Query 004825
Match_columns 728
No_of_seqs 359 out of 3315
Neff 9.4
Searched_HMMs 46136
Date Thu Mar 28 13:33:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004825.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004825hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03052 acetate--CoA ligase; 100.0 9E-101 2E-105 888.3 76.6 718 4-728 3-728 (728)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 2.5E-85 5.4E-90 707.9 53.5 515 169-721 1-522 (528)
3 PRK12467 peptide synthase; Pro 100.0 1.6E-86 3.5E-91 883.0 42.3 650 17-720 1406-2084(3956)
4 PTZ00237 acetyl-CoA synthetase 100.0 3.1E-82 6.7E-87 729.5 60.3 584 116-721 7-623 (647)
5 PRK12467 peptide synthase; Pro 100.0 2.6E-84 5.5E-89 861.9 41.2 649 17-720 341-1017(3956)
6 TIGR02316 propion_prpE propion 100.0 1E-80 2.3E-85 717.3 64.4 580 118-722 2-605 (628)
7 TIGR03443 alpha_am_amid L-amin 100.0 3E-83 6.6E-88 801.7 46.4 673 16-717 80-824 (1389)
8 PLN02654 acetate-CoA ligase 100.0 1E-80 2.2E-85 719.3 63.4 583 117-721 30-640 (666)
9 PRK03584 acetoacetyl-CoA synth 100.0 3.7E-80 8.1E-85 716.7 66.2 607 81-722 3-626 (655)
10 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 3E-80 6.4E-85 714.5 62.7 580 116-721 4-602 (625)
11 PRK12316 peptide synthase; Pro 100.0 1.8E-83 3.9E-88 866.9 40.6 632 17-719 2890-3542(5163)
12 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.3E-79 2.8E-84 709.1 65.9 605 81-721 4-626 (652)
13 PRK12316 peptide synthase; Pro 100.0 6.3E-83 1.4E-87 861.7 43.1 641 17-720 341-1005(5163)
14 PRK05691 peptide synthase; Val 100.0 1.2E-82 2.6E-87 853.7 44.7 648 18-718 3553-4225(4334)
15 PRK10252 entF enterobactin syn 100.0 1.8E-82 3.9E-87 792.1 41.6 640 16-718 295-964 (1296)
16 PRK00174 acetyl-CoA synthetase 100.0 2E-78 4.4E-83 700.4 63.2 579 116-722 16-611 (637)
17 PRK05691 peptide synthase; Val 100.0 6.4E-82 1.4E-86 846.6 39.2 651 17-719 2020-2695(4334)
18 PRK10524 prpE propionyl-CoA sy 100.0 2E-78 4.4E-83 699.7 63.1 580 117-721 2-605 (629)
19 KOG1175 Acyl-CoA synthetase [L 100.0 1.2E-77 2.6E-82 647.6 51.1 586 112-721 6-602 (626)
20 KOG1176 Acyl-CoA synthetase [L 100.0 1.5E-74 3.2E-79 627.8 50.4 507 186-724 25-535 (537)
21 KOG1177 Long chain fatty acid 100.0 3.3E-73 7.2E-78 572.3 41.5 518 178-721 51-587 (596)
22 PRK04319 acetyl-CoA synthetase 100.0 1.5E-70 3.3E-75 627.1 54.8 519 169-722 35-560 (570)
23 PRK07788 acyl-CoA synthetase; 100.0 9.7E-71 2.1E-75 626.3 50.6 496 178-718 50-548 (549)
24 COG0318 CaiC Acyl-CoA syntheta 100.0 3E-70 6.4E-75 615.9 51.5 505 178-721 12-527 (534)
25 PRK07529 AMP-binding domain pr 100.0 1.9E-69 4.2E-74 623.2 55.4 525 173-721 21-570 (632)
26 PRK06060 acyl-CoA synthetase; 100.0 7.3E-70 1.6E-74 635.5 50.6 480 180-719 7-490 (705)
27 PLN03051 acyl-activating enzym 100.0 2.3E-69 4.9E-74 606.7 52.3 486 242-728 1-499 (499)
28 PRK06334 long chain fatty acid 100.0 1.3E-69 2.9E-74 613.6 48.2 499 178-722 20-536 (539)
29 PLN02860 o-succinylbenzoate-Co 100.0 1.6E-68 3.4E-73 609.2 50.1 508 179-721 9-554 (563)
30 PRK13382 acyl-CoA synthetase; 100.0 7.9E-68 1.7E-72 600.0 48.4 488 179-717 45-536 (537)
31 PRK13295 cyclohexanecarboxylat 100.0 6.5E-67 1.4E-71 594.4 55.0 517 167-721 18-544 (547)
32 PLN02574 4-coumarate--CoA liga 100.0 4.7E-67 1E-71 596.7 52.6 505 177-722 41-555 (560)
33 PRK08314 long-chain-fatty-acid 100.0 5.2E-67 1.1E-71 595.9 50.6 511 178-722 11-543 (546)
34 PLN02246 4-coumarate--CoA liga 100.0 1.6E-66 3.4E-71 590.1 52.5 502 179-721 25-536 (537)
35 PRK09274 peptide synthase; Pro 100.0 7E-67 1.5E-71 595.2 47.6 506 181-721 10-548 (552)
36 PLN02736 long-chain acyl-CoA s 100.0 1.2E-66 2.6E-71 602.5 49.4 517 178-721 45-641 (651)
37 COG1021 EntE Peptide arylation 100.0 4.4E-68 9.5E-73 523.2 31.7 503 180-721 31-538 (542)
38 PRK05677 long-chain-fatty-acid 100.0 3.5E-66 7.6E-71 590.1 52.4 507 179-720 26-556 (562)
39 PRK05857 acyl-CoA synthetase; 100.0 1.4E-66 3.1E-71 590.1 48.2 502 179-721 16-531 (540)
40 PRK07638 acyl-CoA synthetase; 100.0 2.5E-66 5.5E-71 581.6 48.2 480 181-724 5-484 (487)
41 PLN02614 long-chain acyl-CoA s 100.0 1.2E-66 2.6E-71 600.9 44.6 516 177-721 45-649 (666)
42 PRK07656 long-chain-fatty-acid 100.0 1.5E-65 3.3E-70 579.6 51.3 502 178-717 6-512 (513)
43 PRK08315 AMP-binding domain pr 100.0 2.7E-65 5.8E-70 583.5 53.3 516 178-724 17-554 (559)
44 PLN02330 4-coumarate--CoA liga 100.0 2.7E-65 5.9E-70 580.9 51.9 504 179-723 30-543 (546)
45 TIGR01734 D-ala-DACP-lig D-ala 100.0 2.7E-65 5.8E-70 575.8 50.4 491 181-720 4-501 (502)
46 PRK05605 long-chain-fatty-acid 100.0 4.3E-65 9.2E-70 583.0 52.5 511 179-722 34-570 (573)
47 PRK05852 acyl-CoA synthetase; 100.0 3.8E-65 8.2E-70 578.4 51.0 516 168-721 7-532 (534)
48 PRK12583 acyl-CoA synthetase; 100.0 1E-64 2.2E-69 578.7 54.9 515 178-721 19-552 (558)
49 PRK06145 acyl-CoA synthetase; 100.0 5.8E-65 1.3E-69 572.3 51.2 490 180-720 5-496 (497)
50 PRK03640 O-succinylbenzoic aci 100.0 3.5E-65 7.7E-70 572.0 48.8 477 180-721 5-482 (483)
51 PRK08043 bifunctional acyl-[ac 100.0 2.4E-65 5.1E-70 597.8 48.8 503 179-723 206-715 (718)
52 TIGR03098 ligase_PEP_1 acyl-Co 100.0 7.8E-65 1.7E-69 574.0 51.4 505 180-717 3-514 (515)
53 PRK05851 long-chain-fatty-acid 100.0 1.2E-65 2.6E-70 580.5 43.9 484 179-721 4-522 (525)
54 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.1E-64 2.3E-69 575.3 51.5 504 179-716 24-537 (538)
55 PRK06839 acyl-CoA synthetase; 100.0 8.7E-65 1.9E-69 570.9 50.4 486 181-721 6-495 (496)
56 PRK08279 long-chain-acyl-CoA s 100.0 6.2E-65 1.4E-69 584.4 49.7 508 178-722 38-565 (600)
57 PRK07769 long-chain-fatty-acid 100.0 3.1E-65 6.7E-70 589.8 47.4 505 179-721 23-614 (631)
58 PRK07470 acyl-CoA synthetase; 100.0 3.7E-65 8E-70 578.1 47.1 499 179-722 9-519 (528)
59 PRK06155 crotonobetaine/carnit 100.0 1.2E-64 2.6E-69 574.3 50.2 496 179-720 23-523 (542)
60 PRK06187 long-chain-fatty-acid 100.0 1.7E-64 3.6E-69 572.3 51.3 504 177-721 6-519 (521)
61 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.8E-64 3.9E-69 572.0 50.4 497 179-716 25-527 (527)
62 PRK07514 malonyl-CoA synthase; 100.0 4.3E-64 9.3E-69 566.3 53.1 495 179-722 5-502 (504)
63 PRK07008 long-chain-fatty-acid 100.0 2.7E-64 5.8E-69 571.6 51.4 510 178-723 11-535 (539)
64 PLN02861 long-chain-fatty-acid 100.0 4.8E-65 1E-69 588.1 45.9 517 177-721 43-646 (660)
65 PLN03102 acyl-activating enzym 100.0 1.6E-64 3.5E-69 577.2 49.4 513 179-723 16-556 (579)
66 PRK12476 putative fatty-acid-- 100.0 6.3E-65 1.4E-69 584.8 46.1 504 179-721 36-606 (612)
67 PRK08316 acyl-CoA synthetase; 100.0 4.7E-64 1E-68 568.8 51.2 508 177-722 11-520 (523)
68 PRK10946 entE enterobactin syn 100.0 7E-64 1.5E-68 567.8 52.1 501 178-723 26-534 (536)
69 PRK09088 acyl-CoA synthetase; 100.0 1.2E-63 2.6E-68 560.3 52.8 480 184-722 2-486 (488)
70 PRK05620 long-chain-fatty-acid 100.0 4.4E-64 9.6E-69 574.5 50.2 519 179-721 12-557 (576)
71 PRK07786 long-chain-fatty-acid 100.0 5.3E-64 1.2E-68 569.8 50.3 508 175-725 16-528 (542)
72 PRK12492 long-chain-fatty-acid 100.0 1.1E-63 2.4E-68 569.5 52.1 505 179-718 26-561 (562)
73 PRK06087 short chain acyl-CoA 100.0 1E-63 2.2E-68 568.6 51.6 506 179-721 25-536 (547)
74 PRK13390 acyl-CoA synthetase; 100.0 4.9E-64 1.1E-68 565.1 48.4 490 184-716 4-501 (501)
75 PRK04813 D-alanine--poly(phosp 100.0 8.2E-64 1.8E-68 564.0 50.1 492 181-721 6-503 (503)
76 PRK07868 acyl-CoA synthetase; 100.0 3.7E-64 8E-69 601.2 49.8 502 167-719 435-956 (994)
77 PRK08008 caiC putative crotono 100.0 9.2E-64 2E-68 565.3 50.0 501 178-716 8-517 (517)
78 PRK06018 putative acyl-CoA syn 100.0 3E-63 6.6E-68 563.6 52.8 513 178-724 11-537 (542)
79 PRK13388 acyl-CoA synthetase; 100.0 2.6E-63 5.7E-68 563.1 50.6 487 180-722 6-507 (540)
80 PRK08633 2-acyl-glycerophospho 100.0 6.7E-64 1.5E-68 619.0 49.3 513 179-723 617-1145(1146)
81 PRK07798 acyl-CoA synthetase; 100.0 6.4E-63 1.4E-67 560.9 53.3 506 179-721 5-532 (533)
82 TIGR02262 benz_CoA_lig benzoat 100.0 4.7E-63 1E-67 558.1 50.1 500 176-718 3-508 (508)
83 PRK07867 acyl-CoA synthetase; 100.0 7.9E-63 1.7E-67 557.4 51.7 485 179-721 7-507 (529)
84 PRK07059 Long-chain-fatty-acid 100.0 9.4E-63 2E-67 561.7 51.5 507 177-718 23-555 (557)
85 TIGR03205 pimA dicarboxylate-- 100.0 1.2E-62 2.5E-67 559.0 50.7 514 168-716 12-541 (541)
86 PRK06188 acyl-CoA synthetase; 100.0 1.5E-62 3.3E-67 556.1 51.6 496 179-721 14-517 (524)
87 PRK06164 acyl-CoA synthetase; 100.0 1.7E-62 3.7E-67 557.8 50.4 509 179-724 12-535 (540)
88 PRK08751 putative long-chain f 100.0 1.4E-62 3E-67 560.9 49.7 506 179-719 27-558 (560)
89 PRK06710 long-chain-fatty-acid 100.0 1.9E-62 4.1E-67 560.0 50.4 510 178-724 25-558 (563)
90 PRK07787 acyl-CoA synthetase; 100.0 2.6E-62 5.6E-67 546.4 48.9 456 188-717 11-469 (471)
91 PRK06178 acyl-CoA synthetase; 100.0 5.6E-62 1.2E-66 556.6 52.5 520 169-723 26-567 (567)
92 PRK13383 acyl-CoA synthetase; 100.0 2.5E-62 5.5E-67 552.9 48.9 473 181-716 39-515 (516)
93 PTZ00216 acyl-CoA synthetase; 100.0 7.5E-63 1.6E-67 573.6 44.6 525 167-721 62-691 (700)
94 PLN02479 acetate-CoA ligase 100.0 1.5E-61 3.3E-66 552.3 52.4 521 179-728 22-567 (567)
95 PRK07445 O-succinylbenzoic aci 100.0 8.8E-62 1.9E-66 536.6 46.8 427 210-721 19-447 (452)
96 PLN02387 long-chain-fatty-acid 100.0 5.1E-62 1.1E-66 565.2 47.1 524 177-721 58-689 (696)
97 PTZ00342 acyl-CoA synthetase; 100.0 1.1E-61 2.3E-66 558.2 48.6 517 178-721 62-734 (746)
98 PRK13391 acyl-CoA synthetase; 100.0 1.6E-61 3.4E-66 546.0 48.7 497 184-721 4-509 (511)
99 PRK08974 long-chain-fatty-acid 100.0 5E-61 1.1E-65 547.9 52.7 507 179-721 25-555 (560)
100 PRK12406 long-chain-fatty-acid 100.0 7.7E-61 1.7E-65 540.2 53.6 487 194-722 3-504 (509)
101 PLN02430 long-chain-fatty-acid 100.0 4.9E-61 1.1E-65 553.7 46.3 521 175-721 40-646 (660)
102 PRK08276 long-chain-fatty-acid 100.0 1.8E-60 4E-65 536.3 49.7 478 210-723 11-498 (502)
103 PRK08180 feruloyl-CoA synthase 100.0 5.2E-61 1.1E-65 552.1 45.6 506 178-721 40-596 (614)
104 PRK06814 acylglycerophosphoeth 100.0 1.2E-60 2.6E-65 587.8 51.0 494 181-722 635-1133(1140)
105 COG1020 EntF Non-ribosomal pep 100.0 2.2E-62 4.7E-67 568.1 33.2 553 17-636 67-642 (642)
106 PRK09029 O-succinylbenzoic aci 100.0 1.3E-60 2.9E-65 530.8 45.8 447 183-723 9-455 (458)
107 PRK08162 acyl-CoA synthetase; 100.0 7.9E-60 1.7E-64 536.6 52.9 510 179-724 20-542 (545)
108 PRK08308 acyl-CoA synthetase; 100.0 3.6E-60 7.8E-65 519.9 46.8 407 195-716 1-408 (414)
109 PRK05850 acyl-CoA synthetase; 100.0 3.2E-59 6.9E-64 535.1 45.2 501 181-721 5-568 (578)
110 TIGR01923 menE O-succinylbenzo 100.0 6.2E-59 1.4E-63 514.5 45.3 435 212-715 1-436 (436)
111 PRK12582 acyl-CoA synthetase; 100.0 3.3E-59 7.1E-64 538.2 44.6 516 170-721 42-607 (624)
112 PRK09192 acyl-CoA synthetase; 100.0 4.7E-59 1E-63 533.1 44.5 495 177-721 21-566 (579)
113 PRK07768 long-chain-fatty-acid 100.0 1.8E-57 4E-62 517.0 43.7 489 181-720 6-544 (545)
114 COG1022 FAA1 Long-chain acyl-C 100.0 2.9E-57 6.2E-62 496.1 36.2 504 170-721 9-601 (613)
115 KOG1256 Long-chain acyl-CoA sy 100.0 1E-54 2.3E-59 467.5 44.3 519 176-721 74-680 (691)
116 PF00501 AMP-binding: AMP-bind 100.0 6.7E-54 1.5E-58 471.4 30.8 401 183-618 1-417 (417)
117 KOG1179 Very long-chain acyl-C 100.0 2.5E-52 5.4E-57 430.4 34.3 512 177-719 77-611 (649)
