BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004824
(728 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3
pdb|3I6S|B Chain B, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3
pdb|3I74|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3 In Complex With A Chloromethylketone Inhibitor
pdb|3I74|B Chain B, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3 In Complex With A Chloromethylketone Inhibitor
Length = 649
Score = 572 bits (1474), Expect = e-163, Method: Compositional matrix adjust.
Identities = 315/656 (48%), Positives = 434/656 (66%), Gaps = 24/656 (3%)
Query: 83 TTHTSEFLGLSSLSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMS 142
TTHTS+FL L+ SG WPAS G+ VI+ ++D+GIWPES SF D+GM ++P RWKG C
Sbjct: 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKP 60
Query: 143 GVQFNSSLCNKKLIGARFFNKGLIANNPKLKVRMNSPRDGSGHGTHTSSIAAGNYVKGSS 202
G QFN+S+CN+KLIGA +FNKG++AN+P + + MNS RD GHGTH +SI AGN+ KG S
Sbjct: 61 GTQFNASMCNRKLIGANYFNKGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVS 120
Query: 203 YFGYATGIARGIAPRACVAMYKAIWRHGVYSSDVVAAIDQALQXXXXXXXXXXXXXXNGI 262
+FGYA G ARG+APRA +A+YK + G ++SD++AA+DQA+ I
Sbjct: 121 HFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMDQAVADGVDMISISYGYRF--I 178
Query: 263 FLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTL 322
L +DAI++A+F AM KGVLV ASAGN GP +L NG+PW+L V +G DR F G+LTL
Sbjct: 179 PLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTL 238
Query: 323 GNGVQINFKSLYPGNS----SPSQVSLAFMDACDSVTELKKV---INSIVVCREDSSISS 375
GNG++I SL+P + SP + D C S L +V N+IV+C ++ S
Sbjct: 239 GNGLKIRGWSLFPARAFVRDSPVIYNKTLSD-CSSEELLSQVENPENTIVICDDNGDFSD 297
Query: 376 QIDNAVAAGVLGAVFISNSALLEVYIRSSF--PAAFINVNDGQTIIDYIKKCDNPTGSLQ 433
Q+ A + A+FIS V+ ++F P +N +G+ +I+Y+K PT ++
Sbjct: 298 QMRIITRARLKAAIFISEDP--GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATIT 355
Query: 434 FRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLY 493
F++T + TKPAP+V + S+RGP S I KPDILAPG L+LA++ P + + +L
Sbjct: 356 FQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILL 415
Query: 494 S-NFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNN 552
S ++ L SGTSMA PH AG+A +LKAAHP+WSP+AIRSA++TTA PLDNT IKD S+N
Sbjct: 416 STDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKD-SDN 474
Query: 553 NFPASPLDMGAGHINPNKALDPGLVYDATAEDYIKLLCAMNYKPEQIRIFTKS--SQKCN 610
N A+PLDMGAGH++PN+ALDPGLVYDAT +DY+ LLC++N+ EQ + +S S C+
Sbjct: 475 NKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCS 534
Query: 611 NRSLDLNYPSFITFFNDYDSSSDEKVVKEFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEP 670
N S DLNYPSFI ++ + + + ++F RTVTN + Y AKL + V P
Sbjct: 535 NPSADLNYPSFIALYSIEGNFT--LLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSP 592
Query: 671 RRLVFKQKYEKQSYKLTLE--GPKLLEKDVVYGSISWVDDDGRYEVRSPIVATNLV 724
+ LVFK K EKQSY LT+ G + ++V GSI+WV+ +G + VRSPIV + ++
Sbjct: 593 QILVFKNKNEKQSYTLTIRYIGDEGQSRNV--GSITWVEQNGNHSVRSPIVTSPII 646
>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like
Endoprotease From Cucumis Melo L
pdb|3VTA|B Chain B, Crystal Structure Of Cucumisin, A Subtilisin-Like
Endoprotease From Cucumis Melo L
Length = 621
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 232/634 (36%), Positives = 335/634 (52%), Gaps = 53/634 (8%)
Query: 108 VIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIA 167
+++G++DTGIWPES SF DEG + PP+WKG C + F CN+K+IGAR ++ G
Sbjct: 24 IVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSYHIG--- 77
Query: 168 NNPKLKVRMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIW 227
P +N PRD +GHGTHT+S AAG V ++ +G G ARG P A +A YK W
Sbjct: 78 -RPISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCW 136
Query: 228 RHGVYSSDVVAAIDQALQXXXXXXXXXXXXXXNGIFLEDDAIAVATFAAMEKGVLVVASA 287
G +D++AA D A+ + DAIA+ +F A+E+G+L SA
Sbjct: 137 NDGCSDTDILAAYDDAIADGVDIISLSVGGANPRHYFV-DAIAIGSFHAVERGILTSNSA 195
Query: 288 GNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLGN-----GVQIN-FKSLYPGNSSPS 341
GN GP+++T + +PWLL+V A T+DR+F + +GN GV IN F + Y S
Sbjct: 196 GNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSINTFDNQYYPLVSGR 255
Query: 342 QVSLAFMDACDSVTELKKVIN------SIVVCREDSSISSQIDNAVAAGVLGAVFISNSA 395
+ D S K +N IVVC ++S G G + SN+
Sbjct: 256 DIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVC--EASFGPHEFFKSLDGAAGVLMTSNT- 312
Query: 396 LLEVYIRS-SFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRG 454
Y S P++ ++ ND + YI +P G+ F+ T I AP+V S+SSRG
Sbjct: 313 --RDYADSYPLPSSVLDPNDLLATLRYIYSIRSP-GATIFKSTTILNASAPVVVSFSSRG 369
Query: 455 PFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAG 514
P + ++ KPDI PG +LA+W ++ V ++ L FN++SGTSM+ PH+ G+A
Sbjct: 370 PNRATKDVIKPDISGPGVEILAAWPSVAPVGGIRRNTL---FNIISGTSMSCPHITGIAT 426
Query: 515 LLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPNKALDP 574
+K +P WSPAAI+SAL+TTASP++ + P + G+GH+NP KA+ P
Sbjct: 427 YVKTYNPTWSPAAIKSALMTTASPMNARFN----------PQAEFAYGSGHVNPLKAVRP 476
Query: 575 GLVYDATAEDYIKLLCAMNYKPEQIRIFTKSSQKCNN----RSLDLNYPSFITFFNDYDS 630
GLVYDA DY+K LC Y + +R T C + R DLNYPSF
Sbjct: 477 GLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSF-----GLSV 531
Query: 631 SSDEKVVKEFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEG 690
S + + F RT+T+ + Y A ++ GL + V P L F +++S+ LT+ G
Sbjct: 532 SPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRG 591
Query: 691 PKLLEKDVVYGSISWVDDDGRYEVRSPIVATNLV 724
++ VV S+ W DG + VRSPI T+LV
Sbjct: 592 S--IKGFVVSASLVW--SDGVHYVRSPITITSLV 621
>pdb|3AFG|A Chain A, Crystal Structure Of Pron-Tk-Sp From Thermococcus
Kodakaraensis
pdb|3AFG|B Chain B, Crystal Structure Of Pron-Tk-Sp From Thermococcus
Kodakaraensis
Length = 539
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 59/91 (64%), Gaps = 6/91 (6%)
Query: 446 MVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMA 505
++ +SSRGP + N KP+++APG+ ++A+ + +S+ + + + GT+MA
Sbjct: 308 VITDFSSRGP--TADNRLKPEVVAPGNWIIAARASGTSMGQ----PINDYYTAAPGTAMA 361
Query: 506 TPHVAGVAGLLKAAHPDWSPAAIRSALVTTA 536
TPHVAG+A LL AHP W+P +++AL+ TA
Sbjct: 362 TPHVAGIAALLLQAHPSWTPDKVKTALIETA 392
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 178 SPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGVYS-SDV 236
+P D +GHGTH +SIAAG G++ + G +G+AP A + K + G S SD+
Sbjct: 173 TPYDDNGHGTHVASIAAGT---GAA----SNGKYKGMAPGAKLVGIKVLNGQGSGSISDI 225
Query: 237 VAAIDQALQXXXXXXXXXXXXXXNGIFLED--DAIAVATFAAMEKGVLVVASAGNDGPSY 294
+ +D A+Q D D+++ A A + G++VV +AGN GP+
Sbjct: 226 INGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNK 285
Query: 295 WTLINGAPWLLTVGAGTIDR 314
+T+ + A + G +D+
Sbjct: 286 YTVGSPAAASKVITVGAVDK 305
>pdb|3EIF|A Chain A, 1.9 Angstrom Crystal Structure Of The Active Form Of The
C5a Peptidase From Streptococcus Pyogenes (Scpa)
Length = 936
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 167/423 (39%), Gaps = 71/423 (16%)
Query: 185 HGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGV--YSSDVVAAIDQ 242
HGTH S I +GN + Y G P A + + + +G+ Y+ + AI
Sbjct: 97 HGTHVSGILSGN-APSETKEPYRL---EGAMPEAQLLLMRVEIVNGLADYARNYAQAIRD 152
Query: 243 ALQXXXXXXXXXXXXXXNGIFLEDDAIAVATFAAMEKGVLVVASAGNDG----------- 291
A+ D A A KGV +V SAGND
Sbjct: 153 AVNLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLA 212
Query: 292 --PSYWTLINGAPW----LLTVGAGTIDREFEGSLTL--GNGVQINFKSLYPGNSSPSQV 343
P Y + G P LTV + + D++ + T+ + L P++
Sbjct: 213 DHPDYGVV--GTPAAADSTLTVASYSPDKQLTETATVKTDDHQAKEMPVLSTNRFEPNKA 270
Query: 344 -SLAFMDACDSVTELKKVINSI-VVCREDSSISSQIDNAVAAGVLGAVFISNSAL---LE 398
A+ + + K V I ++ R D +I NA AG +G + N +E
Sbjct: 271 YDYAYANRGMKEDDFKDVKGKIALIERGDIDFKDKIANAKKAGAVGVLIYDNQDKGFPIE 330
Query: 399 VYIRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKT--VIGTKPAPMVDSYSSRGPF 456
+ PAAFI+ DG + D KK ++ F T V+ T + +SS G
Sbjct: 331 LPNVDQMPAAFISRKDGLLLKDNSKK------TITFNATPKVLPTASDTKLSRFSSWG-- 382
Query: 457 LSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLL 516
L+ KPDI APG +L SSVA + + +SGTSM+ P VAG+ GLL
Sbjct: 383 LTADGNIKPDIAAPGQDIL------SSVAN-------NKYAKLSGTSMSAPLVAGIMGLL 429
Query: 517 K----AAHPDWSPAA----IRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINP 568
+ +PD +P+ + L+++A+ L + + SP GAG ++
Sbjct: 430 QKQYETQYPDMTPSERLDLAKKVLMSSATALYD--------EDEKAYFSPRQQGAGAVDA 481
Query: 569 NKA 571
KA
Sbjct: 482 KKA 484
>pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam
Length = 266
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R PF S P+ D++APG + S L + +SGTSMA+
Sbjct: 171 VDSSNQRAPFSSVG--PELDVMAPG-------------VSICSTLPGGKYGALSGTSMAS 215
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L TA+ L ++ + K
Sbjct: 216 PHVAGAAALILSKHPNWTNTQVRSSLENTATKLGDSFYYGK 256
>pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam
pdb|3BGO|S Chain S, Azide Complex Of Engineered Subtilisin Subt_bacam
pdb|3CO0|S Chain S, Substrate Complex Of Fluoride-Sensitive Engineered
Subtilisin Subt_bacam
Length = 266
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R PF S P+ D++APG + S L + +SGT+MA+
Sbjct: 171 VDSSNQRAPFSSVG--PELDVMAPG-------------VSICSTLPGGKYGALSGTAMAS 215
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L TA+ L ++ + K
Sbjct: 216 PHVAGAAALILSKHPNWTNTQVRSSLENTATKLGDSFYYGK 256
>pdb|1AK9|A Chain A, Subtilisin Mutant 8321
Length = 275
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG +QS L + + SGTSMA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIQSTLPGNKYGAKSGTSMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|2SNI|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG +QS L + + +GTSMA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIQSTLPGNKYGAYNGTSMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLQNTTTKLGDSFYYGK 265
>pdb|2SBT|A Chain A, A Comparison Of The Three-Dimensional Structures Of
Subtilisin Bpn And Subtilisin Novo
pdb|1SBT|A Chain A, Atomic Coordinates For Subtilisin Bpn (Or Novo)
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG +QS L + + +GTSMA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIQSTLPGNKYGAYNGTSMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLQNTTTKLGDSFYYGK 265
>pdb|2SIC|E Chain E, Refined Crystal Structure Of The Complex Of Subtilisin
