pred EcCCCceEE-eeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCcee
Q 004816 227 ALNGQNIQV-LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 305 (729)
Q Consensus 227 dl~~g~~~~-lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~w 305 (729)
|+.+++... +...........|+|+++..+++.... ...|.++|+. +++. ...+.+.. ..+..+.|
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~------d~~v~vwd~~-~~~~--~~~~~~h~----~~v~~~~~ 751 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSN------DFFLKLWDLN-QKEC--RNTMFGHT----NSVNHCRF 751 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEET------TSCEEEEETT-SSSE--EEEECCCS----SCEEEEEE
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeC------CCeEEEEECC-Ccch--hheecCCC----CCEEEEEE
Confidence 999887654 344455667789999765433333222 2348999998 6764 44455554 56678899
Q ss_pred CCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCcccc---C--CcccccCcceeeeeecCCCCEEEEEEEECCeEEE
Q 004816 306 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFS---R--PLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 380 (729)
Q Consensus 306 spDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~---~--~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~l 380 (729)
+|||+++++... .+ .|.++|+.+++............ . .........+.|.+ +++.++..+ ++ .+
T Consensus 752 sp~~~~l~s~s~-dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---dg~~l~~~~--~~--~v 821 (1249)
T 3sfz_A 752 SPDDELLASCSA-DG--TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA---DGDKIIVAA--KN--KV 821 (1249)
T ss_dssp CSSTTEEEEEES-SS--EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT---TSSEEEEEE--TT--EE
T ss_pred ecCCCEEEEEEC-CC--eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECC---CCCEEEEEc--CC--cE
Confidence 999994444443 34 46666777765443221110000 0 00000112334443 666666554 44 45
Q ss_pred EEEECCCCceE-eec-cCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 381 GILDDFGHSLS-LLD-IPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 381 y~~d~~~g~~~-~lt-~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
++++..++... .+. .....+..+ ..+++.+++.++.. ..+..+++.++.
T Consensus 822 ~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d---g~v~vwd~~~~~ 873 (1249)
T 3sfz_A 822 LLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ---YCVELWNIDSRL 873 (1249)
T ss_dssp EEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS---SCEEEEETTTTE
T ss_pred EEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCc
Confidence 66677776643 232 234445555 34444455554433 346666766654
No 397
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.57 E-value=1.9e-05 Score=87.76 Aligned_cols=244 Identities=10% Similarity=0.007 Sum_probs=131.8
Q ss_pred ECCEEEEEECCCCcEEEEeCCCCCCCCee-cCCCC---CC----CceeeecceecCCCCEEEEEEeccCCCCCCcceEEE
Q 004816 153 FGDTVIFSNYKDQRLYKHSIDSKDSSPLP-ITPDY---GE----PLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (729)
Q Consensus 153 ~~~~i~~~~~~~~~l~~~d~~~~~~~~~~-lt~~~---~~----~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~ 224 (729)
++..++..+...+++.++|..+ .+..+ +.... +. +..++.....|+++..+++.... ...|+
T Consensus 254 DGk~l~v~n~~~~~v~ViD~~t--~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~--------~g~v~ 323 (567)
T 1qks_A 254 EDKYAIAGAYWPPQYVIMDGET--LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE--------TGKIL 323 (567)
T ss_dssp TTTEEEEEEEETTEEEEEETTT--CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT--------TTEEE
T ss_pred CCCEEEEEEccCCeEEEEECCC--CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC--------CCeEE
Confidence 4556777777778999999877 54433 22110 00 01245667789988865554432 25799
Q ss_pred EEEcCCCceEEeee--CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccc-c
Q 004816 225 AIALNGQNIQVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP-T 301 (729)
Q Consensus 225 ~~dl~~g~~~~lt~--~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~-~ 301 (729)
++|....+...++. ...+..+..|+|||++++..... ...|.++|++ ++++.......+.. ... .
T Consensus 324 ~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~-------sn~V~ViD~~-t~kl~~~i~vgg~~----Phpg~ 391 (567)
T 1qks_A 324 LVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA-------RNKLVVIDTK-EGKLVAIEDTGGQT----PHPGR 391 (567)
T ss_dssp EEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG-------GTEEEEEETT-TTEEEEEEECSSSS----BCCTT
T ss_pred EEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC-------CCeEEEEECC-CCcEEEEEeccCcC----CCCcc
Confidence 99987654322221 22344456899999988766532 3459999998 77753322220221 111 2
Q ss_pred Ccee-CCCCc-EEEEEecCCCceEEEEEEcCCCe-------E-EEeeccCccccCCcccccCcceeeeeecCCCCEEEEE
Q 004816 302 EPKW-SSKGE-LFFVTDRKNGFWNLHKWIESNNE-------V-LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACS 371 (729)
Q Consensus 302 ~~~w-spDG~-l~~~~~~~~g~~~l~~~d~~~g~-------~-~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~ 371 (729)
.+.| .||+. ++++.+. +...|.++|.++++ . +.+. ... ..+.+ +...| +++.+|+.
T Consensus 392 g~~~~~p~~g~v~~t~~~--g~~~Vsvid~~~~~~~~~~~kvv~~i~-~~g--~g~~~------i~~~p---~~~~l~v~ 457 (567)
T 1qks_A 392 GANFVHPTFGPVWATSHM--GDDSVALIGTDPEGHPDNAWKILDSFP-ALG--GGSLF------IKTHP---NSQYLYVD 457 (567)
T ss_dssp CEEEEETTTEEEEEEEBS--SSSEEEEEECCTTTCTTTBTSEEEEEE-CSC--SCCCC------EECCT---TCSEEEEE
T ss_pred ceeeECCCCCcEEEeCCC--CCCeEEEecCCCCCCccccCEEEEEEe-cCC--CCCEE------EEeCC---CCCeEEEe
Confidence 3344 78866 6555544 44568888877622 2 2222 111 11111 11121 66666654
Q ss_pred EEECC-----eEEEEEEECCCC-----c--eEeecc--------CCcceEEe--eeeCCEEEEEEe-CCCCCceEEEEEc
Q 004816 372 YRQNG-----RSYLGILDDFGH-----S--LSLLDI--------PFTDIDNI--TLGNDCLFVEGA-SGVEPSSVAKVTL 428 (729)
Q Consensus 372 s~~~g-----~~~ly~~d~~~g-----~--~~~lt~--------~~~~v~~~--~~~~~~~~~~~~-~~~~~~~ly~~d~ 428 (729)
. +.+ ...|.++|.++. . .+.|.. +...+..+ ..+++.+++..- ..+....|.++|.
T Consensus 458 ~-~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 458 A-TLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp C-TTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred c-CCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEEC
Confidence 3 222 347888887655 1 133321 11223333 455666665543 3345677999998
Q ss_pred CCCcc
Q 004816 429 DDHKL 433 (729)
Q Consensus 429 ~~~~~ 433 (729)
+++++
T Consensus 537 ~t~~~ 541 (567)
T 1qks_A 537 KTLEL 541 (567)
T ss_dssp TTTEE
T ss_pred CCceE
Confidence 88765
No 398
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.57 E-value=3.4e-05 Score=78.44 Aligned_cols=230 Identities=7% Similarity=-0.039 Sum_probs=128.5
Q ss_pred EEEEEECCCCcEEEEeCCCCCC-CCeecCCCCCCCceeeecceecCC--CCEEEEEEeccCCCCCCcceEEEEEEcCCCc
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDS-SPLPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~-~~~~lt~~~~~~~~~~~~~~~SPd--G~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~ 232 (729)
..+++...++.|.+|++.++.. ....+... ...+...+|+|+ |+.|+....+ ..|.++|+.+++
T Consensus 22 ~~las~s~D~~v~iw~~~~~~~~~~~~l~gH----~~~V~~v~~s~~~~g~~l~s~s~D---------~~v~iWd~~~~~ 88 (297)
T 2pm7_B 22 KRMATCSSDKTIKIFEVEGETHKLIDTLTGH----EGPVWRVDWAHPKFGTILASCSYD---------GKVMIWKEENGR 88 (297)
T ss_dssp SEEEEEETTSCEEEEEBCSSCBCCCEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------TEEEEEEBSSSC
T ss_pred CEEEEEeCCCEEEEEecCCCCcEEEEEEccc----cCCeEEEEecCCCcCCEEEEEcCC---------CEEEEEEcCCCc
Confidence 3455666788899999874101 22344443 345678889874 8876655543 468888998774
Q ss_pred e---EEeeeCCCeeeeeeeCCC--CCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCC
Q 004816 233 I---QVLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS 307 (729)
Q Consensus 233 ~---~~lt~~~~~~~~~~~SPD--G~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wsp 307 (729)
. ..+..........+|+|| |+.|+..+. ...|.++|+. ++.......+.+.. ..+..+.|+|
T Consensus 89 ~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~--------d~~v~~wd~~-~~~~~~~~~~~~h~----~~v~~~~~~p 155 (297)
T 2pm7_B 89 WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASS--------DGKVSVVEFK-ENGTTSPIIIDAHA----IGVNSASWAP 155 (297)
T ss_dssp BCCCEEECCCSSCEEEEEECCGGGCSEEEEEET--------TSEEEEEEBC-SSSCBCCEEEECCS----SCEEEEEECC
T ss_pred eEEEEEeecCCCceeEEEeCcCCCCcEEEEEEC--------CCcEEEEEec-CCCceeeeeeeccc----CccceEeecC
Confidence 3 233333455678899998 888876652 3458888987 44322233444544 5566788999
Q ss_pred C-------------CcEEEEEecCCCceEEEEEEcCCCe--E---EEeeccCccccCCcccccCcceeeeeecCCC--CE
Q 004816 308 K-------------GELFFVTDRKNGFWNLHKWIESNNE--V---LAIYSLDAEFSRPLWVFGINSYEIIQSHGEK--NL 367 (729)
Q Consensus 308 D-------------G~l~~~~~~~~g~~~l~~~d~~~g~--~---~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~--~~ 367 (729)
+ +++++.... .+.-.|| |..+++ . ..+......+.. +.|.| ++ +.
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs~-D~~v~lw--d~~~~~~~~~~~~~l~~H~~~V~~---------v~~sp---~~~~~~ 220 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGGA-DNLVKIW--KYNSDAQTYVLESTLEGHSDWVRD---------VAWSP---TVLLRS 220 (297)
T ss_dssp CC------------CCEEEEEET-TSCEEEE--EEETTTTEEEEEEEECCCSSCEEE---------EEECC---CCSSSE
T ss_pred CcccccccCCCCCCcceEEEEcC-CCcEEEE--EEcCCCceEEEEEEecCCCCceEE---------EEECC---CCCCce
Confidence 7 354555544 4555555 444433 1 122222222222 33432 43 46
Q ss_pred EEEEEEECCeEEEEEEECCCCce--Eeec--cCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEE
Q 004816 368 IACSYRQNGRSYLGILDDFGHSL--SLLD--IPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVT 427 (729)
Q Consensus 368 l~~~s~~~g~~~ly~~d~~~g~~--~~lt--~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d 427 (729)
++.+...++...||-++...+.. +.+. .....+..+ ..+++.+++.++. +..-.+|..+
T Consensus 221 ~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~-D~~v~lw~~~ 284 (297)
T 2pm7_B 221 YMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-DNKVTLWKEN 284 (297)
T ss_dssp EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET-TSCEEEEEEC
T ss_pred EEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC-CCcEEEEEEC
Confidence 77777888988888765432222 2231 223345555 4445555555543 3333455544
No 399
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.56 E-value=6.9e-06 Score=84.75 Aligned_cols=196 Identities=9% Similarity=-0.017 Sum_probs=111.8
Q ss_pred eEEEECC-EEEEEECCCCcEEEEeCCCCCCCCee---cCCCCCCCceeeecceecC--CCCEEEEEEeccCCCCCCcceE
Q 004816 149 AFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLP---ITPDYGEPLVSYADGIFDP--RFNRYVTVREDRRQDALNSTTE 222 (729)
Q Consensus 149 ~~~~~~~-~i~~~~~~~~~l~~~d~~~~~~~~~~---lt~~~~~~~~~~~~~~~SP--dG~~l~~~~~~~~~~~~~~~~~ 222 (729)
+..++.+ .++++...++.|.+|++.++....+. +... ...+...+|+| ||+.|+....+ ..
T Consensus 16 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~d~~~l~s~~~d---------g~ 82 (351)
T 3f3f_A 16 DVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH----DSSIVAIDWASPEYGRIIASASYD---------KT 82 (351)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC----SSCEEEEEECCGGGCSEEEEEETT---------SC
T ss_pred EEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccC----CCcEEEEEEcCCCCCCEEEEEcCC---------Ce
Confidence 3444322 34556667888999998862011122 2222 34567889999 69987766553 35
Q ss_pred EEEEEcCCCc----------eEEeeeCCCeeeeeeeCCC--CCeEEEEEecCCCCCCCCcEEEEEEecCCCCeee-eEE-
Q 004816 223 IVAIALNGQN----------IQVLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYK-RVC- 288 (729)
Q Consensus 223 l~~~dl~~g~----------~~~lt~~~~~~~~~~~SPD--G~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~-~~~- 288 (729)
|.++|+.+++ ...+...........|+|| |+.|+... ....|.++|+. +++... ...
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--------~dg~v~iwd~~-~~~~~~~~~~~ 153 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG--------NDGILRLYDAL-EPSDLRSWTLT 153 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--------TTCEEEEEECS-STTCTTCCEEE
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec--------CCCcEEEecCC-ChHHhcccccc
Confidence 8888888753 2233334556778899999 99888766 23459999987 454211 111
Q ss_pred -----ec----CCCCCccccccCceeCCC---CcEEEEEecCCCceEEEEEEcCCCeEEEeec---cCccccCCcccccC
Q 004816 289 -----VA----GFDPTIVESPTEPKWSSK---GELFFVTDRKNGFWNLHKWIESNNEVLAIYS---LDAEFSRPLWVFGI 353 (729)
Q Consensus 289 -----~~----~~~~~~~~~~~~~~wspD---G~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~---~~~~~~~~~w~~~~ 353 (729)
.. ... ..+..+.|+|+ +++++.... .+ .+...+...++...+.. ....+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~l~~~~~-~~--~~~~~~~~~~~~~~~~~~~~h~~~i~-------- 218 (351)
T 3f3f_A 154 SEMKVLSIPPANHL----QSDFCLSWCPSRFSPEKLAVSAL-EQ--AIIYQRGKDGKLHVAAKLPGHKSLIR-------- 218 (351)
T ss_dssp EEEESCSCCCSSCS----CCCEEEEECCCSSSCCEEEEEET-TE--EEEEEECTTSCEEEEEECCCCCSCEE--------
T ss_pred ccccccccccCCcc----cceeEEEeccCCCCCcEEEEecC-CC--cEEEEccCCCceeeeeecCCCCccee--------
Confidence 00 111 34566789997 665444444 23 23334445555433332 222222
Q ss_pred cceeeeeecCCCC---EEEEEEEECCeEEEEEEEC
Q 004816 354 NSYEIIQSHGEKN---LIACSYRQNGRSYLGILDD 385 (729)
Q Consensus 354 ~~~~~l~~~~~~~---~l~~~s~~~g~~~ly~~d~ 385 (729)
.+.|.+ ++. .++++...+|...||-+..
T Consensus 219 -~~~~~p---~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 219 -SISWAP---SIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp -EEEECC---CSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred -EEEECC---CCCCcceEEEEEcCCCeEEEEeCCC
Confidence 233432 331 6777778888888887653
No 400
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.55 E-value=1.2e-06 Score=95.24 Aligned_cols=187 Identities=13% Similarity=0.067 Sum_probs=109.5
Q ss_pred eeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCC-----eeeeeeeCCCCCeEEEEEecCCCC
Q 004816 191 VSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSD-----FYAFPRMDPRGERMAWIEWHHPNM 265 (729)
Q Consensus 191 ~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~-----~~~~~~~SPDG~~la~~~~~~~~~ 265 (729)
..+...+|||||++|+....+ ..+.+++.++ ....+. ... .+...+|||||+.||..+
T Consensus 86 ~~V~~vawSPdG~~LAs~s~d---------g~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs------ 148 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNN---------GNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN------ 148 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETT---------SCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE------
T ss_pred CcEEEEEECCCCCEEEEEeCC---------CcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEc------
Confidence 456888999999998877654 3477788654 233333 222 366789999999998776
Q ss_pred CCCCcEEEEEEecCCCCee-----eeEEe----cCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEE-
Q 004816 266 PWDKAELWVGYISENGDVY-----KRVCV----AGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL- 335 (729)
Q Consensus 266 ~~~~~~l~~~d~~~~g~~~-----~~~~~----~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~- 335 (729)
....|.++|+. ++... ....+ .++. ..+..++|+||| ++..+.+ ..+.++|+++++..
T Consensus 149 --~DGtVkIWd~~-~~~l~~~~~i~l~ti~~~~~gh~----~~V~sVawSPdg-Laass~D----~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 149 --EDGELQFFSIR-KNSENTPEFYFESSIRLSDAGSK----DWVTHIVWYEDV-LVAALSN----NSVFSMTVSASSHQP 216 (588)
T ss_dssp --TTSEEEEEECC-CCTTTCCCCEEEEEEECSCTTCC----CCEEEEEEETTE-EEEEETT----CCEEEECCCSSSSCC
T ss_pred --CCCEEEEEECC-CCccccccceeeeeeeccccccc----ccEEEEEEcCCc-EEEEeCC----CeEEEEECCCCcccc
Confidence 34568899988 56421 12333 3333 456778999999 5544432 44666677776532
Q ss_pred ---Eeec-cCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeec-cCCcceEEe-e--eeC
Q 004816 336 ---AIYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLD-IPFTDIDNI-T--LGN 407 (729)
Q Consensus 336 ---~l~~-~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt-~~~~~v~~~-~--~~~ 407 (729)
.+.. ....+. ++.|. + +.++.++ ++ .|.+++.++++...+. .....+.++ . .++
T Consensus 217 ~~~tL~~~h~~~V~---------svaFs----g-~~LASa~--~~--tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d 278 (588)
T 2j04_A 217 VSRMIQNASRRKIT---------DLKIV----D-YKVVLTC--PG--YVHKIDLKNYSISSLKTGSLENFHIIPLNHEKE 278 (588)
T ss_dssp CEEEEECCCSSCCC---------CEEEE----T-TEEEEEC--SS--EEEEEETTTTEEEEEECSCCSCCCEEEETTCSS
T ss_pred ceeeecccccCcEE---------EEEEE----C-CEEEEEe--CC--eEEEEECCCCeEEEEEcCCCceEEEEEeeeCCC
Confidence 2321 111222 33442 2 4444333 44 5666688888875554 334455555 4 555
Q ss_pred CEEEEEEeCCCCCceEEEE
Q 004816 408 DCLFVEGASGVEPSSVAKV 426 (729)
Q Consensus 408 ~~~~~~~~~~~~~~~ly~~ 426 (729)
+..+..+...+. .+|.+
T Consensus 279 ~~~La~a~edG~--klw~~ 295 (588)
T 2j04_A 279 STILLMSNKTSY--KVLLE 295 (588)
T ss_dssp CEEEEECSSCEE--EEEES
T ss_pred CCEEEEEcCCCC--EEEee
Confidence 555555543333 56664
No 401
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.55 E-value=3.1e-08 Score=110.40 Aligned_cols=127 Identities=20% Similarity=0.218 Sum_probs=81.9
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCcccc-chhhhHHHhhC-CcEEEEecCCCCC-CCchhHHHhhccCC
Q 004816 471 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTSR-GWAFVDVNYGGST-GYGREFRERLLGRW 547 (729)
Q Consensus 471 ~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~-~~~~~~~la~~-G~~v~~~d~rGs~-g~g~~~~~~~~~~~ 547 (729)
.+...+|.|...... ...++.|+||++|||+....... +.. ..|+++ |+.|+.+|||... |+..... ....
T Consensus 111 cL~l~v~~P~~~~~~-~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~---~~~~ 184 (574)
T 3bix_A 111 CLYLNIYVPTEDDIR-DSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGD---QAAK 184 (574)
T ss_dssp CCEEEEEEEC---------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSS---SSCC
T ss_pred CCEEEEEECCCCCcC-CCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCC---CCCC
Confidence 355566777652100 01346799999999865433322 322 456665 6999999999532 1110000 0011
Q ss_pred CcccHHHHHHHHHHHHhC---CCCCCCcEEEEEcChHHHHHHHHHh-C--C-CcceEEEEecc
Q 004816 548 GIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAALA-F--R-DTFKAGASLYG 603 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~-~--~-~~~~a~v~~~~ 603 (729)
+...+.|+.++++|+.++ ...|+++|.|+|+|+||.++..++. . . ..|+++|+.+|
T Consensus 185 ~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg 247 (574)
T 3bix_A 185 GNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSG 247 (574)
T ss_dssp CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESC
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcC
Confidence 223489999999999885 3468999999999999999988876 2 2 57999999886
No 402
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.55 E-value=1.4e-05 Score=85.10 Aligned_cols=163 Identities=13% Similarity=0.110 Sum_probs=104.3
Q ss_pred EEEECCEEEEEECCCCcEEEEeCCCCC--CCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEE
Q 004816 150 FRIFGDTVIFSNYKDQRLYKHSIDSKD--SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (729)
Q Consensus 150 ~~~~~~~i~~~~~~~~~l~~~d~~~~~--~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~d 227 (729)
|.+.++.|+|++...+.|+++++++.. ...+.+.... .......++++.++.|+++... ...|.+++
T Consensus 119 ~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~---~~~p~glavD~~~~~lY~~d~~--------~~~I~~~~ 187 (400)
T 3p5b_L 119 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD---IQAPDGLAVDWIHSNIYWTDSV--------LGTVSVAD 187 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS---CSCEEEEEEETTTTEEEEEETT--------TTEEEEEC
T ss_pred eeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC---CCCcccEEEEecCCceEEEECC--------CCeEEEEe
Confidence 333367899998888899999997510 0123332211 1234567888878877666432 25799999
Q ss_pred cCCCceEEeee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeC
Q 004816 228 LNGQNIQVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 306 (729)
Q Consensus 228 l~~g~~~~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ws 306 (729)
++++..+.+.. +...-.+.+..|.+.+|+|+.+.. ...|++++++ |... ..+....- .....++++
T Consensus 188 ~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~------~~~I~~~~~d--G~~~-~~~~~~~l----~~P~glavd 254 (400)
T 3p5b_L 188 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------PAKIKKGGLN--GVDI-YSLVTENI----QWPNGITLD 254 (400)
T ss_dssp TTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS------SCCEEEEETT--SCSC-EEEECSSC----SCEEEEEEE
T ss_pred CCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC------CCEEEEEeCC--CCcc-EEEEECCC----CceEEEEEE
Confidence 99877766654 334456678999989999987543 2359999987 3321 22333221 345678899
Q ss_pred CCCc-EEEEEecCCCceEEEEEEcCCCeEEEeec
Q 004816 307 SKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYS 339 (729)
Q Consensus 307 pDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~ 339 (729)
++++ |||. +. +...|+++|++++..+.+..
T Consensus 255 ~~~~~lY~a-D~--~~~~I~~~d~dG~~~~~~~~ 285 (400)
T 3p5b_L 255 LLSGRLYWV-DS--KLHSISSIDVNGGNRKTILE 285 (400)
T ss_dssp TTTTEEEEE-ET--TTTEEEEEETTSCCCEEEEE
T ss_pred eCCCEEEEE-EC--CCCEEEEEeCCCCccEEEEe
Confidence 8877 6655 43 45689999998876666653
No 403
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.55 E-value=1.5e-05 Score=83.00 Aligned_cols=189 Identities=10% Similarity=-0.009 Sum_probs=110.1
Q ss_pred CCcEEEEeCCCCCCC-CeecCCCCCCCceeeecceecC--CCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeC-
Q 004816 164 DQRLYKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDP--RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSG- 239 (729)
Q Consensus 164 ~~~l~~~d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SP--dG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~- 239 (729)
++.+.++++.+ ++ .+.+.... ...+....|+| +|+.++....+ ..|.++|+.+++...+...
T Consensus 103 ~~~~~~~~~~~--~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~s~s~d---------g~i~~wd~~~~~~~~~~~~~ 168 (343)
T 3lrv_A 103 GNQITILDSKT--NKVLREIEVDS---ANEIIYMYGHNEVNTEYFIWADNR---------GTIGFQSYEDDSQYIVHSAK 168 (343)
T ss_dssp TTEEEEEETTT--CCEEEEEECCC---SSCEEEEECCC---CCEEEEEETT---------CCEEEEESSSSCEEEEECCC
T ss_pred cCceEEeecCC--cceeEEeecCC---CCCEEEEEcCCCCCCCEEEEEeCC---------CcEEEEECCCCcEEEEEecC
Confidence 44566666665 44 23333221 23467888999 99987766543 4588999998887554422
Q ss_pred -CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecC-CCCCccccccCceeCCCCcEEEEEec
Q 004816 240 -SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG-FDPTIVESPTEPKWSSKGELFFVTDR 317 (729)
Q Consensus 240 -~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~-~~~~~~~~~~~~~wspDG~l~~~~~~ 317 (729)
.......+|+|||+.|+..+ ....|.++|+. +++.. ...+.. .. ..+..+.|+|||++++....
T Consensus 169 ~~~~i~~~~~~pdg~~lasg~--------~dg~i~iwd~~-~~~~~-~~~~~~~h~----~~v~~l~fs~~g~~l~s~~~ 234 (343)
T 3lrv_A 169 SDVEYSSGVLHKDSLLLALYS--------PDGILDVYNLS-SPDQA-SSRFPVDEE----AKIKEVKFADNGYWMVVECD 234 (343)
T ss_dssp SSCCCCEEEECTTSCEEEEEC--------TTSCEEEEESS-CTTSC-CEECCCCTT----SCEEEEEECTTSSEEEEEES
T ss_pred CCCceEEEEECCCCCEEEEEc--------CCCEEEEEECC-CCCCC-ccEEeccCC----CCEEEEEEeCCCCEEEEEeC
Confidence 23466789999999887554 22349999998 66542 133444 44 56778899999994444444
Q ss_pred CCCceEEEEEEcCCCeEEE-eeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceE
Q 004816 318 KNGFWNLHKWIESNNEVLA-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 391 (729)
Q Consensus 318 ~~g~~~l~~~d~~~g~~~~-l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~ 391 (729)
+ .|.++|+.+++... +..... .........+.|.+ +++.|+..+..++..+||.++...+.+.
T Consensus 235 --~--~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~g~~l~~~s~~d~~i~v~~~~~~~~~~~ 298 (343)
T 3lrv_A 235 --Q--TVVCFDLRKDVGTLAYPTYTI----PEFKTGTVTYDIDD---SGKNMIAYSNESNSLTIYKFDKKTKNWT 298 (343)
T ss_dssp --S--BEEEEETTSSTTCBSSCCCBC---------CCEEEEECT---TSSEEEEEETTTTEEEEEEECTTTCSEE
T ss_pred --C--eEEEEEcCCCCcceeeccccc----ccccccceEEEECC---CCCEEEEecCCCCcEEEEEEcccccceE
Confidence 3 67788887764322 211000 00000001244543 5555554433378888888765555444
No 404
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.53 E-value=4.8e-06 Score=86.93 Aligned_cols=151 Identities=9% Similarity=0.061 Sum_probs=95.1
Q ss_pred CEEEEEECCCCcEEEEeCCCCCCCCeecCCCC-CCCceeeecceecCC----CCEEEEEEeccCCCCCCcceEEEEEEcC
Q 004816 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDY-GEPLVSYADGIFDPR----FNRYVTVREDRRQDALNSTTEIVAIALN 229 (729)
Q Consensus 155 ~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~-~~~~~~~~~~~~SPd----G~~l~~~~~~~~~~~~~~~~~l~~~dl~ 229 (729)
+..++....++.|.+|++.++ ...+.+.... ......+...+|+|+ |+.|+....+ ..|.++|+.
T Consensus 34 ~~~~~~~~~~~~v~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d---------g~i~v~d~~ 103 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECHSQ-GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR---------GIIRIINPI 103 (366)
T ss_dssp SCEEEEEEETTEEEEEEECGG-GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT---------CEEEEECTT
T ss_pred CceEEEECCCCEEEEEEcCCC-cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC---------CEEEEEEch
Confidence 444555555668999998862 3333333210 001244678889999 5555544432 479999999
Q ss_pred CCceEEeee-CCCeeeeeeeCC-CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEe---cCCCCCccccccCce
Q 004816 230 GQNIQVLVS-GSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV---AGFDPTIVESPTEPK 304 (729)
Q Consensus 230 ~g~~~~lt~-~~~~~~~~~~SP-DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~---~~~~~~~~~~~~~~~ 304 (729)
+++...... ........+|+| |++.|+..+. ...|.++|+. +++. ...+ .... ..+..+.
T Consensus 104 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~--------dg~i~iwd~~-~~~~--~~~~~~~~~~~----~~v~~~~ 168 (366)
T 3k26_A 104 TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK--------DHALRLWNIQ-TDTL--VAIFGGVEGHR----DEVLSAD 168 (366)
T ss_dssp TCCEEEEEESCCSCEEEEEECSSCTTEEEEEET--------TSCEEEEETT-TTEE--EEEECSTTSCS----SCEEEEE
T ss_pred hceEeeeecCCCCcEEEEEECCCCCCEEEEEeC--------CCeEEEEEee-cCeE--EEEeccccccc----CceeEEE
Confidence 887654433 455677889999 8888876652 2349999998 6654 3344 3343 5667889
Q ss_pred eCCCCcEEEEEecCCCceEEEEEEcCCCe
Q 004816 305 WSSKGELFFVTDRKNGFWNLHKWIESNNE 333 (729)
Q Consensus 305 wspDG~l~~~~~~~~g~~~l~~~d~~~g~ 333 (729)
|+|||++++.... .+ .|.++|+.+++
T Consensus 169 ~~~~~~~l~~~~~-dg--~i~i~d~~~~~ 194 (366)
T 3k26_A 169 YDLLGEKIMSCGM-DH--SLKLWRINSKR 194 (366)
T ss_dssp ECTTSSEEEEEET-TS--CEEEEESCSHH
T ss_pred ECCCCCEEEEecC-CC--CEEEEECCCCc
Confidence 9999994444444 34 46666776654
No 405
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.53 E-value=2.5e-06 Score=92.18 Aligned_cols=148 Identities=8% Similarity=0.064 Sum_probs=85.7
Q ss_pred EEEEEECCCCcEEEEeCCCCCCC------------CeecCCCCCCCc----------eeeecceecCCC--CEEEEEEec
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSS------------PLPITPDYGEPL----------VSYADGIFDPRF--NRYVTVRED 211 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~------------~~~lt~~~~~~~----------~~~~~~~~SPdG--~~l~~~~~~ 211 (729)
.++++...++.|.+|++.+ +. ...+.... .. ..+...+|+|++ ..|+....+
T Consensus 41 ~~la~g~~dg~v~iw~~~~--~~~~~~~~~~~~~~~~~~~~h~--~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d 116 (447)
T 3dw8_B 41 ELLATGDKGGRVVIFQQEQ--ENKIQSHSRGEYNVYSTFQSHE--PEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND 116 (447)
T ss_dssp SEEEEEETTSEEEEEEECC-------CCCCCCEEEEEEEECCC--CEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECS
T ss_pred CEEEEEcCCCeEEEEEecC--CCCCCcccccceeEeccccccc--ccccccccccccCceEEEEEcCCCCcceEEEeCCC
Confidence 3445555678899999886 43 22233220 00 336778999998 666665443
Q ss_pred cCCCCCCcceEEEEEEcCCCceE----------------------------------------Ee-eeCCCeeeeeeeCC
Q 004816 212 RRQDALNSTTEIVAIALNGQNIQ----------------------------------------VL-VSGSDFYAFPRMDP 250 (729)
Q Consensus 212 ~~~~~~~~~~~l~~~dl~~g~~~----------------------------------------~l-t~~~~~~~~~~~SP 250 (729)
..|.++++.+++.. .+ ..........+|+|
T Consensus 117 ---------~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 117 ---------KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp ---------SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ---------CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 24666666543221 11 12234456789999
Q ss_pred CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEE-------ecCCCCCccccccCceeCCCC-cEEEEEecCCCce
Q 004816 251 RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC-------VAGFDPTIVESPTEPKWSSKG-ELFFVTDRKNGFW 322 (729)
Q Consensus 251 DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~-------~~~~~~~~~~~~~~~~wspDG-~l~~~~~~~~g~~ 322 (729)
||+.|+.. . ...|.++|+. .+.. .... +.+.. ..+..+.|+||| ++++.... .+
T Consensus 188 ~~~~l~s~--~-------d~~i~iwd~~-~~~~-~~~~~~~~~~~~~~~~----~~v~~~~~~p~~~~~l~s~~~-dg-- 249 (447)
T 3dw8_B 188 DYETYLSA--D-------DLRINLWHLE-ITDR-SFNIVDIKPANMEELT----EVITAAEFHPNSCNTFVYSSS-KG-- 249 (447)
T ss_dssp TSSEEEEE--C-------SSEEEEEETT-EEEE-EEEEEECCCSSGGGCC----CCEEEEEECSSCTTEEEEEET-TS--
T ss_pred CCCEEEEe--C-------CCeEEEEECC-CCCc-eeeeeecccccccccC----cceEEEEECCCCCcEEEEEeC-CC--
Confidence 99988753 2 2348888887 2221 1221 22333 456778999999 66555554 34
Q ss_pred EEEEEEcCCCeE
Q 004816 323 NLHKWIESNNEV 334 (729)
Q Consensus 323 ~l~~~d~~~g~~ 334 (729)
.|.++|+.+++.
T Consensus 250 ~i~iwd~~~~~~ 261 (447)
T 3dw8_B 250 TIRLCDMRASAL 261 (447)
T ss_dssp CEEEEETTTCSS
T ss_pred eEEEEECcCCcc
Confidence 466678777663
No 406
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.53 E-value=1.3e-05 Score=82.71 Aligned_cols=200 Identities=11% Similarity=-0.009 Sum_probs=115.6
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC---CEEEEEECCC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG---DTVIFSNYKD 164 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~ 164 (729)
..+..+.|+| ++.++- .. .+|...+|..... .....+... -..+.....+..++. +.++++...+
T Consensus 12 ~~v~~~~~~~~~~~l~~-~~---~dg~i~iw~~~~~--~~~~~~~~~-----~~~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVAT-CS---SDQHIKVFKLDKD--TSNWELSDS-----WRAHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp SCEEEEEECSSSSEEEE-EE---TTSEEEEEEECSS--SCCEEEEEE-----EECCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cceeEEEEcCCCCEEEE-ee---CCCeEEEEECCCC--CCcceecce-----eccCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 3567899999 554443 33 4678888877544 111111100 000122234445543 4566666678
Q ss_pred CcEEEEeCCCCCCC----------CeecCCCCCCCceeeecceecCC--CCEEEEEEeccCCCCCCcceEEEEEEcCCCc
Q 004816 165 QRLYKHSIDSKDSS----------PLPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (729)
Q Consensus 165 ~~l~~~d~~~~~~~----------~~~lt~~~~~~~~~~~~~~~SPd--G~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~ 232 (729)
+.|.+|++.+ +. ...+... ...+...+|+|+ |+.|+....+ ..|.++|+.+++
T Consensus 81 g~v~vwd~~~--~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~~d---------g~v~iwd~~~~~ 145 (351)
T 3f3f_A 81 KTVKLWEEDP--DQEECSGRRWNKLCTLNDS----KGSLYSVKFAPAHLGLKLACLGND---------GILRLYDALEPS 145 (351)
T ss_dssp SCEEEEEECT--TSCTTSSCSEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------CEEEEEECSSTT
T ss_pred CeEEEEecCC--CcccccccCcceeeeeccc----CCceeEEEEcCCCCCcEEEEecCC---------CcEEEecCCChH
Confidence 8899999986 42 1222222 345678899999 9987766543 468899988765
Q ss_pred eEE-ee-------------eCCCeeeeeeeCCC---CCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCC
Q 004816 233 IQV-LV-------------SGSDFYAFPRMDPR---GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPT 295 (729)
Q Consensus 233 ~~~-lt-------------~~~~~~~~~~~SPD---G~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~ 295 (729)
... +. ..........|+|+ ++.|+.... ...+...+.. ++.......+.+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~h~-- 214 (351)
T 3f3f_A 146 DLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL--------EQAIIYQRGK-DGKLHVAAKLPGHK-- 214 (351)
T ss_dssp CTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET--------TEEEEEEECT-TSCEEEEEECCCCC--
T ss_pred HhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecC--------CCcEEEEccC-CCceeeeeecCCCC--
Confidence 211 11 11233456789998 887776652 2234444444 45543344455554
Q ss_pred ccccccCceeCCCC----cEEEEEecCCCceEEEEEE
Q 004816 296 IVESPTEPKWSSKG----ELFFVTDRKNGFWNLHKWI 328 (729)
Q Consensus 296 ~~~~~~~~~wspDG----~l~~~~~~~~g~~~l~~~d 328 (729)
..+..+.|+|+| ++++.... .+.-.+|-+.
T Consensus 215 --~~i~~~~~~p~~~~~~~~l~s~~~-dg~i~iwd~~ 248 (351)
T 3f3f_A 215 --SLIRSISWAPSIGRWYQLIATGCK-DGRIRIFKIT 248 (351)
T ss_dssp --SCEEEEEECCCSSCSSEEEEEEET-TSCEEEEEEE
T ss_pred --cceeEEEECCCCCCcceEEEEEcC-CCeEEEEeCC
Confidence 566788999998 65555554 4655555443
No 407
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.51 E-value=2.7e-05 Score=83.23 Aligned_cols=205 Identities=11% Similarity=0.033 Sum_probs=115.3
Q ss_pred CCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce
Q 004816 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (729)
Q Consensus 154 ~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~ 233 (729)
++.|++.+.....|+++++++ +....+.... .... ++|+|+|+.|+.+.... ...|++++.+++..
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~--g~~~~~~~~~----~~~~-ia~~~~g~~l~~~d~~~-------~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDD--NKVTTVHPGF----KGGK-PAVTKDKQRVYSIGWEG-------THTVYVYMKASGWA 206 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTT--TEEEEEEETC----CBCB-CEECTTSSEEEEEBSST-------TCEEEEEEGGGTTC
T ss_pred CCCEEEEecCCCcEEEEECCC--CEEEEeeccC----CCCc-eeEecCCCcEEEEecCC-------CceEEEEEcCCCce
Confidence 346777776667999999987 6665554331 1223 88999999766554322 13799999987654
Q ss_pred -EEe----eeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEE--ecCCCCCcccccc-Ccee
Q 004816 234 -QVL----VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC--VAGFDPTIVESPT-EPKW 305 (729)
Q Consensus 234 -~~l----t~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~--~~~~~~~~~~~~~-~~~w 305 (729)
+.+ ........+.+++|++..|++.. . ...|+++|.+ ++....... ..+.. . .... .++|
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d--~------~~~I~~~d~~-~~~~~~~~~~~~~g~~-~--~~P~~~ia~ 274 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVD--S------NKNFGRFNVK-TQEVTLIKQLELSGSL-G--TNPGPYLIY 274 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEEC--T------TCEEEEEETT-TCCEEEEEECCCCSCC-C--CSSCCEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEE--C------CCcEEEEECC-CCCEEEEecccccCCC-C--CCccccEEE
Confidence 334 11233445679999777787732 2 2469999987 555311100 11111 0 1112 7889
Q ss_pred CCCCc-EEEEEecCCCceEEEEEEcCCCeEEEeeccC--ccccC-C---cccccCcceeeeeecCCCCEEEEEEEEC-Ce
Q 004816 306 SSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLD--AEFSR-P---LWVFGINSYEIIQSHGEKNLIACSYRQN-GR 377 (729)
Q Consensus 306 spDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~--~~~~~-~---~w~~~~~~~~~l~~~~~~~~l~~~s~~~-g~ 377 (729)
+|++. ||+. +. +...|+++++++. ...+.... ..... + .-......+.+.+ ++ .||++. . +.
T Consensus 275 ~p~~g~lyv~-d~--~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~---dG-~lyvad--~~~~ 344 (409)
T 3hrp_A 275 YFVDSNFYMS-DQ--NLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE---DG-NFYIVD--GFKG 344 (409)
T ss_dssp ETTTTEEEEE-ET--TTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT---TC-CEEEEE--TTTT
T ss_pred eCCCCEEEEE-eC--CCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC---CC-CEEEEe--CCCC
Confidence 99655 5544 43 4467999998765 33333211 00000 0 0001123445542 44 466553 3 55
Q ss_pred EEEEEEECCCCceEeec
Q 004816 378 SYLGILDDFGHSLSLLD 394 (729)
Q Consensus 378 ~~ly~~d~~~g~~~~lt 394 (729)
..|.++++.+|.+..+.
T Consensus 345 ~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 345 YCLRKLDILDGYVSTVA 361 (409)
T ss_dssp CEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCEEEEEe
Confidence 67888886677766554
No 408
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.50 E-value=1.9e-07 Score=99.64 Aligned_cols=172 Identities=14% Similarity=0.067 Sum_probs=107.0
Q ss_pred CCCEEEEEcCCCCCCccccchhhhHHHhhCCc---EEEEecCCCCCCC----------chh--HHH-------------h
Q 004816 491 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGW---AFVDVNYGGSTGY----------GRE--FRE-------------R 542 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~---~v~~~d~rGs~g~----------g~~--~~~-------------~ 542 (729)
..|.||++||...+ ...|..++..|+++|| .|+++|++|.+.+ |.. ... .
T Consensus 21 ~~ppVVLlHG~g~s--~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v 98 (484)
T 2zyr_A 21 DFRPVVFVHGLAGS--AGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKI 98 (484)
T ss_dssp CCCCEEEECCTTCC--GGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHH
T ss_pred CCCEEEEECCCCCC--HHHHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccc
Confidence 45679999998443 4567788899999999 6999999964421 000 000 0
Q ss_pred hcc---CCCcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CC---CcceEEEEeccccChhHHhhhcc
Q 004816 543 LLG---RWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FR---DTFKAGASLYGVADLSMLRAETH 615 (729)
Q Consensus 543 ~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~---~~~~a~v~~~~~~d~~~~~~~~~ 615 (729)
... .......+++.+.++.++++. +.+++.++||||||.+++.++. +| ++++++|++++..+..
T Consensus 99 ~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~~d------- 169 (484)
T 2zyr_A 99 LSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWGVD------- 169 (484)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCSEE-------
T ss_pred ccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccccc-------
Confidence 000 000123567777777777653 3378999999999999999988 76 4899999999876511
Q ss_pred hhhhhhhhhhcCChhhhhhcCcccccCCCCCCEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCEEEEEECCCCcccCC
Q 004816 616 KFESRYIDNLVGSEKDYYEKSPINFVDKFSCPIILFQGLEDKV---VPPDQARKIYKALKENGLPVALVEYEGEQHGFRK 692 (729)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvL~i~G~~D~~---vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~ 692 (729)
. ....++|-+.|..|.. ..+.. .|+. ..+.+++++.+|....
T Consensus 170 -------------------~-------p~g~~~L~ilG~~d~~p~V~~pss------~L~~---ga~~v~i~~a~H~~ll 214 (484)
T 2zyr_A 170 -------------------A-------PEGIPTLAVFGNPKALPALGLPEE------KVVY---NATNVYFNNMTHVQLC 214 (484)
T ss_dssp -------------------C-------CTTSCEEEEEECGGGSCCSSCCSS------CCEE---TSEEEEETTCCHHHHH
T ss_pred -------------------c-------CcCCHHHHHhCCCCcCCcccChhH------hcCC---CceEEEECCCCccccc
Confidence 0 0134566666655431 10100 1110 2256678999997432
Q ss_pred cccHHHHHHHHHHHHHHH
Q 004816 693 AENIKFTLEQQMVFFARV 710 (729)
Q Consensus 693 ~~~~~~~~~~~~~fl~~~ 710 (729)
.+ .+..+.+++||...
T Consensus 215 -~d-p~v~~~Vl~fL~~~ 230 (484)
T 2zyr_A 215 -TS-PETFAVMFEFINGY 230 (484)
T ss_dssp -HC-HHHHHHHHHHHHSS
T ss_pred -cC-HHHHHHHHHHhccc
Confidence 12 34556688888753
No 409
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.50 E-value=9.2e-06 Score=82.69 Aligned_cols=235 Identities=12% Similarity=0.051 Sum_probs=134.4
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcE
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 167 (729)
..+..+.|+| ++.++... .++...+|.......++....+.. +......+.++++. +++...++.|
T Consensus 60 ~~v~~~~~~~~~~~l~~~~----~dg~i~~~~~~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~-l~~~~~d~~i 126 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGG----KDTMINGVPLFATSGEDPLYTLIG--------HQGNVCSLSFQDGV-VISGSWDKTA 126 (313)
T ss_dssp SCEEEEEEETTTTEEEEEE----TTSCEEEEETTCCTTSCC-CEECC--------CSSCEEEEEEETTE-EEEEETTSEE
T ss_pred ccEEEEEECCCCCEEEEec----CCCeEEEEEeeecCCCCcccchhh--------cccCEEEEEecCCE-EEEEeCCCCE
Confidence 3567889999 55554433 356767777654311111111111 12233456666654 4455567889
Q ss_pred EEEeCCCCCCCCeecCCCCCCCceeeecceecC-CCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee-CCCeeee
Q 004816 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS-GSDFYAF 245 (729)
Q Consensus 168 ~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SP-dG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~-~~~~~~~ 245 (729)
.+|+. . .....+... ...+....|+| +++.++....+ ..|.++|.. .....+.. .......
