Query 004824
Match_columns 728
No_of_seqs 413 out of 2868
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 06:57:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004824.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004824hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 2E-125 6E-130 1092.8 55.9 628 83-723 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 5E-112 2E-116 982.9 53.2 602 83-724 1-621 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 3.7E-83 1.3E-87 770.4 42.4 536 95-723 6-606 (926)
4 3afg_A Subtilisin-like serine 100.0 1.4E-59 4.9E-64 534.1 30.9 340 38-574 59-418 (539)
5 2z2z_A TK-subtilisin precursor 100.0 4.6E-56 1.6E-60 489.3 21.3 321 38-574 23-392 (395)
6 3t41_A Epidermin leader peptid 100.0 6.4E-55 2.2E-59 492.2 29.3 336 37-575 64-466 (471)
7 1y9z_A Alkaline serine proteas 100.0 1.3E-53 4.3E-58 476.6 28.3 365 95-595 13-437 (441)
8 1r6v_A Subtilisin-like serine 100.0 3.8E-52 1.3E-56 478.6 23.4 347 38-582 52-447 (671)
9 2p4e_P Proprotein convertase s 100.0 4.3E-54 1.5E-58 491.5 3.6 301 39-540 109-423 (692)
10 4h6x_A Thiazoline oxidase/subt 100.0 1.8E-53 6.2E-58 462.2 5.6 303 96-573 21-337 (357)
11 1dbi_A AK.1 serine protease; h 100.0 1.3E-50 4.3E-55 425.3 25.9 259 95-573 20-279 (280)
12 1gci_A Subtilisin; hydrolase, 100.0 1.9E-50 6.6E-55 421.2 24.0 256 95-573 13-269 (269)
13 1r0r_E Subtilisin carlsberg; h 100.0 1.3E-50 4.6E-55 423.9 22.4 257 95-573 13-274 (274)
14 1thm_A Thermitase; hydrolase(s 100.0 6.3E-50 2.1E-54 420.0 25.8 258 95-573 20-278 (279)
15 1to2_E Subtilisin BPN'; serine 100.0 3.5E-50 1.2E-54 422.2 23.3 259 95-574 13-276 (281)
16 3zxy_A Subtilisin-like protein 100.0 6E-51 2.1E-55 428.9 16.4 265 102-573 3-274 (282)
17 2x8j_A Intracellular subtilisi 100.0 2.2E-50 7.4E-55 432.6 19.0 264 95-573 30-310 (327)
18 2ixt_A 36KDA protease; serine 100.0 2.3E-49 7.7E-54 422.7 26.5 281 95-568 15-309 (310)
19 4h6w_A N-terminal cyanobactin 100.0 3.4E-50 1.2E-54 428.4 14.2 271 96-573 11-287 (306)
20 2z30_A TK-subtilisin; thermoco 100.0 1.3E-49 4.5E-54 425.9 18.6 265 95-574 17-317 (320)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 9.8E-50 3.3E-54 432.2 16.2 271 95-574 32-329 (347)
22 3lpc_A APRB2; protease, subtil 100.0 1.4E-48 4.7E-53 422.1 19.6 299 95-574 21-337 (340)
23 1wmd_A Protease; alpha-beta hy 100.0 6.6E-48 2.2E-52 430.0 22.1 291 96-575 11-319 (434)
24 1sh7_A Extracellular subtilisi 100.0 1E-46 3.4E-51 396.0 26.7 236 96-541 19-258 (284)
25 3lxu_X Tripeptidyl-peptidase 2 100.0 3.3E-47 1.1E-51 454.7 25.5 362 180-724 267-654 (1354)
26 2b6n_A Proteinase K; S binding 100.0 3E-46 1E-50 391.8 25.7 237 96-540 21-261 (278)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 4.1E-46 1.4E-50 390.7 25.0 237 96-542 21-261 (276)
28 2pwa_A Proteinase K; structure 100.0 2.9E-46 9.9E-51 391.5 21.1 228 98-540 24-260 (279)
29 2oxa_A Extracellular serine pr 100.0 8.1E-47 2.8E-51 437.1 16.7 299 95-578 59-429 (600)
30 1p8j_A Furin precursor; prohor 100.0 1.1E-45 3.8E-50 415.6 18.4 292 95-575 27-331 (471)
31 2qtw_B Proprotein convertase s 100.0 8E-45 2.7E-49 405.0 23.3 279 98-573 18-313 (546)
32 3f7m_A Alkaline serine proteas 100.0 7.4E-45 2.5E-49 381.8 20.2 229 98-541 25-262 (279)
33 2id4_A Kexin; KEX2, kexin, fur 100.0 1.3E-44 4.5E-49 409.6 19.7 285 95-576 43-344 (503)
34 3hjr_A Extracellular serine pr 100.0 1E-42 3.5E-47 404.0 19.8 298 95-575 59-426 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 1.3E-24 4.3E-29 246.7 8.5 97 211-313 274-384 (552)
36 1ga6_A Serine-carboxyl protein 99.8 2.2E-21 7.6E-26 209.9 12.8 101 212-313 90-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 98.9 3.9E-10 1.3E-14 127.0 5.5 100 212-312 262-374 (544)
38 2w2n_P Proprotein convertase s 98.6 1.8E-08 6.3E-13 89.7 3.5 64 7-81 50-113 (114)
39 3icu_A E3 ubiquitin-protein li 98.3 2E-06 6.9E-11 83.2 10.1 88 349-436 84-187 (194)
40 3cnq_P Subtilisin BPN'; unclea 98.2 1.6E-06 5.4E-11 72.0 5.6 47 38-85 33-79 (80)
41 2qtw_A Proprotein convertase s 98.0 3E-06 1E-10 76.3 3.6 44 38-81 80-123 (124)
42 1v5i_B POIA1, IA-1=serine prot 97.6 4.9E-05 1.7E-09 62.2 4.9 43 39-81 30-75 (76)
43 2z30_B TK-subtilisin; thermoco 96.7 0.0015 5E-08 51.6 4.2 44 36-80 20-63 (65)
44 2ek8_A Aminopeptidase; metallo 96.7 0.0065 2.2E-07 66.5 10.9 83 341-423 93-182 (421)
45 3kas_A Transferrin receptor pr 95.9 0.0073 2.5E-07 69.3 5.9 82 342-423 109-230 (640)
46 3fed_A Glutamate carboxypeptid 95.1 0.015 5.3E-07 67.3 5.3 53 341-393 127-187 (707)
47 2ys4_A Hydrocephalus-inducing 94.6 0.11 3.8E-06 46.1 8.5 74 636-718 41-114 (122)
48 3iib_A Peptidase M28; YP_92679 94.5 0.1 3.5E-06 57.4 9.6 95 341-436 106-227 (444)
49 3lxu_X Tripeptidyl-peptidase 2 88.5 0.3 1E-05 59.7 4.6 24 102-125 32-55 (1354)
50 2e6j_A Hydin protein; PAPD, st 85.5 4.5 0.00015 34.6 9.5 68 637-708 27-95 (112)
51 1y9z_A Alkaline serine proteas 80.8 1 3.6E-05 49.2 4.1 31 442-480 181-211 (441)
52 2r39_A FIXG-related protein; s 79.4 7.1 0.00024 34.0 8.4 55 637-693 32-86 (118)
53 3qbt_B Inositol polyphosphate 78.7 17 0.00057 32.7 10.9 84 638-723 45-138 (140)
54 2qsv_A Uncharacterized protein 76.8 12 0.0004 36.5 10.0 81 637-721 20-104 (220)
55 1m1s_A WR4; structural genomic 75.5 25 0.00085 30.6 10.5 51 636-691 25-75 (116)
56 3qis_A Inositol polyphosphate 59.5 70 0.0024 33.6 12.2 85 637-723 47-141 (366)
57 3idu_A Uncharacterized protein 56.6 45 0.0015 29.4 8.5 51 636-690 33-84 (127)
58 1w8o_A Bacterial sialidase; 3D 56.3 69 0.0024 35.8 12.4 79 617-707 363-442 (601)
59 1row_A SSP-19, MSP-domain prot 47.8 68 0.0023 27.3 8.0 49 640-691 19-67 (109)
60 1z9l_A Vesicle-associated memb 46.6 48 0.0016 29.0 7.1 52 637-691 28-79 (128)
61 2qsv_A Uncharacterized protein 43.1 1.2E+02 0.0042 29.0 10.1 78 637-718 135-216 (220)
62 1wic_A Hypothetical protein ri 42.6 52 0.0018 29.9 6.8 50 639-691 38-87 (152)
63 2kq1_A BH0266 protein; solutio 42.4 7.4 0.00025 34.0 1.0 52 639-690 56-109 (119)
64 1msp_A MSP, major sperm protei 40.4 64 0.0022 28.2 6.8 48 640-690 29-76 (126)
65 2l04_A Major tail protein V; b 39.3 42 0.0014 27.7 5.1 27 665-692 8-34 (91)
66 3isy_A Bsupi, intracellular pr 39.1 1.1E+02 0.0038 26.6 8.0 71 636-707 18-105 (120)
67 2cri_A Vesicle-associated memb 36.0 62 0.0021 29.1 6.2 50 639-691 34-83 (147)
68 3sd2_A Putative member of DUF3 35.9 1.9E+02 0.0063 24.3 8.4 66 620-705 35-100 (101)
69 2x41_A Beta-glucosidase; hydro 35.3 55 0.0019 37.8 7.1 55 636-691 615-677 (721)
70 1wgl_A TOLL-interacting protei 34.5 23 0.00078 26.8 2.4 32 505-536 5-36 (59)
71 3zyz_A Beta-D-glucoside glucoh 33.5 1.1E+02 0.0038 35.2 9.2 55 636-691 613-674 (713)
72 3rfr_A PMOB; membrane, oxidore 31.8 80 0.0027 33.1 6.8 49 636-690 298-368 (419)
73 3q48_A Chaperone CUPB2; IG fol 24.9 3.6E+02 0.012 26.5 10.1 53 638-691 44-104 (257)
74 3abz_A Beta-glucosidase I; gly 24.0 2.4E+02 0.0083 33.1 10.0 44 495-538 618-662 (845)
75 1ni7_A ER75, hypothetical prot 23.6 54 0.0019 29.9 3.4 34 497-531 77-110 (155)
76 2l0d_A Cell surface protein; s 20.7 3.3E+02 0.011 23.3 7.6 24 636-659 19-43 (114)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=1.6e-125 Score=1092.83 Aligned_cols=628 Identities=49% Similarity=0.817 Sum_probs=572.4
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeecc
Q 004824 83 TTHTSEFLGLSSLSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFN 162 (728)
Q Consensus 83 ~~~s~~~~g~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~ 162 (728)
|+++|+|+|+.+...+|..+++|+||+|||||||||++||+|.+.+++++|.+|+|.|+.+.+|+...||+|++++++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 57899999998778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCccCCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCCCChHHHHHHHHH
Q 004824 163 KGLIANNPKLKVRMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGVYSSDVVAAIDQ 242 (728)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g~~~~~i~~ai~~ 242 (728)
++++....+...+..+++|..||||||||||||+.+++.+++|++.|.+.|+||+|+|++||+|+..|+..+++++||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai~~ 160 (649)
T 3i6s_A 81 KGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMDQ 160 (649)
T ss_dssp HHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHHHH
T ss_pred CcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHHHH
Confidence 87754433334455678999999999999999999988889999999999999999999999999988999999999999
Q ss_pred HHHCCCcEEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEeccccccceeeeEEEc
Q 004824 243 ALQDGVDVLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTL 322 (728)
Q Consensus 243 a~~~g~dVIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~ap~vitVgast~~~~~~~~~~~ 322 (728)
|+++|+||||||||. ...++..+.+.+++++|.++|++||+||||+|+...++++.+||+|+|||+++||.|...+.+
T Consensus 161 A~~~gvdVIn~SlG~--~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~l 238 (649)
T 3i6s_A 161 AVADGVDMISISYGY--RFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTL 238 (649)
T ss_dssp HHHTTCSEEEECCCC--CSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEE
T ss_pred HHHcCCCEEEeCCcc--CCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEe
Confidence 999999999999999 566778899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEeeeecCCCCCCCCeeeEEEc---cCCCCCccCcc-C--cceEEEEc-cCCchhHHHHHHHHcCceEEEEecCCC
Q 004824 323 GNGVQINFKSLYPGNSSPSQVSLAFM---DACDSVTELKK-V--INSIVVCR-EDSSISSQIDNAVAAGVLGAVFISNSA 395 (728)
Q Consensus 323 ~~g~~~~g~s~~~~~~~~~~~~lv~~---~~c~~~~~~~~-~--~gkiv~~~-g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 395 (728)
+|++.+.|.+++........+|+++. ..|.+..+++. + +||||+|+ |.|.+.+|..+++++|+.|+|++|+.
T Consensus 239 gng~~~~g~sl~~~~~~~~~~plv~~~~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~- 317 (649)
T 3i6s_A 239 GNGLKIRGWSLFPARAFVRDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDP- 317 (649)
T ss_dssp TTSCEEEEECCCSSCBCEEEEEEECCTTTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCG-
T ss_pred CCCcEEeeeecccCcccCcceeeEecccccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCc-
Confidence 99999999999988766678999995 58999888876 7 99999999 99999999999999999999999987
Q ss_pred ccccccccCc-cEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCce
Q 004824 396 LLEVYIRSSF-PAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLV 474 (728)
Q Consensus 396 ~~~~~~~~~~-p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I 474 (728)
.....+.+. |+++|+..+|+.|++|++++.+++++|.+..+..+....+.+++||||||+.+.+++|||||+|||++|
T Consensus 318 -~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~I 396 (649)
T 3i6s_A 318 -GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLI 396 (649)
T ss_dssp -GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEEECSSE
T ss_pred -cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEEeCCCCe
Confidence 233445555 999999999999999999999999999999999988899999999999999988889999999999999
Q ss_pred eeccCCCCCccccccCc-ccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCC
Q 004824 475 LASWSPISSVAEVQSGL-LYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNN 553 (728)
Q Consensus 475 ~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~ 553 (728)
+++|+..........+. +...|..+||||||||||||+||||||+||+|+|++||++||+||+++++.+.++.+... .
T Consensus 397 lsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~~-~ 475 (649)
T 3i6s_A 397 LAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSDN-N 475 (649)
T ss_dssp EEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEETTT-S
T ss_pred EeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCccccccc-C
Confidence 99999865554444333 447899999999999999999999999999999999999999999999999999887643 6
Q ss_pred CCCCCCccCCCccCccccCCCCceecCChhhHHHHHHhcCCCccceeeccccccc--cCCCCCCCCCCceeeec-cCCCC
Q 004824 554 FPASPLDMGAGHINPNKALDPGLVYDATAEDYIKLLCAMNYKPEQIRIFTKSSQK--CNNRSLDLNYPSFITFF-NDYDS 630 (728)
Q Consensus 554 ~~~~~~~~G~G~in~~~Al~~~lv~~~~~~dy~~~lc~~~~~~~~~~~~~~~~~~--c~~~~~~ln~psi~~~~-~~~~~ 630 (728)
.++++++||+|+||+.+|++||||||+..+||++|||++||+..+|+.|++.+.. |+..+.+||||||++.+ +.
T Consensus 476 ~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~~~~~lNyPs~~~~~~~~--- 552 (649)
T 3i6s_A 476 KAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSNPSADLNYPSFIALYSIE--- 552 (649)
T ss_dssp SBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCCCCCCCCCSSEEEEECCS---
T ss_pred CcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCCchhhcCCCcEEeecccC---
Confidence 7889999999999999999999999999999999999999999999999988777 98767899999999987 42
Q ss_pred CCCCcee-----EEEEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEecccCCCceEEEEEEE
Q 004824 631 SSDEKVV-----KEFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGPKLLEKDVVYGSISW 705 (728)
Q Consensus 631 ~~~~~~~-----~t~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G~i~~ 705 (728)
.+ +||+|||||||+..++|+++++.|.|++|+|+|++|+|.+.+|+++|+|||+......+.|.||+|+|
T Consensus 553 -----~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~w 627 (649)
T 3i6s_A 553 -----GNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITW 627 (649)
T ss_dssp -----SCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEEE
T ss_pred -----CCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEEEEEEE
Confidence 23 89999999999989999999999999999999999999989999999999998654456789999999
Q ss_pred EeCCCCcEEEeEEEEEee
Q 004824 706 VDDDGRYEVRSPIVATNL 723 (728)
Q Consensus 706 ~~~~~~~~v~~P~~~~~~ 723 (728)
++++|+|.||+||+|++.
T Consensus 628 ~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 628 VEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EETTSCCEEEEEEEEEEC
T ss_pred EcCCCCeEEEEeEEEEEc
Confidence 996689999999999875
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=5.4e-112 Score=982.90 Aligned_cols=602 Identities=39% Similarity=0.655 Sum_probs=506.4
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeecc
Q 004824 83 TTHTSEFLGLSSLSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFN 162 (728)
Q Consensus 83 ~~~s~~~~g~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~ 162 (728)
++++|+||||+ ..+|.+..+|+||+|||||||||++||+|.++++++++.+|+|.|+.+.+|. ||+|++++++|.
T Consensus 1 tt~s~~flGl~--~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~---~n~k~ig~~~~~ 75 (621)
T 3vta_A 1 TTRSWDFLGFP--LTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSYH 75 (621)
T ss_dssp CCSHHHHTTCC--TTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCC---CCSSEEEEEECC
T ss_pred CCCChhHcCCC--ccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcc---cCcceeeeeecc
Confidence 57899999995 4689999999999999999999999999999999999999999999999886 999999999998
Q ss_pred ccccccCCCCccCCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCCCChHHHHHHHHH
Q 004824 163 KGLIANNPKLKVRMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGVYSSDVVAAIDQ 242 (728)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g~~~~~i~~ai~~ 242 (728)
.+.... ..+..+++|.+||||||||||||+.+.+.+.+|++.|.++|+||+|+|++||+|++.||..+++++||++
T Consensus 76 ~~~~~~----~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~~~ 151 (621)
T 3vta_A 76 IGRPIS----PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDD 151 (621)
T ss_dssp CSSSCC----TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHHHH
T ss_pred cCCccC----CCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHHHH
Confidence 765322 2344578899999999999999999888888888889999999999999999999999999999999999
Q ss_pred HHHCCCcEEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEeccccccceeeeEEEc
Q 004824 243 ALQDGVDVLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTL 322 (728)
Q Consensus 243 a~~~g~dVIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~ap~vitVgast~~~~~~~~~~~ 322 (728)
|+++|+||||||||+. ....++.+++++++++|.++||+||+||||+|+...++++.+||+++|++++.++.|...+.+
T Consensus 152 a~~~g~dVin~SlG~~-~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~ 230 (621)
T 3vta_A 152 AIADGVDIISLSVGGA-NPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQI 230 (621)
T ss_dssp HHHHTCSEEEECCCCC-CGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEE
T ss_pred HHHhCCCEEEecCCCC-CCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEe
Confidence 9999999999999984 445567788999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEeeeecCCCCCCCCeeeEEEc-------------cCCCCCccCcc-CcceEEEEccCCchhHHHHHHHHcCceEE
Q 004824 323 GNGVQINFKSLYPGNSSPSQVSLAFM-------------DACDSVTELKK-VINSIVVCREDSSISSQIDNAVAAGVLGA 388 (728)
Q Consensus 323 ~~g~~~~g~s~~~~~~~~~~~~lv~~-------------~~c~~~~~~~~-~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~ 388 (728)
+++..+.+.+++... ...+++++. ..|.+..+++. ++|||++|+ +.+..+.......|+.++
T Consensus 231 ~~~~~~~~~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~--~~~~~~~~~~~~~Ga~gv 306 (621)
T 3vta_A 231 GNGQSFQGVSINTFD--NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCE--ASFGPHEFFKSLDGAAGV 306 (621)
T ss_dssp TTSCEEEEBCCCCSC--CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECS--SCCCHHHHHHHHTTCSEE
T ss_pred ccCceeeeeecccCC--CcccccccccccccccccccccccccccccccccccceEEEEe--cCCChhHHhhhhcceeEE
Confidence 999999998876544 245666653 67888888887 999999998 224456778888999999
Q ss_pred EEecCCCccccccccC-ccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcE
Q 004824 389 VFISNSALLEVYIRSS-FPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDI 467 (728)
Q Consensus 389 i~~n~~~~~~~~~~~~-~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI 467 (728)
|++++... ..+.+ +|...++..++..|+.|+..+..+.+.+....+ ......+.++.||||||+....+++||||
T Consensus 307 i~~~~~~~---~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~-~~~~~~~~va~FSSrGP~~~~~~ilKPDI 382 (621)
T 3vta_A 307 LMTSNTRD---YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTT-ILNASAPVVVSFSSRGPNRATKDVIKPDI 382 (621)
T ss_dssp EEECSCCS---SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEE-EECTTCCCBCTTSCCCSCTTCTTSCSCCE
T ss_pred EEEecCCC---cccccccceEEECHHHHHHHHHHHhccCCcceEEecceE-eccCCCCceeeecCCCCCCCCCCeecccc
Confidence 99987654 12233 499999999999999999999988888755444 34567889999999999987778899999
Q ss_pred EeCCCceeeccCCCCCccccccCcccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCccc
Q 004824 468 LAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547 (728)
Q Consensus 468 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~ 547 (728)
+|||++|+|+|+....... ......|..+||||||||||||+||||||+||+|+|++||++||+||++++..
T Consensus 383 ~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~----- 454 (621)
T 3vta_A 383 SGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNAR----- 454 (621)
T ss_dssp EEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTT-----
T ss_pred ccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCccccc-----
Confidence 9999999999986543322 22347899999999999999999999999999999999999999999988654
Q ss_pred cCCCCCCCCCCCccCCCccCccccCCCCceecCChhhHHHHHHhcCCCccceeeccccccccCCC----CCCCCCCceee
Q 004824 548 DASNNNFPASPLDMGAGHINPNKALDPGLVYDATAEDYIKLLCAMNYKPEQIRIFTKSSQKCNNR----SLDLNYPSFIT 623 (728)
Q Consensus 548 d~~~~~~~~~~~~~G~G~in~~~Al~~~lv~~~~~~dy~~~lc~~~~~~~~~~~~~~~~~~c~~~----~~~ln~psi~~ 623 (728)
..++.+++||+|+||+.+|++||||||+..+||+.|||+++|+..+++.+++....|+.. ..+||||||++
T Consensus 455 -----~~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v 529 (621)
T 3vta_A 455 -----FNPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGL 529 (621)
T ss_dssp -----TCTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGGGSCCSSEEE
T ss_pred -----CCCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCcccccccccEEE
Confidence 345678899999999999999999999999999999999999999999999887888653 46999999999
Q ss_pred eccCCCCCCCCceeEEEEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEecccCCCceEEEEE
Q 004824 624 FFNDYDSSSDEKVVKEFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGPKLLEKDVVYGSI 703 (728)
Q Consensus 624 ~~~~~~~~~~~~~~~t~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G~i 703 (728)
.+.. .. ..+++|+|||||||....||+++++.|.|++|+|+|++|+|.+.+|+++|+|||+.. .++.++||+|
T Consensus 530 ~~~~---~~--~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~--~~~~~~~g~l 602 (621)
T 3vta_A 530 SVSP---SQ--TFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGS--IKGFVVSASL 602 (621)
T ss_dssp ECCS---SC--CEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEEC--CCSSEEEEEE
T ss_pred EccC---CC--ceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEec--CCCceEEEEE
Confidence 7542 12 478999999999999999999999999999999999999999889999999999863 4678999999
Q ss_pred EEEeCCCCcEEEeEEEEEeeC
Q 004824 704 SWVDDDGRYEVRSPIVATNLV 724 (728)
Q Consensus 704 ~~~~~~~~~~v~~P~~~~~~~ 724 (728)
+|++ |+|.||+||+|+..+
T Consensus 603 ~w~d--~~h~Vr~Pi~v~~~i 621 (621)
T 3vta_A 603 VWSD--GVHYVRSPITITSLV 621 (621)
T ss_dssp EEEC--SSCCCEEEEEEECC-
T ss_pred EEEc--CCEEEEeCEEEEEeC
Confidence 9998 999999999998753
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=3.7e-83 Score=770.42 Aligned_cols=536 Identities=23% Similarity=0.284 Sum_probs=421.5
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcc----------CcccCCceeeeeeecccc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQF----------NSSLCNKKLIGARFFNKG 164 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f----------~~~~~n~kiig~~~~~~~ 164 (728)
++.+|.++++|+||+|||||||||++||+|.+. ..|++.|..+..| ...+||+|++++++|.++
T Consensus 6 ~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~ 79 (926)
T 1xf1_A 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKD 79 (926)
T ss_dssp CHHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCC
T ss_pred cHHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccC
Confidence 366899999999999999999999999999853 4677766544333 134799999999998764
Q ss_pred ccccCCCCccCCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC--CChHHHHHHHHH
Q 004824 165 LIANNPKLKVRMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG--VYSSDVVAAIDQ 242 (728)
Q Consensus 165 ~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g--~~~~~i~~ai~~ 242 (728)
. ...|..||||||||||||+.+.+.+. .+.+.||||+|+|++||+|+..+ +..+++++||+|
T Consensus 80 ~------------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~ 143 (926)
T 1xf1_A 80 G------------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRD 143 (926)
T ss_dssp S------------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHH
T ss_pred C------------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHH
Confidence 2 12288999999999999997654332 24469999999999999998876 556789999999
Q ss_pred HHHCCCcEEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCC-------------Cccc--cCCCceEEe
Q 004824 243 ALQDGVDVLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSY-------------WTLI--NGAPWLLTV 307 (728)
Q Consensus 243 a~~~g~dVIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~-------------~~~~--~~ap~vitV 307 (728)
|+++|+||||||||........+.+.+..++..|.++||+||+||||+|+.. .++. ..+||+|+|
T Consensus 144 Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitV 223 (926)
T 1xf1_A 144 AINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTV 223 (926)
T ss_dssp HHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEE
T ss_pred HHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEE
Confidence 9999999999999984112344567888899999999999999999999632 2233 348999999
Q ss_pred ccccccceeeeEEEc-CCCcEEeeeecCCCC--CCCCeeeEEEc-cCCCCCccCccCcceEEEEc-cCCchhHHHHHHHH
Q 004824 308 GAGTIDREFEGSLTL-GNGVQINFKSLYPGN--SSPSQVSLAFM-DACDSVTELKKVINSIVVCR-EDSSISSQIDNAVA 382 (728)
Q Consensus 308 gast~~~~~~~~~~~-~~g~~~~g~s~~~~~--~~~~~~~lv~~-~~c~~~~~~~~~~gkiv~~~-g~~~~~~~~~~~~~ 382 (728)
||++.++.+...+.+ +++....+.+++... ...+.+++++. ..|.+..+ .+++||||+|+ |.|.+.+|..++++
T Consensus 224 gA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~g~~~~~~-~~v~Gkivl~~rg~~~~~~k~~~~~~ 302 (926)
T 1xf1_A 224 ASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANRGTKEDDF-KDVKGKIALIERGDIDFKDKIAKAKK 302 (926)
T ss_dssp EEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTTSCSTTTT-TTCTTSEEEEECCSSCHHHHHHHHHH
T ss_pred eccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCCCCCccch-hhcCCeEEEEECCCCCHHHHHHHHHh
Confidence 999999999888887 555444444433211 12568999996 45776666 45999999999 99999999999999
Q ss_pred cCceEEEEecCCCc-cc--cccccCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeE--ecccCCCccccccCCCCCC
Q 004824 383 AGVLGAVFISNSAL-LE--VYIRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTV--IGTKPAPMVDSYSSRGPFL 457 (728)
Q Consensus 383 ~Ga~g~i~~n~~~~-~~--~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~a~fSS~GP~~ 457 (728)
+|+.|+|++|+... .. ......+|++.++..+|+.|+. .+..+|.+..+. +.....+.++.||||||+.