118 KOG1180 Acyl-CoA synthetase [L 100.0 7E-52 1.5E-56 424.9 34.5 495 207-721 86-669 (678)
119 TIGR01733 AA-adenyl-dom amino 100.0 2.2E-51 4.7E-56 450.1 40.8 399 212-643 1-408 (408)
120 PRK07824 O-succinylbenzoic aci 100.0 1.3E-45 2.9E-50 396.6 36.4 322 353-721 32-357 (358)
121 PTZ00297 pantothenate kinase; 100.0 2E-43 4.3E-48 421.5 42.1 490 168-721 418-995 (1452)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 8.5E-41 1.8E-45 357.6 31.1 289 356-711 95-386 (386)
123 KOG1178 Non-ribosomal peptide 100.0 5E-40 1.1E-44 372.3 23.9 502 182-721 41-579 (1032)
124 TIGR02155 PA_CoA_ligase phenyl 100.0 6E-36 1.3E-40 328.3 30.5 328 353-713 72-418 (422)
125 TIGR03335 F390_ftsA coenzyme F 100.0 5.6E-29 1.2E-33 273.3 29.6 328 353-712 83-440 (445)
126 KOG3628 Predicted AMP-binding 100.0 1.1E-25 2.3E-30 247.2 36.7 516 177-721 770-1351(1363)
127 TIGR03089 conserved hypothetic 99.9 7.1E-25 1.5E-29 217.4 22.7 221 183-447 2-227 (227)
128 COG1541 PaaK Coenzyme F390 syn 99.9 5.6E-23 1.2E-27 213.9 28.4 326 352-712 86-430 (438)
129 PRK09188 serine/threonine prot 99.8 1.3E-20 2.7E-25 197.5 15.2 114 590-720 210-327 (365)
130 TIGR02304 aden_form_hyp probab 99.7 2.9E-15 6.2E-20 161.0 27.4 257 359-663 102-378 (430)
131 KOG3628 Predicted AMP-binding 99.6 5E-13 1.1E-17 148.6 24.9 490 188-721 105-704 (1363)
132 PF13193 AMP-binding_C: AMP-bi 99.3 4.7E-12 1E-16 101.4 6.5 70 626-709 1-73 (73)
133 PF13745 HxxPF_rpt: HxxPF-repe 99.0 6.7E-12 1.5E-16 105.7 -5.8 80 44-130 1-91 (91)
134 PF04443 LuxE: Acyl-protein sy 98.8 2.3E-07 5E-12 97.9 19.0 236 354-623 87-359 (365)
135 PF03321 GH3: GH3 auxin-respon 98.4 3E-06 6.6E-11 94.7 13.5 164 470-664 266-451 (528)
136 PLN02249 indole-3-acetic acid- 97.8 0.0022 4.7E-08 72.2 20.3 44 590-633 409-456 (597)
137 PLN02620 indole-3-acetic acid- 97.7 0.005 1.1E-07 68.6 20.9 44 590-633 422-469 (612)
138 PLN02247 indole-3-acetic acid- 97.5 0.0096 2.1E-07 66.6 20.6 44 590-633 416-463 (606)
139 PF14535 AMP-binding_C_2: AMP- 97.5 0.00049 1.1E-08 58.0 7.9 88 619-712 1-91 (96)
140 COG1541 PaaK Coenzyme F390 syn 93.6 0.31 6.7E-06 52.3 8.9 99 192-292 90-192 (438)
141 TIGR02155 PA_CoA_ligase phenyl 82.4 10 0.00022 41.6 11.0 100 191-292 74-177 (422)
142 TIGR03335 F390_ftsA coenzyme F 82.2 8.5 0.00018 42.5 10.3 95 192-290 86-184 (445)
143 TIGR03089 conserved hypothetic 76.6 14 0.0003 36.6 8.8 77 190-283 148-226 (227)
144 KOG1177 Long chain fatty acid 69.0 36 0.00079 37.0 9.9 109 372-481 74-199 (596)
145 PRK07656 long-chain-fatty-acid 63.7 66 0.0014 35.9 11.9 98 189-291 163-264 (513)
146 PLN02736 long-chain acyl-CoA s 62.1 56 0.0012 38.1 11.2 101 374-479 77-180 (651)
147 PRK08315 AMP-binding domain pr 60.5 94 0.002 35.2 12.5 98 190-291 197-298 (559)
148 PF09580 Spore_YhcN_YlaJ: Spor 59.5 39 0.00084 31.9 7.6 56 624-689 77-132 (177)
149 PF00501 AMP-binding: AMP-bind 58.2 46 0.001 36.0 9.1 89 354-451 8-99 (417)
150 PRK06187 long-chain-fatty-acid 54.2 1.5E+02 0.0033 32.9 12.8 98 190-292 165-265 (521)
151 KOG1178 Non-ribosomal peptide 53.5 1.5 3.2E-05 52.4 -3.8 136 212-381 130-265 (1032)
152 PLN02387 long-chain-fatty-acid 53.4 89 0.0019 36.8 10.9 103 374-481 105-210 (696)
153 PRK09274 peptide synthase; Pro 50.9 1E+02 0.0023 34.8 10.8 99 354-453 19-121 (552)
154 COG0399 WecE Predicted pyridox 50.7 63 0.0014 34.5 8.1 66 221-290 60-130 (374)
155 PRK13295 cyclohexanecarboxylat 50.6 79 0.0017 35.8 9.7 97 354-454 37-136 (547)
156 PRK12583 acyl-CoA synthetase; 49.4 1.7E+02 0.0038 33.0 12.3 98 190-291 199-300 (558)
157 PLN03052 acetate--CoA ligase; 49.0 1.2E+02 0.0027 35.8 11.2 99 354-455 188-290 (728)
158 PF01041 DegT_DnrJ_EryC1: DegT 48.9 46 0.001 35.5 7.0 66 221-290 51-121 (363)
159 KOG1176 Acyl-CoA synthetase [L 48.5 73 0.0016 36.0 8.6 88 373-461 43-135 (537)
160 PRK06839 acyl-CoA synthetase; 48.4 1.2E+02 0.0026 33.6 10.7 96 354-459 15-114 (496)
161 COG1611 Predicted Rossmann fol 48.3 64 0.0014 31.3 7.1 71 190-273 13-84 (205)
162 PRK06155 crotonobetaine/carnit 47.8 1E+02 0.0023 34.8 10.1 86 375-461 46-134 (542)
163 PRK04319 acetyl-CoA synthetase 47.1 99 0.0021 35.2 9.8 85 374-459 72-159 (570)
164 cd06451 AGAT_like Alanine-glyo 47.0 2.8E+02 0.006 29.2 12.7 71 218-289 32-104 (356)
165 TIGR02188 Ac_CoA_lig_AcsA acet 46.9 95 0.0021 35.9 9.8 97 354-454 70-169 (625)
166 TIGR03098 ligase_PEP_1 acyl-Co 46.5 1.9E+02 0.004 32.3 11.9 81 208-292 178-259 (515)
167 TIGR01733 AA-adenyl-dom amino 46.4 84 0.0018 33.7 8.7 67 392-459 20-86 (408)
168 PRK10524 prpE propionyl-CoA sy 46.0 1.1E+02 0.0025 35.3 10.2 96 354-453 66-164 (629)
169 PRK06334 long chain fatty acid 45.8 1.2E+02 0.0026 34.4 10.1 84 375-459 45-128 (539)
170 PLN03051 acyl-activating enzym 45.6 1.6E+02 0.0034 32.9 11.0 99 190-292 117-218 (499)
171 PRK08279 long-chain-acyl-CoA s 45.5 3.8E+02 0.0083 30.7 14.4 84 375-459 62-148 (600)
172 PRK07788 acyl-CoA synthetase; 45.5 96 0.0021 35.1 9.4 84 375-459 74-160 (549)
173 PRK00174 acetyl-CoA synthetase 45.5 1.3E+02 0.0027 35.0 10.5 97 354-454 80-179 (637)
174 PLN02614 long-chain acyl-CoA s 44.9 1.7E+02 0.0036 34.3 11.4 86 375-461 79-167 (666)
175 PRK05605 long-chain-fatty-acid 42.9 1.1E+02 0.0023 35.0 9.2 84 375-459 57-143 (573)
176 PTZ00342 acyl-CoA synthetase; 42.6 1.8E+02 0.0038 34.6 11.0 118 354-480 74-208 (746)
177 PRK13383 acyl-CoA synthetase; 42.1 1.1E+02 0.0025 34.2 9.2 84 375-459 60-146 (516)
178 TIGR02316 propion_prpE propion 41.7 1.1E+02 0.0025 35.3 9.4 96 354-453 65-163 (628)
179 PLN02430 long-chain-fatty-acid 41.7 1.9E+02 0.004 33.9 11.1 101 375-479 76-179 (660)
180 COG4009 Uncharacterized protei 41.6 99 0.0021 24.5 5.6 66 210-286 9-77 (88)
181 COG0031 CysK Cysteine synthase 40.7 1.9E+02 0.0041 29.8 9.3 61 229-290 55-116 (300)
182 PTZ00237 acetyl-CoA synthetase 40.4 1E+02 0.0022 35.9 8.7 79 374-453 91-172 (647)
183 PRK13382 acyl-CoA synthetase; 40.3 1.4E+02 0.003 33.8 9.5 82 375-457 68-152 (537)
184 PRK08316 acyl-CoA synthetase; 40.1 1.3E+02 0.0027 33.7 9.2 86 374-460 35-123 (523)
185 TIGR02898 spore_YhcN_YlaJ spor 39.6 1.3E+02 0.0027 27.8 7.2 58 625-690 57-114 (158)
186 PRK08043 bifunctional acyl-[ac 39.1 3.1E+02 0.0067 32.4 12.6 97 190-290 363-463 (718)
187 PRK09088 acyl-CoA synthetase; 39.1 2E+02 0.0043 31.9 10.5 92 354-453 8-102 (488)
188 PLN02861 long-chain-fatty-acid 38.7 1.5E+02 0.0032 34.7 9.7 86 374-460 76-164 (660)
189 TIGR02379 ECA_wecE TDP-4-keto- 38.5 98 0.0021 33.3 7.5 64 223-290 59-127 (376)
190 TIGR02262 benz_CoA_lig benzoat 38.2 2.2E+02 0.0047 31.8 10.7 99 190-291 159-261 (508)
191 PRK07514 malonyl-CoA synthase; 37.6 1.4E+02 0.003 33.3 8.9 86 373-459 26-114 (504)
192 PLN03102 acyl-activating enzym 37.3 1.3E+02 0.0027 34.5 8.7 83 375-458 39-124 (579)
193 cd01445 TST_Repeats Thiosulfat 36.7 96 0.0021 27.8 6.0 41 221-261 81-124 (138)
194 PLN02654 acetate-CoA ligase 36.7 1.2E+02 0.0026 35.5 8.5 80 374-454 119-201 (666)
195 PRK06188 acyl-CoA synthetase; 36.5 3.6E+02 0.0079 30.1 12.2 97 190-291 166-264 (524)
196 TIGR03443 alpha_am_amid L-amin 36.2 1.4E+02 0.0031 38.4 9.7 99 354-453 249-350 (1389)
197 PRK06164 acyl-CoA synthetase; 35.9 3.2E+02 0.0068 30.7 11.6 97 190-291 179-278 (540)
198 PRK08008 caiC putative crotono 35.7 1.9E+02 0.0041 32.3 9.7 101 354-459 20-123 (517)
199 PF09153 DUF1938: Domain of un 35.2 57 0.0012 26.1 3.5 46 194-245 16-62 (86)
200 PRK07008 long-chain-fatty-acid 35.0 2E+02 0.0044 32.4 9.9 99 190-291 174-276 (539)
201 PRK13388 acyl-CoA synthetase; 34.8 2.2E+02 0.0047 32.2 10.1 84 375-459 26-113 (540)
202 TIGR01217 ac_ac_CoA_syn acetoa 34.5 1.4E+02 0.0031 34.8 8.6 79 374-453 113-194 (652)
203 PLN02574 4-coumarate--CoA liga 34.5 1.6E+02 0.0035 33.5 8.9 98 354-459 52-153 (560)
204 PRK08308 acyl-CoA synthetase; 34.4 5E+02 0.011 27.9 12.5 97 190-291 99-199 (414)
205 PLN02246 4-coumarate--CoA liga 34.2 1.5E+02 0.0032 33.5 8.5 98 354-459 36-136 (537)
206 PRK11706 TDP-4-oxo-6-deoxy-D-g 34.2 1.4E+02 0.003 32.0 7.9 61 226-290 62-127 (375)
207 PRK03584 acetoacetyl-CoA synth 33.9 1.5E+02 0.0032 34.6 8.7 95 355-454 98-195 (655)
208 PRK08162 acyl-CoA synthetase; 33.9 1.6E+02 0.0036 33.1 8.9 84 375-459 43-129 (545)
209 TIGR01923 menE O-succinylbenzo 33.7 1.6E+02 0.0034 32.0 8.4 68 386-454 13-80 (436)
210 PRK07529 AMP-binding domain pr 33.4 2.4E+02 0.0052 32.7 10.3 96 354-452 38-136 (632)
211 PRK05677 long-chain-fatty-acid 33.1 2.1E+02 0.0046 32.4 9.7 83 374-457 48-134 (562)
212 PRK12492 long-chain-fatty-acid 32.5 1.6E+02 0.0035 33.5 8.5 81 374-455 48-132 (562)
213 PLN02479 acetate-CoA ligase 32.5 2.1E+02 0.0046 32.5 9.5 82 375-457 45-129 (567)
214 PRK13237 tyrosine phenol-lyase 31.9 2.1E+02 0.0045 31.5 8.5 50 228-282 110-174 (460)
215 PRK08751 putative long-chain f 31.7 1.8E+02 0.0038 33.0 8.7 95 354-458 38-136 (560)
216 PRK13391 acyl-CoA synthetase; 31.2 3E+02 0.0064 30.7 10.3 97 354-458 10-109 (511)
217 PRK07470 acyl-CoA synthetase; 31.0 2.3E+02 0.005 31.8 9.4 82 375-457 32-116 (528)
218 PRK07798 acyl-CoA synthetase; 31.0 2.3E+02 0.0049 31.7 9.4 86 374-460 27-115 (533)
219 PRK12406 long-chain-fatty-acid 30.5 1.9E+02 0.0041 32.3 8.6 83 376-459 12-97 (509)
220 PRK05857 acyl-CoA synthetase; 30.5 1.6E+02 0.0035 33.2 8.1 94 354-455 27-123 (540)
221 TIGR03208 cyc_hxne_CoA_lg cycl 30.4 2E+02 0.0042 32.5 8.7 97 354-454 35-134 (538)
222 PRK03640 O-succinylbenzoic aci 30.1 2.4E+02 0.0052 31.0 9.3 83 375-458 27-112 (483)
223 PLN02860 o-succinylbenzoate-Co 29.8 1.7E+02 0.0037 33.2 8.2 79 375-454 32-113 (563)
224 COG0318 CaiC Acyl-CoA syntheta 29.7 4.7E+02 0.01 29.5 11.6 93 354-454 24-119 (534)
225 PRK06178 acyl-CoA synthetase; 29.6 2.6E+02 0.0056 31.7 9.6 85 375-460 58-145 (567)
226 PF05452 Clavanin: Clavanin; 29.4 18 0.00039 27.2 0.0 11 585-595 69-79 (80)
227 PRK07638 acyl-CoA synthetase; 29.3 5.3E+02 0.012 28.4 11.9 96 192-292 143-241 (487)
228 PRK08314 long-chain-fatty-acid 28.6 2.5E+02 0.0054 31.6 9.2 85 375-460 35-123 (546)
229 PLN02565 cysteine synthase 28.5 4.1E+02 0.0089 27.8 10.0 67 224-290 54-121 (322)
230 PRK15407 lipopolysaccharide bi 27.8 1.9E+02 0.0042 31.8 7.7 58 229-290 105-167 (438)
231 TIGR03595 Obg_CgtA_exten Obg f 27.8 58 0.0013 25.3 2.6 23 219-241 41-63 (69)
232 TIGR03588 PseC UDP-4-keto-6-de 27.5 2.8E+02 0.006 29.7 8.8 67 221-290 55-129 (380)
233 cd07050 BMC_EutL_repeat2 ethan 27.4 1.2E+02 0.0026 24.2 4.1 43 224-266 3-46 (87)
234 COG2236 Predicted phosphoribos 27.4 91 0.002 29.8 4.3 33 209-241 5-37 (192)
235 PLN02330 4-coumarate--CoA liga 27.4 2E+02 0.0043 32.5 8.1 84 374-458 54-140 (546)
236 PRK08276 long-chain-fatty-acid 27.2 2.3E+02 0.005 31.5 8.5 83 376-459 12-97 (502)
237 PRK07059 Long-chain-fatty-acid 27.0 2.6E+02 0.0057 31.6 9.1 84 374-458 47-133 (557)
238 PRK05934 type III secretion sy 27.0 2.9E+02 0.0063 28.5 7.8 72 625-701 74-148 (341)
239 PF01037 AsnC_trans_reg: AsnC 26.8 2.4E+02 0.0052 21.5 6.2 54 622-690 10-63 (74)
240 PLN02409 serine--glyoxylate am 26.8 3E+02 0.0065 29.8 9.0 74 217-290 41-115 (401)
241 TIGR01139 cysK cysteine syntha 26.6 4.4E+02 0.0096 27.0 9.9 65 226-291 47-112 (298)
242 PLN02556 cysteine synthase/L-3 26.6 3.8E+02 0.0082 28.7 9.4 62 229-290 103-165 (368)
243 PTZ00216 acyl-CoA synthetase; 26.6 2.8E+02 0.006 32.7 9.3 87 373-460 119-208 (700)