Bpn' And Streptomyces Subtilisin Inhibitor At 1.8
Angstroms Resolution
pdb|1SIB|E Chain E, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
pdb|1SBN|E Chain E, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
pdb|3SIC|E Chain E, Molecular Recognition At The Active Site Of Subtilisin
Bpn': Crystallographic Studies Using Genetically
Engineered Proteinaceous Inhibitor Ssi (Streptomyces
Subtilisin Inhibitor)
pdb|5SIC|E Chain E, Molecular Recognition At The Active Site Of Subtilisin
Bpn': Crystallographic Studies Using Genetically
Engineered Proteinaceous Inhibitor Ssi (Streptomyces
Subtilisin Inhibitor)
pdb|1SUP|A Chain A, Subtilisin Bpn' At 1.6 Angstroms Resolution: Analysis Of
Discrete Disorder And Comparison Of Crystal Forms
pdb|2ST1|A Chain A, The Three-dimensional Structure Of Bacillus
Amyloliquefaciens Subtilisin At 1.8 Angstroms And An
Analysis Of The Structural Consequences Of Peroxide
Inactivation
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG +QS L + + +GTSMA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIQSTLPGNKYGAYNGTSMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|1S02|A Chain A, Effects Of Engineered Salt Bridges On The Stability Of
Subtilisin Bpn'
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG +QS L + + +GTSMA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIQSTLPGNKYGAYNGTSMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|1LW6|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution
pdb|1TM1|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2
pdb|1TM3|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k Mutant
pdb|1TM4|E Chain E, Crystal Structure Of The Complex Of Subtilsin Bpn'with
Chymotrypsin Inhibitor 2 M59g Mutant
pdb|1TM5|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59a Mutant
pdb|1TM7|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59y Mutant
pdb|1TMG|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59f Mutant
pdb|1TO1|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 Y61a Mutant
pdb|1TO2|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k, In Ph 9 Cryosoak
pdb|1Y1K|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58a Mutant
pdb|1Y33|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58p Mutant
pdb|1Y34|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60a Mutant
pdb|1Y3B|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60s Mutant
pdb|1Y3C|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R62a Mutant
pdb|1Y3D|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R67a Mutant
pdb|1Y3F|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 F69a Mutant
pdb|1Y48|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R65a Mutant
pdb|1Y4A|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59r/e60s Mutant
pdb|1Y4D|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59rE60S MUTANT
Length = 281
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG +QS L + + +GTSMA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIQSTLPGNKYGAYNGTSMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|1SUC|A Chain A, Calcium-Independent Subtilisin By Design
pdb|1SUD|A Chain A, Calcium-Independent Subtilisin By Design
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG +QS L + + SGT MA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIQSTLPGNKYGAKSGTXMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|1DUI|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Crystal
Growth Mutant
Length = 266
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG + S L + + SGTSMA+
Sbjct: 171 VDSSNQRASFSSVG--PELDVMAPG-------------VSICSTLPGNKYGAKSGTSMAS 215
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L N+ + K
Sbjct: 216 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGNSFYYGK 256
>pdb|1SUB|A Chain A, Calcium-Independent Subtilisin By Design
Length = 275
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG +QS L + + SGT MA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIQSTLPGNKYGAYSGTXMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|1A2Q|A Chain A, Subtilisin Bpn' Mutant 7186
Length = 275
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG +QS L + + SGT MA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIQSTLPGNKYGAYSGTXMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|1WSD|A Chain A, Alkaline M-Protease Form I Crystal Strcuture
pdb|1MPT|A Chain A, Crystal Structure Of A New Alkaline Serine Protease
(M-Protease) From Bacillus Sp. Ksm-K16
Length = 269
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 13/77 (16%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
DI+APG VQS S + ++GTSMATPHVAGVA L+K +P WS
Sbjct: 191 DIVAPG-------------VNVQSTYPGSTYASLNGTSMATPHVAGVAALVKQKNPSWSN 237
Query: 526 AAIRSALVTTASPLDNT 542
IR+ L TA+ L NT
Sbjct: 238 VQIRNHLKNTATGLGNT 254
>pdb|1SBI|A Chain A, Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, N76d,
G169a, Q206c, N218s)
Length = 275
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG + S L + + SGTSMA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIXSTLPGNKYGAYSGTSMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|1UBN|A Chain A, Selenosubtilisin Bpn
Length = 275
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG +QS L + + +GT MA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIQSTLPGNKYGAYNGTXMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|1XF1|A Chain A, Structure Of C5a Peptidase- A Key Virulence Factor From
Streptococcus
pdb|1XF1|B Chain B, Structure Of C5a Peptidase- A Key Virulence Factor From
Streptococcus
Length = 926
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 166/419 (39%), Gaps = 63/419 (15%)
Query: 185 HGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGV--YSSDVVAAIDQ 242
HGTH S I +GN + Y G P A + + + +G+ Y+ + AI
Sbjct: 88 HGTHVSGILSGN-APSETKEPYRL---EGAXPEAQLLLXRVEIVNGLADYARNYAQAIRD 143
Query: 243 ALQXXXXXXXXXXXXXXNGIFLEDDAIAVATFAAMEKGVLVVASAGNDG----------- 291
A+ D A A KGV +V SAGND
Sbjct: 144 AINLGAKVINXSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLA 203
Query: 292 --PSYWTLINGAPW----LLTVGAGTIDREFEGSLTLGNGVQINFKS--LYPGNSSPSQV 343
P Y + G P LTV + + D++ ++ + Q + + L P++
Sbjct: 204 DHPDYGVV--GTPAAADSTLTVASYSPDKQLTETVRVKTADQQDKEXPVLSTNRFEPNKA 261
Query: 344 -SLAFMDACDSVTELKKVINSI-VVCREDSSISSQIDNAVAAGVLGAVFISNSAL---LE 398
A+ + + K V I ++ R D +I A AG +G + N +E
Sbjct: 262 YDYAYANRGTKEDDFKDVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIE 321
Query: 399 VYIRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKT--VIGTKPAPMVDSYSSRGPF 456
+ PAAFI+ DG + DNP ++ F T V+ T + +SS G
Sbjct: 322 LPNVDQXPAAFISRKDGLLL------KDNPQKTITFNATPKVLPTASGTKLSRFSSWG-- 373
Query: 457 LSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLL 516
L+ KPDI APG +L SSVA + + +SGTS + P VAG+ GLL
Sbjct: 374 LTADGNIKPDIAAPGQDIL------SSVAN-------NKYAKLSGTSXSAPLVAGIXGLL 420
Query: 517 K----AAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPNKA 571
+ +PD +P+ L L ++ + + D + SP GAG ++ KA
Sbjct: 421 QKQYETQYPDXTPS---ERLDLAKKVLXSSATALYDEDEKAY-FSPRQQGAGAVDAKKA 475
>pdb|1V5I|A Chain A, Crystal Structure Of Serine Protease Inhibitor Poia1 In
Complex With Subtilisin Bpn'
Length = 275
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG +QS L + + +GT MA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIQSTLPGNKYGAYNGTXMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|1SUE|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mutant
Length = 266
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG + S L + + SGTSMA+
Sbjct: 171 VDSSNQRASFSSVG--PELDVMAPG-------------VSICSTLPGNKYGAKSGTSMAS 215
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 216 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 256
>pdb|1AQN|A Chain A, Subtilisin Mutant 8324
pdb|1AU9|A Chain A, Subtilisin Bpn' Mutant 8324 In Citrate
Length = 275
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG + S L + + SGTSMA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSICSTLPGNKYGAKSGTSMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|1S01|A Chain A, Large Increases In General Stability For Subtilisin
Bpn(Prime) Through Incremental Changes In The Free
Energy Of Unfolding
Length = 275
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG + S L + + SGTSMA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSICSTLPGNKYGAKSGTSMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|1YJB|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (M50f,
N76d, G169a, Q206c, N218s, And K256y) In 35%
Dimethylformamide
pdb|1YJA|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (M50f,
N76d, G169a, Q206c, N218s, And K256y) In 20%
Dimethylformamide
pdb|1SBH|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) Mutant (M50f,
N76d, G169a, Q206c, N218s, K256y)
pdb|1YJC|A Chain A, Subtilisin Bpn' 8397+1 (e.c. 3.4.21.14) (mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (m50f,
N76d, G169a, Q206c, N218s, And K256y) In 50%
Dimethylformamide
Length = 275
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG + S L + + SGTSMA+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIXSTLPGNKYGAYSGTSMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTYLGDSFYYGK 265
>pdb|1ST2|A Chain A, The Three-Dimensional Structure Of Bacillus
Amyloliquefaciens Subtilisin At 1.8 Angstroms And An
Analysis Of The Structural Consequences Of Peroxide
Inactivation
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG +QS L + + +GTS A+
Sbjct: 180 VDSSNQRASFSSVG--PELDVMAPG-------------VSIQSTLPGNKYGAYNGTSXAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 265
>pdb|1SUA|A Chain A, Subtilisin Bpn'
Length = 266
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG ++++ L + + SGT+MA+
Sbjct: 171 VDSSNQRASFSSVG--PELDVMAPGVSIVST-------------LPGNKYGAKSGTAMAS 215
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 216 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 256
>pdb|1SPB|S Chain S, Subtilisin Bpn' Prosegment (77 Residues) Complexed With A
Mutant Subtilisin Bpn' (266 Residues). Crystal Ph 4.6.