T Consensus 303 ~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~------~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~~ 376 (926)
T 1xf1_A 303 AGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD------NPQKTITFNATPKVLPTASGTKLSRFSSWGLTA 376 (926)
T ss_dssp TTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH------CSSCEEEECSSCEEEECSSCSBCCTTSCCCBCT
T ss_pred CCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh------CCceEEEecccceecccCCcceeccccCCCCCC
Confidence 99999999998765 21 1122345999999999998873 345566666543 4556678999999999997
Q ss_pred CCCCCCCCcEEeCCCceeeccCCCCCccccccCcccCCceeeccccchhHHHHHHHHHHh----hhCCCCCHHH----HH
Q 004824 458 SCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLK----AAHPDWSPAA----IR 529 (728)
Q Consensus 458 ~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----~~~p~lsp~~----ik 529 (728)
+. ++||||+|||++|+++++. +.|..+||||||||||||+||||+ +.||+|+|+| ||
T Consensus 377 ~~--~lKPDI~APG~~I~sa~~~-------------~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Ik 441 (926)
T 1xf1_A 377 DG--NIKPDIAAPGQDILSSVAN-------------NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAK 441 (926)
T ss_dssp TS--CBSCCEEEECCCEEESSSC-------------SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHH
T ss_pred CC--ccCceEECCCCCEEeeccC-------------CcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 64 5999999999999999985 589999999999999999999995 5699999997 99
Q ss_pred HHHHhccccCCCCCCccccCCCCCCCCCCCccCCCccCccccCCCCceecCChhhHHHHHHhcCCCccceeecccccccc
Q 004824 530 SALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPNKALDPGLVYDATAEDYIKLLCAMNYKPEQIRIFTKSSQKC 609 (728)
Q Consensus 530 ~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~G~G~in~~~Al~~~lv~~~~~~dy~~~lc~~~~~~~~~~~~~~~~~~c 609 (728)
++||+||+++...+. ..++++++||+|+||+.+|+++.+ |||..+++..
T Consensus 442 s~L~~TA~~~~~~~~--------~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~------------ 490 (926)
T 1xf1_A 442 KVLMSSATALYDEDE--------KAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSS------------ 490 (926)
T ss_dssp HHHHHHSBCCEEGGG--------TEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS------------
T ss_pred HHHHhcCCCcccCCC--------CccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcc------------
Confidence 999999998754321 234578899999999999999865 5676654321
Q ss_pred CCCCCCCCCCceeeeccCCCCCCCCceeEEEEEEEEeCCCC--CeEEEEEEec--CCCeEEEEEeceEEEec-------c
Q 004824 610 NNRSLDLNYPSFITFFNDYDSSSDEKVVKEFWRTVTNAEEV--GTAYTAKLTG--IDGLKVYVEPRRLVFKQ-------K 678 (728)
Q Consensus 610 ~~~~~~ln~psi~~~~~~~~~~~~~~~~~t~~rtvtn~g~~--~~ty~~~~~~--~~g~~v~v~p~~~~~~~-------~ 678 (728)
+|.+.... .+++++|||||+|+. ..+|++.+.. |.+..++|+|..|.|.. +
T Consensus 491 ----------~i~l~~~~--------~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~a 552 (926)
T 1xf1_A 491 ----------KVHLNNVS--------DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPA 552 (926)
T ss_dssp ----------CEEEEEEC--------SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECT
T ss_pred ----------eeeccccC--------ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECC
Confidence 23333221 468899999999985 4678887765 77889999888776654 4
Q ss_pred CeeEEEEEEEEecc--------cCCCceEEEEEEEEeCCCCcE-EEeEEEEEee
Q 004824 679 YEKQSYKLTLEGPK--------LLEKDVVYGSISWVDDDGRYE-VRSPIVATNL 723 (728)
Q Consensus 679 g~~~~~~vt~~~~~--------~~~~~~~~G~i~~~~~~~~~~-v~~P~~~~~~ 723 (728)
||+++|+|||++.. ..++.++||+|+|++.++.|. ||+||+++..
T Consensus 553 g~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~g 606 (926)
T 1xf1_A 553 NSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFRG 606 (926)
T ss_dssp TEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEES
T ss_pred CCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEec
Confidence 99999999999741 234568999999997557665 9999999854
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.4e-59 Score=534.12 Aligned_cols=340 Identities=32% Similarity=0.509 Sum_probs=275.0
Q ss_pred cccEEEEecceeeEEEEEeCHHHHHHH-----------hcCCCeEEEecCCcccccCCCC--ccccCCCCCCCCCCCCCC
Q 004824 38 SSKLVYTYANSIHGFSATLTVSELETL-----------KKLPGYISSTPDRPLAVHTTHT--SEFLGLSSLSGAWPASNY 104 (728)
Q Consensus 38 ~~~i~~~y~~~~ngfs~~l~~~~~~~L-----------~~~p~V~~V~~~~~~~~~~~~s--~~~~g~~~~~~~~~~~~~ 104 (728)
+.+++|+|+ .|+||+++++++++++| +++|+|++|+++..+++..... ...+...+...+|..+++
T Consensus 59 g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (539)
T 3afg_A 59 GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYD 137 (539)
T ss_dssp TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCBCSCCBCCSCC
T ss_pred CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCccccCCccccccCcHhHHhcCCC
Confidence 578999997 79999999999999999 8999999999999887643221 111222345679999999
Q ss_pred CCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCccCCCCCCCCCC
Q 004824 105 GKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKVRMNSPRDGSG 184 (728)
Q Consensus 105 G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~d~~g 184 (728)
|+||+|||||||||++||+|.++ +++.++|..+. ..+.|..|
T Consensus 138 G~gv~VaViDtGid~~Hpdl~~~---------------------------i~~~~d~~~~~-----------~~~~D~~g 179 (539)
T 3afg_A 138 GSGITIGIIDTGIDASHPDLQGK---------------------------VIGWVDFVNGK-----------TTPYDDNG 179 (539)
T ss_dssp CTTCEEEEEESBCCTTSGGGTTT---------------------------EEEEEETTTCC-----------SSCCBSSS
T ss_pred CCCcEEEEEecCCCCCChHHhCC---------------------------EeeeEECCCCC-----------CCCCCCCC
Confidence 99999999999999999999753 56666665431 24678899
Q ss_pred ChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHC----CCcEEEeccccCC
Q 004824 185 HGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQD----GVDVLSLSLGLSL 259 (728)
Q Consensus 185 HGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~----g~dVIN~SlG~~~ 259 (728)
|||||||||||+.... .|.+.||||+|+|+.+|+++..| +..+++++||+||+++ |++|||||||.
T Consensus 180 HGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~-- 250 (539)
T 3afg_A 180 HGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGS-- 250 (539)
T ss_dssp HHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCC--
T ss_pred CHHHHHHHHhCcCccC-------CCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCC--
Confidence 9999999999975321 23358999999999999998876 7789999999999976 89999999998
Q ss_pred CCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCC--ccccCCCceEEeccccccceeeeEEEcCCCcEEeeeecCCCC
Q 004824 260 NGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYW--TLINGAPWLLTVGAGTIDREFEGSLTLGNGVQINFKSLYPGN 337 (728)
Q Consensus 260 ~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~--~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~g~s~~~~~ 337 (728)
.......+.+..++.++.++|++||+||||+|+... ..+..++++|+|||++
T Consensus 251 ~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~-------------------------- 304 (539)
T 3afg_A 251 SQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVD-------------------------- 304 (539)
T ss_dssp CSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEEC--------------------------
T ss_pred CCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeec--------------------------
Confidence 333445677888888999999999999999998654 3466789999999842
Q ss_pred CCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEEeecccHHH
Q 004824 338 SSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAFINVNDGQT 417 (728)
Q Consensus 338 ~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~i~~~~g~~ 417 (728)
T Consensus 305 -------------------------------------------------------------------------------- 304 (539)
T 3afg_A 305 -------------------------------------------------------------------------------- 304 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccccCcccCCce
Q 004824 418 IIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFN 497 (728)
Q Consensus 418 l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~ 497 (728)
..+.+++||||||+.+++ +||||+|||++|+++++...... +.....|.
T Consensus 305 -------------------------~~~~~a~fSs~Gp~~~~~--~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~ 353 (539)
T 3afg_A 305 -------------------------KYDVITDFSSRGPTADNR--LKPEVVAPGNWIIAARASGTSMG----QPINDYYT 353 (539)
T ss_dssp -------------------------TTSCBCSSSCCCCCTTCB--CCCSEEEECSSEEEECCTTCCCS----EECSSSEE
T ss_pred -------------------------CCcccccccCCCCCCCCC--CcccEecCcCCEEeeccCCCCCC----CCCccccc
Confidence 123679999999998755 99999999999999986532110 11124699
Q ss_pred eeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCccCCCccCccccCCC
Q 004824 498 LMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPNKALDP 574 (728)
Q Consensus 498 ~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~G~G~in~~~Al~~ 574 (728)
.++|||||||||||++|||+|++|+|+|++||++|++||+++...+ ..++.||+|+||+.+|++.
T Consensus 354 ~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~------------~~~~~~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 354 AAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDE------------IADIAYGAGRVNAYKAAYY 418 (539)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGG------------CSBTTTBTCBCCHHHHHTG
T ss_pred ccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC------------CCccCccCCccCHHHHhhh
Confidence 9999999999999999999999999999999999999999875321 1345899999999999984
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=4.6e-56 Score=489.34 Aligned_cols=321 Identities=26% Similarity=0.400 Sum_probs=262.2
Q ss_pred cccEEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEecCCcccccCCCCc-----------cccCCC--CCCCCCCCCCC
Q 004824 38 SSKLVYTYANSIHGFSATLTVSELETLKKLPGYISSTPDRPLAVHTTHTS-----------EFLGLS--SLSGAWPASNY 104 (728)
Q Consensus 38 ~~~i~~~y~~~~ngfs~~l~~~~~~~L~~~p~V~~V~~~~~~~~~~~~s~-----------~~~g~~--~~~~~~~~~~~ 104 (728)
+.+++++|. .+++|+++++++++++|+++|+|++|+++..++++....+ ..|++. +...+|..+ +
T Consensus 23 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~ 100 (395)
T 2z2z_A 23 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT-D 100 (395)
T ss_dssp TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCGGGGGTC-S
T ss_pred CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHHHHHhhc-C
Confidence 578999998 4999999999999999999999999999998876432110 112222 245689988 8
Q ss_pred CCC--cEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCccCCCCCCCC
Q 004824 105 GKG--VIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKVRMNSPRDG 182 (728)
Q Consensus 105 G~G--v~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~d~ 182 (728)
|+| |+|||||||||++||+|.++ ++..++|..+... .......|.
T Consensus 101 G~g~~v~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~~~------~~~~~~~d~ 147 (395)
T 2z2z_A 101 GSVSVIQVAVLDTGVDYDHPDLAAN---------------------------IAWCVSTLRGKVS------TKLRDCADQ 147 (395)
T ss_dssp SCCTTCEEEEEESCBCTTCTTTGGG---------------------------EEEEEECGGGCCB------CCHHHHBCS
T ss_pred CCCCcEEEEEEcCCCCCCChhHhhc---------------------------cccCccccCCccc------CCCCCCCCC
Confidence 999 99999999999999999753 3444444432100 000124678
Q ss_pred CCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHC---------------
Q 004824 183 SGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQD--------------- 246 (728)
Q Consensus 183 ~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~--------------- 246 (728)
.||||||||||+|.. + ..| +.||||+|+|+.+|+++..| +..+++++||+||+++
T Consensus 148 ~gHGT~vAgiia~~~-n---~~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~ 218 (395)
T 2z2z_A 148 NGHGTHVIGTIAALN-N---DIG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAG 218 (395)
T ss_dssp SSHHHHHHHHHHCCC-S---SSS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTT
T ss_pred CCCHHHHHHHHHeec-C---CCc-----eEEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCccccccccccccccc
Confidence 999999999999973 1 123 28999999999999998876 7788999999999998
Q ss_pred -----CCcEEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEeccccccceeeeEEE
Q 004824 247 -----GVDVLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLT 321 (728)
Q Consensus 247 -----g~dVIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~ap~vitVgast~~~~~~~~~~ 321 (728)
+++|||||||.. . ....+..++..+.++|++||+||||+|.....++...|++|+|||++
T Consensus 219 ~~~~~~~~Vin~S~G~~--~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~---------- 283 (395)
T 2z2z_A 219 DPDDDAAEVISMSLGGP--A---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAID---------- 283 (395)
T ss_dssp CTTSCCCSEEEECEEBS--C---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEEC----------
T ss_pred cccCCCCeEEEecCCCC--C---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEec----------
Confidence 999999999993 2 23556677778899999999999999988778888899999999843
Q ss_pred cCCCcEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCcccccc
Q 004824 322 LGNGVQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYI 401 (728)
Q Consensus 322 ~~~g~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~ 401 (728)
T Consensus 284 -------------------------------------------------------------------------------- 283 (395)
T 2z2z_A 284 -------------------------------------------------------------------------------- 283 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCC
Q 004824 402 RSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPI 481 (728)
Q Consensus 402 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~ 481 (728)
..+.+++||++|| +|+|||++|+++++.
T Consensus 284 -----------------------------------------~~~~~a~fS~~G~----------~v~APG~~i~s~~~~- 311 (395)
T 2z2z_A 284 -----------------------------------------SNDNIASFSNRQP----------EVSAPGVDILSTYPD- 311 (395)
T ss_dssp -----------------------------------------TTSCBCTTSCSSC----------SEEEECSSEEEEETT-
T ss_pred -----------------------------------------CCCCCCcccCCCC----------CEEeCCCCeeeecCC-
Confidence 1236799999997 679999999999885
Q ss_pred CCccccccCcccCCceeeccccchhHHHHHHHHHHhhhCC-------------CCCHHHHHHHHHhccccCCCCCCcccc
Q 004824 482 SSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHP-------------DWSPAAIRSALVTTASPLDNTLSHIKD 548 (728)
Q Consensus 482 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p-------------~lsp~~ik~~L~~TA~~~~~~g~~~~d 548 (728)
+.|..++|||||||||||++|||+|++| .|++.+||++|++||+++...+
T Consensus 312 ------------~~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g----- 374 (395)
T 2z2z_A 312 ------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG----- 374 (395)
T ss_dssp ------------TEEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS-----
T ss_pred ------------CceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCC-----
Confidence 5799999999999999999999999999 9999999999999999875322
Q ss_pred CCCCCCCCCCCccCCCccCccccCCC
Q 004824 549 ASNNNFPASPLDMGAGHINPNKALDP 574 (728)
Q Consensus 549 ~~~~~~~~~~~~~G~G~in~~~Al~~ 574 (728)
.+..||+|+||+.+|++.
T Consensus 375 --------~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 375 --------WDADYGYGVVRAALAVQA 392 (395)
T ss_dssp --------SBTTTBTCBCCHHHHHHH
T ss_pred --------CCCCccCceeCHHHHHHH
Confidence 345899999999999863
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=6.4e-55 Score=492.15 Aligned_cols=336 Identities=23% Similarity=0.274 Sum_probs=265.2
Q ss_pred CcccEEEEecceeeEEEEEeCHHHHHHHhc-CCCeEEEecCCcccccCCCC-------------ccccCCCCCCCCCCCC
Q 004824 37 ISSKLVYTYANSIHGFSATLTVSELETLKK-LPGYISSTPDRPLAVHTTHT-------------SEFLGLSSLSGAWPAS 102 (728)
Q Consensus 37 ~~~~i~~~y~~~~ngfs~~l~~~~~~~L~~-~p~V~~V~~~~~~~~~~~~s-------------~~~~g~~~~~~~~~~~ 102 (728)
.+.+++++|. .|++|+++++++++++|++ +|+|++|+++..++++.... |.+..+.....+|..+
T Consensus 64 ~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~ 142 (471)
T 3t41_A 64 KSLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDL 142 (471)
T ss_dssp HTCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGC
T ss_pred CCCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhcc
Confidence 3678899996 5999999999999999999 99999999999887754322 2222222233589999
Q ss_pred CCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCccCCCCCCCC
Q 004824 103 NYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKVRMNSPRDG 182 (728)
Q Consensus 103 ~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~d~ 182 (728)
.+|+||+|||||||||++||+|.++- |.+. ..++....|... ......+...+.|.
T Consensus 143 ~~G~gv~VaViDtGid~~Hp~~~~~~-------~~~~-------------~~~~~~~~~~~~----~~~~~~~~~~~~d~ 198 (471)
T 3t41_A 143 PKHANTKIAIIDTGVMKNHDDLKNNF-------STDS-------------KNLVPLNGFRGT----EPEETGDVHDVNDR 198 (471)
T ss_dssp CSSCCCCEEEEESCCCTTCTTTTTTB-------CTTC-------------EECCCTTCGGGC----CTTCCCCTTCCCCS
T ss_pred CCCCCcEEEEEeCCCCCCChhHhcCc-------ccCC-------------cccccCCCccCC----CcccCCCCCCCcCC
Confidence 99999999999999999999998641 1110 011111111111 11111222356789
Q ss_pred CCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCCCChHHHHHHHHHHHHCCCcEEEeccccCCCCC
Q 004824 183 SGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGVYSSDVVAAIDQALQDGVDVLSLSLGLSLNGI 262 (728)
Q Consensus 183 ~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~ 262 (728)
.||||||||||+|+.. +.||||+|+|+.+|+++..++...++++||+||+++|++|||||||.. ...
T Consensus 199 ~gHGT~vAgiiaa~g~------------~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~-~~~ 265 (471)
T 3t41_A 199 KGHGTMVSGQTSANGK------------LIGVAPNNKFTMYRVFGSKKTELLWVSKAIVQAANDGNQVINISVGSY-IIL 265 (471)
T ss_dssp SSHHHHHHHHHHCBSS------------SBCSSTTSCEEEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEE-EEE
T ss_pred CCccchhhheeecCCc------------eeEECCCCeEEEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCC-CCC
Confidence 9999999999998632 389999999999999988778999999999999999999999999973 100
Q ss_pred ------------CChhhHHHHHHHHHHhCCcEEEEecCCCCCCCC------------------ccccCCCceEEeccccc
Q 004824 263 ------------FLEDDAIAVATFAAMEKGVLVVASAGNDGPSYW------------------TLINGAPWLLTVGAGTI 312 (728)
Q Consensus 263 ------------~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~------------------~~~~~ap~vitVgast~ 312 (728)
....+.+..++..+.++|++||+||||+|.... ..+..+|++|+|||++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~- 344 (471)
T 3t41_A 266 DKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTD- 344 (471)
T ss_dssp CTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEEC-
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeC-
Confidence 123467788888999999999999999997653 2567789999999843
Q ss_pred cceeeeEEEcCCCcEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEec
Q 004824 313 DREFEGSLTLGNGVQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFIS 392 (728)
Q Consensus 313 ~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n 392 (728)
T Consensus 345 -------------------------------------------------------------------------------- 344 (471)
T 3t41_A 345 -------------------------------------------------------------------------------- 344 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccccCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCC
Q 004824 393 NSALLEVYIRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGS 472 (728)
Q Consensus 393 ~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~ 472 (728)
..+.+++||++||+. |||+|||+
T Consensus 345 --------------------------------------------------~~~~~a~fS~~G~~~-------~di~APG~ 367 (471)
T 3t41_A 345 --------------------------------------------------QKSNLSEFSNFGMNY-------TDIAAPGG 367 (471)
T ss_dssp --------------------------------------------------TTSSBCTTCCBCTTT-------CCEEEECC
T ss_pred --------------------------------------------------CCCCCCCccCCCCCC-------CeEEecCC
Confidence 123679999999964 69999998
Q ss_pred c----------------------eeeccCCCCCccccccCcccCCceeeccccchhHHHHHHHHHHhhhCC-CCCHHHHH
Q 004824 473 L----------------------VLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHP-DWSPAAIR 529 (728)
Q Consensus 473 ~----------------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p-~lsp~~ik 529 (728)
+ |+++++. +.|..++|||||||||||++|||+|++| .|+|++||
T Consensus 368 ~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~-------------~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~ 434 (471)
T 3t41_A 368 SFAYLNQFGVDKWMNEGYMHKENILTTANN-------------GRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAI 434 (471)
T ss_dssp CCHHHHHHHHHHHHHTTTHHHHSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred CcccccccccccccccccccCceeEecCCC-------------CCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHH
Confidence 7 7888775 6899999999999999999999999999 89999999
Q ss_pred HHHHhccccCCCCCCccccCCCCCCCCCCCccCCCccCccccCCCC
Q 004824 530 SALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPNKALDPG 575 (728)
Q Consensus 530 ~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~G~G~in~~~Al~~~ 575 (728)
++|++||.+... .++..||||+||+.+|++..
T Consensus 435 ~~L~~tA~~~~~--------------~~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 435 ELLYQHGTSKNN--------------KPFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp HHHHHHSBCCSC--------------CCHHHHTTCBBCHHHHTTTT
T ss_pred HHHHHhCCCCCC--------------CCcCccccChhCHHHHHHHH
Confidence 999999987642 24458999999999999854
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=1.3e-53 Score=476.63 Aligned_cols=365 Identities=24% Similarity=0.337 Sum_probs=267.6
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCcc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKV 174 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 174 (728)
++.+|..+ |+||+|||||||||++||+|.++ ++..+++... .
T Consensus 13 ~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~---------------------------~~~~~~~~~~---------~ 54 (441)
T 1y9z_A 13 ATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN---------------------------NVTGTNNSGT---------G 54 (441)
T ss_dssp CSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS---------------------------EEEECCCTTS---------C
T ss_pred hhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC---------------------------cccCcccCCC---------C
Confidence 46688865 77999999999999999999753 1111111110 0
Q ss_pred CCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCC--eEEEEEeeeCCC-CChHHHHHHHHHHHHC-CCcE
Q 004824 175 RMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRA--CVAMYKAIWRHG-VYSSDVVAAIDQALQD-GVDV 250 (728)
Q Consensus 175 ~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A--~i~~~kv~~~~g-~~~~~i~~ai~~a~~~-g~dV 250 (728)
+...+.|..||||||||||+|.... .| +.||||+| +|+.+|+++..+ ++.+++++||+||+++ |++|
T Consensus 55 ~~~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~V 125 (441)
T 1y9z_A 55 NWYQPGNNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANV 125 (441)
T ss_dssp CTTCCCSSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSE
T ss_pred CCCCCCCCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcE
Confidence 1124567899999999999997521 23 38999995 999999999877 7888999999999999 9999
Q ss_pred EEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEeccccccceee-------------
Q 004824 251 LSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFE------------- 317 (728)
Q Consensus 251 IN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~ap~vitVgast~~~~~~------------- 317 (728)
||||||.. . ....+..++.++.++|++||+||||+|.....++...|++|+|||++.+....
T Consensus 126 in~S~G~~--~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~A 200 (441)
T 1y9z_A 126 VTMSLGGS--G---STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISG 200 (441)
T ss_dssp EEECCCBS--C---CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEE
T ss_pred EEeCCCCC--C---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEe
Confidence 99999983 2 22455667778999999999999999988778888899999999987764321
Q ss_pred ------eEEEcCCCc----EEeeeecCCCCCCC--Ceee--EEE------------ccCCCCC--ccCcc-CcceEEEEc
Q 004824 318 ------GSLTLGNGV----QINFKSLYPGNSSP--SQVS--LAF------------MDACDSV--TELKK-VINSIVVCR 368 (728)
Q Consensus 318 ------~~~~~~~g~----~~~g~s~~~~~~~~--~~~~--lv~------------~~~c~~~--~~~~~-~~gkiv~~~ 368 (728)
.....++++ .+.|.+++...... ..++ +.+ ...|... .++.. ++|||++|+
T Consensus 201 pG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~ 280 (441)
T 1y9z_A 201 PGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVE 280 (441)
T ss_dssp ECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEE
T ss_pred ccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCccccEEEEe
Confidence 111122222 23333333211000 0000 000 1347543 45555 999999999
Q ss_pred -cCC-----chhHHHHHHHHcCceEEEEecCCCccc----c--c-ccc-CccEEEeecccHHHHHHHHHhCCCCeEEEEe
Q 004824 369 -EDS-----SISSQIDNAVAAGVLGAVFISNSALLE----V--Y-IRS-SFPAAFINVNDGQTIIDYIKKCDNPTGSLQF 434 (728)
Q Consensus 369 -g~~-----~~~~~~~~~~~~Ga~g~i~~n~~~~~~----~--~-~~~-~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~ 434 (728)
+.+ .+.+|..+++++|+.|+|++|+..... . . ... .+|.+.++..+|+.|+.|+.++ ++
T Consensus 281 rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~t--- 353 (441)
T 1y9z_A 281 RVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----TT--- 353 (441)
T ss_dssp CCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----EE---
T ss_pred ccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----cc---
Confidence 765 678999999999999999999865311 1 1 112 3499999999999999876321 00
Q ss_pred eeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccccCcccCCceeeccccchhHHHHHHHH
Q 004824 435 RKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAG 514 (728)
Q Consensus 435 ~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aA 514 (728)
+ +... .+.|..++|||||||||||++|
T Consensus 354 --------------------------------~--------~~~~-------------~~~y~~~sGTSmAaP~VAG~aA 380 (441)
T 1y9z_A 354 --------------------------------V--------SNQG-------------NQDYEYYNGTSMATPHVSGVAT 380 (441)
T ss_dssp --------------------------------E--------EEEE-------------EESEEEECSHHHHHHHHHHHHH
T ss_pred --------------------------------c--------cccc-------------CCCceeecccccCCcccchHHH
Confidence 0 0111 2689999999999999999999
Q ss_pred HHhhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCccCCCccCccccCCCCceecCChhhHHHHHHhcCC
Q 004824 515 LLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPNKALDPGLVYDATAEDYIKLLCAMNY 594 (728)
Q Consensus 515 Ll~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~G~G~in~~~Al~~~lv~~~~~~dy~~~lc~~~~ 594 (728)
||+|+||+|+|++||++||+||+++...+ .+.+||+|+||+.+|+ ||+.|||..++
T Consensus 381 Ll~~~~p~~sp~~ik~~L~~TA~~~~~~g-------------~~~~~G~G~vn~~~A~-----------~~~~~lc~~~~ 436 (441)
T 1y9z_A 381 LVWSYHPECSASQVRAALNATADDLSVAG-------------RDNQTGYGMINAVAAK-----------AYLDESCTGPT 436 (441)
T ss_dssp HHHHHCTTSCHHHHHHHHHHHSBCCSSSS-------------CBTTTBTCBCCHHHHH-----------HHHHHCTTCC-
T ss_pred HHHHHCCCCCHHHHHHHHHhhchhhccCC-------------CcccccccccCHHHHH-----------HHHHhhhcCCC
Confidence 99999999999999999999999886533 2458999999999996 59999999875
Q ss_pred C
Q 004824 595 K 595 (728)
Q Consensus 595 ~ 595 (728)
.
T Consensus 437 ~ 437 (441)
T 1y9z_A 437 D 437 (441)
T ss_dssp -
T ss_pred C
Confidence 3
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=3.8e-52 Score=478.60 Aligned_cols=347 Identities=26% Similarity=0.289 Sum_probs=256.2
Q ss_pred cccEEEEecceeeEEEEEeCH---H-HHHHHhc--CCCeEEEecCCcccccC----CC----------------------
Q 004824 38 SSKLVYTYANSIHGFSATLTV---S-ELETLKK--LPGYISSTPDRPLAVHT----TH---------------------- 85 (728)
Q Consensus 38 ~~~i~~~y~~~~ngfs~~l~~---~-~~~~L~~--~p~V~~V~~~~~~~~~~----~~---------------------- 85 (728)
+.++.+++. .+++++++++. + .+++|++ +|+|++|+|+..+++.. ..