244 PRK06018 putative acyl-CoA syn 26.5 2E+02 0.0044 32.4 8.0 85 374-459 38-125 (542)
245 cd01449 TST_Repeat_2 Thiosulfa 26.3 1.4E+02 0.003 25.5 5.2 40 221-260 64-103 (118)
246 PRK07867 acyl-CoA synthetase; 26.1 3.1E+02 0.0067 30.9 9.3 83 375-458 28-114 (529)
247 PRK09162 hypoxanthine-guanine 25.9 1.6E+02 0.0036 27.8 5.9 47 209-256 15-61 (181)
248 PRK05620 long-chain-fatty-acid 25.4 2.7E+02 0.0058 31.8 8.7 85 374-459 37-125 (576)
249 PRK06087 short chain acyl-CoA 25.0 2.3E+02 0.005 32.0 8.0 90 354-452 36-128 (547)
250 PRK07786 long-chain-fatty-acid 24.9 3.2E+02 0.0069 30.8 9.2 83 375-458 42-127 (542)
251 cd01519 RHOD_HSP67B2 Member of 24.6 1.7E+02 0.0037 24.3 5.3 40 221-260 52-91 (106)
252 KOG0633 Histidinol phosphate a 24.4 1.1E+02 0.0024 30.5 4.2 72 223-294 98-172 (375)
253 PF09269 DUF1967: Domain of un 24.3 56 0.0012 25.4 1.9 31 210-240 32-62 (69)
254 PRK11658 UDP-4-amino-4-deoxy-L 24.3 2.7E+02 0.0059 29.8 8.0 65 221-289 59-128 (379)
255 PRK07787 acyl-CoA synthetase; 24.0 7.9E+02 0.017 26.9 12.0 96 190-291 126-225 (471)
256 KOG1250 Threonine/serine dehyd 23.8 5.1E+02 0.011 27.8 9.1 53 240-292 118-170 (457)
257 TIGR02080 O_succ_thio_ly O-suc 23.6 4.6E+02 0.0099 28.2 9.5 60 232-292 87-146 (382)
258 PRK06702 O-acetylhomoserine am 23.4 4.2E+02 0.0091 29.1 9.2 67 221-290 87-155 (432)
259 PRK11761 cysM cysteine synthas 23.4 5.2E+02 0.011 26.6 9.5 69 221-290 48-117 (296)
260 PRK08045 cystathionine gamma-s 23.3 9.5E+02 0.02 25.8 13.8 59 232-292 88-147 (386)
261 PRK12582 acyl-CoA synthetase; 23.2 3.1E+02 0.0068 31.6 8.8 79 374-453 79-165 (624)
262 PRK13479 2-aminoethylphosphona 22.8 9E+02 0.02 25.4 12.0 76 213-290 35-111 (368)
263 PRK05852 acyl-CoA synthetase; 22.6 3.3E+02 0.0071 30.6 8.7 76 375-451 43-121 (534)
264 PRK08633 2-acyl-glycerophospho 22.5 7.6E+02 0.017 30.9 12.7 100 189-292 779-882 (1146)
265 TIGR03590 PseG pseudaminic aci 22.5 4.6E+02 0.01 26.7 8.9 98 210-318 11-112 (279)
266 PRK04813 D-alanine--poly(phosp 22.2 2.8E+02 0.006 30.7 7.9 78 375-453 27-107 (503)
267 PRK06060 acyl-CoA synthetase; 22.2 3.5E+02 0.0076 31.8 9.1 93 354-457 19-114 (705)
268 PRK14807 histidinol-phosphate 22.2 9.2E+02 0.02 25.2 14.7 67 232-301 97-167 (351)
269 TIGR01136 cysKM cysteine synth 22.1 5.9E+02 0.013 26.2 9.7 65 226-291 48-113 (299)
270 PRK10696 tRNA 2-thiocytidine b 22.0 8.1E+02 0.017 24.5 10.4 70 220-289 13-94 (258)
271 PRK11493 sseA 3-mercaptopyruva 21.7 1.5E+02 0.0032 30.4 5.0 53 209-261 200-257 (281)
272 PRK10946 entE enterobactin syn 21.5 7.3E+02 0.016 27.8 11.2 97 190-291 180-281 (536)
273 PF07994 NAD_binding_5: Myo-in 21.4 7.5E+02 0.016 25.5 9.9 72 211-284 126-227 (295)
274 TIGR01734 D-ala-DACP-lig D-ala 21.1 2.8E+02 0.0061 30.7 7.7 79 375-454 25-106 (502)
275 PF00156 Pribosyltran: Phospho 21.0 2.2E+02 0.0047 24.5 5.4 35 210-246 4-38 (125)
276 PRK10595 SOS cell division inh 20.7 3.7E+02 0.0079 25.0 6.7 66 224-289 70-141 (164)
277 PRK13390 acyl-CoA synthetase; 20.6 4.1E+02 0.0089 29.5 8.9 93 354-454 10-105 (501)
278 PRK07868 acyl-CoA synthetase; 20.4 8.3E+02 0.018 30.2 12.0 97 191-291 605-703 (994)
279 PF09664 DUF2399: Protein of u 20.3 6.7E+02 0.015 22.9 11.3 112 373-494 21-135 (152)
No 1
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=8.7e-101 Score=888.32 Aligned_cols=718 Identities=70% Similarity=1.171 Sum_probs=616.4
Q ss_pred cccccccccChHHHHHcCCChHHHHHHHHHHHHHHHhcCCCChhhHHHHHHhhcCCCCCCccchhheeeecccCCCC---
Q 004825 4 YNYKALDCITSYDIEALGIPSKLAEQLHEKLAEIVNTHGAATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPD--- 80 (728)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~hq~~pfe~lv~~l~~~r~~~~~~~~f~~~~~~~~~~--- 80 (728)
.-+|.+|-|+..||++.|+..++++.|.++|+++..++..+....+-..--+-|+|..+.+.||+||+-+.-++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (728)
T PLN03052 3 MAGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRAGASPPSIWRRISQSLLTPSHPFALHQLMYYSCYKNWDSDTLG 82 (728)
T ss_pred cccCChhhcCHHHHHHcCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHhcCCCCCccHHHHhhhhcccCCCccccC
Confidence 35789999999999999999999999999999999988768888888888889999999999999999999988333
Q ss_pred -CCCccCChhhhhhccHHHHHHHhccccccCCCCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCC
Q 004825 81 -PPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNG 159 (728)
Q Consensus 81 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 159 (728)
.++|.|+++...+++|..+++..+.......|...+.+|+.|+++|+++++.||.++++.+.+.|.+++.++++...
T Consensus 83 ~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~v~~~~~-- 160 (728)
T PLN03052 83 PPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISSFSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSD-- 160 (728)
T ss_pred CCCCCCCChhhcccchHHHHHHHhhhhhhHHhhCCChhhHHHHHHHHhhCHHHHHHHHHHhcCCCccCCCceeecCCC--
Confidence 58999999988889999998887554444447778899999999999999999999999998899999999986521
Q ss_pred CCCCCCCCCCCCCCCcchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEE
Q 004825 160 ENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIA 239 (728)
Q Consensus 160 ~~~~~~~~~~w~~~~~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Va 239 (728)
...+..+||+++..|.+++||++++.++|+++|+++.++++..+..+++||+||.++++++|++|++.|+++||+|+
T Consensus 161 ---~~~~~~~wf~g~~ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVa 237 (728)
T PLN03052 161 ---ESNPGGQWLPGAVLNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIA 237 (728)
T ss_pred ---CCCCCCEECCCCEeEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 12456789999999999999999877899999999987643334467899999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCCcEEEEcCC
Q 004825 240 IDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAPLAIVIPAK 318 (728)
Q Consensus 240 i~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~ 318 (728)
|+++|++++++++|||+++|++++|++|+++.+++.+++++++|+++|+++...+.++.++.. .+.+.....+++++..
T Consensus 238 i~~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~ 317 (728)
T PLN03052 238 IDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPAD 317 (728)
T ss_pred EEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCC
Confidence 999999999999999999999999999999999999999999999999999877777777765 4444444455555543
Q ss_pred CCCcccccCCCCcCHHHHHHhhhccc-cCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCC
Q 004825 319 GSSFSMKLRDGDISWLDFLERVRKLK-ENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKA 397 (728)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (728)
.............+|++++....... +....+...++++++||+|||||||+||||+++|++++..+......++++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~ 397 (728)
T PLN03052 318 GKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKG 397 (728)
T ss_pred CCccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCC
Confidence 21111111123566887765432100 11122233467999999999999999999999999988877777677899999
Q ss_pred CEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEE
Q 004825 398 DIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFG 477 (728)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~ 477 (728)
|+++++++++|+++.+.++++|+.|++++++++.+++..+++++++++||++.++|++++.|.+.......++++||.++
T Consensus 398 d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~ 477 (728)
T PLN03052 398 DIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFG 477 (728)
T ss_pred cEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEE
Confidence 99999999999999988999999999999999877778899999999999999999999999877545567889999999
Q ss_pred eecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEE
Q 004825 478 STGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELA 557 (728)
Q Consensus 478 ~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~ 557 (728)
+|||+++++...++.+.++..+++|.||+||+++++....+..+...+++|.|++|++++|+|++|+++|.|++++|||+
T Consensus 478 s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~ 557 (728)
T PLN03052 478 STGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELA 557 (728)
T ss_pred ecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEE
Confidence 99999999998888877665689999999999876555444444556789999999999999999999999875579999
Q ss_pred EeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCC
Q 004825 558 LSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSN 637 (728)
Q Consensus 558 v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~ 637 (728)
+.+.+++...+|++++.+..||..+|..+|.+||+|||++++++||+++|+||+||+||++|+||++.|||++|+..||+
T Consensus 558 v~~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~ 637 (728)
T PLN03052 558 LFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADES 637 (728)
T ss_pred EeCCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCC
Confidence 98888777777788888888999888888889999999999999999999999999999999999999999999547999
Q ss_pred eeeeEEEeecCCCCCceEEEEEEEec--CCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHH
Q 004825 638 VLETAAIGVPPPDGGPEQLTIVVVFK--DSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVL 715 (728)
Q Consensus 638 V~~~~Vv~~~~~~~g~~~l~a~vv~~--~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L 715 (728)
|.|++|++++++..|++.+++||+++ + +. ..+.++|+++|+++|+++|+++++|..|+++++||+|+|||++|+.|
T Consensus 638 V~eaaVvg~~d~~~g~e~~~afVvl~~~~-g~-~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~Rr~L 715 (728)
T PLN03052 638 VLETAAIGVPPPGGGPEQLVIAAVLKDPP-GS-NPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVL 715 (728)
T ss_pred cceEEEEeeecCCCCcEEEEEEEEEecCC-CC-CCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHHHHH
Confidence 99999999998766558999999987 4 44 35678999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCC
Q 004825 716 RKQLAQLDQNSKL 728 (728)
Q Consensus 716 ~~~~~~~~~~~~l 728 (728)
++++.+..++|||
T Consensus 716 r~~~~~~~~~~~~ 728 (728)
T PLN03052 716 RQQLAQELSRSKL 728 (728)
T ss_pred HHHHHhhhhccCC
Confidence 9999997779986
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=2.5e-85 Score=707.93 Aligned_cols=515 Identities=29% Similarity=0.471 Sum_probs=446.8
Q ss_pred CCCCCCcchHhhhhcccccC-CCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCH
Q 004825 169 QWLPGAFVNPAKNCLSVNSK-RSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNA-LGLDKGSAIAIDMPMNV 246 (728)
Q Consensus 169 ~w~~~~~~~~~~~~l~~~~~-~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~ 246 (728)
+||.++..|.+++|++++.. ..+|++|+++.++.+ + .+++||+||.++++++|+.|++ .|+ +||||+|+||+++
T Consensus 1 ~wf~~~~lN~~~n~~dr~~~~~~~~~~aii~~~e~~--~-~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~p 76 (528)
T COG0365 1 KWFEGGTLNLALNALDRHLEADRPDDTAIIFDGEDG--L-FRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSP 76 (528)
T ss_pred CCcCCceeechhhhhhhhhhccCCCceEEEEEcCCC--C-ceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCH
Confidence 59999999999999999985 457999999997621 1 2699999999999999999997 578 9999999999999
Q ss_pred HHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCccccc
Q 004825 247 NSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKL 326 (728)
Q Consensus 247 ~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 326 (728)
+.+++||||+|+||+++|+.+.++++.+++++++++++++|+++...++++.++....++.....++++....