Crystallization Temperature 20 C Diffraction
Temperature- 160 C
Length = 266
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG ++++ L + + SGT+MA+
Sbjct: 171 VDSSNQRASFSSVG--PELDVMAPGVSIVST-------------LPGNKYGAKSGTAMAS 215
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 216 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 256
>pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis
Natto
Length = 275
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
V+S + R F S + + D++APG +QS L + +GT MAT
Sbjct: 180 VNSSNQRASFSSVGS--ELDVMAPG-------------VSIQSTLPGGTYGAYNGTXMAT 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP W+ A +R L +TA+ L N+ + K
Sbjct: 225 PHVAGAAALILSKHPTWTNAQVRDRLESTATYLGNSFYYGK 265
>pdb|1GNS|A Chain A, Subtilisin Bpn'
Length = 263
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG ++ WS + + + SGT MA+
Sbjct: 168 VDSSNQRASFSSVG--PELDVMAPG---VSIWSTLPG----------NKYGAKSGTXMAS 212
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 213 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 253
>pdb|1GNV|A Chain A, Calcium Independent Subtilisin Bpn' Mutant
Length = 266
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS + R F S P+ D++APG + S L + + SGT MA+
Sbjct: 171 VDSSNQRASFSSVG--PELDVMAPG-------------VSICSTLPGNKYGAKSGTXMAS 215
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+W+ +RS+L T + L ++ + K
Sbjct: 216 PHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGK 256
>pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
V+S + R F S + + D++APG +QS L + +GT MAT
Sbjct: 180 VNSSNQRASFSSAGS--ELDVMAPG-------------VSIQSTLPGGTYGAYNGTCMAT 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP W+ A +R L +TA+ L N+ + K
Sbjct: 225 PHVAGAAALILSKHPTWTNAQVRDRLESTATYLGNSFYYGK 265
>pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic
Bacterium And The Leech Inhibitor Eglin-C
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
V+S + R F S + + D++APG +QS L + +GTSMAT
Sbjct: 180 VNSANQRASFSSAGS--ELDVMAPG-------------VSIQSTLPGGTYGAYNGTSMAT 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP W+ A +R L +TA+ L ++ + K
Sbjct: 225 PHVAGAAALILSKHPTWTNAQVRDRLESTATYLGSSFYYGK 265
>pdb|1C9J|A Chain A, Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A Variant
Length = 269
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
DI+APG VQS S + ++GTSMATPHVAG A L+K +P WS
Sbjct: 191 DIVAPG-------------VNVQSTYPGSTYASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 526 AAIRSALVTTASPLDNT 542
IR+ L TA+ L +T
Sbjct: 238 VQIRNHLKNTATSLGST 254
>pdb|1AH2|A Chain A, Serine Protease Pb92 From Bacillus Alcalophilus, Nmr, 18
Structures
Length = 269
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
DI+APG VQS S + ++GTSMATPHVAG A L+K +P WS
Sbjct: 191 DIVAPG-------------VNVQSTYPGSTYASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 526 AAIRSALVTTASPLDNT 542
IR+ L TA+ L +T
Sbjct: 238 VQIRNHLKNTATSLGST 254
>pdb|1NDU|A Chain A, Bacillus Lentus Subtilisin Variant S101gV104N
Length = 269
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
DI+APG VQS S + ++GTSMATPHVAG A L+K +P WS
Sbjct: 191 DIVAPG-------------VNVQSTYPGSTYASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 526 AAIRSALVTTASPLDNT 542
IR+ L TA+ L +T
Sbjct: 238 VQIRNHLKNTATSLGST 254
>pdb|1NDQ|A Chain A, Bacillus Lentus Subtilisin
pdb|1TK2|A Chain A, Crystal Structure Of The Complex Formed Between Alkaline
Proteinase Savinase And Gramicidin S At 1.5a Resolution
pdb|1JEA|A Chain A, Altered Topology And Flexibility In Engineered Subtilisin
pdb|1SVN|A Chain A, Savinase
pdb|3BX1|A Chain A, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|3BX1|B Chain B, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|1GCI|A Chain A, The 0.78 Angstroms Structure Of A Serine Protease-Bacillus
Lentus Subtilisin
Length = 269
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
DI+APG VQS S + ++GTSMATPHVAG A L+K +P WS
Sbjct: 191 DIVAPG-------------VNVQSTYPGSTYASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 526 AAIRSALVTTASPLDNT 542
IR+ L TA+ L +T
Sbjct: 238 VQIRNHLKNTATSLGST 254
>pdb|1ST3|A Chain A, The Crystal Structure Of The Bacillus Lentus Alkaline
Protease, Subtilisin Bl, At 1.4 Angstroms Resolution
Length = 269
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
DI+APG VQS S + ++GTSMATPHVAG A L+K +P WS
Sbjct: 191 DIVAPG-------------VNVQSTYPGSTYASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 526 AAIRSALVTTASPLDNT 542
IR+ L TA+ L +T
Sbjct: 238 VQIRNHLKNTATSLGST 254
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 46/196 (23%)
Query: 166 IANNPKLKVRMN--------SPRDGSGHGTHTS-SIAAGNYVKGSSYFGYATGIARGIAP 216
I+ +P L +R S +DG+GHGTH + +IAA N G G+AP
Sbjct: 35 ISTHPDLNIRGGASFVPGEPSTQDGNGHGTHVAGTIAALNNSIG----------VLGVAP 84
Query: 217 RACVAMYKAIWRHGVYSSDVVAAIDQALQXXXXXXXXXXXXXXNGIFLEDDAIAV----- 271
A + K + G +++I Q L+ NG+ + + ++
Sbjct: 85 SAELYAVKVL---GADGRGAISSIAQGLEWAGN----------NGMHVANLSLGSPSPSA 131
Query: 272 ----ATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLGNGVQ 327
A +A +GVLVVA++GN G S + + VGA + G G+
Sbjct: 132 TLEQAVNSATSRGVLVVAASGNSGASSISYPARYANAMAVGATDQNNNRASFSQYGAGLD 191
Query: 328 I-----NFKSLYPGNS 338
I N +S YPG++
Sbjct: 192 IVAPGVNVQSTYPGST 207
>pdb|2B6N|A Chain A, The 1.8 A Crystal Structure Of A Proteinase K Like Enzyme
From A Psychrotroph Serratia Species
Length = 278
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 16/90 (17%)
Query: 448 DSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATP 507
DS SS + +C DI APGS + +SW +S N +SGTSMA+P
Sbjct: 185 DSRSSFSNYGTCL-----DIYAPGSSITSSWYTSNSAT-----------NTISGTSMASP 228
Query: 508 HVAGVAGLLKAAHPDWSPAAIRSALVTTAS 537
HVAGVA L +P+ SPA + + L T A+
Sbjct: 229 HVAGVAALYLDENPNLSPAQVTNLLKTRAT 258
>pdb|1YU6|A Chain A, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
pdb|1YU6|B Chain B, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
Length = 275
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS S+R F S + +++APG+ V +++ P ++ A ++GTSMA+
Sbjct: 180 VDSNSNRASFSSVG--AELEVMAPGAGVYSTY-PTNTYAT------------LNGTSMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+ S + +R+ L +TA+ L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNLSASQVRNRLSSTATYLGSSFYYGK 265
>pdb|4GI3|A Chain A, Crystal Structure Of Greglin In Complex With Subtilisin
Length = 275
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS S+R F S + +++APG+ V +++ P ++ A ++GTSMA+
Sbjct: 180 VDSNSNRASFSSVG--AELEVMAPGAGVYSTY-PTNTYAT------------LNGTSMAS 224
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+ S + +R+ L +TA+ L ++ + K
Sbjct: 225 PHVAGAAALILSKHPNLSASQVRNRLSSTATYLGSSFYYGK 265
>pdb|3QTL|A Chain A, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|3QTL|B Chain B, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|3QTL|C Chain C, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|4HX2|A Chain A, Crystal Structure Of Streptomyces Caespitosus Sermetstatin
In Complex With Bacillus Licheniformis Subtilisin
pdb|4HX2|C Chain C, Crystal Structure Of Streptomyces Caespitosus Sermetstatin
In Complex With Bacillus Licheniformis Subtilisin
Length = 274
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS S+R F S + +++APG+ V +++ P ++ A ++GTSMA+
Sbjct: 179 VDSNSNRASFSSVG--AELEVMAPGAGVYSTY-PTNTYAT------------LNGTSMAS 223
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+ S + +R+ L +TA+ L ++ + K
Sbjct: 224 PHVAGAAALILSKHPNLSASQVRNRLSSTATYLGSSFYYGK 264
>pdb|1CSE|E Chain E, The High-Resolution X-Ray Crystal Structure Of The Complex
Formed Between Subtilisin Carlsberg And Eglin C, An
Elastase Inhibitor From The Leech Hirudo Medicinalis.