T Consensus 127 ~~~d~-~--~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~d---------~~i~i~d~~-~~~~~~~~~~~~~i~~ 189 (313)
T 3odt_A 127 KVWKE-G--SLVYNLQAH----NASVWDAKVVSFSENKFLTASAD---------KTIKLWQND-KVIKTFSGIHNDVVRH 189 (313)
T ss_dssp EEEET-T--EEEEEEECC----SSCEEEEEEEETTTTEEEEEETT---------SCEEEEETT-EEEEEECSSCSSCEEE
T ss_pred EEEcC-C--cEEEecccC----CCceeEEEEccCCCCEEEEEECC---------CCEEEEecC-ceEEEEeccCcccEEE
Confidence 99993 2 333444433 24456677877 88887666543 357888842 22333333 4456677
Q ss_pred eeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEE
Q 004816 246 PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLH 325 (729)
Q Consensus 246 ~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~ 325 (729)
..|+|||+ |+... ....|.++|+. +++. ...+.... ..+..+.|+|||+++.... . ..|.
T Consensus 190 ~~~~~~~~-~~~~~--------~dg~i~i~d~~-~~~~--~~~~~~~~----~~i~~~~~~~~~~l~~~~~--d--g~v~ 249 (313)
T 3odt_A 190 LAVVDDGH-FISCS--------NDGLIKLVDMH-TGDV--LRTYEGHE----SFVYCIKLLPNGDIVSCGE--D--RTVR 249 (313)
T ss_dssp EEEEETTE-EEEEE--------TTSEEEEEETT-TCCE--EEEEECCS----SCEEEEEECTTSCEEEEET--T--SEEE
T ss_pred EEEcCCCe-EEEcc--------CCCeEEEEECC-chhh--hhhhhcCC----ceEEEEEEecCCCEEEEec--C--CEEE
Confidence 89999998 55444 23459999998 6664 44455554 5667889999997443332 2 3577
Q ss_pred EEEcCCCeEEEeec-cCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCc
Q 004816 326 KWIESNNEVLAIYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 389 (729)
Q Consensus 326 ~~d~~~g~~~~l~~-~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~ 389 (729)
++|+.+++...... ....+....|.+ ++. + ++...+|...|| ++++++
T Consensus 250 iwd~~~~~~~~~~~~~~~~i~~~~~~~------------~~~-~-~~~~~dg~i~iw--~~~~~~ 298 (313)
T 3odt_A 250 IWSKENGSLKQVITLPAISIWSVDCMS------------NGD-I-IVGSSDNLVRIF--SQEKSR 298 (313)
T ss_dssp EECTTTCCEEEEEECSSSCEEEEEECT------------TSC-E-EEEETTSCEEEE--ESCGGG
T ss_pred EEECCCCceeEEEeccCceEEEEEEcc------------CCC-E-EEEeCCCcEEEE--eCCCCc
Confidence 77888876554442 222222233332 554 3 345667765555 555544
No 410
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.50 E-value=8.7e-06 Score=88.64 Aligned_cols=187 Identities=10% Similarity=-0.019 Sum_probs=112.2
Q ss_pred eEEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCC-CCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEE
Q 004816 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYG-EPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (729)
Q Consensus 149 ~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~-~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~d 227 (729)
.|+++|..|+.. ..++.+.+|+.+ +....+. +.. -+...+..++|||||+.|+...++ ..|-+++
T Consensus 92 awSPdG~~LAs~-s~dg~V~iwd~~---~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D---------GtVkIWd 157 (588)
T 2j04_A 92 KPSPIDDWMAVL-SNNGNVSVFKDN---KMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED---------GELQFFS 157 (588)
T ss_dssp EECSSSSCEEEE-ETTSCEEEEETT---EEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT---------SEEEEEE
T ss_pred EECCCCCEEEEE-eCCCcEEEEeCC---ceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC---------CEEEEEE
Confidence 344445555544 467789999864 4333344 210 001246789999999998777654 4688889
Q ss_pred cCCCce--------EEeeeC----CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCee-eeEEe-cCCC
Q 004816 228 LNGQNI--------QVLVSG----SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVY-KRVCV-AGFD 293 (729)
Q Consensus 228 l~~g~~--------~~lt~~----~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~-~~~~~-~~~~ 293 (729)
+.++.. ..+..+ .......+||||| |+..+.+ ..+++++++ ++... ....+ .+..
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D--------~tVrlWd~~-~~~~~~~~~tL~~~h~ 226 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN--------NSVFSMTVS-ASSHQPVSRMIQNASR 226 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT--------CCEEEECCC-SSSSCCCEEEEECCCS
T ss_pred CCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC--------CeEEEEECC-CCccccceeeeccccc
Confidence 988752 344221 2467788999999 5544422 338888988 45431 12233 3443
Q ss_pred CCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCcccccCcceee--eeecCCCCEEEE
Q 004816 294 PTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEI--IQSHGEKNLIAC 370 (729)
Q Consensus 294 ~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~--l~~~~~~~~l~~ 370 (729)
..+..++|+ |+.+..+.. ..|.++|..+++...+. .....+. ++.| . +++..+.
T Consensus 227 ----~~V~svaFs--g~~LASa~~----~tIkLWd~~~~~~~~~~~gh~~~V~---------~va~~~s----~d~~~La 283 (588)
T 2j04_A 227 ----RKITDLKIV--DYKVVLTCP----GYVHKIDLKNYSISSLKTGSLENFH---------IIPLNHE----KESTILL 283 (588)
T ss_dssp ----SCCCCEEEE--TTEEEEECS----SEEEEEETTTTEEEEEECSCCSCCC---------EEEETTC----SSCEEEE
T ss_pred ----CcEEEEEEE--CCEEEEEeC----CeEEEEECCCCeEEEEEcCCCceEE---------EEEeeeC----CCCCEEE
Confidence 567889999 453333322 37888898888775554 2222222 2333 2 4556777
Q ss_pred EEEECCeEEEEEEE
Q 004816 371 SYRQNGRSYLGILD 384 (729)
Q Consensus 371 ~s~~~g~~~ly~~d 384 (729)
.+.++|. +||..+
T Consensus 284 ~a~edG~-klw~~d 296 (588)
T 2j04_A 284 MSNKTSY-KVLLED 296 (588)
T ss_dssp ECSSCEE-EEEESS
T ss_pred EEcCCCC-EEEeec
Confidence 7777888 888764
No 411
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.49 E-value=1.7e-05 Score=84.86 Aligned_cols=206 Identities=12% Similarity=0.040 Sum_probs=118.4
Q ss_pred eecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEE
Q 004816 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAEL 272 (729)
Q Consensus 193 ~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l 272 (729)
...++|+|+|+ |+++ +.. ...|+++|++++..+.+........ ++|+|||+.|++...+. ...|
T Consensus 133 P~~la~d~~g~-lyv~-d~~-------~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~------~~~I 196 (409)
T 3hrp_A 133 MWGIAAVGNNT-VLAY-QRD-------DPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEG------THTV 196 (409)
T ss_dssp EEEEEECSTTE-EEEE-ETT-------TTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSST------TCEE
T ss_pred ceEEEEeCCCC-EEEE-ecC-------CCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCC------CceE
Confidence 36778999998 4444 432 2579999999988887765543334 89999999887766322 1269
Q ss_pred EEEEecCCCCeeeeEE--e-cCCCCCccccccCceeCC-CCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCc
Q 004816 273 WVGYISENGDVYKRVC--V-AGFDPTIVESPTEPKWSS-KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPL 348 (729)
Q Consensus 273 ~~~d~~~~g~~~~~~~--~-~~~~~~~~~~~~~~~wsp-DG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 348 (729)
++++.. ++.. ...+ . .... ..+..++++| +|.||+ .+. ...|+++|++++....+.... ......
T Consensus 197 ~~~d~~-~~~~-~~~~g~~~~~~~----~~p~~iav~p~~g~lyv-~d~---~~~I~~~d~~~~~~~~~~~~~-~~g~~~ 265 (409)
T 3hrp_A 197 YVYMKA-SGWA-PTRIGQLGSTFS----GKIGAVALDETEEWLYF-VDS---NKNFGRFNVKTQEVTLIKQLE-LSGSLG 265 (409)
T ss_dssp EEEEGG-GTTC-EEEEEECCTTSC----SCCCBCEECTTSSEEEE-ECT---TCEEEEEETTTCCEEEEEECC-CCSCCC
T ss_pred EEEEcC-CCce-eEEeeeccchhc----CCcEEEEEeCCCCeEEE-EEC---CCcEEEEECCCCCEEEEeccc-ccCCCC
Confidence 999987 4432 1112 1 2122 4456789999 555776 433 347999999888765542110 000111
Q ss_pred ccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccC--------------CcceEEe-eeeCCEEEEE
Q 004816 349 WVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIP--------------FTDIDNI-TLGNDCLFVE 413 (729)
Q Consensus 349 w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~--------------~~~v~~~-~~~~~~~~~~ 413 (729)
|.|. +.+.|.+ +++.||++.. +...|++++.++......... ......+ ..+++.+ |+
T Consensus 266 ~~P~-~~ia~~p---~~g~lyv~d~--~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~l-yv 338 (409)
T 3hrp_A 266 TNPG-PYLIYYF---VDSNFYMSDQ--NLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNF-YI 338 (409)
T ss_dssp CSSC-CEEEEET---TTTEEEEEET--TTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCE-EE
T ss_pred CCcc-ccEEEeC---CCCEEEEEeC--CCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCE-EE
Confidence 1110 1456653 4678887653 344688888876532222221 1123334 3334444 44
Q ss_pred EeCCCCCceEEEEEcCCCcc
Q 004816 414 GASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 414 ~~~~~~~~~ly~~d~~~~~~ 433 (729)
+.. .....|+++++.++++
T Consensus 339 ad~-~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 339 VDG-FKGYCLRKLDILDGYV 357 (409)
T ss_dssp EET-TTTCEEEEEETTTTEE
T ss_pred EeC-CCCCEEEEEECCCCEE
Confidence 432 0234688888767764
No 412
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.49 E-value=9.6e-06 Score=82.94 Aligned_cols=260 Identities=11% Similarity=0.039 Sum_probs=135.2
Q ss_pred CccCceEEcCCCcEEEE-------eecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC--CEEEE
Q 004816 89 KRLGGTAVDGHGRLIWL-------ESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG--DTVIF 159 (729)
Q Consensus 89 ~~~~~~~~~pg~~~~~~-------~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~i~~ 159 (729)
..++++.|++.+.+|+. +. ..+ .|++++.. +++.+.+.... ... .......+.++. +.+++
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~---~~~--~i~~~d~~-~g~~~~~~~~~--~~~--~~~~~~~i~~~~~~g~l~v 87 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGK---PAG--EILRIDLK-TGKKTVICKPE--VNG--YGGIPAGCQCDRDANQLFV 87 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTE---ECC--EEEEECTT-TCCEEEEECCE--ETT--EECCEEEEEECSSSSEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCC---CCC--EEEEEeCC-CCcEEEEEecc--cCC--CCCCCceEEEecCCCcEEE
Confidence 45689999985678887 33 123 36666644 23433332100 000 001122344443 45555
Q ss_pred EECCCCcEEEEeCCCCCCCCeec-CCCC-CCCceeeecceecCCCCEEEEEEeccCC-------CCCCcceEEEEEEcCC
Q 004816 160 SNYKDQRLYKHSIDSKDSSPLPI-TPDY-GEPLVSYADGIFDPRFNRYVTVREDRRQ-------DALNSTTEIVAIALNG 230 (729)
Q Consensus 160 ~~~~~~~l~~~d~~~~~~~~~~l-t~~~-~~~~~~~~~~~~SPdG~~l~~~~~~~~~-------~~~~~~~~l~~~dl~~ 230 (729)
... ...|++++.+ ++.+.+ .... ........++.++|||+.+ +....... ........|++++.+
T Consensus 88 ~~~-~~~l~~~d~~---g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~-v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 88 ADM-RLGLLVVQTD---GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLW-ITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp EET-TTEEEEEETT---SCEEECCSBCTTSCBCBCCCEEEECTTSCEE-EEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred EEC-CCCEEEEeCC---CCEEEEEeccCCCccccCCcCEEECCCCCEE-EEecCcccccccccccccCCCCeEEEECCC-
Confidence 543 3479999987 344444 3211 1111335778899999843 33321100 000112579999987
Q ss_pred CceEEeeeCCCeeeeeeeC----CCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeC
Q 004816 231 QNIQVLVSGSDFYAFPRMD----PRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 306 (729)
Q Consensus 231 g~~~~lt~~~~~~~~~~~S----PDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ws 306 (729)
++.+.+........+.+|+ |||+.|++.... ...|++++++.+++....................+.++
T Consensus 162 g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d 234 (314)
T 1pjx_A 162 GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP-------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD 234 (314)
T ss_dssp SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT-------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB
T ss_pred CCEEEeccCCCCcceEEEecccCCCCCEEEEEECC-------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC
Confidence 6666655443445678999 999988766522 24599998762354332222222110000123457899
Q ss_pred CCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECC
Q 004816 307 SKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDF 386 (729)
Q Consensus 307 pDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~ 386 (729)
+||++++.... ...|+++|+++++......... . ....+.+.+ +++.||+....++ .|++++++
T Consensus 235 ~~G~l~v~~~~---~~~i~~~d~~~g~~~~~~~~~~-----~---~~~~i~~~~---dg~~l~v~~~~~~--~l~~~~~~ 298 (314)
T 1pjx_A 235 EDNNLLVANWG---SSHIEVFGPDGGQPKMRIRCPF-----E---KPSNLHFKP---QTKTIFVTEHENN--AVWKFEWQ 298 (314)
T ss_dssp TTCCEEEEEET---TTEEEEECTTCBSCSEEEECSS-----S---CEEEEEECT---TSSEEEEEETTTT--EEEEEECS
T ss_pred CCCCEEEEEcC---CCEEEEEcCCCCcEeEEEeCCC-----C---CceeEEECC---CCCEEEEEeCCCC--eEEEEeCC
Confidence 99986655433 2368899998665332221110 0 112334432 5555766654333 57777765
Q ss_pred C
Q 004816 387 G 387 (729)
Q Consensus 387 ~ 387 (729)
.
T Consensus 299 ~ 299 (314)
T 1pjx_A 299 R 299 (314)
T ss_dssp S
T ss_pred C
Confidence 4
No 413
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.48 E-value=8.8e-05 Score=80.48 Aligned_cols=276 Identities=10% Similarity=0.030 Sum_probs=149.7
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEE---CCEEEEEECCCC
Q 004816 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF---GDTVIFSNYKDQ 165 (729)
Q Consensus 89 ~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~ 165 (729)
..+..+.|+|++ ...+.. .++...+|....+ +....+.. +.....+..+. ++..+++...++
T Consensus 163 ~~V~~l~~~~~~-~l~s~s---~dg~i~vwd~~~~---~~~~~~~~--------h~~~v~~l~~~~~~~~~~l~s~s~d~ 227 (464)
T 3v7d_B 163 GGVWALKYAHGG-ILVSGS---TDRTVRVWDIKKG---CCTHVFEG--------HNSTVRCLDIVEYKNIKYIVTGSRDN 227 (464)
T ss_dssp SCEEEEEECSTT-EEEEEE---TTSCEEEEETTTT---EEEEEECC--------CSSCEEEEEEEESSSCEEEEEEETTS
T ss_pred cCEEEEEEcCCC-EEEEEe---CCCCEEEEECCCC---cEEEEECC--------CCCccEEEEEecCCCCCEEEEEcCCC
Confidence 345678888733 333332 4577777876433 22222211 11122233333 336677777788
Q ss_pred cEEEEeCCCCCCCCeecCCCC-CC-----------------CceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEE
Q 004816 166 RLYKHSIDSKDSSPLPITPDY-GE-----------------PLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (729)
Q Consensus 166 ~l~~~d~~~~~~~~~~lt~~~-~~-----------------~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~d 227 (729)
.|.+|++.+ +......... .. .+....-..++|+|+.++....+ ..|.++|
T Consensus 228 ~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d---------~~i~vwd 296 (464)
T 3v7d_B 228 TLHVWKLPK--ESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD---------NTLIVWD 296 (464)
T ss_dssp CEEEEECCC--CCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT---------SCEEEEE
T ss_pred cEEEeeCCC--CcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC---------CeEEEEE
Confidence 999999986 4321110000 00 00000112468889987766543 3589999
Q ss_pred cCCCceEEee-eCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeC
Q 004816 228 LNGQNIQVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 306 (729)
Q Consensus 228 l~~g~~~~lt-~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ws 306 (729)
+.+++..... .........+|+|||+.|+..+. ...|.++|+. +++. ...+.+.. ..+..+.|+
T Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~--------dg~i~vwd~~-~~~~--~~~~~~h~----~~v~~~~~~ 361 (464)
T 3v7d_B 297 VAQMKCLYILSGHTDRIYSTIYDHERKRCISASM--------DTTIRIWDLE-NGEL--MYTLQGHT----ALVGLLRLS 361 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET--------TSCEEEEETT-TTEE--EEEECCCS----SCEEEEEEC
T ss_pred CCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC--------CCcEEEEECC-CCcE--EEEEeCCC----CcEEEEEEc
Confidence 9887664433 34455677899999998876652 2349999998 6654 44555554 455667776
Q ss_pred CCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECC
Q 004816 307 SKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDF 386 (729)
Q Consensus 307 pDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~ 386 (729)
++.++.... .+ .|.++|+.+++............ ...|.+ +++.++ +.. +|. |.++|..
T Consensus 362 --~~~l~s~s~-dg--~v~vwd~~~~~~~~~~~~~~~~~---------~~~~~~---~~~~l~-~~~-dg~--i~iwd~~ 420 (464)
T 3v7d_B 362 --DKFLVSAAA-DG--SIRGWDANDYSRKFSYHHTNLSA---------ITTFYV---SDNILV-SGS-ENQ--FNIYNLR 420 (464)
T ss_dssp --SSEEEEEET-TS--EEEEEETTTCCEEEEEECTTCCC---------EEEEEE---CSSEEE-EEE-TTE--EEEEETT
T ss_pred --CCEEEEEeC-CC--cEEEEECCCCceeeeecCCCCcc---------EEEEEe---CCCEEE-Eec-CCe--EEEEECC
Confidence 454444443 34 46667887765443332221111 123332 555444 443 664 5555777
Q ss_pred CCceEe--eccCCcceEEeeeeCCEEEEEEeCCCCCceEEEEE
Q 004816 387 GHSLSL--LDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVT 427 (729)
Q Consensus 387 ~g~~~~--lt~~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d 427 (729)
+++... +......+..+..+++.+++..+. ++..-++.+|
T Consensus 421 ~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~-~g~~~i~~ld 462 (464)
T 3v7d_B 421 SGKLVHANILKDADQIWSVNFKGKTLVAAVEK-DGQSFLEILD 462 (464)
T ss_dssp TCCEEESCTTTTCSEEEEEEEETTEEEEEEEE-TTEEEEEEEE
T ss_pred CCcEEehhhccCCCcEEEEEecCCEEEEEEEe-CCeEEEEEee
Confidence 777553 334455677775566666655543 3333344444
No 414
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.46 E-value=7.8e-05 Score=76.79 Aligned_cols=235 Identities=9% Similarity=-0.023 Sum_probs=135.8
Q ss_pred CceEEEEC--CEEEEEECCCCcEEEEeCCCCCCCC------eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCC
Q 004816 147 GGAFRIFG--DTVIFSNYKDQRLYKHSIDSKDSSP------LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALN 218 (729)
Q Consensus 147 ~~~~~~~~--~~i~~~~~~~~~l~~~d~~~~~~~~------~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~ 218 (729)
+.+.++++ ..++++...++.|.+||+.. .+. +.+... ...+....|+|||+.|+....+
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~--~~~~~~~~~~~l~~h----~~~V~~~~~s~dg~~l~s~~~d------- 107 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLTR--DETNYGIPQRALRGH----SHFVSDVVISSDGQFALSGSWD------- 107 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEECC--SSSCSEEEEEEECCC----SSCEEEEEECTTSSEEEEEETT-------
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCC--CCcccceeeEEEeCC----CCCEEEEEECCCCCEEEEEccc-------
Confidence 34445543 35777877888999999875 321 122322 3456788999999987766543
Q ss_pred cceEEEEEEcCCCceEEeee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCcc
Q 004816 219 STTEIVAIALNGQNIQVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIV 297 (729)
Q Consensus 219 ~~~~l~~~dl~~g~~~~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~ 297 (729)
..|++++...+....... .........++|+++.|+..+.+ ..+.++|+. .... ......+..
T Consensus 108 --~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d--------~~~~~~d~~-~~~~-~~~~~~~~~---- 171 (340)
T 4aow_A 108 --GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--------KTIKLWNTL-GVCK-YTVQDESHS---- 171 (340)
T ss_dssp --SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT--------SCEEEECTT-SCEE-EEECSSSCS----
T ss_pred --ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC--------CeEEEEEeC-CCce-EEEEecccc----
Confidence 468888888765544433 33445567899999988766522 337777765 3321 122222222
Q ss_pred ccccCceeCCCCc--EEEEEecCCCceEEEEEEcCCCeEEEeec-cCccccCCcccccCcceeeeeecCCCCEEEEEEEE
Q 004816 298 ESPTEPKWSSKGE--LFFVTDRKNGFWNLHKWIESNNEVLAIYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ 374 (729)
Q Consensus 298 ~~~~~~~wspDG~--l~~~~~~~~g~~~l~~~d~~~g~~~~l~~-~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~ 374 (729)
..+....|++++. +++.... .+ .|.++|..+++...... ....+. .+.|.+ +++ ++++...
T Consensus 172 ~~v~~~~~~~~~~~~~~~s~~~-d~--~i~i~d~~~~~~~~~~~~h~~~v~---------~~~~s~---~~~-~l~s~s~ 235 (340)
T 4aow_A 172 EWVSCVRFSPNSSNPIIVSCGW-DK--LVKVWNLANCKLKTNHIGHTGYLN---------TVTVSP---DGS-LCASGGK 235 (340)
T ss_dssp SCEEEEEECSCSSSCEEEEEET-TS--CEEEEETTTTEEEEEECCCSSCEE---------EEEECT---TSS-EEEEEET
T ss_pred CcccceEEccCCCCcEEEEEcC-CC--EEEEEECCCCceeeEecCCCCcEE---------EEEECC---CCC-EEEEEeC
Confidence 4455678888876 4444433 33 46667888876554432 222222 234432 444 5556666
Q ss_pred CCeEEEEEEECCCCceEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 375 NGRSYLGILDDFGHSLSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 375 ~g~~~ly~~d~~~g~~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
+|...|| |+.+++..........+..+ ..+++.++..+. . ..+.++|+.++.
T Consensus 236 Dg~i~iw--d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-d---~~i~iwd~~~~~ 288 (340)
T 4aow_A 236 DGQAMLW--DLNEGKHLYTLDGGDIINALCFSPNRYWLCAAT-G---PSIKIWDLEGKI 288 (340)
T ss_dssp TCEEEEE--ETTTTEEEEEEECSSCEEEEEECSSSSEEEEEE-T---TEEEEEETTTTE
T ss_pred CCeEEEE--EeccCceeeeecCCceEEeeecCCCCceeeccC-C---CEEEEEECCCCe
Confidence 7765555 66666544333334455555 444554444332 2 467888887765
No 415
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.45 E-value=6.2e-05 Score=77.75 Aligned_cols=226 Identities=8% Similarity=-0.078 Sum_probs=122.4
Q ss_pred CCcEEEEeCCCCCCCCeecC-C--CCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce-EEeeeC
Q 004816 164 DQRLYKHSIDSKDSSPLPIT-P--DYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI-QVLVSG 239 (729)
Q Consensus 164 ~~~l~~~d~~~~~~~~~~lt-~--~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~-~~lt~~ 239 (729)
++.|.++|.++ ++..+-. . ....-+....+..+ ++++++.+.... ..|.++|+++++. +.+ ..
T Consensus 16 ~~~l~~~d~~t--~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~~~--------~~v~viD~~t~~~~~~i-~~ 82 (328)
T 3dsm_A 16 NATLSYYDPAT--CEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVNNS--------HVIFAIDINTFKEVGRI-TG 82 (328)
T ss_dssp CBEEEEEETTT--TEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEGGG--------TEEEEEETTTCCEEEEE-EC
T ss_pred CceEEEEECCC--CEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEcCC--------CEEEEEECcccEEEEEc-CC
Confidence 45799999887 5433210 0 00000011233344 567765555432 5799999999887 445 33
Q ss_pred CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCC
Q 004816 240 SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKN 319 (729)
Q Consensus 240 ~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~ 319 (729)
.....+.+++||| +|++... . ...|+++|++ +++.... +..+....-......+.+ .++++|. ++. .
T Consensus 83 ~~~p~~i~~~~~g-~lyv~~~-~------~~~v~~iD~~-t~~~~~~-i~~g~~~~~~~~p~~i~~-~~~~lyv-~~~-~ 149 (328)
T 3dsm_A 83 FTSPRYIHFLSDE-KAYVTQI-W------DYRIFIINPK-TYEITGY-IECPDMDMESGSTEQMVQ-YGKYVYV-NCW-S 149 (328)
T ss_dssp CSSEEEEEEEETT-EEEEEEB-S------CSEEEEEETT-TTEEEEE-EECTTCCTTTCBCCCEEE-ETTEEEE-EEC-T
T ss_pred CCCCcEEEEeCCC-eEEEEEC-C------CCeEEEEECC-CCeEEEE-EEcCCccccCCCcceEEE-ECCEEEE-EcC-C
Confidence 3445667899998 6655442 1 3469999988 6765322 222220000013445666 3443544 443 1
Q ss_pred CceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECC--------eEEEEEEECCCCceE
Q 004816 320 GFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG--------RSYLGILDDFGHSLS 391 (729)
Q Consensus 320 g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g--------~~~ly~~d~~~g~~~ 391 (729)
....|.++|+++++......... .| ..+.+. .++.+|+....+. ...|+++|.+++++.
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g~---~p------~~i~~~----~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIGI---QP------TSLVMD----KYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECSS---CB------CCCEEC----TTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCeEEEEEEcCC---Cc------cceEEc----CCCCEEEEECCCccCCccccCCceEEEEECCCCeEE
Confidence 24579999999987654332211 11 233343 3455666654320 257999999988765
Q ss_pred -eeccCC-cceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 392 -LLDIPF-TDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 392 -~lt~~~-~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
.+..+. .....+ ...++..+|...+ .++++|.++++.
T Consensus 217 ~~~~~~~g~~p~~la~~~d~~~lyv~~~-----~v~~~d~~t~~~ 256 (328)
T 3dsm_A 217 KQFKFKLGDWPSEVQLNGTRDTLYWINN-----DIWRMPVEADRV 256 (328)
T ss_dssp EEEECCTTCCCEEEEECTTSCEEEEESS-----SEEEEETTCSSC
T ss_pred EEEecCCCCCceeEEEecCCCEEEEEcc-----EEEEEECCCCce
Confidence 443322 134444 3333344444432 799999988764
No 416
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.45 E-value=3.4e-05 Score=88.82 Aligned_cols=229 Identities=11% Similarity=0.054 Sum_probs=138.9
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCC----
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ---- 231 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g---- 231 (729)
.|+|.. ...|..+++++ .....|... ......+.+++.+++|+++.... ..|+++++++.
T Consensus 397 ~Ll~an--~~~Ir~i~l~~--~~~~~l~~~----~~~~~gl~~d~~~~~lY~sD~~~--------~~I~~~~l~g~~~~~ 460 (791)
T 3m0c_C 397 YLFFTN--RHEVRKMTLDR--SEYTSLIPN----LRNVVALDTEVASNRIYWSDLSQ--------RMICSTQLDRAHGVS 460 (791)
T ss_dssp EEEEEC--BSSEEEECTTS--CCCEEEECS----CSSEEEEEEETTTTEEEEEETTT--------TEEEEEEC-------
T ss_pred cccccc--ccceeEeeccC--CcceeeecC----CCceEEEeecccCCeeEEeeccc--------eeEEEEeccCCCCCc
Confidence 355553 34699999987 655555544 23345678899888876664332 57999999863
Q ss_pred ceEEeee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc
Q 004816 232 NIQVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 310 (729)
Q Consensus 232 ~~~~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~ 310 (729)
..+.+.. +.....+.++.+.++.|||+.. ....|++++++ |... ..++...- .....++..|.+.
T Consensus 461 ~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~-------~~~~I~v~~ld--G~~~-~~l~~~~l----~~P~gIaVDp~~g 526 (791)
T 3m0c_C 461 SYDTVISRDIQAPDGLAVDWIHSNIYWTDS-------VLGTVSVADTK--GVKR-KTLFRENG----SKPRAIVVDPVHG 526 (791)
T ss_dssp -CEEEECSSCSCCCEEEEETTTTEEEEEET-------TTTEEEEEETT--SSSE-EEEEECTT----CCEEEEEEETTTT
T ss_pred ceeEEEecCCCCcceeeeeecCCcEEEEec-------CCCeEEEEeCC--CCeE-EEEEeCCC----CCcceEEEecCCC
Confidence 3344433 4445567889999999998873 23569999987 4322 23333222 3446678888755
Q ss_pred -EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCc
Q 004816 311 -LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 389 (729)
Q Consensus 311 -l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~ 389 (729)
|||+ +. .....|+++++++...+.|.... + .| .+.+.+.+ .++.|||+- .+...|+++++++..
T Consensus 527 ~LYwt-D~-g~~~~I~~~~~dG~~~~~lv~~~--l---~~---P~GLavD~---~~~~LYwaD--~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 527 FMYWT-DW-GTPAKIKKGGLNGVDIYSLVTEN--I---QW---PNGITLDL---LSGRLYWVD--SKLHSISSIDVNGGN 591 (791)
T ss_dssp EEEEE-EC-SSSCEEEEEETTSCCEEEEECSS--C---SC---EEEEEEET---TTTEEEEEE--TTTTEEEEEETTSCS
T ss_pred CEEEe-cC-CCCCeEEEEecCCCceEEEEeCC--C---CC---ceEEEEec---CCCeEEEEe--CCCCcEEEEecCCCc
Confidence 6655 44 22368999999887776665321 1 11 12334432 567888874 445579999999887
Q ss_pred eEeeccC---CcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 390 LSLLDIP---FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 390 ~~~lt~~---~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
.+.+... ......+...++++|+.-.. ...|++++..+|+
T Consensus 592 ~~~v~~~~~~l~~P~glav~~~~lYwtD~~---~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 592 RKTILEDEKRLAHPFSLAVFEDKVFWTDII---NEAIFSANRLTGS 634 (791)
T ss_dssp CEEEEECTTTTSSEEEEEEETTEEEEEETT---TTEEEEEETTTCC
T ss_pred eEEEecCCCccCCCCEEEEeCCEEEEEECC---CCEEEEEeCCCCc
Confidence 7766543 12233455556666554432 2467888766654
No 417
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.44 E-value=2.3e-05 Score=78.97 Aligned_cols=243 Identities=12% Similarity=0.075 Sum_probs=127.1
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEE--CCEEEEEECC-CCc
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF--GDTVIFSNYK-DQR 166 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~-~~~ 166 (729)
.+.++.++|.+.+|+.+.. .++ |..++.. ++....+.......... .....++++ ++.+++.... ++.
T Consensus 31 ~p~~v~~~~~g~l~v~~~~---~~~--i~~~d~~--g~~~~~~~~~~~~~~~~--~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTN---NHR--IQIFDKE--GRFKFQFGECGKRDSQL--LYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp CEEEEEECTTCCEEEEEGG---GTE--EEEECTT--SCEEEEECCBSSSTTCB--SSEEEEEEETTTTEEEEEECGGGCE
T ss_pred CCceEEECCCCCEEEEECC---CCE--EEEECCC--CcEEEEecccCCCcccc--cCceEEEEEcCCCeEEEEcCCCCCE
Confidence 4667888885567776542 233 5555544 23222221110000000 112234442 4466666543 568
Q ss_pred EEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee--CCCeee
Q 004816 167 LYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS--GSDFYA 244 (729)
Q Consensus 167 l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~--~~~~~~ 244 (729)
|++++.++ ...+.+.... .......+++|||+ |+++ +.. ...|++++.++...+.+.. ......
T Consensus 102 i~~~d~~g--~~~~~~~~~~---~~~~~~i~~~~~g~-l~v~-~~~-------~~~i~~~~~~g~~~~~~~~~~~~~~p~ 167 (286)
T 1q7f_A 102 IQIYNQYG--QFVRKFGATI---LQHPRGVTVDNKGR-IIVV-ECK-------VMRVIIFDQNGNVLHKFGCSKHLEFPN 167 (286)
T ss_dssp EEEECTTS--CEEEEECTTT---CSCEEEEEECTTSC-EEEE-ETT-------TTEEEEECTTSCEEEEEECTTTCSSEE
T ss_pred EEEECCCC--cEEEEecCcc---CCCceEEEEeCCCC-EEEE-ECC-------CCEEEEEcCCCCEEEEeCCCCccCCcE
Confidence 99999654 4344443221 13346788999998 3333 322 2579999987554444432 223456
Q ss_pred eeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEE
Q 004816 245 FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNL 324 (729)
Q Consensus 245 ~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l 324 (729)
+.+++|||+ |++... ....|++++.+ ++. ...+...... ..+..+++++||++++.... +...|
T Consensus 168 ~i~~~~~g~-l~v~~~-------~~~~i~~~~~~--g~~--~~~~~~~g~~--~~p~~i~~d~~G~l~v~~~~--~~~~i 231 (286)
T 1q7f_A 168 GVVVNDKQE-IFISDN-------RAHCVKVFNYE--GQY--LRQIGGEGIT--NYPIGVGINSNGEILIADNH--NNFNL 231 (286)
T ss_dssp EEEECSSSE-EEEEEG-------GGTEEEEEETT--CCE--EEEESCTTTS--CSEEEEEECTTCCEEEEECS--SSCEE
T ss_pred EEEECCCCC-EEEEEC-------CCCEEEEEcCC--CCE--EEEEccCCcc--CCCcEEEECCCCCEEEEeCC--CCEEE
Confidence 789999997 655542 23469999875 443 2223221100 23456789999986655433 22378
Q ss_pred EEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEE
Q 004816 325 HKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 383 (729)
Q Consensus 325 ~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~ 383 (729)
.++++++...+.+.... ... ....+.+. .++.+|++ +.++...+|.+
T Consensus 232 ~~~~~~g~~~~~~~~~~-~~~------~~~~i~~~----~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 232 TIFTQDGQLISALESKV-KHA------QCFDVALM----DDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp EEECTTSCEEEEEEESS-CCS------CEEEEEEE----TTTEEEEE-ETTTEEEEEEC
T ss_pred EEECCCCCEEEEEcccC-CCC------cceeEEEC----CCCcEEEE-CCCCeEEEEEc
Confidence 88897665555554221 000 11234444 34467666 45665555543
No 418
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.44 E-value=2.7e-05 Score=81.96 Aligned_cols=156 Identities=9% Similarity=-0.032 Sum_probs=82.9
Q ss_pred EECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCC--C---CC-ceeeecceecCCCCEEEEEEeccCCCCCCcceEEEE
Q 004816 152 IFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDY--G---EP-LVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (729)
Q Consensus 152 ~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~--~---~~-~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~ 225 (729)
.+.+.++.....+++||++|+.+...+++.+.... + .. ..+.....++||| |+........ ......|.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~--g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEE--GEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETT--SCSCCEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcC--CCCCCeEEE
Confidence 45667777777778999999874102232221110 0 00 0122345689999 3333222211 122478999
Q ss_pred EEcCCCceEE-eeeC--C-CeeeeeeeCCCCCeEEEEEecC-----CCC-C-----CCCcEEEEEEecCCCCeeeeEEec
Q 004816 226 IALNGQNIQV-LVSG--S-DFYAFPRMDPRGERMAWIEWHH-----PNM-P-----WDKAELWVGYISENGDVYKRVCVA 290 (729)
Q Consensus 226 ~dl~~g~~~~-lt~~--~-~~~~~~~~SPDG~~la~~~~~~-----~~~-~-----~~~~~l~~~d~~~~g~~~~~~~~~ 290 (729)
+|.++.++.. +..+ . .+....+|+||++.++...|.. .+. + ....+|.++|++ +++... ++..
T Consensus 169 lD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~-~~k~~~-tI~v 246 (462)
T 2ece_A 169 LDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLR-KRKRIH-SLTL 246 (462)
T ss_dssp ECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETT-TTEEEE-EEES
T ss_pred EECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECC-CCcEee-EEec
Confidence 9999988654 3322 2 2233578999999665443321 110 0 125789999998 665432 2222
Q ss_pred CCCCCccccccCc--eeCCCCcEEEEEe
Q 004816 291 GFDPTIVESPTEP--KWSSKGELFFVTD 316 (729)
Q Consensus 291 ~~~~~~~~~~~~~--~wspDG~l~~~~~ 316 (729)
+.. + .....+ .++|||+.+|+..
T Consensus 247 g~~-g--~~P~~i~f~~~Pdg~~aYV~~ 271 (462)
T 2ece_A 247 GEE-N--RMALELRPLHDPTKLMGFINM 271 (462)
T ss_dssp CTT-E--EEEEEEEECSSTTCCEEEEEE
T ss_pred CCC-C--CccceeEeeECCCCCEEEEEE
Confidence 211 1 222333 4599999444433
No 419
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.42 E-value=6.3e-06 Score=87.25 Aligned_cols=228 Identities=12% Similarity=0.038 Sum_probs=125.1
Q ss_pred EEEEEECCCCcEEEEeCCCCCCC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc--
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN-- 232 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~-- 232 (729)
..+++...++.|.+||+.+ ++ ...+... ...+...+|+|||+.|+....+ ..+.++++.++.
T Consensus 79 ~~l~s~s~D~~v~iWd~~~--~~~~~~~~~h----~~~v~~~~~s~~g~~las~~~d---------~~v~iw~~~~~~~~ 143 (380)
T 3iz6_a 79 NWIVSASQDGRLIVWNALT--SQKTHAIKLH----CPWVMECAFAPNGQSVACGGLD---------SACSIFNLSSQADR 143 (380)
T ss_dssp SCEEEEETTSEEEEEETTT--TEEEEEEECC----CTTCCCCEECTTSSEEEECCSS---------SCCEEEECCCCSSC
T ss_pred CEEEEEeCCCeEEEEECCC--CccceEEecC----CCCEEEEEECCCCCEEEEeeCC---------CcEEEEECCCCccc
Confidence 4556666788999999987 43 2333333 2335778899999987765443 245666765432
Q ss_pred ------eEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEe-----cCCCCCcccccc
Q 004816 233 ------IQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV-----AGFDPTIVESPT 301 (729)
Q Consensus 233 ------~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~-----~~~~~~~~~~~~ 301 (729)
.+.+....+......|+|++...+++... ...|.++|+. +++. ...+ .+.. ..+.
T Consensus 144 ~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~-------D~~i~~wd~~-~~~~--~~~~~~~~~~~h~----~~v~ 209 (380)
T 3iz6_a 144 DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG-------DQTCVLWDVT-TGQR--ISIFGSEFPSGHT----ADVL 209 (380)
T ss_dssp CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT-------TSCEEEECTT-TCCE--EEEECCCSSSSCC----SCEE
T ss_pred cCCccceeeccCCCcceEEEEEecCCCCEEEEECC-------CCcEEEEEcC-CCcE--EEEeecccCCCCc----cCeE
Confidence 12233334455667899986543334422 2348889988 6654 3333 1222 3445
Q ss_pred CceeCC-CCcEEEEEecCCCceEEEEEEcCC-Ce-EEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeE
Q 004816 302 EPKWSS-KGELFFVTDRKNGFWNLHKWIESN-NE-VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS 378 (729)
Q Consensus 302 ~~~wsp-DG~l~~~~~~~~g~~~l~~~d~~~-g~-~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~ 378 (729)
.+.|++ |+.+++.... .+. |.++|+.. ++ .+.+......+.. +.|.| +++ .+++...+|..
T Consensus 210 ~~~~~~~~~~~l~sgs~-D~~--v~~wd~~~~~~~~~~~~~h~~~v~~---------v~~~p---~~~-~l~s~s~D~~i 273 (380)
T 3iz6_a 210 SLSINSLNANMFISGSC-DTT--VRLWDLRITSRAVRTYHGHEGDINS---------VKFFP---DGQ-RFGTGSDDGTC 273 (380)
T ss_dssp EEEECSSSCCEEEEEET-TSC--EEEEETTTTCCCCEEECCCSSCCCE---------EEECT---TSS-EEEEECSSSCE
T ss_pred EEEeecCCCCEEEEEEC-CCe--EEEEECCCCCcceEEECCcCCCeEE---------EEEec---CCC-eEEEEcCCCeE
Confidence 567866 6666555554 454 45557653 22 3333333333333 34432 444 45566677776
Q ss_pred EEEEEECCCCceEee-ccCC-------cceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 379 YLGILDDFGHSLSLL-DIPF-------TDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 379 ~ly~~d~~~g~~~~l-t~~~-------~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+|| |+.+++.... .... ..+..+ ...++.+++.++.. ..++++|...++.
T Consensus 274 ~lw--d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d---g~i~vwd~~~~~~ 332 (380)
T 3iz6_a 274 RLF--DMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN---GDCYVWDTLLAEM 332 (380)
T ss_dssp EEE--ETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT---SCEEEEETTTCCE
T ss_pred EEE--ECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC---CCEEEEECCCCce
Confidence 666 6666654332 2211 124444 34455555555432 4688888776653
No 420
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.42 E-value=3.4e-05 Score=83.04 Aligned_cols=256 Identities=8% Similarity=-0.021 Sum_probs=138.4
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCc
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQR 166 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~ 166 (729)
..+..+.|+| .+.++.+.. .++...+|.......+..... ....-+...+.+..++++ ..+++...++.
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s---~dg~v~vwd~~~~~~~~~~~~------~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGS---DQGVIKIWNLKEIIVGEVYSS------SLTYDCSSTVTQITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEE---TTSEEEEEEHHHHHTTCCCSC------SEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CceEEEEECCCCCCEEEEec---CCceEEEeECcccccCcccce------eeeccCCCCEEEEEEeCCCCEEEEEeCCCE
Confidence 4567889998 666666654 467778887643100110000 000012223344555543 45566667888
Q ss_pred EEEEeCC---CCCCCCeecCCC---------C--CCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc
Q 004816 167 LYKHSID---SKDSSPLPITPD---------Y--GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (729)
Q Consensus 167 l~~~d~~---~~~~~~~~lt~~---------~--~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~ 232 (729)
|.+|++. . ++....... + ...........++|||+.|+....+ ..|.++|+.+++
T Consensus 135 i~vwd~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~ 203 (437)
T 3gre_A 135 IIVLKVNHYQQ--ESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL---------SRVIIFDIRTLE 203 (437)
T ss_dssp EEEEEEEEEEE--TTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT---------SEEEEEETTTCC
T ss_pred EEEEEeccccC--CceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC---------CeEEEEeCCCCe
Confidence 9898884 3 322221110 0 0000111112267888877666543 479999999887
Q ss_pred eEEeeeC---CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEec-CCCCCccccccCc----e
Q 004816 233 IQVLVSG---SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA-GFDPTIVESPTEP----K 304 (729)
Q Consensus 233 ~~~lt~~---~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~-~~~~~~~~~~~~~----~ 304 (729)
......+ .......+|+|||++|+..+. ...|.++|+. .++. ...+. ... ..+..+ .