T Consensus 77 e~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~------- 149 (528)
T COG0365 77 EAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG------- 149 (528)
T ss_pred HHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc-------
Confidence 9999999999999999999999999999999999999999999999999888887743333222244444322
Q ss_pred CCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHH-HHhcCCCCCCEEEecCC
Q 004825 327 RDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADA-WCHMDIRKADIVAWPTN 405 (728)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~-~~~~~~~~~d~~l~~~~ 405 (728)
.+|.++.+.... ..+..+..++|+++|+|||||||+||||+|+|++++...... ...+.+.++|++++.++
T Consensus 150 ----~~~~~~~~~~~~----~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad 221 (528)
T COG0365 150 ----LWYDEAVEKASE----KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSD 221 (528)
T ss_pred ----ccHHHHhhccCC----CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCC
Confidence 667776665432 344455889999999999999999999999999766555444 45688889999999999
Q ss_pred cchhhhHH-HHHHHhhhCcEEEEeCCCCC--cchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCC
Q 004825 406 LGWMMGPW-LVYASLLNGASIALYNGSPL--GSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEA 482 (728)
Q Consensus 406 ~~~~~~~~-~~~~~L~~G~~lvl~~~~~~--~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~ 482 (728)
++|.++.+ .++++|.+|++++++++.++ +.+++++|++++||+++++|+.+++|++....+..++++||.+.+.||+
T Consensus 222 ~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEP 301 (528)
T COG0365 222 PGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEP 301 (528)
T ss_pred chhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCC
Confidence 99999996 59999999999999988776 7889999999999999999999999999876677889999999999999
Q ss_pred CCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccc
Q 004825 483 SNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLI 562 (728)
Q Consensus 483 l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~ 562 (728)
|+++.++|+.+.++ +++.+.||+||++.++....+ +...++.|+|+||+++.|+|++|+++++|+ |+|+|....
T Consensus 302 Lnpe~~~w~~~~~g-~~i~d~~gqTEtg~~~~~~~~--~~~~g~~g~p~pG~~~~vvdd~g~~~~~~~---G~Lvi~~~~ 375 (528)
T COG0365 302 LNPEAFEWFYSALG-VWILDIYGQTETGMGFIAGRP--PVKNGSSGLPLPGYAVRRVDDEGNPVPPGV---GELVVRLPW 375 (528)
T ss_pred CCHHHHHHHHHHhC-CCEeccccccccCccccCCCC--CcCCCCCCCCCCCceeEEECCCCCcCCCCc---eEEEEeCCC
Confidence 99999999999886 999999999999976666555 344555599999999999999999999987 999997665
Q ss_pred cCCCccccCc-cccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeee
Q 004825 563 FGASSTLLNA-NHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLET 641 (728)
Q Consensus 563 ~~~~~~~~~~-~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~ 641 (728)
.+...+|+++ +.+.+.|.. . ||.|||.+++|+||+++|+||.||+||+.|+||.+.|||++|. +||.|.||
T Consensus 376 p~~~~~~w~d~er~~~~y~~-----~--~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~-~hP~VaEa 447 (528)
T COG0365 376 PGMALTYWNDPERYKEAYFG-----R--WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLL-AHPAVAEA 447 (528)
T ss_pred chhhhhhhCCHHHHHHHHhh-----c--eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHH-hCcceeee
Confidence 5555555554 444333321 1 9999999999999999999999999999999999999999996 99999999
Q ss_pred EEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 642 AAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 642 ~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+||+++|+..| +.++|||++++ +. ..+ +|+++|++++++.+.++++|+.|.++++||+|.||||.|+.|++.+.+
T Consensus 448 AvVg~pd~~kg-~~v~afVvL~~-g~-~~~--~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 448 AVVGVPDPGKG-QIVLAFVVLAA-GV-EPN--ELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred EEEeccCCCCC-cEEEEEEEecC-CC-ChH--HHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHhh
Confidence 99999999998 88999999998 76 444 999999999999999999999999999999999999999999999874
No 3
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.6e-86 Score=882.98 Aligned_cols=650 Identities=19% Similarity=0.211 Sum_probs=532.7
Q ss_pred HHHcCCChHHHHHHHHHHHHHHHhcCC--CChhhHHHHHHhhcCCCCCCccchhheeeecccCCCC--CC-Ccc------
Q 004825 17 IEALGIPSKLAEQLHEKLAEIVNTHGA--ATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPD--PP-AWI------ 85 (728)
Q Consensus 17 ~~~~~~~~~~~~~f~~~l~~~~~~~~~--~hq~~pfe~lv~~l~~~r~~~~~~~~f~~~~~~~~~~--~~-~~~------ 85 (728)
.+++|+..+.+.+|.++|++++++.++ +||++||++|++.|++.|+.+++|+ ||++|++.+. .. ...
T Consensus 1406 tlplR~~~~~~~t~~~~l~~v~~~~~~a~~hq~~p~~~i~~~l~~~r~~~~~pL--Fq~~~~~~~~~~~~~~~~~~~~~~ 1483 (3956)
T PRK12467 1406 TQVLRAEVDGQASFQQLLQQVKQAALEAQAHQDLPFEQLVEALQPERSLSHSPL--FQVMFNHQRDDHQAQAQLPGLSVE 1483 (3956)
T ss_pred eeEEEEecCCCCCHHHHHHHHHHHHHHHHhccCCCHHHHHHHhcccccCCCCCc--eeEEEEeecccccccccCCCceeE
Confidence 467888889999999999999998877 9999999999999999999999999 9999987221 00 111
Q ss_pred --CChhhhhhccHHHHHHHhccccccCC-CCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCC
Q 004825 86 --PDPEAAKVTNVGKLLQTRGEEFLGSG-YKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENH 162 (728)
Q Consensus 86 --~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (728)
......++|||++.+.+.++++...+ |++ ++|++.++++|.++|..+|+++. +.|+..+...++..++
T Consensus 1484 ~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~~~~lL~~l~----~~p~~~~~~l~~~~~~ 1554 (3956)
T PRK12467 1484 SLSWESQTAQFDLTLDTYESSEGLQASLTYAT-----DLFEASTIERLAGHWLNLLQGLV----ADPERRLGELDLLDEA 1554 (3956)
T ss_pred eeecCCcccccceEEEEEecCCeEEEEEEEeC-----CcCCHHHHHHHHHHHHHHHHHHh----hCccCceeeccccchH
Confidence 11124578899998877777888888 999 99999999999999999999984 4455555554443333
Q ss_pred CC-CCCCCCCCCCcc----hHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCE
Q 004825 163 LS-NPGGQWLPGAFV----NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSA 237 (728)
Q Consensus 163 ~~-~~~~~w~~~~~~----~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~ 237 (728)
+. .....|+.+... ....++|.++++++|+++|+++.+. ++||+||+++++++|++|+++|+++|++
T Consensus 1555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~~~~ 1626 (3956)
T PRK12467 1555 ERRQILEGWNATHTGYPLARLVHQLIEDQAAATPEAVALVFGEQ--------ELTYGELNRRANRLAHRLIALGVGPEVL 1626 (3956)
T ss_pred HhhhhHHhhcCCccCCCccccHHHHHHHHHHhCCCCeEEEeCCc--------EEeHHHHHHHHHHHHHHHHHcCCCCCCE
Confidence 33 334457654332 2456788889999999999999877 9999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcC
Q 004825 238 IAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPA 317 (728)
Q Consensus 238 Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 317 (728)
|+|+++||+++++++|||+|+|++|+||||.+|.+|+.+++++++++++|++......... ......+.++.
T Consensus 1627 V~l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~ 1698 (3956)
T PRK12467 1627 VGIAVERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPL--------PDGLRSLVLDQ 1698 (3956)
T ss_pred EEEEccCCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCcc--------ccCCcEEEecc
Confidence 9999999999999999999999999999999999999999999999999998754211100 00111222211
Q ss_pred CCCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCC
Q 004825 318 KGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKA 397 (728)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (728)
.. .+ ... .....+.....++++|||+|||||||+||||+++|+++++.+.+....++++++
T Consensus 1699 ~~------------~~---~~~----~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~ 1759 (3956)
T PRK12467 1699 ED------------DW---LEG----YSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAA 1759 (3956)
T ss_pred cc------------ch---hcc----CCCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcc
Confidence 10 00 000 011112234567999999999999999999999999999999999899999999
Q ss_pred CEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCC--CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeE
Q 004825 398 DIVAWPTNLGWMMGPWLVYASLLNGASIALYNGS--PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRC 475 (728)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~ 475 (728)
|++++++|++||++++++|.+|+.|+++++++.. .++..+++.|++++||++.++|++++.|.+... ....+++||.
T Consensus 1760 d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~ 1838 (3956)
T PRK12467 1760 DVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRR 1838 (3956)
T ss_pred cEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceE
Confidence 9999999999999999999999999999998643 367889999999999999999999999987422 2345789999
Q ss_pred EEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcc----cccccccccCCCCCceEEEEcCCCCccCCCCC
Q 004825 476 FGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLL----QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVP 551 (728)
Q Consensus 476 i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~ 551 (728)
+++|||+++++..+++.+.+++..++|.||+||+++.++..... ......++|+|++|++++|+|++++++|.|++
T Consensus 1839 v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~vp~G~~ 1918 (3956)
T PRK12467 1839 VVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILDASLNPVPIGVA 1918 (3956)
T ss_pred EEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEECCCCCCCCCCCc
Confidence 99999999999999998888778899999999999766543321 11235689999999999999999999999987
Q ss_pred ceeEEEEeccccCCCccccCccccccccccCCCC-CCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHH
Q 004825 552 GMGELALSPLIFGASSTLLNANHYDVYFSGMPSR-NGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERI 630 (728)
Q Consensus 552 giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~-~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~ 630 (728)
|||+|++..+..+ |+++++.|+++|+.+|+. +|.|||+|||+|||++||.|+|+||+|+|||++|+||+|+|||++
T Consensus 1919 --GEl~i~G~~v~~G-Yl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~ 1995 (3956)
T PRK12467 1919 --GELYLGGVGLARG-YLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEAR 1995 (3956)
T ss_pred --eEEEecccccccc-ccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEechHHHHHH
Confidence 9999977766543 467889999999999975 478999999999999999999999999999999999999999999
Q ss_pred HhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCC---CCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCC
Q 004825 631 CNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTP---PDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTAT 707 (728)
Q Consensus 631 l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~---~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~ 707 (728)
|. .||+|.+|+|++.+ ...+ ++++||++... +... .......+.++++++++||.||+|..|+.+++||+|+|
T Consensus 1996 l~-~~p~V~~a~vv~~~-~~~~-~~lva~vv~~~-~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~l~~lP~t~~ 2071 (3956)
T PRK12467 1996 LR-EQGGVREAVVIAQD-GANG-KQLVAYVVPTD-PGLVDDDEAQVALRAILKNHLKASLPEYMVPAHLVFLARMPLTPN 2071 (3956)
T ss_pred HH-hCCCcceEEEEEec-CCCC-cEEEEEEEecC-cccccccccccccHHHHHHHHHhhCchhhCchhhhhhhcCCCCCC
Confidence 95 99999999999876 3334 79999999865 3200 11122455677889999999999999999999999999
Q ss_pred CchhHHHHHHHHH
Q 004825 708 NKVMRRVLRKQLA 720 (728)
Q Consensus 708 GKvdR~~L~~~~~ 720 (728)
||+||++|++...
T Consensus 2072 GKidr~~L~~~~~ 2084 (3956)
T PRK12467 2072 GKLDRKALPAPDA 2084 (3956)
T ss_pred CCcchhhCCCCcc
Confidence 9999999987543
No 4
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-82 Score=729.55 Aligned_cols=584 Identities=21% Similarity=0.279 Sum_probs=470.9
Q ss_pred CCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCCCCCCCCCCCCCCcchHhhhhcccccCC--CCCC
Q 004825 116 ISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKR--SLDD 193 (728)
Q Consensus 116 ~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~~--~pd~ 193 (728)
+.+|+.++++|+++++.||.++++.+ +.|.+++.++++.. ....+||+++..|.++++|+++++. +|++
T Consensus 7 ~~~y~~~~~~s~~~~~~fw~~~~~~~-~~~~~~~~~~~~~~--------~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~ 77 (647)
T PTZ00237 7 PFDYENDSNYANSNPESFWDEVAKKY-VHWDKMYDKVYSGD--------EIYPDWFKGGELNTCYNVLDIHVKNPLKRDQ 77 (647)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHhc-CeeeCCcccccCCC--------CCchhhCCCCeeeHHHHHHHHhhcccCCCCc
Confidence 35789999999999999999999997 69999999997532 2237999999999999999998854 7999
Q ss_pred eEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHH
Q 004825 194 IVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLE 273 (728)
Q Consensus 194 ~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~ 273 (728)
+|+++.+.. .+..+++||+||.++++++|+.|+++||++||+|+|+++|++++++++|||+++|++++|++++++.++
T Consensus 78 ~A~~~~~~~--~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~ 155 (647)
T PTZ00237 78 DALIYECPY--LKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKS 155 (647)
T ss_pred eEEEEEcCC--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHH
Confidence 999986431 112358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCceEEEEecceecCCcccchHhh----Hhhc---CCcEEEEcCCCCC--c------ccccCCCCcCHHHHHH
Q 004825 274 ISARLRISKAKAIFTQDLIIRGDKSIPLYRV----IDAQ---APLAIVIPAKGSS--F------SMKLRDGDISWLDFLE 338 (728)
Q Consensus 274 l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~----~~~~---~~~~~~i~~~~~~--~------~~~~~~~~~~~~~~~~ 338 (728)
+.++|++++|+++|+++...+.++.+...+. .... ...++++...... . .....+....|.+++.