Structural Analysis, Subtilisin Structure And Interface
Geometry
pdb|2SEC|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
pdb|1OYV|A Chain A, Crystal Structure Of Tomato Inhibitor-Ii In A Ternary
Complex With Subtilisin Carlsberg
pdb|1OYV|B Chain B, Crystal Structure Of Tomato Inhibitor-Ii In A Ternary
Complex With Subtilisin Carlsberg
pdb|1R0R|E Chain E, 1.1 Angstrom Resolution Structure Of The Complex Between
The Protein Inhibitor, Omtky3, And The Serine Protease,
Subtilisin Carlsberg
pdb|1AF4|A Chain A, Crystal Structure Of Subtilisin Carlsberg In Anhydrous
Dioxane
pdb|1BE6|A Chain A, Trans-Cinnamoyl-Subtilisin In Anhydrous Acetonitrile
pdb|1BE8|A Chain A, Trans-Cinnamoyl-Subtilisin In Water
pdb|1BFK|A Chain A, Crystal Structure Of Subtilisin Carlsberg In 40%
Acetonitrile
pdb|1BFU|A Chain A, Subtilisin Carlsberg In 20% Dioxane
pdb|1SBC|A Chain A, The Refined Crystal Structure Of Subtilisin Carlsberg At
2.5 Angstroms Resolution
pdb|1SCA|A Chain A, Enzyme Crystal Structure In A Neat Organic Solvent
pdb|1SCB|A Chain A, Enzyme Crystal Structure In A Neat Organic Solvent
pdb|1SCD|A Chain A, X-Ray Crystal Structure Of Cross-Linked Subtilism
Carlsberg In Water Vs. Acetonitrile
pdb|2WUV|A Chain A, Crystallographic Analysis Of Counter-Ion Effects On
Subtilisin Enzymatic Action In Acetonitrile
pdb|2WUW|E Chain E, Crystallographic Analysis Of Counter-Ion Effects On
Subtilisin Enzymatic Action In Acetonitrile (Native
Data)
Length = 274
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS S+R F S + +++APG+ V +++ P ++ A ++GTSMA+
Sbjct: 179 VDSNSNRASFSSVG--AELEVMAPGAGVYSTY-PTNTYAT------------LNGTSMAS 223
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+ S + +R+ L +TA+ L ++ + K
Sbjct: 224 PHVAGAAALILSKHPNLSASQVRNRLSSTATYLGSSFYYGK 264
>pdb|1C9N|A Chain A, Bacillus Lentus Substilisin Variant (Ser 87)
K27rV104YN123ST274A
Length = 269
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 13/77 (16%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
DI+APG VQS S + ++GT MATPHVAG A L+K +P WS
Sbjct: 191 DIVAPG-------------VNVQSTYPGSTYASLNGTXMATPHVAGAAALVKQKNPSWSN 237
Query: 526 AAIRSALVTTASPLDNT 542
IR+ L TA+ L +T
Sbjct: 238 VQIRNHLKNTATSLGST 254
>pdb|1IAV|A Chain A, Structure On Native (Asn 87) Subtilisin From Bacillus
Lentus
Length = 269
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 13/77 (16%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
DI+APG VQS S + ++GT MATPHVAG A L+K +P WS
Sbjct: 191 DIVAPG-------------VNVQSTYPGSTYASLNGTXMATPHVAGAAALVKQKNPSWSN 237
Query: 526 AAIRSALVTTASPLDNT 542
IR+ L TA+ L +T
Sbjct: 238 VQIRNHLKNTATSLGST 254
>pdb|1C3L|A Chain A, Subtilisin-Carlsberg Complexed With Xenon (8 Bar)
pdb|3UNX|A Chain A, Bond Length Analysis Of Asp, Glu And His Residues In
Subtilisin Carlsberg At 1.26a Resolution
Length = 274
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS S+R F S + +++APG+ V +++ P ++ A ++GTSMA+
Sbjct: 179 VDSNSNRASFSSVG--AELEVMAPGAGVYSTY-PTNTYAT------------LNGTSMAS 223
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+ S + +R+ L +TA+ L ++ + K
Sbjct: 224 PHVAGAAALILSKHPNLSASQVRNRLSSTATYLGSSFYYGK 264
>pdb|1Q5P|A Chain A, S156e/s166d Variant Of Bacillus Lentus Subtilisin
Length = 269
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 13/77 (16%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
DI+APG VQS S + ++GT MATPHVAG A L+K +P WS
Sbjct: 191 DIVAPG-------------VNVQSTYPGSTYASLNGTXMATPHVAGAAALVKQKNPSWSN 237
Query: 526 AAIRSALVTTASPLDNT 542
IR+ L TA+ L +T
Sbjct: 238 VQIRNHLKNTATSLGST 254
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 41/144 (28%)
Query: 166 IANNPKLKVRMN--------SPRDGSGHGTHTS-SIAAGNYVKGSSYFGYATGIARGIAP 216
I+ +P L +R S +DG+GHGTH + +IAA + G+ G+AP
Sbjct: 35 ISTHPDLNIRGGASFVPGEPSTQDGNGHGTHVAGTIAA---------LDNSIGV-LGVAP 84
Query: 217 RACVAMYKAIWRHGVYSSDVVAAIDQALQXXXXXXXXXXXXXXNGIFLEDDAIAV----- 271
A + K + G S +++I Q L+ NG+ + + ++
Sbjct: 85 SAELYAVKVL---GASGSGAISSIAQGLEWAGN----------NGMHVANLSLGSPSPSA 131
Query: 272 ----ATFAAMEKGVLVVASAGNDG 291
A +A +GVLVVA++GN+G
Sbjct: 132 TLEQAVNSATSRGVLVVAASGNEG 155
>pdb|1C9M|A Chain A, Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 13/77 (16%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
DI+APG VQS S + ++GT MATPHVAG A L+K +P WS
Sbjct: 191 DIVAPG-------------VNVQSTYPGSTYASLNGTXMATPHVAGAAALVKQKNPSWSN 237
Query: 526 AAIRSALVTTASPLDNT 542
IR+ L TA+ L +T
Sbjct: 238 VQIRNHLKNTATSLGST 254
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 46/196 (23%)
Query: 166 IANNPKLKVRMN--------SPRDGSGHGTHTS-SIAAGNYVKGSSYFGYATGIARGIAP 216
I+ +P L +R S +DG+GHGTH + +IAA + G+ G+AP
Sbjct: 35 ISTHPDLNIRGGASFVPGEPSTQDGNGHGTHVAGTIAA---------LDNSIGV-LGVAP 84
Query: 217 RACVAMYKAIWRHGVYSSDVVAAIDQALQXXXXXXXXXXXXXXNGIFLEDDAIAV----- 271
A + K + G S +++I Q L+ NG+ + + ++
Sbjct: 85 SAELYAVKVL---GASGSGAISSIAQGLE----------WAGNNGMHVANLSLGSPSPSA 131
Query: 272 ----ATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLGNGVQ 327
A +A +GVLVVA++GN G + + VGA + G G+
Sbjct: 132 TLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQNNNRASFSQYGAGLD 191
Query: 328 I-----NFKSLYPGNS 338
I N +S YPG++
Sbjct: 192 IVAPGVNVQSTYPGST 207
>pdb|1SCN|E Chain E, Inactivation Of Subtilisin Carlsberg By
N-(Tert-Butoxycarbonyl-Alanyl-
Prolyl-Phenylalanyl)-O-Benzol Hydroxylamine: Formation
Of Covalent Enzyme-Inhibitor Linkage In The Form Of A
Carbamate Derivative
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS S+R F S + +++APG+ V +++ P ++ A ++GTSMA+
Sbjct: 179 VDSNSNRASFSSVG--AELEVMAPGAGVYSTY-PTNTYAT------------LNGTSMAS 223
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+ S + +R+ L +TA+ L ++ + K
Sbjct: 224 PHVAGAAALILSKHPNLSASQVRNRLSSTATYLGSSFYYGK 264
>pdb|2IXT|A Chain A, Sphericase
pdb|2IXT|B Chain B, Sphericase
pdb|3D43|A Chain A, The Crystal Structure Of Sph At 0.8a
pdb|3D43|B Chain B, The Crystal Structure Of Sph At 0.8a
Length = 310
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 91/215 (42%), Gaps = 40/215 (18%)
Query: 333 LYPGNSSPSQVSLAFMDACD--SVTELKKVIN-SIVVCREDSSISSQIDNAVAAGVLGAV 389
L G+ ++ A A D + T K +I+ S+ +S ISS ++ A + GVL
Sbjct: 106 LDSGSGYSDDIAAAIRHAADQATATGTKTIISMSLGSSANNSLISSAVNYAYSKGVLIVA 165
Query: 390 FISNSALLEVYIRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDS 449
NS + I +P A N + +N + +R V
Sbjct: 166 AAGNSGYSQGTI--GYPGALPNA-------IAVAALENVQQNGTYR-----------VAD 205
Query: 450 YSSRGPFLSCPN--IPKPDIL--APGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMA 505
YSSRG + + I + DI APGS V ++W +N +SGTSMA
Sbjct: 206 YSSRGYISTAGDYVIQEGDIEISAPGSSVYSTW-------------YNGGYNTISGTSMA 252
Query: 506 TPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLD 540
TPHV+G+A + A +P S +RS L A +D
Sbjct: 253 TPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVD 287
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 177 NSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGV-YSSD 235
NS D +GHGTH + A + GS G G+AP A + YK + G YS D
Sbjct: 63 NSCTDRNGHGTHVAGTALAD--GGSDQAGI-----YGVAPDADLWAYKVLLDSGSGYSDD 115
Query: 236 VVAAIDQALQXXXXXXXXXXXXXXNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYW 295
+ AAI A G + I+ A A KGVL+VA+AGN G S
Sbjct: 116 IAAAIRHAADQATATGTKTIISMSLGSSANNSLISSAVNYAYSKGVLIVAAAGNSGYSQG 175
Query: 296 TL 297
T+
Sbjct: 176 TI 177
>pdb|1SEL|A Chain A, Crystal Structure Of Selenosubtilisin At 2.0-Angstroms
Resolution
pdb|1SEL|B Chain B, Crystal Structure Of Selenosubtilisin At 2.0-Angstroms
Resolution
pdb|1AV7|A Chain A, Subtilisin Carlsberg L-Naphthyl-1-Acetamido Boronic Acid
Inhibitor Complex
pdb|1AVT|A Chain A, Subtilisin Carlsberg D-Para-Chlorophenyl-1-Acetamido
Boronic Acid Inhibitor Complex
pdb|1VSB|A Chain A, Subtilisin Carlsberg L-Para-Chlorophenyl-1-Acetamido
Boronic Acid Inhibitor Complex
pdb|3VSB|A Chain A, Subtilisin Carlsberg D-Naphthyl-1-Acetamido Boronic Acid
Inhibitor Complex
Length = 274
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS S+R F S + +++APG+ V +++ P ++ A ++GT MA+
Sbjct: 179 VDSNSNRASFSSVG--AELEVMAPGAGVYSTY-PTNTYAT------------LNGTXMAS 223
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + HP+ S + +R+ L +TA+ L ++ + K
Sbjct: 224 PHVAGAAALILSKHPNLSASQVRNRLSSTATYLGSSFYYGK 264
>pdb|1EA7|A Chain A, Sphericase
Length = 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 40/215 (18%)
Query: 333 LYPGNSSPSQVSLAFMDACD--SVTELKKVIN-SIVVCREDSSISSQIDNAVAAGVLGAV 389
L G+ ++ A A D + T K +I+ S+ +S ISS ++ A + GVL
Sbjct: 106 LDSGSGYSDDIAAAIRHAADQATATGTKTIISMSLGSSANNSLISSAVNYAYSKGVLIVA 165
Query: 390 FISNSALLEVYIRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDS 449
NS + I +P A N + +N + +R V
Sbjct: 166 AAGNSGYSQGTI--GYPGALPNA-------IAVAALENVQQNGTYR-----------VAD 205
Query: 450 YSSRGPFLSCPN--IPKPDIL--APGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMA 505
YSSRG + + I + DI APGS V ++W +N +SGT MA
Sbjct: 206 YSSRGYISTAGDYVIQEGDIEISAPGSSVYSTW-------------YNGGYNTISGTXMA 252
Query: 506 TPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLD 540
TPHV+G+A + A +P S +RS L A +D
Sbjct: 253 TPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVD 287
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 177 NSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGV-YSSD 235
NS D +GHGTH + A + GS G G+AP A + YK + G YS D
Sbjct: 63 NSCTDRNGHGTHVAGTALAD--GGSDQAGI-----YGVAPDADLWAYKVLLDSGSGYSDD 115
Query: 236 VVAAIDQALQXXXXXXXXXXXXXXNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYW 295
+ AAI A G + I+ A A KGVL+VA+AGN G S
Sbjct: 116 IAAAIRHAADQATATGTKTIISMSLGSSANNSLISSAVNYAYSKGVLIVAAAGNSGYSQG 175
Query: 296 TL 297
T+
Sbjct: 176 TI 177