T Consensus 52 g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (671)
T 1r6v_A 52 NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEE 130 (671)
T ss_dssp TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSST
T ss_pred CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCccccccccccccccccccccccc
Confidence 356788887 68999999864 3 3567764 89999999997665431 00
Q ss_pred -CccccCCC--CCCCC-CCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeec
Q 004824 86 -TSEFLGLS--SLSGA-WPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFF 161 (728)
Q Consensus 86 -s~~~~g~~--~~~~~-~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~ 161 (728)
....|++. ++..+ |.. ++|+||+|||||||||++||+|.++ ++..+.+
T Consensus 131 ~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~~~---------------------------~~~g~~~ 182 (671)
T 1r6v_A 131 LSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHPDLEGQ---------------------------VIAGYRP 182 (671)
T ss_dssp TGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTSGGGTTT---------------------------BCCEEEG
T ss_pred ccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCCcccccc---------------------------EEecccc
Confidence 00112221 22345 877 8899999999999999999999864 1111111
Q ss_pred cccccccCCCCccCCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeC------CC-CChH
Q 004824 162 NKGLIANNPKLKVRMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWR------HG-VYSS 234 (728)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~------~g-~~~~ 234 (728)
..+... ....+..|..||||||||||||..+ + .|+ .||||+|+|+.+|+++. .+ ....
T Consensus 183 ~~~~~~------p~~~d~~d~~gHGThVAGiIAa~~n-g---~gv-----~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~ 247 (671)
T 1r6v_A 183 AFDEEL------PAGTDSSYGGSAGTHVAGTIAAKKD-G---KGI-----VGVAPGAKIMPIVIFDDPALVGGNGYVGDD 247 (671)
T ss_dssp GGTEEE------CTTCBCCTTCSHHHHHHHHHHCCCS-S---SSC-----CCSCTTSEEEEEESBCCHHHHCTTSBCCHH
T ss_pred cCCCcC------CCCCCCccCCCcchhhhhhhhccCC-C---Cce-----EEECCCCEEEEEEeccCccccCCCCccCHH
Confidence 111000 0011234678999999999999742 1 233 89999999999999986 22 3456
Q ss_pred HHHHHHHHHHHCCCcEEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCC-CccccCCCceEEecccccc
Q 004824 235 DVVAAIDQALQDGVDVLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSY-WTLINGAPWLLTVGAGTID 313 (728)
Q Consensus 235 ~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~ap~vitVgast~~ 313 (728)
.+++||+||+++|++|||||||.. . +...+..++..|.++|++||+||||+|... ..++...|++|+|||++.+
T Consensus 248 ~i~~ai~~A~~~gadVIN~SlG~~--~---~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~ 322 (671)
T 1r6v_A 248 YVAAGIIWATDHGAKVMNHSWGGW--G---YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYY 322 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEECEEBS--C---CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCC--C---CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCC
Confidence 789999999999999999999983 2 345677788889999999999999999865 5677788999999995321
Q ss_pred ceeeeEEEcCCCcEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecC
Q 004824 314 REFEGSLTLGNGVQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISN 393 (728)
Q Consensus 314 ~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~ 393 (728)
..
T Consensus 323 g~------------------------------------------------------------------------------ 324 (671)
T 1r6v_A 323 GG------------------------------------------------------------------------------ 324 (671)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 10
Q ss_pred CCccccccccCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCc
Q 004824 394 SALLEVYIRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSL 473 (728)
Q Consensus 394 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~ 473 (728)
...+++||++||.. ||+|||++
T Consensus 325 --------------------------------------------------~~~~a~fSn~G~~v--------dv~APG~~ 346 (671)
T 1r6v_A 325 --------------------------------------------------TFRVAGFSSRSDGV--------SVGAPGVT 346 (671)
T ss_dssp --------------------------------------------------EEEECSSSCCCTTE--------EEEEECSS
T ss_pred --------------------------------------------------ceeeccccCCCCCe--------eEEecCCC
Confidence 01478999999864 99999999
Q ss_pred eeeccCCCCCccc-----cccCcccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCcccc
Q 004824 474 VLASWSPISSVAE-----VQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKD 548 (728)
Q Consensus 474 I~sa~~~~~~~~~-----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~d 548 (728)
|+++++....... .......+.|..++|||||||||||++|||+|++|+|+|.+||++|++||+++...+
T Consensus 347 I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g----- 421 (671)
T 1r6v_A 347 ILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG----- 421 (671)
T ss_dssp EEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS-----
T ss_pred EEeecCCCCccccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC-----
Confidence 9999875321110 001112357999999999999999999999999999999999999999999875432
Q ss_pred CCCCCCCCCCCccCCCccCccccCCCCceecCCh
Q 004824 549 ASNNNFPASPLDMGAGHINPNKALDPGLVYDATA 582 (728)
Q Consensus 549 ~~~~~~~~~~~~~G~G~in~~~Al~~~lv~~~~~ 582 (728)
.+..||+|+||+.+|++..|.++...
T Consensus 422 --------~d~~~G~G~vna~~Al~~~l~~~~~~ 447 (671)
T 1r6v_A 422 --------WDHDTGYGLVKLDAALQGPLPTQGGV 447 (671)
T ss_dssp --------CBTTTBTCBCCHHHHHHCCCCSSSEE
T ss_pred --------CCCCcccceeCHHHHhhhhcCCCCCc
Confidence 34589999999999999877655433
No 9
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=4.3e-54 Score=491.47 Aligned_cols=301 Identities=22% Similarity=0.257 Sum_probs=40.8
Q ss_pred ccEEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEecCCcccccCCCCccccCCCCC------CCCCCCCCCCCCcEEEE
Q 004824 39 SKLVYTYANSIHGFSATLTVSELETLKKLPGYISSTPDRPLAVHTTHTSEFLGLSSL------SGAWPASNYGKGVIIGL 112 (728)
Q Consensus 39 ~~i~~~y~~~~ngfs~~l~~~~~~~L~~~p~V~~V~~~~~~~~~~~~s~~~~g~~~~------~~~~~~~~~G~Gv~VgV 112 (728)
.+++++|+++|+||+++++++++++|+++|+|++|+++..++.+ ... |++.++ ...|..+.+|+||+|||
T Consensus 109 ~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~-~~p---WgL~~i~~~~~~~~~w~~~~~G~GV~VaV 184 (692)
T 2p4e_P 109 TKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ-SIP---WNLERITPPRYRADEYQPPDGGSLVEVYL 184 (692)
T ss_dssp CEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC------------------------------------
T ss_pred cceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC-CCC---cchhhcccccccccccccCCCCCCcEEEE
Confidence 68999999999999999999999999999999999999977542 222 333321 23688889999999999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCccCCCCCCCCCCChhhHHHH
Q 004824 113 VDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKVRMNSPRDGSGHGTHTSSI 192 (728)
Q Consensus 113 IDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi 192 (728)
||||||++||+|.++-. |. +|+ +..+.+ + ......+.|..|||||||||
T Consensus 185 IDTGId~~HpdL~gr~~------~~-------~~~-------------~~~d~d---g--~~~~~~~~D~~GHGTHVAGi 233 (692)
T 2p4e_P 185 LDTSIQSDHREIEGRVM------VT-------DFE-------------NVPEED---G--TRFHRQASKCDSHGTHLAGV 233 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EcCCCCCCChhhcCceE------ec-------ccc-------------cccCCC---C--CcccCCCCCCCCcHHHhhhH
Confidence 99999999999986410 10 010 000000 0 00012466889999999999
Q ss_pred hccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHC------CCcEEEeccccCCCCCCCh
Q 004824 193 AAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQD------GVDVLSLSLGLSLNGIFLE 265 (728)
Q Consensus 193 iaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~------g~dVIN~SlG~~~~~~~~~ 265 (728)
|+|+. .||||+|+|+.+|+++..| ++.+++++||+|++++ |++|||||||+ ..
T Consensus 234 IAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg--~~---- 293 (692)
T 2p4e_P 234 VSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAG--GY---- 293 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhcCC--------------CccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCC--CC----
Confidence 99873 6999999999999998876 7888999999999986 89999999998 32
Q ss_pred hhHHHHHHHHHHhCCcEEEEecCCCCCCCC-ccccCCCceEEeccccccceeeeEEEcCCCcEEeeeecCCCCCCCCeee
Q 004824 266 DDAIAVATFAAMEKGVLVVASAGNDGPSYW-TLINGAPWLLTVGAGTIDREFEGSLTLGNGVQINFKSLYPGNSSPSQVS 344 (728)
Q Consensus 266 ~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~ 344 (728)
...+..++..+.++|++||+||||+|.... ..+...|++|+|||++.+...
T Consensus 294 s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~---------------------------- 345 (692)
T 2p4e_P 294 SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP---------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc----------------------------
Confidence 345666777888999999999999997653 346788999999996432110
Q ss_pred EEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEEeecccHHHHHHHHHh
Q 004824 345 LAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAFINVNDGQTIIDYIKK 424 (728)
Q Consensus 345 lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~ 424 (728)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccccCcccCCceeeccccc
Q 004824 425 CDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSM 504 (728)
Q Consensus 425 ~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSm 504 (728)
...-+.||+||| ||||+|||++|+++++.. .+.|..++||||
T Consensus 346 -------------------a~~ss~fSn~G~--------~vDI~APG~~I~St~~~~-----------~~~y~~~SGTSm 387 (692)
T 2p4e_P 346 -------------------VTLGTLGTNFGR--------CVDLFAPGEDIIGASSDC-----------STCFVSQSGTSQ 387 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------cccccccCCCCC--------ceeEEecCCcEEeeccCC-----------CCceEeccchHH
Confidence 000123899997 569999999999998752 257899999999
Q ss_pred hhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCC
Q 004824 505 ATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLD 540 (728)
Q Consensus 505 AaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~ 540 (728)
|||||||++|||++++|+|+|++||++|++||.+..
T Consensus 388 AAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~~ 423 (692)
T 2p4e_P 388 AAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDV 423 (692)
T ss_dssp ------------------------------------
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999998653
No 10
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.8e-53 Score=462.24 Aligned_cols=303 Identities=22% Similarity=0.229 Sum_probs=198.8
Q ss_pred CCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceee----eeeeccccccccCCC
Q 004824 96 SGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLI----GARFFNKGLIANNPK 171 (728)
Q Consensus 96 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kii----g~~~~~~~~~~~~~~ 171 (728)
..+|.++..|++|+|||||||||++||+|.+....+....|+..++........ .+..+. ..+.+.......
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--- 96 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYA-AFQSIRDQGLKGKEKEEALEAV--- 96 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHH-HHHHHHHHTCCSHHHHHHHHHH---
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCccccc-ccccccCccccccccccccccc---
Confidence 568999998999999999999999999999876666777787655432110000 000000 000000000000
Q ss_pred CccCCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC------CChHHHHHHHHHHHH
Q 004824 172 LKVRMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG------VYSSDVVAAIDQALQ 245 (728)
Q Consensus 172 ~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g------~~~~~i~~ai~~a~~ 245 (728)
..+...+.|.+||||||||||||+..+ | +.||||+|+|+.+|++.... ....++++||+||++
T Consensus 97 -~~~~~~~~D~~gHGThVAGiiag~~~~-----g-----~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~ 165 (357)
T 4h6x_A 97 -IPDTKDRIVLNDHACHVTSTIVGQEHS-----P-----VFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALE 165 (357)
T ss_dssp -CTTTHHHHHHHHHHHHHHHHHHCCTTS-----S-----CCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHH
T ss_pred -cCCCCCCcCCCCcHHHHHHHHhccCCC-----C-----ceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHH
Confidence 001123446779999999999997422 2 38999999999999975421 345678899999999
Q ss_pred CCCcEEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEeccccccceeeeEEEcCCC
Q 004824 246 DGVDVLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLGNG 325 (728)
Q Consensus 246 ~g~dVIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~ap~vitVgast~~~~~~~~~~~~~g 325 (728)
.|++|||||||.. .......+.+..++..+.++|++||+||||+|.....++...|++|+|||++
T Consensus 166 ~g~~Vin~S~G~~-~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~-------------- 230 (357)
T 4h6x_A 166 LGANIIHCAFCRP-TQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAK-------------- 230 (357)
T ss_dssp TTCSEEEEC------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEEC--------------
T ss_pred cCCCEEeeccccC-CccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEec--------------
Confidence 9999999999984 3334455677888889999999999999999988888888899999999843
Q ss_pred cEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCc
Q 004824 326 VQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSF 405 (728)
Q Consensus 326 ~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~ 405 (728)
T Consensus 231 -------------------------------------------------------------------------------- 230 (357)
T 4h6x_A 231 -------------------------------------------------------------------------------- 230 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCcc
Q 004824 406 PAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVA 485 (728)
Q Consensus 406 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~ 485 (728)
..+.+++||+||+.. .||||+|||++|+++++..
T Consensus 231 -------------------------------------~~~~~~~fSn~G~~~-----~~~di~APG~~i~s~~~~~---- 264 (357)
T 4h6x_A 231 -------------------------------------VDGTPCHFSNWGGNN-----TKEGILAPGEEILGAQPCT---- 264 (357)
T ss_dssp -------------------------------------TTSSBCTTCC---CT-----TTTEEEEECSSEEECCTTC----
T ss_pred -------------------------------------cCCcccccccCCCCC-----CccceeecCCCeEeccCCC----
Confidence 234679999999865 6899999999999998863
Q ss_pred ccccCcccCCceeeccccchhHHHHHHHHHHhhh----CCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCcc
Q 004824 486 EVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAA----HPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDM 561 (728)
Q Consensus 486 ~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~ 561 (728)
+.|..++|||||||||||++|||+++ +|.|+++|||++|++||+++... ....+.+|
T Consensus 265 --------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~-----------~~~~~~~~ 325 (357)
T 4h6x_A 265 --------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE-----------VVEEPERC 325 (357)
T ss_dssp --------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-------------------------C
T ss_pred --------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC-----------CCCCcccc
Confidence 56788999999999999999999954 66899999999999999987532 22345689
Q ss_pred CCCccCccccCC
Q 004824 562 GAGHINPNKALD 573 (728)
Q Consensus 562 G~G~in~~~Al~ 573 (728)
|+|+||+.+|++
T Consensus 326 G~G~vn~~~A~~ 337 (357)
T 4h6x_A 326 LRGFVNIPGAMK 337 (357)
T ss_dssp TTCBCCHHHHHH
T ss_pred eeEEecHHHHHH
Confidence 999999999986
No 11
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=1.3e-50 Score=425.31 Aligned_cols=259 Identities=32% Similarity=0.430 Sum_probs=211.2
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCcc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKV 174 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 174 (728)
...+|+.+..|+||+|||||||||++||+|.++ ++..++|.++.
T Consensus 20 ~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~---------------------------~~~~~~~~~~~--------- 63 (280)
T 1dbi_A 20 TDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK---------------------------VIKGYDFVDND--------- 63 (280)
T ss_dssp HHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT---------------------------EEEEEETTTTB---------
T ss_pred cHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC---------------------------cccceeccCCC---------
Confidence 356999988888999999999999999999753 44455554321
Q ss_pred CCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHCCCcEEEe
Q 004824 175 RMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQDGVDVLSL 253 (728)
Q Consensus 175 ~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~ 253 (728)
..+.|..+|||||||||+|...+.. | +.||||+|+|+.+|+++..+ +..+++++||+||+++|++||||
T Consensus 64 --~~~~d~~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~~Vin~ 133 (280)
T 1dbi_A 64 --YDPMDLNNHGTHVAGIAAAETNNAT---G-----IAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINL 133 (280)
T ss_dssp --SCCCCSSSHHHHHHHHHHCCCSSSS---S-----CCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred --CCCCCCCCcHHHHHHHHhCcCCCCC---c-----ceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEe
Confidence 2456889999999999999864332 2 27999999999999998776 78889999999999999999999
Q ss_pred ccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEeccccccceeeeEEEcCCCcEEeeeec
Q 004824 254 SLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLGNGVQINFKSL 333 (728)
Q Consensus 254 SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~g~s~ 333 (728)
|||.. . ....+..++..+.++|++||+||||+|......+...+++|+|||++
T Consensus 134 S~G~~--~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~---------------------- 186 (280)
T 1dbi_A 134 SLGCD--C---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVD---------------------- 186 (280)
T ss_dssp CCSSC--C---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEEC----------------------
T ss_pred CCCCC--C---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeC----------------------
Confidence 99983 2 24567777888999999999999999987777788899999999843
Q ss_pred CCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEEeecc
Q 004824 334 YPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAFINVN 413 (728)
Q Consensus 334 ~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~i~~~ 413 (728)
T Consensus 187 -------------------------------------------------------------------------------- 186 (280)
T 1dbi_A 187 -------------------------------------------------------------------------------- 186 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccccCccc
Q 004824 414 DGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLY 493 (728)
Q Consensus 414 ~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~ 493 (728)
..+.+++||++||. |||+|||++|+++++.
T Consensus 187 -----------------------------~~~~~~~~S~~G~~--------~dv~ApG~~i~s~~~~------------- 216 (280)
T 1dbi_A 187 -----------------------------QYDRLASFSNYGTW--------VDVVAPGVDIVSTITG------------- 216 (280)
T ss_dssp -----------------------------TTSCBCTTBCCSTT--------CCEEEECSSEEEEETT-------------
T ss_pred -----------------------------CCCCcCCCCCCCCC--------ceEEEecCCeEeecCC-------------
Confidence 12367899999974 5999999999999875
Q ss_pred CCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCccCCCccCccccCC
Q 004824 494 SNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPNKALD 573 (728)
Q Consensus 494 ~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~G~G~in~~~Al~ 573 (728)
+.|..++|||||||||||++|||++ |.+++.+||++|++||+++... ...||+|+||+.+|++
T Consensus 217 ~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~---------------~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 217 NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT---------------GTYFKYGRINSYNAVT 279 (280)
T ss_dssp TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB---------------TTTBSSEECCHHHHHT
T ss_pred CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC---------------CCcccCCEECHHHHhc
Confidence 5799999999999999999999987 8999999999999999987531 2379999999999986
No 12
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.9e-50 Score=421.20 Aligned_cols=256 Identities=34% Similarity=0.473 Sum_probs=216.2
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCcc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKV 174 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 174 (728)
.+.+|..+++|+||+|+|||||| .+||+|. +...++|..+.
T Consensus 13 ~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-----------------------------~~~~~~~~~~~--------- 53 (269)
T 1gci_A 13 APAAHNRGLTGSGVKVAVLDTGI-STHPDLN-----------------------------IRGGASFVPGE--------- 53 (269)
T ss_dssp HHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-----------------------------EEEEEECSTTC---------
T ss_pred cHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-----------------------------ccCCcccCCCC---------
Confidence 35689999999999999999999 8999984 22334443321
Q ss_pred CCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHCCCcEEEe
Q 004824 175 RMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQDGVDVLSL 253 (728)
Q Consensus 175 ~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~ 253 (728)
..+.|..||||||||||+|... ..| +.||||+|+|+.+|+++..+ +..+++++||+||++++++||||
T Consensus 54 --~~~~d~~gHGT~vAgiia~~~~----~~~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~ 122 (269)
T 1gci_A 54 --PSTQDGNGHGTHVAGTIAALNN----SIG-----VLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANL 122 (269)
T ss_dssp --CSCSCSSSHHHHHHHHHHCCCS----SSB-----CCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEE
T ss_pred --CCCCCCCCChHHHHHHHhcCcC----CCC-----cEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEe
Confidence 2356789999999999999731 122 38999999999999998766 67889999999999999999999
Q ss_pred ccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEeccccccceeeeEEEcCCCcEEeeeec
Q 004824 254 SLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLGNGVQINFKSL 333 (728)
Q Consensus 254 SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~g~s~ 333 (728)
|||.. . ....+..++..+.++|++||+||||+|.....++...+++|+||+++
T Consensus 123 S~G~~--~---~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~---------------------- 175 (269)
T 1gci_A 123 SLGSP--S---PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATD---------------------- 175 (269)
T ss_dssp CCCBS--S---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEEC----------------------
T ss_pred CCCCC--C---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeec----------------------
Confidence 99993 2 23567777888899999999999999988778888899999999842
Q ss_pred CCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEEeecc
Q 004824 334 YPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAFINVN 413 (728)
Q Consensus 334 ~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~i~~~ 413 (728)
T Consensus 176 -------------------------------------------------------------------------------- 175 (269)
T 1gci_A 176 -------------------------------------------------------------------------------- 175 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccccCccc
Q 004824 414 DGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLY 493 (728)
Q Consensus 414 ~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~ 493 (728)
..+.+++||++||. |||+|||++|+++++.
T Consensus 176 -----------------------------~~~~~~~~S~~G~~--------~di~APG~~i~s~~~~------------- 205 (269)
T 1gci_A 176 -----------------------------QNNNRASFSQYGAG--------LDIVAPGVNVQSTYPG------------- 205 (269)
T ss_dssp -----------------------------TTSCBCTTCCCSTT--------EEEEEECSSEEEEETT-------------
T ss_pred -----------------------------CCCCCCCCCCCCCC--------cceEecCCCeEeecCC-------------
Confidence 12367899999985 4999999999999875
Q ss_pred CCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCccCCCccCccccCC
Q 004824 494 SNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPNKALD 573 (728)
Q Consensus 494 ~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~G~G~in~~~Al~ 573 (728)
+.|..++|||||||||||++|||+|++|+|++.+||++|++||+++. .+..||+|+||+.+|++
T Consensus 206 ~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g----------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 206 STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG----------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS----------------CHHHHTTCBCCHHHHTC
T ss_pred CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC----------------CCCCcccCccCHHHHcC
Confidence 57999999999999999999999999999999999999999999773 23489999999999985
No 13
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.3e-50 Score=423.92 Aligned_cols=257 Identities=32% Similarity=0.462 Sum_probs=215.0
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCcc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKV 174 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 174 (728)
...+|..+++|+||+|+|||||||++||+|. +...++|..+.
T Consensus 13 ~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~~--------- 54 (274)
T 1r0r_E 13 ADKVQAQGFKGANVKVAVLDTGIQASHPDLN-----------------------------VVGGASFVAGE--------- 54 (274)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECSTTC---------
T ss_pred CHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-----------------------------CCCCccccCCC---------
Confidence 3568999999999999999999999999994 22333443321
Q ss_pred CCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHCCCcEEEe
Q 004824 175 RMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQDGVDVLSL 253 (728)
Q Consensus 175 ~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~ 253 (728)
....|..+|||||||||+|... ..| +.||||+|+|+.+|+++..+ +..+++++||+||++++++||||
T Consensus 55 --~~~~d~~gHGT~vAgiia~~~~----~~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~ 123 (274)
T 1r0r_E 55 --AYNTDGNGHGTHVAGTVAALDN----TTG-----VLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINM 123 (274)
T ss_dssp --CTTCCSSSHHHHHHHHHHCCSS----SSB-----CCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEE
T ss_pred --CCCCCCCCCHHHHHHHHHccCC----CCc-----eEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEe
Confidence 1246788999999999999731 122 38999999999999998776 67889999999999999999999
Q ss_pred ccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCC----CccccCCCceEEeccccccceeeeEEEcCCCcEEe
Q 004824 254 SLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSY----WTLINGAPWLLTVGAGTIDREFEGSLTLGNGVQIN 329 (728)
Q Consensus 254 SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~ 329 (728)
|||.. . ....+..++.++.++|++||+||||+|... ..++...|++|+||+.+
T Consensus 124 S~G~~--~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~------------------ 180 (274)
T 1r0r_E 124 SLGGA--S---GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD------------------ 180 (274)
T ss_dssp CEEBS--S---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEEC------------------
T ss_pred CCCCC--C---CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEec------------------
Confidence 99993 2 245677788889999999999999999763 34567788999999842
Q ss_pred eeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEE
Q 004824 330 FKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAF 409 (728)
Q Consensus 330 g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~ 409 (728)
T Consensus 181 -------------------------------------------------------------------------------- 180 (274)
T 1r0r_E 181 -------------------------------------------------------------------------------- 180 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCcccccc
Q 004824 410 INVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQS 489 (728)
Q Consensus 410 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~ 489 (728)
..+.++.||++|| ||||+|||.+|+++++.
T Consensus 181 ---------------------------------~~~~~~~~S~~G~--------~~di~APG~~i~s~~~~--------- 210 (274)
T 1r0r_E 181 ---------------------------------SNSNRASFSSVGA--------ELEVMAPGAGVYSTYPT--------- 210 (274)
T ss_dssp ---------------------------------TTSCBCTTCCCST--------TEEEEEECSSEEEEETT---------
T ss_pred ---------------------------------CCCCcCccCCCCC--------CceEEeCCCCeEeecCC---------
Confidence 1236789999997 46999999999999875
Q ss_pred CcccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCccCCCccCcc
Q 004824 490 GLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPN 569 (728)
Q Consensus 490 ~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~G~G~in~~ 569 (728)
+.|..++|||||||||||++|||+|++|+|++.+||++|++||+++. .+..||+|+||+.
T Consensus 211 ----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g----------------~~~~~G~G~~~~~ 270 (274)
T 1r0r_E 211 ----NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG----------------SSFYYGKGLINVE 270 (274)
T ss_dssp ----TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS----------------CHHHHTTCBCCHH
T ss_pred ----CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC----------------CCCCcccCccCHH
Confidence 57999999999999999999999999999999999999999999763 2348999999999
Q ss_pred ccCC
Q 004824 570 KALD 573 (728)
Q Consensus 570 ~Al~ 573 (728)
+|++
T Consensus 271 ~A~~ 274 (274)
T 1r0r_E 271 AAAQ 274 (274)
T ss_dssp HHTC
T ss_pred HHhC
Confidence 9985
No 14
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=6.3e-50 Score=419.96 Aligned_cols=258 Identities=34% Similarity=0.479 Sum_probs=217.6
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCcc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKV 174 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 174 (728)
+..+|+.. +|+||+|||||||||++||+|.++ ++..++|.++.
T Consensus 20 ~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~~--------- 62 (279)
T 1thm_A 20 APQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK---------------------------VVGGWDFVDND--------- 62 (279)
T ss_dssp HHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEETTTTB---------
T ss_pred hHHHHhcC-CCCCCEEEEEccCCCCCCcchhcC---------------------------ccccccccCCC---------
Confidence 35688887 699999999999999999999753 44555555431
Q ss_pred CCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHCCCcEEEe
Q 004824 175 RMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQDGVDVLSL 253 (728)
Q Consensus 175 ~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~ 253 (728)
..+.|..+|||||||||+|...++ .| +.|+||+|+|+.+|+++..+ ++.+++++||+||+++|++||||
T Consensus 63 --~~~~d~~gHGT~vAgiia~~~~n~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~ 132 (279)
T 1thm_A 63 --STPQNGNGHGTHCAGIAAAVTNNS---TG-----IAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISL 132 (279)
T ss_dssp --SCCCCSSSHHHHHHHHHHCCCSSS---SS-----CCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred --CCCCCCCCcHHHHHHHHhCccCCC---Cc-----cEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEE
Confidence 245678999999999999986433 22 28999999999999998766 67889999999999999999999
Q ss_pred ccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEeccccccceeeeEEEcCCCcEEeeeec
Q 004824 254 SLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLGNGVQINFKSL 333 (728)
Q Consensus 254 SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~g~s~ 333 (728)
|||.. . ....+..++..+.++|++||+||||+|.....++...+++|+||+++
T Consensus 133 S~G~~--~---~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~---------------------- 185 (279)
T 1thm_A 133 SLGGT--V---GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTD---------------------- 185 (279)
T ss_dssp CCCBS--S---CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEEC----------------------
T ss_pred ecCCC--C---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeC----------------------
Confidence 99993 2 24567778888999999999999999988777888899999999843
Q ss_pred CCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEEeecc
Q 004824 334 YPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAFINVN 413 (728)
Q Consensus 334 ~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~i~~~ 413 (728)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 1thm_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccccCccc
Q 004824 414 DGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLY 493 (728)
Q Consensus 414 ~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~ 493 (728)
..+.++.||++||. |||+|||++|+++++.