T Consensus 204 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~--------dg~i~iwd~~-~~~~--~~~~~~~~~----~~v~~~~~~~~ 268 (437)
T 3gre_A 204 RLQIIENSPRHGAVSSICIDEECCVLILGTT--------RGIIDIWDIR-FNVL--IRSWSFGDH----APITHVEVCQF 268 (437)
T ss_dssp EEEEEECCGGGCCEEEEEECTTSCEEEEEET--------TSCEEEEETT-TTEE--EEEEBCTTC----EEEEEEEECTT
T ss_pred eeEEEccCCCCCceEEEEECCCCCEEEEEcC--------CCeEEEEEcC-CccE--EEEEecCCC----CceEEEEeccc
Confidence 6544433 356778899999998886662 2349999988 5553 33332 332 344455 5
Q ss_pred eCCCCcEEEEEecCCCceEEEEEEcCCCeEEEee-ccCccccCCccccc-----------------CcceeeeeecCCCC
Q 004816 305 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFG-----------------INSYEIIQSHGEKN 366 (729)
Q Consensus 305 wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~-----------------~~~~~~l~~~~~~~ 366 (729)
|++||++++.... . ..|.++|+.+++..... ..........|.+. ...+.|. + +
T Consensus 269 ~s~~~~~l~s~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~----~-~ 340 (437)
T 3gre_A 269 YGKNSVIVVGGSS-K--TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS----N-D 340 (437)
T ss_dssp TCTTEEEEEEEST-T--EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE----T-T
T ss_pred cCCCccEEEEEcC-C--CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC----C-c
Confidence 6677775555443 2 46777888877654433 22222222223221 2334453 3 3
Q ss_pred EEEEEEEECCeEEEEEEECCCCc
Q 004816 367 LIACSYRQNGRSYLGILDDFGHS 389 (729)
Q Consensus 367 ~l~~~s~~~g~~~ly~~d~~~g~ 389 (729)
.++++...++...+ +|+.+++
T Consensus 341 ~~l~s~~~d~~i~~--wd~~~~~ 361 (437)
T 3gre_A 341 KILLTDEATSSIVM--FSLNELS 361 (437)
T ss_dssp EEEEEEGGGTEEEE--EETTCGG
T ss_pred eEEEecCCCCeEEE--EECCCcc
Confidence 56666666775554 4766665
No 421
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.41 E-value=1.3e-05 Score=83.89 Aligned_cols=94 Identities=16% Similarity=0.159 Sum_probs=60.8
Q ss_pred eEEEEEEcCCCc-----------------eEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcE-EEEEEecCCCC
Q 004816 221 TEIVAIALNGQN-----------------IQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAE-LWVGYISENGD 282 (729)
Q Consensus 221 ~~l~~~dl~~g~-----------------~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~-l~~~d~~~~g~ 282 (729)
..|.++|+.+++ .+.+..........+|||||++|+-.+. ... |.++|+. +++
T Consensus 159 g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~--------d~~~v~iwd~~-~~~ 229 (355)
T 3vu4_A 159 GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQ--------DGTIIRVFKTE-DGV 229 (355)
T ss_dssp TCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEET--------TCSEEEEEETT-TCC
T ss_pred cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeC--------CCCEEEEEECC-CCc
Confidence 458888888765 3445444556778899999999886662 234 8889998 676
Q ss_pred eeeeEEec-C-CCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCC
Q 004816 283 VYKRVCVA-G-FDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNN 332 (729)
Q Consensus 283 ~~~~~~~~-~-~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g 332 (729)
. ...+. + .. ..+..++|+|||++++.... .+. |.++|+..+
T Consensus 230 ~--~~~~~~g~h~----~~v~~~~~s~~~~~l~s~s~-d~~--v~iw~~~~~ 272 (355)
T 3vu4_A 230 L--VREFRRGLDR----ADVVDMKWSTDGSKLAVVSD-KWT--LHVFEIFND 272 (355)
T ss_dssp E--EEEEECTTCC----SCEEEEEECTTSCEEEEEET-TCE--EEEEESSCC
T ss_pred E--EEEEEcCCCC----CcEEEEEECCCCCEEEEEEC-CCE--EEEEEccCC
Confidence 4 33444 3 44 56678899999995444444 354 444555443
No 422
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.40 E-value=7.2e-05 Score=75.14 Aligned_cols=232 Identities=9% Similarity=0.025 Sum_probs=124.0
Q ss_pred CCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce
Q 004816 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (729)
Q Consensus 154 ~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~ 233 (729)
++.+++....++.|+++|.++| ....++.... .....+..++|||+.++ ..+ ..|+.+|.++...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG-~~~w~~~~~~---~~~~~~~~~~pdG~ilv--s~~---------~~V~~~d~~G~~~ 68 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK-EIVWEYPLEK---GWECNSVAATKAGEILF--SYS---------KGAKMITRDGREL 68 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT-EEEEEEECCT---TCCCCEEEECTTSCEEE--ECB---------SEEEEECTTSCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCC-eEEEEeCCCc---cCCCcCeEECCCCCEEE--eCC---------CCEEEECCCCCEE
Confidence 4567777777889999998662 3334444321 12346778999999655 221 4699999954444
Q ss_pred EEeeeCC-CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEE
Q 004816 234 QVLVSGS-DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELF 312 (729)
Q Consensus 234 ~~lt~~~-~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~ 312 (729)
.++..+. .......++|||+.|+-.. .. ...|+.++. +|+..+...+.............+..++||+++
T Consensus 69 W~~~~~~~~~~~~~~~~~dG~~lv~~~-~~------~~~v~~vd~--~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~l 139 (276)
T 3no2_A 69 WNIAAPAGCEMQTARILPDGNALVAWC-GH------PSTILEVNM--KGEVLSKTEFETGIERPHAQFRQINKNKKGNYL 139 (276)
T ss_dssp EEEECCTTCEEEEEEECTTSCEEEEEE-ST------TEEEEEECT--TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEE
T ss_pred EEEcCCCCccccccEECCCCCEEEEec-CC------CCEEEEEeC--CCCEEEEEeccCCCCcccccccCceECCCCCEE
Confidence 4554432 3455678999999765433 21 345777764 465433222221100000123345678999855
Q ss_pred EEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce-E
Q 004816 313 FVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-S 391 (729)
Q Consensus 313 ~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~-~ 391 (729)
+... +...|+.+|++ |+...-.... ...+ ...++ .++.+++....++ .|+.+|.++|++ .
T Consensus 140 v~~~---~~~~v~~~d~~-G~~~w~~~~~----~~~~-----~~~~~----~~g~~~v~~~~~~--~v~~~d~~tG~~~w 200 (276)
T 3no2_A 140 VPLF---ATSEVREIAPN-GQLLNSVKLS----GTPF-----SSAFL----DNGDCLVACGDAH--CFVQLNLESNRIVR 200 (276)
T ss_dssp EEET---TTTEEEEECTT-SCEEEEEECS----SCCC-----EEEEC----TTSCEEEECBTTS--EEEEECTTTCCEEE
T ss_pred EEec---CCCEEEEECCC-CCEEEEEECC----CCcc-----ceeEc----CCCCEEEEeCCCC--eEEEEeCcCCcEEE
Confidence 5443 23468899998 5543222211 1111 12233 3334444443333 599999996654 4
Q ss_pred eeccC------CcceEEe-eeeCCEEEEEEeCCC-------CCceEEEEEc
Q 004816 392 LLDIP------FTDIDNI-TLGNDCLFVEGASGV-------EPSSVAKVTL 428 (729)
Q Consensus 392 ~lt~~------~~~v~~~-~~~~~~~~~~~~~~~-------~~~~ly~~d~ 428 (729)
++... ...+..+ ..+++.+++...... ....++.++.
T Consensus 201 ~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~ 251 (276)
T 3no2_A 201 RVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS 251 (276)
T ss_dssp EEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT
T ss_pred EecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECC
Confidence 55422 1123333 344555555543211 2446777765
No 423
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.40 E-value=5.3e-06 Score=96.46 Aligned_cols=228 Identities=7% Similarity=-0.030 Sum_probs=129.6
Q ss_pred EEEEECCCCcEEEEeCCCCCCCCe---ecCCCCCCCceeeecceecCC--CCEEEEEEeccCCCCCCcceEEEEEEcCCC
Q 004816 157 VIFSNYKDQRLYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQ 231 (729)
Q Consensus 157 i~~~~~~~~~l~~~d~~~~~~~~~---~lt~~~~~~~~~~~~~~~SPd--G~~l~~~~~~~~~~~~~~~~~l~~~dl~~g 231 (729)
.+++...++.|.+|++.+ +..+ .+... ...+...+|+|+ |+.|+....+ ..|+++|+.++
T Consensus 23 ~latg~~dg~I~vwd~~~--~~~~~~~~l~~h----~~~V~~l~~s~~~~~~~l~s~s~D---------g~I~vwd~~~~ 87 (753)
T 3jro_A 23 RLATCSSDKTIKIFEVEG--ETHKLIDTLTGH----EGPVWRVDWAHPKFGTILASCSYD---------GKVLIWKEENG 87 (753)
T ss_dssp CEEEEETTTEEEEEEEET--TEEEEEEEECCC----SSCEEEEEECCTTSCSEEEEEETT---------SCEEEEEEETT
T ss_pred eEEEEECCCcEEEEecCC--CCCccceeccCC----cCceEEEEecCCCCCCEEEEEeCC---------CeEEEEECCCC
Confidence 344555678899999874 3222 23333 345778899998 8887766553 35888898887
Q ss_pred ceE---EeeeCCCeeeeeeeCCC--CCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeC
Q 004816 232 NIQ---VLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 306 (729)
Q Consensus 232 ~~~---~lt~~~~~~~~~~~SPD--G~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ws 306 (729)
+.. .+..........+|+|| |+.|+..+ ....|.++|+. ++.........+.. ..+..+.|+
T Consensus 88 ~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs--------~dg~I~vwdl~-~~~~~~~~~~~~~~----~~v~~l~~~ 154 (753)
T 3jro_A 88 RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS--------SDGKVSVVEFK-ENGTTSPIIIDAHA----IGVNSASWA 154 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--------TTSEEEEEECC-SSSCCCCEEEECCS----SCEEEEEEC
T ss_pred cccccccccCCCCCeEEEEECCCCCCCEEEEEe--------CCCcEEEEEee-cCCCcceeEeecCC----CceEEEEec
Confidence 533 23334456778899999 99888766 23469999998 55322233444444 566778899
Q ss_pred C-------------CCcEEEEEecCCCceEEEEEEcCCCe--EEEe---eccCccccCCcccccCcceeeeeecCCC--C
Q 004816 307 S-------------KGELFFVTDRKNGFWNLHKWIESNNE--VLAI---YSLDAEFSRPLWVFGINSYEIIQSHGEK--N 366 (729)
Q Consensus 307 p-------------DG~l~~~~~~~~g~~~l~~~d~~~g~--~~~l---~~~~~~~~~~~w~~~~~~~~~l~~~~~~--~ 366 (729)
| ||+++++... .|.-.+| |..++. ...+ ......+....|.+ ++ +
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~-dg~I~iw--d~~~~~~~~~~~~~~~~h~~~V~~l~~sp------------~~~~~ 219 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGA-DNLVKIW--KYNSDAQTYVLESTLEGHSDWVRDVAWSP------------TVLLR 219 (753)
T ss_dssp CCC---------CGGGCCEEEEET-TSCEEEE--EEETTTTEEEEEEEECCCSSCEEEEEECC------------CCSSS
T ss_pred CcccccccccccCCCCCEEEEEEC-CCeEEEE--eccCCcccceeeeeecCCCCcEEEEEecc------------CCCCC
Confidence 9 5774444444 4554444 554442 1222 12222232333332 42 5
Q ss_pred EEEEEEEECCeEEEEEEECCCCceE-eec---cCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCC
Q 004816 367 LIACSYRQNGRSYLGILDDFGHSLS-LLD---IPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDD 430 (729)
Q Consensus 367 ~l~~~s~~~g~~~ly~~d~~~g~~~-~lt---~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~ 430 (729)
.++++...+|...+|-+....+... .+. .....+..+ ..+++.+++.++.. ..++.+++..
T Consensus 220 ~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D---g~I~vwd~~~ 285 (753)
T 3jro_A 220 SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD---NKVTLWKENL 285 (753)
T ss_dssp EEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS---SCEECCBCCS
T ss_pred CEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC---CEEEEEecCC
Confidence 6777777888877776543221111 111 123345555 34455555555432 3466666653
No 424
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.39 E-value=7.8e-07 Score=95.09 Aligned_cols=111 Identities=9% Similarity=-0.105 Sum_probs=72.7
Q ss_pred CCEEEEEcCCCCCCcccc-chhhhHHHhh-CCcEEEEecCCCCCCCchhHHHhh---ccCCC----cccHHHHHHHHHHH
Q 004816 492 PPLLVKSHGGPTSEARGI-LNLSIQYWTS-RGWAFVDVNYGGSTGYGREFRERL---LGRWG----IVDVNDCCSCATFL 562 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~-~~~~~~~la~-~G~~v~~~d~rGs~g~g~~~~~~~---~~~~~----~~~~~D~~~~~~~l 562 (729)
.| ||++|||++...... .......+++ .|+.|+++|+||.|.+... .... ..+++ ...++|+...++++
T Consensus 39 ~P-i~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~-~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l 116 (446)
T 3n2z_B 39 GS-ILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPF-GDNSFKDSRHLNFLTSEQALADFAELIKHL 116 (446)
T ss_dssp CE-EEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTT-GGGGGSCTTTSTTCSHHHHHHHHHHHHHHH
T ss_pred CC-EEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCC-CccccccchhhccCCHHHHHHHHHHHHHHH
Confidence 46 566688865432110 1123334444 4899999999976554211 1111 01122 12478899999988
Q ss_pred HhCC-CCCCCcEEEEEcChHHHHHHHHHh-CCCcceEEEEeccc
Q 004816 563 VGSG-KADEKRLCITGGSAGGYTTLAALA-FRDTFKAGASLYGV 604 (729)
Q Consensus 563 ~~~~-~~d~~ri~i~G~S~GG~~a~~~~~-~~~~~~a~v~~~~~ 604 (729)
..+. .....++.++||||||.+|++++. +|+++.++|+.++.
T Consensus 117 ~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssap 160 (446)
T 3n2z_B 117 KRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAP 160 (446)
T ss_dssp HHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCC
T ss_pred HHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccc
Confidence 7752 223468999999999999999998 99999999987753
No 425
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.39 E-value=1.5e-05 Score=83.37 Aligned_cols=154 Identities=15% Similarity=0.106 Sum_probs=96.1
Q ss_pred EEECCEEEEE-ECCCCcEEEEeCCCCCCC-----------------CeecCCCCCCCceeeecceecCCCCEEEEEEecc
Q 004816 151 RIFGDTVIFS-NYKDQRLYKHSIDSKDSS-----------------PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDR 212 (729)
Q Consensus 151 ~~~~~~i~~~-~~~~~~l~~~d~~~~~~~-----------------~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~ 212 (729)
.++...+++. ...++.|.+||+.+ +. ...+... ...+...+|||||+.|+....+
T Consensus 144 ~~s~~~la~~sg~~~g~v~iwd~~~--~~~~~~~~~~~~~~~~~p~~~~~~~h----~~~v~~~~~s~~g~~l~s~s~d- 216 (355)
T 3vu4_A 144 EFSNGLLVYSNEFNLGQIHITKLQS--SGSATTQDQGVQQKAILGKGVLIKAH----TNPIKMVRLNRKSDMVATCSQD- 216 (355)
T ss_dssp EEETTEEEEEESSCTTCEEEEECCC--------------------CCEEECCC----SSCEEEEEECTTSSEEEEEETT-
T ss_pred EEEccEEEEeCCCcCcEEEEEECCC--CCccccccccccccccCcccEEEEcc----CCceEEEEECCCCCEEEEEeCC-
Confidence 3344667776 45678999999986 43 3444443 3557888999999987766543
Q ss_pred CCCCCCcceE-EEEEEcCCCceEEeee---CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEE
Q 004816 213 RQDALNSTTE-IVAIALNGQNIQVLVS---GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC 288 (729)
Q Consensus 213 ~~~~~~~~~~-l~~~dl~~g~~~~lt~---~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~ 288 (729)
.. |.++|+.+++...... ........+|||||++|+..+. ...|.++|+. .+.......
T Consensus 217 --------~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~--------d~~v~iw~~~-~~~~~~~~~ 279 (355)
T 3vu4_A 217 --------GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSD--------KWTLHVFEIF-NDQDNKRHA 279 (355)
T ss_dssp --------CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEET--------TCEEEEEESS-CCSCCCSEE
T ss_pred --------CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEEC--------CCEEEEEEcc-CCCCccccc
Confidence 34 8889999887654333 3456778899999999987762 3458888987 443222222
Q ss_pred ecC------CCCCcc-----------ccccCceeCCCCcEEEEEecCCCceEEEEEEc
Q 004816 289 VAG------FDPTIV-----------ESPTEPKWSSKGELFFVTDRKNGFWNLHKWIE 329 (729)
Q Consensus 289 ~~~------~~~~~~-----------~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~ 329 (729)
+.. ....|. .....++|++||+.++.... .|...+|.+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~-dg~~~~~~~~~ 336 (355)
T 3vu4_A 280 LKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPH-TRMIETFKVVF 336 (355)
T ss_dssp TTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETT-TTEEEEEEEEE
T ss_pred ccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeC-CCeEEEEEEEc
Confidence 111 000000 11134689999984444444 57777776554
No 426
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.39 E-value=1.9e-05 Score=82.55 Aligned_cols=134 Identities=8% Similarity=-0.082 Sum_probs=81.1
Q ss_pred eecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE-EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCC--CCcEEE
Q 004816 197 IFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPW--DKAELW 273 (729)
Q Consensus 197 ~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~-~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~--~~~~l~ 273 (729)
...|||++++......... ...|+++|.+++++. .+..+... +..+||||++||......+...+ ....|.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~----~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAA----VTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCCCCTTEEEEEECGGGCS----SEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCC----CCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 4579999865444321111 258999999998764 44434443 48999999999877631110000 124599
Q ss_pred EEEecCCCCeeeeEEecCCCC-CccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEee
Q 004816 274 VGYISENGDVYKRVCVAGFDP-TIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 338 (729)
Q Consensus 274 ~~d~~~~g~~~~~~~~~~~~~-~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~ 338 (729)
++|.. +++......+..... .-......+.++|||+.+|+++. .....+.++|.++++...-.
T Consensus 113 viD~~-t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~-~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 113 VFDPV-TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF-SPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp EECTT-TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC-SSSCEEEEEETTTTEEEEEE
T ss_pred EEECC-CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEc-CCCCeEEEEECCCCcEEEEE
Confidence 99988 676533322322000 00024467899999996566654 33467999999998765433
No 427
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.38 E-value=2.6e-05 Score=81.24 Aligned_cols=115 Identities=6% Similarity=-0.093 Sum_probs=81.2
Q ss_pred CceEEEECC----EEEEEECCCCcEEEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcce
Q 004816 147 GGAFRIFGD----TVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTT 221 (729)
Q Consensus 147 ~~~~~~~~~----~i~~~~~~~~~l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~ 221 (729)
+.+..++++ ..+++...++.|.+|++.+.+... ..+... ...+...+|+|||+.|+....+ .
T Consensus 42 v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~d---------g 108 (368)
T 3mmy_A 42 IGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH----TGPVLDVCWSDDGSKVFTASCD---------K 108 (368)
T ss_dssp EEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC----SSCEEEEEECTTSSEEEEEETT---------S
T ss_pred eEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc----cCCEEEEEECcCCCEEEEEcCC---------C
Confidence 344555543 677777778899999987510222 233333 3456788999999988766543 4
Q ss_pred EEEEEEcCCCceEEeeeCCCeeeeeee--CCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe
Q 004816 222 EIVAIALNGQNIQVLVSGSDFYAFPRM--DPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV 283 (729)
Q Consensus 222 ~l~~~dl~~g~~~~lt~~~~~~~~~~~--SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~ 283 (729)
.|.++|+.+++...+...........| +|||+.|+..+ ....|.++|+. +++.
T Consensus 109 ~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--------~dg~i~vwd~~-~~~~ 163 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGS--------WDKTLKFWDTR-SSNP 163 (368)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEE--------TTSEEEEECSS-CSSC
T ss_pred cEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEcc--------CCCcEEEEECC-CCcE
Confidence 699999999888777666667778899 99999887666 23459999988 5654
No 428
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.38 E-value=2.1e-05 Score=81.03 Aligned_cols=227 Identities=9% Similarity=0.014 Sum_probs=123.0
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccC-CCCCcc---------ccccc-ccCCceEEEE--CC
Q 004816 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDIT-PKEYAV---------RTTAQ-EYGGGAFRIF--GD 155 (729)
Q Consensus 89 ~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~-~~~~~~---------~~~~~-~~~~~~~~~~--~~ 155 (729)
..++++.|++.+.++|++. ..++ |++++..+ +..+.+. +..+.. ..... ......+.++ ++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~---~~~~--i~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g 92 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSV---QDGR--VIKYEGPN-SGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN 92 (322)
T ss_dssp SCCCCEECCTTCSSEEEEC---TTSE--EEEECCTT-TCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred CCceEEEEcCCCCEEEEEc---CCCe--EEEECCCC-CceEEEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence 4678999998666777765 2343 66666552 2222221 111000 00000 0011224455 34
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCC-CceeeecceecC-CCCEEEEEEeccCCCC---------CCcceEEE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGE-PLVSYADGIFDP-RFNRYVTVREDRRQDA---------LNSTTEIV 224 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~-~~~~~~~~~~SP-dG~~l~~~~~~~~~~~---------~~~~~~l~ 224 (729)
.|++... ...|++++.++ +..+.+...... ......+.+++| ||+ |++......... ......|+
T Consensus 93 ~l~v~d~-~~~i~~~d~~~--g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 93 QLYIVDC-YYHLSVVGSEG--GHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp EEEEEET-TTEEEEECTTC--EECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred cEEEEEC-CCCEEEEeCCC--CEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEE
Confidence 6665543 34599999886 655555432110 012347788999 997 344322110000 01136799
Q ss_pred EEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCce
Q 004816 225 AIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 304 (729)
Q Consensus 225 ~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 304 (729)
+++.++++.+.+..+.....+.+|+|||+.|++.... ...|++++++ ++.......+.... . ...+.
T Consensus 169 ~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~-------~~~I~~~~~~-~~~~~~~~~~~~~~----g-P~gi~ 235 (322)
T 2fp8_A 169 KYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFL-------SHQIVKYWLE-GPKKGTAEVLVKIP----N-PGNIK 235 (322)
T ss_dssp EEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG-------GTEEEEEESS-STTTTCEEEEEECS----S-EEEEE
T ss_pred EEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCC-------CCeEEEEECC-CCcCCccceEEeCC----C-CCCeE
Confidence 9999888777665544455678999999988877632 3469999987 43222222222222 2 45678
Q ss_pred eCCCCcEEEEEecC-------CCceEEEEEEcCCCeEEEee
Q 004816 305 WSSKGELFFVTDRK-------NGFWNLHKWIESNNEVLAIY 338 (729)
Q Consensus 305 wspDG~l~~~~~~~-------~g~~~l~~~d~~~g~~~~l~ 338 (729)
..+||+|++..... .....|+++|+++...+.+.
T Consensus 236 ~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~ 276 (322)
T 2fp8_A 236 RNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIP 276 (322)
T ss_dssp ECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEE
T ss_pred ECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEE
Confidence 89999855443220 01457999998755444444
No 429
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.38 E-value=7.7e-05 Score=83.98 Aligned_cols=230 Identities=14% Similarity=0.143 Sum_probs=143.8
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV 235 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~ 235 (729)
.|+|.. ...|.++++++ .....+....+ -.......|+++++.|+++... ...|++++++++..+.
T Consensus 8 ~Ll~s~--~~~I~~i~l~~--~~~~~~~~~~~--~~~~~~l~~d~~~~~lywtD~~--------~~~I~r~~~~g~~~~~ 73 (628)
T 4a0p_A 8 FLLFSR--RADIRRISLET--NNNNVAIPLTG--VKEASALDFDVTDNRIYWTDIS--------LKTISRAFMNGSALEH 73 (628)
T ss_dssp EEEEEE--TTEEEEEESSC--TTCEEECCCCS--CSCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEE
T ss_pred EEEEEe--CCcEEEEECCC--CCcceEEEcCC--CCceEEEEEECCCCEEEEEECC--------CCeEEEEECCCCCcEE
Confidence 466763 55799999987 54433322210 1234567899998887666432 2579999999876665
Q ss_pred eee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEE
Q 004816 236 LVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFF 313 (729)
Q Consensus 236 lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~ 313 (729)
+.. +.....+.+..+.++.|+|+.. ....|.+++++ +... ..+....- .....++..|... |||
T Consensus 74 v~~~g~~~P~GlAvD~~~~~LY~tD~-------~~~~I~v~~~d-G~~~--~~l~~~~l----~~P~~iavdp~~G~lY~ 139 (628)
T 4a0p_A 74 VVEFGLDYPEGMAVDWLGKNLYWADT-------GTNRIEVSKLD-GQHR--QVLVWKDL----DSPRALALDPAEGFMYW 139 (628)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEET-------TTTEEEEEETT-STTC--EEEECSSC----CCEEEEEEETTTTEEEE
T ss_pred EEeCCCCCcceEEEEeCCCEEEEEEC-------CCCEEEEEecC-CCcE--EEEEeCCC----CCcccEEEccCCCeEEE
Confidence 543 4344567788888999998863 23569999987 3322 23332221 3445677887544 655
Q ss_pred EEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEee
Q 004816 314 VTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 393 (729)
Q Consensus 314 ~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~l 393 (729)
+ +. .....|+++++++...+.+... ...| +.+.+.+ +++.|||+-. +...|++++++++..+.+
T Consensus 140 t-D~-g~~~~I~r~~~dG~~~~~l~~~---~~~P------~GlalD~---~~~~LY~aD~--~~~~I~~~d~dG~~~~v~ 203 (628)
T 4a0p_A 140 T-EW-GGKPKIDRAAMDGSERTTLVPN---VGRA------NGLTIDY---AKRRLYWTDL--DTNLIESSNMLGLNREVI 203 (628)
T ss_dssp E-EC-SSSCEEEEEETTSCSCEEEECS---CSSE------EEEEEET---TTTEEEEEET--TTTEEEEEETTSCSCEEE
T ss_pred e-CC-CCCCEEEEEeCCCCceEEEECC---CCCc------ceEEEcc---ccCEEEEEEC--CCCEEEEEcCCCCceEEe
Confidence 4 54 2356899999988777766531 1111 2344432 5788988764 445789999988776655
Q ss_pred ccCCcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 394 DIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 394 t~~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
.........+..+++.+++.-. ....|+++|..+|+
T Consensus 204 ~~~l~~P~glav~~~~ly~tD~---~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 204 ADDLPHPFGLTQYQDYIYWTDW---SRRSIERANKTSGQ 239 (628)
T ss_dssp EECCSCEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred eccCCCceEEEEECCEEEEecC---CCCEEEEEECCCCC
Confidence 4444444455555676665542 23478999876664
No 430
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.38 E-value=4.1e-05 Score=81.08 Aligned_cols=240 Identities=8% Similarity=-0.036 Sum_probs=132.6
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEE----CCEEEEEECC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF----GDTVIFSNYK 163 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~ 163 (729)
..+..+.|+| ++.++.+.. .++...+|..... +....+..... .....+. +..+++....
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~---~d~~i~iwd~~~~---~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 164 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSS---FDKTLKVWDTNTL---QTADVFNFEET---------VYSHHMSPVSTKHCLVAVGTR 164 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEE---TTSEEEEEETTTT---EEEEEEECSSC---------EEEEEECSSCSSCCEEEEEES
T ss_pred CcEEEEEEccCCCcEEEEEe---CCCeEEEeeCCCC---ccceeccCCCc---------eeeeEeecCCCCCcEEEEEcC
Confidence 3567889999 776666654 3567777765433 22222211100 1112222 2235666667
Q ss_pred CCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc--eEEe-----
Q 004816 164 DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN--IQVL----- 236 (729)
Q Consensus 164 ~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~--~~~l----- 236 (729)
++.|.+||+.++ .....+... ...+..++|+|+|++++++...+ ..|.++|+.++. ...+
T Consensus 165 ~~~v~~~d~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~ll~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~ 231 (408)
T 4a11_B 165 GPKVQLCDLKSG-SCSHILQGH----RQEILAVSWSPRYDYILATASAD--------SRVKLWDVRRASGCLITLDQHNG 231 (408)
T ss_dssp SSSEEEEESSSS-CCCEEECCC----CSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTCSSCCSEECCTTTT
T ss_pred CCeEEEEeCCCc-ceeeeecCC----CCcEEEEEECCCCCcEEEEEcCC--------CcEEEEECCCCCccccccccccc
Confidence 889999999872 334445443 34567889999999755554433 458888987653 2222
Q ss_pred ----------eeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeC
Q 004816 237 ----------VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 306 (729)
Q Consensus 237 ----------t~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ws 306 (729)
..........+|+|||++|+..+. ...|.++|+. +++... .................+.
T Consensus 232 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------dg~i~vwd~~-~~~~~~--~~~~~~~~~~~~~~~~~~~ 300 (408)
T 4a11_B 232 KKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT--------DNRMRLWNSS-NGENTL--VNYGKVCNNSKKGLKFTVS 300 (408)
T ss_dssp CSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET--------TSCEEEEETT-TCCBCC--CCCCCCCCCCSSCCCCEEC
T ss_pred ccceeeccccccccCceeEEEEcCCCCEEEEecC--------CCeEEEEECC-CCccce--eccccccccccccceeEEe
Confidence 112344567899999999987662 2349999998 555311 1111100000111222333
Q ss_pred CC-Cc-EEEEEecCCCceEEEEEEcCCCeEEEeec-cCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEE
Q 004816 307 SK-GE-LFFVTDRKNGFWNLHKWIESNNEVLAIYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 383 (729)
Q Consensus 307 pD-G~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~-~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~ 383 (729)
.+ +. +++.... ..|.++|..+++...... ....+.. +.|.+ +++ ++++...+|...+|.+
T Consensus 301 ~~~~~~~~~~~~~----~~i~v~d~~~~~~~~~~~~~~~~v~~---------~~~s~---~~~-~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 301 CGCSSEFVFVPYG----STIAVYTVYSGEQITMLKGHYKTVDC---------CVFQS---NFQ-ELYSGSRDCNILAWVP 363 (408)
T ss_dssp CSSSSCEEEEEET----TEEEEEETTTCCEEEEECCCSSCEEE---------EEEET---TTT-EEEEEETTSCEEEEEE
T ss_pred cCCCceEEEEecC----CEEEEEECcCCcceeeeccCCCeEEE---------EEEcC---CCC-EEEEECCCCeEEEEeC
Confidence 33 23 6655544 367778888876554442 2222333 34442 444 5556777887777755
Q ss_pred E
Q 004816 384 D 384 (729)
Q Consensus 384 d 384 (729)
+
T Consensus 364 ~ 364 (408)
T 4a11_B 364 S 364 (408)
T ss_dssp C
T ss_pred C
Confidence 3
No 431
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.38 E-value=9.7e-05 Score=80.14 Aligned_cols=232 Identities=12% Similarity=0.044 Sum_probs=132.5
Q ss_pred CceEEEECCEEEEEECCCCcEEEEeCCCCCCCC-eecCCCCCCCceeeecceec--CCCCEEEEEEeccCCCCCCcceEE
Q 004816 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFD--PRFNRYVTVREDRRQDALNSTTEI 223 (729)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~S--PdG~~l~~~~~~~~~~~~~~~~~l 223 (729)
..+..++++.++++...++.|.+||+.+ ++. ..+... ...+....|+ |+++.++....+ ..|
T Consensus 165 V~~l~~~~~~~l~s~s~dg~i~vwd~~~--~~~~~~~~~h----~~~v~~l~~~~~~~~~~l~s~s~d---------~~i 229 (464)
T 3v7d_B 165 VWALKYAHGGILVSGSTDRTVRVWDIKK--GCCTHVFEGH----NSTVRCLDIVEYKNIKYIVTGSRD---------NTL 229 (464)
T ss_dssp EEEEEECSTTEEEEEETTSCEEEEETTT--TEEEEEECCC----SSCEEEEEEEESSSCEEEEEEETT---------SCE
T ss_pred EEEEEEcCCCEEEEEeCCCCEEEEECCC--CcEEEEECCC----CCccEEEEEecCCCCCEEEEEcCC---------CcE
Confidence 3445555554667777888999999987 543 333322 2344555566 677776655543 357
Q ss_pred EEEEcCCCceEE-----------------------eeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCC
Q 004816 224 VAIALNGQNIQV-----------------------LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN 280 (729)
Q Consensus 224 ~~~dl~~g~~~~-----------------------lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~ 280 (729)
.++|+.+++... ...+. ...-.+++|+|+.|+..+. ...|.++|+. +
T Consensus 230 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~~--------d~~i~vwd~~-~ 299 (464)
T 3v7d_B 230 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH-MASVRTVSGHGNIVVSGSY--------DNTLIVWDVA-Q 299 (464)
T ss_dssp EEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC-SSCEEEEEEETTEEEEEET--------TSCEEEEETT-T
T ss_pred EEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc-cceEEEEcCCCCEEEEEeC--------CCeEEEEECC-C
Confidence 888887754221 11111 1112356899998876662 2349999988 6
Q ss_pred CCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeec-cCccccCCcccccCcceeee
Q 004816 281 GDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYS-LDAEFSRPLWVFGINSYEII 359 (729)
Q Consensus 281 g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~-~~~~~~~~~w~~~~~~~~~l 359 (729)
++. ...+.+.. ..+..+.|+|||+.+++... .+ .|.++|+.+++...... ....+ ..+.+
T Consensus 300 ~~~--~~~~~~~~----~~v~~~~~~~~~~~l~sg~~-dg--~i~vwd~~~~~~~~~~~~h~~~v---------~~~~~- 360 (464)
T 3v7d_B 300 MKC--LYILSGHT----DRIYSTIYDHERKRCISASM-DT--TIRIWDLENGELMYTLQGHTALV---------GLLRL- 360 (464)
T ss_dssp TEE--EEEECCCS----SCEEEEEEETTTTEEEEEET-TS--CEEEEETTTTEEEEEECCCSSCE---------EEEEE-
T ss_pred CcE--EEEecCCC----CCEEEEEEcCCCCEEEEEeC-CC--cEEEEECCCCcEEEEEeCCCCcE---------EEEEE-
Confidence 654 44555554 56678899999995545444 34 46677888876554332 21111 12233
Q ss_pred eecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 360 QSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 360 ~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+++ .+++...+|...+| |+.++...........+..+ ...++.+++.++ . ..+.++|+.+++.
T Consensus 361 ----~~~-~l~s~s~dg~v~vw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d---g~i~iwd~~~g~~ 424 (464)
T 3v7d_B 361 ----SDK-FLVSAAADGSIRGW--DANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-E---NQFNIYNLRSGKL 424 (464)
T ss_dssp ----CSS-EEEEEETTSEEEEE--ETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-T---TEEEEEETTTCCE
T ss_pred ----cCC-EEEEEeCCCcEEEE--ECCCCceeeeecCCCCccEEEEEeCCCEEEEec-C---CeEEEEECCCCcE
Confidence 333 55566667765555 66665543332222222222 333444555544 2 4788999988874
No 432
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.37 E-value=1.7e-05 Score=82.83 Aligned_cols=97 Identities=2% Similarity=-0.215 Sum_probs=57.8
Q ss_pred EEEEEECCCC----cEEEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEecc-CCCCCCcceEEEEEEcC
Q 004816 156 TVIFSNYKDQ----RLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDR-RQDALNSTTEIVAIALN 229 (729)
Q Consensus 156 ~i~~~~~~~~----~l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~-~~~~~~~~~~l~~~dl~ 229 (729)
+++..+...+ +++++|.++ ++. ..+..+ ... .+.+||||++++...... ..........|.++|+.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t--~~v~~~i~vG-----~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~ 104 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGC--GVTLGHSLGA-----FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV 104 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTT--TEEEEEEEEC-----TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT
T ss_pred eEEEECCccCCccceEEEEECCC--CeEEEEEeCC-----CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 4555555444 899999987 433 333322 112 588999999865553210 00000113679999999
Q ss_pred CCceE-EeeeC--C-----CeeeeeeeCCCCCeEEEEEe
Q 004816 230 GQNIQ-VLVSG--S-----DFYAFPRMDPRGERMAWIEW 260 (729)
Q Consensus 230 ~g~~~-~lt~~--~-----~~~~~~~~SPDG~~la~~~~ 260 (729)
++++. .+.-+ . ..-.+..+||||++|+....
T Consensus 105 T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~ 143 (368)
T 1mda_H 105 TFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLF 143 (368)
T ss_dssp TCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEEC
T ss_pred CCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEcc
Confidence 98764 34322 1 12346789999999877653
No 433
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.36 E-value=3.7e-05 Score=76.58 Aligned_cols=226 Identities=13% Similarity=0.052 Sum_probs=119.3
Q ss_pred EEEE-EECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE
Q 004816 156 TVIF-SNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (729)
Q Consensus 156 ~i~~-~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~ 234 (729)
.+++ .....+.|++++..+ +....+.... .......+++|||+ |++. ... ..|++++.+++..+
T Consensus 36 ~l~v~~~~~~~~i~~~~~~~--~~~~~~~~~~---~~~p~~i~~~~~g~-l~v~-~~~--------~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 36 NVYVTSEGMYGRVVKLATGS--TGTTVLPFNG---LYQPQGLAVDGAGT-VYVT-DFN--------NRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEECSSSCEEEEECC-------EECCCCS---CCSCCCEEECTTCC-EEEE-ETT--------TEEEEECTTCSCCE
T ss_pred CEEEEccCCCCcEEEecCCC--cccceEeeCC---cCCcceeEECCCCC-EEEE-cCC--------CEEEEEeCCCceEe
Confidence 5555 445567899999875 5444433221 12346778999998 4433 322 46999999877665
Q ss_pred Eeee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEE
Q 004816 235 VLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFF 313 (729)
Q Consensus 235 ~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~ 313 (729)
.+.. +.....+.+++|||+ |++.... ...|++++.. +... ........ ..+..+.+++||++++
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~-l~v~~~~-------~~~i~~~~~~-~~~~--~~~~~~~~----~~p~~i~~~~~g~l~v 165 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGA-VYVADRG-------NNRVVKLAAG-SKTQ--TVLPFTGL----NDPDGVAVDNSGNVYV 165 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCC-EEEEEGG-------GTEEEEECTT-CCSC--EECCCCSC----CSCCCEEECTTCCEEE
T ss_pred eeecCCcCCCcceEECCCCC-EEEEECC-------CCEEEEEECC-Ccee--EeeccccC----CCceeEEEeCCCCEEE
Confidence 5532 224456778999997 6555422 3458888643 2221 11111111 3456788999998555
Q ss_pred EEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEee
Q 004816 314 VTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 393 (729)
Q Consensus 314 ~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~l 393 (729)
... +...|++++++++......... .. ....+.+. .++.+|++...+ ..|++++.++.....+
T Consensus 166 ~~~---~~~~i~~~~~~~~~~~~~~~~~--~~------~p~~i~~d----~~g~l~v~~~~~--~~v~~~~~~~~~~~~~ 228 (270)
T 1rwi_B 166 TDT---DNNRVVKLEAESNNQVVLPFTD--IT------APWGIAVD----EAGTVYVTEHNT--NQVVKLLAGSTTSTVL 228 (270)
T ss_dssp EEG---GGTEEEEECTTTCCEEECCCSS--CC------SEEEEEEC----TTCCEEEEETTT--SCEEEECTTCSCCEEC
T ss_pred EEC---CCCEEEEEecCCCceEeecccC--CC------CceEEEEC----CCCCEEEEECCC--CcEEEEcCCCCcceee
Confidence 443 2357899998877654432111 11 11233443 334566654323 3577888877665444
Q ss_pred ccC-CcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCC
Q 004816 394 DIP-FTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDH 431 (729)
Q Consensus 394 t~~-~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~ 431 (729)
... ......+ ...++.+++.... ...|.++++...
T Consensus 229 ~~~~~~~p~~i~~~~~g~l~v~~~~---~~~v~~~~~~~~ 265 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSDRTVYVADRG---NDRVVKLTSLEH 265 (270)
T ss_dssp CCCSCSCEEEEEECTTCCEEEEEGG---GTEEEEECCCGG
T ss_pred ccCCCCCceeEEECCCCCEEEEECC---CCEEEEEcCCCc
Confidence 322 2334445 2333444333322 134555555443
No 434
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.36 E-value=0.00011 Score=74.62 Aligned_cols=272 Identities=9% Similarity=0.027 Sum_probs=145.8
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECC-EEEEEECCCCc
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQR 166 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~ 166 (729)
..+..+.| | ++.++- .. .+|...+|..... ........ +.....+..++++ ..+++...++.
T Consensus 19 ~~v~~~~~-~~~~~l~s-~~---~dg~v~vw~~~~~---~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~dg~ 82 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVAS-VS---RDGTVRLWSKDDQ---WLGTVVYT--------GQGFLNSVCYDSEKELLLFGGKDTM 82 (313)
T ss_dssp SCEEEEEE-EETTEEEE-EE---TTSEEEEEEESSS---EEEEEEEE--------CSSCEEEEEEETTTTEEEEEETTSC
T ss_pred CCcEEEEe-cCCCEEEE-EE---cCCcEEEEECCCC---EEEEEeec--------CCccEEEEEECCCCCEEEEecCCCe
Confidence 34567788 6 555443 32 4577777766332 22211111 1112233444432 34555556788
Q ss_pred EEEEeCCCCC-CC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeee
Q 004816 167 LYKHSIDSKD-SS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYA 244 (729)
Q Consensus 167 l~~~d~~~~~-~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~ 244 (729)
+.++++.... .+ ...+... ...+....| +++.++....+ ..|.++| .......+........
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~--~~~~l~~~~~d---------~~i~~~d-~~~~~~~~~~~~~~v~ 146 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGH----QGNVCSLSF--QDGVVISGSWD---------KTAKVWK-EGSLVYNLQAHNASVW 146 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCC----SSCEEEEEE--ETTEEEEEETT---------SEEEEEE-TTEEEEEEECCSSCEE
T ss_pred EEEEEeeecCCCCcccchhhc----ccCEEEEEe--cCCEEEEEeCC---------CCEEEEc-CCcEEEecccCCCcee
Confidence 9999986510 11 2223222 234455556 67776655543 4688888 2223334444455566
Q ss_pred eeeeCC-CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecC-CCCCccccccCceeCCCCcEEEEEecCCCce
Q 004816 245 FPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG-FDPTIVESPTEPKWSSKGELFFVTDRKNGFW 322 (729)
Q Consensus 245 ~~~~SP-DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~-~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~ 322 (729)
...|+| +++.|+.... ...|.++|.. + ....+.. .. ..+..+.|+|+++++ .... .+
T Consensus 147 ~~~~~~~~~~~l~~~~~--------d~~i~i~d~~---~--~~~~~~~~~~----~~i~~~~~~~~~~~~-~~~~-dg-- 205 (313)
T 3odt_A 147 DAKVVSFSENKFLTASA--------DKTIKLWQND---K--VIKTFSGIHN----DVVRHLAVVDDGHFI-SCSN-DG-- 205 (313)
T ss_dssp EEEEEETTTTEEEEEET--------TSCEEEEETT---E--EEEEECSSCS----SCEEEEEEEETTEEE-EEET-TS--
T ss_pred EEEEccCCCCEEEEEEC--------CCCEEEEecC---c--eEEEEeccCc----ccEEEEEEcCCCeEE-EccC-CC--
Confidence 778887 9998876652 2348888733 2 2333433 33 556778999999833 3333 33
Q ss_pred EEEEEEcCCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce-EeeccCCcce
Q 004816 323 NLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-SLLDIPFTDI 400 (729)
Q Consensus 323 ~l~~~d~~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~-~~lt~~~~~v 400 (729)
.|.++|..+++..... .....+.. +.|.+ ++ . +++...+|...+ +++.+++. ..+..+...+
T Consensus 206 ~i~i~d~~~~~~~~~~~~~~~~i~~---------~~~~~---~~-~-l~~~~~dg~v~i--wd~~~~~~~~~~~~~~~~i 269 (313)
T 3odt_A 206 LIKLVDMHTGDVLRTYEGHESFVYC---------IKLLP---NG-D-IVSCGEDRTVRI--WSKENGSLKQVITLPAISI 269 (313)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEE---------EEECT---TS-C-EEEEETTSEEEE--ECTTTCCEEEEEECSSSCE
T ss_pred eEEEEECCchhhhhhhhcCCceEEE---------EEEec---CC-C-EEEEecCCEEEE--EECCCCceeEEEeccCceE
Confidence 5777788877654433 22222222 33432 44 3 445556666544 47766664 3445555567
Q ss_pred EEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 401 DNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 401 ~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
..+ ..+++.++ .++. ...++.+++.+++.