>pdb|3LPD|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 339
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%)
Query: 447 VDSYSSRGPFLSCPNIP-KPDILAPGSLVLASWSPISSVAEVQSGL---LYSNFNLMSGT 502
V + +SRG S N D+ APG +L++ V SG + ++ M+GT
Sbjct: 225 VGATTSRGIRASFSNYGVDVDLAAPGQDILST---------VDSGTRRPVSDAYSFMAGT 275
Query: 503 SMATPHVAGVAGLLKAA----HPDWSPAAIRSALVTTASPLDNTL 543
SMATPHV+GVA L+ +A + + +PA ++ LV+T SP + L
Sbjct: 276 SMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNGRL 320
>pdb|3LPC|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 340
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%)
Query: 447 VDSYSSRGPFLSCPNIP-KPDILAPGSLVLASWSPISSVAEVQSGL---LYSNFNLMSGT 502
V + +SRG S N D+ APG +L++ V SG + ++ M+GT
Sbjct: 225 VGATTSRGIRASFSNYGVDVDLAAPGQDILST---------VDSGTRRPVSDAYSFMAGT 275
Query: 503 SMATPHVAGVAGLLKAA----HPDWSPAAIRSALVTTASPLDNTL 543
SMATPHV+GVA L+ +A + + +PA ++ LV+T SP + L
Sbjct: 276 SMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNGRL 320
>pdb|3LPA|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 340
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%)
Query: 447 VDSYSSRGPFLSCPNIP-KPDILAPGSLVLASWSPISSVAEVQSGL---LYSNFNLMSGT 502
V + +SRG S N D+ APG +L++ V SG + ++ M+GT
Sbjct: 225 VGATTSRGIRASFSNYGVDVDLAAPGQDILST---------VDSGTRRPVSDAYSFMAGT 275
Query: 503 SMATPHVAGVAGLLKAA----HPDWSPAAIRSALVTTASPLDNTL 543
SMATPHV+GVA L+ +A + + +PA ++ LV+T SP + L
Sbjct: 276 SMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNGRL 320
>pdb|1TEC|E Chain E, Crystallographic Refinement By Incorporation Of Molecular
Dynamics. The Thermostable Serine Protease Thermitase
Complexed With Eglin-C
pdb|2TEC|E Chain E, Molecular Dynamics Refinement Of A Thermitase-Eglin-C
Complex At 1.98 Angstroms Resolution And Comparison Of
Two Crystal Forms That Differ In Calcium Content
pdb|3TEC|E Chain E, Calcium Binding To Thermitase. Crystallographic Studies Of
Thermitase At 0, 5 And 100 Mm Calcium
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
D+ APGS + +++ P S+ A +SGTSMATPHVAGVAGLL A S
Sbjct: 201 DVAAPGSWIYSTY-PTSTYAS------------LSGTSMATPHVAGVAGLL--ASQGRSA 245
Query: 526 AAIRSALVTTASPLDNTLSHIKDASNNNFPA 556
+ IR+A+ TA + T ++ N + A
Sbjct: 246 SNIRAAIENTADKISGTGTYWAKGRVNAYKA 276
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 18/71 (25%)
Query: 160 FFNKGLIANNPKLKVRM----------NSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATG 209
+ G+ +N+P L ++ ++P++G+GHGTH + IAA + +TG
Sbjct: 36 IVDTGVQSNHPDLAGKVVGGWDFVDNDSTPQNGNGHGTHCAGIAA-------AVTNNSTG 88
Query: 210 IARGIAPRACV 220
IA G AP+A +
Sbjct: 89 IA-GTAPKASI 98
>pdb|1THM|A Chain A, Crystal Structure Of Thermitase At 1.4 Angstroms
Resolution
Length = 279
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
D+ APGS + +++ P S+ A +SGTSMATPHVAGVAGLL A S
Sbjct: 201 DVAAPGSSIYSTY-PTSTYAS------------LSGTSMATPHVAGVAGLL--ASQGRSA 245
Query: 526 AAIRSALVTTASPLDNTLSHIKDASNNNFPA 556
+ IR+A+ TA + T ++ N + A
Sbjct: 246 SNIRAAIENTADKISGTGTYWAKGRVNAYKA 276
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 18/71 (25%)
Query: 160 FFNKGLIANNPKLKVRM----------NSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATG 209
+ G+ +N+P L ++ ++P++G+GHGTH + IAA + +TG
Sbjct: 36 IVDTGVQSNHPDLAGKVVGGWDFVDNDSTPQNGNGHGTHCAGIAA-------AVTNNSTG 88
Query: 210 IARGIAPRACV 220
IA G AP+A +
Sbjct: 89 IA-GTAPKASI 98
>pdb|1V6C|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-like
Protease Apa1 From Antarctic Psychrotroph
Pseudoalteromonas Sp. As-11
pdb|1V6C|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-like
Protease Apa1 From Antarctic Psychrotroph
Pseudoalteromonas Sp. As-11
pdb|1WVM|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-Like Serine
Protease Apa1 From Antarctic Psychrotroph
Pseudoaleromonas Sp. As-11, Complexed With Inhibitor
Chymostatin
pdb|1WVM|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-Like Serine
Protease Apa1 From Antarctic Psychrotroph
Pseudoaleromonas Sp. As-11, Complexed With Inhibitor
Chymostatin
pdb|1Y9Z|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-like Serine
Protease From Antarctic Psychrotroph Pseudoalteromonas
Sp. As-11 At 0.14 Nm Resolution
pdb|1Y9Z|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-like Serine
Protease From Antarctic Psychrotroph Pseudoalteromonas
Sp. As-11 At 0.14 Nm Resolution
Length = 441
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 453 RGPFLSCPN----IPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPH 508
+ PFL N +P + L L + S+ Q Y +N GTSMATPH
Sbjct: 318 QNPFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYYN---GTSMATPH 374
Query: 509 VAGVAGLLKAAHPDWSPAAIRSALVTTASPL 539
V+GVA L+ + HP+ S + +R+AL TA L
Sbjct: 375 VSGVATLVWSYHPECSASQVRAALNATADDL 405
>pdb|1BH6|A Chain A, Subtilisin Dy In Complex With The Synthetic Inhibitor N-
Benzyloxycarbonyl-Ala-Pro-Phe-Chloromethyl Ketone
Length = 274
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
VDS +R F S + + +++APG V +++ + + ++GTSMA+
Sbjct: 179 VDSNKNRASFSSVGS--ELEVMAPGVSVYSTYPS-------------NTYTSLNGTSMAS 223
Query: 507 PHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547
PHVAG A L+ + +P S + +R+ L +TA+ L ++ + K
Sbjct: 224 PHVAGAAALILSKYPTLSASQVRNRLSSTATNLGDSFYYGK 264
>pdb|4DZT|A Chain A, Aqualysin I: The Crystal Structure Of A Serine Protease
From An Extreme Thermophile, Thermus Aquaticus Yt-1
Length = 276
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
D+ APG+ + ++W + + ++GTSMATPHVAGVA L +P +P
Sbjct: 196 DLFAPGASIPSAWYTSDTATQT-----------LNGTSMATPHVAGVAALYLEQNPSATP 244
Query: 526 AAIRSALVTTASPLDNTLSHIKDASNNNF 554
A++ SA++ A+ LS I S N
Sbjct: 245 ASVASAILNGATT--GRLSGIGSGSPNRL 271
>pdb|2GKO|A Chain A, S41 Psychrophilic Protease
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 177 NSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGV-YSSD 235
NS D GHGTH + A N GS +G +AP A + YK + G Y+ D
Sbjct: 63 NSCTDRQGHGTHVAGSALANGGTGSGVYG--------VAPEADLWAYKVLGDDGSGYADD 114
Query: 236 VVAAIDQALQXXXXXXXXXXXXXXNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGP 292
+ AI A G E I A A +KGVL++A+AGN GP
Sbjct: 115 IAEAIRHAGDQATALNTKVVINMSLGSSGESSLITNAVDYAYDKGVLIIAAAGNSGP 171
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 17/98 (17%)
Query: 447 VDSYSSRGPFLSCPN--IPKPD--ILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGT 502
V +SSRG + + I K D I APG+ V ++W + +SGT
Sbjct: 202 VADFSSRGHKRTAGDYVIQKGDVEISAPGAAVYSTW-------------FDGGYATISGT 248
Query: 503 SMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLD 540
SMA+PH AG+A + A P S +R L T AS D
Sbjct: 249 SMASPHAAGLAAKIWAQSPAASNVDVRGELQTRASVND 286
>pdb|1DBI|A Chain A, Crystal Structure Of A Thermostable Serine Protease
Length = 280
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 415 GQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSL- 473
G +I+ CD T +L+ K + +V + + G + +++A G++
Sbjct: 127 GAEVINLSLGCDCHTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVD 186
Query: 474 ---VLASWSP-------ISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDW 523
LAS+S ++ ++ S + + + MSGTSMA+PHVAG+A LL A
Sbjct: 187 QYDRLASFSNYGTWVDVVAPGVDIVSTITGNRYAYMSGTSMASPHVAGLAALL--ASQGR 244
Query: 524 SPAAIRSALVTTASPLDNTLSHIKDASNNNFPA 556
+ IR A+ TA + T ++ K N++ A
Sbjct: 245 NNIEIRQAIEQTADKISGTGTYFKYGRINSYNA 277
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 16/137 (11%)
Query: 179 PRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGVYS-SDVV 237
P D + HGTH + IAA ATGIA G+AP + +A+ R+G + SD+
Sbjct: 66 PMDLNNHGTHVAGIAAAETNN-------ATGIA-GMAPNTRILAVRALDRNGSGTLSDIA 117
Query: 238 AAIDQALQXXXXXXXXXXXXXXNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTL 297
AI A + LE+ A A KG +VVA+AGN+G S T
Sbjct: 118 DAIIYAADSGAEVINLSLGCDCHTTTLEN-----AVNYAWNKGSVVVAAAGNNGSS--TT 170
Query: 298 INGAPWLLTVGAGTIDR 314
A + + G +D+
Sbjct: 171 FEPASYENVIAVGAVDQ 187
>pdb|1S2N|A Chain A, Crystal Strucure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
pdb|1S2N|B Chain B, Crystal Strucure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
pdb|1SH7|A Chain A, Crystal Structure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
pdb|1SH7|B Chain B, Crystal Structure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSP 525
D+ APGS + ++W + +SGTSMATPHVAGVA L + +P
Sbjct: 196 DLFAPGSQIKSAW-------------YDGGYKTISGTSMATPHVAGVAALYLQENNGLTP 242
Query: 526 AAIRSALVTTASPLDNTLSHIKDASN 551
+ L + AS +N +S + +N
Sbjct: 243 LQLTGLLNSRAS--ENKVSDTRGTTN 266
>pdb|1WMD|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-Kp43 (1.30 Angstrom, 100 K)
pdb|1WME|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-kp43 (1.50 Angstrom, 293 K)
Length = 434
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
V +SSRGP + KPD++APG+ +L++ S ++ + + S + M GTSMAT
Sbjct: 202 VAQFSSRGP--TKDGRIKPDVMAPGTFILSARSSLAPDSSFWANH-DSKYAYMGGTSMAT 258
Query: 507 PHVAGVAGLLK 517
P VAG L+
Sbjct: 259 PIVAGNVAQLR 269
>pdb|3TI9|A Chain A, Crystal Structure Of The Basic Protease Bprb From The
Ovine Footrot Pathogen, Dichelobacter Nodosus
Length = 352
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 467 ILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAA----HPD 522
+ APG+ +L S++ Q+G + S++ + +GTSMA PHV+GVA L+ +A
Sbjct: 247 LAAPGTNIL------STIDVGQAGPVRSSYGMKAGTSMAAPHVSGVAALVISAANSIGKT 300
Query: 523 WSPAAIRSALVTTASPLDNTL 543
+P+ + LV T S + L
Sbjct: 301 LTPSELSDILVRTTSRFNGRL 321
>pdb|3TI7|A Chain A, Crystal Structure Of The Basic Protease Bprv From The
Ovine Footrot Pathogen, Dichelobacter Nodosus
Length = 352
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 467 ILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAA----HPD 522