T Consensus 186 -----------------------------~~~~~~~fS~~G~~--------~dv~APG~~i~s~~~~------------- 215 (279)
T 1thm_A 186 -----------------------------QNDNKSSFSTYGSW--------VDVAAPGSSIYSTYPT------------- 215 (279)
T ss_dssp -----------------------------TTSCBCTTCCCCTT--------CCEEEECSSEEEEETT-------------
T ss_pred -----------------------------CCCCcCCcCCCCCc--------eEEEEcCCCeEEEeCC-------------
Confidence 12367899999974 5999999999999875
Q ss_pred CCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCccCCCccCccccCC
Q 004824 494 SNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPNKALD 573 (728)
Q Consensus 494 ~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~G~G~in~~~Al~ 573 (728)
+.|..++|||||||||||++||| ++|.+++.+||++|++||+++...+ ..||+|+||+.+|++
T Consensus 216 ~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~---------------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 216 STYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG---------------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp TEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT---------------TTBSSEECCHHHHHH
T ss_pred CCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC---------------ccccCCeeCHHHHhc
Confidence 57999999999999999999999 5799999999999999999875422 378999999999975
No 15
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=3.5e-50 Score=422.17 Aligned_cols=259 Identities=31% Similarity=0.445 Sum_probs=215.4
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCcc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKV 174 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 174 (728)
...+|..+++|+||+|||||||||++||+|.. ...++|..+.
T Consensus 13 ~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~~--------- 54 (281)
T 1to2_E 13 APALHSQGYTGSNVKVAVIDSGIDSSHPDLKV-----------------------------AGGASMVPSE--------- 54 (281)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECCTTC---------
T ss_pred hHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC-----------------------------cCCccccCCC---------
Confidence 35689999999999999999999999999941 2223333210
Q ss_pred CCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHCCCcEEEe
Q 004824 175 RMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQDGVDVLSL 253 (728)
Q Consensus 175 ~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~ 253 (728)
.....|..+|||||||||+|... ..| +.||||+|+|+.+|++...+ +..++++++|+|+++++++||||
T Consensus 55 -~~~~~d~~gHGT~vAgiia~~~~----~~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~ 124 (281)
T 1to2_E 55 -TNPFQDNNSHGTHVAGTVAALNN----SIG-----VLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINM 124 (281)
T ss_dssp -CCTTCCSSSHHHHHHHHHHCCSS----SSS-----BCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEE
T ss_pred -CCCCCCCCCcHHHHHHHHhccCC----CCc-----ceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEE
Confidence 11236788999999999999731 122 38999999999999998766 67889999999999999999999
Q ss_pred ccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCC----CccccCCCceEEeccccccceeeeEEEcCCCcEEe
Q 004824 254 SLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSY----WTLINGAPWLLTVGAGTIDREFEGSLTLGNGVQIN 329 (728)
Q Consensus 254 SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~ 329 (728)
|||.. . ....+..++..+.++|++||+||||+|... ..++...|++|+|||.+
T Consensus 125 S~G~~--~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~------------------ 181 (281)
T 1to2_E 125 SLGGP--S---GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVD------------------ 181 (281)
T ss_dssp CEEBS--C---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEEC------------------
T ss_pred CCcCC--C---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEec------------------
Confidence 99993 2 245677788888999999999999999763 34567789999999842
Q ss_pred eeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEE
Q 004824 330 FKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAF 409 (728)
Q Consensus 330 g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~ 409 (728)
T Consensus 182 -------------------------------------------------------------------------------- 181 (281)
T 1to2_E 182 -------------------------------------------------------------------------------- 181 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCcccccc
Q 004824 410 INVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQS 489 (728)
Q Consensus 410 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~ 489 (728)
..+.++.||++||. |||+|||.+|+++++.
T Consensus 182 ---------------------------------~~~~~~~fS~~G~~--------~di~APG~~i~s~~~~--------- 211 (281)
T 1to2_E 182 ---------------------------------SSNQRASFSSVGPE--------LDVMAPGVSIQSTLPG--------- 211 (281)
T ss_dssp ---------------------------------TTSCBCTTCCCSTT--------CCEEEECSSEEEEETT---------
T ss_pred ---------------------------------CCCCcCCcCCCCCC--------ceEEecCCCeEeecCC---------
Confidence 12367899999984 5999999999999875
Q ss_pred CcccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCccCCCccCcc
Q 004824 490 GLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPN 569 (728)
Q Consensus 490 ~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~G~G~in~~ 569 (728)
+.|..++|||||||+|||++|||+|++|+|++.+||++|++||+++. .++.||+|+||+.
T Consensus 212 ----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g----------------~~~~~G~G~v~~~ 271 (281)
T 1to2_E 212 ----NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG----------------DSFYYGKGLINVQ 271 (281)
T ss_dssp ----TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS----------------CHHHHTTCBCCHH
T ss_pred ----CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC----------------CCCCcccceecHH
Confidence 57999999999999999999999999999999999999999998773 2348999999999
Q ss_pred ccCCC
Q 004824 570 KALDP 574 (728)
Q Consensus 570 ~Al~~ 574 (728)
+|+++
T Consensus 272 ~a~~~ 276 (281)
T 1to2_E 272 AAAQH 276 (281)
T ss_dssp HHTSS
T ss_pred HHhhh
Confidence 99875
No 16
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=6e-51 Score=428.93 Aligned_cols=265 Identities=26% Similarity=0.308 Sum_probs=211.0
Q ss_pred CCCC-CCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCccCCCCCC
Q 004824 102 SNYG-KGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKVRMNSPR 180 (728)
Q Consensus 102 ~~~G-~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~ 180 (728)
.++| +||+|||||||||++||+|.++ ++..+++... .......
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~---------------------------~~~~~~~~~~---------~~~~~d~ 46 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA---------------------------DLTVLPTLAP---------TAARSDG 46 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC---------------------------EEEECCCSSC---------CCCCTTC
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC---------------------------eeecCcCCCC---------CCCCCCC
Confidence 4578 6999999999999999999864 1111111111 0011223
Q ss_pred CCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC--CChHHHHHHHHHHHHCCCcEEEeccccC
Q 004824 181 DGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG--VYSSDVVAAIDQALQDGVDVLSLSLGLS 258 (728)
Q Consensus 181 d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIN~SlG~~ 258 (728)
|..||||||||||+|+..+ | +.||||+|+|+.+|++.+.+ ....++++||+||++++++|||||||..
T Consensus 47 ~~~gHGT~VAGiiag~~~~-----~-----~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~ 116 (282)
T 3zxy_A 47 FMSAHGTHVASIIFGQPET-----S-----VPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGEL 116 (282)
T ss_dssp HHHHHHHHHHHHHHCCTTS-----S-----SCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEE
T ss_pred CCCCcccceeehhhccCCc-----e-----eeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccc
Confidence 4568999999999997532 2 38999999999999986543 6777899999999999999999999984
Q ss_pred CCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEeccccccceeeeEEEcCCCcEEeeeecCCCCC
Q 004824 259 LNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLGNGVQINFKSLYPGNS 338 (728)
Q Consensus 259 ~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~g~s~~~~~~ 338 (728)
.........+..++..+.++|+++|+||||+|......+...|++|+|||.+
T Consensus 117 -~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~--------------------------- 168 (282)
T 3zxy_A 117 -TDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMD--------------------------- 168 (282)
T ss_dssp -ESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEEC---------------------------
T ss_pred -cccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEc---------------------------
Confidence 2233345567778888999999999999999998888888899999999842
Q ss_pred CCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEEeecccHHHH
Q 004824 339 SPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAFINVNDGQTI 418 (728)
Q Consensus 339 ~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~i~~~~g~~l 418 (728)
T Consensus 169 -------------------------------------------------------------------------------- 168 (282)
T 3zxy_A 169 -------------------------------------------------------------------------------- 168 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccccCcccCCcee
Q 004824 419 IDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLYSNFNL 498 (728)
Q Consensus 419 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~ 498 (728)
..+.++.||+||+.. .||||+|||.+|+++++. +.|..
T Consensus 169 ------------------------~~~~~~~~S~~~~~~-----~~~di~ApG~~i~s~~~~-------------~~~~~ 206 (282)
T 3zxy_A 169 ------------------------DHGHPLDFSNWGSTY-----EQQGILAPGEDILGAKPG-------------GGTER 206 (282)
T ss_dssp ------------------------TTSCBCSSSCCCHHH-----HHHEEEEECSSEEEECTT-------------SCEEE
T ss_pred ------------------------CCCccccccCCCCCc-----cccceeccCcceeeecCC-------------Cceee
Confidence 223678999999865 688999999999999885 68999
Q ss_pred eccccchhHHHHHHHHHHhhhC----CCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCccCCCccCccccCC
Q 004824 499 MSGTSMATPHVAGVAGLLKAAH----PDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPNKALD 573 (728)
Q Consensus 499 ~sGTSmAaP~VAG~aALl~~~~----p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~G~G~in~~~Al~ 573 (728)
++|||||||||||++|||++++ |.++|++||++|++||+++.. ..+.....+|+|+||+.+|++
T Consensus 207 ~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~-----------~~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 207 LSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDD-----------DAPEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC------------------CGGGTTCBCCHHHHHH
T ss_pred cCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCC-----------CCCCccCceeeeEeCHHHHHH
Confidence 9999999999999999999874 789999999999999987653 223345589999999999986
No 17
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=2.2e-50 Score=432.65 Aligned_cols=264 Identities=27% Similarity=0.411 Sum_probs=214.9
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCcc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKV 174 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 174 (728)
+..+|..+++|+||+|||||||||++||+|.++ ++..++|..++..
T Consensus 30 ~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~~~------- 75 (327)
T 2x8j_A 30 APAVWRASAKGAGQIIGVIDTGCQVDHPDLAER---------------------------IIGGVNLTTDYGG------- 75 (327)
T ss_dssp HHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG---------------------------EEEEEECSSGGGG-------
T ss_pred hHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc---------------------------ccCCccccCCCCC-------
Confidence 466899999999999999999999999999753 4555666554311
Q ss_pred CCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHH------CC
Q 004824 175 RMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQ------DG 247 (728)
Q Consensus 175 ~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~------~g 247 (728)
+.....|..||||||||||+|... + .| +.||||+|+|+.+|+++..+ +..+++++||+||++ .+
T Consensus 76 ~~~~~~d~~gHGT~VAgiia~~~~-~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~ 146 (327)
T 2x8j_A 76 DETNFSDNNGHGTHVAGTVAAAET-G---SG-----VVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQ 146 (327)
T ss_dssp CTTCCCCSSSHHHHHHHHHHCCCC-S---SB-----CCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCC
T ss_pred CCCCCCCCCCchHHHHHHHhccCC-C---CC-----cEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCC
Confidence 112356889999999999999842 1 12 38999999999999998776 678899999999999 89
Q ss_pred CcEEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCC-----CccccCCCceEEeccccccceeeeEEEc
Q 004824 248 VDVLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSY-----WTLINGAPWLLTVGAGTIDREFEGSLTL 322 (728)
Q Consensus 248 ~dVIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~-----~~~~~~ap~vitVgast~~~~~~~~~~~ 322 (728)
++|||||||.. . ....+..++..+.++|++||+||||+|... ..++...|++|+|||++
T Consensus 147 ~~Vin~S~G~~--~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~----------- 210 (327)
T 2x8j_A 147 MRIITMSLGGP--T---DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVD----------- 210 (327)
T ss_dssp CSEEEECEEBS--C---CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEEC-----------
T ss_pred ceEEEECCCcC--C---CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEEC-----------
Confidence 99999999993 2 245677778888999999999999999752 35667789999999843
Q ss_pred CCCcEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccc
Q 004824 323 GNGVQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIR 402 (728)
Q Consensus 323 ~~g~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~ 402 (728)
T Consensus 211 -------------------------------------------------------------------------------- 210 (327)
T 2x8j_A 211 -------------------------------------------------------------------------------- 210 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCC
Q 004824 403 SSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPIS 482 (728)
Q Consensus 403 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~ 482 (728)
..+.++.||++|| ||||+|||++|+++++.
T Consensus 211 ----------------------------------------~~~~~~~fS~~G~--------~~di~APG~~i~s~~~~-- 240 (327)
T 2x8j_A 211 ----------------------------------------FDLRLSDFTNTNE--------EIDIVAPGVGIKSTYLD-- 240 (327)
T ss_dssp ----------------------------------------TTCCBSCC---CC--------CCSEEEECSSEEEECST--
T ss_pred ----------------------------------------CCCCCCCccCCCC--------CceEecCcCceEeecCC--
Confidence 1236789999997 46999999999999875
Q ss_pred CccccccCcccCCceeeccccchhHHHHHHHHHHhhh-----CCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCC
Q 004824 483 SVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAA-----HPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPAS 557 (728)
Q Consensus 483 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-----~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~ 557 (728)
+.|..++|||||||+|||++|||+|+ +|.|++.+||++|++||++... +
T Consensus 241 -----------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~---------------~ 294 (327)
T 2x8j_A 241 -----------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF---------------T 294 (327)
T ss_dssp -----------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS---------------C
T ss_pred -----------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC---------------C
Confidence 57999999999999999999999999 9999999999999999997631 3
Q ss_pred CCccCCCccCccccCC
Q 004824 558 PLDMGAGHINPNKALD 573 (728)
Q Consensus 558 ~~~~G~G~in~~~Al~ 573 (728)
+..||+|+||+.+|++
T Consensus 295 ~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 295 AQAEGNGFLTLDLVER 310 (327)
T ss_dssp HHHHTTCEECTTHHHH
T ss_pred CCceeeeEECHHHHHH
Confidence 4589999999999987
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=2.3e-49 Score=422.73 Aligned_cols=281 Identities=32% Similarity=0.405 Sum_probs=222.6
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCcc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKV 174 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 174 (728)
...+|..+++|+||+|||||||||++||+|.++ +...++|.... ..
T Consensus 15 ~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~---------------------------~~~~~~~~~~~-------~~ 60 (310)
T 2ixt_A 15 NNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN---------------------------VEQCKDFTGAT-------TP 60 (310)
T ss_dssp TCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEESSSSS-------SC
T ss_pred chhhhhccCCCCCcEEEEEecCCCCCCHHHhhc---------------------------ccccccccCCC-------CC
Confidence 467999999999999999999999999999753 33444554321 01
Q ss_pred CCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHCCC-----
Q 004824 175 RMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQDGV----- 248 (728)
Q Consensus 175 ~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~g~----- 248 (728)
......|..||||||||||+|....+ ..| +.||||+|+|+.+|++...+ +..+++++||+||+++++
T Consensus 61 ~~~~~~d~~gHGT~vAgiia~~~~~n--~~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~ 133 (310)
T 2ixt_A 61 INNSCTDRNGHGTHVAGTALADGGSD--QAG-----IYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTK 133 (310)
T ss_dssp EETCCCCSSSHHHHHHHHHHCBCCTT--SCS-----CBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCCCCCCHHHHHHHHhccCCCC--CCc-----eEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCC
Confidence 11235678999999999999985221 112 38999999999999998776 678899999999999887
Q ss_pred cEEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCC--CccccCCCceEEeccccccceeeeEEEcCCCc
Q 004824 249 DVLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSY--WTLINGAPWLLTVGAGTIDREFEGSLTLGNGV 326 (728)
Q Consensus 249 dVIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~--~~~~~~ap~vitVgast~~~~~~~~~~~~~g~ 326 (728)
+|||||||.. . ....+..++..+.++|++||+||||+|... ..++...|++|+|||.+...
T Consensus 134 ~Vin~S~G~~--~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~------------ 196 (310)
T 2ixt_A 134 TIISMSLGSS--A---NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ------------ 196 (310)
T ss_dssp EEEEECCCBS--S---CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE------------
T ss_pred eEEEEcCCCC--C---CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc------------
Confidence 9999999993 2 245667777888999999999999999763 45667789999999853110
Q ss_pred EEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCcc
Q 004824 327 QINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFP 406 (728)
Q Consensus 327 ~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p 406 (728)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCC--ccccccCCCCCCC-CC---CCCCCcEEeCCCceeeccCC
Q 004824 407 AAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAP--MVDSYSSRGPFLS-CP---NIPKPDILAPGSLVLASWSP 480 (728)
Q Consensus 407 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSS~GP~~~-~~---~~lKPDI~APG~~I~sa~~~ 480 (728)
..+ .++.||++||... .. ...||||+|||.+|+++++.
T Consensus 197 ------------------------------------~~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s~~~~ 240 (310)
T 2ixt_A 197 ------------------------------------QNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYN 240 (310)
T ss_dssp ------------------------------------ETTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEEECTT
T ss_pred ------------------------------------cCCCeeeccccCCCCccCCccccccCCCeeEECCCCCEeeecCC
Confidence 011 5689999999532 11 12499999999999999875
Q ss_pred CCCccccccCcccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCc
Q 004824 481 ISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLD 560 (728)
Q Consensus 481 ~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~ 560 (728)
+.|..++|||||||||||++|||+|++|+|++.+||++|++||++.+..+.. ...+..++.
T Consensus 241 -------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~~------~a~~g~d~~ 301 (310)
T 2ixt_A 241 -------------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGY------GAAIGDDYA 301 (310)
T ss_dssp -------------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBST------TCCSSSBTT
T ss_pred -------------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCCc------ccccCCccc
Confidence 5899999999999999999999999999999999999999999987643311 124456779
Q ss_pred cCCCccCc
Q 004824 561 MGAGHINP 568 (728)
Q Consensus 561 ~G~G~in~ 568 (728)
+|||++|+
T Consensus 302 ~G~G~~~v 309 (310)
T 2ixt_A 302 SGFGFARV 309 (310)
T ss_dssp TBTCBCCC
T ss_pred cccceeec
Confidence 99999996
No 19
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=3.4e-50 Score=428.39 Aligned_cols=271 Identities=26% Similarity=0.325 Sum_probs=218.4
Q ss_pred CCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCccC
Q 004824 96 SGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKVR 175 (728)
Q Consensus 96 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 175 (728)
+++|+....++||+|||||||||++||+|.++ .+.+..++..+.
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~~---------- 54 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSGE---------- 54 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCCC----------
Confidence 56999988779999999999999999999864 122222222221
Q ss_pred CCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC--CChHHHHHHHHHHHHCCCcEEEe
Q 004824 176 MNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG--VYSSDVVAAIDQALQDGVDVLSL 253 (728)
Q Consensus 176 ~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIN~ 253 (728)
.....|..||||||||||+|+... | +.||||+|+|+.+|++.+.+ ....++++||+||++++++|||+
T Consensus 55 ~~~~~d~~gHGThVAGiiag~~~~-----~-----~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~ 124 (306)
T 4h6w_A 55 ANANGSMSTHGTHVASIIFGQHDS-----P-----VTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINV 124 (306)
T ss_dssp ----CCCCHHHHHHHHHHHCCTTS-----S-----SCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCCCchHHHHHHHHccccC-----C-----cceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeec
Confidence 123446789999999999997421 2 38999999999999986543 67788999999999999999999
Q ss_pred ccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEeccccccceeeeEEEcCCCcEEeeeec
Q 004824 254 SLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGTIDREFEGSLTLGNGVQINFKSL 333 (728)
Q Consensus 254 SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~g~s~ 333 (728)
|||.. .........+..++..+.++|+++|+||||+|.....++...+++|+|||++
T Consensus 125 s~g~~-~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~---------------------- 181 (306)
T 4h6w_A 125 SAGQL-TDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMD---------------------- 181 (306)
T ss_dssp CCCEE-ESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEEC----------------------
T ss_pred ccccc-ccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEec----------------------
Confidence 99974 2233445667778889999999999999999988888888889999999842
Q ss_pred CCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEEeecc
Q 004824 334 YPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAFINVN 413 (728)
Q Consensus 334 ~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~i~~~ 413 (728)
T Consensus 182 -------------------------------------------------------------------------------- 181 (306)
T 4h6w_A 182 -------------------------------------------------------------------------------- 181 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccccCccc
Q 004824 414 DGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGLLY 493 (728)
Q Consensus 414 ~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~ 493 (728)
..+.+++||++|+.. .||||+|||.+|+++++.
T Consensus 182 -----------------------------~~~~~~~~s~~g~~~-----~~~di~APG~~i~s~~~~------------- 214 (306)
T 4h6w_A 182 -----------------------------DQGKPVDFSNWGDAY-----QKQGILAPGKDILGAKPN------------- 214 (306)
T ss_dssp -----------------------------TTSCBCSSSCBCHHH-----HHHEEEEECSSEEEECTT-------------
T ss_pred -----------------------------CCCCccccccccCCc-----CcceeecCCcCcccccCC-------------
Confidence 223568899999865 688999999999999885
Q ss_pred CCceeeccccchhHHHHHHHHHHhhh----CCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCccCCCccCcc
Q 004824 494 SNFNLMSGTSMATPHVAGVAGLLKAA----HPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMGAGHINPN 569 (728)
Q Consensus 494 ~~y~~~sGTSmAaP~VAG~aALl~~~----~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~G~G~in~~ 569 (728)
+.|..++|||||||||||++|||+++ +|.|+|++||++|++||+++...+ ......||+|+||+.
T Consensus 215 ~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~-----------~~~~~~~G~G~ln~~ 283 (306)
T 4h6w_A 215 GGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD-----------TDDQSRCLMGKLNIL 283 (306)
T ss_dssp SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT-----------CSCGGGGTTCBCCHH
T ss_pred CceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC-----------CCCCCCcceeecCHH
Confidence 68999999999999999999999864 699999999999999999875432 123347999999999
Q ss_pred ccCC
Q 004824 570 KALD 573 (728)
Q Consensus 570 ~Al~ 573 (728)
+|++
T Consensus 284 ~Av~ 287 (306)
T 4h6w_A 284 DAIE 287 (306)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9987
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=1.3e-49 Score=425.90 Aligned_cols=265 Identities=28% Similarity=0.430 Sum_probs=217.4
Q ss_pred CCCCCCCCCCCC--CcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCC
Q 004824 95 LSGAWPASNYGK--GVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKL 172 (728)
Q Consensus 95 ~~~~~~~~~~G~--Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~ 172 (728)
+..+|..+ +|+ ||+|||||||||++||+|.++ +...++|..+...
T Consensus 17 ~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~~~----- 63 (320)
T 2z30_A 17 APSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---------------------------IAWCVSTLRGKVS----- 63 (320)
T ss_dssp CGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG---------------------------EEEEEECGGGCCB-----
T ss_pred hHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc---------------------------cccCccccCCccC-----
Confidence 46789988 899 999999999999999999753 3334444432100
Q ss_pred ccCCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHC-----
Q 004824 173 KVRMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQD----- 246 (728)
Q Consensus 173 ~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~----- 246 (728)
.......|..||||||||||+|.. +..| +.||||+|+|+.+|+++..+ +..+++++||+||+++
T Consensus 64 -~~~~~~~d~~gHGT~vAgiia~~~----n~~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~ 133 (320)
T 2z30_A 64 -TKLRDCADQNGHGTHVIGTIAALN----NDIG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVA 133 (320)
T ss_dssp -CCHHHHBCSSSHHHHHHHHHHCCS----SSBS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCS
T ss_pred -CCCCCCCCCCCCHHHHHHHHHccc----CCCc-----eEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCccccc
Confidence 000123578899999999999972 1123 38999999999999998776 6788999999999987
Q ss_pred ---------------CCcEEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEecccc
Q 004824 247 ---------------GVDVLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWTLINGAPWLLTVGAGT 311 (728)
Q Consensus 247 ---------------g~dVIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~~~~~ap~vitVgast 311 (728)
+++|||||||.. . ....+..++.++.++|++||+||||+|.....++...|++|+|||++
T Consensus 134 ~~~~~~~~~~~~~~~~~~Vin~S~G~~--~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~ 208 (320)
T 2z30_A 134 DKDGDGIIAGDPDDDAAEVISMSLGGP--A---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAID 208 (320)
T ss_dssp CTTSSSCCTTCTTSCCCSEEEECEEBS--C---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEEC
T ss_pred ccccccccccccccCCceEEEecCCCC--C---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeC
Confidence 999999999993 2 24556677778899999999999999988778888899999999843
Q ss_pred ccceeeeEEEcCCCcEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEe
Q 004824 312 IDREFEGSLTLGNGVQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFI 391 (728)
Q Consensus 312 ~~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~ 391 (728)
T Consensus 209 -------------------------------------------------------------------------------- 208 (320)
T 2z30_A 209 -------------------------------------------------------------------------------- 208 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCccccccccCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCC
Q 004824 392 SNSALLEVYIRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPG 471 (728)
Q Consensus 392 n~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG 471 (728)
..+.++.||++|| +|+|||
T Consensus 209 ---------------------------------------------------~~~~~~~~S~~g~----------~v~APG 227 (320)
T 2z30_A 209 ---------------------------------------------------SNDNIASFSNRQP----------EVSAPG 227 (320)
T ss_dssp ---------------------------------------------------TTSCBCTTSCSSC----------SEEEEC
T ss_pred ---------------------------------------------------CCCCcCcccCCCC----------CEEeCC
Confidence 1236789999986 789999
Q ss_pred CceeeccCCCCCccccccCcccCCceeeccccchhHHHHHHHHHHhhhC-------------CCCCHHHHHHHHHhcccc
Q 004824 472 SLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAH-------------PDWSPAAIRSALVTTASP 538 (728)
Q Consensus 472 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~-------------p~lsp~~ik~~L~~TA~~ 538 (728)
++|+++++. +.|..++|||||||||||++|||+|++ |.|++.+||++|++||++
T Consensus 228 ~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~ 294 (320)
T 2z30_A 228 VDILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADD 294 (320)
T ss_dssp SSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBC
T ss_pred CCeEEeccC-------------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhCcc
Confidence 999999875 579999999999999999999999998 999999999999999998
Q ss_pred CCCCCCccccCCCCCCCCCCCccCCCccCccccCCC
Q 004824 539 LDNTLSHIKDASNNNFPASPLDMGAGHINPNKALDP 574 (728)
Q Consensus 539 ~~~~g~~~~d~~~~~~~~~~~~~G~G~in~~~Al~~ 574 (728)
+...+ .+..||+|+||+.+|++.
T Consensus 295 ~~~~g-------------~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 295 LGPTG-------------WDADYGYGVVRAALAVQA 317 (320)
T ss_dssp CSSSS-------------SBTTTBTCBCCHHHHHHH
T ss_pred CCCCC-------------CCCCcCCceeCHHHHHHH
Confidence 74322 345899999999999863
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=9.8e-50 Score=432.15 Aligned_cols=271 Identities=21% Similarity=0.188 Sum_probs=218.5
Q ss_pred CCCCCCCCCCCC--CcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCC
Q 004824 95 LSGAWPASNYGK--GVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKL 172 (728)
Q Consensus 95 ~~~~~~~~~~G~--Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~ 172 (728)
...+|+. ++|+ ||+||||||||| +||+|.++ ++..++|..+. .