T Consensus 270 ~~~~~~~~~~~~-~~~~---dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 270 WSVDCMSNGDII-VGSS---DNLVRIFSQEKSRW 299 (313)
T ss_dssp EEEEECTTSCEE-EEET---TSCEEEEESCGGGC
T ss_pred EEEEEccCCCEE-EEeC---CCcEEEEeCCCCce
Confidence 777 44444433 3333 24677778777654
No 435
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.35 E-value=2.3e-05 Score=80.55 Aligned_cols=228 Identities=9% Similarity=-0.003 Sum_probs=122.0
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCC---eecCCCCCCCceeeecceecC--CCCEEEEEEeccCCCCCCcceEEEEEEcCC
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDP--RFNRYVTVREDRRQDALNSTTEIVAIALNG 230 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~---~~lt~~~~~~~~~~~~~~~SP--dG~~l~~~~~~~~~~~~~~~~~l~~~dl~~ 230 (729)
..+++...++.|.+||+.+ +.. ..+... ...+...+|+| +|+.|+....+ ..|.++|+.+
T Consensus 26 ~~lasgs~D~~v~lwd~~~--~~~~~~~~l~gH----~~~V~~v~~~~~~~~~~l~s~s~D---------~~v~iWd~~~ 90 (316)
T 3bg1_A 26 TRLATCSSDRSVKIFDVRN--GGQILIADLRGH----EGPVWQVAWAHPMYGNILASCSYD---------RKVIIWREEN 90 (316)
T ss_dssp CEEEEEETTTEEEEEEEET--TEEEEEEEEECC----SSCEEEEEECCGGGSSCEEEEETT---------SCEEEECCSS
T ss_pred CEEEEEeCCCeEEEEEecC--CCcEEEEEEcCC----CccEEEEEeCCCCCCCEEEEEECC---------CEEEEEECCC
Confidence 3455666788899999876 432 233333 34567888987 48876655543 3588889887
Q ss_pred CceE---EeeeCCCeeeeeeeCCC--CCeEEEEEecCCCCCCCCcEEEEEEecCCCC-eeeeEEecCCCCCccccccCce
Q 004816 231 QNIQ---VLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGD-VYKRVCVAGFDPTIVESPTEPK 304 (729)
Q Consensus 231 g~~~---~lt~~~~~~~~~~~SPD--G~~la~~~~~~~~~~~~~~~l~~~d~~~~g~-~~~~~~~~~~~~~~~~~~~~~~ 304 (729)
++.. .+..........+|+|| |+.|+..+. ...|.++|+. ++. ........+.. ..+..+.
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~--------D~~i~lwd~~-~~~~~~~~~~~~~h~----~~v~~~~ 157 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSS--------DGAISLLTYT-GEGQWEVKKINNAHT----IGCNAVS 157 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECS--------SSCEEEEEEC-SSSCEEECCBTTSSS----SCBCCCE
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcC--------CCCEEEEecC-CCCCcceeeeecccc----CCcceEE
Confidence 6422 23233455677899998 777765542 2348888887 442 21122223333 4566788
Q ss_pred eCCCC-----------------cEEEEEecCCCceEEEEEEcCCC-eEEEee---ccCccccCCcccccCcceeeeeecC
Q 004816 305 WSSKG-----------------ELFFVTDRKNGFWNLHKWIESNN-EVLAIY---SLDAEFSRPLWVFGINSYEIIQSHG 363 (729)
Q Consensus 305 wspDG-----------------~l~~~~~~~~g~~~l~~~d~~~g-~~~~l~---~~~~~~~~~~w~~~~~~~~~l~~~~ 363 (729)
|+|++ +++..... .+.-.|| |..++ +.+.+. .....+....|.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~-D~~v~lW--d~~~~~~~~~~~~l~~h~~~V~~v~~sp------------ 222 (316)
T 3bg1_A 158 WAPAVVPGSLIDHPSGQKPNYIKRFASGGC-DNLIKLW--KEEEDGQWKEEQKLEAHSDWVRDVAWAP------------ 222 (316)
T ss_dssp ECCCCCC------CCSCCCCCCCBEECCBT-TSBCCEE--EECTTSCEEEEECCBCCSSCEEEEECCC------------
T ss_pred EccccCCccccccccccCccccceEEEecC-CCeEEEE--EeCCCCccceeeecccCCCceEEEEecC------------
Confidence 99983 33333333 3444555 44433 222222 2222222233333
Q ss_pred CC---CEEEEEEEECCeEEEEEEECCC-Cc--eEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEE
Q 004816 364 EK---NLIACSYRQNGRSYLGILDDFG-HS--LSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVT 427 (729)
Q Consensus 364 ~~---~~l~~~s~~~g~~~ly~~d~~~-g~--~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d 427 (729)
++ ..++++...++...||.++... +. .+.+......+..+ ..+++.+++.++. +..-.+|..+
T Consensus 223 ~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~-D~~v~lw~~~ 292 (316)
T 3bg1_A 223 SIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG-DNKVTLWKES 292 (316)
T ss_dssp CSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES-SSCEEEEEEC
T ss_pred CCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC-CCeEEEEEEC
Confidence 32 2566777788888887553211 11 22333334456666 4445555555543 3333445443
No 436
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.35 E-value=1.7e-05 Score=82.67 Aligned_cols=221 Identities=9% Similarity=-0.044 Sum_probs=121.4
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCC-CcccccccccCCceEEEEC-CEEEEEECC---
Q 004816 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKE-YAVRTTAQEYGGGAFRIFG-DTVIFSNYK--- 163 (729)
Q Consensus 89 ~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~~~~~~~~~-~~i~~~~~~--- 163 (729)
..+.++.++|++++|....+-.+ +...|+..+ . |+... ++.. ......+. ......++. ++|++.+..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~-~~~~l~~~~-~--g~~~~-~p~~~~~~~~~~~--~p~gv~~d~~g~L~v~D~g~~~ 89 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQ-PEMQVAELT-Q--DGLIP-FPPQSGNAIITFD--TVLGIKSDGNGIVWMLDNGNQS 89 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGC-CSCSEEEEE-T--TEEEE-SCCCCSSCCCCCS--CEEEEEECSSSEEEEEECHHHH
T ss_pred CCcceEEECCCCCEEEEeCCCCC-CceEEEEEC-C--CCeec-CCCcccCccccee--EeeEEEEcCCCcEEEEcCCCCc
Confidence 36788999986677776544322 214466665 3 23221 1110 00001111 112234443 466666543
Q ss_pred --CCcEEEEeCCCCCCC-CeecCCC--CCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee
Q 004816 164 --DQRLYKHSIDSKDSS-PLPITPD--YGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS 238 (729)
Q Consensus 164 --~~~l~~~d~~~~~~~-~~~lt~~--~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~ 238 (729)
..+|+++|+++ ++ .+.+... .........+++++|++.++ |+.+.... ....|+++|+++++..++..
T Consensus 90 ~~~~~i~~~d~~t--g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~-yvtd~~~~----~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 90 KSVPKLVAWDTLN--NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFV-YISDPAPD----DKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp TSCCEEEEEETTT--TEEEEEEECCTTTSCTTCCCCEEEEETTTTEE-EEEECCSG----GGCEEEEEETTTCCEEEECT
T ss_pred CCCCeEEEEECCC--CeEEEEEECChhhcccccccceEEEecCCCEE-EEEcCccC----CCCeEEEEECCCCCEEEEec
Confidence 46899999987 55 3333221 01112345788999987765 44443100 13579999999887766432
Q ss_pred CC------------------------------CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEec--CCCCeee-
Q 004816 239 GS------------------------------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYIS--ENGDVYK- 285 (729)
Q Consensus 239 ~~------------------------------~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~--~~g~~~~- 285 (729)
+. ....+.+|||||+.|++.... ...||.++.+ .++....
T Consensus 163 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~-------~~~l~~~~~~~~~~~~~~~~ 235 (343)
T 2qe8_A 163 GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH-------STSMYRIKSADLSNLQLTDA 235 (343)
T ss_dssp TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS-------CSEEEEEEHHHHTCTTCCHH
T ss_pred CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC-------CCeEEEEEHHHhcCCCCChh
Confidence 20 113568999999999887642 3469998864 1222111
Q ss_pred -----eEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEee
Q 004816 286 -----RVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 338 (729)
Q Consensus 286 -----~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~ 338 (729)
.... +.. .....+++++||.+|+.. . +...|.++|+++|+...+.
T Consensus 236 ~~~~~~~~~-g~~----g~pdgia~d~~G~l~va~-~--~~~~V~~~d~~~G~~~~~~ 285 (343)
T 2qe8_A 236 ELGSKIERY-SEK----PICDGISIDKDHNIYVGD-L--AHSAIGVITSADRAYKLLV 285 (343)
T ss_dssp HHHTTCEEE-EEC----CSCSCEEECTTCCEEEEE-G--GGTEEEEEETTTTEEEEEE
T ss_pred hhhcceEec-ccC----CCCceEEECCCCCEEEEc-c--CCCeEEEEECCCCCEEEEE
Confidence 1111 111 234578999999765553 3 3457999998567665554
No 437
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.35 E-value=2.4e-05 Score=80.08 Aligned_cols=202 Identities=7% Similarity=-0.038 Sum_probs=110.9
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC-CEEEEEECCC--C
Q 004816 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG-DTVIFSNYKD--Q 165 (729)
Q Consensus 89 ~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~--~ 165 (729)
..++++.|+|.+.+||++.. .+ .|++++.+ ++.......+. . ...+.++. +.+++..... .
T Consensus 32 ~~pegia~~~~g~lyv~d~~---~~--~I~~~d~~--g~~~~~~~~~~-------~--p~gia~~~dG~l~vad~~~~~~ 95 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHE---VG--EIVSITPD--GNQQIHATVEG-------K--VSGLAFTSNGDLVATGWNADSI 95 (306)
T ss_dssp CCEEEEEECTTSCEEEEETT---TT--EEEEECTT--CCEEEEEECSS-------E--EEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeCC---CC--eEEEECCC--CceEEEEeCCC-------C--ceeEEEcCCCcEEEEeccCCcc
Confidence 46789999985569998752 33 37777766 23322221110 0 11233442 3455555332 2
Q ss_pred cEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEe--ee-----
Q 004816 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVL--VS----- 238 (729)
Q Consensus 166 ~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~l--t~----- 238 (729)
+|+.++..+ ++.+.+....+ .......+..+++ .+ |+.+.. ...||++|.++++.+.. ..
T Consensus 96 ~v~~~d~~~--g~~~~~~~~~~--~~~~~g~~~~~~~-~~-~v~d~~-------~g~i~~~d~~~~~~~v~~~~~~~~~~ 162 (306)
T 2p4o_A 96 PVVSLVKSD--GTVETLLTLPD--AIFLNGITPLSDT-QY-LTADSY-------RGAIWLIDVVQPSGSIWLEHPMLARS 162 (306)
T ss_dssp EEEEEECTT--SCEEEEEECTT--CSCEEEEEESSSS-EE-EEEETT-------TTEEEEEETTTTEEEEEEECGGGSCS
T ss_pred eEEEEcCCC--CeEEEEEeCCC--ccccCcccccCCC-cE-EEEECC-------CCeEEEEeCCCCcEeEEEECCccccc
Confidence 588888776 66655543211 1112333444444 43 444422 25799999987543321 10
Q ss_pred ----CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEE
Q 004816 239 ----GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFV 314 (729)
Q Consensus 239 ----~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~ 314 (729)
.....++. +|||++|++... ....|++++++.+|+......+... .....+++++||++ |+
T Consensus 163 ~~~~~~~~pngi--s~dg~~lyv~d~-------~~~~I~~~~~~~~g~~~~~~~~~~~-----~~P~gi~vd~dG~l-~v 227 (306)
T 2p4o_A 163 NSESVFPAANGL--KRFGNFLYVSNT-------EKMLLLRIPVDSTDKPGEPEIFVEQ-----TNIDDFAFDVEGNL-YG 227 (306)
T ss_dssp STTCCSCSEEEE--EEETTEEEEEET-------TTTEEEEEEBCTTSCBCCCEEEEES-----CCCSSEEEBTTCCE-EE
T ss_pred cccCCCCcCCCc--CcCCCEEEEEeC-------CCCEEEEEEeCCCCCCCccEEEecc-----CCCCCeEECCCCCE-EE
Confidence 11122333 999999987763 2356999999732554333333221 23457899999976 45
Q ss_pred EecCCCceEEEEEEcCCCeEEEe
Q 004816 315 TDRKNGFWNLHKWIESNNEVLAI 337 (729)
Q Consensus 315 ~~~~~g~~~l~~~d~~~g~~~~l 337 (729)
++. +...|.+++++ |+...+
T Consensus 228 a~~--~~~~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 228 ATH--IYNSVVRIAPD-RSTTII 247 (306)
T ss_dssp ECB--TTCCEEEECTT-CCEEEE
T ss_pred EeC--CCCeEEEECCC-CCEEEE
Confidence 554 34568899986 554433
No 438
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.35 E-value=4.6e-05 Score=81.99 Aligned_cols=240 Identities=8% Similarity=0.071 Sum_probs=132.4
Q ss_pred ceEEEEC--CEEEEEECCCCcEEEEeCCC---CCCCCe-ecC-CCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcc
Q 004816 148 GAFRIFG--DTVIFSNYKDQRLYKHSIDS---KDSSPL-PIT-PDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNST 220 (729)
Q Consensus 148 ~~~~~~~--~~i~~~~~~~~~l~~~d~~~---~~~~~~-~lt-~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~ 220 (729)
.+..+++ +.++++...++.|.+|++.+ + ...+ .++ .. ...+...+|+|+++.|+....+
T Consensus 67 ~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~-~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~d--------- 132 (437)
T 3gre_A 67 TSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG-EVYSSSLTYDC----SSTVTQITMIPNFDAFAVSSKD--------- 132 (437)
T ss_dssp EEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT-CCCSCSEEEEC----SSCEEEEEECTTSSEEEEEETT---------
T ss_pred EEEEECCCCCCEEEEecCCceEEEeECcccccC-cccceeeeccC----CCCEEEEEEeCCCCEEEEEeCC---------
Confidence 3444444 34566666788999999854 1 1111 111 11 2456788999999987766543
Q ss_pred eEEEEEEcC---CCceEEeee-------------CCCeeeee--eeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCC
Q 004816 221 TEIVAIALN---GQNIQVLVS-------------GSDFYAFP--RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD 282 (729)
Q Consensus 221 ~~l~~~dl~---~g~~~~lt~-------------~~~~~~~~--~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~ 282 (729)
..|.+++++ +++...... ........ .++|||+.|+... ....|.++|+. +++
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~d~~i~iwd~~-~~~ 203 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT--------NLSRVIIFDIR-TLE 203 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE--------TTSEEEEEETT-TCC
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe--------CCCeEEEEeCC-CCe
Confidence 356777763 343332221 11112222 3778999887666 23469999998 666
Q ss_pred eeeeEEecC--CCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEee--ccCccccCCcccccCcceee
Q 004816 283 VYKRVCVAG--FDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY--SLDAEFSRPLWVFGINSYEI 358 (729)
Q Consensus 283 ~~~~~~~~~--~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~--~~~~~~~~~~w~~~~~~~~~ 358 (729)
. ...+.. .. ..+..++|+|||+++++... .+ .|.++|+.+++..... .....+....|.+. |
T Consensus 204 ~--~~~~~~~~h~----~~v~~~~~s~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-----~ 269 (437)
T 3gre_A 204 R--LQIIENSPRH----GAVSSICIDEECCVLILGTT-RG--IIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF-----Y 269 (437)
T ss_dssp E--EEEEECCGGG----CCEEEEEECTTSCEEEEEET-TS--CEEEEETTTTEEEEEEBCTTCEEEEEEEECTT-----T
T ss_pred e--eEEEccCCCC----CceEEEEECCCCCEEEEEcC-CC--eEEEEEcCCccEEEEEecCCCCceEEEEeccc-----c
Confidence 4 334443 33 45678899999985555544 34 4666788777654432 22222323323321 1
Q ss_pred eeecCCCCEEEEEEEECCeEEEEEEECCCCceE-eeccC--------------------------CcceEEeeeeCCEEE
Q 004816 359 IQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIP--------------------------FTDIDNITLGNDCLF 411 (729)
Q Consensus 359 l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~-~lt~~--------------------------~~~v~~~~~~~~~~~ 411 (729)
. .++.++++...+|. |.++|+.+++.. .+... ...+..+...++.++
T Consensus 270 s----~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l 343 (437)
T 3gre_A 270 G----KNSVIVVGGSSKTF--LTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKIL 343 (437)
T ss_dssp C----TTEEEEEEESTTEE--EEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEE
T ss_pred C----CCccEEEEEcCCCc--EEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEE
Confidence 1 33445556555554 555577666532 22211 112444422255666
Q ss_pred EEEeCCCCCceEEEEEcCCCcc
Q 004816 412 VEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 412 ~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+.++.. ..++.+|+.+++.
T Consensus 344 ~s~~~d---~~i~~wd~~~~~~ 362 (437)
T 3gre_A 344 LTDEAT---SSIVMFSLNELSS 362 (437)
T ss_dssp EEEGGG---TEEEEEETTCGGG
T ss_pred EecCCC---CeEEEEECCCccc
Confidence 665543 3788889888764
No 439
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.34 E-value=1.7e-05 Score=91.34 Aligned_cols=206 Identities=10% Similarity=0.089 Sum_probs=126.0
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCC---CCCcccCCCCCcccccccccCCceEEEECCEEEEEECCC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAG---DEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD 164 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~---g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 164 (729)
+.+.++.+++ ++.|||++.. .+ .|++.+.++. +....++... +....+.++.+.++.|+|++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~---~~--~I~~~~l~g~~~~~~~~~vi~~~------l~~P~GLAvD~~~~~LY~tD~~~ 492 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLS---QR--MICSTQLDRAHGVSSYDTVISRD------IQAPDGLAVDWIHSNIYWTDSVL 492 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETT---TT--EEEEEEC--------CEEEECSS------CSCCCEEEEETTTTEEEEEETTT
T ss_pred CceEEEeecccCCeeEEeecc---ce--eEEEEeccCCCCCcceeEEEecC------CCCcceeeeeecCCcEEEEecCC
Confidence 4567888998 8999999863 23 3656555521 1122232211 12223444555577899998888
Q ss_pred CcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee-CCCee
Q 004816 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS-GSDFY 243 (729)
Q Consensus 165 ~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~-~~~~~ 243 (729)
++|+++++++ ...+.|.... .....+++++|.+.+|+++.... ...|+++++++...+.|.. +...-
T Consensus 493 ~~I~v~~ldG--~~~~~l~~~~---l~~P~gIaVDp~~g~LYwtD~g~-------~~~I~~~~~dG~~~~~lv~~~l~~P 560 (791)
T 3m0c_C 493 GTVSVADTKG--VKRKTLFREN---GSKPRAIVVDPVHGFMYWTDWGT-------PAKIKKGGLNGVDIYSLVTENIQWP 560 (791)
T ss_dssp TEEEEEETTS--SSEEEEEECT---TCCEEEEEEETTTTEEEEEECSS-------SCEEEEEETTSCCEEEEECSSCSCE
T ss_pred CeEEEEeCCC--CeEEEEEeCC---CCCcceEEEecCCCCEEEecCCC-------CCeEEEEecCCCceEEEEeCCCCCc
Confidence 8999999987 5555554321 23347889999988877765322 2579999999877766654 33456
Q ss_pred eeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCce
Q 004816 244 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFW 322 (729)
Q Consensus 244 ~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~ 322 (729)
.+.+++|++++|||+.. ....|++++++ +... ..+..... .+ .....++ .++. |||+ +. +..
T Consensus 561 ~GLavD~~~~~LYwaD~-------~~~~I~~~d~d-G~~~--~~v~~~~~-~l-~~P~gla--v~~~~lYwt-D~--~~~ 623 (791)
T 3m0c_C 561 NGITLDLLSGRLYWVDS-------KLHSISSIDVN-GGNR--KTILEDEK-RL-AHPFSLA--VFEDKVFWT-DI--INE 623 (791)
T ss_dssp EEEEEETTTTEEEEEET-------TTTEEEEEETT-SCSC--EEEEECTT-TT-SSEEEEE--EETTEEEEE-ET--TTT
T ss_pred eEEEEecCCCeEEEEeC-------CCCcEEEEecC-CCce--EEEecCCC-cc-CCCCEEE--EeCCEEEEE-EC--CCC
Confidence 77899999999998863 23569999987 3332 22333211 00 1112233 3444 5544 43 456
Q ss_pred EEEEEEcCCCeE
Q 004816 323 NLHKWIESNNEV 334 (729)
Q Consensus 323 ~l~~~d~~~g~~ 334 (729)
.|+++|..+|+.
T Consensus 624 ~I~~~dk~tG~~ 635 (791)
T 3m0c_C 624 AIFSANRLTGSD 635 (791)
T ss_dssp EEEEEETTTCCC
T ss_pred EEEEEeCCCCcc
Confidence 788888766643
No 440
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.34 E-value=2.3e-05 Score=81.55 Aligned_cols=147 Identities=7% Similarity=-0.030 Sum_probs=90.2
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE-
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ- 234 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~- 234 (729)
..+++...++.|.+||+.+ ++...+.... ....+...+|+|||+.|+....+ ..|.++|+.+++..
T Consensus 140 ~~l~s~s~dg~i~~wd~~~--~~~~~~~~~~--~~~~i~~~~~~pdg~~lasg~~d---------g~i~iwd~~~~~~~~ 206 (343)
T 3lrv_A 140 EYFIWADNRGTIGFQSYED--DSQYIVHSAK--SDVEYSSGVLHKDSLLLALYSPD---------GILDVYNLSSPDQAS 206 (343)
T ss_dssp CEEEEEETTCCEEEEESSS--SCEEEEECCC--SSCCCCEEEECTTSCEEEEECTT---------SCEEEEESSCTTSCC
T ss_pred CEEEEEeCCCcEEEEECCC--CcEEEEEecC--CCCceEEEEECCCCCEEEEEcCC---------CEEEEEECCCCCCCc
Confidence 3455556788999999987 6554433221 12346778999999976654432 46889999987754
Q ss_pred -Eeee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe-eeeEEecCCCCCcccccc--CceeCCCC
Q 004816 235 -VLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YKRVCVAGFDPTIVESPT--EPKWSSKG 309 (729)
Q Consensus 235 -~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~-~~~~~~~~~~~~~~~~~~--~~~wspDG 309 (729)
.+.. ........+|||||++|+..+ +. .|.++|+. .++. .....+.... .... .++|+|||
T Consensus 207 ~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~--------~v~iwd~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 207 SRFPVDEEAKIKEVKFADNGYWMVVEC-DQ--------TVVCFDLR-KDVGTLAYPTYTIPE----FKTGTVTYDIDDSG 272 (343)
T ss_dssp EECCCCTTSCEEEEEECTTSSEEEEEE-SS--------BEEEEETT-SSTTCBSSCCCBC---------CCEEEEECTTS
T ss_pred cEEeccCCCCEEEEEEeCCCCEEEEEe-CC--------eEEEEEcC-CCCcceeeccccccc----ccccceEEEECCCC
Confidence 4544 356677889999999988766 22 49999998 4442 1111111111 1122 38999999
Q ss_pred c-EEEEEecCCCceEEEEEEcC
Q 004816 310 E-LFFVTDRKNGFWNLHKWIES 330 (729)
Q Consensus 310 ~-l~~~~~~~~g~~~l~~~d~~ 330 (729)
+ |+..+.. .+.-.||.++-.
T Consensus 273 ~~l~~~s~~-d~~i~v~~~~~~ 293 (343)
T 3lrv_A 273 KNMIAYSNE-SNSLTIYKFDKK 293 (343)
T ss_dssp SEEEEEETT-TTEEEEEEECTT
T ss_pred CEEEEecCC-CCcEEEEEEccc
Confidence 9 4443332 345556655433
No 441
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.34 E-value=2.3e-05 Score=88.27 Aligned_cols=202 Identities=11% Similarity=0.083 Sum_probs=130.8
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEE
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~ 168 (729)
.+.++.+++ ++.+||.+.. .+ .|++.+.+++ ....++..+ +....+.++.+.++.|++++...++|+
T Consensus 38 ~~~~l~~d~~~~~lywtD~~---~~--~I~r~~~~g~-~~~~v~~~g------~~~P~GlAvD~~~~~LY~tD~~~~~I~ 105 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDIS---LK--TISRAFMNGS-ALEHVVEFG------LDYPEGMAVDWLGKNLYWADTGTNRIE 105 (628)
T ss_dssp CEEEEEEETTTTEEEEEETT---TT--EEEEEETTSC-SCEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred ceEEEEEECCCCEEEEEECC---CC--eEEEEECCCC-CcEEEEeCC------CCCcceEEEEeCCCEEEEEECCCCEEE
Confidence 456789999 9999999863 23 4677766622 333343322 112234445555789999988888999
Q ss_pred EEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeeeeee
Q 004816 169 KHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAFPRM 248 (729)
Q Consensus 169 ~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~~~ 248 (729)
+.++++ +..+.|.... .....+.+++|....|+++.... ...|+++++++...+.+..+...-.+.++
T Consensus 106 v~~~dG--~~~~~l~~~~---l~~P~~iavdp~~G~lY~tD~g~-------~~~I~r~~~dG~~~~~l~~~~~~P~Glal 173 (628)
T 4a0p_A 106 VSKLDG--QHRQVLVWKD---LDSPRALALDPAEGFMYWTEWGG-------KPKIDRAAMDGSERTTLVPNVGRANGLTI 173 (628)
T ss_dssp EEETTS--TTCEEEECSS---CCCEEEEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEEEECSCSSEEEEEE
T ss_pred EEecCC--CcEEEEEeCC---CCCcccEEEccCCCeEEEeCCCC-------CCEEEEEeCCCCceEEEECCCCCcceEEE
Confidence 999987 6555554321 23347888999877777764321 25899999998888887766666778899
Q ss_pred CCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEE
Q 004816 249 DPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWI 328 (729)
Q Consensus 249 SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d 328 (729)
++++++|+|+... ...|+.++++ ++.. .++...- .....++... +.+|++ +. ....|+++|
T Consensus 174 D~~~~~LY~aD~~-------~~~I~~~d~d-G~~~---~v~~~~l----~~P~glav~~-~~ly~t-D~--~~~~I~~~d 234 (628)
T 4a0p_A 174 DYAKRRLYWTDLD-------TNLIESSNML-GLNR---EVIADDL----PHPFGLTQYQ-DYIYWT-DW--SRRSIERAN 234 (628)
T ss_dssp ETTTTEEEEEETT-------TTEEEEEETT-SCSC---EEEEECC----SCEEEEEEET-TEEEEE-ET--TTTEEEEEE
T ss_pred ccccCEEEEEECC-------CCEEEEEcCC-CCce---EEeeccC----CCceEEEEEC-CEEEEe-cC--CCCEEEEEE
Confidence 9999999988732 3569999997 3332 2332221 2223444433 335554 43 345788888
Q ss_pred cCCCeE
Q 004816 329 ESNNEV 334 (729)
Q Consensus 329 ~~~g~~ 334 (729)
..+|+.
T Consensus 235 k~tg~~ 240 (628)
T 4a0p_A 235 KTSGQN 240 (628)
T ss_dssp TTTCCS
T ss_pred CCCCCc
Confidence 766643
No 442
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.34 E-value=2.6e-06 Score=97.43 Aligned_cols=211 Identities=9% Similarity=0.067 Sum_probs=125.6
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCC---CCCCcccCCCCCcccccccccCCceEEEECCEEEEEECC
Q 004816 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKA---GDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYK 163 (729)
Q Consensus 88 ~~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~---~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 163 (729)
...+.++.|++ ++.|||++.. .++ |++++..+ +.....++... +....+.++.+.++.|++++..
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~---~~~--I~~~~~~g~~~~~~~~~~i~~~------~~~P~glavD~~~g~LY~tD~~ 473 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLS---QRM--ICSTQLDRAHGVSSYDTVISRD------IQAPDGLAVDWIHSNIYWTDSV 473 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTT---TTS--BEEEESCCCCC-CCCCCBCCSC------C--CCCEECCCSSSBCEECCTT
T ss_pred CcceEEEccccccCeEEEEecC---CCe--EEEEecCCCCCCcceEEEEeCC------CCCcceEEEEeeCCcEEEEecc
Confidence 35678999999 8999999863 334 45554442 01222222211 1122233344456678888766
Q ss_pred CCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEee-eCCCe
Q 004816 164 DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLV-SGSDF 242 (729)
Q Consensus 164 ~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt-~~~~~ 242 (729)
.+.|+++++++ ...+.+.... .....+++++|++.+|+++.... ...|+++++++...+.+. .....
T Consensus 474 ~~~I~v~d~dg--~~~~~l~~~~---~~~P~giavDp~~g~ly~td~~~-------~~~I~~~~~dG~~~~~l~~~~l~~ 541 (699)
T 1n7d_A 474 LGTVSVADTKG--VKRKTLFREQ---GSKPRAIVVDPVHGFMYWTDWGT-------PAKIKKGGLNGVDIYSLVTENIQW 541 (699)
T ss_dssp TSCEEEEBSSS--CCEEEECCCS---SCCCCCEECCSSSSCCEECCCSS-------SCCEEBCCSSSCCCCEESCSSCSS
T ss_pred CCeEEEEecCC--CceEEEEeCC---CCCcceEEEccCCCcEEEcccCC-------CCeEEEEeCCCCCeeEEEeCCCCC
Confidence 77999999986 5555554331 12346788999888776654221 256999999876555553 33445
Q ss_pred eeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCc
Q 004816 243 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGF 321 (729)
Q Consensus 243 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~ 321 (729)
-.+.+|+|++++|+|+... ...|++++++ +... ..+..... .+ .....+.. |+. |||+. . +.
T Consensus 542 PnGlavd~~~~~LY~aD~~-------~~~I~~~d~d-G~~~--~~~~~~~~-~~-~~P~glav--d~~~lywtd-~--~~ 604 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSK-------LHSISSIDVN-GGNR--KTILEDEK-RL-AHPFSLAV--FEDKVFWTD-I--IN 604 (699)
T ss_dssp CCCEEECTTTCCEEEEETT-------TTEEEEECSS-SSCC--EEECCCSS-SC-SSCCCCEE--ETTEEEEEC-S--TT
T ss_pred ccEEEEeccCCEEEEEecC-------CCeEEEEccC-CCce--EEEEecCC-cC-CCceEeEE--ECCEEEEEe-C--CC
Confidence 5678999999999988732 3569999987 3322 22322111 00 22334444 344 66554 3 34
Q ss_pred eEEEEEEcCCCeEEEee
Q 004816 322 WNLHKWIESNNEVLAIY 338 (729)
Q Consensus 322 ~~l~~~d~~~g~~~~l~ 338 (729)
..|.+++..+|+...++
T Consensus 605 ~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 605 EAIFSANRLTGSDVNLL 621 (699)
T ss_dssp TCEEEEETTTEEEEECC
T ss_pred CeEEEEEccCCCceEEe
Confidence 67999998777655544
No 443
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.32 E-value=0.00017 Score=75.61 Aligned_cols=131 Identities=8% Similarity=-0.003 Sum_probs=75.5
Q ss_pred CCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCC--CCcEEEEEEe
Q 004816 200 PRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPW--DKAELWVGYI 277 (729)
Q Consensus 200 PdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~--~~~~l~~~d~ 277 (729)
||++++ |+.+..... -....|+++|.++++..........- +..+||||++||........... ....|.++|+
T Consensus 13 ~~~~~~-yv~~~~~~~--~~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 13 PQENRI-YVMDSVFMH--LTESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp CGGGEE-EEEECCGGG--GGGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred CCCCEE-EEECCCCCc--cccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 578875 544322100 00247999999988765433332223 78999999998876531110000 1345889998
Q ss_pred cCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEE
Q 004816 278 SENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLA 336 (729)
Q Consensus 278 ~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~ 336 (729)
+ +++......+......-......+.++|||+.+|+++. .....|.++|+++++...
T Consensus 89 ~-t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~-~~~~~v~v~d~~~~~~~~ 145 (361)
T 2oiz_A 89 D-KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNA-SPATSIGIVDVAKGDYVE 145 (361)
T ss_dssp T-TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEE-SSSEEEEEEETTTTEEEE
T ss_pred c-CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECC-CCCCeEEEEECCCCcEEE
Confidence 7 66643222222110000023567899999996666665 234678888998886543
No 444
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.31 E-value=3.4e-05 Score=91.26 Aligned_cols=205 Identities=9% Similarity=-0.062 Sum_probs=120.6
Q ss_pred ceEEEECC-EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEE
Q 004816 148 GAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (729)
Q Consensus 148 ~~~~~~~~-~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~ 226 (729)
.+++++++ .++.+...++.|++|+..+ .+....... ...+...+|+| |++|+....+ ..|.++
T Consensus 21 ~~lafspdg~~lAsgs~Dg~I~lw~~~~--~~~~~~~~~----~~~V~~l~fsp-g~~L~S~s~D---------~~v~lW 84 (902)
T 2oaj_A 21 IAAAFDFTQNLLAIATVTGEVHIYGQQQ--VEVVIKLED----RSAIKEMRFVK-GIYLVVINAK---------DTVYVL 84 (902)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEECSTT--CEEEEECSS----CCCEEEEEEET-TTEEEEEETT---------CEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCC--cEEEEEcCC----CCCEEEEEEcC-CCEEEEEECc---------CeEEEE
Confidence 34455533 4555566788999999876 443322222 24578889999 8866655543 469999
Q ss_pred EcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEE---------ecCCCCCcc
Q 004816 227 ALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC---------VAGFDPTIV 297 (729)
Q Consensus 227 dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~---------~~~~~~~~~ 297 (729)
|+.+++..............+|+|||++|+.... ...|.++|+. +++...... ..+..
T Consensus 85 d~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~--------dg~V~lwd~~-~~~~~~~~i~~~~~~~~~~~~h~---- 151 (902)
T 2oaj_A 85 SLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQ--------NGSMIVYDID-RDQLSSFKLDNLQKSSFFPAARL---- 151 (902)
T ss_dssp ETTTCSEEEEEECSSCEEEEECCTTCSEEEEEET--------TSCEEEEETT-TTEEEEEEECCHHHHHTCSSSCC----
T ss_pred ECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcC--------CCcEEEEECC-CCccccceeccccccccccccCC----
Confidence 9998875433334456778899999999876652 2348999998 665421111 12222
Q ss_pred ccccCceeCCCCc-EEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCC-------cc---cccCcceeeeeecCCCC
Q 004816 298 ESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRP-------LW---VFGINSYEIIQSHGEKN 366 (729)
Q Consensus 298 ~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~-------~w---~~~~~~~~~l~~~~~~~ 366 (729)
..+..++|+|++. ++.+... .+ .+ ++|+.+++...........+.+ .+ ......+.|.+ +++
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~-dg--~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp---dg~ 224 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYE-YV--TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP---NSL 224 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECS-SC--EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT---TSS
T ss_pred CCeEEEEEccCCCCEEEEEeC-CC--cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC---CCC
Confidence 4567789999754 5555544 34 46 7788888755433211000000 00 01123455553 544
Q ss_pred EEEEEEEECCeEEEEEEECCCCceE
Q 004816 367 LIACSYRQNGRSYLGILDDFGHSLS 391 (729)
Q Consensus 367 ~l~~~s~~~g~~~ly~~d~~~g~~~ 391 (729)
++++...+|...|| |+.+++..
T Consensus 225 -~lasgs~Dg~i~lW--d~~~g~~~ 246 (902)
T 2oaj_A 225 -HIITIHEDNSLVFW--DANSGHMI 246 (902)
T ss_dssp -EEEEEETTCCEEEE--ETTTCCEE
T ss_pred -EEEEEECCCeEEEE--ECCCCcEE
Confidence 55666677876666 66666643
No 445
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.28 E-value=0.00014 Score=77.93 Aligned_cols=237 Identities=8% Similarity=-0.008 Sum_probs=137.8
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEE
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~ 168 (729)
.+.++.|+| |+.++ +.. .++...||....+ +....... +.....++++++. ++.+...++.++
T Consensus 149 ~V~sv~fspdg~~la-sgs---~Dg~v~iWd~~~~---~~~~~~~~--------h~~~v~~~s~~~~-~l~sgs~d~~i~ 212 (420)
T 4gga_A 149 YISSVAWIKEGNYLA-VGT---SSAEVQLWDVQQQ---KRLRNMTS--------HSARVGSLSWNSY-ILSSGSRSGHIH 212 (420)
T ss_dssp CEEEEEECTTSSEEE-EEE---TTSCEEEEETTTT---EEEEEECC--------CSSCEEEEEEETT-EEEEEETTSEEE
T ss_pred cEEEEEECCCCCEEE-EEE---CCCeEEEEEcCCC---cEEEEEeC--------CCCceEEEeeCCC-EEEEEeCCCcee
Confidence 356788888 55443 332 3577777765432 21111111 1222345666665 455556778899
Q ss_pred EEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce-----EEeeeCCCee
Q 004816 169 KHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI-----QVLVSGSDFY 243 (729)
Q Consensus 169 ~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~-----~~lt~~~~~~ 243 (729)
+++..........+... ........|+|+|+.++....+ ..+.+++..+++. ..........
T Consensus 213 ~~d~~~~~~~~~~~~~h----~~~~~~~~~~~~g~~l~s~~~D---------~~v~i~~~~~~~~~~~~~~~~~~~~~~V 279 (420)
T 4gga_A 213 HHDVRVAEHHVATLSGH----SQEVCGLRWAPDGRHLASGGND---------NLVNVWPSAPGEGGWVPLQTFTQHQGAV 279 (420)
T ss_dssp EEETTSSSCEEEEEECC----SSCEEEEEECTTSSEEEEEETT---------SCEEEEESSCCSSCSCCSEEECCCSSCE
T ss_pred EeeecccceeeEEeccc----ccceeeeeecCCCCeeeeeecc---------ccceEEeeccccccceeeeeecccCCce
Confidence 99987510112233333 2345677899999987766553 3577888877642 2233334456
Q ss_pred eeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCce
Q 004816 244 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFW 322 (729)
Q Consensus 244 ~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~ 322 (729)
...+|+|++..++.+.... ....|.++|+. +++. ...+... ..+....|+++++ ++..+.. ...
T Consensus 280 ~~~~~~p~~~~~la~~~gs-----~D~~I~iwd~~-t~~~--~~~~~~~-----~~v~~~~~~~~~~~lv~~sg~--~d~ 344 (420)
T 4gga_A 280 KAVAWCPWQSNVLATGGGT-----SDRHIRIWNVC-SGAC--LSAVDAH-----SQVCSILWSPHYKELISGHGF--AQN 344 (420)
T ss_dssp EEEEECTTCTTEEEEEECT-----TTCEEEEEETT-TTEE--EEEEECS-----SCEEEEEEETTTTEEEEEECT--TTC
T ss_pred eeeeeCCCcccEEEEEeec-----CCCEEEEEeCC-cccc--ceeeccc-----cceeeeeecCCCCeEEEEEec--CCC
Confidence 6789999988887665322 23469999998 6764 2233332 3345678999999 6555432 234
Q ss_pred EEEEEEcCCCeEEE-eeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEE
Q 004816 323 NLHKWIESNNEVLA-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 383 (729)
Q Consensus 323 ~l~~~d~~~g~~~~-l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~ 383 (729)
.|.++|..+++... +......+... .|.+ +++ ++++...|+...||.+
T Consensus 345 ~I~iwd~~~~~~v~~l~gH~~~V~~l---------~~sp---dg~-~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 345 QLVIWKYPTMAKVAELKGHTSRVLSL---------TMSP---DGA-TVASAAADETLRLWRC 393 (420)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEE---------EECT---TSS-CEEEEETTTEEEEECC
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEE---------EEcC---CCC-EEEEEecCCeEEEEEC
Confidence 57777887776443 33223233333 3432 554 4566777888888854
No 446
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.27 E-value=4.7e-05 Score=75.20 Aligned_cols=200 Identities=9% Similarity=0.007 Sum_probs=118.9
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEEE
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYK 169 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~ 169 (729)
.+.++.++|.+.+|..... .+...|...+..+ |+...-++-+ ..+.+..+.++++.++.....++.+++
T Consensus 22 f~~Gl~~~~dg~Lyvstg~---~~~s~v~~iD~~t-g~v~~~i~l~-------~~~fgeGi~~~g~~lyv~t~~~~~v~v 90 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGL---YGRSSVRQVALQT-GKVENIHKMD-------DSYFGEGLTLLNEKLYQVVWLKNIGFI 90 (266)
T ss_dssp CEEEEEECSTTEEEEEECS---TTTCEEEEEETTT-CCEEEEEECC-------TTCCEEEEEEETTEEEEEETTCSEEEE
T ss_pred CcccEEEeCCCeEEEECCC---CCCCEEEEEECCC-CCEEEEEecC-------CCcceEEEEEeCCEEEEEEecCCEEEE
Confidence 3568999974566665432 2233566666663 3332222211 011233477788899999888899999
Q ss_pred EeCCCCCCC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE-EeeeC--C---Ce
Q 004816 170 HSIDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-VLVSG--S---DF 242 (729)
Q Consensus 170 ~d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~-~lt~~--~---~~ 242 (729)
+|.++ .+ ...+..+ .+ ....+++||++++ +++. ...|+++|.++.++. .+.-+ . ..
T Consensus 91 iD~~t--~~v~~~i~~g-~~-----~g~glt~Dg~~l~-vs~g--------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~ 153 (266)
T 2iwa_A 91 YDRRT--LSNIKNFTHQ-MK-----DGWGLATDGKILY-GSDG--------TSILYEIDPHTFKLIKKHNVKYNGHRVIR 153 (266)
T ss_dssp EETTT--TEEEEEEECC-SS-----SCCEEEECSSSEE-EECS--------SSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred EECCC--CcEEEEEECC-CC-----CeEEEEECCCEEE-EECC--------CCeEEEEECCCCcEEEEEEECCCCccccc
Confidence 99987 43 3334322 01 1234788999865 5442 257999999997653 34322 1 12
Q ss_pred eeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCC---------CCCccccccCceeCCCCcEEE
Q 004816 243 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF---------DPTIVESPTEPKWSSKGELFF 313 (729)
Q Consensus 243 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~---------~~~~~~~~~~~~wspDG~l~~ 313 (729)
.+...|. || +|+ +... ...+|.++|.+ ++++.....+.+. ... .....++|+|||+.+|
T Consensus 154 ~nele~~-dg-~ly-vn~~------~~~~V~vID~~-tg~V~~~I~~~g~~~~~~~~~~~~~--~v~nGIa~~~~~~~lf 221 (266)
T 2iwa_A 154 LNELEYI-NG-EVW-ANIW------QTDCIARISAK-DGTLLGWILLPNLRKKLIDEGFRDI--DVLNGIAWDQENKRIF 221 (266)
T ss_dssp EEEEEEE-TT-EEE-EEET------TSSEEEEEETT-TCCEEEEEECHHHHHHHHHTTCTTC--CCEEEEEEETTTTEEE
T ss_pred ceeEEEE-CC-EEE-EecC------CCCeEEEEECC-CCcEEEEEECCCccccccccccccc--CceEEEEEcCCCCEEE
Confidence 3456777 77 565 4422 34579999998 7876443333211 000 1335789999999666
Q ss_pred EEecCCCceEEEEEEcCC
Q 004816 314 VTDRKNGFWNLHKWIESN 331 (729)
Q Consensus 314 ~~~~~~g~~~l~~~d~~~ 331 (729)
++.. .+..|+.+++..
T Consensus 222 VTgk--~~~~v~~i~l~~ 237 (266)
T 2iwa_A 222 VTGK--LWPKLFEIKLHL 237 (266)
T ss_dssp EEET--TCSEEEEEEEEE
T ss_pred EECC--CCCeEEEEEEec
Confidence 6654 567888888754
No 447
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.27 E-value=3.4e-05 Score=82.07 Aligned_cols=209 Identities=12% Similarity=0.068 Sum_probs=120.6
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcE
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 167 (729)
..+.++.++| |+++|.....+ .+ .+...|..+ ++...-++-+ +.....+.+...++....++.+
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~--~~--~VsVID~~t-~kvv~~I~v~----------g~~~~~p~g~~~~v~~~~dG~~ 241 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSP--AP--AVGVVDLEG-KTFDRMLDVP----------DCYHIFPASPTVFYMNCRDGSL 241 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSS--SC--EEEEEETTT-TEEEEEEECC----------SEEEEEEEETTEEEEEETTSSE
T ss_pred CCcceEEEcCCCCEEEEEecCC--CC--eEEEEECCC-CeEEEEEEcC----------CceeeccCCCcEEEEEcCCCCE
Confidence 3567899999 77777765321 23 345555541 1211111111 1112334444445555567777
Q ss_pred EEEeCCCCCCCCee-----cCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee----
Q 004816 168 YKHSIDSKDSSPLP-----ITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS---- 238 (729)
Q Consensus 168 ~~~d~~~~~~~~~~-----lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~---- 238 (729)
..+++.+ ++... +.... ...+..+.++|||++++|+... ..++++|..++..+.+..