+ APG+ +L S++ Q+G + S++ + +GTSMA PHV+GVA L+ +A
Sbjct: 247 LAAPGTNIL------STIDVGQAGPVRSSYGMKAGTSMAAPHVSGVAALVISAANSIGKT 300
Query: 523 WSPAAIRSALVTTASPLDNTL 543
+P+ + LV T S + L
Sbjct: 301 LTPSELSDILVRTTSRFNGRL 321
>pdb|3LXU|X Chain X, Crystal Structure Of Tripeptidyl Peptidase 2 (Tpp Ii)
Length = 1354
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 27/170 (15%)
Query: 471 GSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGL----LKAAHPDWSPA 526
G V A I+SV + S L +GTS A PHVAG L LK + ++SP
Sbjct: 434 GVTVCAPGGAIASVPQ----FTXSKSQLXNGTSXAAPHVAGAVALLISGLKQQNIEYSPY 489
Query: 527 AIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPNKALDPGLVYDATAEDYI 586
+I+ A+ TA+ L P G G +N KA + + + ++ +
Sbjct: 490 SIKRAISVTATKLGYV--------------DPFAQGHGLLNVEKAFEHLTEHRQSKDNXL 535
Query: 587 KLLCAM-NYKPEQIRIFTKSSQKCNNRSLDLNYPSFITFFNDYDSSSDEK 635
+ + N + I + Q S+D N F+ND ++ +K
Sbjct: 536 RFSVRVGNNADKGIHL----RQGVQRNSIDYNVYIEPIFYNDKEADPKDK 581
>pdb|3F7M|A Chain A, Crystal Structure Of Apo Cuticle-Degrading Protease
(Ver112) From Verticillium Psalliotae
Length = 279
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 13/51 (25%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLL 516
DI APG+ + ++W + N +SGTSMATPH+AG+A L
Sbjct: 201 DIFAPGTSITSTW-------------IGGRTNTISGTSMATPHIAGLAAYL 238
>pdb|1PEK|E Chain E, Structure Of The Complex Of Proteinase K With A
Substrate-analogue Hexa-peptide Inhibitor At 2.2
Angstroms Resolution
pdb|1HT3|A Chain A, Mercury Induced Modifications In The Stereochemistry Of
The Active Site Through Cys-73 In A Serine Protease:
Crystal Structure Of The Complex Of A Partially Modified
Proteinase K With Mercury At 1.8 A Resolution
pdb|1PFG|A Chain A, Strategy To Design Inhibitors: Structure Of A Complex Of
Proteinase K With A Designed Octapeptide Inhibitor
N-Ac-Pro-Ala-Pro-Phe-Dala-Ala- Ala-Ala-Nh2 At 2.5a
Resolution
Length = 279
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 448 DSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATP 507
D Y R F + ++ DI PG+ +L++W S+ + +SGTSMATP
Sbjct: 184 DRYDRRSSFSNYGSVL--DIFGPGTSILSTWIGGSTRS-------------ISGTSMATP 228
Query: 508 HVAGVAGLLKAAHPDWSPAAIR 529
HVAG+A L + +A R
Sbjct: 229 HVAGLAAYLMTLGKTTAASACR 250
>pdb|3PRK|E Chain E, Inhibition Of Proteinase K By
Methoxysuccinyl-Ala-Ala-Pro-Ala- Chloromethyl Ketone. An
X-Ray Study At 2.2-Angstroms Resolution
pdb|1BJR|E Chain E, Complex Formed Between Proteolytically Generated
Lactoferrin Fragment And Proteinase K
pdb|1CNM|A Chain A, Enhancement Of Catalytic Efficiency Of Proteinase K
Through Exposure To Anhydrous Organic Solvent At 70
Degrees Celsius
pdb|1EGQ|A Chain A, Enhancement Of Enzyme Activity Through Three-Phase
Partitioning: Crystal Structure Of A Modified Serine
Proteinase At 1.5 A Resolution
pdb|1OYO|A Chain A, Regulation Of Protease Activity By Melanin: Crystal
Structure Of The Complex Formed Between Proteinase K And
Melanin Monomers At 2.0 Resolution
pdb|1PJ8|A Chain A, Structure Of A Ternary Complex Of Proteinase K, Mercury
And A Substrate-Analogue Hexapeptide At 2.2 A Resolution
pdb|2DP4|E Chain E, Crystal Structure Of The Complex Formed Between Proteinase
K And A Human Lactoferrin Fragment At 2.9 A Resolution
pdb|1PTK|A Chain A, Studies On The Inhibitory Action Of Mercury Upon
Proteinase K
pdb|2PKC|A Chain A, Crystal Structure Of Calcium-Free Proteinase K At 1.5
Angstroms Resolution
pdb|2PRK|A Chain A, Synchrotron X-Ray Data Collection And Restrained Least-
Squares Refinement Of The Crystal Structure Of
Proteinase K At 1.5 Angstroms Resolution
pdb|3D9Q|X Chain X, Proteinase K By Lb Nanotemplate Method Before High X-Ray
Dose On Esrf Id23-1 Beamline
pdb|3DDZ|X Chain X, Proteinase K By Lb Nanotemplate Method After The First
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE0|X Chain X, Proteinase K By Lb Nanotemplate Method After The Second
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE1|X Chain X, Proteinase K By Lb Nanotemplate Method After The Third
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE2|X Chain X, Proteinase K By Lb Nanotemplate Method After The Fourth
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE3|X Chain X, Proteinase K By Classical Hanging Drop Method Before High
X- Ray Dose On Esrf Id23-1 Beamline
pdb|3DE4|X Chain X, Proteinase K By Classical Hanging Drop Method After The
First Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE5|X Chain X, Roteinase K By Classical Hanging Drop Method After The
Second Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE6|X Chain X, Proteinase K By Classical Hanging Drop Method After The
Third Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE7|X Chain X, Proteinase K By Classical Hanging Drop Method After The
Fourth Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DVQ|X Chain X, Proteinase K By Lb Nanotemplate Method Before High X-Ray
Dose On Esrf Id14-2 Beamline
pdb|3DVR|X Chain X, Proteinase K By Lb Nanotemplate Method After The First
Step Of High X-Ray Dose On Esrf Id14-2 Beamline
pdb|3DVS|X Chain X, Proteinase K By Lb Nanotmplate Method After The Second
Step Of High Dose On Esrf Id14-2 Beamline
pdb|3DW1|X Chain X, Proteinase K By Lb Nanotemplate Method After The Third
Step High X-Ray Dose On Esrf Id14-2 Beamline
pdb|3DW3|X Chain X, Proteinase K By Classical Hanging Drop Method Before High
X Ray Dose On Esrf Id 14-2 Beamline
pdb|3DWE|X Chain X, Proteinase K By Classical Hanging Drop Method After High
X- Ray Dose On Esrf Id14-2 Beamline
pdb|3I2Y|X Chain X, Proteinase K By Classical Hanging Drop Method Before High
X- On Id14-2 Beamline At Esrf
pdb|3I30|X Chain X, Proteinase K By Classical Hanging Drop Method After High
X-R Id14-2 Beamline At Esrf
pdb|3I37|X Chain X, Proteinase K By Lb Nanotemplate Method Before High X-Ray
Dos 2 Beamline At Esrf
pdb|3I34|X Chain X, Proteinase K By Lb Nanotemplate Method After High X-Ray
Dose On Id14-2 Beamline At Esrf
pdb|3PTL|A Chain A, Crystal Structure Of Proteinase K Inhibited By A
Lactoferrin Nonapeptide,
Lys-Gly-Glu-Ala-Asp-Ala-Leu-Ser-Leu-Asp At 1.3 A
Resolution.
pdb|4DJ5|X Chain X, Proteinase K By Langmuir-Blodgett Hanging Drop Method At
1.8a Resolution For Unique Water Distribution
Length = 279
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 448 DSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATP 507
D Y R F + ++ DI PG+ +L++W S+ + +SGTSMATP
Sbjct: 184 DRYDRRSSFSNYGSVL--DIFGPGTSILSTWIGGSTRS-------------ISGTSMATP 228
Query: 508 HVAGVAGLLKAAHPDWSPAAIR 529
HVAG+A L + +A R
Sbjct: 229 HVAGLAAYLMTLGKTTAASACR 250
>pdb|3F7O|A Chain A, Crystal Structure Of Cuticle-degrading Protease From
Paecilomyces Lilacinus (pl646)
pdb|3F7O|B Chain B, Crystal Structure Of Cuticle-degrading Protease From
Paecilomyces Lilacinus (pl646)
Length = 284
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 13/51 (25%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLL 516
DI APGS +L++W + N +SGTSMATPH+ G+ L
Sbjct: 203 DIFAPGSNILSTW-------------IGGTTNTISGTSMATPHIVGLGAYL 240
>pdb|1IC6|A Chain A, Structure Of A Serine Protease Proteinase K From
Tritirachium Album Limber At 0.98 A Resolution
pdb|1P7V|A Chain A, Structure Of A Complex Formed Between Proteinase K And A
Designed Heptapeptide Inhibitor Pro-Ala-Pro-Phe-Ala-Ala-
Ala At Atomic Resolution
pdb|1P7W|A Chain A, Crystal Structure Of The Complex Of Proteinase K With A
Designed Heptapeptide Inhibitor
Pro-Ala-Pro-Phe-Ala-Ser-Ala At Atomic Resolution
pdb|2HD4|A Chain A, Crystal Structure Of Proteinase K Inhibited By A
Lactoferrin Octapeptide Gly-Asp-Glu-Gln-Gly-Glu-Asn-Lys
At 2.15 A Resolution
pdb|2DQK|A Chain A, Crystal Structure Of The Complex Of Proteinase K With A
Specific Lactoferrin Peptide Val-Leu-Leu-His At 1.93 A
Resolution
pdb|2HPZ|A Chain A, Crystal Structure Of Proteinase K Complex With A Synthetic
Peptide Klkllvvirlk At 1.69 A Resolution
pdb|2DUJ|A Chain A, Crystal Structure Of The Complex Formed Between Proteinase
K And A Synthetic Peptide Leu-Leu-Phe-Asn-Asp At 1.67 A
Resolution
pdb|2ID8|A Chain A, Crystal Structure Of Proteinase K
pdb|2G4V|A Chain A, Anomalous Substructure Of Proteinase K
pdb|2PQ2|A Chain A, Structure Of Serine Proteinase K Complex With A Highly
Flexible Hydrophobic Peptide At 1.8a Resolution
pdb|2PWA|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Alanine Boronic Acid At 0.83a Resolution
pdb|2PWB|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Coumarin At 1.9 A Resolution
pdb|2PYZ|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Auramine At 1.8a Resolution
pdb|2V8B|A Chain A, Sad Structure Solution Of Proteinase K Grown In Selenate
Solution
pdb|3DYB|A Chain A, Proteinase K- Digalacturonic Acid Complex
pdb|3GT3|A Chain A, Structure Of Proteinase K With The Mad Triangle B3c
pdb|3GT4|A Chain A, Structure Of Proteinase K With The Magic Triangle I3c
pdb|3OSZ|A Chain A, Crystal Structure Of The Complex Of Proteinase K With An
Antimicrobial Nonapeptide, At 2.26 A Resolution
pdb|3L1K|A Chain A, Sad Structure Solution Of Proteinase K Grown In Potassium
Tellurate Solution
pdb|3AJ8|A Chain A, X-Ray Analysis Of Crystal Of Proteinase K Obtained From
H2o Solution Using Peg 8000
pdb|3AJ9|A Chain A, X-Ray Analysis Of Crystal Of Proteinase K Obtained From
D2o Solution Using Peg 8000
pdb|3Q40|A Chain A, Sulphur Sad Structure Solution Of Proteinase K Grown In
So4-Less Solution.
pdb|3Q5G|A Chain A, Sulphur Sad Structure Solution Of Proteinase K Grown In
So4 Solution
pdb|3QMP|A Chain A, Selenium Sad Structure Solution Of Proteinase K Grown In
So4-Less Solution And Soaked In Selenate.