T Consensus 32 ~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~---------------------------~~~~~~~~~~~------~ 76 (347)
T 2iy9_A 32 LTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS---------------------------EFAKFSFTQDG------S 76 (347)
T ss_dssp CCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC---------------------------EEEEEECBTTC------C
T ss_pred hHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC---------------------------cccCCcccCCC------C
Confidence 3668887 8899 999999999999 99999753 34445554321 1
Q ss_pred ccCCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCCCChHHHHHHHHHHHHC------
Q 004824 173 KVRMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGVYSSDVVAAIDQALQD------ 246 (728)
Q Consensus 173 ~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g~~~~~i~~ai~~a~~~------ 246 (728)
+.+...+.|..||||||||||+|+ .|+ .||||+|+|+.+|+++..+.. ++++||+||+++
T Consensus 77 ~~~~~~~~d~~gHGT~vAgiia~~-------~g~-----~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~~~~~~ 142 (347)
T 2iy9_A 77 PFPVKKSEALYIHGTAMASLIASR-------YGI-----YGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNVFLAPG 142 (347)
T ss_dssp SSCCSSSHHHHHHHHHHHHHHHCS-------SSS-----CCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCTTSCTT
T ss_pred CCCCCCCCCCCCcHHHHHHHHhcc-------cCC-----cccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhhhcccC
Confidence 111224567889999999999997 122 899999999999999775443 999999999999
Q ss_pred CCcEEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCC-------CCccccCCC----------ceEEecc
Q 004824 247 GVDVLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPS-------YWTLINGAP----------WLLTVGA 309 (728)
Q Consensus 247 g~dVIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~-------~~~~~~~ap----------~vitVga 309 (728)
|++|||||||. .........+..++..+.++|++||+||||+|.. ...++...+ ++|+|||
T Consensus 143 ~~~Vin~S~G~--~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga 220 (347)
T 2iy9_A 143 EEKIINISGGQ--KGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAA 220 (347)
T ss_dssp EEEEEEESSCB--CCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEE
T ss_pred CceEEEecccc--CCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEE
Confidence 99999999998 3334466778888889999999999999999975 345667778 9999998
Q ss_pred ccc--cceeeeEEEcCCCcEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceE
Q 004824 310 GTI--DREFEGSLTLGNGVQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLG 387 (728)
Q Consensus 310 st~--~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g 387 (728)
++. +...
T Consensus 221 ~~~~~~g~~----------------------------------------------------------------------- 229 (347)
T 2iy9_A 221 LAQYRKGET----------------------------------------------------------------------- 229 (347)
T ss_dssp ECCCCTTSC-----------------------------------------------------------------------
T ss_pred cccCCCCce-----------------------------------------------------------------------
Confidence 643 1100
Q ss_pred EEEecCCCccccccccCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcE
Q 004824 388 AVFISNSALLEVYIRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDI 467 (728)
Q Consensus 388 ~i~~n~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI 467 (728)
......++.||++||+ ||||
T Consensus 230 -----------------------------------------------------~~~~~~~~~fS~~G~~-------~~di 249 (347)
T 2iy9_A 230 -----------------------------------------------------PVLHGGGITGSRFGNN-------WVDI 249 (347)
T ss_dssp -----------------------------------------------------CCBCCCSSSCBCBCTT-------TCSE
T ss_pred -----------------------------------------------------ecccCCCCCCCCCCCC-------CCEE
Confidence 0011245799999985 7899
Q ss_pred EeCCCceeeccCCCCCccccccCcccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCccc
Q 004824 468 LAPGSLVLASWSPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK 547 (728)
Q Consensus 468 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~ 547 (728)
+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++||++....+
T Consensus 250 ~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~---- 312 (347)
T 2iy9_A 250 AAPGQNITFLRPD-------------AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLV---- 312 (347)
T ss_dssp EEECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGGT----
T ss_pred EeCCCCeEeecCC-------------CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCCC----
Confidence 9999999999885 68999999999999999999999999999999999999999999875422
Q ss_pred cCCCCCCCCCCCccCCCccCccccCCC
Q 004824 548 DASNNNFPASPLDMGAGHINPNKALDP 574 (728)
Q Consensus 548 d~~~~~~~~~~~~~G~G~in~~~Al~~ 574 (728)
...+|+|+||+.+|++.
T Consensus 313 ----------~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 313 ----------DKVTEGRVLNAEKAISM 329 (347)
T ss_dssp ----------TTSGGGEECCHHHHHHH
T ss_pred ----------CccccCCEecHHHHHHH
Confidence 24899999999999874
No 22
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=1.4e-48 Score=422.14 Aligned_cols=299 Identities=27% Similarity=0.374 Sum_probs=220.3
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCcee---eeeeeccccccccCCC
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKL---IGARFFNKGLIANNPK 171 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~ki---ig~~~~~~~~~~~~~~ 171 (728)
+..+|+.+++|+||+||||||||+ +||+|.++-. ..|+-.......+. .+.+. .....+.+.+.. ..
T Consensus 21 ~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~----~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~--~~ 90 (340)
T 3lpc_A 21 ADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVL----PGYDFISNSQISLD---GDGRDADPFDEGDWFDNWAC--GG 90 (340)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBC----CCEECCCCHHHHCS---SSSSBSCCBCCCCCBCTTTT--SC
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCC-CChhhhcccc----cCccccCCcccccc---CCCccCCccccccccccccc--cC
Confidence 466999999999999999999998 9999986411 11110000000000 00000 000000000000 01
Q ss_pred CccCCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCCCChHHHHHHHHHHHH------
Q 004824 172 LKVRMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGVYSSDVVAAIDQALQ------ 245 (728)
Q Consensus 172 ~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g~~~~~i~~ai~~a~~------ 245 (728)
.+.+.....|..||||||||||+|...+.. | +.||||+|+|+.+|++...++..++++++|+||++
T Consensus 91 ~~~~~~~~~d~~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~~~ 162 (340)
T 3lpc_A 91 RPDPRKERSDSSWHGSHVAGTIAAVTNNRI---G-----VAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGI 162 (340)
T ss_dssp TTCGGGSCBCCCCHHHHHHHHHHCCCSSSS---S-----CCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCTTS
T ss_pred CCCcccCCCCCCCCHHHHHHHHHccCCCCC---c-----ceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhccccccc
Confidence 122233467889999999999999865432 2 28999999999999999888889999999999998
Q ss_pred ----CCCcEEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCC-ccccCCCceEEeccccccceeeeEE
Q 004824 246 ----DGVDVLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYW-TLINGAPWLLTVGAGTIDREFEGSL 320 (728)
Q Consensus 246 ----~g~dVIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~ap~vitVgast~~~~~~~~~ 320 (728)
.+++|||||||.. . .....+..++..+.++|++||+||||+|.... ..+...+++|+|||++
T Consensus 163 ~~~~~~~~Vin~S~G~~--~--~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~--------- 229 (340)
T 3lpc_A 163 PENRNPAKVINMSLGSD--G--QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATT--------- 229 (340)
T ss_dssp CCCSSCCSEEEECCCEE--S--CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEEC---------
T ss_pred ccccCCCeEEEeCcCCC--C--CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCC---------
Confidence 8999999999983 2 12345666777888999999999999997653 4577889999999843
Q ss_pred EcCCCcEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccc
Q 004824 321 TLGNGVQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVY 400 (728)
Q Consensus 321 ~~~~g~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~ 400 (728)
T Consensus 230 -------------------------------------------------------------------------------- 229 (340)
T 3lpc_A 230 -------------------------------------------------------------------------------- 229 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCC
Q 004824 401 IRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSP 480 (728)
Q Consensus 401 ~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~ 480 (728)
..+.++.||++|| ||||+|||.+|+++++.
T Consensus 230 ------------------------------------------~~~~~~~~S~~g~--------~~di~ApG~~i~s~~~~ 259 (340)
T 3lpc_A 230 ------------------------------------------SRGIRASFSNYGV--------DVDLAAPGQDILSTVDS 259 (340)
T ss_dssp ------------------------------------------TTSSBCTTCCBST--------TCCEEEECSSEEEEEES
T ss_pred ------------------------------------------CCCCcCCCCCCCC--------CceEEecCCCeecccCC
Confidence 2236789999996 67999999999999875
Q ss_pred CCCccccccCcccCCceeeccccchhHHHHHHHHHHhhh-C---CCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCC
Q 004824 481 ISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAA-H---PDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPA 556 (728)
Q Consensus 481 ~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-~---p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~ 556 (728)
.... ...+.|..++|||||||||||++|||+|+ + |.|++++||++|++||++... .
T Consensus 260 ~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~--------------~ 319 (340)
T 3lpc_A 260 GTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG--------------R 319 (340)
T ss_dssp CSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS--------------C
T ss_pred CCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC--------------C
Confidence 3211 11246999999999999999999999998 5 999999999999999988742 1
Q ss_pred CCCccCCCccCccccCCC
Q 004824 557 SPLDMGAGHINPNKALDP 574 (728)
Q Consensus 557 ~~~~~G~G~in~~~Al~~ 574 (728)
....||+|+||+.+||+.
T Consensus 320 ~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 320 LDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp CSSCCCSSBCCHHHHHHH
T ss_pred CCCCcccceecHHHHHHH
Confidence 344899999999999874
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=6.6e-48 Score=429.98 Aligned_cols=291 Identities=26% Similarity=0.336 Sum_probs=222.9
Q ss_pred CCCCC-CCCCCCCcEEEEEccCCCC------CCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeecccccccc
Q 004824 96 SGAWP-ASNYGKGVIIGLVDTGIWP------ESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIAN 168 (728)
Q Consensus 96 ~~~~~-~~~~G~Gv~VgVIDtGid~------~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~ 168 (728)
+.+|. .+++|+||+|||||||||+ .||+|.++ ++..++|.+.
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~---------------------------i~~~~~~~~~---- 59 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK---------------------------ITALYALGRT---- 59 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC---------------------------EEEEEETTTT----
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC---------------------------EeeeccccCC----
Confidence 56887 6999999999999999999 79998753 4444455332
Q ss_pred CCCCccCCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCCC---ChHHHHHHHHHHHH
Q 004824 169 NPKLKVRMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGV---YSSDVVAAIDQALQ 245 (728)
Q Consensus 169 ~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g~---~~~~i~~ai~~a~~ 245 (728)
..+.|..||||||||||+|+.. + +.||||+|+|+.+|+++..+. ...++.++|++|++
T Consensus 60 --------~~~~d~~gHGT~VAgiiag~g~------~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~ 120 (434)
T 1wmd_A 60 --------NNANDTNGHGTHVAGSVLGNGS------T-----NKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYS 120 (434)
T ss_dssp --------TCCCCSSSHHHHHHHHHHCCSS------S-----SCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHH
T ss_pred --------CCCCCCCCcHHHHHHHHHcCCC------C-----ceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHh
Confidence 2466789999999999999642 1 379999999999999987663 45689999999999
Q ss_pred CCCcEEEeccccCCCCCCChhhHHHHHHHHH-HhCCcEEEEecCCCCCCCC--ccccCCCceEEeccccccceeeeEEEc
Q 004824 246 DGVDVLSLSLGLSLNGIFLEDDAIAVATFAA-MEKGVLVVASAGNDGPSYW--TLINGAPWLLTVGAGTIDREFEGSLTL 322 (728)
Q Consensus 246 ~g~dVIN~SlG~~~~~~~~~~~~~~~~~~~a-~~~Gi~vV~AAGN~g~~~~--~~~~~ap~vitVgast~~~~~~~~~~~ 322 (728)
+|++|||||||.. ....+ +....++.++ .++|++||+||||+|.... ..+..++++|+|||++..+...
T Consensus 121 ~g~~Vin~S~G~~--~~~~~-~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~----- 192 (434)
T 1wmd_A 121 AGARIHTNSWGAA--VNGAY-TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF----- 192 (434)
T ss_dssp TTCSEEEECCCBC--CTTCC-CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG-----
T ss_pred cCCeEEEecCCCC--cCCcC-CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc-----
Confidence 9999999999983 21111 2334444444 5899999999999998643 4567789999999965332100
Q ss_pred CCCcEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccc
Q 004824 323 GNGVQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIR 402 (728)
Q Consensus 323 ~~g~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~ 402 (728)
+.
T Consensus 193 -------------~~----------------------------------------------------------------- 194 (434)
T 1wmd_A 193 -------------GS----------------------------------------------------------------- 194 (434)
T ss_dssp -------------CG-----------------------------------------------------------------
T ss_pred -------------Cc-----------------------------------------------------------------
Confidence 00
Q ss_pred cCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCC
Q 004824 403 SSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPIS 482 (728)
Q Consensus 403 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~ 482 (728)
.....+.+++||++||+.+++ +||||+|||++|+++++...
T Consensus 195 -------------------------------------~~~~~~~~a~fS~~G~~~~g~--~kpdi~ApG~~i~s~~~~~~ 235 (434)
T 1wmd_A 195 -------------------------------------YADNINHVAQFSSRGPTKDGR--IKPDVMAPGTFILSARSSLA 235 (434)
T ss_dssp -------------------------------------GGSCTTSBCTTSCCCCCTTSC--CCCCEEEECSSEEEECCTTC
T ss_pred -------------------------------------ccCCCCccccccCCCCCCCCC--CCceEEcCCCCeEecCCCCC
Confidence 011245789999999999866 99999999999999986532
Q ss_pred CccccccCcccCCceeeccccchhHHHHHHHHHHhhhCCCC-----CHHHHHHHHHhccccCCCCCCccccCCCCCCCCC
Q 004824 483 SVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDW-----SPAAIRSALVTTASPLDNTLSHIKDASNNNFPAS 557 (728)
Q Consensus 483 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~l-----sp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~ 557 (728)
....+ .....+.|..++|||||||||||++|||+|++|++ ++++||++|++||+++.. ...
T Consensus 236 ~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~-------------~~~ 301 (434)
T 1wmd_A 236 PDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL-------------GYP 301 (434)
T ss_dssp CGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS-------------CSS
T ss_pred CCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC-------------CCC
Confidence 11100 00113689999999999999999999999998865 899999999999987532 235
Q ss_pred CCccCCCccCccccCCCC
Q 004824 558 PLDMGAGHINPNKALDPG 575 (728)
Q Consensus 558 ~~~~G~G~in~~~Al~~~ 575 (728)
++.||||+||+.+|++..
T Consensus 302 ~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 302 NGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp CTTTTTCBCCHHHHHTCE
T ss_pred CccCCcCeEeHHHhcccc
Confidence 568999999999999754
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1e-46 Score=396.02 Aligned_cols=236 Identities=30% Similarity=0.416 Sum_probs=201.5
Q ss_pred CCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCccC
Q 004824 96 SGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKVR 175 (728)
Q Consensus 96 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 175 (728)
..+|..+++|+||+|||||||||++||+|.++ ++..++|.+..
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~~---------- 61 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR---------------------------SVSGYDFVDND---------- 61 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC---------------------------EEEEEETTTTB----------
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC---------------------------ccccccccCCC----------
Confidence 56899999999999999999999999999753 34445554321
Q ss_pred CCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHC--CCcEEE
Q 004824 176 MNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQD--GVDVLS 252 (728)
Q Consensus 176 ~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~--g~dVIN 252 (728)
..+.|..+|||||||||+|+. .||||+|+|+.+|+++..+ +..+++++||+|++++ +++|||
T Consensus 62 -~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin 126 (284)
T 1sh7_A 62 -ADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVAN 126 (284)
T ss_dssp -SCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEE
T ss_pred -CCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEE
Confidence 245678999999999999873 6999999999999998766 6788999999999984 799999
Q ss_pred eccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCC-CccccCCCceEEeccccccceeeeEEEcCCCcEEeee
Q 004824 253 LSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSY-WTLINGAPWLLTVGAGTIDREFEGSLTLGNGVQINFK 331 (728)
Q Consensus 253 ~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~g~ 331 (728)
||||. . ....+..++.++.++|++||+||||+|... ...+...|++|+||+++
T Consensus 127 ~S~G~--~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~-------------------- 180 (284)
T 1sh7_A 127 MSLGG--G----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTT-------------------- 180 (284)
T ss_dssp ECCCB--S----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEEC--------------------
T ss_pred eCCCC--C----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEec--------------------
Confidence 99999 3 245677778889999999999999999764 34567789999999843
Q ss_pred ecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEEee
Q 004824 332 SLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAFIN 411 (728)
Q Consensus 332 s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~i~ 411 (728)
T Consensus 181 -------------------------------------------------------------------------------- 180 (284)
T 1sh7_A 181 -------------------------------------------------------------------------------- 180 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccccCc
Q 004824 412 VNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGL 491 (728)
Q Consensus 412 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~ 491 (728)
..+.+++||++||. |||+|||++|+++++.
T Consensus 181 -------------------------------~~~~~~~~S~~G~~--------~di~ApG~~i~s~~~~----------- 210 (284)
T 1sh7_A 181 -------------------------------SSDSRSSFSNWGSC--------VDLFAPGSQIKSAWYD----------- 210 (284)
T ss_dssp -------------------------------TTSBBCTTCCBSTT--------CCEEEECSSEEEECTT-----------
T ss_pred -------------------------------CCCCcCcccCCCCc--------cEEEeccCCeEEecCC-----------
Confidence 12367899999985 4999999999999875
Q ss_pred ccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCC
Q 004824 492 LYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDN 541 (728)
Q Consensus 492 ~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~ 541 (728)
+.|..++|||||||||||++|||+|++|+|++++||++|++||++...
T Consensus 211 --~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 258 (284)
T 1sh7_A 211 --GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKV 258 (284)
T ss_dssp --SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred --CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCc
Confidence 589999999999999999999999999999999999999999987643
No 25
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=3.3e-47 Score=454.66 Aligned_cols=362 Identities=24% Similarity=0.281 Sum_probs=245.0
Q ss_pred CCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC---CChHHHHHHHHHHHH-----CCCcEE
Q 004824 180 RDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG---VYSSDVVAAIDQALQ-----DGVDVL 251 (728)
Q Consensus 180 ~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g---~~~~~i~~ai~~a~~-----~g~dVI 251 (728)
.|+.||||||||||||.. ++. | +.||||+|+|+.+|+++..+ .....++.+|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~~---g-----~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SSR---D-----VDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SSS---S-----SCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CCC---C-----ceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478899999999999986 221 2 38999999999999997643 255778888888887 799999
Q ss_pred EeccccCCCCCCChhhHHHHHHHHHH-hCCcEEEEecCCCCCCCCc--ccc--CCCceEEeccccccceeeeEEEcCCCc
Q 004824 252 SLSLGLSLNGIFLEDDAIAVATFAAM-EKGVLVVASAGNDGPSYWT--LIN--GAPWLLTVGAGTIDREFEGSLTLGNGV 326 (728)
Q Consensus 252 N~SlG~~~~~~~~~~~~~~~~~~~a~-~~Gi~vV~AAGN~g~~~~~--~~~--~ap~vitVgast~~~~~~~~~~~~~g~ 326 (728)
|||||.. ......+.+..++.++. ++|++||+||||+|....+ .+. .++++|+|||++.+.........
T Consensus 338 NmS~G~~--~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~---- 411 (1354)
T 3lxu_X 338 NMSYGEH--ANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM---- 411 (1354)
T ss_dssp EECCCCC--CSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC--------
T ss_pred EcCCccC--CCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc----
Confidence 9999994 33233456666777775 8999999999999986543 344 37999999996543221000000
Q ss_pred EEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCcc
Q 004824 327 QINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFP 406 (728)
Q Consensus 327 ~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p 406 (728)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccc
Q 004824 407 AAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAE 486 (728)
Q Consensus 407 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~ 486 (728)
.....+.+++|||+||+.+++ +||||+|||++|+++....
T Consensus 412 ---------------------------------~~~~~g~~asFSS~GPt~dg~--~KpDIaAPG~~I~St~~~~----- 451 (1354)
T 3lxu_X 412 ---------------------------------REKLPGNVYTWTSRDPCIDGG--QGVTVCAPGGAIASVPQFT----- 451 (1354)
T ss_dssp ---------------------------------------CCCCCCCCSCCSSSS--CCEEEEEEC---------------
T ss_pred ---------------------------------ccCCCCccccccCCCCCccCC--CcceEEecCceEEEeecCC-----
Confidence 011224789999999998866 9999999999999875532
Q ss_pred cccCcccCCceeeccccchhHHHHHHHHHHhh----hCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCccC
Q 004824 487 VQSGLLYSNFNLMSGTSMATPHVAGVAGLLKA----AHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDMG 562 (728)
Q Consensus 487 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~----~~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~G 562 (728)
.+.|..++|||||||||||++|||++ .+|+|++.+||++|++||++... ..++.||
T Consensus 452 ------~~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~--------------~~~~~~G 511 (1354)
T 3lxu_X 452 ------MSKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY--------------VDPFAQG 511 (1354)
T ss_dssp -----------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT--------------SCTTTSS
T ss_pred ------CCceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC--------------CCccccc
Confidence 25789999999999999999999986 79999999999999999988753 2345899
Q ss_pred CCccCccccCCCCceecCChhhHHHHHHhcCCCccceeeccccccccCCCCCCCCCCceeeeccCCCCCCCCceeEEEEE
Q 004824 563 AGHINPNKALDPGLVYDATAEDYIKLLCAMNYKPEQIRIFTKSSQKCNNRSLDLNYPSFITFFNDYDSSSDEKVVKEFWR 642 (728)
Q Consensus 563 ~G~in~~~Al~~~lv~~~~~~dy~~~lc~~~~~~~~~~~~~~~~~~c~~~~~~ln~psi~~~~~~~~~~~~~~~~~t~~r 642 (728)
+|+||+.+|++..+.|+....+|+.|+|..+..... .++..... | +. . ...+++++-
T Consensus 512 ~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~r-gIylR~~~-~---------~~-----------~-~~~tv~V~p 568 (1354)
T 3lxu_X 512 HGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADK-GIHLRQGV-Q---------RN-----------S-IDYNVYIEP 568 (1354)
T ss_dssp SSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBS-SEEECSSC-C---------CS-----------C-EEEEEEEEE
T ss_pred CCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCC-ceEEeccc-c---------CC-----------c-eEEEEEEee
Confidence 999999999999999999999999999987643211 11111000 0 00 0 001222332
Q ss_pred EEEeC---CCC-Ce--EEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEecccCCCceEEEEEEEEeC---CCCcE
Q 004824 643 TVTNA---EEV-GT--AYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGPKLLEKDVVYGSISWVDD---DGRYE 713 (728)
Q Consensus 643 tvtn~---g~~-~~--ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G~i~~~~~---~~~~~ 713 (728)
+..|. ... .. .-++.+...+ --|+ -|..|.+. ++.++|.|++++. ....+..++.|..-|. ..++.
T Consensus 569 ~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p~~l~l~--~~~r~~~v~vDp~-~L~~G~h~~~v~~~D~~~~~~gp~ 643 (1354)
T 3lxu_X 569 IFYNDKEADPKDKFNFNVRLNLIASQ-PWVQ-CGAFLDLS--YGTRSIAVRVDPT-GLQPGVHSAVIRAYDTDCVQKGSL 643 (1354)
T ss_dssp EESSCSCSSSTTCSCCCCEEEEEESS-TTEE-ECSCEECT--TSCEEEEEEECGG-GCCSEEEEEEEEEEESSCTTSCCS
T ss_pred eecCcccCChhhccceEEEEEEecCC-Ccee-cccceeec--CCCceEEEEECCC-CCCCcceeEEEEEEEcCCcccCce
Confidence 33221 111 11 1222222221 1222 27777664 7888999999984 3566889999987764 34699
Q ss_pred EEeEEEEEeeC
Q 004824 714 VRSPIVATNLV 724 (728)
Q Consensus 714 v~~P~~~~~~~ 724 (728)
.|+||.|.-+.
T Consensus 644 f~ipvTv~~P~ 654 (1354)
T 3lxu_X 644 FEIPVTVVQPH 654 (1354)
T ss_dssp EEEEEEEEECB
T ss_pred EEeeEEEEeee
Confidence 99999987654
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=3e-46 Score=391.77 Aligned_cols=237 Identities=32% Similarity=0.411 Sum_probs=200.4
Q ss_pred CCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCccC
Q 004824 96 SGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKVR 175 (728)
Q Consensus 96 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 175 (728)
..+|..+++|+||+|+|||||||++||+|.++ +...++|.++.
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------------~~~~~d~~~~~---------- 63 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------------ASSGYDFIDND---------- 63 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTTTB----------
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------------cccCeecCCCC----------
Confidence 46899999999999999999999999999753 33344554321
Q ss_pred CCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHH--CCCcEEE
Q 004824 176 MNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQ--DGVDVLS 252 (728)
Q Consensus 176 ~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~--~g~dVIN 252 (728)
..+.|..+|||||||||+|+. .||||+|+|+.+|++++.+ +..+++++||+|+++ .+++|||
T Consensus 64 -~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin 128 (278)
T 2b6n_A 64 -YDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVAN 128 (278)
T ss_dssp -SCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEE
T ss_pred -CCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEE
Confidence 235688999999999999862 6999999999999998766 778899999999998 5999999
Q ss_pred eccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCC-ccccCCCceEEeccccccceeeeEEEcCCCcEEeee
Q 004824 253 LSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYW-TLINGAPWLLTVGAGTIDREFEGSLTLGNGVQINFK 331 (728)
Q Consensus 253 ~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~g~ 331 (728)
||||.. . ...+..++.++.++|++||+||||+|.... ..+...|++|+|||++
T Consensus 129 ~S~G~~--~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~-------------------- 182 (278)
T 2b6n_A 129 MSLGGG--A----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTT-------------------- 182 (278)
T ss_dssp ECCCEE--C----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC--------------------
T ss_pred ECCCCC--c----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeC--------------------
Confidence 999993 2 356677778889999999999999997653 3567789999999843
Q ss_pred ecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEEee
Q 004824 332 SLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAFIN 411 (728)
Q Consensus 332 s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~i~ 411 (728)
T Consensus 183 -------------------------------------------------------------------------------- 182 (278)
T 2b6n_A 183 -------------------------------------------------------------------------------- 182 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccccCc
Q 004824 412 VNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGL 491 (728)
Q Consensus 412 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~ 491 (728)
..+.++.||++||. |||+|||.+|++++...
T Consensus 183 -------------------------------~~~~~~~~S~~G~~--------~di~ApG~~i~s~~~~~---------- 213 (278)
T 2b6n_A 183 -------------------------------SNDSRSSFSNYGTC--------LDIYAPGSSITSSWYTS---------- 213 (278)
T ss_dssp -------------------------------TTSBBCTTCCBSTT--------CCEEEECSSEEEECTTS----------
T ss_pred -------------------------------CCCCcCCcCCCCCC--------CeEEeCCCCeECcccCC----------
Confidence 12367899999974 59999999999988642
Q ss_pred ccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCC
Q 004824 492 LYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLD 540 (728)
Q Consensus 492 ~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~ 540 (728)
.+.|..++|||||||||||++|||+|++|+|++.+||++|++||++..
T Consensus 214 -~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 214 -NSATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp -TTCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred -CCCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 257899999999999999999999999999999999999999998753
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=4.1e-46 Score=390.75 Aligned_cols=237 Identities=29% Similarity=0.394 Sum_probs=202.3
Q ss_pred CCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCccC
Q 004824 96 SGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKVR 175 (728)
Q Consensus 96 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 175 (728)
..+|..+++|+||+|||||||||++||+|.++ +...++|..