T Consensus 242 ~~V~~~~--~~v~~~~~~~~~v~~---~p~~~~~~~~~dg~~~~~~s~~---------g~V~ViD~~~~~~~v~~~~~~~ 307 (426)
T 3c75_H 242 ARVDFAD--GETKVTNTEVFHTED---ELLINHPAFSLRSGRLVWPTYT---------GKIFQADLTAEGATFRAPIEAL 307 (426)
T ss_dssp EEEECCT--TCCEEEECCCCSCTT---SCBCSCCEECTTTCEEEEEBTT---------SEEEEEEECSSCEEECCCEESS
T ss_pred EEEECCC--CcEEEEeeeeeccCC---CceeeEeeecCCCCEEEEEeCC---------CcEEEEeccCCceEEeeeeeec
Confidence 7778755 44331 11110 1122345689999998888532 469999998766544321
Q ss_pred -CC--------CeeeeeeeCCCCCeEEEEEecCC-CC-CCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCC
Q 004816 239 -GS--------DFYAFPRMDPRGERMAWIEWHHP-NM-PWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS 307 (729)
Q Consensus 239 -~~--------~~~~~~~~SPDG~~la~~~~~~~-~~-~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wsp 307 (729)
.. .......++|||++|+....+.. +. .....+|.++|+. +.+......+. .....+.|+|
T Consensus 308 ~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~-T~kvv~~I~vg-------~~P~gia~sp 379 (426)
T 3c75_H 308 TEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE-TGERINKIELG-------HEIDSINVSQ 379 (426)
T ss_dssp CTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT-TCCEEEEEEEE-------EEECEEEECC
T ss_pred cccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC-CCeEEEEEECC-------CCcCeEEEcc
Confidence 00 11112588999999877653211 10 0023579999998 67653322222 2235789999
Q ss_pred CCc-EEEEEecCCCceEEEEEEcCCCeEEE
Q 004816 308 KGE-LFFVTDRKNGFWNLHKWIESNNEVLA 336 (729)
Q Consensus 308 DG~-l~~~~~~~~g~~~l~~~d~~~g~~~~ 336 (729)
||+ ++|+.+. +...|.++|..+++...
T Consensus 380 Dg~~~lyv~n~--~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 380 DAEPLLYALSA--GTQTLHIYDAATGEELR 407 (426)
T ss_dssp SSSCEEEEEET--TTTEEEEEETTTCCEEE
T ss_pred CCCEEEEEEcC--CCCeEEEEECCCCCEEE
Confidence 999 9998886 45679999999987653
No 448
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.25 E-value=5.1e-05 Score=88.13 Aligned_cols=210 Identities=12% Similarity=0.084 Sum_probs=122.5
Q ss_pred eeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE---eeeCCCeeeeeeeCCC--CCeEEEEEecCCCC
Q 004816 191 VSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV---LVSGSDFYAFPRMDPR--GERMAWIEWHHPNM 265 (729)
Q Consensus 191 ~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~---lt~~~~~~~~~~~SPD--G~~la~~~~~~~~~ 265 (729)
..+..++|+|||++|+....+ ..|.++++.++..+. +....+.....+|+|+ |+.|+..+.
T Consensus 10 ~~V~~l~~s~dg~~latg~~d---------g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~----- 75 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSD---------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY----- 75 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETT---------TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET-----
T ss_pred ceeEEEEECCCCCeEEEEECC---------CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC-----
Confidence 456788999999987766543 457788877543332 3334456778899998 998887662
Q ss_pred CCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCC--CcEEEEEecCCCceEEEEEEcCCCe---EEEeecc
Q 004816 266 PWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK--GELFFVTDRKNGFWNLHKWIESNNE---VLAIYSL 340 (729)
Q Consensus 266 ~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspD--G~l~~~~~~~~g~~~l~~~d~~~g~---~~~l~~~ 340 (729)
...|.++|+. +++........... ..+..+.|+|+ |+++++... .| .|.++|+.++. ...+...
T Consensus 76 ---Dg~I~vwd~~-~~~~~~~~~~~~h~----~~V~~v~~sp~~~~~~l~sgs~-dg--~I~vwdl~~~~~~~~~~~~~~ 144 (753)
T 3jro_A 76 ---DGKVLIWKEE-NGRWSQIAVHAVHS----ASVNSVQWAPHEYGPLLLVASS-DG--KVSVVEFKENGTTSPIIIDAH 144 (753)
T ss_dssp ---TSCEEEEEEE-TTEEEEEEEECCCS----SCEEEEEECCGGGCSEEEEEET-TS--EEEEEECCSSSCCCCEEEECC
T ss_pred ---CCeEEEEECC-CCcccccccccCCC----CCeEEEEECCCCCCCEEEEEeC-CC--cEEEEEeecCCCcceeEeecC
Confidence 2348899998 66543445555554 56778899999 775555544 34 45556665552 2222222
Q ss_pred CccccCCcccccCc----ceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCce---EeeccCCcceEEe-eeeC---CE
Q 004816 341 DAEFSRPLWVFGIN----SYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL---SLLDIPFTDIDNI-TLGN---DC 409 (729)
Q Consensus 341 ~~~~~~~~w~~~~~----~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~---~~lt~~~~~v~~~-~~~~---~~ 409 (729)
...+....|.+... ..... .++.++++...+|..++|-+....... ..+......+..+ ..++ +.
T Consensus 145 ~~~v~~l~~~p~~~~~~~~~~~~----~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~ 220 (753)
T 3jro_A 145 AIGVNSASWAPATIEEDGEHNGT----KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 220 (753)
T ss_dssp SSCEEEEEECCCC---------C----GGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred CCceEEEEecCcccccccccccC----CCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC
Confidence 22333333433100 00000 134566677778888888766443222 2334445567777 4444 67
Q ss_pred EEEEEeCCCCCceEEEEEcCCCc
Q 004816 410 LFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 410 ~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
+++.++.. ..+..+|+.+++
T Consensus 221 ~l~s~s~D---g~I~iwd~~~~~ 240 (753)
T 3jro_A 221 YLASVSQD---RTCIIWTQDNEQ 240 (753)
T ss_dssp EEEEEESS---SCEEEEEESSSS
T ss_pred EEEEEecC---CEEEEecCCCCC
Confidence 77666644 356667776653
No 449
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.25 E-value=3.6e-06 Score=74.11 Aligned_cols=93 Identities=10% Similarity=-0.106 Sum_probs=57.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCC
Q 004816 468 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 547 (729)
Q Consensus 468 dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~ 547 (729)
+|.++.+.... +.|.||++| + .. ..|... ++ ++|.|+++|++|.+.......
T Consensus 10 ~g~~~~~~~~g------------~~~~vv~~H-~--~~--~~~~~~---l~-~~~~v~~~d~~G~G~s~~~~~------- 61 (131)
T 2dst_A 10 YGLNLVFDRVG------------KGPPVLLVA-E--EA--SRWPEA---LP-EGYAFYLLDLPGYGRTEGPRM------- 61 (131)
T ss_dssp TTEEEEEEEEC------------CSSEEEEES-S--SG--GGCCSC---CC-TTSEEEEECCTTSTTCCCCCC-------
T ss_pred CCEEEEEEEcC------------CCCeEEEEc-C--CH--HHHHHH---Hh-CCcEEEEECCCCCCCCCCCCC-------
Confidence 68777654432 136799999 2 21 122222 44 459999999998654322110
Q ss_pred CcccHHHHHHHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-CCC
Q 004816 548 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-FRD 593 (729)
Q Consensus 548 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~~ 593 (729)
. .+++.+.+..+++. ++.+++.++|||+||.+++.++. +|.
T Consensus 62 --~-~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 62 --A-PEELAHFVAGFAVM--MNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp --C-HHHHHHHHHHHHHH--TTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred --C-HHHHHHHHHHHHHH--cCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 0 34444444433333 23468999999999999999998 774
No 450
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.25 E-value=3.3e-05 Score=86.92 Aligned_cols=205 Identities=11% Similarity=0.117 Sum_probs=126.2
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcE
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 167 (729)
..+.++.+++ ++.|||.+.. .+ .|++.+..++.....++..+ +..+.+.++.+.++.|++.+...++|
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~---~~--~I~r~~~~g~~~~~~v~~~~------~~~P~GlAvD~~~~~ly~~d~~~~~I 108 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVS---EE--AIKRTEFNKTESVQNVVVSG------LLSPDGLACDWLGEKLYWTDSETNRI 108 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TT--EEEEEEC-----CEEEECSS------CSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEEEeCCCEEEEEECC---CC--eEEEEEccCCCceEEEEeCC------CCCcCeEEEEecCCEEEEEeCCCCEE
Confidence 4567888999 9999999863 23 36666655221112233222 11223444555577899998888899
Q ss_pred EEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee-CCCeeeee
Q 004816 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS-GSDFYAFP 246 (729)
Q Consensus 168 ~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~-~~~~~~~~ 246 (729)
.+.++++ ...+.|.... .....+.+++|.+.+|+++.... ...|++.++++...+.+.. ....-++.
T Consensus 109 ~v~~~dG--~~~~~l~~~~---l~~P~~Iavdp~~g~ly~tD~g~-------~~~I~r~~~dG~~~~~l~~~~~~~P~Gl 176 (619)
T 3s94_A 109 EVSNLDG--SLRKVLFWQE---LDQPRAIALDPSSGFMYWTDWGE-------VPKIERAGMDGSSRFIIINSEIYWPNGL 176 (619)
T ss_dssp EEEETTS--CSCEEEECSS---CSCCCCEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred EEEECCC--CCEEEEEeCC---CCCCceEEEecCCCeEEEeccCC-------CCEEEEEECCCCceEEEEeCCCCCCcEE
Confidence 9999987 6555554321 23347889999988877775332 2579999999877766653 34455778
Q ss_pred eeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEE
Q 004816 247 RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHK 326 (729)
Q Consensus 247 ~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~ 326 (729)
+++|++++|+|+... ...|++++++ +... ..+..+.- .....+++..| .+|+ ++. +...|++
T Consensus 177 ald~~~~~LY~aD~~-------~~~I~~~~~d-G~~~--~~~~~~~~----~~P~gi~~~~~-~ly~-td~--~~~~V~~ 238 (619)
T 3s94_A 177 TLDYEEQKLYWADAK-------LNFIHKSNLD-GTNR--QAVVKGSL----PHPFALTLFED-ILYW-TDW--STHSILA 238 (619)
T ss_dssp EEETTTTEEEEEETT-------TCCEEEESSS-CCEE--C-------------CCCEEESSS-EEEE-ECT--TTCSEEE
T ss_pred EEEccCCEEEEEeCC-------CCeEEEecCC-CCcc--EEEEeCCC----CCceEEEEeCC-EEEE-ecC--CCCEEEE
Confidence 999999999988632 3459999987 3322 22322221 33445666544 3554 444 4567889
Q ss_pred EEcCCCeE
Q 004816 327 WIESNNEV 334 (729)
Q Consensus 327 ~d~~~g~~ 334 (729)
+|..+|+.
T Consensus 239 ~d~~tg~~ 246 (619)
T 3s94_A 239 CNKYTGEG 246 (619)
T ss_dssp EESSSCCC
T ss_pred EECCCCcc
Confidence 99877754
No 451
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.24 E-value=1.4e-05 Score=82.04 Aligned_cols=248 Identities=10% Similarity=-0.036 Sum_probs=130.0
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC---CEEEEEECCC
Q 004816 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG---DTVIFSNYKD 164 (729)
Q Consensus 89 ~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~ 164 (729)
..+..++|+| |+.++- .. .++...||....+ +...+... .-|.....+..++. +.++++...+
T Consensus 14 ~~V~~v~~s~~g~~las-gs---~D~~v~lwd~~~~---~~~~~~~l------~gH~~~V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLAT-CS---SDRSVKIFDVRNG---GQILIADL------RGHEGPVWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp CCEEEEEECGGGCEEEE-EE---TTTEEEEEEEETT---EEEEEEEE------ECCSSCEEEEEECCGGGSSCEEEEETT
T ss_pred CeEEEeeEcCCCCEEEE-Ee---CCCeEEEEEecCC---CcEEEEEE------cCCCccEEEEEeCCCCCCCEEEEEECC
Confidence 3457889999 665443 32 3577777765432 11111000 00111223344432 3556666678
Q ss_pred CcEEEEeCCCCCCCCe---ecCCCCCCCceeeecceecCC--CCEEEEEEeccCCCCCCcceEEEEEEcCCCceE-Eee-
Q 004816 165 QRLYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-VLV- 237 (729)
Q Consensus 165 ~~l~~~d~~~~~~~~~---~lt~~~~~~~~~~~~~~~SPd--G~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~-~lt- 237 (729)
+.|.+||+.+ +..+ .+... ...+...+|+|+ |..|+....+ ..|.++++.++... .+.
T Consensus 81 ~~v~iWd~~~--~~~~~~~~~~~h----~~~V~~v~~~p~~~g~~lasgs~D---------~~i~lwd~~~~~~~~~~~~ 145 (316)
T 3bg1_A 81 RKVIIWREEN--GTWEKSHEHAGH----DSSVNSVCWAPHDYGLILACGSSD---------GAISLLTYTGEGQWEVKKI 145 (316)
T ss_dssp SCEEEECCSS--SCCCEEEEECCC----SSCCCEEEECCTTTCSCEEEECSS---------SCEEEEEECSSSCEEECCB
T ss_pred CEEEEEECCC--CcceEEEEccCC----CCceEEEEECCCCCCcEEEEEcCC---------CCEEEEecCCCCCcceeee
Confidence 8999999986 5322 22222 244678899998 6766554433 35777788765322 111
Q ss_pred --eCCCeeeeeeeCCCC-----------------CeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccc
Q 004816 238 --SGSDFYAFPRMDPRG-----------------ERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 298 (729)
Q Consensus 238 --~~~~~~~~~~~SPDG-----------------~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~ 298 (729)
..........|+|++ +.|+-.+ ....|.++|+...+.......+.+.. .
T Consensus 146 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs--------~D~~v~lWd~~~~~~~~~~~~l~~h~----~ 213 (316)
T 3bg1_A 146 NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGG--------CDNLIKLWKEEEDGQWKEEQKLEAHS----D 213 (316)
T ss_dssp TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCB--------TTSBCCEEEECTTSCEEEEECCBCCS----S
T ss_pred eccccCCcceEEEccccCCccccccccccCccccceEEEec--------CCCeEEEEEeCCCCccceeeecccCC----C
Confidence 122344567899983 4554332 12346777776222222233445554 5
Q ss_pred cccCceeCCCC----cEEEEEecCCCceEEEEEEcCCC---e--EEEeeccCccccCCcccccCcceeeeeecCCCCEEE
Q 004816 299 SPTEPKWSSKG----ELFFVTDRKNGFWNLHKWIESNN---E--VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIA 369 (729)
Q Consensus 299 ~~~~~~wspDG----~l~~~~~~~~g~~~l~~~d~~~g---~--~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~ 369 (729)
.+..++|+||+ ++++.... .+.-.|| ++++. + .+.+.... ...| .+.|.+ +++ ++
T Consensus 214 ~V~~v~~sp~~~~~~~~las~s~-D~~v~iw--~~~~~~~~~~~~~~~~~~~----~~v~-----~v~~sp---~g~-~l 277 (316)
T 3bg1_A 214 WVRDVAWAPSIGLPTSTIASCSQ-DGRVFIW--TCDDASSNTWSPKLLHKFN----DVVW-----HVSWSI---TAN-IL 277 (316)
T ss_dssp CEEEEECCCCSSCSCCEEEEEET-TCEEEEE--ECSSTTCCCCBCCEEEECS----SCEE-----EEEECT---TTC-CE
T ss_pred ceEEEEecCCCCCCCceEEEEcC-CCeEEEE--EccCccccchhhhhhhcCC----CcEE-----EEEEcC---CCC-EE
Confidence 56778999997 55555544 4554554 55441 1 12222222 2222 234432 444 55
Q ss_pred EEEEECCeEEEEEEECCCCceEee
Q 004816 370 CSYRQNGRSYLGILDDFGHSLSLL 393 (729)
Q Consensus 370 ~~s~~~g~~~ly~~d~~~g~~~~l 393 (729)
++...++..+||..+.+ +++..+
T Consensus 278 as~~~D~~v~lw~~~~~-g~~~~~ 300 (316)
T 3bg1_A 278 AVSGGDNKVTLWKESVD-GQWVCI 300 (316)
T ss_dssp EEEESSSCEEEEEECTT-SCEEEE
T ss_pred EEEcCCCeEEEEEECCC-CcEEEe
Confidence 56667888889977654 444433
No 452
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.24 E-value=0.00031 Score=72.21 Aligned_cols=236 Identities=11% Similarity=0.063 Sum_probs=127.0
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCC----------------CceeeecceecC-CCCEEEEEEeccCCCCCC
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGE----------------PLVSYADGIFDP-RFNRYVTVREDRRQDALN 218 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~----------------~~~~~~~~~~SP-dG~~l~~~~~~~~~~~~~ 218 (729)
.++|+....++|++++.++ +..+.+...... ...+...++++| +|+ |+ +.+..
T Consensus 31 ~~l~v~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~-v~d~~------ 100 (322)
T 2fp8_A 31 KGFYTSVQDGRVIKYEGPN--SGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LY-IVDCY------ 100 (322)
T ss_dssp SSEEEECTTSEEEEECCTT--TCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EE-EEETT------
T ss_pred CEEEEEcCCCeEEEECCCC--CceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EE-EEECC------
Confidence 4567776778899998876 554433211000 001235567888 554 43 43322
Q ss_pred cceEEEEEEcCCCceEEeeeC-----CCeeeeeeeCC-CCCeEEEEEecCCCC----------CCCCcEEEEEEecCCCC
Q 004816 219 STTEIVAIALNGQNIQVLVSG-----SDFYAFPRMDP-RGERMAWIEWHHPNM----------PWDKAELWVGYISENGD 282 (729)
Q Consensus 219 ~~~~l~~~dl~~g~~~~lt~~-----~~~~~~~~~SP-DG~~la~~~~~~~~~----------~~~~~~l~~~d~~~~g~ 282 (729)
..|++++.++++.+.+... .......++.| ||+ |++........ ......|+++|.+ +++
T Consensus 101 --~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-~~~ 176 (322)
T 2fp8_A 101 --YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS-TKE 176 (322)
T ss_dssp --TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT-TTE
T ss_pred --CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCC-CCE
Confidence 3489999887766665421 12345678999 986 76665321100 0013569999876 565
Q ss_pred eeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCC---eEEEeeccCccccCCcccccCcceeee
Q 004816 283 VYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNN---EVLAIYSLDAEFSRPLWVFGINSYEII 359 (729)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g---~~~~l~~~~~~~~~~~w~~~~~~~~~l 359 (729)
... ...+. .....++|++||+.+|+++. +..+|++++++++ +.+.+.... . .+.+.+.
T Consensus 177 ~~~--~~~~~-----~~p~gia~~~dg~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~~~~----g------P~gi~~d 237 (322)
T 2fp8_A 177 TTL--LLKEL-----HVPGGAEVSADSSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLVKIP----N------PGNIKRN 237 (322)
T ss_dssp EEE--EEEEE-----SCCCEEEECTTSSEEEEEEG--GGTEEEEEESSSTTTTCEEEEEECS----S------EEEEEEC
T ss_pred EEE--eccCC-----ccCcceEECCCCCEEEEEeC--CCCeEEEEECCCCcCCccceEEeCC----C------CCCeEEC
Confidence 422 22211 23356899999995555554 3467999998763 333332111 1 1233333
Q ss_pred eecCCCCEEEEEEEE--------CCeEEEEEEECCCCceEeeccCC----cceEEeeeeCCEEEEEEeCCCCCceEEEEE
Q 004816 360 QSHGEKNLIACSYRQ--------NGRSYLGILDDFGHSLSLLDIPF----TDIDNITLGNDCLFVEGASGVEPSSVAKVT 427 (729)
Q Consensus 360 ~~~~~~~~l~~~s~~--------~g~~~ly~~d~~~g~~~~lt~~~----~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d 427 (729)
.++.||++... .....|++++.++...+.+..+. ..+..+...++.+++.... ...|.+++
T Consensus 238 ----~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~---~~~i~~~~ 310 (322)
T 2fp8_A 238 ----ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLF---HGSVGILV 310 (322)
T ss_dssp ----TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSS---CSEEEEEE
T ss_pred ----CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecC---CCceEEEe
Confidence 33456665544 22567999999876666665442 2233443455665554322 23566666
Q ss_pred cCCC
Q 004816 428 LDDH 431 (729)
Q Consensus 428 ~~~~ 431 (729)
++..
T Consensus 311 ~~~~ 314 (322)
T 2fp8_A 311 YDKK 314 (322)
T ss_dssp C---
T ss_pred cccc
Confidence 6543
No 453
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.23 E-value=0.0001 Score=73.40 Aligned_cols=200 Identities=16% Similarity=0.119 Sum_probs=108.7
Q ss_pred ccCceEEcCCCcEEE-EeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC-CEEEEEECCCCcE
Q 004816 90 RLGGTAVDGHGRLIW-LESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG-DTVIFSNYKDQRL 167 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~-~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~l 167 (729)
.+.++.++|.+.+|+ .+. ..+ .|++++.+ + ......... . ......+.++. +.+++... .+.|
T Consensus 25 ~p~~i~~~~~g~l~v~~~~---~~~--~i~~~~~~-~-~~~~~~~~~-~------~~~p~~i~~~~~g~l~v~~~-~~~i 89 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEG---MYG--RVVKLATG-S-TGTTVLPFN-G------LYQPQGLAVDGAGTVYVTDF-NNRV 89 (270)
T ss_dssp CEEEEEECTTCCEEEEECS---SSC--EEEEECC-------EECCCC-S------CCSCCCEEECTTCCEEEEET-TTEE
T ss_pred CccceEECCCCCEEEEccC---CCC--cEEEecCC-C-cccceEeeC-C------cCCcceeEECCCCCEEEEcC-CCEE
Confidence 667888998445776 433 223 35556554 1 222222111 0 01122344443 35666655 6789
Q ss_pred EEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee-CCCeeeee
Q 004816 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS-GSDFYAFP 246 (729)
Q Consensus 168 ~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~-~~~~~~~~ 246 (729)
++++.++ +....+.... ........++|||+ | |+.+.. ...|++++..+........ +.....+.
T Consensus 90 ~~~d~~~--~~~~~~~~~~---~~~p~~i~~~~~g~-l-~v~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~p~~i 155 (270)
T 1rwi_B 90 VTLAAGS--NNQTVLPFDG---LNYPEGLAVDTQGA-V-YVADRG-------NNRVVKLAAGSKTQTVLPFTGLNDPDGV 155 (270)
T ss_dssp EEECTTC--SCCEECCCCS---CSSEEEEEECTTCC-E-EEEEGG-------GTEEEEECTTCCSCEECCCCSCCSCCCE
T ss_pred EEEeCCC--ceEeeeecCC---cCCCcceEECCCCC-E-EEEECC-------CCEEEEEECCCceeEeeccccCCCceeE
Confidence 9999886 5555443221 12346778999998 3 443322 2468888766544433322 22344567
Q ss_pred eeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEE
Q 004816 247 RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHK 326 (729)
Q Consensus 247 ~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~ 326 (729)
+++|||+ |++... ....|++++.+ ++.. ........ .....+++++||.+++... +...|++
T Consensus 156 ~~~~~g~-l~v~~~-------~~~~i~~~~~~-~~~~--~~~~~~~~----~~p~~i~~d~~g~l~v~~~---~~~~v~~ 217 (270)
T 1rwi_B 156 AVDNSGN-VYVTDT-------DNNRVVKLEAE-SNNQ--VVLPFTDI----TAPWGIAVDEAGTVYVTEH---NTNQVVK 217 (270)
T ss_dssp EECTTCC-EEEEEG-------GGTEEEEECTT-TCCE--EECCCSSC----CSEEEEEECTTCCEEEEET---TTSCEEE
T ss_pred EEeCCCC-EEEEEC-------CCCEEEEEecC-CCce--EeecccCC----CCceEEEECCCCCEEEEEC---CCCcEEE
Confidence 8999997 655542 13469999876 4432 11111111 2345678999996655543 2346888
Q ss_pred EEcCCCeEEE
Q 004816 327 WIESNNEVLA 336 (729)
Q Consensus 327 ~d~~~g~~~~ 336 (729)
+++++.....
T Consensus 218 ~~~~~~~~~~ 227 (270)
T 1rwi_B 218 LLAGSTTSTV 227 (270)
T ss_dssp ECTTCSCCEE
T ss_pred EcCCCCccee
Confidence 8987765443
No 454
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.22 E-value=0.00096 Score=67.03 Aligned_cols=277 Identities=11% Similarity=0.043 Sum_probs=144.2
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC-CEEEEEECCCCcEE
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG-DTVIFSNYKDQRLY 168 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~l~ 168 (729)
.+.++.++|.+.+|+... ..++ |++++.. ++...+.... . ......+..+. +.+++.....+.|+
T Consensus 16 ~~~~i~~d~~g~l~v~~~---~~~~--v~~~d~~--~~~~~~~~~~-~------~~~~~~i~~~~~g~l~v~~~~~~~i~ 81 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQH---KANM--ISCINLD--GKITEYPLPT-P------DAKVMCLTISSDGEVWFTENAANKIG 81 (299)
T ss_dssp CEEEEEECTTSCEEEEET---TTTE--EEEECTT--CCEEEEECSS-T------TCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CccceEECCCCCEEEEec---CCCc--EEEEcCC--CCeEEecCCc-c------cCceeeEEECCCCCEEEeCCCCCeEE
Confidence 567788887556666543 1233 5555544 2332222110 0 01112234433 35666665567899
Q ss_pred EEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee--CCCeeeee
Q 004816 169 KHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS--GSDFYAFP 246 (729)
Q Consensus 169 ~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~--~~~~~~~~ 246 (729)
+++.++ ..+.+.... .........++|||+. ++.... ...|++++. +++...+.. ......+.
T Consensus 82 ~~~~~g---~~~~~~~~~--~~~~~~~i~~~~~g~l-~v~~~~--------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i 146 (299)
T 2z2n_A 82 RITKKG---IIKEYTLPN--PDSAPYGITEGPNGDI-WFTEMN--------GNRIGRITD-DGKIREYELPNKGSYPSFI 146 (299)
T ss_dssp EECTTS---CEEEEECSS--TTCCEEEEEECTTSCE-EEEETT--------TTEEEEECT-TCCEEEEECSSTTCCEEEE
T ss_pred EECCCC---cEEEEeCCC--cCCCceeeEECCCCCE-EEEecC--------CceEEEECC-CCCEEEecCCCCCCCCceE
Confidence 999863 344333110 0234567789999973 333221 146999998 566555432 22345677
Q ss_pred eeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEE
Q 004816 247 RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHK 326 (729)
Q Consensus 247 ~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~ 326 (729)
+++|||+ |++... ....|+++|. +++.... ...... ..+..+.+++||++++.... ...|++
T Consensus 147 ~~~~~g~-l~v~~~-------~~~~i~~~~~--~g~~~~~-~~~~~~----~~~~~i~~~~~g~l~v~~~~---~~~i~~ 208 (299)
T 2z2n_A 147 TLGSDNA-LWFTEN-------QNNAIGRITE--SGDITEF-KIPTPA----SGPVGITKGNDDALWFVEII---GNKIGR 208 (299)
T ss_dssp EECTTSC-EEEEET-------TTTEEEEECT--TCCEEEE-ECSSTT----CCEEEEEECTTSSEEEEETT---TTEEEE
T ss_pred EEcCCCC-EEEEeC-------CCCEEEEEcC--CCcEEEe-eCCCCC----CcceeEEECCCCCEEEEccC---CceEEE
Confidence 8999996 555542 2345888886 3554321 122222 33456788899886655432 346889
Q ss_pred EEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccC--CcceEEee
Q 004816 327 WIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIP--FTDIDNIT 404 (729)
Q Consensus 327 ~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~--~~~v~~~~ 404 (729)
+|+ +++.+.+.... .... ...+.+. .++.+++... +...|++++.+ ++.+.+..+ ...+..+.
T Consensus 209 ~~~-~g~~~~~~~~~-~~~~------~~~i~~~----~~g~l~v~~~--~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~ 273 (299)
T 2z2n_A 209 ITT-SGEITEFKIPT-PNAR------PHAITAG----AGIDLWFTEW--GANKIGRLTSN-NIIEEYPIQIKSAEPHGIC 273 (299)
T ss_dssp ECT-TCCEEEEECSS-TTCC------EEEEEEC----STTCEEEEET--TTTEEEEEETT-TEEEEEECSSSSCCEEEEE
T ss_pred ECC-CCcEEEEECCC-CCCC------ceeEEEC----CCCCEEEecc--CCceEEEECCC-CceEEEeCCCCCCccceEE
Confidence 998 66655542110 1111 1233333 3345665542 33468888884 565555322 23455553
Q ss_pred eeCCEEEEEEeCCCCCceEEEEEcCCCc
Q 004816 405 LGNDCLFVEGASGVEPSSVAKVTLDDHK 432 (729)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~ly~~d~~~~~ 432 (729)
.+++.+++... ...++++++++++
T Consensus 274 ~~~g~l~v~~~----~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 274 FDGETIWFAME----CDKIGKLTLIKDN 297 (299)
T ss_dssp ECSSCEEEEET----TTEEEEEEEC---
T ss_pred ecCCCEEEEec----CCcEEEEEcCccc
Confidence 35555554432 2467888776654
No 455
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.22 E-value=6.5e-05 Score=73.31 Aligned_cols=197 Identities=10% Similarity=-0.018 Sum_probs=110.6
Q ss_pred EEECCEEEEEECCCC--cEEEEeCCCCCCCCe-ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEE
Q 004816 151 RIFGDTVIFSNYKDQ--RLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (729)
Q Consensus 151 ~~~~~~i~~~~~~~~--~l~~~d~~~~~~~~~-~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~d 227 (729)
.++++.++.+....+ .|.++|+++ ++.. .+.-. .++..--+.++|++|+...... ..++++|
T Consensus 49 ~~~~~~LyestG~~g~S~v~~vD~~T--gkv~~~~~l~-----~~~FgeGit~~g~~ly~ltw~~--------~~v~v~D 113 (262)
T 3nol_A 49 FYRNGYFYESTGLNGRSSIRKVDIES--GKTLQQIELG-----KRYFGEGISDWKDKIVGLTWKN--------GLGFVWN 113 (262)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTT--CCEEEEEECC-----TTCCEEEEEEETTEEEEEESSS--------SEEEEEE
T ss_pred EEECCEEEEECCCCCCceEEEEECCC--CcEEEEEecC-----CccceeEEEEeCCEEEEEEeeC--------CEEEEEE
Confidence 345667777766554 899999998 6543 33222 1112222566788876664432 6799999
Q ss_pred cCCCceE-EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeC
Q 004816 228 LNGQNIQ-VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 306 (729)
Q Consensus 228 l~~g~~~-~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ws 306 (729)
.++.+.. ++.-+. .+...++||++|+... . ...|+++|.+ +.+........... .-...+..+.|.
T Consensus 114 ~~t~~~~~ti~~~~---eG~glt~dg~~L~~Sd--G------s~~i~~iDp~-T~~v~~~I~V~~~g-~~~~~lNELe~~ 180 (262)
T 3nol_A 114 IRNLRQVRSFNYDG---EGWGLTHNDQYLIMSD--G------TPVLRFLDPE-SLTPVRTITVTAHG-EELPELNELEWV 180 (262)
T ss_dssp TTTCCEEEEEECSS---CCCCEEECSSCEEECC--S------SSEEEEECTT-TCSEEEEEECEETT-EECCCEEEEEEE
T ss_pred CccCcEEEEEECCC---CceEEecCCCEEEEEC--C------CCeEEEEcCC-CCeEEEEEEeccCC-ccccccceeEEE
Confidence 9987764 443322 3345678998875433 2 2459999988 66643222221111 000122346786
Q ss_pred CCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccc-----cCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEE
Q 004816 307 SKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEF-----SRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 381 (729)
Q Consensus 307 pDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~-----~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly 381 (729)
||+|| .... ....|.++|+++|++....+...-. ..+. ....+.+++.+ +.++||++. ..+..||
T Consensus 181 -~G~ly-an~w--~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~-~~vlNGIA~dp---~~~~lfVTG--K~Wp~~~ 250 (262)
T 3nol_A 181 -DGEIF-ANVW--QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSP-IDVLNGIAWDK---EHHRLFVTG--KLWPKVF 250 (262)
T ss_dssp -TTEEE-EEET--TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSS-CCCEEEEEEET---TTTEEEEEE--TTCSEEE
T ss_pred -CCEEE-EEEc--cCCeEEEEECCCCcEEEEEECCcCccccccccCc-CCceEEEEEcC---CCCEEEEEC--CCCCceE
Confidence 78755 4433 2358999999999987655332110 0010 01123455654 566777665 4556777
Q ss_pred EEEC
Q 004816 382 ILDD 385 (729)
Q Consensus 382 ~~d~ 385 (729)
.+.+
T Consensus 251 ev~~ 254 (262)
T 3nol_A 251 EITL 254 (262)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6643
No 456
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.20 E-value=7.9e-06 Score=93.50 Aligned_cols=223 Identities=9% Similarity=0.018 Sum_probs=129.3
Q ss_pred CcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCC----CceEEee-eC
Q 004816 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG----QNIQVLV-SG 239 (729)
Q Consensus 165 ~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~----g~~~~lt-~~ 239 (729)
..|+++++++ .....+... ......+.|+++++.|+++... ...|+++++++ .....+. .+
T Consensus 386 ~~I~~id~~~--~~~~~~~~~----~~~p~gla~d~~~~~Ly~sD~~--------~~~I~~~~~~g~~~~~~~~~~i~~~ 451 (699)
T 1n7d_A 386 HEVRKMTLDR--SEYTSLIPN----LRNVVALDTEVASNRIYWSDLS--------QRMICSTQLDRAHGVSSYDTVISRD 451 (699)
T ss_dssp TC-CEECTTS--CCEECCSCC----CTTCCCCEEETTTTEEEECCTT--------TTSBEEEESCCCCC-CCCCCBCCSC
T ss_pred cceEEEeCCC--Ccceeeecc----CcceEEEccccccCeEEEEecC--------CCeEEEEecCCCCCCcceEEEEeCC
Confidence 4689999987 555554433 1233677899988887665332 24699999986 2333332 22
Q ss_pred CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecC
Q 004816 240 SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRK 318 (729)
Q Consensus 240 ~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~ 318 (729)
.....+.++.+.++.|+|+... ...|++++++ +... ..++.... .....++++|++. |||+ +.
T Consensus 452 ~~~P~glavD~~~g~LY~tD~~-------~~~I~v~d~d-g~~~--~~l~~~~~----~~P~giavDp~~g~ly~t-d~- 515 (699)
T 1n7d_A 452 IQAPDGLAVDWIHSNIYWTDSV-------LGTVSVADTK-GVKR--KTLFREQG----SKPRAIVVDPVHGFMYWT-DW- 515 (699)
T ss_dssp C--CCCEECCCSSSBCEECCTT-------TSCEEEEBSS-SCCE--EEECCCSS----CCCCCEECCSSSSCCEEC-CC-
T ss_pred CCCcceEEEEeeCCcEEEEecc-------CCeEEEEecC-CCce--EEEEeCCC----CCcceEEEccCCCcEEEc-cc-
Confidence 2334567888878888876522 3458999887 3332 22333221 3446778888766 6554 43
Q ss_pred CCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccC--
Q 004816 319 NGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIP-- 396 (729)
Q Consensus 319 ~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~-- 396 (729)
.....|+++++++...+.+.... + .| .+.+.+.+ +++.|||+. .+...|+++++++...+.+...
T Consensus 516 ~~~~~I~~~~~dG~~~~~l~~~~--l---~~---PnGlavd~---~~~~LY~aD--~~~~~I~~~d~dG~~~~~~~~~~~ 582 (699)
T 1n7d_A 516 GTPAKIKKGGLNGVDIYSLVTEN--I---QW---PNGITLDL---LSGRLYWVD--SKLHSISSIDVNGGNRKTILEDEK 582 (699)
T ss_dssp SSSCCEEBCCSSSCCCCEESCSS--C---SS---CCCEEECT---TTCCEEEEE--TTTTEEEEECSSSSCCEEECCCSS
T ss_pred CCCCeEEEEeCCCCCeeEEEeCC--C---CC---ccEEEEec---cCCEEEEEe--cCCCeEEEEccCCCceEEEEecCC
Confidence 22367999988776555544221 1 11 12344432 567788876 3455789999988766655432
Q ss_pred -CcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 397 -FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 397 -~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
......+..+++.+|+... ....|++++..+|+.
T Consensus 583 ~~~~P~glavd~~~lywtd~---~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 583 RLAHPFSLAVFEDKVFWTDI---INEAIFSANRLTGSD 617 (699)
T ss_dssp SCSSCCCCEEETTEEEEECS---TTTCEEEEETTTEEE
T ss_pred cCCCceEeEEECCEEEEEeC---CCCeEEEEEccCCCc
Confidence 1222344455666655542 235788888776653
No 457
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=98.19 E-value=7.6e-06 Score=85.63 Aligned_cols=98 Identities=12% Similarity=0.052 Sum_probs=62.2
Q ss_pred CEEEEEcCCCCCCcc-----ccch----hhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHH--
Q 004816 493 PLLVKSHGGPTSEAR-----GILN----LSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATF-- 561 (729)
Q Consensus 493 P~vv~~hGg~~~~~~-----~~~~----~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~-- 561 (729)
|.||++||..+.... ..|. .+++.|+++||.|+++|++|.+ ..... ..++...++.
T Consensus 7 ~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G---~s~~~----------a~~l~~~i~~~~ 73 (387)
T 2dsn_A 7 APIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS---SNWDR----------ACEAYAQLVGGT 73 (387)
T ss_dssp CCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSB---CHHHH----------HHHHHHHHHCEE
T ss_pred CcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCC---Ccccc----------HHHHHHHHHhhh
Confidence 458889997543211 2343 3448888999999999999643 22211 1112222210
Q ss_pred ------HH----------------hCCCCCCCcEEEEEcChHHHHHHHHHh--------------------CC------C
Q 004816 562 ------LV----------------GSGKADEKRLCITGGSAGGYTTLAALA--------------------FR------D 593 (729)
Q Consensus 562 ------l~----------------~~~~~d~~ri~i~G~S~GG~~a~~~~~--------------------~~------~ 593 (729)
+. +. ....+++.|+||||||.++..++. +| +
T Consensus 74 vDy~~~~a~~~~~~~~~~~l~~ll~~-~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~ 152 (387)
T 2dsn_A 74 VDYGAAHAAKHGHARFGRTYPGLLPE-LKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHH 152 (387)
T ss_dssp EECCHHHHHHHTSCSEEEEECCSCGG-GGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCC
T ss_pred hhhhhhhhhhccchhhhhhHHHHHHH-hcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCcccccccc
Confidence 00 00 023478999999999999988885 35 7
Q ss_pred cceEEEEeccc
Q 004816 594 TFKAGASLYGV 604 (729)
Q Consensus 594 ~~~a~v~~~~~ 604 (729)
+++.+|++++.
T Consensus 153 ~V~sLV~i~tP 163 (387)
T 2dsn_A 153 FVLSVTTIATP 163 (387)
T ss_dssp CEEEEEEESCC
T ss_pred ceeEEEEECCC
Confidence 89999998764
No 458
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.18 E-value=2.3e-05 Score=81.03 Aligned_cols=155 Identities=14% Similarity=0.094 Sum_probs=97.3
Q ss_pred EEEEEECCC--C--cEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEecc--CC------C--CCCcce
Q 004816 156 TVIFSNYKD--Q--RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDR--RQ------D--ALNSTT 221 (729)
Q Consensus 156 ~i~~~~~~~--~--~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~--~~------~--~~~~~~ 221 (729)
.|+.++... . .||.++.++ +..+.+..-.+..-.+.+|..+.|||+++ +.... .+ + ......
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~--~~~~~~~~~~g~~~~~pND~~v~~~G~fy--vt~~~~ftd~~~~~~e~~~~~~~g 203 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEE--KSLLHLKTIRHKLLPSVNDIVAVGPEHFY--ATNDHYFIDPYLKSWEMHLGLAWS 203 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTT--TEEEEEEEECCTTCSSEEEEEEEETTEEE--EEESCSCSSHHHHHHHHHTTCCCE
T ss_pred EEEEEECCCCCCeEEEEEEECCC--CEEEEEeccccCCCCCCceEEEeCCCCEE--ecCCcEeCCcccccchhhccCCcc
Confidence 455554442 2 578888765 44444433222223567899999999853 22221 00 0 011247
Q ss_pred EEEEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCcccccc
Q 004816 222 EIVAIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 301 (729)
Q Consensus 222 ~l~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 301 (729)
.||+++. ++.+.+..+..+.++.+|||||++|+++... ...|++++++.+|++.+.+.+ ... ....
T Consensus 204 ~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~-------~~~I~~~~~~~~g~l~~~~~~-~~~----g~PD 269 (355)
T 3sre_A 204 FVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELL-------AHKIHVYEKHANWTLTPLRVL-SFD----TLVD 269 (355)
T ss_dssp EEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGG-------GTEEEEEEECTTSCEEEEEEE-ECS----SEEE
T ss_pred EEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCC-------CCeEEEEEECCCCcEecCEEE-eCC----CCCc
Confidence 8999987 4677777777788999999999999888743 356999999756777666655 333 5556
Q ss_pred CceeCC-CCcEEEEEecCCCceEEEEEEcC
Q 004816 302 EPKWSS-KGELFFVTDRKNGFWNLHKWIES 330 (729)
Q Consensus 302 ~~~wsp-DG~l~~~~~~~~g~~~l~~~d~~ 330 (729)
.++..+ ||.++..... +..++.+++++
T Consensus 270 Gi~vD~e~G~lwva~~~--~g~~v~~~~P~ 297 (355)
T 3sre_A 270 NISVDPVTGDLWVGCHP--NGMRIFFYDAE 297 (355)
T ss_dssp EEEECTTTCCEEEEEES--CHHHHHSCCTT
T ss_pred eEEEeCCCCcEEEEecC--CceEEEEECCC
Confidence 788888 5886665543 23345555554
No 459
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.18 E-value=9.2e-05 Score=77.96 Aligned_cols=212 Identities=13% Similarity=0.054 Sum_probs=109.7
Q ss_pred CcEEEEeCCCCCCCCe-ecCCCCCCCceeeecceecCCCCEEEEEEe-c------cCCCCC----CcceEEEEEEcCCCc
Q 004816 165 QRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVRE-D------RRQDAL----NSTTEIVAIALNGQN 232 (729)
Q Consensus 165 ~~l~~~d~~~~~~~~~-~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~-~------~~~~~~----~~~~~l~~~dl~~g~ 232 (729)
+.|.++|.++ .+.. ++..+.. +.....++.|+||++. +++++ . .+..+. .....|.++|+++++
T Consensus 164 g~v~vlD~~T--~~v~~~~~~~~~-~~~~~Yd~~~~p~~~~-mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k 239 (462)
T 2ece_A 164 GGILMLDHYS--FEPLGKWEIDRG-DQYLAYDFWWNLPNEV-LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK 239 (462)
T ss_dssp CEEEEECTTT--CCEEEECCSBCT-TCCCCCCEEEETTTTE-EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred CeEEEEECCC--CeEEEEEccCCC-CccccceEEECCCCCE-EEEccCcCccccccccchhhhhhccCCEEEEEECCCCc
Confidence 5899999987 5533 3332211 1122246789999995 45543 1 000000 124789999999876
Q ss_pred eEE-eeeCCCeeee-----eeeCCCCCeEEEEEe-cCCCCCCCCcEEEEEEecCCCCeeeeEEe--cCCCCCc-------
Q 004816 233 IQV-LVSGSDFYAF-----PRMDPRGERMAWIEW-HHPNMPWDKAELWVGYISENGDVYKRVCV--AGFDPTI------- 296 (729)
Q Consensus 233 ~~~-lt~~~~~~~~-----~~~SPDG~~la~~~~-~~~~~~~~~~~l~~~d~~~~g~~~~~~~~--~~~~~~~------- 296 (729)
..+ +.-+.. ... +.++|||++++.+.. +... ...+|+++..+ +|+......+ ......+
T Consensus 240 ~~~tI~vg~~-g~~P~~i~f~~~Pdg~~aYV~~e~~~~~---Lss~V~v~~~d-~g~~~~~~vIdi~~~~v~~~lp~~~~ 314 (462)
T 2ece_A 240 RIHSLTLGEE-NRMALELRPLHDPTKLMGFINMVVSLKD---LSSSIWLWFYE-DGKWNAEKVIEIPAEPLEGNLPEILK 314 (462)
T ss_dssp EEEEEESCTT-EEEEEEEEECSSTTCCEEEEEEEEETTT---CCEEEEEEEEE-TTEEEEEEEEEECCEECCSSCCGGGG
T ss_pred EeeEEecCCC-CCccceeEeeECCCCCEEEEEEeeeccC---CCceEEEEEec-CCceeEEEEEeCCCcccccccccccc
Confidence 543 332211 122 346999997765542 1111 13468777766 4654333221 1100000
Q ss_pred -----cccccCceeCCCCcEEEEEecCCCceEEEEEEcC-CCeEEEee--ccCccccCCcc------cccCcceeeeeec
Q 004816 297 -----VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES-NNEVLAIY--SLDAEFSRPLW------VFGINSYEIIQSH 362 (729)
Q Consensus 297 -----~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~-~g~~~~l~--~~~~~~~~~~w------~~~~~~~~~l~~~ 362 (729)
......+..|+||+.+|++++ +...|.++|.. .++.+.+. .-.+.+..+.+ ..+...+.+.+
T Consensus 315 ~f~~~~~~pa~I~lS~DGrfLYVSnr--g~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSp-- 390 (462)
T 2ece_A 315 PFKAVPPLVTDIDISLDDKFLYLSLW--GIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISR-- 390 (462)
T ss_dssp GGTEECCCCCCEEECTTSCEEEEEET--TTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECT--
T ss_pred ccccCCCceeEEEECCCCCEEEEEeC--CCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcC--
Confidence 023567889999997778877 44567777753 33333222 11111100010 11235566665
Q ss_pred CCCCEEEEEEE-----------ECCeEEEEEE--ECCCCceE
Q 004816 363 GEKNLIACSYR-----------QNGRSYLGIL--DDFGHSLS 391 (729)
Q Consensus 363 ~~~~~l~~~s~-----------~~g~~~ly~~--d~~~g~~~ 391 (729)
|++++|++.. +.....++.+ |.++| ++
T Consensus 391 -DGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G-L~ 430 (462)
T 2ece_A 391 -DGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG-LE 430 (462)
T ss_dssp -TSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC-EE
T ss_pred -CCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC-ce
Confidence 7888887762 2233456644 66666 44
No 460
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.17 E-value=5.1e-05 Score=89.74 Aligned_cols=204 Identities=9% Similarity=-0.021 Sum_probs=118.8
Q ss_pred eeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcE
Q 004816 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAE 271 (729)
Q Consensus 192 ~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~ 271 (729)
.+...+|||||+.|+....+ ..|++++..+++..............+|+| |++|+-.+ ....