pdb|4B5L|A Chain A, The 1.6 A High Energy Room Temperature Structure Of
Proteinase K At 38.4 Kev And 0.04 Mgy
pdb|4FON|A Chain A, High Energy Remote Sad Structure Solution Of Proteinase K
From The 37.8 Kev Tellurium K Edge
Length = 279
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 448 DSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATP 507
D Y R F + ++ DI PG+ +L++W S+ + +SGTSMATP
Sbjct: 184 DRYDRRSSFSNYGSVL--DIFGPGTDILSTWIGGSTRS-------------ISGTSMATP 228
Query: 508 HVAGVAGLLKAAHPDWSPAAIR 529
HVAG+A L + +A R
Sbjct: 229 HVAGLAAYLMTLGKTTAASACR 250
>pdb|1R6V|A Chain A, Crystal Structure Of Fervidolysin From Fervidobacterium
Pennivorans, A Keratinolytic Enzyme Related To
Subtilisin
Length = 671
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 496 FNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTA 536
++ GTSMA PHV GV +L P+ P IR L TA
Sbjct: 374 YDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTA 414
>pdb|3HJR|A Chain A, Crystal Structure Of Serine Protease Of Aeromonas Sobria
Length = 600
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 498 LMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLD 540
+M+GTS ATP +G LL +A+PD S +R L +A+ +D
Sbjct: 331 VMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVD 373
>pdb|2Z30|A Chain A, Crystal Structure Of Complex Form Between
Mat-Tk-Subtilisin And Tk- Propeptide
Length = 320
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAH 520
+P++ APG +L+++ S + + GT+MATPHV+GV L++AA+
Sbjct: 220 QPEVSAPGVDILSTYPDDS-------------YETLMGTAMATPHVSGVVALIQAAY 263
>pdb|2Z56|A Chain A, Crystal Structure Of G56s-Propeptide:s324a-Subtilisin
Complex
pdb|2Z57|A Chain A, Crystal Structure Of G56e-Propeptide:s324a-Subtilisin
Complex
pdb|2Z58|A Chain A, Crystal Structure Of G56w-Propeptide:s324a-Subtilisin
Complex
Length = 318
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAH 520
+P++ APG +L+++ S + + GT+MATPHV+GV L++AA+
Sbjct: 218 QPEVSAPGVDILSTYPDDS-------------YETLMGTAMATPHVSGVVALIQAAY 261
>pdb|2Z2Z|A Chain A, Crystal Structure Of Unautoprocessed Form Of Tk-subtilisin
Soaked By 10mm Cacl2
Length = 395
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAH 520
+P++ APG +L+++ S + + GT+MATPHV+GV L++AA+
Sbjct: 295 QPEVSAPGVDILSTYPDDS-------------YETLMGTAMATPHVSGVVALIQAAY 338
>pdb|2E1P|A Chain A, Crystal Structure Of Pro-Tk-Subtilisin
Length = 398
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAH 520
+P++ APG +L+++ S + + GT+MATPHV+GV L++AA+
Sbjct: 298 QPEVSAPGVDILSTYPDDS-------------YETLMGTAMATPHVSGVVALIQAAY 341
>pdb|3VHQ|A Chain A, Crystal Structure Of The Ca6 Site Mutant Of
Pro-Sa-Subtilisin
Length = 398
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAH 520
+P++ APG +L+++ S + + GT+MATPHV+GV L++AA+
Sbjct: 298 QPEVSAPGVDILSTYPDDS-------------YETLMGTAMATPHVSGVVALIQAAY 341
>pdb|2ZWP|A Chain A, Crystal Structure Of Ca3 Site Mutant Of Pro-S324a
pdb|2ZWP|B Chain B, Crystal Structure Of Ca3 Site Mutant Of Pro-S324a
Length = 398
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAH 520
+P++ APG +L+++ S + + GT+MATPHV+GV L++AA+
Sbjct: 298 QPEVSAPGVDILSTYPDDS-------------YETLMGTAMATPHVSGVVALIQAAY 341
>pdb|2ZWO|A Chain A, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
pdb|2ZWO|B Chain B, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
pdb|2ZWO|C Chain C, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
Length = 398
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAH 520
+P++ APG +L+++ S + + GT+MATPHV+GV L++AA+
Sbjct: 298 QPEVSAPGVDILSTYPDDS-------------YETLMGTAMATPHVSGVVALIQAAY 341
>pdb|2ZRQ|A Chain A, Crystal Structure Of S324a-Subtilisin
pdb|3A3N|A Chain A, Crystal Structure Of Complex Between Sa-Subtilisin And Tk-
Propeptide With Deletion Of The Two C-Terminal Residues
pdb|3A3O|A Chain A, Crystal Structure Of Complex Between Sa-Subtilisin And Tk-
Propeptide With Deletion Of The Five C-Terminal Residues
Length = 329
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAH 520
+P++ APG +L+++ S + + GT+MATPHV+GV L++AA+
Sbjct: 229 QPEVSAPGVDILSTYPDDS-------------YETLMGTAMATPHVSGVVALIQAAY 272
>pdb|3A3P|A Chain A, Crystal Structure Of Complex Between E201aSA-Subtilisin
And Tk-Propeptide
Length = 329
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAH 520
+P++ APG +L+++ S + + GT+MATPHV+GV L++AA+
Sbjct: 229 QPEVSAPGVDILSTYPDDS-------------YETLMGTAMATPHVSGVVALIQAAY 272
>pdb|1WMF|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-kp43 (oxidized Form, 1.73 Angstrom)
Length = 434
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 447 VDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMAT 506
V +SSRGP + KPD++APG+ +L++ S ++ + + S + GTS AT
Sbjct: 202 VAQFSSRGP--TKDGRIKPDVMAPGTFILSARSSLAPDSSFWAN-HDSKYAYXGGTSXAT 258
Query: 507 PHVAGVAGLLK 517
P VAG L+
Sbjct: 259 PIVAGNVAQLR 269
>pdb|2Z2X|A Chain A, Crystal Structure Of Mature Form Of Tk-Subtilisin
Length = 318
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAH 520
+P++ APG +L+++ S + + GT MATPHV+GV L++AA+
Sbjct: 218 QPEVSAPGVDILSTYPDDS-------------YETLMGTXMATPHVSGVVALIQAAY 261
>pdb|2Z2Y|A Chain A, Crystal Structure Of Autoprocessed Form Of Tk-Subtilisin
pdb|2Z2Y|C Chain C, Crystal Structure Of Autoprocessed Form Of Tk-Subtilisin
Length = 318
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAH 520
+P++ APG +L+++ S + + GT MATPHV+GV L++AA+
Sbjct: 218 QPEVSAPGVDILSTYPDDS-------------YETLMGTCMATPHVSGVVALIQAAY 261
>pdb|4H6W|A Chain A, Structure Of Prenylagaramide Maturation Protease Paga
pdb|4H6W|B Chain B, Structure Of Prenylagaramide Maturation Protease Paga
Length = 306
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 21/83 (25%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLL------K 517
K ILAPG +L A+ G + +SGTS ATP V+GVA LL +
Sbjct: 198 KQGILAPGKDILG--------AKPNGGTIR-----LSGTSFATPIVSGVAALLLSLQIKR 244
Query: 518 AAHPDWSPAAIRSALVTTASPLD 540
PD P +++AL+ +A+P +
Sbjct: 245 GEKPD--PQKVKNALLASATPCN 265
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 15/130 (11%)
Query: 183 SGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRH---GVYSSDVVAA 239
S HGTH +SI FG GIAP+ C + ++ + D+ A
Sbjct: 62 STHGTHVASI----------IFGQHDSPVTGIAPQ-CRGLIVPVFADESLKLSQLDLSRA 110
Query: 240 IDQALQXXXXXXXXXXXXXXNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLIN 299
I+QA+ + D + A E VL++A+ GNDG +
Sbjct: 111 IEQAVNNGANIINVSAGQLTDA-GEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPA 169
Query: 300 GAPWLLTVGA 309
P +L VGA
Sbjct: 170 SLPTVLAVGA 179
>pdb|2WV7|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
Length = 329
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 22/94 (23%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLL-----KAAH 520
DI+APG ++S L S + +SGT+MA PHVAG L+ A
Sbjct: 226 DIVAPG-------------VGIKSTYLDSGYAELSGTAMAAPHVAGALALIINLAEDAFK 272
Query: 521 PDWSPAAIRSALVTTASPLDNTLSHIKDASNNNF 554
S I + LV A+P+ T A N F
Sbjct: 273 RSLSETEIYAQLVRRATPIGFTAQ----AEGNGF 302
>pdb|2X8J|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
Length = 327
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 22/94 (23%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLL-----KAAH 520
DI+APG ++S L S + +SGT+MA PHVAG L+ A
Sbjct: 226 DIVAPG-------------VGIKSTYLDSGYAELSGTAMAAPHVAGALALIINLAEDAFK 272
Query: 521 PDWSPAAIRSALVTTASPLDNTLSHIKDASNNNF 554
S I + LV A+P+ T A N F
Sbjct: 273 RSLSETEIYAQLVRRATPIGFTAQ----AEGNGF 302
>pdb|2X8J|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
Length = 327
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 22/94 (23%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLL-----KAAH 520
DI+APG ++S L S + +SGT+MA PHVAG L+ A
Sbjct: 226 DIVAPG-------------VGIKSTYLDSGYAELSGTAMAAPHVAGALALIINLAEDAFK 272
Query: 521 PDWSPAAIRSALVTTASPLDNTLSHIKDASNNNF 554
S I + LV A+P+ T A N F
Sbjct: 273 RSLSETEIYAQLVRRATPIGFTAQ----AEGNGF 302
>pdb|2XRM|A Chain A, Processed Intracellular Subtilisin From B. Clausii
Length = 311
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 18/79 (22%)
Query: 466 DILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLL-----KAAH 520
DI+APG ++S L S + +SGT+MA PHVAG L+ A
Sbjct: 208 DIVAPG-------------VGIKSTYLDSGYAELSGTAMAAPHVAGALALIINLAEDAFK 254
Query: 521 PDWSPAAIRSALVTTASPL 539
S I + LV A+P+
Sbjct: 255 RSLSETEIYAQLVRRATPI 273
>pdb|3ZXX|A Chain A, Structure Of Self-cleaved Protease Domain Of Pata
Length = 307
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 8/49 (16%)
Query: 499 MSGTSMATPHVAGVAGLL------KAAHPDWSPAAIRSALVTTASPLDN 541
+SGTS ATP V+GVA LL + PD P +R L+ +A P D+
Sbjct: 226 LSGTSFATPIVSGVAALLLSEQVRRGETPD--PQKVRQLLLQSALPCDD 272
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 17/131 (12%)
Query: 183 SGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIW---RHGVYSSDVVAA 239
S HGTH +SI FG GIAP+ C + I+ R + D+
Sbjct: 68 SAHGTHVASI----------IFGQPETSVPGIAPQ-CRGLIVPIFSDDRRRITQLDLARG 116
Query: 240 IDQALQXXXXXXXXXXXXXXNGIFLEDDA-IAVATFAAMEKGVLVVASAGNDGPSYWTLI 298
I++A+ + F E D + A + VL+VA+AGN+G +
Sbjct: 117 IERAVNAGAHIINISGGELTD--FGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVP 174
Query: 299 NGAPWLLTVGA 309
P +L VGA
Sbjct: 175 AALPAVLAVGA 185
>pdb|4H6V|A Chain A, Structure Of Patellamide Maturation Protease Pata
Length = 306
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 8/49 (16%)
Query: 499 MSGTSMATPHVAGVAGLL------KAAHPDWSPAAIRSALVTTASPLDN 541
+SGTS ATP V+GVA LL + PD P +R L+ +A P D+
Sbjct: 217 LSGTSFATPIVSGVAALLLSEQVRRGETPD--PQKVRQLLLQSALPCDD 263
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 17/131 (12%)
Query: 183 SGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIW---RHGVYSSDVVAA 239
S HGTH +SI FG GIAP+ C + I+ R + D+
Sbjct: 59 SAHGTHVASI----------IFGQPETSVPGIAPQ-CRGLIVPIFSDDRRRITQLDLARG 107
Query: 240 IDQALQXXXXXXXXXXXXXXNGIFLEDDA-IAVATFAAMEKGVLVVASAGNDGPSYWTLI 298
I++A+ + F E D + A + VL+VA+AGN+G +
Sbjct: 108 IERAVNAGAHIINISGGELTD--FGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVP 165
Query: 299 NGAPWLLTVGA 309
P +L VGA
Sbjct: 166 AALPAVLAVGA 176
>pdb|3P3Y|A Chain A, Crystal Structure Of Neurofascin Homophilic Adhesion
Complex In Space Group P6522
pdb|3P40|A Chain A, Crystal Structure Of Neurofascin Adhesion Complex In Space
Group P3221
Length = 404
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 274 FAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLGNGVQINFKSL 333
A E G LV + GN P+ ++NG P L +RE G + QI+ +++
Sbjct: 324 LAPGEDGRLVCRANGNPKPTVQWMVNGEP--LQSAPPNPNREVAGDTIIFRDTQISSRAV 381
Query: 334 YPGNSS 339
Y N+S
Sbjct: 382 YQCNTS 387
>pdb|3ZXY|A Chain A, Structure Of S218a Mutant Of The Protease Domain Of Pata
Length = 282
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 17/131 (12%)
Query: 183 SGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIW---RHGVYSSDVVAA 239
S HGTH +SI FG GIAP+ C + I+ R + D+
Sbjct: 49 SAHGTHVASI----------IFGQPETSVPGIAPQ-CRGLIVPIFSDDRRRITQLDLARG 97
Query: 240 IDQALQXXXXXXXXXXXXXXNGIFLEDDA-IAVATFAAMEKGVLVVASAGNDGPSYWTLI 298
I++A+ + F E D + A + VL+VA+AGN+G +
Sbjct: 98 IERAVNAGAHIINISGGELTD--FGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVP 155
Query: 299 NGAPWLLTVGA 309
P +L VGA
Sbjct: 156 AALPAVLAVGA 166
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 8/49 (16%)
Query: 499 MSGTSMATPHVAGVAGLL------KAAHPDWSPAAIRSALVTTASPLDN 541
+SGT+ ATP V+GVA LL + PD P +R L+ +A P D+
Sbjct: 207 LSGTAFATPIVSGVAALLLSEQVRRGETPD--PQKVRQLLLQSALPCDD 253
>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4.