T Consensus 21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~------------ 61 (276)
T 4dzt_A 21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGR---------------------------ARVGYDALG------------ 61 (276)
T ss_dssp CSCEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTS------------
T ss_pred ccceecCCCCCCcEEEEEccCCCCCChhHccC---------------------------eeccccCCC------------
Confidence 56899999999999999999999999999753 333344433
Q ss_pred CCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHC--CCcEEE
Q 004824 176 MNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQD--GVDVLS 252 (728)
Q Consensus 176 ~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~--g~dVIN 252 (728)
....|..||||||||||+|.. .||||+|+|+.+|+++..+ ...++++++|+|+++. +++|||
T Consensus 62 -~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin 126 (276)
T 4dzt_A 62 -GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVAN 126 (276)
T ss_dssp -SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEE
T ss_pred -CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEE
Confidence 235678899999999999873 6999999999999998776 7888999999999987 899999
Q ss_pred eccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCc-cccCCCceEEeccccccceeeeEEEcCCCcEEeee
Q 004824 253 LSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWT-LINGAPWLLTVGAGTIDREFEGSLTLGNGVQINFK 331 (728)
Q Consensus 253 ~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~g~ 331 (728)
||||.. . ...+..++..+.++|+++|+||||+|..... .+...+++|+|||.+
T Consensus 127 ~S~g~~--~----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~-------------------- 180 (276)
T 4dzt_A 127 MSLGGG--V----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATT-------------------- 180 (276)
T ss_dssp ECCCEE--C----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC--------------------
T ss_pred ECCCCC--C----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEEC--------------------
Confidence 999983 2 4567778888999999999999999976543 367889999999842
Q ss_pred ecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEEee
Q 004824 332 SLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAFIN 411 (728)
Q Consensus 332 s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~i~ 411 (728)
T Consensus 181 -------------------------------------------------------------------------------- 180 (276)
T 4dzt_A 181 -------------------------------------------------------------------------------- 180 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccccCc
Q 004824 412 VNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQSGL 491 (728)
Q Consensus 412 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~ 491 (728)
..+.+++||++||.. ||+|||.+|++++...
T Consensus 181 -------------------------------~~~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~---------- 211 (276)
T 4dzt_A 181 -------------------------------SSDARASFSNYGSCV--------DLFAPGASIPSAWYTS---------- 211 (276)
T ss_dssp -------------------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEECTTS----------
T ss_pred -------------------------------CCCCcCCcCCCCCCc--------eEEeCCCCeEccccCC----------
Confidence 223678999999864 9999999999998753
Q ss_pred ccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCC
Q 004824 492 LYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNT 542 (728)
Q Consensus 492 ~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~ 542 (728)
...|..++|||||||+|||++|||+|++|++++++||++|++||++....
T Consensus 212 -~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~ 261 (276)
T 4dzt_A 212 -DTATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRLS 261 (276)
T ss_dssp -SSCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCB
T ss_pred -CCceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCccC
Confidence 25799999999999999999999999999999999999999999987543
No 28
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=2.9e-46 Score=391.53 Aligned_cols=228 Identities=30% Similarity=0.396 Sum_probs=194.8
Q ss_pred CCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCccCCC
Q 004824 98 AWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKVRMN 177 (728)
Q Consensus 98 ~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 177 (728)
.|. ..+|+||+|+|||||||++||+|.++ +...++|..
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~---------------------------~~~~~~~~~-------------- 61 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQMVKTYYY-------------- 61 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEESSS--------------
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc---------------------------cccccCCCC--------------
Confidence 454 37899999999999999999999753 333444431
Q ss_pred CCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHCCC-------c
Q 004824 178 SPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQDGV-------D 249 (728)
Q Consensus 178 ~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~g~-------d 249 (728)
.+.|..+|||||||||+|+. .||||+|+|+.+|+++..+ +..+++++||+|++++++ +
T Consensus 62 ~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~ 127 (279)
T 2pwa_A 62 SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGV 127 (279)
T ss_dssp CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEE
T ss_pred CCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCcc
Confidence 25678899999999999862 7999999999999998876 788999999999999887 9
Q ss_pred EEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCC-ccccCCCceEEeccccccceeeeEEEcCCCcEE
Q 004824 250 VLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYW-TLINGAPWLLTVGAGTIDREFEGSLTLGNGVQI 328 (728)
Q Consensus 250 VIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~ 328 (728)
|||||||.. ....+..++..+.++|++||+||||+|.... ..+...|++|+|||++
T Consensus 128 Vin~S~G~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~----------------- 184 (279)
T 2pwa_A 128 VASLSLGGG------YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASD----------------- 184 (279)
T ss_dssp EEEECCCEE------CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEEC-----------------
T ss_pred EEEecCCCC------CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEec-----------------
Confidence 999999982 2456777888899999999999999998653 4567789999999843
Q ss_pred eeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEE
Q 004824 329 NFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAA 408 (728)
Q Consensus 329 ~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~ 408 (728)
T Consensus 185 -------------------------------------------------------------------------------- 184 (279)
T 2pwa_A 185 -------------------------------------------------------------------------------- 184 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccc
Q 004824 409 FINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQ 488 (728)
Q Consensus 409 ~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~ 488 (728)
..+.++.||++||. |||+|||++|+++++.
T Consensus 185 ----------------------------------~~~~~~~~S~~G~~--------~di~APG~~i~s~~~~-------- 214 (279)
T 2pwa_A 185 ----------------------------------RYDRRSSFSNYGSV--------LDIFGPGTDILSTWIG-------- 214 (279)
T ss_dssp ----------------------------------TTSBBCTTCCBSTT--------CCEEEECSSEEEEETT--------
T ss_pred ----------------------------------CCCCcCCcCCCCCc--------ceEEEecCCeEEeecC--------
Confidence 12367899999985 4999999999999885
Q ss_pred cCcccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCC
Q 004824 489 SGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLD 540 (728)
Q Consensus 489 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~ 540 (728)
+.|..++|||||||||||++|||+|+ |++++.+||++|++||++..
T Consensus 215 -----~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~ 260 (279)
T 2pwa_A 215 -----GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGD 260 (279)
T ss_dssp -----TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESC
T ss_pred -----CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCcccc
Confidence 57899999999999999999999999 99999999999999998763
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=8.1e-47 Score=437.08 Aligned_cols=299 Identities=25% Similarity=0.240 Sum_probs=206.0
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCcc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKV 174 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 174 (728)
+..+|..+++|+||+|||||||||++||+|.+.- +.+.++|..+.
T Consensus 59 ~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~--------------------------~~~~~~~~~~~--------- 103 (600)
T 2oxa_A 59 LWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGS--------- 103 (600)
T ss_dssp CHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTCS---------
T ss_pred hHHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc--------------------------ccCceeccCCC---------
Confidence 3568999999999999999999999999998530 11223333321
Q ss_pred CCCCCCC-CCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCCCCh--HHHHHHHHHHHHCCCcEE
Q 004824 175 RMNSPRD-GSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGVYS--SDVVAAIDQALQDGVDVL 251 (728)
Q Consensus 175 ~~~~~~d-~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g~~~--~~i~~ai~~a~~~g~dVI 251 (728)
....+.| ..||||||||||||. .++. | +.||||+|+|+.+|+++..+... ..++++...+..++++||
T Consensus 104 ~d~~p~d~~~gHGT~vAGiiaa~-~n~~---g-----~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vi 174 (600)
T 2oxa_A 104 DDPTPTDPDTGHGTSVSGIIAAV-DNAI---G-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVF 174 (600)
T ss_dssp SCCCCCSTTCCHHHHHHHHHHCC-SSSS---S-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEE
T ss_pred CCCCCCCCCCCCccHHHHHhhcc-cCCC---c-----ceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEE
Confidence 0122344 789999999999998 3322 2 28999999999999998766442 344444444778899999
Q ss_pred EeccccCCCCCC----ChhhHHHHHHHH---HHhCCcEEEEecCCCCCCCC----------------------ccccCCC
Q 004824 252 SLSLGLSLNGIF----LEDDAIAVATFA---AMEKGVLVVASAGNDGPSYW----------------------TLINGAP 302 (728)
Q Consensus 252 N~SlG~~~~~~~----~~~~~~~~~~~~---a~~~Gi~vV~AAGN~g~~~~----------------------~~~~~ap 302 (728)
|||||.. .... .....+..++.. +.++|++||+||||+|.... ..++.++
T Consensus 175 n~S~G~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~ 253 (600)
T 2oxa_A 175 NHSYRMS-VVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNF 253 (600)
T ss_dssp EECCCCC-CSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSS
T ss_pred EEeccCC-CCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCc
Confidence 9999984 1111 122333333322 45789999999999986421 1122455
Q ss_pred ceEEeccccccceeeeEEEcCCCcEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHH
Q 004824 303 WLLTVGAGTIDREFEGSLTLGNGVQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVA 382 (728)
Q Consensus 303 ~vitVgast~~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~ 382 (728)
|+|+|||.+
T Consensus 254 ~vItVgA~~----------------------------------------------------------------------- 262 (600)
T 2oxa_A 254 WNLVVSALN----------------------------------------------------------------------- 262 (600)
T ss_dssp SEEEEEEEC-----------------------------------------------------------------------
T ss_pred eeEEEeccc-----------------------------------------------------------------------
Confidence 677777632
Q ss_pred cCceEEEEecCCCccccccccCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCC
Q 004824 383 AGVLGAVFISNSALLEVYIRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNI 462 (728)
Q Consensus 383 ~Ga~g~i~~n~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~ 462 (728)
..+.++.||++||..
T Consensus 263 ------------------------------------------------------------~~g~~a~fS~~G~~v----- 277 (600)
T 2oxa_A 263 ------------------------------------------------------------ADGVRSSYSSVGSNI----- 277 (600)
T ss_dssp ------------------------------------------------------------TTSSBCTTCCBCTTE-----
T ss_pred ------------------------------------------------------------CCCCcCCcCCCCCCe-----
Confidence 234679999999976
Q ss_pred CCCcEEeCCCceeeccCCCCCcc---------------------ccccCcccCCceeeccccchhHHHHHHHHHHhhhCC
Q 004824 463 PKPDILAPGSLVLASWSPISSVA---------------------EVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHP 521 (728)
Q Consensus 463 lKPDI~APG~~I~sa~~~~~~~~---------------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p 521 (728)
||+|||++|.+..+...... ....+...+.|..++|||||||||||++|||+|++|
T Consensus 278 ---dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaALl~s~~P 354 (600)
T 2oxa_A 278 ---FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYP 354 (600)
T ss_dssp ---EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHST
T ss_pred ---EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHHHHHhCC
Confidence 99999999755443210000 000011123489999999999999999999999999
Q ss_pred CCCHHHHHHHHHhccccCCCCCCccc-------------------cCCCCCCCCCCCccCCCccCccccCCCCcee
Q 004824 522 DWSPAAIRSALVTTASPLDNTLSHIK-------------------DASNNNFPASPLDMGAGHINPNKALDPGLVY 578 (728)
Q Consensus 522 ~lsp~~ik~~L~~TA~~~~~~g~~~~-------------------d~~~~~~~~~~~~~G~G~in~~~Al~~~lv~ 578 (728)
+|+|++||++|++||+++...+.++. .... ......+.||||+||+.+|++....+
T Consensus 355 ~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~-~g~~~~~~~G~G~vda~~Av~~A~~~ 429 (600)
T 2oxa_A 355 DLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNA-AGMWFSPTYGFGLIDVNKALELAANH 429 (600)
T ss_dssp TSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECT-TSCEEBTTTBTCBCCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccC-CCccccccCCCchhhHHHHHHHHHhc
Confidence 99999999999999999865432211 0000 11223468999999999999854433
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.1e-45 Score=415.55 Aligned_cols=292 Identities=16% Similarity=0.132 Sum_probs=212.1
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCcc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKV 174 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 174 (728)
+..+|..+++|+||+|||||||||++||+|.+.-. ....++|.++. ..+.
T Consensus 27 ~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~-------------------------~~~~~d~~~~~-----~~p~ 76 (471)
T 1p8j_A 27 VKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD-------------------------PGASFDVNDQD-----PDPQ 76 (471)
T ss_dssp CHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC-------------------------GGGCEETTTTB-----SCCC
T ss_pred hHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC-------------------------ccCcccccCCC-----CCCC
Confidence 45699999999999999999999999999985300 00123333221 0111
Q ss_pred CCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCCCChHHHHHHHHHHHH-CCCcEEEe
Q 004824 175 RMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGVYSSDVVAAIDQALQ-DGVDVLSL 253 (728)
Q Consensus 175 ~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g~~~~~i~~ai~~a~~-~g~dVIN~ 253 (728)
+...+.|..+|||||||||||...++. | +.||||+|+|+.+|+++ +..+++++||+++++ ++++||||
T Consensus 77 ~~~~~~d~~gHGT~vAGiiaa~~~n~~---g-----~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~Vin~ 145 (471)
T 1p8j_A 77 PRYTQMNDNRHGTRCAGEVAAVANNGV---C-----GVGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIHIYSA 145 (471)
T ss_dssp CCCCTTCTTCHHHHHHHHHHCCSSSSS---S-----CCCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCCEEEE
T ss_pred CccCCCCCCCcHHHHHHHHHeeccCCC---C-----CEEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCeEEEe
Confidence 112456889999999999999754332 2 28999999999999985 446789999999999 99999999
Q ss_pred ccccCCCCCC---ChhhHHHHHHHHHH-----hCCcEEEEecCCCCCCCCc----cccCCCceEEeccccccceeeeEEE
Q 004824 254 SLGLSLNGIF---LEDDAIAVATFAAM-----EKGVLVVASAGNDGPSYWT----LINGAPWLLTVGAGTIDREFEGSLT 321 (728)
Q Consensus 254 SlG~~~~~~~---~~~~~~~~~~~~a~-----~~Gi~vV~AAGN~g~~~~~----~~~~ap~vitVgast~~~~~~~~~~ 321 (728)
|||.. .... .....+..++..+. .+|++||+||||+|..... ....++++|+|||++
T Consensus 146 S~G~~-~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~---------- 214 (471)
T 1p8j_A 146 SWGPE-DDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSAT---------- 214 (471)
T ss_dssp CCBSC-CSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEEC----------
T ss_pred ccCcC-CCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEeccc----------
Confidence 99984 1110 11223334444443 4799999999999976322 123458999999843
Q ss_pred cCCCcEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCcccccc
Q 004824 322 LGNGVQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYI 401 (728)
Q Consensus 322 ~~~g~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~ 401 (728)
T Consensus 215 -------------------------------------------------------------------------------- 214 (471)
T 1p8j_A 215 -------------------------------------------------------------------------------- 214 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCC
Q 004824 402 RSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPI 481 (728)
Q Consensus 402 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~ 481 (728)
..+.++.||++||..... .+|...+||..|+++....
T Consensus 215 -----------------------------------------~~g~~a~~S~~g~~~~~~--~~~~~~~~g~~i~st~~~~ 251 (471)
T 1p8j_A 215 -----------------------------------------QFGNVPWYSEACSSTLAT--TYSSGNQNEKQIVTTDLRQ 251 (471)
T ss_dssp -----------------------------------------TTSCCCTTCCBCTTCCEE--EECCCSTTSCCEEEEETTT
T ss_pred -----------------------------------------CCCCcccccCCCCcceEE--eCCCCCCCCCCEEEeeCCC
Confidence 123678999999987421 3445555567899987642
Q ss_pred CCccccccCcccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCcc
Q 004824 482 SSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIKDASNNNFPASPLDM 561 (728)
Q Consensus 482 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~d~~~~~~~~~~~~~ 561 (728)
+.|..++|||||||||||++|||+|++|+|++++||++|++||++............ ........|
T Consensus 252 ------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~--~g~~~~~~~ 317 (471)
T 1p8j_A 252 ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNG--VGRKVSHSY 317 (471)
T ss_dssp ------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECT--TSCEEBTTT
T ss_pred ------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecC--CCcccCCCC
Confidence 568999999999999999999999999999999999999999998765332221111 111234589
Q ss_pred CCCccCccccCCCC
Q 004824 562 GAGHINPNKALDPG 575 (728)
Q Consensus 562 G~G~in~~~Al~~~ 575 (728)
|||+||+.+|++..
T Consensus 318 G~G~vda~~Av~~a 331 (471)
T 1p8j_A 318 GYGLLDAGAMVALA 331 (471)
T ss_dssp BTCBCCHHHHHHHH
T ss_pred CCEEEcHhHHHHHh
Confidence 99999999999844
No 31
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=8e-45 Score=405.02 Aligned_cols=279 Identities=21% Similarity=0.206 Sum_probs=200.8
Q ss_pred CCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCccCCC
Q 004824 98 AWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKVRMN 177 (728)
Q Consensus 98 ~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 177 (728)
.|..+++|+||+|+|||||||++||+|.++- ....+.+....+ + .....
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~--------------------------~~~~~~~v~~~d---g--~~f~~ 66 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV--------------------------MVTDFENVPEED---G--TRFHR 66 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE--------------------------EEEEEECCCCCC-----------
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc--------------------------cccCcccccCCC---C--ccccC
Confidence 7888999999999999999999999998640 011111110000 0 00012
Q ss_pred CCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHC------CCcE
Q 004824 178 SPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQD------GVDV 250 (728)
Q Consensus 178 ~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~------g~dV 250 (728)
...|..||||||||||+|+. .||||+|+|+.+|+++..| ++.+++++||+|+++. +++|
T Consensus 67 ~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~V 132 (546)
T 2qtw_B 67 QASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLV 132 (546)
T ss_dssp -CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEE
T ss_pred CCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeE
Confidence 35678999999999999873 6999999999999998776 6788999999999984 8999
Q ss_pred EEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCC-ccccCCCceEEeccccccceeeeEEEcCCCcEEe
Q 004824 251 LSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYW-TLINGAPWLLTVGAGTIDREFEGSLTLGNGVQIN 329 (728)
Q Consensus 251 IN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~ap~vitVgast~~~~~~~~~~~~~g~~~~ 329 (728)
||||||. . +...+..++..+.++|++||+||||+|.... ..+...|++|+|||++.+...
T Consensus 133 INmSlGg--~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~------------- 193 (546)
T 2qtw_B 133 VLLPLAG--G----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------------- 193 (546)
T ss_dssp EEECEEE--E----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB-------------
T ss_pred EEecCCC--C----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc-------------
Confidence 9999998 2 2456777888899999999999999997643 446788999999995422110
Q ss_pred eeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEEE
Q 004824 330 FKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAAF 409 (728)
Q Consensus 330 g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~~ 409 (728)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCcccccc
Q 004824 410 INVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQS 489 (728)
Q Consensus 410 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~ 489 (728)
...-..||++|| ||||+|||++|+++++..
T Consensus 194 ----------------------------------a~~s~~fSn~G~--------~vDI~APG~~I~St~~~~-------- 223 (546)
T 2qtw_B 194 ----------------------------------VTLGTLGTNFGR--------CVDLFAPGEDIIGASSDC-------- 223 (546)
T ss_dssp ----------------------------------CEETTEECCBST--------TCCEEEECSSEEEECTTS--------
T ss_pred ----------------------------------ccccCCcCCCCC--------cceEEecCccEEeeccCC--------
Confidence 000123899996 569999999999998753
Q ss_pred CcccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCCCCccc-------cCCCCCCCCCCCccC
Q 004824 490 GLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNTLSHIK-------DASNNNFPASPLDMG 562 (728)
Q Consensus 490 ~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~g~~~~-------d~~~~~~~~~~~~~G 562 (728)
.+.|..++|||||||||||++|||+|++|+|+|++||++|++||.+.......+. .+.....+...+.+|
T Consensus 224 ---~~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l~~~~~~~~~~G 300 (546)
T 2qtw_B 224 ---STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAG 300 (546)
T ss_dssp ---TTCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEECCCCCTTCC--
T ss_pred ---CCcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCccccCCCCccchhccCCcccccC
Confidence 2578999999999999999999999999999999999999999987543221110 000001122345678
Q ss_pred CCc--cCccccCC
Q 004824 563 AGH--INPNKALD 573 (728)
Q Consensus 563 ~G~--in~~~Al~ 573 (728)
+|+ .++..+..
T Consensus 301 ~~l~~~~~w~a~s 313 (546)
T 2qtw_B 301 WQLFCRTVWSAHS 313 (546)
T ss_dssp CCCEEEEEECCCC
T ss_pred CCcchhchhccCC
Confidence 888 77666654
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=7.4e-45 Score=381.81 Aligned_cols=229 Identities=30% Similarity=0.407 Sum_probs=195.3
Q ss_pred CCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCccCCC
Q 004824 98 AWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKVRMN 177 (728)
Q Consensus 98 ~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 177 (728)
+|... +|+||+|||||||||++||+|.++ +...++|..+
T Consensus 25 ~~~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~------------- 63 (279)
T 3f7m_A 25 AYDTS-AGAGACVYVIDTGVEDTHPDFEGR---------------------------AKQIKSYAST------------- 63 (279)
T ss_dssp EECTT-TTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEECSSS-------------
T ss_pred eecCC-CCCCCEEEEEcCCCCCCChhhccc---------------------------cccccCCCCC-------------
Confidence 56665 899999999999999999999753 3344444322
Q ss_pred CCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHHHHHHHCC-------Cc
Q 004824 178 SPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAIDQALQDG-------VD 249 (728)
Q Consensus 178 ~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai~~a~~~g-------~d 249 (728)
..|..||||||||||+|+. .||||+|+|+.+|+++..+ +..+++++||+|+++++ ++
T Consensus 64 -~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~ 128 (279)
T 3f7m_A 64 -ARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRT 128 (279)
T ss_dssp -SSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEE
T ss_pred -CCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCe
Confidence 2378899999999999863 6999999999999998776 78889999999999876 89
Q ss_pred EEEeccccCCCCCCChhhHHHHHHHHHHhCCcEEEEecCCCCCCCCc-cccCCCceEEeccccccceeeeEEEcCCCcEE
Q 004824 250 VLSLSLGLSLNGIFLEDDAIAVATFAAMEKGVLVVASAGNDGPSYWT-LINGAPWLLTVGAGTIDREFEGSLTLGNGVQI 328 (728)
Q Consensus 250 VIN~SlG~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~ap~vitVgast~~~~~~~~~~~~~g~~~ 328 (728)
|||||||. . ....+..++..+.++|++||+||||+|..... .+...|++|+|||.+
T Consensus 129 Vin~S~g~--~----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~----------------- 185 (279)
T 3f7m_A 129 VASMSLGG--G----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATD----------------- 185 (279)
T ss_dssp EEEECCCE--E----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC-----------------
T ss_pred EEEeCCCc--C----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecC-----------------
Confidence 99999998 2 45677778889999999999999999976543 367789999999843
Q ss_pred eeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccccCccEE
Q 004824 329 NFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIRSSFPAA 408 (728)
Q Consensus 329 ~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~p~~ 408 (728)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 3f7m_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCCCCCccccc
Q 004824 409 FINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSPISSVAEVQ 488 (728)
Q Consensus 409 ~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~ 488 (728)
..+.++.||++||. |||+|||.+|+++++.
T Consensus 186 ----------------------------------~~~~~~~~S~~g~~--------~di~ApG~~i~s~~~~-------- 215 (279)
T 3f7m_A 186 ----------------------------------SNDVRSTFSNYGRV--------VDIFAPGTSITSTWIG-------- 215 (279)
T ss_dssp ----------------------------------TTSBBCTTCCBSTT--------CCEEEECSSEEEECGG--------
T ss_pred ----------------------------------CCCCCCCCCCCCCC--------CeEEECCCCeEeecCC--------
Confidence 22367899999984 4999999999999875
Q ss_pred cCcccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCC
Q 004824 489 SGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDN 541 (728)
Q Consensus 489 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~ 541 (728)
+.|..++|||||||+|||++|||+|++|. ++++||++|++||++...
T Consensus 216 -----~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~~ 262 (279)
T 3f7m_A 216 -----GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNVL 262 (279)
T ss_dssp -----GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESCC
T ss_pred -----CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccccc
Confidence 57899999999999999999999999999 999999999999998644
No 33
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=1.3e-44 Score=409.57 Aligned_cols=285 Identities=21% Similarity=0.212 Sum_probs=212.6
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCcc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKV 174 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 174 (728)
+..+|..+++|+||+|||||||||++||+|.+.- + ..+.++|.++. .
T Consensus 43 ~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~------------------~~~~~d~~~~~--------~ 89 (503)
T 2id4_A 43 VLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C------------------AEGSWDFNDNT--------N 89 (503)
T ss_dssp CHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C------------------GGGCEETTTTB--------S
T ss_pred hHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c------------------ccCcccCCCCC--------C
Confidence 3568999999999999999999999999998640 0 01223343321 0
Q ss_pred CCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCCCChHHHHHHHHHHHHCCCcEEEec
Q 004824 175 RMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHGVYSSDVVAAIDQALQDGVDVLSLS 254 (728)
Q Consensus 175 ~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~S 254 (728)
......|..||||||||||||...++. | +.||||+|+|+.+|+++.. ++..++++||+|+++++ +|||||
T Consensus 90 ~~~p~~d~~gHGT~vAGiiaa~~~n~~---~-----~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin~S 159 (503)
T 2id4_A 90 LPKPRLSDDYHGTRCAGEIAAKKGNNF---C-----GVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYSCS 159 (503)
T ss_dssp CCCCCSTTTTHHHHHHHHHHCCSSSSS---S-----CCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEEEC
T ss_pred CCCCCCCCCChHHHHHHHHHhccCCCC---C-----cEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEEeC
Confidence 111235788999999999999764332 2 2799999999999998643 67888999999999998 999999
Q ss_pred cccCCCCC---CChhhHHHHHHHHHH-----hCCcEEEEecCCCCCCCC--ccc--cCCCceEEeccccccceeeeEEEc
Q 004824 255 LGLSLNGI---FLEDDAIAVATFAAM-----EKGVLVVASAGNDGPSYW--TLI--NGAPWLLTVGAGTIDREFEGSLTL 322 (728)
Q Consensus 255 lG~~~~~~---~~~~~~~~~~~~~a~-----~~Gi~vV~AAGN~g~~~~--~~~--~~ap~vitVgast~~~~~~~~~~~ 322 (728)
||.. ... ......+..++..+. .+|++||+||||+|.... .++ ..++++|+|||++
T Consensus 160 ~G~~-~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~----------- 227 (503)
T 2id4_A 160 WGPA-DDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAID----------- 227 (503)
T ss_dssp EESC-CSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEEC-----------
T ss_pred CCcC-CCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeC-----------
Confidence 9984 111 112234555555554 489999999999997542 222 2467899999843
Q ss_pred CCCcEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHcCceEEEEecCCCccccccc
Q 004824 323 GNGVQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAAGVLGAVFISNSALLEVYIR 402 (728)
Q Consensus 323 ~~g~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~ 402 (728)
T Consensus 228 -------------------------------------------------------------------------------- 227 (503)
T 2id4_A 228 -------------------------------------------------------------------------------- 227 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCCCCcEEe----CCCceeecc
Q 004824 403 SSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIPKPDILA----PGSLVLASW 478 (728)
Q Consensus 403 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~A----PG~~I~sa~ 478 (728)
..+.+++||++||.. |++| ||..|+++.
T Consensus 228 ----------------------------------------~~~~~a~~S~~g~~~--------~~~a~~~gpG~~I~st~ 259 (503)
T 2id4_A 228 ----------------------------------------HKDLHPPYSEGCSAV--------MAVTYSSGSGEYIHSSD 259 (503)
T ss_dssp ----------------------------------------TTSCCCTTCCCCTTE--------EEEEECSBTTBCEEEEC
T ss_pred ----------------------------------------CCCCcCCcCCCCCcc--------eEeecCCCCCCceEeec
Confidence 123578999999976 8887 899999985
Q ss_pred CCCCCccccccCcccCCceeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHHHHhccccCCCC-CCccccCCCCCCCCC
Q 004824 479 SPISSVAEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSALVTTASPLDNT-LSHIKDASNNNFPAS 557 (728)
Q Consensus 479 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA~~~~~~-g~~~~d~~~~~~~~~ 557 (728)
... +.|..++|||||||||||++|||+|++|+|++++||++|++||+++... ........ .....