T Consensus 156 l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (647)
T PTZ00237 156 LIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEIK 235 (647)
T ss_pred HHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHHh
Confidence 9999999999999998866655544443311 1111 1233333221100 0 0001123456777665
Q ss_pred hhhcc-ccCccccccCCCCCceEEEecCCCCCCCceEEecCcH-HHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHH
Q 004825 339 RVRKL-KENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNAT-PFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVY 416 (728)
Q Consensus 339 ~~~~~-~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~-l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 416 (728)
..... ...........+++++||+|||||||.||||+++|++ ++.........+....+|++++.++++|+++...++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~~~~~~ 315 (647)
T PTZ00237 236 KIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFHGFLY 315 (647)
T ss_pred hhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCceEeeHHHHH
Confidence 32110 0111223456789999999999999999999999998 544443334456778899999999999998777789
Q ss_pred HHhhhCcEEEEeCCCC-C----cchHHHHHHHhCCcEEEecHHHHHHHHcCCC-----CCCCCCcCeeEEEeecCCCCHH
Q 004825 417 ASLLNGASIALYNGSP-L----GSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC-----IDGYDWSSIRCFGSTGEASNVD 486 (728)
Q Consensus 417 ~~L~~G~~lvl~~~~~-~----~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~-----~~~~~l~~lr~i~~gGe~l~~~ 486 (728)
.+|+.|++++++++.. . +..+++.|++++||++.++|++++.|++... ....++++||.+++|||+++++
T Consensus 316 ~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~ 395 (647)
T PTZ00237 316 GSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEES 395 (647)
T ss_pred HHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHH
Confidence 9999999999987642 2 4679999999999999999999999987532 1345689999999999999999
Q ss_pred HHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEecccc-CC
Q 004825 487 EYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIF-GA 565 (728)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~-~~ 565 (728)
+.+++.+.++ ++++|.||+||++++++..........+++|+|++|++++|+|++|++++.|+. |||++.++.. +.
T Consensus 396 ~~~~~~~~~g-~~i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~ge~--GEl~v~~p~~p~~ 472 (647)
T PTZ00237 396 IPEYIENKLK-IKSSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILSEDGKELNVNEI--GEVAFKLPMPPSF 472 (647)
T ss_pred HHHHHHHhcC-CCEEeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEECCCCCCCCCCCc--eEEEEeccCCchh
Confidence 9999988775 899999999999865443332222234789999999999999999999999986 9999965421 11
Q ss_pred -CccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEE
Q 004825 566 -SSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAI 644 (728)
Q Consensus 566 -~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv 644 (728)
..|+++++.+.++|..++ | ||+|||+|++++||+++|+||+||+||++|+||+|.|||++|. .||.|.+|+|+
T Consensus 473 ~~gy~~~~~~~~~~f~~~~---g--~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~-~~p~V~eaavv 546 (647)
T PTZ00237 473 ATTFYKNDEKFKQLFSKFP---G--YYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSIL-KHPLVLECCSI 546 (647)
T ss_pred hCceeCCHHHHHHHHhCCC---C--EEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHH-hCCCceeeEEE
Confidence 124556777777785433 4 9999999999999999999999999999999999999999996 99999999999
Q ss_pred eecCCCCCceEEEEEEEecCCCCC--CCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 645 GVPPPDGGPEQLTIVVVFKDSNYT--PPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 645 ~~~~~~~g~~~l~a~vv~~~~~~~--~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+++++..| +.++|||++++ +.. ..+.+++++.|++.++++|++|++|..|+++++||+|+||||+|+.|++++..
T Consensus 547 g~~~~~~g-~~~~a~Vv~~~-~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~ 623 (647)
T PTZ00237 547 GIYDPDCY-NVPIGLLVLKQ-DQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLND 623 (647)
T ss_pred eeEcCCCC-CEEEEEEEecc-CccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcC
Confidence 99998887 89999999875 210 24567888899999999999999999999999999999999999999999864
No 5
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.6e-84 Score=861.95 Aligned_cols=649 Identities=19% Similarity=0.212 Sum_probs=530.7
Q ss_pred HHHcCCChHHHHHHHHHHHHHHHhcCC--CChhhHHHHHHhhcCCCCCCccchhheeeecccCCCC--C-----CCc---
Q 004825 17 IEALGIPSKLAEQLHEKLAEIVNTHGA--ATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPD--P-----PAW--- 84 (728)
Q Consensus 17 ~~~~~~~~~~~~~f~~~l~~~~~~~~~--~hq~~pfe~lv~~l~~~r~~~~~~~~f~~~~~~~~~~--~-----~~~--- 84 (728)
.+++|+..+++.+|.++|++++++... +||++||++|++.|++.|+.+++|+ ||++|++.+. . ...
T Consensus 341 tlplrv~~~~~~t~~~ll~~v~~~~~~a~~hq~~p~~~l~~~l~~~~~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~~~ 418 (3956)
T PRK12467 341 TQVLKAEVDPQASFLELLQQVKRTALGAQAHQDLPFEQLVEALQPERSLSHSPL--FQVMFNHQNTATGGRDREGAQLPG 418 (3956)
T ss_pred eeeeEeecCCCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHhCCCCCCCCCCc--eEEEEEeecccccccccccccCCC
Confidence 468899999999999999999998877 9999999999999999999999999 9999988211 1 000
Q ss_pred -----cCChhhhhhccHHHHHHHhccccccCC-CCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCC
Q 004825 85 -----IPDPEAAKVTNVGKLLQTRGEEFLGSG-YKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPN 158 (728)
Q Consensus 85 -----~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 158 (728)
.+......++||++.+...++++.+.+ |++ ++|++.+++++.++|..+|+++. +.++..+...++
T Consensus 419 ~~~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~lf~~~~~~~~~~~~~~~l~~~~----~~~~~~i~~l~l 489 (3956)
T PRK12467 419 LTVEELSWARHTAQFDLALDTYESAQGLWAAFTYAT-----DLFEATTIERLATHWRNLLEAIV----AEPRRRLGELPL 489 (3956)
T ss_pred ceEEEeecCCCceeeeeEEEEEecCCcEEEEEEEec-----ccCCHHHHHHHHHHHHHHHHHHh----hCcccceecccc
Confidence 111123467899888877778888888 999 99999999999999999999974 444554554444
Q ss_pred CCCCCC-CCCCCCCCCCc---chHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCC
Q 004825 159 GENHLS-NPGGQWLPGAF---VNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDK 234 (728)
Q Consensus 159 ~~~~~~-~~~~~w~~~~~---~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~ 234 (728)
..+++. .....|+.... ....+++|.++++++||++|+++.++ ++||+||+++++++|++|++.|+++
T Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~ 561 (3956)
T PRK12467 490 LDAEERARELVRWNAPATEYAPDCVHQLIEAQARQHPERPALVFGEQ--------VLSYAELNRQANRLAHVLIAAGVGP 561 (3956)
T ss_pred CCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHCCCCeEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCC
Confidence 333322 23445664433 23456788889999999999999877 9999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEE
Q 004825 235 GSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIV 314 (728)
Q Consensus 235 gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (728)
|++|+|+++|++++++++|||+|+|++|||+||.+|.+++.+++++++++++|+++...... + .......+.
T Consensus 562 g~~V~i~~~~s~~~vv~~lail~aG~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~---~-----~~~~~~~~~ 633 (3956)
T PRK12467 562 DVLVGIAVERSIEMVVGLLAVLKAGGAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQL---P-----VPAGLRSLC 633 (3956)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHhCcEEeccCCCChHHHHHHHHHhcCCCEEEechhhhhhc---c-----cccCccEEE
Confidence 99999999999999999999999999999999999999999999999999999987432110 0 000011111
Q ss_pred EcCCCCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCC
Q 004825 315 IPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDI 394 (728)
Q Consensus 315 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~ 394 (728)
+.... +.... .....+.....++++|||+|||||||+||||+++|+++.+.+.+....+++
T Consensus 634 ~~~~~---------------~~~~~----~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~ 694 (3956)
T PRK12467 634 LDEPA---------------DLLCG----YSGHNPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQL 694 (3956)
T ss_pred ecccc---------------ccccc----cCCCCCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCC
Confidence 11100 00000 011112234568999999999999999999999999999999999899999
Q ss_pred CCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCC--CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcC
Q 004825 395 RKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGS--PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSS 472 (728)
Q Consensus 395 ~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~ 472 (728)
+++|++++++|++|+.+++++|.+|+.|+++++++.. .++..+++.|++++||++.++|++++.|++... .....+
T Consensus 695 ~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lv~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~ 772 (3956)
T PRK12467 695 AADDSMLMVSTFAFDLGVTELFGALASGATLHLLPPDCARDAEAFAALMADQGVTVLKIVPSHLQALLQASR--VALPRP 772 (3956)
T ss_pred CCCCEEEEecCccHhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHhhhc--cccCCc
Confidence 9999999999999999999999999999999998753 477889999999999999999999999987532 223567
Q ss_pred eeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccc---cccccccCCCCCceEEEEcCCCCccCCC
Q 004825 473 IRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQA---QSLAAFSTPAMGCKLFILGNDGCPIPQN 549 (728)
Q Consensus 473 lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~---~~~~~iG~p~~~~~v~i~d~~g~~vp~g 549 (728)
+|.+++|||++++++.+++.+.+++++++|.||+||+++.++....... ....++|+|++|++++|+|++++++|.|
T Consensus 773 lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~G 852 (3956)
T PRK12467 773 QRALVCGGEALQVDLLARVRALGPGARLINHYGPTETTVGVSTYELSDEERDFGNVPIGQPLANLGLYILDHYLNPVPVG 852 (3956)
T ss_pred ccEEEEEeecCCHHHHHHHHHhCCCCEEEeCcCCChhhhheeeEecccccccCCCCcccCCcCCCEEEEECCCCCCCCCC
Confidence 8999999999999999999887777899999999999976655433221 1236899999999999999999999999
Q ss_pred CCceeEEEEeccccCCCccccCccccccccccCCCC-CCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHH
Q 004825 550 VPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSR-NGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIE 628 (728)
Q Consensus 550 ~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~-~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE 628 (728)
+. |||+|++..+..+ |+++++.|+++|..+|+. +|.+||+|||+|++++||.|+|+||+|+|||++|+||+|+|||
T Consensus 853 ~~--GEL~i~G~~v~~G-Yl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~vki~G~rI~~~eIE 929 (3956)
T PRK12467 853 VV--GELYIGGAGLARG-YHRRPALTAERFVPDPFGADGGRLYRTGDLARYRADGVIEYLGRMDHQVKIRGFRIELGEIE 929 (3956)
T ss_pred Cc--eEEEecccccchh-hcCCccccHhhCcCCCCCCCCceeEecCceeEEcCCCcEEEeccccCeEEECCEecCHHHHH
Confidence 87 9999977766543 467889999999999974 6889999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCC
Q 004825 629 RICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATN 708 (728)
Q Consensus 629 ~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~G 708 (728)
++|. .||+|.+|+|++.++. .+ +.++||+++.. ...........+.|+++|++.||.||+|..|+++++||+|+||
T Consensus 930 ~~L~-~~p~V~~a~v~~~~~~-~~-~~lva~vv~~~-~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~G 1005 (3956)
T PRK12467 930 ARLL-AQPGVREAVVLAQPGD-AG-LQLVAYLVPAA-VADGAEHQATRDELKAQLRQVLPDYMVPAHLLLLDSLPLTPNG 1005 (3956)
T ss_pred HHHH-hCCCcceEEEEEEcCC-CC-cEEEEEEEecc-cccccccccCHHHHHHHHHhhCchhcCCceEeeecccCCCCCC
Confidence 9995 8999999999986543 34 68999999654 2111122234456777899999999999999999999999999
Q ss_pred chhHHHHHHHHH
Q 004825 709 KVMRRVLRKQLA 720 (728)
Q Consensus 709 KvdR~~L~~~~~ 720 (728)
|+||++|++...
T Consensus 1006 KidR~~L~~~~~ 1017 (3956)
T PRK12467 1006 KLDRKALPKPDA 1017 (3956)
T ss_pred CcCHhhcCCccc
Confidence 999999987643
No 6
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1e-80 Score=717.31 Aligned_cols=580 Identities=24% Similarity=0.376 Sum_probs=467.0
Q ss_pred CHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCCCCCCCCCCCCCCcchHhhhhcccccCCCCCCeEEE
Q 004825 118 SFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVIR 197 (728)
Q Consensus 118 ~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~~~pd~~Al~ 197 (728)
+|+.+++++++++..||.++++. +.|.+++.++++... .+..+||.++..|.++++|+++++++|+++|++
T Consensus 2 ~~~~~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~~-------~~~~~wf~~~~~n~~~~~l~~~~~~~p~~~Al~ 72 (628)
T TIGR02316 2 RYEEFYQRSIEQPEAFWAEQARR--IDWQTPPQRILDYSN-------PPFARWFAGGRTNLCHNALDRHLDERGEQLALV 72 (628)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHh--CCeecCCcccccCCC-------CCcCccCCCCEeeHHHHHHHHHhCcCCCCeEEE
Confidence 57889999999999999999998 579999998875422 346789999999999999999998999999999
Q ss_pred EeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q 004825 198 WCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISAR 277 (728)
Q Consensus 198 ~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~ 277 (728)
+.+. ..+..+++||+||+++++++|++|++.|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++
T Consensus 73 ~~~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~ 150 (628)
T TIGR02316 73 TVSS--ETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALR 150 (628)
T ss_pred EEcC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHH
Confidence 8542 11234589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCceEEEEecceecCCcccchHhhHh----h---cCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCcccc
Q 004825 278 LRISKAKAIFTQDLIIRGDKSIPLYRVID----A---QAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAA 350 (728)
Q Consensus 278 l~~~~~~~il~~~~~~~~~~~~~~~~~~~----~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (728)
+++++++++|+++...+.++.++....++ . ....+++++...... ........+|.++...... ...+.
T Consensus 151 l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~ 226 (628)
T TIGR02316 151 IDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPM-RLIPGRDVDYAALRTQHED---AQVPV 226 (628)
T ss_pred HHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc-CcccCccccHHHHhhcccc---CCCCc
Confidence 99999999999887666666555442221 1 123344443221110 0011124456665443211 11222
Q ss_pred ccCCCCCceEEEecCCCCCCCceEEecCcHHH-HHHHHHHHhcCCCCCCEEEecCCcchhhhH-HHHHHHhhhCcEEEEe
Q 004825 351 VEQPVEAFTNILFSSGTTGEPKAIPWTNATPF-KAAADAWCHMDIRKADIVAWPTNLGWMMGP-WLVYASLLNGASIALY 428 (728)
Q Consensus 351 ~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~-~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~ 428 (728)
....+++++||+|||||||.||||+++|++++ +........++++++|++++.++++|+++. +.++.+|+.|++++++
T Consensus 227 ~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~ 306 (628)
T TIGR02316 227 EWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLY 306 (628)
T ss_pred eecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEe
Confidence 33567999999999999999999999999975 444455566889999999999999999996 6789999999999999
Q ss_pred CCC---CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC--CCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEec
Q 004825 429 NGS---PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC--IDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEY 503 (728)
Q Consensus 429 ~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (728)
++. +++..++++|++++||++.++|++++.|.+... ....++++||.+++|||++++++.+++.+.++ ..+++.