pdb|4F5I|B Chain B, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4
Length = 406
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 261 GIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
G LE+DA + FAAM K L+VAS+ + S + GA L+ + T+DR F
Sbjct: 228 GRGLEEDAEGLRAFAAMHKE-LIVASSCSXNFSLYNERVGACTLVAADSETVDRAF 282
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6.
pdb|4F5K|B Chain B, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6
Length = 406
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 261 GIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
G LE+DA + FAAM K L+VAS+ + S + GA L+ + T+DR F
Sbjct: 228 GRGLEEDAEGLRAFAAMHKE-LIVASSCSXNFSLYNERVGACTLVAADSETVDRAF 282
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLG 323
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F +
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAFS---QMK 276
Query: 324 NGVQINFKS 332
+++N+ S
Sbjct: 277 AAIRVNYSS 285
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLG 323
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F +
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAFS---QMK 276
Query: 324 NGVQINFKS 332
+++N+ S
Sbjct: 277 AAIRVNYSS 285
>pdb|4AKT|A Chain A, Patg Macrocyclase In Complex With Peptide
pdb|4AKT|B Chain B, Patg Macrocyclase In Complex With Peptide
Length = 360
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDW 523
K ILAPG +L + ++GTSMA P + G++ LL +
Sbjct: 265 KEGILAPGEEILGAQPCTEEPVR------------LTGTSMAAPVMTGISALLMSLQVQQ 312
Query: 524 ----SPAAIRSALVTTASPLD 540
A+R+AL+ TA P D
Sbjct: 313 GKPVDAEAVRTALLKTAIPCD 333
>pdb|4AKS|A Chain A, Patg Macrocyclase Domain
pdb|4AKS|B Chain B, Patg Macrocyclase Domain
Length = 360
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDW 523
K ILAPG +L + ++GTSMA P + G++ LL +
Sbjct: 265 KEGILAPGEEILGAQPCTEEPVR------------LTGTSMAAPVMTGISALLMSLQVQQ 312
Query: 524 ----SPAAIRSALVTTASPLD 540
A+R+AL+ TA P D
Sbjct: 313 GKPVDAEAVRTALLKTAIPCD 333
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLG 323
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F +
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAFS---QMK 276
Query: 324 NGVQINFKS 332
+++N+ S
Sbjct: 277 AAIRVNYSS 285
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLG 323
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F +
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAFS---QMK 276
Query: 324 NGVQINFKS 332
+++N+ S
Sbjct: 277 AAIRVNYSS 285
>pdb|4H6X|A Chain A, Structure Of Patellamide Maturation Protease Patg
pdb|4H6X|B Chain B, Structure Of Patellamide Maturation Protease Patg
Length = 357
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 464 KPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDW 523
K ILAPG +L + ++GTSMA P + G++ LL +
Sbjct: 247 KEGILAPGEEILGAQPCTEEPVR------------LTGTSMAAPVMTGISALLMSLQVQQ 294
Query: 524 ----SPAAIRSALVTTASPLD 540
A+R+AL+ TA P D
Sbjct: 295 GKPVDAEAVRTALLKTAIPCD 315
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
Length = 396
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S ++ Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSHNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 261 GIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
G LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 228 GRGLEEDAEGLRAFAAMHKELIVASSCSXNFGLYNERV-GACTLVAADSETVDRAF 282
>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
pdb|1ARI|B Chain B, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
Length = 396
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 261 GIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
G LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 228 GRGLEEDAEGLRAFAAMHKELIVASSCSXNFGLYNERV-GACTLVAADSETVDRAF 282
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
pdb|1TOG|B Chain B, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSXNFALYNERV-GACTLVAADSETVDRAF 272
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|3ZZK|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|4A00|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
Length = 396
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOK|A Chain A, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
pdb|1TOK|B Chain B, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
Length = 396
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSXNFALYNERV-GACTLVAADSETVDRAF 272
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASC|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1SPA|A Chain A, Role Of Asp222 In The Catalytic Mechanism Of Escherichia
Coli Aspartate Aminotransferase: The Amino Acid Residue
Which Enhances The Function Of The Enzyme-Bound Coenzyme
Pyridoxal 5'-Phosphate
Length = 396
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A
Length = 396
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT
pdb|1ARH|B Chain B, Aspartate Aminotransferase, Y225rR386A MUTANT
Length = 396
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f
Length = 396
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L
Length = 396
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L
Length = 396
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant
N194aR292LR386L
Length = 396
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOI|A Chain A, Hydrocinnamic Acid-Bound Structure Of Hexamutant + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant
pdb|1BQA|B Chain B, Aspartate Aminotransferase P195a Mutant
Length = 396
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|2Q04|A Chain A, Crystal Structure Of Acetoin Utilization Protein
(Zp_00540088.1) From Exiguobacterium Sibiricum 255-15 At
2.33 A Resolution
pdb|2Q04|B Chain B, Crystal Structure Of Acetoin Utilization Protein
(Zp_00540088.1) From Exiguobacterium Sibiricum 255-15 At
2.33 A Resolution
pdb|2Q04|C Chain C, Crystal Structure Of Acetoin Utilization Protein
(Zp_00540088.1) From Exiguobacterium Sibiricum 255-15 At
2.33 A Resolution
pdb|2Q04|D Chain D, Crystal Structure Of Acetoin Utilization Protein
(Zp_00540088.1) From Exiguobacterium Sibiricum 255-15 At
2.33 A Resolution
pdb|2Q04|E Chain E, Crystal Structure Of Acetoin Utilization Protein
(Zp_00540088.1) From Exiguobacterium Sibiricum 255-15 At
2.33 A Resolution
pdb|2Q04|F Chain F, Crystal Structure Of Acetoin Utilization Protein
(Zp_00540088.1) From Exiguobacterium Sibiricum 255-15 At
2.33 A Resolution
Length = 211
Score = 30.0 bits (66), Expect = 5.2, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 10/59 (16%)
Query: 270 AVATFAAMEKGVLVVASAGNDGPSYWTLI----------NGAPWLLTVGAGTIDREFEG 318
A+ AA+E+G +++A GND Y T + P++L +GA + F G
Sbjct: 51 ALVEIAALEEGRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRG 109
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli
L-Aspartate Aminotransferase
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms At Ph 6.0
pdb|2QBT|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph 8.0)
pdb|2QA3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph6.5)
pdb|2QB2|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Dihydro-2thiophenecarboylic Acid (Sadta) Via Two
Mechanisms (At Ph 7.0).
pdb|2QB3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-aspartate Aminotransferase By
(s)-4,5-dihydro-2-thiophenecarboxylic Acid (sadta) Via
Two Mechanisms (at Ph 7.5)
pdb|3QN6|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1BQD|A Chain A, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
pdb|1BQD|B Chain B, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
Length = 396
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm.
pdb|4F5M|B Chain B, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm
Length = 406
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 231 LEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERV-GACTLVAADSETVDRAF 282
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 261 GIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
G LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 228 GRGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERV-GACTLVAADSETVDRAF 282
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 261 GIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
G LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 228 GRGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERV-GACTLVAADSETVDRAF 282
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An
Active-Site Mutant Of Aspartate Aminotransferase From
Escherichia Coli
pdb|4DBC|A Chain A, Substrate Activation In Aspartate Aminotransferase
Length = 396
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREF 316
LE+DA + FAAM K ++V +S + Y + GA L+ + T+DR F
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSANFGLYNERV-GACTLVAADSETVDRAF 272
>pdb|1ATG|A Chain A, Azotobacter Vinelandii Periplasmic Molybdate-Binding
Protein
Length = 231
Score = 29.6 bits (65), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 276 AMEKGVLVVASAGNDGPSYWTLINGAPW 303
A + G VV S+G+ GP Y ++NGAP+
Sbjct: 22 AKQTGHAVVISSGSSGPVYAQIVNGAPY 49
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLG 323
LE+DA + FAAM K ++V +S + Y + G L+ + T+DR F +
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GTCTLVAADSETVDRAFS---QMK 276
Query: 324 NGVQINFKS 332
+++N+ S
Sbjct: 277 AAIRVNYSS 285
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 264 LEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLG 323
LE+DA + FAAM K ++V +S + Y + G L+ + T+DR F +
Sbjct: 221 LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV-GTCTLVAADSETVDRAFS---QMK 276
Query: 324 NGVQINFKS 332
+++N+ S
Sbjct: 277 AAIRVNYSS 285
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,310,309
Number of Sequences: 62578
Number of extensions: 889930
Number of successful extensions: 2429
Number of sequences better than 100.0: 153
Number of HSP's better than 100.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 2125
Number of HSP's gapped (non-prelim): 278
length of query: 728
length of database: 14,973,337
effective HSP length: 106
effective length of query: 622
effective length of database: 8,340,069
effective search space: 5187522918
effective search space used: 5187522918
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)