T Consensus 260 ~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~--~g~~~ 325 (503)
T 2id4_A 260 ING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSA--MGKKY 325 (503)
T ss_dssp STT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECS--SSSEE
T ss_pred CCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecC--CCCcc
Confidence 432 6799999999999999999999999999999999999999999987643 11111110 11123
Q ss_pred CCccCCCccCccccCCCCc
Q 004824 558 PLDMGAGHINPNKALDPGL 576 (728)
Q Consensus 558 ~~~~G~G~in~~~Al~~~l 576 (728)
...||+|+||+.+|++...
T Consensus 326 ~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 326 SHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp BTTTBTCBCCHHHHHHHHT
T ss_pred CcccCCcEecHHHHHHHHh
Confidence 4589999999999998443
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1e-42 Score=404.01 Aligned_cols=298 Identities=25% Similarity=0.250 Sum_probs=199.5
Q ss_pred CCCCCCCCCCCCCcEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCccCcccCCceeeeeeeccccccccCCCCcc
Q 004824 95 LSGAWPASNYGKGVIIGLVDTGIWPESQSFSDEGMAKVPPRWKGECMSGVQFNSSLCNKKLIGARFFNKGLIANNPKLKV 174 (728)
Q Consensus 95 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 174 (728)
+..+|.++++|+||+|||||||||++||+|.++ ...+.++|..+.+
T Consensus 59 v~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n--------------------------~~~~~~~~~~~~~-------- 104 (600)
T 3hjr_A 59 LWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN--------------------------VRPGSKNVVTGSD-------- 104 (600)
T ss_dssp CHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG--------------------------BCSCCBCTTTSSS--------
T ss_pred HHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc--------------------------cccCcceeecCCC--------
Confidence 345899999999999999999999999999853 0112223332211
Q ss_pred CCCCCCCCCCChhhHHHHhccCCcCCCCcccccCcccccccCCCeEEEEEeeeCCC-CChHHHHHHH-HHHHHCCCcEEE
Q 004824 175 RMNSPRDGSGHGTHTSSIAAGNYVKGSSYFGYATGIARGIAPRACVAMYKAIWRHG-VYSSDVVAAI-DQALQDGVDVLS 252 (728)
Q Consensus 175 ~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~g~~~GvAP~A~i~~~kv~~~~g-~~~~~i~~ai-~~a~~~g~dVIN 252 (728)
+.....|..+|||||||||||.. +..|. .||||+|+|+.+|++++.+ +..++++.|+ +++..++++|||
T Consensus 105 dp~p~~~~~gHGThVAGiIAa~~----n~~g~-----~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n 175 (600)
T 3hjr_A 105 DPTPTDPDTAHGTSVSGIIAAVD----NAIGT-----KGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFN 175 (600)
T ss_dssp CCCCCSTTCCHHHHHHHHHHCCS----SSSSC-----CCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEE
T ss_pred CCCCCCCCCChHHHHHHHHhEeC----CCCCc-----EEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEe
Confidence 11223457899999999999863 22233 7999999999999998766 6677777766 678889999999
Q ss_pred eccccCCCCCC-----ChhhHHHHHHHHH--HhCCcEEEEecCCCCCCCCc----------------------cccCCCc
Q 004824 253 LSLGLSLNGIF-----LEDDAIAVATFAA--MEKGVLVVASAGNDGPSYWT----------------------LINGAPW 303 (728)
Q Consensus 253 ~SlG~~~~~~~-----~~~~~~~~~~~~a--~~~Gi~vV~AAGN~g~~~~~----------------------~~~~ap~ 303 (728)
+|||.. .... .....+..++..+ ..+|+++|+||||.+..... .....++
T Consensus 176 ~S~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~~~~~ 254 (600)
T 3hjr_A 176 QSYGMS-VVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFW 254 (600)
T ss_dssp ECCCCC-CSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGGGGSSS
T ss_pred cccCcc-ccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccCccccCc
Confidence 999974 1111 1122222222222 36899999999997643110 0111223
Q ss_pred eEEeccccccceeeeEEEcCCCcEEeeeecCCCCCCCCeeeEEEccCCCCCccCccCcceEEEEccCCchhHHHHHHHHc
Q 004824 304 LLTVGAGTIDREFEGSLTLGNGVQINFKSLYPGNSSPSQVSLAFMDACDSVTELKKVINSIVVCREDSSISSQIDNAVAA 383 (728)
Q Consensus 304 vitVgast~~~~~~~~~~~~~g~~~~g~s~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~g~~~~~~~~~~~~~~ 383 (728)
+|+|||
T Consensus 255 ~IsVgA-------------------------------------------------------------------------- 260 (600)
T 3hjr_A 255 NLVVSA-------------------------------------------------------------------------- 260 (600)
T ss_dssp EEEEEE--------------------------------------------------------------------------
T ss_pred ceEEee--------------------------------------------------------------------------
Confidence 333333
Q ss_pred CceEEEEecCCCccccccccCccEEEeecccHHHHHHHHHhCCCCeEEEEeeeeEecccCCCccccccCCCCCCCCCCCC
Q 004824 384 GVLGAVFISNSALLEVYIRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRKTVIGTKPAPMVDSYSSRGPFLSCPNIP 463 (728)
Q Consensus 384 Ga~g~i~~n~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~l 463 (728)
....+.++.||++|+..
T Consensus 261 ---------------------------------------------------------~~~~g~~a~yS~~G~~v------ 277 (600)
T 3hjr_A 261 ---------------------------------------------------------LNADGVRSSYSSVGSNI------ 277 (600)
T ss_dssp ---------------------------------------------------------ECTTSSBCTTCCBCTTC------
T ss_pred ---------------------------------------------------------ecCCCCEeecccCCcce------
Confidence 22345789999999876
Q ss_pred CCcEEeCCCceee--------ccCCCCCc-------------cccccCcccCCceeeccccchhHHHHHHHHHHhhhCCC
Q 004824 464 KPDILAPGSLVLA--------SWSPISSV-------------AEVQSGLLYSNFNLMSGTSMATPHVAGVAGLLKAAHPD 522 (728)
Q Consensus 464 KPDI~APG~~I~s--------a~~~~~~~-------------~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~ 522 (728)
+++|||..+.. ..++.... .........+.|..++|||||||||||++|||+|++|+
T Consensus 278 --~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~ 355 (600)
T 3hjr_A 278 --FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPD 355 (600)
T ss_dssp --CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTT
T ss_pred --eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCC
Confidence 88899876321 11110000 00001122356889999999999999999999999999
Q ss_pred CCHHHHHHHHHhccccCCCCCCccccC---------------C---CCCCCCCCCccCCCccCccccCCCC
Q 004824 523 WSPAAIRSALVTTASPLDNTLSHIKDA---------------S---NNNFPASPLDMGAGHINPNKALDPG 575 (728)
Q Consensus 523 lsp~~ik~~L~~TA~~~~~~g~~~~d~---------------~---~~~~~~~~~~~G~G~in~~~Al~~~ 575 (728)
|+++|||++|++||++++....|.... . ..........||||+||+.+|++.+
T Consensus 356 lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~A 426 (600)
T 3hjr_A 356 LSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELA 426 (600)
T ss_dssp SCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHH
T ss_pred CCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHHh
Confidence 999999999999999988765542110 0 0011112347999999999998743
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.90 E-value=1.3e-24 Score=246.70 Aligned_cols=97 Identities=27% Similarity=0.331 Sum_probs=78.2
Q ss_pred cccccCCCeEEEEEeeeCCCCChHHHHHHHHHHHH---CCCcEEEeccccCCCCCC---ChhhHHHHHHHHHHhCCcEEE
Q 004824 211 ARGIAPRACVAMYKAIWRHGVYSSDVVAAIDQALQ---DGVDVLSLSLGLSLNGIF---LEDDAIAVATFAAMEKGVLVV 284 (728)
Q Consensus 211 ~~GvAP~A~i~~~kv~~~~g~~~~~i~~ai~~a~~---~g~dVIN~SlG~~~~~~~---~~~~~~~~~~~~a~~~Gi~vV 284 (728)
+.||||+|+|+.|++. ...++++++|+||++ ++++|||+|||.. ... .+...+..++.+|..+||+||
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~--e~~~~~~~~~~~~~~~~~a~~~Gi~vv 347 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGP--EDSWAPASIAAMNRAFLDAAALGVTVL 347 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEE--GGGSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCC--cccCCHHHHHHHHHHHHHHHhCCeEEE
Confidence 4899999999999973 356789999999998 7999999999984 221 123466777778889999999
Q ss_pred EecCCCCCCC--------CccccCCCceEEecccccc
Q 004824 285 ASAGNDGPSY--------WTLINGAPWLLTVGAGTID 313 (728)
Q Consensus 285 ~AAGN~g~~~--------~~~~~~ap~vitVgast~~ 313 (728)
+||||+|... ..++..+|||++||+++..
T Consensus 348 ~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~ 384 (552)
T 1t1e_A 348 AAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLV 384 (552)
T ss_dssp EECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEE
T ss_pred EecCCCCCCCCCCCCcccccCcccCCCEEEEeccccc
Confidence 9999999653 3456788999999997643
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=2.2e-21 Score=209.90 Aligned_cols=101 Identities=17% Similarity=0.158 Sum_probs=81.0
Q ss_pred ccccCCCeEEEEEeeeCCCCChHHHHHHHHHHHH-CCCcEEEeccccCCCC---CCChhhHHHHHHHHHHhCCcEEEEec
Q 004824 212 RGIAPRACVAMYKAIWRHGVYSSDVVAAIDQALQ-DGVDVLSLSLGLSLNG---IFLEDDAIAVATFAAMEKGVLVVASA 287 (728)
Q Consensus 212 ~GvAP~A~i~~~kv~~~~g~~~~~i~~ai~~a~~-~g~dVIN~SlG~~~~~---~~~~~~~~~~~~~~a~~~Gi~vV~AA 287 (728)
..+||+|+++.|++.+..++..++++.+|+||++ ++++|||||||.. .. ...+...+..++.+|..+||+||+||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~-e~~~~~~~~~~~~~~~~~~a~~~Gitvv~As 168 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWC-EADANADGTLQAEDRIFATAAAQGQTFSVSS 168 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEE-HHHHHHTTHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCC-CCCCchHHHHHHHHHHHHHHHhCCcEEEEEE
Confidence 4579999999999987655778899999999998 8999999999983 10 11233566777778889999999999
Q ss_pred CCCCCCCC-------------ccccCCCceEEecccccc
Q 004824 288 GNDGPSYW-------------TLINGAPWLLTVGAGTID 313 (728)
Q Consensus 288 GN~g~~~~-------------~~~~~ap~vitVgast~~ 313 (728)
||+|...+ ..+..+|||++||+++..
T Consensus 169 Gd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 169 GDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp CSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 99997532 455678999999997654
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.94 E-value=3.9e-10 Score=127.03 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=64.0
Q ss_pred ccccCCCeEEEEEeeeCCCCChHHHHHHHHHHHH--CCCcEEEeccccCCCC-CCChhhHHHHHHHHHHhCCcEEEEecC
Q 004824 212 RGIAPRACVAMYKAIWRHGVYSSDVVAAIDQALQ--DGVDVLSLSLGLSLNG-IFLEDDAIAVATFAAMEKGVLVVASAG 288 (728)
Q Consensus 212 ~GvAP~A~i~~~kv~~~~g~~~~~i~~ai~~a~~--~g~dVIN~SlG~~~~~-~~~~~~~~~~~~~~a~~~Gi~vV~AAG 288 (728)
.+++++..++.|-.... ....+.++..+++... +-++|||+|||..... ...+...+...+.++..+||.|++|+|
T Consensus 262 ~a~~~~i~~~~~~~~g~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASG 340 (544)
T 3edy_A 262 MSAGANISTWVYSSPGR-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASG 340 (544)
T ss_dssp HHHSTTSEEEEECCCSC-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hccCCCceEEEEecCCc-ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecC
Confidence 45555666555433111 1123345555554442 4589999999994111 112334566667788899999999999
Q ss_pred CCCCCC----------CccccCCCceEEeccccc
Q 004824 289 NDGPSY----------WTLINGAPWLLTVGAGTI 312 (728)
Q Consensus 289 N~g~~~----------~~~~~~ap~vitVgast~ 312 (728)
|+|... ...+..+|||++||+++.
T Consensus 341 D~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 341 DSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp SSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 999753 245678899999999764
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.59 E-value=1.8e-08 Score=89.71 Aligned_cols=64 Identities=14% Similarity=0.074 Sum_probs=54.9
Q ss_pred CCccccHHHHHHHHhccccccccccccccCCcccEEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEecCCcccc
Q 004824 7 PKAYSSLYTWYLFMLCSVSESSKATATSSTISSKLVYTYANSIHGFSATLTVSELETLKKLPGYISSTPDRPLAV 81 (728)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~ngfs~~l~~~~~~~L~~~p~V~~V~~~~~~~~ 81 (728)
+....+|++|+.+++.+.. .+.+++|+|++.|+||+++|+++++++|+++|+|.+|++++.++.
T Consensus 50 ~~~~~~h~~~l~s~~~~~~-----------~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 50 LSQSERTARRLQAQAARRG-----------YLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp HHHHHHHHHHHHHHHHHTT-----------CCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhhcc-----------cCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 3455689999999986521 247899999999999999999999999999999999999987654
No 39
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.31 E-value=2e-06 Score=83.16 Aligned_cols=88 Identities=18% Similarity=0.255 Sum_probs=70.0
Q ss_pred cCCCCCccCcc--------CcceEEEEc-cC-CchhHHHHHHHHcCceEEEEecCCC-c---ccccc--ccCccEEEeec
Q 004824 349 DACDSVTELKK--------VINSIVVCR-ED-SSISSQIDNAVAAGVLGAVFISNSA-L---LEVYI--RSSFPAAFINV 412 (728)
Q Consensus 349 ~~c~~~~~~~~--------~~gkiv~~~-g~-~~~~~~~~~~~~~Ga~g~i~~n~~~-~---~~~~~--~~~~p~~~i~~ 412 (728)
..|.+...... .+|||+|++ |. |.|.+|..+++++||.++|++|+.. . ..+.. ...+|+++|+.
T Consensus 84 ~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~Is~ 163 (194)
T 3icu_A 84 NACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGN 163 (194)
T ss_dssp TCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEECH
T ss_pred CCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEECH
Confidence 58987664322 468999999 99 9999999999999999999999852 2 22221 22459999999
Q ss_pred ccHHHHHHHHHhCCCCeEEEEeee
Q 004824 413 NDGQTIIDYIKKCDNPTGSLQFRK 436 (728)
Q Consensus 413 ~~g~~l~~~~~~~~~~~~~i~~~~ 436 (728)
.+|+.|++.+.++...+++|.+..
T Consensus 164 ~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 164 LKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEEECCC
Confidence 999999999999888777777654
No 40
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.20 E-value=1.6e-06 Score=72.05 Aligned_cols=47 Identities=26% Similarity=0.268 Sum_probs=43.2
Q ss_pred cccEEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEecCCcccccCCC
Q 004824 38 SSKLVYTYANSIHGFSATLTVSELETLKKLPGYISSTPDRPLAVHTTH 85 (728)
Q Consensus 38 ~~~i~~~y~~~~ngfs~~l~~~~~~~L~~~p~V~~V~~~~~~~~~~~~ 85 (728)
+.+++|+|++ |+||+++++++++++|+++|+|.+|+++..++++++.
T Consensus 33 g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 33 GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALSAT 79 (80)
T ss_dssp TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECCC-
T ss_pred CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEeeec
Confidence 4789999998 9999999999999999999999999999999887654
No 41
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=97.99 E-value=3e-06 Score=76.30 Aligned_cols=44 Identities=20% Similarity=0.240 Sum_probs=40.9
Q ss_pred cccEEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEecCCcccc
Q 004824 38 SSKLVYTYANSIHGFSATLTVSELETLKKLPGYISSTPDRPLAV 81 (728)
Q Consensus 38 ~~~i~~~y~~~~ngfs~~l~~~~~~~L~~~p~V~~V~~~~~~~~ 81 (728)
+.+++|+|++.||||+++++++++++|+++|+|.+|++++.++.
T Consensus 80 g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 80 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 47899999999999999999999999999999999999987653
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=97.63 E-value=4.9e-05 Score=62.22 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=38.8
Q ss_pred ccEEEEe-cceeeEEEEEeCHHHHHHHhcC--CCeEEEecCCcccc
Q 004824 39 SKLVYTY-ANSIHGFSATLTVSELETLKKL--PGYISSTPDRPLAV 81 (728)
Q Consensus 39 ~~i~~~y-~~~~ngfs~~l~~~~~~~L~~~--p~V~~V~~~~~~~~ 81 (728)
.++.|+| ...|+||+++++++.+++|+++ |.|.+||+++.++.
T Consensus 30 g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 30 GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 5788999 4799999999999999999999 89999999987653
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=96.68 E-value=0.0015 Score=51.58 Aligned_cols=44 Identities=23% Similarity=0.382 Sum_probs=40.3
Q ss_pred CCcccEEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEecCCccc
Q 004824 36 TISSKLVYTYANSIHGFSATLTVSELETLKKLPGYISSTPDRPLA 80 (728)
Q Consensus 36 ~~~~~i~~~y~~~~ngfs~~l~~~~~~~L~~~p~V~~V~~~~~~~ 80 (728)
..|.++.|+|. .+++++++|+++.++.|+++|+|++|+++...+
T Consensus 20 ~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 20 GIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp GGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred HCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 45899999998 799999999999999999999999999997654
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.66 E-value=0.0065 Score=66.55 Aligned_cols=83 Identities=14% Similarity=0.214 Sum_probs=65.7
Q ss_pred CeeeEEEccCCCCCccCc-cCcceEEEEc-cCCchhHHHHHHHHcCceEEEEecCCCc-cc-cc---cccCccEEEeecc
Q 004824 341 SQVSLAFMDACDSVTELK-KVINSIVVCR-EDSSISSQIDNAVAAGVLGAVFISNSAL-LE-VY---IRSSFPAAFINVN 413 (728)
Q Consensus 341 ~~~~lv~~~~c~~~~~~~-~~~gkiv~~~-g~~~~~~~~~~~~~~Ga~g~i~~n~~~~-~~-~~---~~~~~p~~~i~~~ 413 (728)
..-++++...+.+.++.. +++||||+++ |.|.+.+|..+++++||.|+|++++... .. .. ....+|++.++..
T Consensus 93 v~a~lv~~~~G~~~D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~ 172 (421)
T 2ek8_A 93 VTAELVYVGLGTTADVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQ 172 (421)
T ss_dssp EEEEEEECTTCCTTTTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHH
T ss_pred cceEEEECCCCChhhcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHH
Confidence 355778876665555555 4999999999 9999999999999999999999998654 11 11 1234599999999
Q ss_pred cHHHHHHHHH
Q 004824 414 DGQTIIDYIK 423 (728)
Q Consensus 414 ~g~~l~~~~~ 423 (728)
+++.|++.+.
T Consensus 173 ~a~~L~~~l~ 182 (421)
T 2ek8_A 173 EGDALAANLR 182 (421)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999884
No 45
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.85 E-value=0.0073 Score=69.26 Aligned_cols=82 Identities=13% Similarity=0.155 Sum_probs=63.5
Q ss_pred eeeEEEccCCCCCccCc---cCcceEEEEc-cCCchhHHHHHHHHcCceEEEEecCCCcc-c------------------
Q 004824 342 QVSLAFMDACDSVTELK---KVINSIVVCR-EDSSISSQIDNAVAAGVLGAVFISNSALL-E------------------ 398 (728)
Q Consensus 342 ~~~lv~~~~c~~~~~~~---~~~gkiv~~~-g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~-~------------------ 398 (728)
+.++||...|...++.. +++||||+++ |.|.+.+|..+|+++||.|+|++++.... .
T Consensus 109 ~g~lV~vg~G~~~D~~~l~vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp 188 (640)
T 3kas_A 109 TGKLVHANFGTKKDFEDLYTPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDP 188 (640)
T ss_dssp EECEEECTTCCHHHHHTCSSCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCS
T ss_pred EEEEEEecCCChhhHHHhhcccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCC
Confidence 57888876665555544 4999999999 99999999999999999999999975320 0
Q ss_pred -cc----------------cccCccEEEeecccHHHHHHHHH
Q 004824 399 -VY----------------IRSSFPAAFINVNDGQTIIDYIK 423 (728)
Q Consensus 399 -~~----------------~~~~~p~~~i~~~~g~~l~~~~~ 423 (728)
.+ ....+|++.|+..+++.|++.+.
T Consensus 189 ~tpg~ps~~~~~~~~~~~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 189 YTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCC---CCCCCCSSCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCcccccccccccccccCCCCCCEEecCHHHHHHHHHHcc
Confidence 00 01245999999999999987654
No 46
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=95.13 E-value=0.015 Score=67.32 Aligned_cols=53 Identities=19% Similarity=0.350 Sum_probs=44.5
Q ss_pred CeeeEEEccCCCCCccC------c-cCcceEEEEc-cCCchhHHHHHHHHcCceEEEEecC
Q 004824 341 SQVSLAFMDACDSVTEL------K-KVINSIVVCR-EDSSISSQIDNAVAAGVLGAVFISN 393 (728)
Q Consensus 341 ~~~~lv~~~~c~~~~~~------~-~~~gkiv~~~-g~~~~~~~~~~~~~~Ga~g~i~~n~ 393 (728)
.+-++||...+...++. . +++|||+|++ |.|.+.+|..+|+++||.|+|++++
T Consensus 127 v~g~lV~v~~G~~~Df~~L~~~~~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~d 187 (707)
T 3fed_A 127 PEGDLVYVNYARTEDFFKLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSD 187 (707)
T ss_dssp CEECEEECTTCCHHHHHHHHHTSCCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECC
T ss_pred eEEEEEEecCCchhhHHHHHhccCCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcC
Confidence 46688987666555542 3 3999999999 9999999999999999999999986
No 47
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.63 E-value=0.11 Score=46.14 Aligned_cols=74 Identities=14% Similarity=0.044 Sum_probs=53.2
Q ss_pred eeEEEEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEecccCCCceEEEEEEEEeCCCCcEEE
Q 004824 636 VVKEFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGPKLLEKDVVYGSISWVDDDGRYEVR 715 (728)
Q Consensus 636 ~~~t~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G~i~~~~~~~~~~v~ 715 (728)
.+.+.+..|+|+|+.+..|+.... .- .+++|...++. +|+++.++|+|.+.. .+.+.+.|.+.-+ +...+.
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~--~~--F~i~P~~g~L~-pg~~~~i~V~F~P~~---~g~~~~~l~v~~~-~g~~~~ 111 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTC--RP--FSIEPAIGTLN-VGESMQLEVEFEPQS---VGDHSGRLIVCYD-TGEKVF 111 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECC--TT--EEEESSEEEEC-TTCEEEEEEEECCSS---SBCCCCBCEEEES-SSCEEC
T ss_pred CeEEEEEEEEECCCCCEEEEEecC--CC--eEEECCcCEEC-CCCEEEEEEEEEcCC---CccEEEEEEEEEC-CCCEEE
Confidence 356666689999998888876653 33 55689999998 899999999999842 3456666666543 335555
Q ss_pred eEE
Q 004824 716 SPI 718 (728)
Q Consensus 716 ~P~ 718 (728)
+++
T Consensus 112 v~L 114 (122)
T 2ys4_A 112 VSL 114 (122)
T ss_dssp CEE
T ss_pred EEE
Confidence 544
No 48
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=94.48 E-value=0.1 Score=57.36 Aligned_cols=95 Identities=18% Similarity=0.153 Sum_probs=64.4
Q ss_pred CeeeEEEcc---CCCCCccCccCcceEEEEc-cCCc---------hhHH----HHHHHHcCceEEEEecCCCc-c-----
Q 004824 341 SQVSLAFMD---ACDSVTELKKVINSIVVCR-EDSS---------ISSQ----IDNAVAAGVLGAVFISNSAL-L----- 397 (728)
Q Consensus 341 ~~~~lv~~~---~c~~~~~~~~~~gkiv~~~-g~~~---------~~~~----~~~~~~~Ga~g~i~~n~~~~-~----- 397 (728)
-+-++|+.. .|.. ....+++||||+++ +.|. +..| ..++.++||+|+|++|+... .
T Consensus 106 vta~lV~v~~~~~~~~-~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~t 184 (444)
T 3iib_A 106 LSATIVRFDTLQDLQN-AEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHT 184 (444)
T ss_dssp EEEEEEEESSHHHHHT-SCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCC
T ss_pred eEEEEEecCCHHHHhh-ccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccC
Confidence 466777742 2221 11124999999999 7773 3444 35799999999999997543 1
Q ss_pred -ccc---cccCccEEEeecccHHHHHHHHHhCCCCeEEEEeee
Q 004824 398 -EVY---IRSSFPAAFINVNDGQTIIDYIKKCDNPTGSLQFRK 436 (728)
Q Consensus 398 -~~~---~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~ 436 (728)
.+. ....+|++.|+..+++.|++.+..+...++++....
T Consensus 185 g~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~~ 227 (444)
T 3iib_A 185 GMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLELGS 227 (444)
T ss_dssp CBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEEE
T ss_pred CccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEee
Confidence 111 123459999999999999999987766666665543
No 49
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.45 E-value=0.3 Score=59.75 Aligned_cols=24 Identities=25% Similarity=0.529 Sum_probs=22.6
Q ss_pred CCCCCCcEEEEEccCCCCCCCCCC
Q 004824 102 SNYGKGVIIGLVDTGIWPESQSFS 125 (728)
Q Consensus 102 ~~~G~Gv~VgVIDtGid~~Hp~f~ 125 (728)
.+.|+||+|||+|||||+.+|-|.
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 678999999999999999999986
No 50
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.47 E-value=4.5 Score=34.58 Aligned_cols=68 Identities=7% Similarity=0.036 Sum_probs=47.6
Q ss_pred eEEEEEEEEeCCCCCeEEEEEEec-CCCeEEEEEeceEEEeccCeeEEEEEEEEecccCCCceEEEEEEEEeC
Q 004824 637 VKEFWRTVTNAEEVGTAYTAKLTG-IDGLKVYVEPRRLVFKQKYEKQSYKLTLEGPKLLEKDVVYGSISWVDD 708 (728)
Q Consensus 637 ~~t~~rtvtn~g~~~~ty~~~~~~-~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G~i~~~~~ 708 (728)
..+.+.+++|.|+.+..|+..... +.+...+++|..-.+. +|++++++|+|.+.. . +.+.=.|.+.-.
T Consensus 27 ~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~-pg~~~~i~V~f~~~~-~--g~f~~~i~v~~~ 95 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIE-PSGVQAIQISFSSII-L--GNFEEEFLVNVN 95 (112)
T ss_dssp CEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEEC-TTBCCEEEEEECCCC-C--EEEEEEECEEES
T ss_pred EEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEEC-CCCEEEEEEEEECCC-c--ceEEEEEEEEEC
Confidence 455566899999999999883211 1223466789998888 899999999999842 2 334445666653
No 51
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=80.80 E-value=1 Score=49.15 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=26.1
Q ss_pred cCCCccccccCCCCCCCCCCCCCCcEEeCCCceeeccCC
Q 004824 442 KPAPMVDSYSSRGPFLSCPNIPKPDILAPGSLVLASWSP 480 (728)
Q Consensus 442 ~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~ 480 (728)
...+.++.||++||. +||+|||++|+++++.