T Consensus 307 ~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~-~~~~~~ 385 (628)
T TIGR02316 307 EGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGLG-KPVIDN 385 (628)
T ss_pred CCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHhC-CCEEec
Confidence 753 356789999999999999999999999987542 23456899999999999999999998887764 789999
Q ss_pred ccccccccccccCCcc---cccccccccCCCCCceEEEEcC-CCCccCCCCCceeEEEEecccc-CCCc-cccCccccc-
Q 004825 504 CGGTEIGGGFITGSLL---QAQSLAAFSTPAMGCKLFILGN-DGCPIPQNVPGMGELALSPLIF-GASS-TLLNANHYD- 576 (728)
Q Consensus 504 YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~v~i~d~-~g~~vp~g~~giGEl~v~~~~~-~~~~-~~~~~~~~~- 576 (728)
||+||++..++..... .....+++|+|++|++++|+|+ +|+++|.|+. |||+|.++.. +... ++++++.+.
T Consensus 386 yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~--Gel~v~gp~~~g~~~~~~~~~~~~~~ 463 (628)
T TIGR02316 386 YWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEK--GVLTVVPPLPPGCLSTVWGDDARFLK 463 (628)
T ss_pred ccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCc--EEEEEecCCCccccccccCChHHHHH
Confidence 9999998544332221 1234578899999999999998 6999999986 9999966532 2212 233444332
Q ss_pred cccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEE
Q 004825 577 VYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQL 656 (728)
Q Consensus 577 ~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l 656 (728)
.+|... +.+||+|||+|++|+||+++++||+||+||++|+||+|.|||++|. .||+|.+|+|++++++..| +.+
T Consensus 464 ~~~~~~----~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~-~~p~V~ea~Vvg~~d~~~g-~~~ 537 (628)
T TIGR02316 464 TYWSHF----KRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVS-SHPSVAEVAVVGVHDELKG-QVA 537 (628)
T ss_pred hhhhcC----CCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHH-hCCCcceEEEEeeecCCCC-eEE
Confidence 233222 2459999999999999999999999999999999999999999996 9999999999999998887 899
Q ss_pred EEEEEecCCCCCC---CCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhh
Q 004825 657 TIVVVFKDSNYTP---PDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 657 ~a~vv~~~~~~~~---~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 722 (728)
++||++++ +... .+...+.+.|+++++++|++||+|..|+++++||+|+|||++|+.|+++++..
T Consensus 538 ~~~vv~~~-~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~~ 605 (628)
T TIGR02316 538 VVFAILKE-SDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALAEGR 605 (628)
T ss_pred EEEEEEcC-CcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcCC
Confidence 99999876 4311 12346778899999999999999999999999999999999999999988653
No 7
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=3e-83 Score=801.73 Aligned_cols=673 Identities=15% Similarity=0.113 Sum_probs=516.4
Q ss_pred HHHHcCCChHHHHHHHHHHHHHHHhcCC--CChhhHHHHHHhhcCCCCCCccchhheeeecccCCCCCCCccCChhhhhh
Q 004825 16 DIEALGIPSKLAEQLHEKLAEIVNTHGA--ATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPDPPAWIPDPEAAKV 93 (728)
Q Consensus 16 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~--~hq~~pfe~lv~~l~~~r~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 93 (728)
..+++|+..++..+|.++|++++++.++ +||++||++|++.+++.|+.+++|.+ |+++|...+... ........+
T Consensus 80 ~~lplr~~~~~~~t~~~~l~~~~~~~~~~~~h~~~p~~~i~~~l~~~~~~~~~p~l-f~~~~~~~~~~~--~~~~~~~~~ 156 (1389)
T TIGR03443 80 RPFVLRLNITPELSFLQLYAKVSEEEKEGASDIGVPFDELSEHIQAAKKLERTPPL-FRLAFQDAPDNQ--QTTYSTGST 156 (1389)
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHhccccCCCCCCcc-EEEEeecCCccc--ccccccCCc
Confidence 3578999999999999999999999888 99999999999999999998888833 677665422110 011134467
Q ss_pred ccHHHHHHHhccccccCC-CCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCCCCCCC-----
Q 004825 94 TNVGKLLQTRGEEFLGSG-YKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPG----- 167 (728)
Q Consensus 94 ~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 167 (728)
+||.+.+.+.++++...+ |++ ++|++++++++.++|..+|+++. +.|+..+...++..+.+....
T Consensus 157 ~dl~~~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~f~~lL~~~~----~~p~~~l~~l~~~~~~~~~~~~~~~~ 227 (1389)
T TIGR03443 157 TDLTVFLTPSSPELELSIYYNS-----LLFSSDRITIVADQLAQLLSAAS----SNPDEPIGKVSLITPSQKSLLPDPTK 227 (1389)
T ss_pred cceEEEEEecCCcEEEEEEEch-----hcCCHHHHHHHHHHHHHHHHHHH----hCcCCceecccCCCHHHHhhhhcccc
Confidence 899888888788888888 999 99999999999999999999873 444444444333222211111
Q ss_pred -CCCCCCCcchHhhhhcccccCCCCCCeEEEEeccCC-CCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC
Q 004825 168 -GQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGD-GGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMN 245 (728)
Q Consensus 168 -~~w~~~~~~~~~~~~l~~~~~~~pd~~Al~~~~~~~-~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s 245 (728)
..|.. ......++|+++++++|+++|+++..... .....+++||+||+++++++|++|++.|+++|++|+|+++|+
T Consensus 228 ~~~~~~--~~~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~ 305 (1389)
T TIGR03443 228 DLDWSG--FRGAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRG 305 (1389)
T ss_pred ccCcCc--ccCcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCC
Confidence 23432 12346678899999999999998743210 011234899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhc-----CCcEEEEcCCCC
Q 004825 246 VNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQ-----APLAIVIPAKGS 320 (728)
Q Consensus 246 ~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~ 320 (728)
+++++++|||+|+|++|+|+||.+|.+++.+++++++++++|+..........+. ...... ....+.+.....
T Consensus 306 ~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 383 (1389)
T TIGR03443 306 VDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVR--DYIDKELELRTEIPALALQDDGS 383 (1389)
T ss_pred HHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhh--hhhhcccccccccceEEeccccc
Confidence 9999999999999999999999999999999999999999998764210000000 100000 000111111000
Q ss_pred CcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEE
Q 004825 321 SFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIV 400 (728)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~ 400 (728)
...... .....+....... ...........++++|||+|||||||.||||+++|+++++.+.+....+++.++|++
T Consensus 384 ~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~ 459 (1389)
T TIGR03443 384 LVGGSL---EGGETDVLAPYQA-LKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKF 459 (1389)
T ss_pred cccccc---ccccccccccccc-cccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEE
Confidence 000000 0000000000000 000111223467999999999999999999999999999999998889999999999
Q ss_pred EecCCcchhhhHHHHHHHhhhCcEEEEeCCCC--CcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEe
Q 004825 401 AWPTNLGWMMGPWLVYASLLNGASIALYNGSP--LGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGS 478 (728)
Q Consensus 401 l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~--~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~ 478 (728)
++.++++|+.+++++|.+|+.|+++++++... ++..+++.|++++||++.++|++++.|.... ...+++||.+++
T Consensus 460 ~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~ 536 (1389)
T TIGR03443 460 TMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFF 536 (1389)
T ss_pred EEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEE
Confidence 99999999999999999999999999986432 5668999999999999999999999987542 234789999999
Q ss_pred ecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCccc----------ccccccccCCCCCceEEEEcCC--CCcc
Q 004825 479 TGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQ----------AQSLAAFSTPAMGCKLFILGND--GCPI 546 (728)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~~~~v~i~d~~--g~~v 546 (728)
|||++++....++.+..++++++|.||+||+++.++...... .....++|+|++|++++|+|++ ++++
T Consensus 537 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~ 616 (1389)
T TIGR03443 537 VGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTC 616 (1389)
T ss_pred ecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcC
Confidence 999999999888887777889999999999987554322110 0124689999999999999975 5789
Q ss_pred CCCCCceeEEEEeccccCCCccccCccccccccccCCCC----------------------CCceeEEeCceEEEecCce
Q 004825 547 PQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSR----------------------NGQILRRHGDVFERTSGGY 604 (728)
Q Consensus 547 p~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~----------------------~g~~~y~TGDl~~~~~dG~ 604 (728)
|.|+. |||+|+++.+..+ |+++++.|+++|..+|+. ++.+||+|||+|++++||.
T Consensus 617 ~~G~~--GEL~i~G~~v~~G-Y~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~ 693 (1389)
T TIGR03443 617 GVGEV--GEIYVRAGGLAEG-YLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGN 693 (1389)
T ss_pred CCCCc--eEEEecccccchh-cCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCC
Confidence 99987 9999977766543 467889999999876531 2467999999999999999
Q ss_pred EEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCC-------------
Q 004825 605 YRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPD------------- 671 (728)
Q Consensus 605 l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~------------- 671 (728)
|+|+||.|||||++|+||+|.|||++|. +||.|.+++|++.+++..+ +.++||+++.. +.....
T Consensus 694 l~~~GR~dd~Iki~G~rI~p~eIE~~l~-~~p~V~~a~v~~~~~~~~~-~~lva~vv~~~-~~~~~~~~~~~~~~~~~~~ 770 (1389)
T TIGR03443 694 VECCGRADDQVKIRGFRIELGEIDTHLS-QHPLVRENVTLVRRDKDEE-PTLVSYIVPQD-KSDELEEFKSEVDDEESSD 770 (1389)
T ss_pred EEEecccCCEEEeCcEEecHHHHHHHHH-hCcchheeEEEEeeCCCCC-eEEEEEEeccC-ccccccccccccccccccc
Confidence 9999999999999999999999999995 8999999999988776665 89999999763 110000
Q ss_pred --------HHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHH
Q 004825 672 --------LNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRK 717 (728)
Q Consensus 672 --------~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 717 (728)
..+..+.++++++++||.||+|..|+++++||+|+||||||++|++
T Consensus 771 ~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~ 824 (1389)
T TIGR03443 771 PVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPF 824 (1389)
T ss_pred cchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCC
Confidence 1123567788899999999999999999999999999999999964
No 8
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1e-80 Score=719.25 Aligned_cols=583 Identities=25% Similarity=0.384 Sum_probs=467.3
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCc--eeecCCCCCCCCCCCCCCCCCCCCcchHhhhhcccccC-CCCCC
Q 004825 117 SSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQ--CILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSK-RSLDD 193 (728)
Q Consensus 117 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~-~~pd~ 193 (728)
.+|+.++++++++++.||.++.+.+ .|.+++. ++++.... -....+..+||.++..|.++++|+++++ .+|++
T Consensus 30 ~~y~~~~~~s~~~~~~fw~~~~~~~--~~~~~~~~~~v~~~~~~--~~~~~~~~~wf~g~~~N~~~~~l~~~~~~~~~~~ 105 (666)
T PLN02654 30 QQYMEMYKRSVDDPAGFWSDIASQF--YWKQKWEGDEVCSENLD--VRKGPISIEWFKGGKTNICYNCLDRNVEAGNGDK 105 (666)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhC--CeecCCCcceEeccCCC--cccCCccccccCCCEeeHHHHHHHHhhccCCCCC
Confidence 4689999999999999999999985 5777763 55532110 0001235799999999999999999886 58999
Q ss_pred eEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHH
Q 004825 194 IVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLE 273 (728)
Q Consensus 194 ~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~ 273 (728)
+|+++.+. ..+..+++||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++|++++|+++.++.++
T Consensus 106 ~Al~~~~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~ 183 (666)
T PLN02654 106 IAIYWEGN--EPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSAES 183 (666)
T ss_pred EEEEEEcC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHH
Confidence 99998543 1223458999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCceEEEEecceecCCcccchHhhHhh----c-----CC-cEEEEcCCCCC--cccc-cCCCCcCHHHHHHhh
Q 004825 274 ISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDA----Q-----AP-LAIVIPAKGSS--FSMK-LRDGDISWLDFLERV 340 (728)
Q Consensus 274 l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~----~-----~~-~~~~i~~~~~~--~~~~-~~~~~~~~~~~~~~~ 340 (728)
+.+++++++|+++|+++...+.++.+.....++. . .. .++........ .... .......|+++....
T Consensus 184 l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (666)
T PLN02654 184 LAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRDVWWQDVVPNY 263 (666)
T ss_pred HHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCcccHHHHhhcC
Confidence 9999999999999999887766665554422221 0 00 11111111000 0000 001234455554321
Q ss_pred hccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHH-HHHHHHHhcCCCCCCEEEecCCcchhhhH-HHHHHH
Q 004825 341 RKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFK-AAADAWCHMDIRKADIVAWPTNLGWMMGP-WLVYAS 418 (728)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (728)
+...+.....+++++||+|||||||.||||+++|++++. ........++++++|++++.+|++|.++. +.++++
T Consensus 264 ----~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 339 (666)
T PLN02654 264 ----PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGP 339 (666)
T ss_pred ----CCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHH
Confidence 111223346789999999999999999999999999764 34445567899999999999999999987 568899
Q ss_pred hhhCcEEEEeCCC---CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC--CCCCCCcCeeEEEeecCCCCHHHHHHHHh
Q 004825 419 LLNGASIALYNGS---PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC--IDGYDWSSIRCFGSTGEASNVDEYLWLMG 493 (728)
Q Consensus 419 L~~G~~lvl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~~lr~i~~gGe~l~~~~~~~~~~ 493 (728)
|+.|++++++++. +++..++++|++++||++.++|++++.|++... ....++++||.++++||+++++.++++.+
T Consensus 340 L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~ 419 (666)
T PLN02654 340 MLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFN 419 (666)
T ss_pred HHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHH
Confidence 9999999999864 367789999999999999999999999987643 23457889999999999999999999998
Q ss_pred ccCC--CCeEecccccccccccccCCcc-cccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCcc-c
Q 004825 494 RALY--KPVIEYCGGTEIGGGFITGSLL-QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASST-L 569 (728)
Q Consensus 494 ~~~~--~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~-~ 569 (728)
.++. +++.+.||+||+++..+...+. .+..++++|+|++|++++|+|++|++++.|+. |||+|.+++.+...+ +
T Consensus 420 ~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~~--Gel~v~~~~p~~~~gy~ 497 (666)
T PLN02654 420 VVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGKEIEGECS--GYLCVKKSWPGAFRTLY 497 (666)
T ss_pred HhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEECCCCCCCCCCCc--eEEEEcCCCchhhhhhc
Confidence 8764 6899999999998755443331 23456789999999999999999999998875 999997643333333 4
Q ss_pred cCcccccc-ccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecC
Q 004825 570 LNANHYDV-YFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPP 648 (728)
Q Consensus 570 ~~~~~~~~-~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~ 648 (728)
++++.+.+ +|... +| ||+|||+|++|+||+++++||+||+||++|+||+|.|||++|. .||+|.+++|+++++
T Consensus 498 ~~~~~~~~~~~~~~---~g--~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~-~~p~V~eaaVvg~~d 571 (666)
T PLN02654 498 GDHERYETTYFKPF---AG--YYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALV-SHPQCAEAAVVGIEH 571 (666)
T ss_pred CChHHHHHhhhhcC---CC--EEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHH-hCCCeeeEEEEeeEc
Confidence 45555543 33322 24 9999999999999999999999999999999999999999996 999999999999999
Q ss_pred CCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 649 PDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 649 ~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+..| +.+++||++++ +. . ..+++++.|+++++++|++|++|..|+++++||+|+|||++|+.|++.+..