T Consensus 19 ~V~~lafspdg~~lAsgs~D---------g~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s--------~D~~ 80 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVT---------GEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVIN--------AKDT 80 (902)
T ss_dssp CEEEEEEETTTTEEEEEETT---------SEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEE--------TTCE
T ss_pred CcEEEEECCCCCEEEEEeCC---------CEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEE--------CcCe
Confidence 35778999999987765543 468888988765544434445677889999 88777665 2345
Q ss_pred EEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCcc---ccCCc
Q 004816 272 LWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAE---FSRPL 348 (729)
Q Consensus 272 l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~---~~~~~ 348 (729)
|.++|+. +++. ...+. .. ..+..+.|+|||+++++... .| .|.++|+++++.....-.... .....
T Consensus 81 v~lWd~~-~~~~--~~~~~-~~----~~V~~v~~sp~g~~l~sgs~-dg--~V~lwd~~~~~~~~~~i~~~~~~~~~~~~ 149 (902)
T 2oaj_A 81 VYVLSLY-SQKV--LTTVF-VP----GKITSIDTDASLDWMLIGLQ-NG--SMIVYDIDRDQLSSFKLDNLQKSSFFPAA 149 (902)
T ss_dssp EEEEETT-TCSE--EEEEE-CS----SCEEEEECCTTCSEEEEEET-TS--CEEEEETTTTEEEEEEECCHHHHHTCSSS
T ss_pred EEEEECC-CCcE--EEEEc-CC----CCEEEEEECCCCCEEEEEcC-CC--cEEEEECCCCccccceecccccccccccc
Confidence 9999998 6664 22332 22 45677899999995555544 34 456668888765322100000 00000
Q ss_pred ccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceE-eeccC------------------CcceEEe-eeeCC
Q 004816 349 WVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIP------------------FTDIDNI-TLGND 408 (729)
Q Consensus 349 w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~-~lt~~------------------~~~v~~~-~~~~~ 408 (729)
-......+.|.| ++..++++...+|.. ++|+.+++.. .+... ...|..+ ..+++
T Consensus 150 h~~~V~sl~~sp---~~~~~l~~g~~dg~v---lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg 223 (902)
T 2oaj_A 150 RLSPIVSIQWNP---RDIGTVLISYEYVTL---TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS 223 (902)
T ss_dssp CCCCCCEEEEET---TEEEEEEEECSSCEE---EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS
T ss_pred CCCCeEEEEEcc---CCCCEEEEEeCCCcE---EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC
Confidence 001123445543 444555566666654 4577776643 23211 1346666 44455
Q ss_pred EEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 409 CLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 409 ~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
.+++.++.. ..+.++|+.+++.
T Consensus 224 ~~lasgs~D---g~i~lWd~~~g~~ 245 (902)
T 2oaj_A 224 LHIITIHED---NSLVFWDANSGHM 245 (902)
T ss_dssp SEEEEEETT---CCEEEEETTTCCE
T ss_pred CEEEEEECC---CeEEEEECCCCcE
Confidence 566665544 3577788877764
No 461
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.16 E-value=1.7e-05 Score=87.65 Aligned_cols=153 Identities=10% Similarity=-0.058 Sum_probs=92.2
Q ss_pred CceEEEECCEEEEEECCCCcEEEEeCCCCCCCCe-ecCCCCCCCceeeecc--eecCCC-CEEEEEEeccCCCCCCcceE
Q 004816 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADG--IFDPRF-NRYVTVREDRRQDALNSTTE 222 (729)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~-~lt~~~~~~~~~~~~~--~~SPdG-~~l~~~~~~~~~~~~~~~~~ 222 (729)
..+++++++..+++...++.|.+||+.++ ..+. .+... ...+..+ .|+|+| +.|+-...+ ..
T Consensus 269 v~sv~~s~~~~lasgs~DgtV~lWD~~~~-~~~~~~~~~H----~~~V~sv~~~~s~~g~~~laS~S~D---------~t 334 (524)
T 2j04_B 269 ITTFDFLSPTTVVCGFKNGFVAEFDLTDP-EVPSFYDQVH----DSYILSVSTAYSDFEDTVVSTVAVD---------GY 334 (524)
T ss_dssp EEEEEESSSSEEEEEETTSEEEEEETTBC-SSCSEEEECS----SSCEEEEEEECCTTSCCEEEEEETT---------SE
T ss_pred EEEEEecCCCeEEEEeCCCEEEEEECCCC-CCceEEeecc----cccEEEEEEEcCCCCCeEEEEeccC---------Ce
Confidence 34455555545677778899999999861 2222 23333 2345665 579998 654444433 46
Q ss_pred EEEEEcCCCce-EEeeeCC--CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCcccc
Q 004816 223 IVAIALNGQNI-QVLVSGS--DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVES 299 (729)
Q Consensus 223 l~~~dl~~g~~-~~lt~~~--~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~ 299 (729)
|.++|+.+++. ..+.... ......+|||||+.|+..+. ...|.++|+. ++.. ...+.+.. ..
T Consensus 335 vklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~--------d~tv~lwd~~-~~~~--~~~l~gH~----~~ 399 (524)
T 2j04_B 335 FYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDG--------ASSLRAVPSR-AAFA--VHPLVSRE----TT 399 (524)
T ss_dssp EEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECS--------SSEEEEEETT-CTTC--CEEEEECS----SC
T ss_pred EEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCC--------CCcEEEEECc-cccc--ceeeecCC----Cc
Confidence 88889877543 2232211 12456799999998765441 2348888987 5653 23344554 56
Q ss_pred ccCceeCCCCcEEEEEecCCCceEEEEEEcCC
Q 004816 300 PTEPKWSSKGELFFVTDRKNGFWNLHKWIESN 331 (729)
Q Consensus 300 ~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~ 331 (729)
+..++|||||++++.... .+. +.++|+..
T Consensus 400 V~sva~Sp~g~~l~Sgs~-Dgt--v~lwd~~~ 428 (524)
T 2j04_B 400 ITAIGVSRLHPMVLAGSA-DGS--LIITNAAR 428 (524)
T ss_dssp EEEEECCSSCCBCEEEET-TTE--EECCBSCS
T ss_pred eEEEEeCCCCCeEEEEEC-CCE--EEEEechH
Confidence 778899999994444444 354 44456544
No 462
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.15 E-value=0.00017 Score=73.53 Aligned_cols=231 Identities=9% Similarity=0.018 Sum_probs=120.9
Q ss_pred CCCCcEEEEeCCCCCCCCeecCCCC-CCCceeeecceecCC-CCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEe-ee
Q 004816 162 YKDQRLYKHSIDSKDSSPLPITPDY-GEPLVSYADGIFDPR-FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVL-VS 238 (729)
Q Consensus 162 ~~~~~l~~~d~~~~~~~~~~lt~~~-~~~~~~~~~~~~SPd-G~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~l-t~ 238 (729)
..++.|+++++.+ ++.+.+.... ...........++|| |+ |++.... ..|++++.+ ++.+.+ ..
T Consensus 43 ~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~---------~~l~~~d~~-g~~~~~~~~ 109 (314)
T 1pjx_A 43 KPAGEILRIDLKT--GKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMR---------LGLLVVQTD-GTFEEIAKK 109 (314)
T ss_dssp EECCEEEEECTTT--CCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETT---------TEEEEEETT-SCEEECCSB
T ss_pred CCCCEEEEEeCCC--CcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECC---------CCEEEEeCC-CCEEEEEec
Confidence 3456899999877 6666554310 000123467789999 65 4443321 369999998 777766 43
Q ss_pred CC-----CeeeeeeeCCCCCeEEEEEecCC--------CCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCcee
Q 004816 239 GS-----DFYAFPRMDPRGERMAWIEWHHP--------NMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 305 (729)
Q Consensus 239 ~~-----~~~~~~~~SPDG~~la~~~~~~~--------~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~w 305 (729)
.. .......++|||+ |++...... ........|++++.+ ++... ..... .....+.|
T Consensus 110 ~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~--~~~~~-----~~~~~i~~ 179 (314)
T 1pjx_A 110 DSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQMIQ--VDTAF-----QFPNGIAV 179 (314)
T ss_dssp CTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCEEE--EEEEE-----SSEEEEEE
T ss_pred cCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC--CCEEE--eccCC-----CCcceEEE
Confidence 21 2245678999997 555553210 000012468888754 44322 22211 22346789
Q ss_pred C----CCCcEEEEEecCCCceEEEEEEcC-CCeEEE---eeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCe
Q 004816 306 S----SKGELFFVTDRKNGFWNLHKWIES-NNEVLA---IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR 377 (729)
Q Consensus 306 s----pDG~l~~~~~~~~g~~~l~~~d~~-~g~~~~---l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~ 377 (729)
+ +||+.+|..+. ....|++++++ +++... +....... .. ....+.+. .++.+++....++
T Consensus 180 ~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~--~~---~p~~i~~d----~~G~l~v~~~~~~- 247 (314)
T 1pjx_A 180 RHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTH--EG---GADGMDFD----EDNNLLVANWGSS- 247 (314)
T ss_dssp EECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCS--SC---EEEEEEEB----TTCCEEEEEETTT-
T ss_pred ecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCC--CC---CCCceEEC----CCCCEEEEEcCCC-
Confidence 9 99984444443 23468888865 454321 11111000 00 11223333 3445665554333
Q ss_pred EEEEEEECCCCc-eEeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCC
Q 004816 378 SYLGILDDFGHS-LSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDD 430 (729)
Q Consensus 378 ~~ly~~d~~~g~-~~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~ 430 (729)
.|++++.++++ ...+..+...+..+ ..+++..+++++.. ...|++++++.
T Consensus 248 -~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~--~~~l~~~~~~~ 299 (314)
T 1pjx_A 248 -HIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE--NNAVWKFEWQR 299 (314)
T ss_dssp -EEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT--TTEEEEEECSS
T ss_pred -EEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC--CCeEEEEeCCC
Confidence 68888988444 44454444445555 33344434444432 24688888764
No 463
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.14 E-value=0.00041 Score=71.48 Aligned_cols=158 Identities=10% Similarity=0.079 Sum_probs=90.6
Q ss_pred EEEEEECCCCcEEEEeCCCCCC--CCeecCCC----C-CCCceeeecceecC-CCCEEEEEEec-cCCCCCCcceEEEEE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDS--SPLPITPD----Y-GEPLVSYADGIFDP-RFNRYVTVRED-RRQDALNSTTEIVAI 226 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~--~~~~lt~~----~-~~~~~~~~~~~~SP-dG~~l~~~~~~-~~~~~~~~~~~l~~~ 226 (729)
.++++....+.|++++.++ . ....+... . .........++++| +|+ |+ +.+. . ...|+++
T Consensus 103 ~l~v~d~~~~~v~~~~~~g--~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-ly-v~d~~~-------~~~I~~~ 171 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHS--KEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VF-VSDGYC-------NSRIVQF 171 (329)
T ss_dssp CEEEEETTTTEEEEECTTC--SSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EE-EEECSS-------CCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCC--CeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EE-EEeCCC-------CCeEEEE
Confidence 5777776777999999875 4 33333210 0 00112346788999 565 44 4332 1 2579999
Q ss_pred EcCCCceEEeee-CC---------CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCc
Q 004816 227 ALNGQNIQVLVS-GS---------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTI 296 (729)
Q Consensus 227 dl~~g~~~~lt~-~~---------~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~ 296 (729)
+.++...+.+.. +. ....+.+++||+..|+++.. .+..|.+++.+ +|+. +..+......
T Consensus 172 ~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~-------~~~~I~~~~~~-~G~~--~~~~~~~~~~- 240 (329)
T 3fvz_A 172 SPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR-------ENGRIQCFKTD-TKEF--VREIKHASFG- 240 (329)
T ss_dssp CTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET-------TTTEEEEEETT-TCCE--EEEECCTTTT-
T ss_pred cCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC-------CCCEEEEEECC-CCcE--EEEEeccccC-
Confidence 976544444432 21 12456789999777876663 23569999987 6775 3333221101
Q ss_pred cccccCceeCCCCcEEEEEecC-----CCceEEEEEEcCCCeEEEee
Q 004816 297 VESPTEPKWSSKGELFFVTDRK-----NGFWNLHKWIESNNEVLAIY 338 (729)
Q Consensus 297 ~~~~~~~~wspDG~l~~~~~~~-----~g~~~l~~~d~~~g~~~~l~ 338 (729)
.....+.++| | +++..+.. .+...+++++..+++.....
T Consensus 241 -~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 241 -RNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp -TCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred -CCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 2344567888 4 33333320 12347889998888765544
No 464
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.14 E-value=0.00093 Score=65.49 Aligned_cols=207 Identities=11% Similarity=0.057 Sum_probs=116.2
Q ss_pred eeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce-EEee-eCCCeeeeeeeCCCCCeEEEEEecCCCCCCCC
Q 004816 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI-QVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDK 269 (729)
Q Consensus 192 ~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~-~~lt-~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~ 269 (729)
.....+|+||+++|+.+.+.. ..|+.+|++ |++ +.+. .+.....+.++.+||+ ++ ++..+ .
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~--------~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-~~-vs~E~------~ 90 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKP--------AAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-FV-ISDER------D 90 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETT--------EEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-EE-EEETT------T
T ss_pred CcceeEEeCCCCEEEEEECCC--------CeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-EE-EEECC------C
Confidence 468889999999988877753 679999998 554 4443 3445567889998886 33 33222 2
Q ss_pred cEEEEEEecCCCCeeeeEEec-C---CCCCccccccCceeCCCCc-EEEEEecCCCceEEEEEE--cCCCeEEEeeccCc
Q 004816 270 AELWVGYISENGDVYKRVCVA-G---FDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWI--ESNNEVLAIYSLDA 342 (729)
Q Consensus 270 ~~l~~~d~~~~g~~~~~~~~~-~---~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d--~~~g~~~~l~~~~~ 342 (729)
.+|+++++...+......... . ...+ .....++|+|+++ |+....+ ....||.++ +.+...+.+.. .
T Consensus 91 ~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N--~g~EGLA~d~~~~~L~va~E~--~p~~i~~~~g~~~~~~l~i~~~-~- 164 (255)
T 3qqz_A 91 YAIYVISLTPNSEVKILKKIKIPLQESPTN--CGFEGLAYSRQDHTFWFFKEK--NPIEVYKVNGLLSSNELHISKD-K- 164 (255)
T ss_dssp TEEEEEEECTTCCEEEEEEEECCCSSCCCS--SCCEEEEEETTTTEEEEEEES--SSEEEEEEESTTCSSCCEEEEC-H-
T ss_pred CcEEEEEcCCCCeeeeeeeecccccccccc--CCcceEEEeCCCCEEEEEECc--CCceEEEEcccccCCceeeecc-h-
Confidence 469999887444321111111 1 1111 4567889999987 6665544 456899887 22222222211 0
Q ss_pred cccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEee--ccCC-------cceEEe-eeeCCEEEE
Q 004816 343 EFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL--DIPF-------TDIDNI-TLGNDCLFV 412 (729)
Q Consensus 343 ~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~l--t~~~-------~~v~~~-~~~~~~~~~ 412 (729)
.+...........+.+.| ..+++|+.+.. ...|..+|.++..+..+ ..+. ..-..+ .++++. +|
T Consensus 165 ~~~~~~~~~d~S~l~~dp---~tg~lliLS~~--s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-ly 238 (255)
T 3qqz_A 165 ALQRQFTLDDVSGAEFNQ---QKNTLLVLSHE--SRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IY 238 (255)
T ss_dssp HHHHTCCSSCCCEEEEET---TTTEEEEEETT--TTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EE
T ss_pred hhccccccCCceeEEEcC---CCCeEEEEECC--CCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EE
Confidence 000000111234455554 56678877753 34677888877644433 3222 123455 334444 55
Q ss_pred EEeCCCCCceEEEEEcCC
Q 004816 413 EGASGVEPSSVAKVTLDD 430 (729)
Q Consensus 413 ~~~~~~~~~~ly~~d~~~ 430 (729)
+.+.++ .+|++...+
T Consensus 239 IvsE~n---~~y~f~~~~ 253 (255)
T 3qqz_A 239 IVSEPN---RFYRFTPQS 253 (255)
T ss_dssp EEETTT---EEEEEEC--
T ss_pred EEcCCc---eEEEEEecC
Confidence 555443 788886544
No 465
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.14 E-value=0.00056 Score=70.45 Aligned_cols=227 Identities=11% Similarity=0.047 Sum_probs=115.4
Q ss_pred CcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCC--ceEEeee----
Q 004816 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ--NIQVLVS---- 238 (729)
Q Consensus 165 ~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g--~~~~lt~---- 238 (729)
+.|+++|.++ ++........ ........+++|||+ | |+.+.. ...|++++.++. ....+..
T Consensus 69 ~~i~~~d~~~--g~~~~~~~~~--~~~~p~gia~d~~g~-l-~v~d~~-------~~~v~~~~~~g~~~~~~~~~~~~~~ 135 (329)
T 3fvz_A 69 DTILVIDPNN--AEILQSSGKN--LFYLPHGLSIDTDGN-Y-WVTDVA-------LHQVFKLDPHSKEGPLLILGRSMQP 135 (329)
T ss_dssp CCEEEECTTT--CCEEEEECTT--TCSSEEEEEECTTSC-E-EEEETT-------TTEEEEECTTCSSCCSEEESBTTBC
T ss_pred CcEEEEECCC--CeEEeccCCC--ccCCceEEEECCCCC-E-EEEECC-------CCEEEEEeCCCCeEEEEEecccCCC
Confidence 3699999886 5543322210 012346788999999 4 444432 257999998865 3444421
Q ss_pred C-----CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEec--CCC----CCccccccCceeCC
Q 004816 239 G-----SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA--GFD----PTIVESPTEPKWSS 307 (729)
Q Consensus 239 ~-----~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~--~~~----~~~~~~~~~~~wsp 307 (729)
+ .....+.+++|++..|+++... ....|++++. +|+. ...+. +.. +.....+..++++|
T Consensus 136 g~~~~~~~~P~~ia~~~~~g~lyv~d~~------~~~~I~~~~~--~g~~--~~~~~~~g~~~~~~~~~~~~p~gia~d~ 205 (329)
T 3fvz_A 136 GSDQNHFCQPTDVAVEPSTGAVFVSDGY------CNSRIVQFSP--SGKF--VTQWGEESSGSSPRPGQFSVPHSLALVP 205 (329)
T ss_dssp CCSTTCCSSEEEEEECTTTCCEEEEECS------SCCEEEEECT--TSCE--EEEECEECCSSSCCTTEESCEEEEEEET
T ss_pred CCCccccCCCcEEEEeCCCCeEEEEeCC------CCCeEEEEcC--CCCE--EEEeccCCCCCCCCCcccCCCcEEEEEC
Confidence 1 1134567999944457666521 2356888884 4654 22221 110 00002245678999
Q ss_pred CCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEE-----CCeEEEEE
Q 004816 308 KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ-----NGRSYLGI 382 (729)
Q Consensus 308 DG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~-----~g~~~ly~ 382 (729)
|+..+|+++. +..+|.++++++|+........ ......+ .+.+. . +.++..... .+...+++
T Consensus 206 ~~g~l~v~d~--~~~~I~~~~~~~G~~~~~~~~~-~~~~~~~-----~~~~~----p-g~~~~~~g~~~v~~~~~~~v~~ 272 (329)
T 3fvz_A 206 HLDQLCVADR--ENGRIQCFKTDTKEFVREIKHA-SFGRNVF-----AISYI----P-GFLFAVNGKPYFGDQEPVQGFV 272 (329)
T ss_dssp TTTEEEEEET--TTTEEEEEETTTCCEEEEECCT-TTTTCEE-----EEEEE----T-TEEEEEECCCCTTCSCCCCEEE
T ss_pred CCCEEEEEEC--CCCEEEEEECCCCcEEEEEecc-ccCCCcc-----eeeec----C-CEEEEeCCCEEeccCCCcEEEE
Confidence 9443444444 4467889999866654333111 1111111 12222 2 233322211 12346788
Q ss_pred EECCCCceEeec----cCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCC
Q 004816 383 LDDFGHSLSLLD----IPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDD 430 (729)
Q Consensus 383 ~d~~~g~~~~lt----~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~ 430 (729)
++..+++....- ........+ ..+++.+++. ...+ ..|+++++++
T Consensus 273 ~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyva-d~~~--~~I~~~~~~~ 322 (329)
T 3fvz_A 273 MNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIG-DAHT--NTVWKFTLTE 322 (329)
T ss_dssp EETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEE-ESSS--CCEEEEEEEE
T ss_pred EEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEE-ECCC--CEEEEEeCCc
Confidence 887777655432 223334555 3444544443 3222 2566666554
No 466
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.12 E-value=7.5e-05 Score=77.71 Aligned_cols=279 Identities=10% Similarity=-0.015 Sum_probs=140.8
Q ss_pred CCccCceEEcC-C--CcEEEEeecCCCCCceEEEEcCCCCCCCCc-ccCCCCCcccccccccCCceEEEECC-EEEEEEC
Q 004816 88 SKRLGGTAVDG-H--GRLIWLESRPTEAGRGVLVKEPAKAGDEPS-DITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNY 162 (729)
Q Consensus 88 ~~~~~~~~~~p-g--~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~ 162 (729)
...+..+.|+| + +.+..+.. .+|...+|..... +... ..+. .+........++.+ ..+++..
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~---~dg~i~iw~~~~~--~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGS---WANDVRCWEVQDS--GQTIPKAQQ--------MHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEE---TTSEEEEEEECTT--SCEEEEEEE--------ECSSCEEEEEECTTSSEEEEEE
T ss_pred CCceEEEEEcCCCCCceEEEEEC---CCCcEEEEEcCCC--CceeEEEec--------cccCCEEEEEECcCCCEEEEEc
Confidence 34568899998 5 56666654 4577788877543 1221 1111 01222334445433 4455666
Q ss_pred CCCcEEEEeCCCCCCCCeecCCCCCCCceeeeccee--cCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeeeCC
Q 004816 163 KDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIF--DPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVSGS 240 (729)
Q Consensus 163 ~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~--SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~~~ 240 (729)
.++.|.+||+.+ ++...+... ...+....| +|+|+.|+....+ ..|.++|+.+++........
T Consensus 106 ~dg~v~iwd~~~--~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~~d---------g~i~vwd~~~~~~~~~~~~~ 170 (368)
T 3mmy_A 106 CDKTAKMWDLSS--NQAIQIAQH----DAPVKTIHWIKAPNYSCVMTGSWD---------KTLKFWDTRSSNPMMVLQLP 170 (368)
T ss_dssp TTSEEEEEETTT--TEEEEEEEC----SSCEEEEEEEECSSCEEEEEEETT---------SEEEEECSSCSSCSEEEECS
T ss_pred CCCcEEEEEcCC--CCceeeccc----cCceEEEEEEeCCCCCEEEEccCC---------CcEEEEECCCCcEEEEEecC
Confidence 788999999987 655554443 345677888 9999987666543 46999999887654444433
Q ss_pred CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCC--c--EEEEEe
Q 004816 241 DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG--E--LFFVTD 316 (729)
Q Consensus 241 ~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG--~--l~~~~~ 316 (729)
.......++ +..++... . ...+.++++. .... ......... . .......+.+++ . .++...
T Consensus 171 ~~~~~~~~~--~~~~~~~~-~-------~~~i~~~~~~-~~~~-~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~ 235 (368)
T 3mmy_A 171 ERCYCADVI--YPMAVVAT-A-------ERGLIVYQLE-NQPS-EFRRIESPL-K--HQHRCVAIFKDKQNKPTGFALGS 235 (368)
T ss_dssp SCEEEEEEE--TTEEEEEE-G-------GGCEEEEECS-SSCE-EEEECCCSC-S--SCEEEEEEEECTTSCEEEEEEEE
T ss_pred CCceEEEec--CCeeEEEe-C-------CCcEEEEEec-cccc-hhhhccccc-c--CCCceEEEcccCCCCCCeEEEec
Confidence 333333444 34555444 2 2348888887 4432 122221111 0 111122222222 1 244443
Q ss_pred cCCCceEEEEEEcCCCeE----EEeeccCccc---cCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCc
Q 004816 317 RKNGFWNLHKWIESNNEV----LAIYSLDAEF---SRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 389 (729)
Q Consensus 317 ~~~g~~~l~~~d~~~g~~----~~l~~~~~~~---~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~ 389 (729)
. .+. |.+++...... ..+....... ....-......+.|.+ +++ ++++...+|...|| |+.+++
T Consensus 236 ~-dg~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp---~~~-~l~s~~~dg~i~iw--d~~~~~ 306 (368)
T 3mmy_A 236 I-EGR--VAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP---VHG-TLATVGSDGRFSFW--DKDART 306 (368)
T ss_dssp T-TSE--EEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT---TTC-CEEEEETTSCEEEE--ETTTTE
T ss_pred C-CCc--EEEEecCCCCccccceeeeeeecccccccccccccceEEEEEec---CCC-EEEEEccCCeEEEE--ECCCCc
Confidence 3 344 44445544421 1221111000 0000000122344442 444 45566667765555 676665
Q ss_pred e-EeeccCCcceEEe-eeeCCEEEEEEeCCC
Q 004816 390 L-SLLDIPFTDIDNI-TLGNDCLFVEGASGV 418 (729)
Q Consensus 390 ~-~~lt~~~~~v~~~-~~~~~~~~~~~~~~~ 418 (729)
. ..+......+..+ ..+++.+++.++..+
T Consensus 307 ~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 307 KLKTSEQLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp EEEECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred EEEEecCCCCCceEEEECCCCCeEEEEeccc
Confidence 4 4444445667777 455566666666543
No 467
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=98.11 E-value=7.4e-06 Score=87.00 Aligned_cols=109 Identities=10% Similarity=-0.038 Sum_probs=65.1
Q ss_pred CCCEEEEEcCCCCCC------ccccch----hhhHHHhhCCcEEEEecCCCCCCCchhHHHh------hccCCCc-----
Q 004816 491 KPPLLVKSHGGPTSE------ARGILN----LSIQYWTSRGWAFVDVNYGGSTGYGREFRER------LLGRWGI----- 549 (729)
Q Consensus 491 ~~P~vv~~hGg~~~~------~~~~~~----~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~------~~~~~~~----- 549 (729)
..|.||++||..+.. ....|. ...+.|.++||.|+++|++|.+......... ..++.+.
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~ 130 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEK 130 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccccc
Confidence 345688999975431 123443 4778888999999999999754321110000 0000000
Q ss_pred ----ccHHHHHHHHHHHHhCCCCC-CCcEEEEEcChHHHHHHHHHh---------------------------CCCcceE
Q 004816 550 ----VDVNDCCSCATFLVGSGKAD-EKRLCITGGSAGGYTTLAALA---------------------------FRDTFKA 597 (729)
Q Consensus 550 ----~~~~D~~~~~~~l~~~~~~d-~~ri~i~G~S~GG~~a~~~~~---------------------------~~~~~~a 597 (729)
...+|+.++++ . +. .+++.|+||||||.++..++. +|++++.
T Consensus 131 ~~~~~~a~dl~~ll~----~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~s 204 (431)
T 2hih_A 131 YGHERYGKTYEGVLK----D--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTS 204 (431)
T ss_dssp HTCCSEEEEECCSCT----T--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEE
T ss_pred CCHHHHHHHHHHHHH----H--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeE
Confidence 00111111111 1 11 378999999999999988764 4788999
Q ss_pred EEEecccc
Q 004816 598 GASLYGVA 605 (729)
Q Consensus 598 ~v~~~~~~ 605 (729)
+|++++..
T Consensus 205 lv~i~tP~ 212 (431)
T 2hih_A 205 ITTIATPH 212 (431)
T ss_dssp EEEESCCT
T ss_pred EEEECCCC
Confidence 99998753
No 468
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.11 E-value=0.0017 Score=65.15 Aligned_cols=274 Identities=10% Similarity=0.033 Sum_probs=141.3
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC-CEEEEEECCCCcE
Q 004816 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG-DTVIFSNYKDQRL 167 (729)
Q Consensus 89 ~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~l 167 (729)
..+.++.+++.+.+|+... ..++ |.+++.. ++...+.... . ......+..+. +.+++.....+.|
T Consensus 20 ~~p~~i~~d~~g~l~v~~~---~~~~--v~~~~~~--~~~~~~~~~~-~------~~~~~~i~~~~~g~l~v~~~~~~~v 85 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQH---KANK--ISSLDQS--GRIKEFEVPT-P------DAKVMCLIVSSLGDIWFTENGANKI 85 (300)
T ss_dssp CCEEEEEECTTSCEEEEET---TTTE--EEEECTT--SCEEEEECSS-T------TCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCcceeeECCCCCEEEEcC---CCCe--EEEECCC--CceEEEECCC-C------CCcceeEEECCCCCEEEEecCCCeE
Confidence 3566788887556777653 1233 5555544 2332221110 0 00112334443 3566665556789
Q ss_pred EEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee--CCCeeee
Q 004816 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS--GSDFYAF 245 (729)
Q Consensus 168 ~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~--~~~~~~~ 245 (729)
++++.++ . .+.+.... .........++|+|+. ++. ... ...|++++.+ ++.+.+.. ......+
T Consensus 86 ~~~d~~g--~-~~~~~~~~--~~~~~~~i~~~~~g~l-~v~-~~~-------~~~i~~~~~~-g~~~~~~~~~~~~~~~~ 150 (300)
T 2qc5_A 86 GKLSKKG--G-FTEYPLPQ--PDSGPYGITEGLNGDI-WFT-QLN-------GDRIGKLTAD-GTIYEYDLPNKGSYPAF 150 (300)
T ss_dssp EEECTTS--C-EEEEECSS--TTCCEEEEEECSTTCE-EEE-ETT-------TTEEEEECTT-SCEEEEECSSTTCCEEE
T ss_pred EEECCCC--C-eEEecCCC--CCCCCccceECCCCCE-EEE-ccC-------CCeEEEECCC-CCEEEccCCCCCCCcee
Confidence 9999873 3 33332210 0234567788999983 333 321 1469999988 66654432 2334566
Q ss_pred eeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEE
Q 004816 246 PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLH 325 (729)
Q Consensus 246 ~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~ 325 (729)
..++|||+ |++... ....|++++.+ ++.... ...... ..+..+.+++||++++.... ...|+
T Consensus 151 i~~d~~g~-l~v~~~-------~~~~i~~~~~~--g~~~~~-~~~~~~----~~~~~i~~d~~g~l~v~~~~---~~~i~ 212 (300)
T 2qc5_A 151 ITLGSDNA-LWFTEN-------QNNSIGRITNT--GKLEEY-PLPTNA----AAPVGITSGNDGALWFVEIM---GNKIG 212 (300)
T ss_dssp EEECTTSS-EEEEET-------TTTEEEEECTT--CCEEEE-ECSSTT----CCEEEEEECTTSSEEEEETT---TTEEE
T ss_pred EEECCCCC-EEEEec-------CCCeEEEECCC--CcEEEe-eCCCCC----CCcceEEECCCCCEEEEccC---CCEEE
Confidence 78999998 655542 13458888863 554321 122221 34456778899877665433 34688
Q ss_pred EEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEeeccC--CcceEEe
Q 004816 326 KWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIP--FTDIDNI 403 (729)
Q Consensus 326 ~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~lt~~--~~~v~~~ 403 (729)
++++ +++...+.... .... ...+.+. .++.+++... +...|++++.+ ++.+.+..+ ...+..+
T Consensus 213 ~~~~-~g~~~~~~~~~-~~~~------~~~i~~d----~~g~l~v~~~--~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i 277 (300)
T 2qc5_A 213 RITT-TGEISEYDIPT-PNAR------PHAITAG----KNSEIWFTEW--GANQIGRITND-NTIQEYQLQTENAEPHGI 277 (300)
T ss_dssp EECT-TCCEEEEECSS-TTCC------EEEEEEC----STTCEEEEET--TTTEEEEECTT-SCEEEEECCSTTCCCCCE
T ss_pred EEcC-CCcEEEEECCC-CCCC------ceEEEEC----CCCCEEEecc--CCCeEEEECCC-CcEEEEECCccCCcccee
Confidence 8988 55554442110 1111 1123332 3345665542 33468888884 555544332 2334444
Q ss_pred e-eeCCEEEEEEeCCCCCceEEEEEcC
Q 004816 404 T-LGNDCLFVEGASGVEPSSVAKVTLD 429 (729)
Q Consensus 404 ~-~~~~~~~~~~~~~~~~~~ly~~d~~ 429 (729)
. ..++.+ +++.. . .+++++++
T Consensus 278 ~~~~~g~l-~v~~~--~--~i~~~~p~ 299 (300)
T 2qc5_A 278 TFGKDGSV-WFALK--C--KIGKLNLN 299 (300)
T ss_dssp EECTTSCE-EEECS--S--EEEEEEEC
T ss_pred EeCCCCCE-EEEcc--C--ceEEeCCC
Confidence 2 333443 33332 2 67776653
No 469
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.10 E-value=0.00027 Score=79.42 Aligned_cols=207 Identities=13% Similarity=0.092 Sum_probs=129.6
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEE
Q 004816 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (729)
Q Consensus 90 ~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~ 168 (729)
.+.++.+++ ++.|||.+.. .+ .|++.+.+++ ....++..+ +....+.++.+.++.|++++...+.|.
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~---~~--~I~r~~~~g~-~~~~v~~~~------~~~p~GlAvD~~~~~lY~tD~~~~~I~ 417 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDE---VR--AIRRSFIDGS-GSQFVVTAQ------IAHPDGIAVDWVARNLYWTDTGTDRIE 417 (619)
T ss_dssp SEEEEEEETTTTEEEEEETT---TT--EEEEEETTSC-SCEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred ccEEEEEEcCCCeEEEEeCC---CC--eEEEEEcCCC-ccEEEEECC------CCCcCceEEecccCcEEEEeCCCCcEE
Confidence 345677898 8999999863 23 4777776632 333333222 112234445555788999988888999
Q ss_pred EEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee-CCCeeeeee
Q 004816 169 KHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS-GSDFYAFPR 247 (729)
Q Consensus 169 ~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~-~~~~~~~~~ 247 (729)
+.++++ ...+.|.... -....++++.|....|+++.... ...|++.++++...+.|.. ....-++.+
T Consensus 418 v~~~~G--~~~~~l~~~~---l~~P~~iavdp~~G~ly~tD~g~-------~~~I~r~~~dG~~~~~l~~~~l~~P~Gla 485 (619)
T 3s94_A 418 VTRLNG--TMRKILISED---LEEPRAIVLDPMVGYMYWTDWGE-------IPKIERAALDGSDRVVLVNTSLGWPNGLA 485 (619)
T ss_dssp EEETTS--CSCEEEECTT---CCSEEEEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEeCCC--CeEEEEEECC---CCCeeeEEEEcCCCcEEEecCCC-------CCEEEEEccCCCccEEEEeCCCCCCeeeE
Confidence 999987 5555554321 23447888999877777664322 2579999999876666654 345667889
Q ss_pred eCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEE
Q 004816 248 MDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKW 327 (729)
Q Consensus 248 ~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~ 327 (729)
.++++++|||+... ...|+.++++ +... ..+..+.- .....++...| .|| .++. +...|+++
T Consensus 486 lD~~~~~LY~aD~~-------~~~I~~~~~d-G~~~--~~~~~~~l----~~P~glav~~~-~ly-~tD~--~~~~I~~~ 547 (619)
T 3s94_A 486 LDYDEGKIYWGDAK-------TDKIEVMNTD-GTGR--RVLVEDKI----PHIFGFTLLGD-YVY-WTDW--QRRSIERV 547 (619)
T ss_dssp EETTTTEEEEEETT-------TTEEEEEESS-SCCC--EEEEECCC----CSSCCEEEETT-EEE-EECT--TSSCEEEE
T ss_pred EcccCCEEEEEECC-------CCEEEEEecC-CCce--EEEeccCC----CCcEEEEEECC-EEE-Eeec--CCCeEEEE
Confidence 99999999988732 3469999987 3322 22333221 23334444322 244 4444 45678888
Q ss_pred EcCCCeEEEee
Q 004816 328 IESNNEVLAIY 338 (729)
Q Consensus 328 d~~~g~~~~l~ 338 (729)
|..+|..+.+.
T Consensus 548 ~k~~g~~~~~~ 558 (619)
T 3s94_A 548 HKRSAEREVII 558 (619)
T ss_dssp ESSSCCEEEEE
T ss_pred EcCCCceEEEe
Confidence 88887554443
No 470
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.10 E-value=9.3e-05 Score=72.21 Aligned_cols=157 Identities=8% Similarity=-0.108 Sum_probs=95.2
Q ss_pred EEEECCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcC
Q 004816 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (729)
Q Consensus 150 ~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~ 229 (729)
+.++++.++.+...+++|.++|++++ ...+.+ -. . ++..--+.++|++|+..... ...++++|++
T Consensus 60 L~~~~~~Ly~stG~~g~v~~iD~~Tg-kv~~~~-l~----~-~~FgeGit~~g~~Ly~ltw~--------~~~v~V~D~~ 124 (268)
T 3nok_A 60 LVFHQGHFFESTGHQGTLRQLSLESA-QPVWME-RL----G-NIFAEGLASDGERLYQLTWT--------EGLLFTWSGM 124 (268)
T ss_dssp EEEETTEEEEEETTTTEEEECCSSCS-SCSEEE-EC----T-TCCEEEEEECSSCEEEEESS--------SCEEEEEETT
T ss_pred EEEECCEEEEEcCCCCEEEEEECCCC-cEEeEE-CC----C-CcceeEEEEeCCEEEEEEcc--------CCEEEEEECC
Confidence 45568888888888889999999983 333444 22 1 11111256688887665443 2679999999
Q ss_pred CCceE-EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCC
Q 004816 230 GQNIQ-VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK 308 (729)
Q Consensus 230 ~g~~~-~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspD 308 (729)
+.+.. ++.... .+...++||++|+... . ..+|+++|.+ +.+........... .-...+..+.|. |
T Consensus 125 Tl~~~~ti~~~~---eGwGLt~Dg~~L~vSd--G------s~~l~~iDp~-T~~v~~~I~V~~~g-~~v~~lNeLe~~-d 190 (268)
T 3nok_A 125 PPQRERTTRYSG---EGWGLCYWNGKLVRSD--G------GTMLTFHEPD-GFALVGAVQVKLRG-QPVELINELECA-N 190 (268)
T ss_dssp TTEEEEEEECSS---CCCCEEEETTEEEEEC--S------SSEEEEECTT-TCCEEEEEECEETT-EECCCEEEEEEE-T
T ss_pred cCcEEEEEeCCC---ceeEEecCCCEEEEEC--C------CCEEEEEcCC-CCeEEEEEEeCCCC-cccccccccEEe-C
Confidence 87654 443221 2344568999876443 2 3469999988 66643322222221 000123445676 7
Q ss_pred CcEEEEEecCCCceEEEEEEcCCCeEEEee
Q 004816 309 GELFFVTDRKNGFWNLHKWIESNNEVLAIY 338 (729)
Q Consensus 309 G~l~~~~~~~~g~~~l~~~d~~~g~~~~l~ 338 (729)
|+|| .... ....|.++|+++|++....
T Consensus 191 G~ly-anvw--~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 191 GVIY-ANIW--HSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp TEEE-EEET--TCSEEEEECTTTCBEEEEE
T ss_pred CEEE-EEEC--CCCeEEEEeCCCCcEEEEE
Confidence 8755 4433 2358999999999877655
No 471
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.09 E-value=9.4e-05 Score=73.05 Aligned_cols=200 Identities=11% Similarity=-0.112 Sum_probs=108.3
Q ss_pred EEEC-CEEEEEECC--CCcEEEEeCCCCCCCCee-cCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEE
Q 004816 151 RIFG-DTVIFSNYK--DQRLYKHSIDSKDSSPLP-ITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (729)
Q Consensus 151 ~~~~-~~i~~~~~~--~~~l~~~d~~~~~~~~~~-lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~ 226 (729)
.+++ +.++.+... .+.|.++|+.+ ++..+ +.-.. . .....+.++|++|+...+.. ..++++
T Consensus 27 ~~~~dg~Lyvstg~~~~s~v~~iD~~t--g~v~~~i~l~~----~-~fgeGi~~~g~~lyv~t~~~--------~~v~vi 91 (266)
T 2iwa_A 27 VYAENDTLFESTGLYGRSSVRQVALQT--GKVENIHKMDD----S-YFGEGLTLLNEKLYQVVWLK--------NIGFIY 91 (266)
T ss_dssp EECSTTEEEEEECSTTTCEEEEEETTT--CCEEEEEECCT----T-CCEEEEEEETTEEEEEETTC--------SEEEEE
T ss_pred EEeCCCeEEEECCCCCCCEEEEEECCC--CCEEEEEecCC----C-cceEEEEEeCCEEEEEEecC--------CEEEEE
Confidence 3444 455555543 46899999998 65433 22221 1 11112455688866665432 679999
Q ss_pred EcCCCceE-EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCcee
Q 004816 227 ALNGQNIQ-VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 305 (729)
Q Consensus 227 dl~~g~~~-~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~w 305 (729)
|.++.+.. ++..+ .-.+...++||++|+. + +. ...|+++|.+ +.+........... .-...+..+.|
T Consensus 92 D~~t~~v~~~i~~g--~~~g~glt~Dg~~l~v-s-~g------s~~l~viD~~-t~~v~~~I~Vg~~~-~p~~~~nele~ 159 (266)
T 2iwa_A 92 DRRTLSNIKNFTHQ--MKDGWGLATDGKILYG-S-DG------TSILYEIDPH-TFKLIKKHNVKYNG-HRVIRLNELEY 159 (266)
T ss_dssp ETTTTEEEEEEECC--SSSCCEEEECSSSEEE-E-CS------SSEEEEECTT-TCCEEEEEECEETT-EECCCEEEEEE
T ss_pred ECCCCcEEEEEECC--CCCeEEEEECCCEEEE-E-CC------CCeEEEEECC-CCcEEEEEEECCCC-cccccceeEEE
Confidence 99987654 44333 1123457889998864 4 22 2469999988 55542222221111 00012345677
Q ss_pred CCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCcc------ccCCcccccCcceeeeeecCCCCEEEEEEEECCeEE
Q 004816 306 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAE------FSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSY 379 (729)
Q Consensus 306 spDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~------~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ 379 (729)
. ||++| .... ....|.++|++++++....+...- ...+. ....+.+.+.+ +++++|++. ....+
T Consensus 160 ~-dg~ly-vn~~--~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~-~~v~nGIa~~~---~~~~lfVTg--k~~~~ 229 (266)
T 2iwa_A 160 I-NGEVW-ANIW--QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRD-IDVLNGIAWDQ---ENKRIFVTG--KLWPK 229 (266)
T ss_dssp E-TTEEE-EEET--TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTT-CCCEEEEEEET---TTTEEEEEE--TTCSE
T ss_pred E-CCEEE-EecC--CCCeEEEEECCCCcEEEEEECCCcccccccccccc-cCceEEEEEcC---CCCEEEEEC--CCCCe
Confidence 7 77655 4443 245899999999987654422100 00000 00123455553 667777665 34556
Q ss_pred EEEEECCC
Q 004816 380 LGILDDFG 387 (729)
Q Consensus 380 ly~~d~~~ 387 (729)
||.+++..