T Consensus 181 ~~~~~~~~~S~~g~~--------vdv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQ--------VEISGPGEAILSTVTV 211 (441)
T ss_dssp CTTCCBCTTSCCCTT--------EEEEEECSSEEEECST
T ss_pred CCCCCCCccccCCCc--------eEEEeccCCeeccccC
Confidence 345678999999974 4999999999999874
No 52
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=79.38 E-value=7.1 Score=33.98 Aligned_cols=55 Identities=13% Similarity=0.189 Sum_probs=43.8
Q ss_pred eEEEEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEeccc
Q 004824 637 VKEFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGPKL 693 (728)
Q Consensus 637 ~~t~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~ 693 (728)
.-.++..|.|....+.+|++++...+++++. .+..+++. +|+..++.|.+..+..
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v~-~g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQVE-PGEVLNLPMSLGADPD 86 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEEC-TTCEEEEEEEEEECGG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEEC-CCCEEEEEEEEEEChH
Confidence 4457778999999999999999987776653 25567887 8999999999988643
No 53
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=78.71 E-value=17 Score=32.70 Aligned_cols=84 Identities=14% Similarity=-0.018 Sum_probs=58.7
Q ss_pred EEEEEEEEeCCCCCeEEEEEEecC----CCeEEEEEeceEEEeccCeeEEEEEEEEeccc----C--CCceEEEEEEEEe
Q 004824 638 KEFWRTVTNAEEVGTAYTAKLTGI----DGLKVYVEPRRLVFKQKYEKQSYKLTLEGPKL----L--EKDVVYGSISWVD 707 (728)
Q Consensus 638 ~t~~rtvtn~g~~~~ty~~~~~~~----~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~----~--~~~~~~G~i~~~~ 707 (728)
.+-+.+|+|+|.-+.+|++..... ..--++++|..-++. +|++.+++|++..... . ...-+.--|++.=
T Consensus 45 ~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~-Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~V 123 (140)
T 3qbt_B 45 QKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLE-PNETVDISLDVYVSKDSVTILNSGEDKIEDILVLHL 123 (140)
T ss_dssp EEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEEC-TTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEEE
T ss_pred eeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccC-CCCeeEEEEEEEEccCcccccccchhhhheeEEEEe
Confidence 444558999999999999974321 112356689998888 8999999999986321 1 1134556677765
Q ss_pred CCCCcEEEeEEEEEee
Q 004824 708 DDGRYEVRSPIVATNL 723 (728)
Q Consensus 708 ~~~~~~v~~P~~~~~~ 723 (728)
. ++....+|+...+.
T Consensus 124 e-~G~d~fI~v~g~~~ 138 (140)
T 3qbt_B 124 D-RGKDYFLTISGNYL 138 (140)
T ss_dssp T-TSCEEEEEEEEEEC
T ss_pred e-cCCcEEEEEecccc
Confidence 4 56777899988774
No 54
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=76.83 E-value=12 Score=36.50 Aligned_cols=81 Identities=10% Similarity=0.022 Sum_probs=52.6
Q ss_pred eEEEEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEecccCCCceEEEEEEEEeCC---CC-c
Q 004824 637 VKEFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGPKLLEKDVVYGSISWVDDD---GR-Y 712 (728)
Q Consensus 637 ~~t~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G~i~~~~~~---~~-~ 712 (728)
..+.+.+++|.|+.+.+++.... |.-+++...| -.+. +|++.+++|+++......-+...+.|++...+ +. .
T Consensus 20 ~~~~~~~i~N~g~~pl~i~~~~~-p~~~~~~~~~--~~I~-PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~~ 95 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVAVVSL-PSFVSLDDRA--FRLQ-AREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKKA 95 (220)
T ss_dssp CCEEEEEEEECSSSCEEEEEEEC-CTTEECSCCE--EEEC-SSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCEE
T ss_pred cceEEEEEEeCCCCceEEEeccC-CCceEeeeCc--ceeC-CCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCccc
Confidence 34456689999998888876533 6666654444 4455 89999999999885433335667778876521 23 3
Q ss_pred EEEeEEEEE
Q 004824 713 EVRSPIVAT 721 (728)
Q Consensus 713 ~v~~P~~~~ 721 (728)
..++|+...
T Consensus 96 ~~~i~v~g~ 104 (220)
T 2qsv_A 96 VDSVMVSLP 104 (220)
T ss_dssp EEEEEEEEE
T ss_pred ccEEEEEEE
Confidence 445555543
No 55
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=75.47 E-value=25 Score=30.55 Aligned_cols=51 Identities=12% Similarity=0.089 Sum_probs=40.0
Q ss_pred eeEEEEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEec
Q 004824 636 VVKEFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGP 691 (728)
Q Consensus 636 ~~~t~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 691 (728)
+.++ .+|+|..+....|+|.-..|.-..| +|..=.+. +|++.++.|+..+.
T Consensus 25 g~~~--l~L~N~t~~~vAFKVKtT~p~~YrV--rP~~G~I~-Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 25 GNST--HNITSESDSRLAFKVKSSNNEHYRV--RPVYGFVD-AKGKSKLDINRLPG 75 (116)
T ss_dssp EEEE--EEEEECSSSEEEEEEEESCTTTEEE--ECSEEEEC-TTCEEEEEEEECSC
T ss_pred CEEE--EEEECCCCCeEEEEEEecCCCceEE--cCCceEEC-CCCeEEEEEEeCCC
Confidence 4444 4899999988899999888877665 68765444 89999999999874
No 56
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=59.49 E-value=70 Score=33.56 Aligned_cols=85 Identities=14% Similarity=0.017 Sum_probs=57.4
Q ss_pred eEEEEEEEEeCCCCCeEEEEEEecCCCeE----EEEEeceEEEeccCeeEEEEEEEEecccC----C--CceEEEEEEEE
Q 004824 637 VKEFWRTVTNAEEVGTAYTAKLTGIDGLK----VYVEPRRLVFKQKYEKQSYKLTLEGPKLL----E--KDVVYGSISWV 706 (728)
Q Consensus 637 ~~t~~rtvtn~g~~~~ty~~~~~~~~g~~----v~v~p~~~~~~~~g~~~~~~vt~~~~~~~----~--~~~~~G~i~~~ 706 (728)
..+-+.||+|+|..+.+|++.-....... ++++|..-++. +|++.+++|++...... + ..-.+--+++.
T Consensus 47 ~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~-Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL~ 125 (366)
T 3qis_A 47 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLE-PNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 125 (366)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEEC-TTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEEE
T ss_pred eEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEEC-CCCEEEEEEEEEECHHHHHHHhcCccccceEEEEE
Confidence 44555689999999999999654322222 67789998888 89999999999875410 0 22345556665
Q ss_pred eCCCCcEEEeEEEEEee
Q 004824 707 DDDGRYEVRSPIVATNL 723 (728)
Q Consensus 707 ~~~~~~~v~~P~~~~~~ 723 (728)
=. +++...+|+-..+.
T Consensus 126 ve-~G~d~FI~v~~~~~ 141 (366)
T 3qis_A 126 LD-RGKDYFLTISGNYL 141 (366)
T ss_dssp ET-TSCEEEEEEEEEEC
T ss_pred Ee-CCCcEEEEeccccC
Confidence 54 44555777766654
No 57
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=56.64 E-value=45 Score=29.37 Aligned_cols=51 Identities=12% Similarity=0.091 Sum_probs=35.9
Q ss_pred eeEEEEEEEEeCCCCC-eEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEe
Q 004824 636 VVKEFWRTVTNAEEVG-TAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEG 690 (728)
Q Consensus 636 ~~~t~~rtvtn~g~~~-~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~ 690 (728)
...+++.+|+|.|..+ ..|+|.+.. .|-.+.-. ...+. +|+++++++++.+
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~La-~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSLG-PKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEEC-TTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--EeccC-CCCeEEEEEEEEc
Confidence 5788999999999764 567777654 45555433 23565 7888888877764
No 58
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=56.34 E-value=69 Score=35.76 Aligned_cols=79 Identities=10% Similarity=-0.062 Sum_probs=51.9
Q ss_pred CCCceeeeccCCCCCCCCceeEEEEEEEEeCCCCCeEE-EEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEecccCC
Q 004824 617 NYPSFITFFNDYDSSSDEKVVKEFWRTVTNAEEVGTAY-TAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGPKLLE 695 (728)
Q Consensus 617 n~psi~~~~~~~~~~~~~~~~~t~~rtvtn~g~~~~ty-~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~ 695 (728)
..|.+++.-. ++.+++.+|+|.+..+..- ++++..|.+.+++. ....+. +|++.+++++|+.+....
T Consensus 363 ~~~~~~~~~g---------~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~g~~~t~~~~vt~~~~~~ 430 (601)
T 1w8o_A 363 TIPDVALEPG---------QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPLM-PGRQAKGQVTITVPAGTT 430 (601)
T ss_dssp ECCCEEECTT---------CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCBC-TTCEEEEEEEEECCTTCC
T ss_pred cCccceecCC---------ceeEEEEEEECCCceeccCceEEEecCCCcEEec--cccccC-CCCceEEEEEEecCCCCC
Confidence 4677777532 5788888999976543222 44467789988876 234455 799999988888865444
Q ss_pred CceEEEEEEEEe
Q 004824 696 KDVVYGSISWVD 707 (728)
Q Consensus 696 ~~~~~G~i~~~~ 707 (728)
...+.=-+.+..
T Consensus 431 ~g~y~l~~~~~~ 442 (601)
T 1w8o_A 431 PGRYRVGATLRT 442 (601)
T ss_dssp CEEEEEEEEEEE
T ss_pred CCcEEeeEEEEe
Confidence 344444456666
No 59
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=47.82 E-value=68 Score=27.33 Aligned_cols=49 Identities=8% Similarity=0.034 Sum_probs=39.4
Q ss_pred EEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEec
Q 004824 640 FWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGP 691 (728)
Q Consensus 640 ~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 691 (728)
-+.+++|..+....|+|.-..|.-..| +|..=.+. +|++.++.|+..+.
T Consensus 19 ~~l~L~N~t~~~vaFKVKtT~p~~y~V--rP~~G~I~-P~~~~~i~I~~q~~ 67 (109)
T 1row_A 19 STHKLVNGGAEKIVFKIKSSNNNEYRI--APVFGFVD-PSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEECSSSCEEEEEEESCSSSEEE--ECSEEEEC-TTEEEEEEEEECSC
T ss_pred EEEEEEcCCCCeEEEEEEeCCCCceEE--cCCceEEC-CCCeEEEEEEeCCC
Confidence 345899999999999999988876665 68765555 89999999998873
No 60
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=46.64 E-value=48 Score=29.02 Aligned_cols=52 Identities=15% Similarity=0.063 Sum_probs=41.6
Q ss_pred eEEEEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEec
Q 004824 637 VKEFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGP 691 (728)
Q Consensus 637 ~~t~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 691 (728)
.++-+.+|+|.++....|++.-.+|.-.. |.|..=.+. +|++..+.|++.+.
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~~y~--VrP~~G~i~-P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPRRYC--VRPNSGVID-PGSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGGGEE--EESCEEEEC-TTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCCceE--EeCCCcEEC-CCCeEEEEEEECcC
Confidence 34555689999998899999998887555 578876665 89999999999873
No 61
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=43.09 E-value=1.2e+02 Score=29.00 Aligned_cols=78 Identities=13% Similarity=0.072 Sum_probs=45.1
Q ss_pred eEEEEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEecccCCCc-e--EEEEEEEEeCCC-Cc
Q 004824 637 VKEFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGPKLLEKD-V--VYGSISWVDDDG-RY 712 (728)
Q Consensus 637 ~~t~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~-~--~~G~i~~~~~~~-~~ 712 (728)
..+.+.+++|+|+.+...+-....-.-..+. +..-.+. +|++.+++|++++.. ..+. | ....|++...+. .+
T Consensus 135 ~~~~~f~i~N~G~~pL~I~~v~~scgct~~~--~~~~~i~-PGe~~~i~v~~~~~~-~~g~~~~~~~~~i~v~~N~~~~p 210 (220)
T 2qsv_A 135 TTKAAIEIRNVGAGPLRLHSVTTRNPALTAV--PDRTEIK-PGGSTLLRIAVDPQV-MKAEGWQSIAADISIICNDPQAP 210 (220)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEECSTTEEEE--ESCSEEC-TTCEEEEEEEECHHH-HHHTTCSEEEEEEEEEESCTTCS
T ss_pred eEEEEEEEEECCCCCEEEEEEEeCCCCEeee--cCCccCC-CCCEEEEEEEEecCC-CCCcccceeccEEEEEECCCCCc
Confidence 4555669999999876654322222334444 3333455 899999999998743 2122 1 556777665322 23
Q ss_pred EEEeEE
Q 004824 713 EVRSPI 718 (728)
Q Consensus 713 ~v~~P~ 718 (728)
.+++.|
T Consensus 211 ~~~l~i 216 (220)
T 2qsv_A 211 LRRIKV 216 (220)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 445444
No 62
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=42.59 E-value=52 Score=29.89 Aligned_cols=50 Identities=14% Similarity=0.128 Sum_probs=40.9
Q ss_pred EEEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEec
Q 004824 639 EFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGP 691 (728)
Q Consensus 639 t~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 691 (728)
+-+.+|+|..+....|++.-.+|.-.. |.|..=.+. ++++.++.|++.+.
T Consensus 38 ~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI~-P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 38 KTLIVLTNVTKNIVAFKVRTTAPEKYR--VKPSNSSCD-PGASIDIIVSPHGG 87 (152)
T ss_dssp CEEEEEEBCSSSCEEEEEEESCTTTEE--EESSEEEEC-TTCEEEEEEEECSS
T ss_pred EEEEEEEcCCCCeEEEEEECCCCCcee--ecCCCcEEC-CCCeEEEEEEecCc
Confidence 345589999998899999999887655 478876666 89999999999874
No 63
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=42.43 E-value=7.4 Score=33.97 Aligned_cols=52 Identities=25% Similarity=0.191 Sum_probs=32.1
Q ss_pred EEEEEEEeCCCCCeEEEEEEe-cCCCeEEEEEeceEEEec-cCeeEEEEEEEEe
Q 004824 639 EFWRTVTNAEEVGTAYTAKLT-GIDGLKVYVEPRRLVFKQ-KYEKQSYKLTLEG 690 (728)
Q Consensus 639 t~~rtvtn~g~~~~ty~~~~~-~~~g~~v~v~p~~~~~~~-~g~~~~~~vt~~~ 690 (728)
.+..-+++.+.+..+..+.+. .|.|++++++|.++++.- .-.+++|.|+++.
T Consensus 56 ~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~ 109 (119)
T 2kq1_A 56 EVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEM 109 (119)
T ss_dssp EEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCC
T ss_pred EEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEE
Confidence 333455565543333444555 688999999999887762 3345666666654
No 64
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=40.37 E-value=64 Score=28.21 Aligned_cols=48 Identities=23% Similarity=0.269 Sum_probs=39.8
Q ss_pred EEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEe
Q 004824 640 FWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEG 690 (728)
Q Consensus 640 ~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~ 690 (728)
-..+|+|.++....|++.-.+|.-.. |.|..=.+. +|++..+.|++.+
T Consensus 29 ~~l~l~N~s~~~vaFKVKTT~p~~y~--VrP~~Gii~-P~~s~~v~V~~q~ 76 (126)
T 1msp_A 29 YHIKITNAGGRRIGWAIKTTNMRRLS--VDPPCGVLD-PKEKVLMAVSCDT 76 (126)
T ss_dssp EEEEEEECSSSCEEEEEEESCTTTEE--EESCEEEEC-TTCEEEEEEEECC
T ss_pred EEEEEECCCCCeEEEEEEcCCCCcEE--EECCCeEEC-CCCEEEEEEEecC
Confidence 34589999998899999999888655 478877676 8999999999887
No 65
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=39.33 E-value=42 Score=27.71 Aligned_cols=27 Identities=11% Similarity=0.129 Sum_probs=20.5
Q ss_pred EEEEEeceEEEeccCeeEEEEEEEEecc
Q 004824 665 KVYVEPRRLVFKQKYEKQSYKLTLEGPK 692 (728)
Q Consensus 665 ~v~v~p~~~~~~~~g~~~~~~vt~~~~~ 692 (728)
.|++.|..+++. .|++.+++.++.+..
T Consensus 8 ~i~l~~~~~~l~-vG~t~~L~atv~P~~ 34 (91)
T 2l04_A 8 GMTVTPASTSVV-KGQSTTLTVAFQPEG 34 (91)
T ss_dssp CEEEECCCEEEE-TTCEEEEEEEECCSS
T ss_pred EEEEeCCceEEE-cCCEEEEEEEEeccc
Confidence 355678888887 788888888887643
No 66
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=39.07 E-value=1.1e+02 Score=26.56 Aligned_cols=71 Identities=10% Similarity=-0.011 Sum_probs=43.0
Q ss_pred eeEEEEEEEEeCCCCCeE--------EEEEEecCCCeEEE---------EEeceEEEeccCeeEEEEEEEEecccCCCce
Q 004824 636 VVKEFWRTVTNAEEVGTA--------YTAKLTGIDGLKVY---------VEPRRLVFKQKYEKQSYKLTLEGPKLLEKDV 698 (728)
Q Consensus 636 ~~~t~~rtvtn~g~~~~t--------y~~~~~~~~g~~v~---------v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~ 698 (728)
+...++.+|+|.++.+.+ |.+.+....|-.|- --....++. +|++++|.+++...-.+....
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~-pGE~~~f~~~w~~~~~pG~Yt 96 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLE-SGETYDFSDVWKEVPEPGTYE 96 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEEC-TTCEEEEEEEESSCCCSEEEE
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEEC-CCCEEEEEEEeCCCCCCccEE
Confidence 567888899999876533 55555555554443 112245666 899999999998311122234
Q ss_pred EEEEEEEEe
Q 004824 699 VYGSISWVD 707 (728)
Q Consensus 699 ~~G~i~~~~ 707 (728)
+.+++.=..
T Consensus 97 l~a~l~~~~ 105 (120)
T 3isy_A 97 VKVTFKGRA 105 (120)
T ss_dssp EEEEECCEE
T ss_pred EEEEEEeee
Confidence 566555443
No 67
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=36.04 E-value=62 Score=29.10 Aligned_cols=50 Identities=12% Similarity=0.052 Sum_probs=40.4
Q ss_pred EEEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEec
Q 004824 639 EFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGP 691 (728)
Q Consensus 639 t~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 691 (728)
+-..+|+|..+....|++.-.+|.-..| .|..=.+. ++++..+.|++.+.
T Consensus 34 ~~~l~L~N~s~~~VaFKVKTT~p~~y~V--rP~~GiI~-P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 34 TTNLKLQNPSDRKVCFKVKTTAPRRYCV--RPNSGIID-PGSIVTVSVMLQPF 83 (147)
T ss_dssp CEEEEEECCSSSCEEEEEEESCTTSEEE--ESSEEECC-TTCEEEEEEEECCC
T ss_pred EEEEEEECCCCCcEEEEEECCCCccEEE--cCCCcEEC-CCCeEEEEEEECCC
Confidence 3445899999988999999998986554 78876555 89999999999873
No 68
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=35.92 E-value=1.9e+02 Score=24.31 Aligned_cols=66 Identities=15% Similarity=0.079 Sum_probs=43.5
Q ss_pred ceeeeccCCCCCCCCceeEEEEEEEEeCCCCCeEEEEEEecCCCeEEEEEeceEEEeccCeeEEEEEEEEecccCCCceE
Q 004824 620 SFITFFNDYDSSSDEKVVKEFWRTVTNAEEVGTAYTAKLTGIDGLKVYVEPRRLVFKQKYEKQSYKLTLEGPKLLEKDVV 699 (728)
Q Consensus 620 si~~~~~~~~~~~~~~~~~t~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~ 699 (728)
.+++.|.. .--.++.||+|-......|.-.+..|.- +++ .+. ..++-.|.|.+... ..++
T Consensus 35 vlsV~F~~--------~~~~vTItItNe~TG~~VYs~~~s~p~~--i~I-----dLn-ge~sG~Y~IeI~~~----~~~L 94 (101)
T 3sd2_A 35 ILNVSFGR--------AKDYAIITVTNKATGEIVHSKTYHNTSI--VMI-----DMS-SCEKGEYTIHIILN----DCLL 94 (101)
T ss_dssp EEEEEESS--------CCSCEEEEEEETTTCCEEEEEEESSCSE--EEE-----ECT-TSCSEEEEEEEEET----TEEE
T ss_pred EEEEEecc--------CCCcEEEEEEECCCCcEEEEEeccCCcE--EEE-----EcC-CCcCceEEEEEEeC----CcEE
Confidence 67788874 2344566999986667889887776542 222 232 33478888888862 4678
Q ss_pred EEEEEE
Q 004824 700 YGSISW 705 (728)
Q Consensus 700 ~G~i~~ 705 (728)
.|..++
T Consensus 95 tG~F~i 100 (101)
T 3sd2_A 95 EGTFTV 100 (101)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 887664
No 69
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=35.30 E-value=55 Score=37.82 Aligned_cols=55 Identities=7% Similarity=0.011 Sum_probs=33.0
Q ss_pred eeEEEEEEEEeCCCCCeEE--EEEEecCCC-e----EEEEEeceE-EEeccCeeEEEEEEEEec
Q 004824 636 VVKEFWRTVTNAEEVGTAY--TAKLTGIDG-L----KVYVEPRRL-VFKQKYEKQSYKLTLEGP 691 (728)
Q Consensus 636 ~~~t~~rtvtn~g~~~~ty--~~~~~~~~g-~----~v~v~p~~~-~~~~~g~~~~~~vt~~~~ 691 (728)
++.+++.+|||+|+.+..- .+=+..|.+ + +--.-=.++ .+ ++||+++++++|+..
T Consensus 615 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L-~pGes~~V~~~l~~~ 677 (721)
T 2x41_A 615 ETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLL-NPGESEEVVLEIPVR 677 (721)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCB-CTTCEEEEEEEEEGG
T ss_pred CeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccC-CCCCeEEEEEEECHH
Confidence 5688999999999765333 333344432 1 110111122 23 489999999999873
No 70
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=34.47 E-value=23 Score=26.78 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=25.3
Q ss_pred hhHHHHHHHHHHhhhCCCCCHHHHHHHHHhcc
Q 004824 505 ATPHVAGVAGLLKAAHPDWSPAAIRSALVTTA 536 (728)
Q Consensus 505 AaP~VAG~aALl~~~~p~lsp~~ik~~L~~TA 536 (728)
..|..--....|++.||+++...|+..|...-
T Consensus 5 ~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~ 36 (59)
T 1wgl_A 5 SSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQR 36 (59)
T ss_dssp SSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTT
T ss_pred CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcC
Confidence 33444556778999999999999999998664
No 71
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=33.51 E-value=1.1e+02 Score=35.16 Aligned_cols=55 Identities=15% Similarity=0.054 Sum_probs=34.5
Q ss_pred eeEEEEEEEEeCCCCCeEEEEE--EecCCCe-----EEEEEeceEEEeccCeeEEEEEEEEec
Q 004824 636 VVKEFWRTVTNAEEVGTAYTAK--LTGIDGL-----KVYVEPRRLVFKQKYEKQSYKLTLEGP 691 (728)
Q Consensus 636 ~~~t~~rtvtn~g~~~~ty~~~--~~~~~g~-----~v~v~p~~~~~~~~g~~~~~~vt~~~~ 691 (728)
...+++.+|||+|+.+..-.|. +..|.+- +.-.-=.++.+. +||+++++++++..
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L~-pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNLT-PGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEEC-TTCEEEEEEEEEGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhcccceeC-CCCeEEEEEEEcHH
Confidence 5688999999999876544433 3444321 111112233454 89999999999874
No 72
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=31.84 E-value=80 Score=33.11 Aligned_cols=49 Identities=18% Similarity=0.150 Sum_probs=32.2
Q ss_pred eeEEEEEEEEeCCCCCeE---EE-EEEe--c----------C------CCeEEEEEeceEEEeccCeeEEEEEEEEe
Q 004824 636 VVKEFWRTVTNAEEVGTA---YT-AKLT--G----------I------DGLKVYVEPRRLVFKQKYEKQSYKLTLEG 690 (728)
Q Consensus 636 ~~~t~~rtvtn~g~~~~t---y~-~~~~--~----------~------~g~~v~v~p~~~~~~~~g~~~~~~vt~~~ 690 (728)
.+.+++.+|||.|+++.. |+ +.+. . | .| ++ +|+ -+. +||+++++|+.+-
T Consensus 298 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI~-PGETrt~~V~a~d 368 (419)
T 3rfr_A 298 RELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VIA-PGESKEIVVKIQD 368 (419)
T ss_dssp SEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CBC-TTCEEEEEEEEEC
T ss_pred cEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--CcC-CCcceEEEEEeeh
Confidence 578899999999987643 21 1111 1 1 24 33 565 454 8999999998885
No 73
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=24.92 E-value=3.6e+02 Score=26.52 Aligned_cols=53 Identities=11% Similarity=0.023 Sum_probs=35.7
Q ss_pred EEEEEEEEeCCCCCeEEEEEEecCC--------CeEEEEEeceEEEeccCeeEEEEEEEEec
Q 004824 638 KEFWRTVTNAEEVGTAYTAKLTGID--------GLKVYVEPRRLVFKQKYEKQSYKLTLEGP 691 (728)
Q Consensus 638 ~t~~rtvtn~g~~~~ty~~~~~~~~--------g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 691 (728)
...+.+|+|.++.+.--.+-++... ..-+.|+|..+.+. +|+++.+.|.....
T Consensus 44 k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~-pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 44 REVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVE-PNGGAVLRIAYLKA 104 (257)
T ss_dssp SEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEEC-TTEEEEEEEEECCC
T ss_pred cEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEEC-CCCceEEEEEECCC
Confidence 3455689998875433333344221 23488899999998 89999999976653
No 74
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=24.04 E-value=2.4e+02 Score=33.06 Aligned_cols=44 Identities=23% Similarity=0.189 Sum_probs=31.6
Q ss_pred CceeeccccchhHHHHHHHHHHhhhCCCCC-HHHHHHHHHhcccc
Q 004824 495 NFNLMSGTSMATPHVAGVAGLLKAAHPDWS-PAAIRSALVTTASP 538 (728)
Q Consensus 495 ~y~~~sGTSmAaP~VAG~aALl~~~~p~ls-p~~ik~~L~~TA~~ 538 (728)
-...++|..++-|-+.-+.|+|...+|.-- ...|-++|.--..+
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNP 662 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVP 662 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCC
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCC
Confidence 345777888877877777888888887655 56777777655544
No 75
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=23.65 E-value=54 Score=29.93 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=27.9
Q ss_pred eeeccccchhHHHHHHHHHHhhhCCCCCHHHHHHH
Q 004824 497 NLMSGTSMATPHVAGVAGLLKAAHPDWSPAAIRSA 531 (728)
Q Consensus 497 ~~~sGTSmAaP~VAG~aALl~~~~p~lsp~~ik~~ 531 (728)
-.+.|-| =|++|-|++|||++.+-..+|++|.+.
T Consensus 77 l~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 77 MHFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CCCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EEEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 3455666 479999999999999999999998653
No 76
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=20.66 E-value=3.3e+02 Score=23.25 Aligned_cols=24 Identities=21% Similarity=0.298 Sum_probs=17.2
Q ss_pred eeEEEEEEEEeCCCCC-eEEEEEEe
Q 004824 636 VVKEFWRTVTNAEEVG-TAYTAKLT 659 (728)
Q Consensus 636 ~~~t~~rtvtn~g~~~-~ty~~~~~ 659 (728)
...+++.+|+|.|... ..+++.+.
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEE
Confidence 6789999999999753 33555543
Done!