T Consensus 572 ~~~g-e~~~a~Vvl~~-~~-~-~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~ 640 (666)
T PLN02654 572 EVKG-QGIYAFVTLVE-GV-P-YSEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 640 (666)
T ss_pred CCCC-eEEEEEEEECC-CC-C-CCHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcC
Confidence 8887 89999999987 54 2 235788889999999999999999999999999999999999999999865
No 9
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-80 Score=716.69 Aligned_cols=607 Identities=26% Similarity=0.401 Sum_probs=486.5
Q ss_pred CCCccCChhhhhhccHHHHHHHhccccccCCCCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCC
Q 004825 81 PPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGE 160 (728)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (728)
+++|.|+.+....++|+.+....... |+..+.+|+.+++++++++..||..+++...+.|.++++.+++...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~~--- 74 (655)
T PRK03584 3 DPLWTPSAERIAASRMTAFIRWLAAR-----RGLSFDDYAALWRWSVEDLEAFWQSVWDFFGVIGSTPYTVVLAGRR--- 74 (655)
T ss_pred CCCCCCChhhcccchHHHHHHHHHHH-----hCCChHhHHHHHHHHHhCHHHHHHHHHHhcCceecCCCcEeecCCC---
Confidence 45888887777778888775553322 3444568899999999999999999999877789988888865422
Q ss_pred CCCCCCCCCCCCCCcchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 004825 161 NHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAI 240 (728)
Q Consensus 161 ~~~~~~~~~w~~~~~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai 240 (728)
.+..+||.++..|.+++++++ .+|+++|+++.+. .+..+++||+||.++++++|+.|++.|+++||+|+|
T Consensus 75 ----~~~~~wf~~~~~n~~~~~~~~---~~~~~~Al~~~~~---~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i 144 (655)
T PRK03584 75 ----MPGARWFPGARLNYAENLLRH---RRDDRPAIIFRGE---DGPRRELSWAELRRQVAALAAALRALGVGPGDRVAA 144 (655)
T ss_pred ----CCCCeeCCCCEeeHHHHhhcc---CCCCCeEEEEECC---CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 245789999999999999974 5799999998764 233568999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhh----HhhcC--CcEEE
Q 004825 241 DMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRV----IDAQA--PLAIV 314 (728)
Q Consensus 241 ~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~----~~~~~--~~~~~ 314 (728)
+++|++++++++|||+++|++++|++|.++.+++.+++++++++++|+++....+++.+..... ..... ..+++
T Consensus 145 ~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 224 (655)
T PRK03584 145 YLPNIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVV 224 (655)
T ss_pred EcCCCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEE
Confidence 9999999999999999999999999999999999999999999999999876655555444321 12222 13444
Q ss_pred EcCCCCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHH-HHHHHHHHhcC
Q 004825 315 IPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPF-KAAADAWCHMD 393 (728)
Q Consensus 315 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~-~~~~~~~~~~~ 393 (728)
++................|.++..... ..........+++++||+|||||||.||||+++|++++ +.+......++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~ 301 (655)
T PRK03584 225 VPYLGPAAAAAALPGALLWEDFLAPAE---AAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCD 301 (655)
T ss_pred EecCCCcccccccCCcccHHHHhhccc---cCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcC
Confidence 433221111111223456777655211 11222345677999999999999999999999999875 44556666789
Q ss_pred CCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCC---CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC--CCCC
Q 004825 394 IRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGS---PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC--IDGY 468 (728)
Q Consensus 394 ~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~ 468 (728)
+.++|+++++++++|+++. .++.+|+.|++++++++. +++..++++|+++++|++.++|++++.+.+... ....
T Consensus 302 ~~~~d~~~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~ 380 (655)
T PRK03584 302 LGPGDRFFWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETH 380 (655)
T ss_pred CCCCCEEEEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccC
Confidence 9999999999999998654 366899999999998753 367789999999999999999999999976532 2345
Q ss_pred CCcCeeEEEeecCCCCHHHHHHHHhccC-CCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccC
Q 004825 469 DWSSIRCFGSTGEASNVDEYLWLMGRAL-YKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIP 547 (728)
Q Consensus 469 ~l~~lr~i~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp 547 (728)
++++||.+++|||++++++.+++.+.++ +..+.+.||+||++..+.......+...+++|.|.+|++++|+|++|+++
T Consensus 381 ~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~~ivd~~g~~~- 459 (655)
T PRK03584 381 DLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAVEAWDEDGRPV- 459 (655)
T ss_pred ChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCceeEEECCCCCCC-
Confidence 6889999999999999999999988773 57899999999987554433333344567899999999999999999999
Q ss_pred CCCCceeEEEEeccccCCCcccc-Ccccc---ccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeec
Q 004825 548 QNVPGMGELALSPLIFGASSTLL-NANHY---DVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVS 623 (728)
Q Consensus 548 ~g~~giGEl~v~~~~~~~~~~~~-~~~~~---~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~ 623 (728)
.|+. |||+|.++..+...+|+ +++.+ ..+|...+ | ||+|||+|++|+||+++|+||+||+||++|+||+
T Consensus 460 ~g~~--GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~---g--~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~ 532 (655)
T PRK03584 460 VGEV--GELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFP---G--VWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIG 532 (655)
T ss_pred CCCc--eEEEEccCCCCCcceeeCCCccchHHHhhhccCC---C--EeecCCeEEECCCCeEEEEeeccCeeecCcEEEC
Confidence 6775 99999765433333344 44432 23343322 3 8999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCC
Q 004825 624 SVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLP 703 (728)
Q Consensus 624 ~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP 703 (728)
|.|||++|. .||+|.+|+|++.+++..+ +.+++||++++ +. . ..+++++.|+++++++|++||+|..|+++++||
T Consensus 533 p~EIE~~l~-~~p~V~ea~vvg~~~~~~g-~~~~a~vv~~~-~~-~-~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP 607 (655)
T PRK03584 533 TAEIYRQVE-ALPEVLDSLVIGQEWPDGD-VRMPLFVVLAE-GV-T-LDDALRARIRTTIRTNLSPRHVPDKIIAVPDIP 607 (655)
T ss_pred HHHHHHHHH-hCCCcceEEEEeeEcCCCC-EEEEEEEEECC-CC-C-CcHHHHHHHHHHHHhhCCCCcCCCEEEECCCCC
Confidence 999999995 9999999999999998777 89999999987 54 2 335677788999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHhh
Q 004825 704 RTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 704 ~t~~GKvdR~~L~~~~~~~ 722 (728)
+|+||||+|+.|++++...
T Consensus 608 ~t~sGKi~r~~lr~~~~~~ 626 (655)
T PRK03584 608 RTLSGKKVELPVKKLLHGR 626 (655)
T ss_pred CCCCccchHHHHHHHHcCC
Confidence 9999999999999988753
No 10
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=3e-80 Score=714.49 Aligned_cols=580 Identities=27% Similarity=0.428 Sum_probs=473.1
Q ss_pred CCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCCCCCCCCCCCCCCcchHhhhhcccccCCCCCCeE
Q 004825 116 ISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIV 195 (728)
Q Consensus 116 ~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~~~pd~~A 195 (728)
+.+|+.++++++++++.||..+++. .+.|.+++.++++... .+..+||.++..|.++++|+++++++|+++|
T Consensus 4 ~~~y~~~~~~s~~~~~~fw~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~wf~~~~~n~~~~~l~~~~~~~p~~~A 75 (625)
T TIGR02188 4 LEQYKELYEESIEDPDKFWAKLARE-LLDWFKPFTKVLDWSF-------PPFYKWFVGGELNVSYNCVDRHLEARPDKVA 75 (625)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHh-cCceecCCceeecCCC-------CCCCeeCCCCEEEHHHHHHHHhhccCCCCeE
Confidence 4578999999999999999999988 4579999998875432 3468999999999999999999999999999
Q ss_pred EEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHH
Q 004825 196 IRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEIS 275 (728)
Q Consensus 196 l~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~ 275 (728)
+++.+. ..+..+++||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++|++++|++|+++.+++.
T Consensus 76 l~~~~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~ 153 (625)
T TIGR02188 76 IIWEGD--EPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALA 153 (625)
T ss_pred EEEEcC--CCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHH
Confidence 998654 123356899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCceEEEEecceecCCcccchHhh----HhhcC---CcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCcc
Q 004825 276 ARLRISKAKAIFTQDLIIRGDKSIPLYRV----IDAQA---PLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEF 348 (728)
Q Consensus 276 ~~l~~~~~~~il~~~~~~~~~~~~~~~~~----~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (728)
+++++++++++|+++...++++.++.... +...+ ..++++........ ........|.++..... ...
T Consensus 154 ~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~ 228 (625)
T TIGR02188 154 DRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVP-WVEGRDVWWHDLMAKAS----AYC 228 (625)
T ss_pred HHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcC-ccccccccHHHHHhhcC----CCC
Confidence 99999999999999887766665554422 22222 12333332221111 01112345666654322 122
Q ss_pred ccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHH-HHHHHhcCCCCCCEEEecCCcchhhhH-HHHHHHhhhCcEEE
Q 004825 349 AAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAA-ADAWCHMDIRKADIVAWPTNLGWMMGP-WLVYASLLNGASIA 426 (728)
Q Consensus 349 ~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv 426 (728)
.+....+++++||+|||||||.||||+++|++++... ......++++++|++++.++++|.++. +.++.+|..|++++
T Consensus 229 ~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~v 308 (625)
T TIGR02188 229 EPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTV 308 (625)
T ss_pred CceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEE
Confidence 3345678999999999999999999999999976543 334456789999999999999999887 67899999999999
Q ss_pred EeCCC---CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCC--CCCCCcCeeEEEeecCCCCHHHHHHHHhccC--CCC
Q 004825 427 LYNGS---PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCI--DGYDWSSIRCFGSTGEASNVDEYLWLMGRAL--YKP 499 (728)
Q Consensus 427 l~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~--~~~ 499 (728)
++++. +++..+++.|++++||++.++|++++.|.+.... ...++++||.+++|||++++++++++.+.++ +++
T Consensus 309 l~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~ 388 (625)
T TIGR02188 309 MFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCP 388 (625)
T ss_pred EECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCc
Confidence 98754 3678899999999999999999999999876432 3356889999999999999999999988775 378
Q ss_pred eEecccccccccccccCCcc-cccccccccCCCCCceEEEEcCCCCccC-CCCCceeEEEEeccccCCCcc-ccCccccc
Q 004825 500 VIEYCGGTEIGGGFITGSLL-QAQSLAAFSTPAMGCKLFILGNDGCPIP-QNVPGMGELALSPLIFGASST-LLNANHYD 576 (728)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~i~d~~g~~vp-~g~~giGEl~v~~~~~~~~~~-~~~~~~~~ 576 (728)
++|.||+||+++.++..... .+..++++|+|++|++++|+|++|++++ +|+. |||+|.+++.+...+ +++++.+.
T Consensus 389 i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~~--GeL~v~~p~p~~~~gy~~~~~~~~ 466 (625)
T TIGR02188 389 IVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVDEEGNPVEGPGEG--GYLVIKQPWPGMLRTIYGDHERFV 466 (625)
T ss_pred eEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEECCCCCCCCCCCCe--EEEEEccCCCcccccccCChHHHH
Confidence 99999999998765443221 2345678999999999999999999999 8886 999997654333333 44444443
Q ss_pred cccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEE
Q 004825 577 VYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQL 656 (728)
Q Consensus 577 ~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l 656 (728)
..|.. ..+| ||+|||+|++++||+++++||+||+||++|+||+|.|||++|. .||+|.+|+|++.+++..| +.+
T Consensus 467 ~~~~~--~~~g--~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~-~~p~V~e~~vvg~~~~~~g-~~~ 540 (625)
T TIGR02188 467 DTYFS--PFPG--YYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALV-SHPAVAEAAVVGIPDDIKG-QAI 540 (625)
T ss_pred HHHhc--cCCC--EEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-eEE
Confidence 33321 1124 9999999999999999999999999999999999999999996 8999999999999998877 899
Q ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 657 TIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 657 ~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
++||++.+ +. ....++.+.|+++++++|+++++|..|+++++||+|+|||++|+.|++++..
T Consensus 541 ~a~vv~~~-~~--~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~ 602 (625)
T TIGR02188 541 YAFVTLKD-GY--EPDDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAG 602 (625)
T ss_pred EEEEEeCC-CC--CCCHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcC
Confidence 99999987 54 2334577788889999999999999999999999999999999999999865
No 11
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.8e-83 Score=866.90 Aligned_cols=632 Identities=19% Similarity=0.205 Sum_probs=524.8
Q ss_pred HHHcCCChHHHHHHHHHHHHHHHhcCC--CChhhHHHHHHhhcCCCCCCccchhheeeecccCCCC--CCCc--------
Q 004825 17 IEALGIPSKLAEQLHEKLAEIVNTHGA--ATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPD--PPAW-------- 84 (728)
Q Consensus 17 ~~~~~~~~~~~~~f~~~l~~~~~~~~~--~hq~~pfe~lv~~l~~~r~~~~~~~~f~~~~~~~~~~--~~~~-------- 84 (728)
.+++|+..+.+.+|.++|+++.+...+ +||++||++|++.+++.|+.+++|+ |+++|++.+. ....