T Consensus 230 v~~i~l~~ 237 (266)
T 2iwa_A 230 LFEIKLHL 237 (266)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 77776543
No 472
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.08 E-value=0.00015 Score=79.10 Aligned_cols=165 Identities=10% Similarity=-0.005 Sum_probs=94.5
Q ss_pred CCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeeccee-c-CCCCEEEEEEecc------C---CCCCCcceE
Q 004816 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIF-D-PRFNRYVTVREDR------R---QDALNSTTE 222 (729)
Q Consensus 154 ~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~-S-PdG~~l~~~~~~~------~---~~~~~~~~~ 222 (729)
+..++..+..+++|.++|+++ .+..++...+.. .....+++ + |||++|++..+.. + ..++++...
T Consensus 101 G~~lfVnd~~~~rVavIdl~t--~~~~~ii~ip~g--~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDV--MKCDAILEIPNA--KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTT--TEEEEEEECSSC--CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCC--ceEeeEEeCCCC--CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 334555444566899999998 664443322111 12234454 5 9999975553211 0 123455678
Q ss_pred EEEEEcCCCceE-EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCC-------C-----------------------CcE
Q 004816 223 IVAIALNGQNIQ-VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPW-------D-----------------------KAE 271 (729)
Q Consensus 223 l~~~dl~~g~~~-~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~-------~-----------------------~~~ 271 (729)
+-++|.++.++. ++.-+. ...+...||||++++.++.+.....+ . -..
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 999999987653 443332 45667899999988777643311000 0 012
Q ss_pred EEEEEecCC--CCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCCC
Q 004816 272 LWVGYISEN--GDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNN 332 (729)
Q Consensus 272 l~~~d~~~~--g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g 332 (729)
+-++|.. + ++.. ...++-. .....+.+||||+.+|+++. +...+.++|.++.
T Consensus 256 V~VID~~-~~~~~~~-~~~Ipvg-----~~PhGv~~sPDGk~v~V~~~--~s~~VsVid~~~~ 309 (595)
T 1fwx_A 256 VKVVDGR-KEASSLF-TRYIPIA-----NNPHGCNMAPDKKHLCVAGK--LSPTVTVLDVTRF 309 (595)
T ss_dssp EEEEECS-GGGCCSS-EEEEEEE-----SSCCCEEECTTSSEEEEECT--TSSBEEEEEGGGH
T ss_pred EEEEeCc-ccCCcee-EEEEecC-----CCceEEEEcCCCCEEEEeCC--CCCeEEEEECccc
Confidence 5666665 3 2210 1111111 23467899999997777765 5567888888754
No 473
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.00045 Score=74.08 Aligned_cols=151 Identities=5% Similarity=0.014 Sum_probs=91.1
Q ss_pred CCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce
Q 004816 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (729)
Q Consensus 154 ~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~ 233 (729)
++.|++.+.. +.|+++++++ +..+.+... ......++|+++|++|+++....... ...++.++.+++-.
T Consensus 149 ~g~Lyv~d~~-~~I~~id~~~--~~v~~~~~~----~~~P~~ia~d~~G~~lyvad~~~~~~----~~~v~~~~~~g~~~ 217 (430)
T 3tc9_A 149 HNHLYLVGEQ-HPTRLIDFEK--EYVSTVYSG----LSKVRTICWTHEADSMIITNDQNNND----RPNNYILTRESGFK 217 (430)
T ss_dssp EEEEEEEEBT-EEEEEEETTT--TEEEEEECC----CSCEEEEEECTTSSEEEEEECCSCTT----SEEEEEEEGGGTSC
T ss_pred CCeEEEEeCC-CcEEEEECCC--CEEEEEecC----CCCcceEEEeCCCCEEEEEeCCCCcc----cceEEEEeCCCcee
Confidence 3466666554 7899999987 666665443 24457889999999765554322111 24577777765432
Q ss_pred --EEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcE
Q 004816 234 --QVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGEL 311 (729)
Q Consensus 234 --~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l 311 (729)
+.+.. .....+.+++|++.+|++..+ ...+|++++.+ ++... .+..... . .....++|+|||+.
T Consensus 218 ~~~~l~~-~~~p~giavdp~~g~lyv~d~-------~~~~V~~~~~~-~~~~~--~~~~~~~-~--~~P~gia~~pdG~~ 283 (430)
T 3tc9_A 218 VITELTK-GQNCNGAETHPINGELYFNSW-------NAGQVFRYDFT-TQETT--PLFTIQD-S--GWEFHIQFHPSGNY 283 (430)
T ss_dssp SEEEEEE-CSSCCCEEECTTTCCEEEEET-------TTTEEEEEETT-TTEEE--EEEECSS-S--SCCEEEEECTTSSE
T ss_pred eeeeecc-CCCceEEEEeCCCCEEEEEEC-------CCCEEEEEECC-CCcEE--EEEEcCC-C--CcceeEEEcCCCCE
Confidence 33332 233456789996556877763 23569999987 55432 2221111 0 23457899999994
Q ss_pred EEEEecCCCceEEEEEEcCC
Q 004816 312 FFVTDRKNGFWNLHKWIESN 331 (729)
Q Consensus 312 ~~~~~~~~g~~~l~~~d~~~ 331 (729)
+|.++. ...+|++++.++
T Consensus 284 lyv~d~--~~~~I~~~~~d~ 301 (430)
T 3tc9_A 284 AYIVVV--NQHYILRSDYDW 301 (430)
T ss_dssp EEEEET--TTTEEEEEEEET
T ss_pred EEEEEC--CCCEEEEEeCCc
Confidence 444443 446788877654
No 474
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.06 E-value=0.00027 Score=68.93 Aligned_cols=196 Identities=11% Similarity=0.066 Sum_probs=117.2
Q ss_pred CceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEEEEe
Q 004816 92 GGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKHS 171 (729)
Q Consensus 92 ~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~d 171 (729)
.++.++ ++.+|.... ..|+..|..++..+ |+...-.+.+ ..+-+..+.+.+++|+.....++.++++|
T Consensus 46 qGL~~~-~~~LyestG---~~g~S~v~~vD~~T-gkv~~~~~l~-------~~~FgeGit~~g~~ly~ltw~~~~v~v~D 113 (262)
T 3nol_A 46 EGFFYR-NGYFYESTG---LNGRSSIRKVDIES-GKTLQQIELG-------KRYFGEGISDWKDKIVGLTWKNGLGFVWN 113 (262)
T ss_dssp EEEEEE-TTEEEEEEE---ETTEEEEEEECTTT-CCEEEEEECC-------TTCCEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred ceEEEE-CCEEEEECC---CCCCceEEEEECCC-CcEEEEEecC-------CccceeEEEEeCCEEEEEEeeCCEEEEEE
Confidence 688888 777777654 34566777788773 3432222111 11223346678899999988889999999
Q ss_pred CCCCCCC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE-Eee--eCC---Ceee
Q 004816 172 IDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-VLV--SGS---DFYA 244 (729)
Q Consensus 172 ~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~-~lt--~~~---~~~~ 244 (729)
+++ .+ ..++.... ....+++||++|+.+ +. ...|+.+|.++.++. .+. .+. ...+
T Consensus 114 ~~t--~~~~~ti~~~~-------eG~glt~dg~~L~~S-dG--------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lN 175 (262)
T 3nol_A 114 IRN--LRQVRSFNYDG-------EGWGLTHNDQYLIMS-DG--------TPVLRFLDPESLTPVRTITVTAHGEELPELN 175 (262)
T ss_dssp TTT--CCEEEEEECSS-------CCCCEEECSSCEEEC-CS--------SSEEEEECTTTCSEEEEEECEETTEECCCEE
T ss_pred Ccc--CcEEEEEECCC-------CceEEecCCCEEEEE-CC--------CCeEEEEcCCCCeEEEEEEeccCCccccccc
Confidence 987 43 33444321 223466789875444 32 157999999987654 332 221 2223
Q ss_pred eeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCC------CccccccCceeCCCCcEEEEEecC
Q 004816 245 FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDP------TIVESPTEPKWSSKGELFFVTDRK 318 (729)
Q Consensus 245 ~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~------~~~~~~~~~~wspDG~l~~~~~~~ 318 (729)
...|. ||+ |+... |....|.++|.+ +|++....-+.+..+ .-......++|+|+++.+|++..
T Consensus 176 ELe~~-~G~-lyan~-------w~~~~I~vIDp~-tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK- 244 (262)
T 3nol_A 176 ELEWV-DGE-IFANV-------WQTNKIVRIDPE-TGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK- 244 (262)
T ss_dssp EEEEE-TTE-EEEEE-------TTSSEEEEECTT-TCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET-
T ss_pred eeEEE-CCE-EEEEE-------ccCCeEEEEECC-CCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC-
Confidence 45676 774 65433 234579999998 888644433322110 00023467899999885555544
Q ss_pred CCceEEEEEEc
Q 004816 319 NGFWNLHKWIE 329 (729)
Q Consensus 319 ~g~~~l~~~d~ 329 (729)
.|..||.+.+
T Consensus 245 -~Wp~~~ev~~ 254 (262)
T 3nol_A 245 -LWPKVFEITL 254 (262)
T ss_dssp -TCSEEEEEEE
T ss_pred -CCCceEEEEE
Confidence 5777887654
No 475
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.03 E-value=0.0028 Score=68.07 Aligned_cols=231 Identities=11% Similarity=0.074 Sum_probs=127.2
Q ss_pred CceEEEECCEEEEEECCCCcEEEEeCCCCCCCCe-ecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEE
Q 004816 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (729)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~~-~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~ 225 (729)
..++.++++.+ ++...++.|.+||+.+ ++.. .+... ...+....| ||+.++....+ ..|.+
T Consensus 202 v~~~~~~~~~l-~s~s~dg~i~~wd~~~--~~~~~~~~~~----~~~v~~~~~--~~~~l~~~~~d---------g~i~i 263 (445)
T 2ovr_B 202 VRCMHLHEKRV-VSGSRDATLRVWDIET--GQCLHVLMGH----VAAVRCVQY--DGRRVVSGAYD---------FMVKV 263 (445)
T ss_dssp EEEEEEETTEE-EEEETTSEEEEEESSS--CCEEEEEECC----SSCEEEEEE--CSSCEEEEETT---------SCEEE
T ss_pred EEEEEecCCEE-EEEeCCCEEEEEECCC--CcEEEEEcCC----cccEEEEEE--CCCEEEEEcCC---------CEEEE
Confidence 44566666664 4455678999999987 5433 33332 233444455 78876665543 45888
Q ss_pred EEcCCCceEE-eeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCce
Q 004816 226 IALNGQNIQV-LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 304 (729)
Q Consensus 226 ~dl~~g~~~~-lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 304 (729)
+|+.+++... +...........| ||++|+..+. ...|.++|+. +++. ...+.+.. ..+..
T Consensus 264 wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~--------d~~i~i~d~~-~~~~--~~~~~~~~----~~v~~-- 324 (445)
T 2ovr_B 264 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL--------DTSIRVWDVE-TGNC--IHTLTGHQ----SLTSG-- 324 (445)
T ss_dssp EEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEET--------TSCEEEEETT-TCCE--EEEECCCC----SCEEE--
T ss_pred EECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeC--------CCeEEEEECC-CCCE--EEEEcCCc----ccEEE--
Confidence 9998876543 3323344555666 8888876652 2349999998 6664 33444443 22333
Q ss_pred eCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEE
Q 004816 305 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 384 (729)
Q Consensus 305 wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d 384 (729)
+++++++++.... .+ .|.++|+.+++.............+. ..+.| +++ ++++...+|...|| +
T Consensus 325 ~~~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~v-----~~~~~-----~~~-~l~s~~~dg~v~iw--d 388 (445)
T 2ovr_B 325 MELKDNILVSGNA-DS--TVKIWDIKTGQCLQTLQGPNKHQSAV-----TCLQF-----NKN-FVITSSDDGTVKLW--D 388 (445)
T ss_dssp EEEETTEEEEEET-TS--CEEEEETTTCCEEEEECSTTSCSSCE-----EEEEE-----CSS-EEEEEETTSEEEEE--E
T ss_pred EEEeCCEEEEEeC-CC--eEEEEECCCCcEEEEEccCCCCCCCE-----EEEEE-----CCC-EEEEEeCCCeEEEE--E
Confidence 3446665555444 34 46667887776544332211111111 12233 333 55566667766665 6
Q ss_pred CCCCce-Eeec-----cCCcceEEe-eeeCCEEEEEEeCCCC-CceEEEEEcCC
Q 004816 385 DFGHSL-SLLD-----IPFTDIDNI-TLGNDCLFVEGASGVE-PSSVAKVTLDD 430 (729)
Q Consensus 385 ~~~g~~-~~lt-----~~~~~v~~~-~~~~~~~~~~~~~~~~-~~~ly~~d~~~ 430 (729)
+.+++. ..+. .....+..+ ..+++.+++.++.... ...++.+|.+.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 389 LKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp TTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 666654 3441 223446666 4455555555554443 44577777653
No 476
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.01 E-value=0.0015 Score=65.44 Aligned_cols=231 Identities=12% Similarity=0.062 Sum_probs=121.3
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCC--CCCceeeeccee-cCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDY--GEPLVSYADGIF-DPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~--~~~~~~~~~~~~-SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~ 232 (729)
.+++....++.|++++.++ ...+.+.... ..........++ +++|+ |+++.... ...|++++.++..
T Consensus 42 ~l~v~~~~~~~i~~~d~~g--~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~~-------~~~i~~~d~~g~~ 111 (286)
T 1q7f_A 42 DIIVADTNNHRIQIFDKEG--RFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERSP-------THQIQIYNQYGQF 111 (286)
T ss_dssp CEEEEEGGGTEEEEECTTS--CEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECGG-------GCEEEEECTTSCE
T ss_pred CEEEEECCCCEEEEECCCC--cEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCCC-------CCEEEEECCCCcE
Confidence 5666655667899999875 5444443210 000123456678 46665 44443211 2569999965444
Q ss_pred eEEeeeC-CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcE
Q 004816 233 IQVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGEL 311 (729)
Q Consensus 233 ~~~lt~~-~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l 311 (729)
.+.+... .....+.+++|||+ |++... ....|++++.+ ++. ...+...... ..+..+++++||++
T Consensus 112 ~~~~~~~~~~~~~~i~~~~~g~-l~v~~~-------~~~~i~~~~~~--g~~--~~~~~~~~~~--~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 112 VRKFGATILQHPRGVTVDNKGR-IIVVEC-------KVMRVIIFDQN--GNV--LHKFGCSKHL--EFPNGVVVNDKQEI 177 (286)
T ss_dssp EEEECTTTCSCEEEEEECTTSC-EEEEET-------TTTEEEEECTT--SCE--EEEEECTTTC--SSEEEEEECSSSEE
T ss_pred EEEecCccCCCceEEEEeCCCC-EEEEEC-------CCCEEEEEcCC--CCE--EEEeCCCCcc--CCcEEEEECCCCCE
Confidence 4444322 23455678999997 655542 23468998854 443 2222211100 34567889999985
Q ss_pred EEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceE
Q 004816 312 FFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 391 (729)
Q Consensus 312 ~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~ 391 (729)
++.. . +...|+++|+++.....+.. ......| ..+.+. .++.+|++...++ ..|.+++.++..++
T Consensus 178 ~v~~-~--~~~~i~~~~~~g~~~~~~~~-~g~~~~p------~~i~~d----~~G~l~v~~~~~~-~~i~~~~~~g~~~~ 242 (286)
T 1q7f_A 178 FISD-N--RAHCVKVFNYEGQYLRQIGG-EGITNYP------IGVGIN----SNGEILIADNHNN-FNLTIFTQDGQLIS 242 (286)
T ss_dssp EEEE-G--GGTEEEEEETTCCEEEEESC-TTTSCSE------EEEEEC----TTCCEEEEECSSS-CEEEEECTTSCEEE
T ss_pred EEEE-C--CCCEEEEEcCCCCEEEEEcc-CCccCCC------cEEEEC----CCCCEEEEeCCCC-EEEEEECCCCCEEE
Confidence 5443 2 34578888986655444432 1111111 233443 3345665543322 26777788776666
Q ss_pred eeccCCc--ceEEe-eeeCCEEEEEEeCCCCCceEEEEEcC
Q 004816 392 LLDIPFT--DIDNI-TLGNDCLFVEGASGVEPSSVAKVTLD 429 (729)
Q Consensus 392 ~lt~~~~--~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~ 429 (729)
.+..... ....+ ..+++.+++. +. + ..+.+++..
T Consensus 243 ~~~~~~~~~~~~~i~~~~~g~l~vs-~~-~--~~v~v~~~~ 279 (286)
T 1q7f_A 243 ALESKVKHAQCFDVALMDDGSVVLA-SK-D--YRLYIYRYV 279 (286)
T ss_dssp EEEESSCCSCEEEEEEETTTEEEEE-ET-T--TEEEEEECS
T ss_pred EEcccCCCCcceeEEECCCCcEEEE-CC-C--CeEEEEEcc
Confidence 6654322 23445 4445665554 32 2 355555543
No 477
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.01 E-value=0.00064 Score=69.03 Aligned_cols=69 Identities=12% Similarity=0.011 Sum_probs=46.5
Q ss_pred ecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEEeee---CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCc
Q 004816 194 ADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQVLVS---GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKA 270 (729)
Q Consensus 194 ~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~lt~---~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~ 270 (729)
+-..|||++ .|+ +..+ ..|+++|+++|+..++.. ........+|+|||++|+..+. ..
T Consensus 29 ~~l~WS~~~-~lA-vg~D---------~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~--------Dg 89 (318)
T 4ggc_A 29 NLVDWSSGN-VLA-VALD---------NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS--------SA 89 (318)
T ss_dssp BCEEECTTS-EEE-EEET---------TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET--------TS
T ss_pred eEEEECCCC-EEE-EEeC---------CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC--------CC
Confidence 446799987 444 4332 369999999998766543 2345678899999999886652 23
Q ss_pred EEEEEEecCCCC
Q 004816 271 ELWVGYISENGD 282 (729)
Q Consensus 271 ~l~~~d~~~~g~ 282 (729)
.|.++++. +++
T Consensus 90 ~v~iw~~~-~~~ 100 (318)
T 4ggc_A 90 EVQLWDVQ-QQK 100 (318)
T ss_dssp EEEEEETT-TTE
T ss_pred cEEEeecC-Cce
Confidence 46666665 443
No 478
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=97.96 E-value=5.4e-05 Score=73.64 Aligned_cols=143 Identities=13% Similarity=0.096 Sum_probs=87.3
Q ss_pred EEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccc-cc-h------h---------hhHHHhhCCc
Q 004816 460 LIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-IL-N------L---------SIQYWTSRGW 522 (729)
Q Consensus 460 ~~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~-~~-~------~---------~~~~la~~G~ 522 (729)
.+.+... .+..+..|++...+ ..+..|+|++++|||++.... .. . . .-..|. +-.
T Consensus 23 y~~v~~~-~~~~lFywf~es~~------~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~-~~a 94 (255)
T 1whs_A 23 YITVDEG-AGRSLFYLLQEAPE------DAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWN-KVA 94 (255)
T ss_dssp EEEEETT-TTEEEEEEEECCCG------GGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGG-GTS
T ss_pred EEECCCC-CCcEEEEEEEEecC------CCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCccccc-ccC
Confidence 4455444 67889989887643 135679999999999876443 11 0 0 001121 237
Q ss_pred EEEEecCCCCCCCchhHHHhhccCCCc-ccHHHHHHHHH-HHHhCCCCCCCcEEEEEcChHHHHHHHHHh----C---CC
Q 004816 523 AFVDVNYGGSTGYGREFRERLLGRWGI-VDVNDCCSCAT-FLVGSGKADEKRLCITGGSAGGYTTLAALA----F---RD 593 (729)
Q Consensus 523 ~v~~~d~rGs~g~g~~~~~~~~~~~~~-~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~----~---~~ 593 (729)
+++.+|.+-+.|+...-.......++. ...+|+..+++ |+...+.....++.|.|.|+||..+-.++. + .-
T Consensus 95 nvlfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~i 174 (255)
T 1whs_A 95 NVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVI 174 (255)
T ss_dssp EEEEECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSC
T ss_pred CEEEEecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCccc
Confidence 899999654455543211111101121 23556666665 333344455678999999999998877764 1 24
Q ss_pred cceEEEEeccccChhHH
Q 004816 594 TFKAGASLYGVADLSML 610 (729)
Q Consensus 594 ~~~a~v~~~~~~d~~~~ 610 (729)
.++++++.+|+.|....
T Consensus 175 nLkGi~ign~~~d~~~~ 191 (255)
T 1whs_A 175 NLKGFMVGNGLIDDYHD 191 (255)
T ss_dssp EEEEEEEEEECCBHHHH
T ss_pred ccceEEecCCccCHHHh
Confidence 68999999999987543
No 479
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.93 E-value=0.00076 Score=65.19 Aligned_cols=200 Identities=11% Similarity=-0.029 Sum_probs=110.1
Q ss_pred EEEECCEEEEEECCC--CcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEE
Q 004816 150 FRIFGDTVIFSNYKD--QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (729)
Q Consensus 150 ~~~~~~~i~~~~~~~--~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~d 227 (729)
+.++++.++.+.... +.|.++|+++ ++..+-...+ .++..--+.++|++|+-.... ...++++|
T Consensus 26 L~~~~~~LyestG~~g~S~v~~vD~~t--gkv~~~~~l~----~~~fgeGi~~~~~~ly~ltw~--------~~~v~v~D 91 (243)
T 3mbr_X 26 LFYLRGHLYESTGETGRSSVRKVDLET--GRILQRAEVP----PPYFGAGIVAWRDRLIQLTWR--------NHEGFVYD 91 (243)
T ss_dssp EEEETTEEEEEECCTTSCEEEEEETTT--CCEEEEEECC----TTCCEEEEEEETTEEEEEESS--------SSEEEEEE
T ss_pred EEEECCEEEEECCCCCCceEEEEECCC--CCEEEEEeCC----CCcceeEEEEeCCEEEEEEee--------CCEEEEEE
Confidence 345677877777665 3899999998 6543322221 111222345678886665433 36899999
Q ss_pred cCCCceE-EeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeC
Q 004816 228 LNGQNIQ-VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 306 (729)
Q Consensus 228 l~~g~~~-~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ws 306 (729)
.++.+.. ++..+. .+...++||++|+. + +. ..+|+++|.+ +.+........... .-...+..+.|.
T Consensus 92 ~~tl~~~~ti~~~~---~Gwglt~dg~~L~v-S-dg------s~~l~~iDp~-t~~~~~~I~V~~~g-~~~~~lNeLe~~ 158 (243)
T 3mbr_X 92 LATLTPRARFRYPG---EGWALTSDDSHLYM-S-DG------TAVIRKLDPD-TLQQVGSIKVTAGG-RPLDNLNELEWV 158 (243)
T ss_dssp TTTTEEEEEEECSS---CCCEEEECSSCEEE-E-CS------SSEEEEECTT-TCCEEEEEECEETT-EECCCEEEEEEE
T ss_pred CCcCcEEEEEeCCC---CceEEeeCCCEEEE-E-CC------CCeEEEEeCC-CCeEEEEEEEccCC-cccccceeeEEe
Confidence 9987654 443322 23455689988754 4 22 2459999987 66543222221111 000122345565
Q ss_pred CCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCcc---ccC--CcccccCcceeeeeecCCCCEEEEEEEECCeEEEE
Q 004816 307 SKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAE---FSR--PLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 381 (729)
Q Consensus 307 pDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~---~~~--~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly 381 (729)
||++| .... ....|.++|+++|++....+...- ... ..-....+.+++.+ ++++||++. .-+..||
T Consensus 159 -~G~ly-anvw--~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~---~~~~lfVTG--K~wp~~~ 229 (243)
T 3mbr_X 159 -NGELL-ANVW--LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDA---EHDRLFVTG--KRWPMLY 229 (243)
T ss_dssp -TTEEE-EEET--TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEET---TTTEEEEEE--TTCSEEE
T ss_pred -CCEEE-EEEC--CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcC---CCCEEEEEC--CCCCcEE
Confidence 77755 4333 234899999999997765532211 000 00001123455543 566777664 3456777
Q ss_pred EEEC
Q 004816 382 ILDD 385 (729)
Q Consensus 382 ~~d~ 385 (729)
.+.+
T Consensus 230 ~v~~ 233 (243)
T 3mbr_X 230 EIRL 233 (243)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 480
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.92 E-value=0.00053 Score=66.91 Aligned_cols=192 Identities=9% Similarity=-0.002 Sum_probs=113.4
Q ss_pred CceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEEEEe
Q 004816 92 GGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKHS 171 (729)
Q Consensus 92 ~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~d 171 (729)
.++.++ ++.+|.... ..|+ |..++..++.-.+.+++. .+-+....+.+++|+.....++.++++|
T Consensus 58 qGL~~~-~~~Ly~stG---~~g~--v~~iD~~Tgkv~~~~l~~---------~~FgeGit~~g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 58 QGLVFH-QGHFFESTG---HQGT--LRQLSLESAQPVWMERLG---------NIFAEGLASDGERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp EEEEEE-TTEEEEEET---TTTE--EEECCSSCSSCSEEEECT---------TCCEEEEEECSSCEEEEESSSCEEEEEE
T ss_pred ceEEEE-CCEEEEEcC---CCCE--EEEEECCCCcEEeEECCC---------CcceeEEEEeCCEEEEEEccCCEEEEEE
Confidence 678888 888877665 3344 666676633222222211 1112335677889988888889999999
Q ss_pred CCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE-ee--eCC---Ceeee
Q 004816 172 IDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV-LV--SGS---DFYAF 245 (729)
Q Consensus 172 ~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~-lt--~~~---~~~~~ 245 (729)
.++. ....++.... ....+++||++|+.+ +. ...|+++|.++.++.. +. ... ...+.
T Consensus 123 ~~Tl-~~~~ti~~~~-------eGwGLt~Dg~~L~vS-dG--------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNe 185 (268)
T 3nok_A 123 GMPP-QRERTTRYSG-------EGWGLCYWNGKLVRS-DG--------GTMLTFHEPDGFALVGAVQVKLRGQPVELINE 185 (268)
T ss_dssp TTTT-EEEEEEECSS-------CCCCEEEETTEEEEE-CS--------SSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred CCcC-cEEEEEeCCC-------ceeEEecCCCEEEEE-CC--------CCEEEEEcCCCCeEEEEEEeCCCCcccccccc
Confidence 9872 2233444321 123456789975544 42 1579999999977643 32 222 13345
Q ss_pred eeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecC---------CCCCccccccCceeCCCCcEEEEEe
Q 004816 246 PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG---------FDPTIVESPTEPKWSSKGELFFVTD 316 (729)
Q Consensus 246 ~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~wspDG~l~~~~~ 316 (729)
..|. || +|+... |...+|.++|.+ +|++....-+.+ .+.. .....++|+|+++-+|++.
T Consensus 186 Le~~-dG-~lyanv-------w~s~~I~vIDp~-TG~V~~~Idl~~L~~~~~~~~~~~~--~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 186 LECA-NG-VIYANI-------WHSSDVLEIDPA-TGTVVGVIDASALTRAVAGQVTNPE--AVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEE-TT-EEEEEE-------TTCSEEEEECTT-TCBEEEEEECHHHHHHHTTTCCCTT--CCEEEEEECTTTCCEEEEE
T ss_pred cEEe-CC-EEEEEE-------CCCCeEEEEeCC-CCcEEEEEECCCCcccccccccCcC--CceEEEEEcCCCCEEEEeC
Confidence 5676 77 465333 234579999998 888644333321 1111 2446789999988444443
Q ss_pred cCCCceEEEEEEc
Q 004816 317 RKNGFWNLHKWIE 329 (729)
Q Consensus 317 ~~~g~~~l~~~d~ 329 (729)
. .|..||.+.+
T Consensus 254 K--~Wp~~~ev~~ 264 (268)
T 3nok_A 254 K--LWPRLFEVRL 264 (268)
T ss_dssp T--TCSEEEEEEE
T ss_pred C--CCCceEEEEE
Confidence 3 5677887654
No 481
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.90 E-value=0.0011 Score=71.05 Aligned_cols=149 Identities=11% Similarity=0.084 Sum_probs=88.6
Q ss_pred CEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce-
Q 004816 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI- 233 (729)
Q Consensus 155 ~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~- 233 (729)
+.|++.+.. ..|+++++++ +..+.+... ......++++|||+ |+++....... ...++.++..++..
T Consensus 153 g~Lyv~D~~-~~I~~id~~~--g~v~~~~~~----~~~P~giavd~dG~-lyVad~~~~~~----~~gv~~~~~~~~~~~ 220 (433)
T 4hw6_A 153 DDLYWVGQR-DAFRHVDFVN--QYVDIKTTN----IGQCADVNFTLNGD-MVVVDDQSSDT----NTGIYLFTRASGFTE 220 (433)
T ss_dssp CEEEEECBT-SCEEEEETTT--TEEEEECCC----CSCEEEEEECTTCC-EEEEECCSCTT----SEEEEEECGGGTTCC
T ss_pred CEEEEEeCC-CCEEEEECCC--CEEEEeecC----CCCccEEEECCCCC-EEEEcCCCCcc----cceEEEEECCCCeec
Confidence 567766554 7899999976 666666543 23457889999999 54443321111 24466666654432
Q ss_pred -EEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEE
Q 004816 234 -QVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELF 312 (729)
Q Consensus 234 -~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~ 312 (729)
..+. ......+.+++|++..|++... ....|++++.+ +|.........+.. .....++|+|||+.+
T Consensus 221 ~~~~~-~~~~P~giavd~~~G~lyv~d~-------~~~~V~~~d~~-~g~~~~~~~~~~~~----~~~~~ia~dpdG~~L 287 (433)
T 4hw6_A 221 RLSLC-NARGAKTCAVHPQNGKIYYTRY-------HHAMISSYDPA-TGTLTEEEVMMDTK----GSNFHIVWHPTGDWA 287 (433)
T ss_dssp EEEEE-ECSSBCCCEECTTTCCEEECBT-------TCSEEEEECTT-TCCEEEEEEECSCC----SSCEEEEECTTSSEE
T ss_pred ccccc-ccCCCCEEEEeCCCCeEEEEEC-------CCCEEEEEECC-CCeEEEEEeccCCC----CCcccEEEeCCCCEE
Confidence 2333 2233456789995556876653 23569999987 67652222222221 222358999999944
Q ss_pred EEEecCCCceEEEEEEcC
Q 004816 313 FVTDRKNGFWNLHKWIES 330 (729)
Q Consensus 313 ~~~~~~~g~~~l~~~d~~ 330 (729)
|+++. +..+|++++.+
T Consensus 288 Yvad~--~~~~I~~~~~d 303 (433)
T 4hw6_A 288 YIIYN--GKHCIYRVDYN 303 (433)
T ss_dssp EEEET--TTTEEEEEEBC
T ss_pred EEEeC--CCCEEEEEeCC
Confidence 45544 45678887765
No 482
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.89 E-value=0.00019 Score=79.11 Aligned_cols=218 Identities=8% Similarity=-0.057 Sum_probs=119.3
Q ss_pred CCCCcEEEEeCCCCCCCCe-----ecCCCCCCCceeeecceecCC------CCEEEEEEeccCCCCCCcceEEEEEEcCC
Q 004816 162 YKDQRLYKHSIDSKDSSPL-----PITPDYGEPLVSYADGIFDPR------FNRYVTVREDRRQDALNSTTEIVAIALNG 230 (729)
Q Consensus 162 ~~~~~l~~~d~~~~~~~~~-----~lt~~~~~~~~~~~~~~~SPd------G~~l~~~~~~~~~~~~~~~~~l~~~dl~~ 230 (729)
..++.|.+|++++ ++.. .+... ...+...+|+|+ |+.|+....+ ..|.++++.+
T Consensus 180 s~D~tI~iWd~~~--~~~~~~~~~~l~~~----~~~V~~v~wsp~~~~~~~~~~LAs~s~D---------gtvrlWd~~~ 244 (524)
T 2j04_B 180 KHSSCIQIFKMNT--STLHCVKVQTIVHS----FGEVWDLKWHEGCHAPHLVGCLSFVSQE---------GTINFLEIID 244 (524)
T ss_dssp --CEEEEEEEEET--TTCCEEEEEEEEEC----CCSEEEEEECSSCCCSSSSCEEEEEETT---------SCEEEEECCC
T ss_pred CCCceEEEEEccC--CCCCceEEEEEEec----CCcEEEEEECCCCCCCCCCceEEEEecC---------CeEEEEEcCC
Confidence 3456677888776 4421 12222 234677889997 5666655543 3477778876
Q ss_pred Cce------------EEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccc
Q 004816 231 QNI------------QVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 298 (729)
Q Consensus 231 g~~------------~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~ 298 (729)
++. ..+..........+|+|++ .|+..+ ....|.++|+. ++.. ....+.+.. .
T Consensus 245 ~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs--------~DgtV~lWD~~-~~~~-~~~~~~~H~----~ 309 (524)
T 2j04_B 245 NATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGF--------KNGFVAEFDLT-DPEV-PSFYDQVHD----S 309 (524)
T ss_dssp CSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEE--------TTSEEEEEETT-BCSS-CSEEEECSS----S
T ss_pred CccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEe--------CCCEEEEEECC-CCCC-ceEEeeccc----c
Confidence 532 1233334556778999875 566554 23459999998 5532 233455554 4
Q ss_pred cccCc--eeCCCC-cEEEEEecCCCceEEEEEEcCCCeEE-EeeccC--ccccCCcccccCcceeeeeecCCCCEEEEEE
Q 004816 299 SPTEP--KWSSKG-ELFFVTDRKNGFWNLHKWIESNNEVL-AIYSLD--AEFSRPLWVFGINSYEIIQSHGEKNLIACSY 372 (729)
Q Consensus 299 ~~~~~--~wspDG-~l~~~~~~~~g~~~l~~~d~~~g~~~-~l~~~~--~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s 372 (729)
.+..+ .|++|| ++++.... .+. |.++|+.+++.. .+.... ..+. .+.|.| +++. ++++
T Consensus 310 ~V~sv~~~~s~~g~~~laS~S~-D~t--vklWD~~~~~~~~~~~~~~~~~~v~---------~v~fsp---~~~~-l~s~ 373 (524)
T 2j04_B 310 YILSVSTAYSDFEDTVVSTVAV-DGY--FYIFNPKDIATTKTTVSRFRGSNLV---------PVVYCP---QIYS-YIYS 373 (524)
T ss_dssp CEEEEEEECCTTSCCEEEEEET-TSE--EEEECGGGHHHHCEEEEECSCCSCC---------CEEEET---TTTE-EEEE
T ss_pred cEEEEEEEcCCCCCeEEEEecc-CCe--EEEEECCCCCcccccccccccCccc---------ceEeCC---CcCe-EEEe
Confidence 55666 578998 66666554 444 555577665422 222111 0111 234442 5554 4444
Q ss_pred EECCeEEEEEEECCCCce-EeeccCCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCC
Q 004816 373 RQNGRSYLGILDDFGHSL-SLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDD 430 (729)
Q Consensus 373 ~~~g~~~ly~~d~~~g~~-~~lt~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~ 430 (729)
..++...| +|+.++.. ..+......|..+ ..+++.+++.++.. ..+.++++..
T Consensus 374 ~~d~tv~l--wd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~D---gtv~lwd~~~ 428 (524)
T 2j04_B 374 DGASSLRA--VPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSAD---GSLIITNAAR 428 (524)
T ss_dssp CSSSEEEE--EETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETT---TEEECCBSCS
T ss_pred CCCCcEEE--EECcccccceeeecCCCceEEEEeCCCCCeEEEEECC---CEEEEEechH
Confidence 45555444 47666553 5566666677777 44455555555533 2455555543
No 483
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.86 E-value=0.0046 Score=61.95 Aligned_cols=223 Identities=10% Similarity=0.014 Sum_probs=121.5
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV 235 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~ 235 (729)
.+++.....+.|++++.++ ....+.... .........++|||+. ++.... ...|++++.+ ++.+.
T Consensus 27 ~l~v~~~~~~~v~~~d~~~---~~~~~~~~~--~~~~~~~i~~~~~g~l-~v~~~~--------~~~i~~~~~~-g~~~~ 91 (299)
T 2z2n_A 27 KVWITQHKANMISCINLDG---KITEYPLPT--PDAKVMCLTISSDGEV-WFTENA--------ANKIGRITKK-GIIKE 91 (299)
T ss_dssp CEEEEETTTTEEEEECTTC---CEEEEECSS--TTCCEEEEEECTTSCE-EEEETT--------TTEEEEECTT-SCEEE
T ss_pred CEEEEecCCCcEEEEcCCC---CeEEecCCc--ccCceeeEEECCCCCE-EEeCCC--------CCeEEEECCC-CcEEE
Confidence 5555555567899998873 333332110 0234567789999984 333221 1469999987 55554
Q ss_pred eee--CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEE
Q 004816 236 LVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFF 313 (729)
Q Consensus 236 lt~--~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~ 313 (729)
+.. ......+..++|||+ |++.... ...|+++|.+ ++.... ...... ..+..+.+++||++++
T Consensus 92 ~~~~~~~~~~~~i~~~~~g~-l~v~~~~-------~~~i~~~d~~--g~~~~~-~~~~~~----~~~~~i~~~~~g~l~v 156 (299)
T 2z2n_A 92 YTLPNPDSAPYGITEGPNGD-IWFTEMN-------GNRIGRITDD--GKIREY-ELPNKG----SYPSFITLGSDNALWF 156 (299)
T ss_dssp EECSSTTCCEEEEEECTTSC-EEEEETT-------TTEEEEECTT--CCEEEE-ECSSTT----CCEEEEEECTTSCEEE
T ss_pred EeCCCcCCCceeeEECCCCC-EEEEecC-------CceEEEECCC--CCEEEe-cCCCCC----CCCceEEEcCCCCEEE
Confidence 432 223455678899986 5554421 2458888863 544221 122222 3445678899998766
Q ss_pred EEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEee
Q 004816 314 VTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 393 (729)
Q Consensus 314 ~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~l 393 (729)
... +...|+++|+ +++.+.+.... .... ...+.+. .++.+|+.... ...|++++. +++.+.+
T Consensus 157 ~~~---~~~~i~~~~~-~g~~~~~~~~~-~~~~------~~~i~~~----~~g~l~v~~~~--~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 157 TEN---QNNAIGRITE-SGDITEFKIPT-PASG------PVGITKG----NDDALWFVEII--GNKIGRITT-SGEITEF 218 (299)
T ss_dssp EET---TTTEEEEECT-TCCEEEEECSS-TTCC------EEEEEEC----TTSSEEEEETT--TTEEEEECT-TCCEEEE
T ss_pred EeC---CCCEEEEEcC-CCcEEEeeCCC-CCCc------ceeEEEC----CCCCEEEEccC--CceEEEECC-CCcEEEE
Confidence 543 2346899998 67665542111 1111 1123332 33446655432 336888888 6666555
Q ss_pred ccC--CcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcC
Q 004816 394 DIP--FTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLD 429 (729)
Q Consensus 394 t~~--~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~ 429 (729)
..+ ...+..+ ...++.+++.... ...|++++.+
T Consensus 219 ~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~~ 254 (299)
T 2z2n_A 219 KIPTPNARPHAITAGAGIDLWFTEWG---ANKIGRLTSN 254 (299)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETT---TTEEEEEETT
T ss_pred ECCCCCCCceeEEECCCCCEEEeccC---CceEEEECCC
Confidence 332 3345555 3334554443322 3468888873
No 484
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.83 E-value=0.016 Score=62.12 Aligned_cols=227 Identities=9% Similarity=0.050 Sum_probs=128.4
Q ss_pred CceEEEECCEEEEEECCCCcEEEEeCCCCCCCC-eecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEE
Q 004816 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (729)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~~~l~~~d~~~~~~~~-~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~ 225 (729)
..+..++++ ++++...++.|.+|++.+ ++. ..+... ...+....| +++.++....+ ..|.+
T Consensus 162 v~~~~~~~~-~l~s~~~dg~i~vwd~~~--~~~~~~~~~h----~~~v~~~~~--~~~~l~s~s~d---------g~i~~ 223 (445)
T 2ovr_B 162 VWSSQMRDN-IIISGSTDRTLKVWNAET--GECIHTLYGH----TSTVRCMHL--HEKRVVSGSRD---------ATLRV 223 (445)
T ss_dssp EEEEEEETT-EEEEEETTSCEEEEETTT--TEEEEEECCC----SSCEEEEEE--ETTEEEEEETT---------SEEEE
T ss_pred EEEEEecCC-EEEEEeCCCeEEEEECCc--CcEEEEECCC----CCcEEEEEe--cCCEEEEEeCC---------CEEEE
Confidence 344555655 455556788999999987 543 333332 233455555 56666555443 46999
Q ss_pred EEcCCCceEEeee-CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCce
Q 004816 226 IALNGQNIQVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 304 (729)
Q Consensus 226 ~dl~~g~~~~lt~-~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 304 (729)
+|+.+++...... .........| ||+.|+..+. ...|.++|+. +++. ...+.+.. ..+..+.
T Consensus 224 wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~--------dg~i~iwd~~-~~~~--~~~~~~~~----~~v~~~~ 286 (445)
T 2ovr_B 224 WDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAY--------DFMVKVWDPE-TETC--LHTLQGHT----NRVYSLQ 286 (445)
T ss_dssp EESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEET--------TSCEEEEEGG-GTEE--EEEECCCS----SCEEEEE
T ss_pred EECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcC--------CCEEEEEECC-CCcE--eEEecCCC----CceEEEE
Confidence 9999887654433 3344455556 8888876652 2348999988 5654 44444444 4455666
Q ss_pred eCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEE
Q 004816 305 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 384 (729)
Q Consensus 305 wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d 384 (729)
| ||+.++.... .+ .|.++|+.+++......... ... ..+.+ +++ ++++...+|...+| |
T Consensus 287 ~--~~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~---~~v-----~~~~~-----~~~-~l~~~~~dg~i~vw--d 345 (445)
T 2ovr_B 287 F--DGIHVVSGSL-DT--SIRVWDVETGNCIHTLTGHQ---SLT-----SGMEL-----KDN-ILVSGNADSTVKIW--D 345 (445)
T ss_dssp E--CSSEEEEEET-TS--CEEEEETTTCCEEEEECCCC---SCE-----EEEEE-----ETT-EEEEEETTSCEEEE--E
T ss_pred E--CCCEEEEEeC-CC--eEEEEECCCCCEEEEEcCCc---ccE-----EEEEE-----eCC-EEEEEeCCCeEEEE--E
Confidence 7 7774444443 34 46667887776544332110 111 11222 344 45555667765555 6
Q ss_pred CCCCce-Eeecc---CCcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 385 DFGHSL-SLLDI---PFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 385 ~~~g~~-~~lt~---~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
+.+++. ..+.. ....+..+..+++ +++.++.. ..+..+++.+++.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~s~~~d---g~v~iwd~~~~~~ 394 (445)
T 2ovr_B 346 IKTGQCLQTLQGPNKHQSAVTCLQFNKN-FVITSSDD---GTVKLWDLKTGEF 394 (445)
T ss_dssp TTTCCEEEEECSTTSCSSCEEEEEECSS-EEEEEETT---SEEEEEETTTCCE
T ss_pred CCCCcEEEEEccCCCCCCCEEEEEECCC-EEEEEeCC---CeEEEEECCCCce
Confidence 666553 44443 3345666655444 44544433 4688888887764
No 485
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.80 E-value=0.0015 Score=63.16 Aligned_cols=198 Identities=13% Similarity=0.095 Sum_probs=116.0
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEEE
Q 004816 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYK 169 (729)
Q Consensus 90 ~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~ 169 (729)
...++.++ ++.+|.... ..|+..|...+..+ |+...-.+-+ ..+-+....+.+++|+.....++.+++
T Consensus 22 ftqGL~~~-~~~LyestG---~~g~S~v~~vD~~t-gkv~~~~~l~-------~~~fgeGi~~~~~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 22 FTEGLFYL-RGHLYESTG---ETGRSSVRKVDLET-GRILQRAEVP-------PPYFGAGIVAWRDRLIQLTWRNHEGFV 89 (243)
T ss_dssp CEEEEEEE-TTEEEEEEC---CTTSCEEEEEETTT-CCEEEEEECC-------TTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred ccccEEEE-CCEEEEECC---CCCCceEEEEECCC-CCEEEEEeCC-------CCcceeEEEEeCCEEEEEEeeCCEEEE
Confidence 34578888 777777554 34555677777763 3332222111 112233466778999888888899999
Q ss_pred EeCCCCCCC-CeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE-Eee--eCC---Ce
Q 004816 170 HSIDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-VLV--SGS---DF 242 (729)
Q Consensus 170 ~d~~~~~~~-~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~-~lt--~~~---~~ 242 (729)
+|.++ .+ ...+.... ....+++||++|+ +++. ...|+++|.++.++. .+. ... ..
T Consensus 90 ~D~~t--l~~~~ti~~~~-------~Gwglt~dg~~L~-vSdg--------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~ 151 (243)
T 3mbr_X 90 YDLAT--LTPRARFRYPG-------EGWALTSDDSHLY-MSDG--------TAVIRKLDPDTLQQVGSIKVTAGGRPLDN 151 (243)
T ss_dssp EETTT--TEEEEEEECSS-------CCCEEEECSSCEE-EECS--------SSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred EECCc--CcEEEEEeCCC-------CceEEeeCCCEEE-EECC--------CCeEEEEeCCCCeEEEEEEEccCCccccc
Confidence 99987 33 33343321 1234567888754 4442 157999999987654 332 211 23
Q ss_pred eeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCC-------ccccccCceeCCCCcEEEEE
Q 004816 243 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPT-------IVESPTEPKWSSKGELFFVT 315 (729)
Q Consensus 243 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~wspDG~l~~~~ 315 (729)
.+...|. ||+ |+ +.. |...+|.++|.+ +|++....-+.+..+. -...+..++|+|+++-+|++
T Consensus 152 lNeLe~~-~G~-ly-anv------w~s~~I~vIDp~-tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 152 LNELEWV-NGE-LL-ANV------WLTSRIARIDPA-SGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp EEEEEEE-TTE-EE-EEE------TTTTEEEEECTT-TCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred ceeeEEe-CCE-EE-EEE------CCCCeEEEEECC-CCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 3445554 665 54 442 234579999998 8886444333321000 00234678999998855555
Q ss_pred ecCCCceEEEEEEc
Q 004816 316 DRKNGFWNLHKWIE 329 (729)
Q Consensus 316 ~~~~g~~~l~~~d~ 329 (729)
.. .|..||.+.+
T Consensus 222 GK--~wp~~~~v~~ 233 (243)
T 3mbr_X 222 GK--RWPMLYEIRL 233 (243)
T ss_dssp ET--TCSEEEEEEE
T ss_pred CC--CCCcEEEEEE
Confidence 43 5677887665
No 486
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.78 E-value=0.00083 Score=72.31 Aligned_cols=161 Identities=7% Similarity=0.003 Sum_probs=96.6
Q ss_pred CCEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeeccee-------cCCCCEEEEEEeccCCCCCCcceEEEEE
Q 004816 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIF-------DPRFNRYVTVREDRRQDALNSTTEIVAI 226 (729)
Q Consensus 154 ~~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~-------SPdG~~l~~~~~~~~~~~~~~~~~l~~~ 226 (729)
++.|++.......|+++|+++ +....|.........+...++| +++|++|++....... . .....++++
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~--~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~-~-~~~~~V~~i 226 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKN--RMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK-G-DESPSVYII 226 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTT--TEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT-G-GGEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEECCC--CEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC-c-ccCceEEEE
Confidence 446666665556899999987 6776655432111234577889 9999986655443211 0 113468888
Q ss_pred EcCC-Cce------EEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecC------CCCe------e---
Q 004816 227 ALNG-QNI------QVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE------NGDV------Y--- 284 (729)
Q Consensus 227 dl~~-g~~------~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~------~g~~------~--- 284 (729)
+.+. |+. +.+... ....+.+.+|+++.|+++... ..+|+++|++. ++.. .
T Consensus 227 ~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~-------~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 227 KRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYE-------KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp ECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETT-------TTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred ecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECC-------CCEEEEEecccccccccCceeeccccccccc
Confidence 7655 333 334322 234567899988889888742 34699999861 2432 0
Q ss_pred -eeEEecCCCCCccccccCceeCCCCcEEEEEecCCCceEEEEEEcCC
Q 004816 285 -KRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESN 331 (729)
Q Consensus 285 -~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~ 331 (729)
...+..-.+ . .....++|+|||+.+|+++. +..+|++++.++
T Consensus 299 ~~~~l~~~~~-~--~~p~~ia~~p~G~~lYvaD~--~~h~I~kid~dg 341 (496)
T 3kya_A 299 TFKQLFTIAD-P--SWEFQIFIHPTGKYAYFGVI--NNHYFMRSDYDE 341 (496)
T ss_dssp TEEEEEECSS-S--SCCEEEEECTTSSEEEEEET--TTTEEEEEEEET
T ss_pred ccceeEecCC-C--CCceEEEEcCCCCEEEEEeC--CCCEEEEEecCC
Confidence 011222111 1 23457899999995566665 567888877654
No 487
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.77 E-value=0.00037 Score=75.00 Aligned_cols=116 Identities=11% Similarity=0.035 Sum_probs=69.9
Q ss_pred eeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCC-----ce------EEeee-CCCeeeeeeeCCC-CCeEEEE
Q 004816 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ-----NI------QVLVS-GSDFYAFPRMDPR-GERMAWI 258 (729)
Q Consensus 192 ~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g-----~~------~~lt~-~~~~~~~~~~SPD-G~~la~~ 258 (729)
.+...+|||||++|+........ ...|.++|+.++ +. ..+.. ........+|+|+ ++.|+..
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~-----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEY-----GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTT-----EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred cccEEEEcCCCCEEEEEEeccCC-----CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 36778999999988753211100 256888888654 11 11111 2345677899998 6666655
Q ss_pred EecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceEEEEEEcCC
Q 004816 259 EWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESN 331 (729)
Q Consensus 259 ~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~~~ 331 (729)
+. ...|.++|+. ++.. .....+.. ..+..++|+|||+ |+... . .+ .|.++|+++
T Consensus 169 s~--------Dg~v~iwD~~-~~~~--~~~~~~~~----~~v~~v~wspdg~~lasgs-~-dg--~v~iwd~~~ 223 (434)
T 2oit_A 169 LA--------DGSIAVLQVT-ETVK--VCATLPST----VAVTSVCWSPKGKQLAVGK-Q-NG--TVVQYLPTL 223 (434)
T ss_dssp ET--------TSCEEEEEES-SSEE--EEEEECGG----GCEEEEEECTTSSCEEEEE-T-TS--CEEEECTTC
T ss_pred EC--------CCeEEEEEcC-CCcc--eeeccCCC----CceeEEEEcCCCCEEEEEc-C-CC--cEEEEccCC
Confidence 52 2348999998 5532 22222322 4567789999999 55444 3 34 466677773
No 488
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=97.77 E-value=0.00012 Score=75.13 Aligned_cols=93 Identities=9% Similarity=0.010 Sum_probs=56.5
Q ss_pred CCEEEEEcCCCCCCccccchhhhHHHhhCCcEEEEecCCCCCCCchhHHHhhccCCCcccHHHHHHHHHHHHhCCCCCCC
Q 004816 492 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 571 (729)
Q Consensus 492 ~P~vv~~hGg~~~~~~~~~~~~~~~la~~G~~v~~~d~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 571 (729)
.+.|+++||..++ ...|..+...+. +.|+.+++++.. ....++++...+...+... ...+
T Consensus 46 ~~~l~~~hg~~g~--~~~~~~~~~~l~---~~v~~~~~~~~~--------------~~~~~~~~a~~~~~~i~~~-~~~~ 105 (316)
T 2px6_A 46 ERPLFLVHPIEGS--TTVFHSLASRLS---IPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQV-QPEG 105 (316)
T ss_dssp SCCEEEECCTTCC--SGGGHHHHHHCS---SCEEEECCCTTS--------------CTTCHHHHHHHHHHHHTTT-CSSC
T ss_pred CCeEEEECCCCCC--HHHHHHHHHhcC---CCEEEEECCCCC--------------CcCCHHHHHHHHHHHHHHh-CCCC
Confidence 4568899997433 345555555553 899999997210 0112344433333333321 1236
Q ss_pred cEEEEEcChHHHHHHHHHh-C---CCc---ceEEEEeccc
Q 004816 572 RLCITGGSAGGYTTLAALA-F---RDT---FKAGASLYGV 604 (729)
Q Consensus 572 ri~i~G~S~GG~~a~~~~~-~---~~~---~~a~v~~~~~ 604 (729)
++.++|||+||.+|+.++. . +.. ++.++++++.
T Consensus 106 ~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 106 PYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp CCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred CEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 7999999999999988875 2 345 7888876654
No 489
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.76 E-value=0.00056 Score=72.46 Aligned_cols=107 Identities=7% Similarity=-0.065 Sum_probs=67.2
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCe---ecCCCCCCCceeeecceecC--------CCCEEEEEEeccCCCCCCcceEEE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDP--------RFNRYVTVREDRRQDALNSTTEIV 224 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~---~lt~~~~~~~~~~~~~~~SP--------dG~~l~~~~~~~~~~~~~~~~~l~ 224 (729)
.++.+...++.|.+|++++ ++.. .+... .+....+.+.+|+| ||+.|+-...+ ..|.
T Consensus 102 ~~las~~~d~~v~lw~~~~--~~~~~~~~~~~~-~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D---------~tv~ 169 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKN--ETIITQHVLGGK-SGHHNFVNDIDIADVYSADNRLAEQVIASVGDD---------CTLI 169 (393)
T ss_dssp EEEEEEETTSCEEEEEEET--TEEEEEEEECTT-TSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT---------SEEE
T ss_pred CEEEEEeCCCcEEEEECCC--Cccceeeeeccc-CCCCCceEEEEEccccccccCCCCCEEEEEECC---------CeEE
Confidence 4455556677888888876 4322 11111 11145678889998 88877666554 3588
Q ss_pred EEEcCCCc-eEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCC
Q 004816 225 AIALNGQN-IQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD 282 (729)
Q Consensus 225 ~~dl~~g~-~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~ 282 (729)
++|+.++. ...+..........+|+|++..++..... ...|.++|+. +++
T Consensus 170 ~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~-------d~~v~~wd~~-t~~ 220 (393)
T 4gq1_A 170 IWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGER-------NGNIRIFDWT-LNL 220 (393)
T ss_dssp EEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEET-------TSEEEEEETT-CCC
T ss_pred EEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCC-------CCEEEEEECC-CCc
Confidence 88887654 34455555666788999998754444422 3458888887 443
No 490
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.74 E-value=0.00016 Score=77.91 Aligned_cols=155 Identities=7% Similarity=-0.059 Sum_probs=86.8
Q ss_pred eEEEE--CCEEEE---EECCCCcEEEEeCCCCCC-----CC-------eecCCCCCCCceeeecceecCC-CCEEEEEEe
Q 004816 149 AFRIF--GDTVIF---SNYKDQRLYKHSIDSKDS-----SP-------LPITPDYGEPLVSYADGIFDPR-FNRYVTVRE 210 (729)
Q Consensus 149 ~~~~~--~~~i~~---~~~~~~~l~~~d~~~~~~-----~~-------~~lt~~~~~~~~~~~~~~~SPd-G~~l~~~~~ 210 (729)
..+++ +..++. +...++.|.+||+.+ + .. +.+... ...+...+|+|+ ++.|+....
T Consensus 97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~~--~~~~~~~~~~~~~~~~~~~~h----~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRT--FSNEAKQQKRPFAYHKLLKDA----GGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHHH--HHCTTCSSCCCSEEEECCCSG----GGSEEEEEECSSCTTEEEEEET
T ss_pred EEEEcCCCCEEEEEEeccCCCceEEEEEccc--cccCCcCCcceeeeeeccCCC----CCceEEEEECCCCCCEEEEEEC
Confidence 34444 444444 444567899999864 2 11 111111 345688899998 665554443
Q ss_pred ccCCCCCCcceEEEEEEcCCCceEEeeeC-CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEe
Q 004816 211 DRRQDALNSTTEIVAIALNGQNIQVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV 289 (729)
Q Consensus 211 ~~~~~~~~~~~~l~~~dl~~g~~~~lt~~-~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~ 289 (729)
+ ..|.++|+.++.......+ .......+|||||++|+.... ...|.++|+. ++. ...+
T Consensus 171 D---------g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~--------dg~v~iwd~~--~~~--~~~~ 229 (434)
T 2oit_A 171 D---------GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ--------NGTVVQYLPT--LQE--KKVI 229 (434)
T ss_dssp T---------SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET--------TSCEEEECTT--CCE--EEEE
T ss_pred C---------CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC--------CCcEEEEccC--Ccc--cccc
Confidence 3 4588999987743322222 345677899999999987662 2348888876 332 2222
Q ss_pred cCCC---CCccccccCceeCCCCc-EEEEEecCCCc----eEEEEEEcCC
Q 004816 290 AGFD---PTIVESPTEPKWSSKGE-LFFVTDRKNGF----WNLHKWIESN 331 (729)
Q Consensus 290 ~~~~---~~~~~~~~~~~wspDG~-l~~~~~~~~g~----~~l~~~d~~~ 331 (729)
.... .+....+..+.|++++. ++..... .|. ..+..+++..
T Consensus 230 ~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~-dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 230 PCPPFYESDHPVRVLDVLWIGTYVFAIVYAAA-DGTLETSPDVVMALLPK 278 (434)
T ss_dssp CCCTTCCTTSCEEEEEEEEEETTEEEEEEEET-TCCSSSCCEEEEEECCC
T ss_pred cCCcccCCCCceeEEEEEEecCceEEEEEccC-CCccCCCCceEEEEecc
Confidence 2111 00002556789999887 3333332 322 3466666654
No 491
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.72 E-value=0.00042 Score=71.96 Aligned_cols=199 Identities=13% Similarity=0.078 Sum_probs=107.0
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCc-cc-CCCCCcccccccccCCceEEEE--CCEEEEEEC--
Q 004816 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPS-DI-TPKEYAVRTTAQEYGGGAFRIF--GDTVIFSNY-- 162 (729)
Q Consensus 89 ~~~~~~~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~-~l-~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~-- 162 (729)
..+.++.++|.+++|+++......+...|++++..+ ++.. .+ ++..... .......+.++ ++.+++++.
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t-g~~~~~~~~~~~~~~----~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN-NQLSRVIYLPPPITL----SNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT-TEEEEEEECCTTTSC----TTCCCCEEEEETTTTEEEEEECCS
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC-CeEEEEEECChhhcc----cccccceEEEecCCCEEEEEcCcc
Confidence 456788999866799987531000012466676552 2322 22 1111000 00111334555 456667665
Q ss_pred -CCCcEEEEeCCCCCCCCeecCCC-----CCC-----Cc----------------eeeecceecCCCCEEEEEEeccCCC
Q 004816 163 -KDQRLYKHSIDSKDSSPLPITPD-----YGE-----PL----------------VSYADGIFDPRFNRYVTVREDRRQD 215 (729)
Q Consensus 163 -~~~~l~~~d~~~~~~~~~~lt~~-----~~~-----~~----------------~~~~~~~~SPdG~~l~~~~~~~~~~ 215 (729)
....|+++|+++ ++..++... ++. .+ ......+|||||+.|++.....
T Consensus 142 ~~~~~i~v~d~~~--g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~--- 216 (343)
T 2qe8_A 142 DDKAALIRVDLQT--GLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS--- 216 (343)
T ss_dssp GGGCEEEEEETTT--CCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC---
T ss_pred CCCCeEEEEECCC--CCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC---
Confidence 456899999986 554443211 000 00 1235688999999876664322
Q ss_pred CCCcceEEEEEEcCC---Cc---------eEEeeeCCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCe
Q 004816 216 ALNSTTEIVAIALNG---QN---------IQVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV 283 (729)
Q Consensus 216 ~~~~~~~l~~~dl~~---g~---------~~~lt~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~ 283 (729)
..||+++.+. +. ...+ .......+.++++||+ |++..+ ....|.++|.+ +|+.
T Consensus 217 -----~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~-l~va~~-------~~~~V~~~d~~-~G~~ 281 (343)
T 2qe8_A 217 -----TSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHN-IYVGDL-------AHSAIGVITSA-DRAY 281 (343)
T ss_dssp -----SEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCC-EEEEEG-------GGTEEEEEETT-TTEE
T ss_pred -----CeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCC-EEEEcc-------CCCeEEEEECC-CCCE
Confidence 4799998531 11 1111 1122345678999986 665553 34569999974 4654
Q ss_pred eeeEEecCCCCCccccccCceeCCCCcEEEEEec
Q 004816 284 YKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDR 317 (729)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~ 317 (729)
..+..... . .....+++++||+|+++...
T Consensus 282 --~~~~~~~~-~--~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 282 --KLLVTDEK-L--SWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp --EEEEECGG-G--SCEEEEEECTTSCEEEEECC
T ss_pred --EEEEECCc-e--ecCCeeEECCCCcEEEEeCc
Confidence 22222110 0 34567788888877766654
No 492
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.69 E-value=0.0027 Score=63.45 Aligned_cols=182 Identities=10% Similarity=-0.004 Sum_probs=98.8
Q ss_pred eEEEEEEcCCCceE-EeeeCC-CeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccc
Q 004816 221 TEIVAIALNGQNIQ-VLVSGS-DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 298 (729)
Q Consensus 221 ~~l~~~dl~~g~~~-~lt~~~-~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~ 298 (729)
..|+++|.++|+.. ++..+. .......++|||+.|+ +. ...|+.+|.+ |+..+. ...+.. .
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~--------~~~V~~~d~~--G~~~W~-~~~~~~----~ 77 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SY--------SKGAKMITRD--GRELWN-IAAPAG----C 77 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--EC--------BSEEEEECTT--SCEEEE-EECCTT----C
T ss_pred CEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eC--------CCCEEEECCC--CCEEEE-EcCCCC----c
Confidence 57999999888764 333222 2456678999998555 31 2348888763 654332 222211 2
Q ss_pred cccCceeCCCCcEEEEEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeE
Q 004816 299 SPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS 378 (729)
Q Consensus 299 ~~~~~~wspDG~l~~~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~ 378 (729)
....+.+++||++++.... ...+++.+|+++.....+.-.. ....+.. ......+++ +++ ++++.. +..
T Consensus 78 ~~~~~~~~~dG~~lv~~~~--~~~~v~~vd~~Gk~l~~~~~~~-~~~~~~~--~~~~v~~~~---~G~-~lv~~~--~~~ 146 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCG--HPSTILEVNMKGEVLSKTEFET-GIERPHA--QFRQINKNK---KGN-YLVPLF--ATS 146 (276)
T ss_dssp EEEEEEECTTSCEEEEEES--TTEEEEEECTTSCEEEEEEECC-SCSSGGG--SCSCCEECT---TSC-EEEEET--TTT
T ss_pred cccccEECCCCCEEEEecC--CCCEEEEEeCCCCEEEEEeccC-CCCcccc--cccCceECC---CCC-EEEEec--CCC
Confidence 3345678999995554332 2467888998665444443111 1111111 011223332 444 444443 334
Q ss_pred EEEEEECCCCceEeeccCCcceEEeeeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 379 YLGILDDFGHSLSLLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 379 ~ly~~d~~~g~~~~lt~~~~~v~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
.|+.+|.+++.+..+..+..........++.+++..... ..++.+|.++|+.
T Consensus 147 ~v~~~d~~G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~---~~v~~~d~~tG~~ 198 (276)
T 3no2_A 147 EVREIAPNGQLLNSVKLSGTPFSSAFLDNGDCLVACGDA---HCFVQLNLESNRI 198 (276)
T ss_dssp EEEEECTTSCEEEEEECSSCCCEEEECTTSCEEEECBTT---SEEEEECTTTCCE
T ss_pred EEEEECCCCCEEEEEECCCCccceeEcCCCCEEEEeCCC---CeEEEEeCcCCcE
Confidence 688889985555565544333222233445555544332 3689999887763
No 493
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.67 E-value=0.0078 Score=61.03 Aligned_cols=148 Identities=8% Similarity=0.024 Sum_probs=82.7
Q ss_pred CEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceE
Q 004816 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (729)
Q Consensus 155 ~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~ 234 (729)
+.|++++...++|++++.++ +....+. . .......+++|||+ | |+.+.... ...|++++..+|+.+
T Consensus 43 g~lyv~d~~~~~I~~~d~~g--~~~~~~~-~----~~~p~gia~~~dG~-l-~vad~~~~-----~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 43 GTIFVTNHEVGEIVSITPDG--NQQIHAT-V----EGKVSGLAFTSNGD-L-VATGWNAD-----SIPVVSLVKSDGTVE 108 (306)
T ss_dssp SCEEEEETTTTEEEEECTTC--CEEEEEE-C----SSEEEEEEECTTSC-E-EEEEECTT-----SCEEEEEECTTSCEE
T ss_pred CCEEEEeCCCCeEEEECCCC--ceEEEEe-C----CCCceeEEEcCCCc-E-EEEeccCC-----cceEEEEcCCCCeEE
Confidence 35777776778999999875 4333322 2 23456788999999 4 33332110 135899998888887
Q ss_pred EeeeC--CCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecC------CCCCccccccCceeC
Q 004816 235 VLVSG--SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG------FDPTIVESPTEPKWS 306 (729)
Q Consensus 235 ~lt~~--~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~------~~~~~~~~~~~~~ws 306 (729)
.+... ..+..+++..+++ .+++... ....||++|.. +++.. +..... .... ......+ +
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~-~~~v~d~-------~~g~i~~~d~~-~~~~~-v~~~~~~~~~~~~~~~-~~~pngi--s 175 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDT-QYLTADS-------YRGAIWLIDVV-QPSGS-IWLEHPMLARSNSESV-FPAANGL--K 175 (306)
T ss_dssp EEEECTTCSCEEEEEESSSS-EEEEEET-------TTTEEEEEETT-TTEEE-EEEECGGGSCSSTTCC-SCSEEEE--E
T ss_pred EEEeCCCccccCcccccCCC-cEEEEEC-------CCCeEEEEeCC-CCcEe-EEEECCccccccccCC-CCcCCCc--C
Confidence 66542 2334556655554 4544431 13469999976 44211 111110 0000 0111223 7
Q ss_pred CCCcEEEEEecCCCceEEEEEEcCC
Q 004816 307 SKGELFFVTDRKNGFWNLHKWIESN 331 (729)
Q Consensus 307 pDG~l~~~~~~~~g~~~l~~~d~~~ 331 (729)
+||+.+|+++. +...|+++++++
T Consensus 176 ~dg~~lyv~d~--~~~~I~~~~~~~ 198 (306)
T 2p4o_A 176 RFGNFLYVSNT--EKMLLLRIPVDS 198 (306)
T ss_dssp EETTEEEEEET--TTTEEEEEEBCT
T ss_pred cCCCEEEEEeC--CCCEEEEEEeCC
Confidence 88885555554 446788998865
No 494
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.66 E-value=0.00058 Score=72.37 Aligned_cols=66 Identities=18% Similarity=0.040 Sum_probs=43.2
Q ss_pred CEEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce
Q 004816 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (729)
Q Consensus 155 ~~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~ 233 (729)
++++.+...++.|.+||+.++ +....+... ...+...+|+|++..++.+...+ ..|.++|+.+++.
T Consensus 156 ~~~las~s~D~tv~~Wd~~~~-~~~~~~~~~----~~~v~~v~~~p~~~~~l~~~~~d--------~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 156 EQVIASVGDDCTLIIWRLTDE-GPILAGYPL----SSPGISVQFRPSNPNQLIVGERN--------GNIRIFDWTLNLS 221 (393)
T ss_dssp EEEEEEEETTSEEEEEEEETT-EEEEEEEEC----SSCEEEEEEETTEEEEEEEEETT--------SEEEEEETTCCC-
T ss_pred CCEEEEEECCCeEEEEECCCC-ceeeeecCC----CCCcEEEEECCCCCceEEecCCC--------CEEEEEECCCCcc
Confidence 467777778889999998751 222333322 23456788999997655555433 4688889887653
No 495
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=97.65 E-value=0.00018 Score=76.99 Aligned_cols=136 Identities=12% Similarity=0.102 Sum_probs=81.0
Q ss_pred EEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEEcCCCCCCccccch-h---------------hhHHHhhCCcEE
Q 004816 461 IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN-L---------------SIQYWTSRGWAF 524 (729)
Q Consensus 461 ~~~~~~~dG~~l~~~l~~P~~~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~-~---------------~~~~la~~G~~v 524 (729)
-.+... ++..+..|++...+ ..+..|+||++||||++......- . .-..| .+-.++
T Consensus 24 Gyv~v~-~~~~lfy~f~~s~~------~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw-~~~~~~ 95 (452)
T 1ivy_A 24 GYLKSS-GSKHLHYWFVESQK------DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSW-NLIANV 95 (452)
T ss_dssp EEEECS-TTEEEEEEEECCSS------CGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCG-GGSSEE
T ss_pred EEEeeC-CCCeEEEEEEEcCC------CCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcc-cccccE
Confidence 344444 57889988886543 134579999999999875432110 0 00011 234789
Q ss_pred EEecCCCCCCCchhHHHhhccCCCcc---cHHHHH-HHHHHHHhCCCCCCCcEEEEEcChHHHHHHHHHh-----CCCcc
Q 004816 525 VDVNYGGSTGYGREFRERLLGRWGIV---DVNDCC-SCATFLVGSGKADEKRLCITGGSAGGYTTLAALA-----FRDTF 595 (729)
Q Consensus 525 ~~~d~rGs~g~g~~~~~~~~~~~~~~---~~~D~~-~~~~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-----~~~~~ 595 (729)
+.+|.+-+.|+... . ...+... ...|+. ...+|+...+.....++.|+|+|+||..+-.++. .+-.+
T Consensus 96 lfiDqP~GtGfS~~--~--~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l 171 (452)
T 1ivy_A 96 LYLESPAGVGFSYS--D--DKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNL 171 (452)
T ss_dssp EEECCSTTSTTCEE--S--SCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCE
T ss_pred EEEecCCCCCcCCc--C--CCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCcccc
Confidence 99996433343321 1 1112111 234443 3444555544455689999999999996655543 35678
Q ss_pred eEEEEeccccChh
Q 004816 596 KAGASLYGVADLS 608 (729)
Q Consensus 596 ~a~v~~~~~~d~~ 608 (729)
+++++.+|+.|..
T Consensus 172 ~g~~ign~~~d~~ 184 (452)
T 1ivy_A 172 QGLAVGNGLSSYE 184 (452)
T ss_dssp EEEEEESCCSBHH
T ss_pred ceEEecCCccChh
Confidence 9999999988753
No 496
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.63 E-value=0.012 Score=58.84 Aligned_cols=226 Identities=10% Similarity=0.031 Sum_probs=121.1
Q ss_pred EEEEEECCCCcEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCceEE
Q 004816 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQV 235 (729)
Q Consensus 156 ~i~~~~~~~~~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~~~ 235 (729)
.+++.....+.|++++.++ +...+.... .........++++|+. ++. ... ...|++++.+ ++.+.
T Consensus 32 ~l~v~~~~~~~v~~~~~~~---~~~~~~~~~--~~~~~~~i~~~~~g~l-~v~-~~~-------~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 32 KVWFTQHKANKISSLDQSG---RIKEFEVPT--PDAKVMCLIVSSLGDI-WFT-ENG-------ANKIGKLSKK-GGFTE 96 (300)
T ss_dssp CEEEEETTTTEEEEECTTS---CEEEEECSS--TTCCEEEEEECTTSCE-EEE-ETT-------TTEEEEECTT-SCEEE
T ss_pred CEEEEcCCCCeEEEECCCC---ceEEEECCC--CCCcceeEEECCCCCE-EEE-ecC-------CCeEEEECCC-CCeEE
Confidence 4556655567899998763 333332111 0134467788999983 333 321 2469999988 66654
Q ss_pred eee--CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEE
Q 004816 236 LVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFF 313 (729)
Q Consensus 236 lt~--~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~ 313 (729)
+.. ......+..++|||+ |++... ....|++++.+ ++.... ...... .....+.+++||++++
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~-l~v~~~-------~~~~i~~~~~~--g~~~~~-~~~~~~----~~~~~i~~d~~g~l~v 161 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGD-IWFTQL-------NGDRIGKLTAD--GTIYEY-DLPNKG----SYPAFITLGSDNALWF 161 (300)
T ss_dssp EECSSTTCCEEEEEECSTTC-EEEEET-------TTTEEEEECTT--SCEEEE-ECSSTT----CCEEEEEECTTSSEEE
T ss_pred ecCCCCCCCCccceECCCCC-EEEEcc-------CCCeEEEECCC--CCEEEc-cCCCCC----CCceeEEECCCCCEEE
Confidence 432 223455678899987 555442 13458888765 544221 122222 3445678889998655
Q ss_pred EEecCCCceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCCceEee
Q 004816 314 VTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 393 (729)
Q Consensus 314 ~~~~~~g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g~~~~l 393 (729)
... +...|+++++ +++...+.. ...... ...+.+. .++.+|+.... ...|++++. +++...+
T Consensus 162 ~~~---~~~~i~~~~~-~g~~~~~~~-~~~~~~------~~~i~~d----~~g~l~v~~~~--~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 162 TEN---QNNSIGRITN-TGKLEEYPL-PTNAAA------PVGITSG----NDGALWFVEIM--GNKIGRITT-TGEISEY 223 (300)
T ss_dssp EET---TTTEEEEECT-TCCEEEEEC-SSTTCC------EEEEEEC----TTSSEEEEETT--TTEEEEECT-TCCEEEE
T ss_pred Eec---CCCeEEEECC-CCcEEEeeC-CCCCCC------cceEEEC----CCCCEEEEccC--CCEEEEEcC-CCcEEEE
Confidence 543 2346899998 565554431 111111 1123332 34456665432 336888888 4555444
Q ss_pred cc--CCcceEEe-eeeCCEEEEEEeCCCCCceEEEEEcCCCcc
Q 004816 394 DI--PFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 433 (729)
Q Consensus 394 t~--~~~~v~~~-~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~ 433 (729)
.. .......+ ...++.+++... ....|++++. .++.
T Consensus 224 ~~~~~~~~~~~i~~d~~g~l~v~~~---~~~~i~~~~~-~g~~ 262 (300)
T 2qc5_A 224 DIPTPNARPHAITAGKNSEIWFTEW---GANQIGRITN-DNTI 262 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEET---TTTEEEEECT-TSCE
T ss_pred ECCCCCCCceEEEECCCCCEEEecc---CCCeEEEECC-CCcE
Confidence 32 23345555 333445444332 1346888887 3443
No 497
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.61 E-value=0.005 Score=60.23 Aligned_cols=213 Identities=11% Similarity=0.230 Sum_probs=118.2
Q ss_pred HhccCCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEEC-CEEEEEE
Q 004816 84 VSGASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG-DTVIFSN 161 (729)
Q Consensus 84 i~~~~~~~~~~~~~p-g~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~ 161 (729)
|-.....++++.++| ++.+|.+..++ -.|+..+.. |+...-++... ...+ ..+++.+ +.++++.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~-----~~I~~ld~~--g~v~~~i~l~g-----~~D~--EGIa~~~~g~~~vs~ 87 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKP-----AAIVEMTTN--GDLIRTIPLDF-----VKDL--ETIEYIGDNQFVISD 87 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETT-----EEEEEEETT--CCEEEEEECSS-----CSSE--EEEEECSTTEEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCC-----CeEEEEeCC--CCEEEEEecCC-----CCCh--HHeEEeCCCEEEEEE
Confidence 334445689999999 78888877542 247777766 33322221110 0011 1233333 3555666
Q ss_pred CCCCcEEEEeCCCCCCCC---eecCC--CCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEE--cCCCceE
Q 004816 162 YKDQRLYKHSIDSKDSSP---LPITP--DYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA--LNGQNIQ 234 (729)
Q Consensus 162 ~~~~~l~~~d~~~~~~~~---~~lt~--~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~d--l~~g~~~ 234 (729)
+..++|++++++.. +.. ..+.- ........+...+|+|++++|+.+.+..+ ..||.++ +.+...+
T Consensus 88 E~~~~l~~~~v~~~-~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p-------~~i~~~~g~~~~~~l~ 159 (255)
T 3qqz_A 88 ERDYAIYVISLTPN-SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP-------IEVYKVNGLLSSNELH 159 (255)
T ss_dssp TTTTEEEEEEECTT-CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS-------EEEEEEESTTCSSCCE
T ss_pred CCCCcEEEEEcCCC-CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC-------ceEEEEcccccCCcee
Confidence 67778999887652 221 11211 00011233567899999999887776542 4799888 2222233
Q ss_pred Eeee-------CCCeeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEec-CCCC--CccccccCce
Q 004816 235 VLVS-------GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA-GFDP--TIVESPTEPK 304 (729)
Q Consensus 235 ~lt~-------~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~-~~~~--~~~~~~~~~~ 304 (729)
.+.. ......+.++.|.-.+|+.++ +.. ..|..+|.+ |+......+. +... ........++
T Consensus 160 i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS-~~s------~~L~~~d~~--g~~~~~~~L~~g~~~l~~~~~qpEGia 230 (255)
T 3qqz_A 160 ISKDKALQRQFTLDDVSGAEFNQQKNTLLVLS-HES------RALQEVTLV--GEVIGEMSLTKGSRGLSHNIKQAEGVA 230 (255)
T ss_dssp EEECHHHHHTCCSSCCCEEEEETTTTEEEEEE-TTT------TEEEEECTT--CCEEEEEECSTTGGGCSSCCCSEEEEE
T ss_pred eecchhhccccccCCceeEEEcCCCCeEEEEE-CCC------CeEEEEcCC--CCEEEEEEcCCccCCcccccCCCCeeE
Confidence 3311 112346778999888888887 433 448888865 5543333333 2110 0001335678
Q ss_pred eCCCCcEEEEEecCCCceEEEEEEcCC
Q 004816 305 WSSKGELFFVTDRKNGFWNLHKWIESN 331 (729)
Q Consensus 305 wspDG~l~~~~~~~~g~~~l~~~d~~~ 331 (729)
+.++|+||.++.. ..+|++....
T Consensus 231 ~d~~G~lyIvsE~----n~~y~f~~~~ 253 (255)
T 3qqz_A 231 MDASGNIYIVSEP----NRFYRFTPQS 253 (255)
T ss_dssp ECTTCCEEEEETT----TEEEEEEC--
T ss_pred ECCCCCEEEEcCC----ceEEEEEecC
Confidence 9999987766543 3677776543
No 498
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.58 E-value=0.11 Score=57.76 Aligned_cols=61 Identities=18% Similarity=0.172 Sum_probs=35.7
Q ss_pred cEEEEEEecCCCCeeeeEEecCCCCCccc-cccCceeC---CCCc---EEEEEecCCCceEEEEEEcCCCeEE
Q 004816 270 AELWVGYISENGDVYKRVCVAGFDPTIVE-SPTEPKWS---SKGE---LFFVTDRKNGFWNLHKWIESNNEVL 335 (729)
Q Consensus 270 ~~l~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~~ws---pDG~---l~~~~~~~~g~~~l~~~d~~~g~~~ 335 (729)
..|+.+|.+ +|+..+.......+ .|.. ....|... .||+ +++.... +| .|+.+|.++|+..
T Consensus 272 ~~v~Ald~~-tG~~~W~~~~~~~d-~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~-~G--~l~~lD~~tG~~~ 339 (571)
T 2ad6_A 272 MTIWGRDLD-TGMAKWGYQKTPHD-EWDFAGVNQMVLTDQPVNGKMTPLLSHIDR-NG--ILYTLNRENGNLI 339 (571)
T ss_dssp TEEEEEETT-TCCEEEEEESSTTC-SSCCCCCCCCEEEEEEETTEEEEEEEEECT-TS--EEEEEETTTCCEE
T ss_pred EEEEEEecC-CCcEEEEecCCCCc-ccccccCCCCEEEecccCCcEEEEEEEeCC-Cc--EEEEEECCCCCEE
Confidence 469999998 88876654443322 1101 12344443 3674 4444444 33 6899999888754
No 499
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.58 E-value=0.0094 Score=63.75 Aligned_cols=268 Identities=9% Similarity=0.002 Sum_probs=0.0
Q ss_pred EEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcccccccccCCceEEEECCEEEEEECCCCcEEEEeCCC
Q 004816 95 AVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKHSIDS 174 (729)
Q Consensus 95 ~~~pg~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~d~~~ 174 (729)
.+++++....+.. .+|...+|..... +....+... ...+.++.+ ++.++++...++.|.+||+.+
T Consensus 138 ~~~~d~~~l~~g~---~dg~i~iwd~~~~---~~~~~~~~h--------~~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 138 CLQYDDQKIVSGL---RDNTIKIWDKNTL---ECKRILTGH--------TGSVLCLQY-DERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp EEECCSSEEEEEE---SSSCEEEEESSSC---CEEEEECCC--------SSCEEEEEC-CSSEEEEEETTSCEEEEESSS
T ss_pred EEEECCCEEEEEe---CCCeEEEEeCCCC---eEEEEEcCC--------CCcEEEEEE-CCCEEEEEcCCCeEEEEECCC
Q ss_pred CCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCce----EEeeeCCCeeeeeeeCC
Q 004816 175 KDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI----QVLVSGSDFYAFPRMDP 250 (729)
Q Consensus 175 ~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~~----~~lt~~~~~~~~~~~SP 250 (729)
+ .....+... ...+....|+++ .+++...+ ..|.++|+.+++. ..+...........|
T Consensus 203 ~-~~~~~~~~h----~~~v~~l~~~~~---~l~s~s~d--------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-- 264 (435)
T 1p22_A 203 G-EMLNTLIHH----CEAVLHLRFNNG---MMVTCSKD--------RSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 264 (435)
T ss_dssp C-CEEEEECCC----CSCEEEEECCTT---EEEEEETT--------SCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--
T ss_pred C-cEEEEEcCC----CCcEEEEEEcCC---EEEEeeCC--------CcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--
Q ss_pred CCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCc-EEEEEecCCCceEEEEEEc
Q 004816 251 RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIE 329 (729)
Q Consensus 251 DG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~-l~~~~~~~~g~~~l~~~d~ 329 (729)
||+.|+..+ ....|.++|+. +++. ...+.+.. ..+..+.| +++ ++....+ ..|.++|.
T Consensus 265 ~~~~l~s~~--------~dg~i~vwd~~-~~~~--~~~~~~~~----~~v~~~~~--~~~~l~~g~~d----g~i~iwd~ 323 (435)
T 1p22_A 265 DDKYIVSAS--------GDRTIKVWNTS-TCEF--VRTLNGHK----RGIACLQY--RDRLVVSGSSD----NTIRLWDI 323 (435)
T ss_dssp ETTEEEEEE--------TTSEEEEEETT-TCCE--EEEEECCS----SCEEEEEE--ETTEEEEEETT----SCEEEEET
T ss_pred CCCEEEEEe--------CCCeEEEEECC-cCcE--EEEEcCCC----CcEEEEEe--CCCEEEEEeCC----CeEEEEEC
Q ss_pred CCCeEEEee-ccCccccCCcccccCcceeeeeecCCCCEEEEEEEECCeEEEEEEECCCC--------ceEeeccCCcce
Q 004816 330 SNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGH--------SLSLLDIPFTDI 400 (729)
Q Consensus 330 ~~g~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g~~~ly~~d~~~g--------~~~~lt~~~~~v 400 (729)
.+++..... .....+....|. +.++++...+|...+|-+..... ....+......+
T Consensus 324 ~~~~~~~~~~~h~~~v~~~~~~---------------~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v 388 (435)
T 1p22_A 324 ECGACLRVLEGHEELVRCIRFD---------------NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 388 (435)
T ss_dssp TTCCEEEEECCCSSCEEEEECC---------------SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCC
T ss_pred CCCCEEEEEeCCcCcEEEEEec---------------CCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCe
Q ss_pred EEeeeeCCEEEEEEeCCCCCceEEEEEcCCCccee
Q 004816 401 DNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKA 435 (729)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~ly~~d~~~~~~~~ 435 (729)
..+.. ++..++.++... .+..+|+.++....
T Consensus 389 ~~l~~-~~~~l~s~s~Dg---~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 389 FRLQF-DEFQIVSSSHDD---TILIWDFLNDPAAQ 419 (435)
T ss_dssp CCEEE-CSSCEEECCSSS---EEEEEC--------
T ss_pred EEEEe-CCCEEEEEeCCC---EEEEEECCCCCCcc
No 500
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.56 E-value=0.0091 Score=60.28 Aligned_cols=241 Identities=5% Similarity=-0.150 Sum_probs=128.4
Q ss_pred cEEEEeCCCCCCCCeecCCCCCCCceeeecceecCCCCEEEEEEeccCCCCCCcceEEEEEEcCCCc---eEEeeeCCC-
Q 004816 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN---IQVLVSGSD- 241 (729)
Q Consensus 166 ~l~~~d~~~~~~~~~~lt~~~~~~~~~~~~~~~SPdG~~l~~~~~~~~~~~~~~~~~l~~~dl~~g~---~~~lt~~~~- 241 (729)
+++.+|+.+ ++-+.+...+ ..+.......-+++ |+.+..... ......++++|+.+++ -+.+..-+.
T Consensus 32 ~~~~~d~~~--~~W~~~~~~p---~~r~~~~~~~~~~~-l~v~GG~~~---~~~~~~~~~~d~~~~~~~~W~~~~~~p~~ 102 (301)
T 2vpj_A 32 VVEKYDPKT--QEWSFLPSIT---RKRRYVASVSLHDR-IYVIGGYDG---RSRLSSVECLDYTADEDGVWYSVAPMNVR 102 (301)
T ss_dssp CEEEEETTT--TEEEECCCCS---SCCBSCEEEEETTE-EEEECCBCS---SCBCCCEEEEETTCCTTCCCEEECCCSSC
T ss_pred EEEEEcCCC--CeEEeCCCCC---hhhccccEEEECCE-EEEEcCCCC---CccCceEEEEECCCCCCCeeEECCCCCCC
Confidence 689999987 6666665432 12222223333444 444322211 1124679999999988 777754221
Q ss_pred eeeeeeeCCCCCeEEEEEecCCCCCCCCcEEEEEEecCCCCeeeeEEecCCCCCccccccCceeCCCCcEEEEEecCC--
Q 004816 242 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKN-- 319 (729)
Q Consensus 242 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~l~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~wspDG~l~~~~~~~~-- 319 (729)
....-...-++ +|+......... ...+++++|+. +.+.......+.. .. ......-+++||+......
T Consensus 103 r~~~~~~~~~~-~lyv~GG~~~~~--~~~~~~~~d~~-~~~W~~~~~~p~~-----r~-~~~~~~~~~~iyv~GG~~~~~ 172 (301)
T 2vpj_A 103 RGLAGATTLGD-MIYVSGGFDGSR--RHTSMERYDPN-IDQWSMLGDMQTA-----RE-GAGLVVASGVIYCLGGYDGLN 172 (301)
T ss_dssp CBSCEEEEETT-EEEEECCBCSSC--BCCEEEEEETT-TTEEEEEEECSSC-----CB-SCEEEEETTEEEEECCBCSSC
T ss_pred ccceeEEEECC-EEEEEcccCCCc--ccceEEEEcCC-CCeEEECCCCCCC-----cc-cceEEEECCEEEEECCCCCCc
Confidence 11111222244 465554222111 24579999988 6655333222211 11 1222234677665543311
Q ss_pred CceEEEEEEcCCCeEEEeeccCccccCCcccccCcceeeeeecCCCCEEEEEEEECC---eEEEEEEECCCCceEeeccC
Q 004816 320 GFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG---RSYLGILDDFGHSLSLLDIP 396 (729)
Q Consensus 320 g~~~l~~~d~~~g~~~~l~~~~~~~~~~~w~~~~~~~~~l~~~~~~~~l~~~s~~~g---~~~ly~~d~~~g~~~~lt~~ 396 (729)
....++++|+.+++.+.+.+... +... ..... -++.||+....++ ...++.+|+++.+++.+...
T Consensus 173 ~~~~~~~~d~~~~~W~~~~~~p~----~r~~---~~~~~-----~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 240 (301)
T 2vpj_A 173 ILNSVEKYDPHTGHWTNVTPMAT----KRSG---AGVAL-----LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM 240 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSS----CCBS---CEEEE-----ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred ccceEEEEeCCCCcEEeCCCCCc----cccc---ceEEE-----ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC
Confidence 13569999999999988853321 1110 11122 2345555543322 35799999999999888643
Q ss_pred Ccc--eEEeeeeCCEEEEEEeCCCCC--ceEEEEEcCCCcceeee
Q 004816 397 FTD--IDNITLGNDCLFVEGASGVEP--SSVAKVTLDDHKLKAVD 437 (729)
Q Consensus 397 ~~~--v~~~~~~~~~~~~~~~~~~~~--~~ly~~d~~~~~~~~lt 437 (729)
... ......-++.++++.+..... ..++.+|+++.+.+++.
T Consensus 241 p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 241 TTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp SSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred CCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcC
Confidence 211 112233366777776544332 45899999888876654
Done!