T Consensus 2890 tlPlrv~l~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~iv~~l~~~r~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~~~ 2967 (5163)
T PRK12316 2890 TQVLRAQVDAQLAFRDLLGQVKEQALGAQAHQDLPFEQLVEALQPERSLSHSPL--FQVMYNHQSGERAAAQLPGLHIES 2967 (5163)
T ss_pred ceeEEEecCCCCCHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhccccccCCCCc--eeEEEeeeccccccccCCCceeEe
Confidence 478889999999999999999998877 9999999999999999999999999 9999988221 1000
Q ss_pred cCChhhhhhccHHHHHHHhccccccCC-CCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCCC
Q 004825 85 IPDPEAAKVTNVGKLLQTRGEEFLGSG-YKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHL 163 (728)
Q Consensus 85 ~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (728)
........++||.+.+.+.++++...+ |++ ++|++++++++..+|..+|+++. +.++..+...++..+++
T Consensus 2968 ~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~~~~~~~i~~l~~~f~~lL~~l~----~~p~~~i~~l~~~~~~~ 3038 (5163)
T PRK12316 2968 FAWDGAATQFDLALDTWESAEGLGASLTYAT-----DLFDARTVERLARHWQNLLRGMV----ENPQRSVDELAMLDAEE 3038 (5163)
T ss_pred eeccCCccceeeEEEEEecCCcEEEEEEECc-----CCCCHHHHHHHHHHHHHHHHHHH----hCCCCchhhccCCCHHH
Confidence 111124567899888877777888888 999 99999999999999999999984 34444444444333322
Q ss_pred C-CCCCCCCCCCcc----hHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEE
Q 004825 164 S-NPGGQWLPGAFV----NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAI 238 (728)
Q Consensus 164 ~-~~~~~w~~~~~~----~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V 238 (728)
. .....|+..... ...+++|.++++++|+++|+++.++ .+||+||+++++++|++|++.|+++|++|
T Consensus 3039 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~--------~lTY~eL~~~~~~lA~~L~~~gv~~~~~V 3110 (5163)
T PRK12316 3039 RGQLLEAWNATAAEYPLERGVHRLFEEQVERTPDAVALAFGEQ--------RLSYAELNRRANRLAHRLIERGVGPDVLV 3110 (5163)
T ss_pred HHHHHHHhCCCCcCCCCcCCHHHHHHHHHHhCCCCeeEeeCCe--------EEeHHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 2 223456654322 3467788999999999999999887 99999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCC
Q 004825 239 AIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAK 318 (728)
Q Consensus 239 ai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 318 (728)
+|+++||+++++++|||+|+|++||||||++|.+|+.+++++++++++|++.... ++. ......+.++..
T Consensus 3111 ~l~~~~s~~~iv~~lail~aGa~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~-----~~~-----~~~~~~~~~~~~ 3180 (5163)
T PRK12316 3111 GVAVERSLEMVVGLLAILKAGGAYVPLDPEYPEERLAYMLEDSGAQLLLSQSHLR-----LPL-----AQGVQVLDLDRG 3180 (5163)
T ss_pred EEEccCCHHHHHHHHHHHHhCceeeecCCCCcHHHHHHHHHhcCCCEEEeCcccc-----CCc-----cCCccEEEeccc
Confidence 9999999999999999999999999999999999999999999999999986430 000 001112222111
Q ss_pred CCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCC
Q 004825 319 GSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKAD 398 (728)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d 398 (728)
.. . .....+.....++++|||+|||||||+||||+++|+++.+.+.+....++++++|
T Consensus 3181 ~~------------------~----~~~~~~~~~~~~~~~ayii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d 3238 (5163)
T PRK12316 3181 DE------------------N----YAEANPAIRTMPENLAYVIYTSGSTGKPKGVGIRHSALSNHLCWMQQAYGLGVGD 3238 (5163)
T ss_pred cc------------------c----ccccCCCCCCCCCCeEEEEeCCCCCCCCCEEEEccHHHHHHHHHHHHhhCCCccc
Confidence 00 0 0011122345679999999999999999999999999999999999999999999
Q ss_pred EEEecCCcchhhhHHHHHHHhhhCcEEEEeCCC--CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEE
Q 004825 399 IVAWPTNLGWMMGPWLVYASLLNGASIALYNGS--PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCF 476 (728)
Q Consensus 399 ~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i 476 (728)
+++++++++||.+++++|.+|+.|+++++.+.. .++..+.+.++++++|++.++|+++..+++.. ....++++|.+
T Consensus 3239 ~~l~~~~~~fd~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ps~~~~l~~~~--~~~~~~~lr~~ 3316 (5163)
T PRK12316 3239 RVLQFTTFSFDVFVEELFWPLMSGARVVLAGPEDWRDPALLVELINSEGVDVLHAYPSMLQAFLEEE--DAHRCTSLKRI 3316 (5163)
T ss_pred EEEeecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCcEEEcCHHHHHHHHhcc--ccccCCcceEE
Confidence 999999999999999999999999999998643 35678999999999999999999999987653 23346789999
Q ss_pred EeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcc-cccccccccCCCCCceEEEEcCCCCccCCCCCceeE
Q 004825 477 GSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLL-QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGE 555 (728)
Q Consensus 477 ~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGE 555 (728)
++|||++++++.++|.. +.+++|.||+||+++.++..... ......+||+|++|++++|+|++++++|.|++ ||
T Consensus 3317 ~~gGe~l~~~~~~~~~~---~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~--GE 3391 (5163)
T PRK12316 3317 VCGGEALPADLQQQVFA---GLPLYNLYGPTEATITVTHWQCVEEGKDAVPIGRPIANRACYILDGSLEPVPVGAL--GE 3391 (5163)
T ss_pred EEccccCCHHHHHHHHh---CCcEeeccCCCccEeeEeEEeccCCCCCCCccceecCCCEEEEECCCCCCCCCCCC--ce
Confidence 99999999999998873 47799999999999876654432 22345799999999999999999999999987 99
Q ss_pred EEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCC
Q 004825 556 LALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVD 635 (728)
Q Consensus 556 l~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~ 635 (728)
|+|++..+..+ |+++++.|+++|+.+|+.+|.|||+|||+|||++||.|+|+||+|+|||++|+||+|+|||++|. .|
T Consensus 3392 l~i~G~~v~~G-Y~~~~~~t~~~f~~~p~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~qvKi~G~rIel~eIE~~l~-~~ 3469 (5163)
T PRK12316 3392 LYLGGEGLARG-YHNRPGLTAERFVPDPFVPGERLYRTGDLARYRADGVIEYIGRVDHQVKIRGFRIELGEIEARLL-EH 3469 (5163)
T ss_pred EEecccccchh-cCCChhhchhhCCCCCCCCCCeeEecCceEEECCCCCEEEecccCCeEeeCcEeeChHHHHHHHH-hC
Confidence 99987776654 46788999999999999889999999999999999999999999999999999999999999995 99
Q ss_pred CCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHH
Q 004825 636 SNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVL 715 (728)
Q Consensus 636 p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L 715 (728)
|+|.+|+|++.. + ++++|||++.. +. ....+.|+++|+++||.||+|..|+.+++||+|+|||+||++|
T Consensus 3470 ~~V~~a~v~~~~----~-~~l~a~vv~~~-~~-----~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKvdr~~L 3538 (5163)
T PRK12316 3470 PWVREAVVLAVD----G-RQLVAYVVPED-EA-----GDLREALKAHLKASLPEYMVPAHLLFLERMPLTPNGKLDRKAL 3538 (5163)
T ss_pred CCcceEEEEEcc----C-CeEEEEEEcCC-cC-----cccHHHHHHHHHhhCCcccCcceeeeHhhcCCCCCcchhHHhc
Confidence 999999998764 3 68999999865 22 1223456668899999999999999999999999999999999
Q ss_pred HHHH
Q 004825 716 RKQL 719 (728)
Q Consensus 716 ~~~~ 719 (728)
++..
T Consensus 3539 ~~~~ 3542 (5163)
T PRK12316 3539 PRPD 3542 (5163)
T ss_pred CCCc
Confidence 7644
No 12
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.3e-79 Score=709.07 Aligned_cols=605 Identities=25% Similarity=0.389 Sum_probs=482.5
Q ss_pred CCCccCChhhhhhccHHHHHHHhccccccCCCCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCC
Q 004825 81 PPAWIPDPEAAKVTNVGKLLQTRGEEFLGSGYKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGE 160 (728)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (728)
.++|.|+.+....++|..+.+..... |+..+.+|+.++++|++++..||..+++.+.+.|.+++.++++...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~~--- 75 (652)
T TIGR01217 4 QPLWQPDAQRIAQARMTRFQAWAGEH-----HGAAEGGYDALHRWSVDELDTFWKAVWEWFDVRFSTPCARVVDDRT--- 75 (652)
T ss_pred CCCCCCChhhcccchHHHHHHHHHHh-----hCCChhhHHHHHHHHHhCHHHHHHHHHHhCCcceeCCCceeeeCCC---
Confidence 45888887777778888776554432 4445568899999999999999999999988899999999986422
Q ss_pred CCCCCCCCCCCCCCcchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 004825 161 NHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAI 240 (728)
Q Consensus 161 ~~~~~~~~~w~~~~~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai 240 (728)
....+||.++..|.+++++++ .++++|+++.+.+ +..+++||+||.++++++|+.|+++|+++||+|+|
T Consensus 76 ----~~~~~wf~~~~~n~~~~~~~~----~~~~~a~~~~~~~---~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i 144 (652)
T TIGR01217 76 ----MPGAQWFPGARLNYAENLLRA----AGTEPALLYVDET---HEPAPVTWAELRRQVASLAAALRALGVRPGDRVSG 144 (652)
T ss_pred ----CCCCEECCCCeeeHHHHHhcc----CCCCeEEEEECCC---CCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 345789999999999999984 4689999997652 33468999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhh----HhhcC--CcEEE
Q 004825 241 DMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRV----IDAQA--PLAIV 314 (728)
Q Consensus 241 ~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~----~~~~~--~~~~~ 314 (728)
+++|++++++++|||+++|++++|++|.++.+++.+++++++|+++|+++...++++....... ....+ ..+++
T Consensus 145 ~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~ 224 (652)
T TIGR01217 145 YLPNIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVH 224 (652)
T ss_pred EcCCCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEE
Confidence 9999999999999999999999999999999999999999999999999887766666554422 22222 22344
Q ss_pred EcCCCCCc-ccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHH-HHHHHHHHhc
Q 004825 315 IPAKGSSF-SMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPF-KAAADAWCHM 392 (728)
Q Consensus 315 i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~-~~~~~~~~~~ 392 (728)
++...... ......+...|+++...... .........++++++|+|||||||.||||+++|++++ +.+......+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~ 301 (652)
T TIGR01217 225 IPYLGPRETEAPKIDGALDLEDFTAAAQA---AELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC 301 (652)
T ss_pred EeCCCCcccccccccCcccHHHHHhcccC---CCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc
Confidence 43221100 00011234567776543211 1112234567999999999999999999999999865 4455555668
Q ss_pred CCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCC---CcchHHHHHHHhCCcEEEecHHHHHHHHcCCC--CCC
Q 004825 393 DIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSP---LGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC--IDG 467 (728)
Q Consensus 393 ~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~---~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~ 467 (728)
+++++|+++++++++|+++.+ ++.+|+.|++++++++.+ ++..+++++++++||++..+|++++.+..... ...
T Consensus 302 ~~~~~d~~~~~~~~~~~~~~~-~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~ 380 (652)
T TIGR01217 302 DLGPGDRLFYYTTTGWMMWNW-LVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPART 380 (652)
T ss_pred CCCCCcEEEEeCCcchhhhHH-HHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCcccc
Confidence 899999999999999987544 558999999999997543 56789999999999999999998888765421 234
Q ss_pred CCCcCeeEEEeecCCCCHHHHHHHHhccC-CCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCcc
Q 004825 468 YDWSSIRCFGSTGEASNVDEYLWLMGRAL-YKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPI 546 (728)
Q Consensus 468 ~~l~~lr~i~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~v 546 (728)
.++++||.+++|||+++++..+++.+.++ +..+.+.||+||++.++....+..+...+++|.|.+|++++|+|++|+++
T Consensus 381 ~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd~~g~~~ 460 (652)
T TIGR01217 381 HDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTAVQSWDPEGKPV 460 (652)
T ss_pred CChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCceEEECCCCCCC
Confidence 67899999999999999999999887764 34678999999976544433333334457899999999999999999998
Q ss_pred CCCCCceeEEEEeccccCCCcc-ccCccccc---cccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceee
Q 004825 547 PQNVPGMGELALSPLIFGASST-LLNANHYD---VYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKV 622 (728)
Q Consensus 547 p~g~~giGEl~v~~~~~~~~~~-~~~~~~~~---~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri 622 (728)
+ |+. |||++.++..+...+ +++++.++ .+|...+ | ||+|||+|++|+||+++++||+||+||++|+||
T Consensus 461 ~-g~~--GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~---g--~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri 532 (652)
T TIGR01217 461 T-GEV--GELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYP---G--VWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRM 532 (652)
T ss_pred C-CCc--cEEEEecCCCccccceeCCCccchhHHhhhcCCC---C--EEEcCCcEEECCCCcEEEEecccCeEecCCEEc
Confidence 4 775 999997654333333 44444332 3443322 3 899999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCC
Q 004825 623 SSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSL 702 (728)
Q Consensus 623 ~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~l 702 (728)
+|.|||++|. .||+|.+|+|++++++..| +.++|||++++ +. . ..+++.++|+++++++|++|++|+.|+++++|
T Consensus 533 ~p~EIE~~l~-~~p~V~eaavvg~~~~~~g-e~~~afVv~~~-~~-~-~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~l 607 (652)
T TIGR01217 533 GSAEIYNAVE-RLDEVRESLCIGQEQPDGG-YRVVLFVHLAP-GA-T-LDDALLDRIKRTIRAGLSPRHVPDEIIEVPGI 607 (652)
T ss_pred CHHHHHHHHH-hCCCcceEEEEeeecCCCC-EEEEEEEEECC-CC-C-CCHHHHHHHHHHHHhhCCCCcCCCEEEECCCC
Confidence 9999999996 9999999999999998877 89999999987 54 2 23567778899999999999999999999999
Q ss_pred CCCCCCchhHHHHHHHHHh
Q 004825 703 PRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 703 P~t~~GKvdR~~L~~~~~~ 721 (728)
|+|+||||+|+.|++.+..
T Consensus 608 P~T~sGKi~r~~Lr~~~~~ 626 (652)
T TIGR01217 608 PHTLTGKRVEVAVKRVLQG 626 (652)
T ss_pred CCCCCccChHHHHHHHHcC
Confidence 9999999999999998754
No 13
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=6.3e-83 Score=861.71 Aligned_cols=641 Identities=19% Similarity=0.199 Sum_probs=528.5
Q ss_pred HHHcCCChHHHHHHHHHHHHHHHhcCC--CChhhHHHHHHhhcCCCCCCccchhheeeecccCCCC-----CC-------
Q 004825 17 IEALGIPSKLAEQLHEKLAEIVNTHGA--ATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPD-----PP------- 82 (728)
Q Consensus 17 ~~~~~~~~~~~~~f~~~l~~~~~~~~~--~hq~~pfe~lv~~l~~~r~~~~~~~~f~~~~~~~~~~-----~~------- 82 (728)
.+++++..+++.+|.++|+++++.... +||++||++||+.|++.|+.+++|+ ||++|++.+. ..
T Consensus 341 ~lplr~~~~~~~tf~~~l~~v~~~~~~a~~hq~~p~~~iv~~l~~~r~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~~~ 418 (5163)
T PRK12316 341 TQVLRSVFDGRTRVATLLAGVKDTVLGAQAHQDLPFERLVEALKVERSLSHSPL--FQVMYNHQPLVADIEALDTVAGLE 418 (5163)
T ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHhCCCCCCCCCCc--EEEEEEeecccccccccccCCCce
Confidence 468889999999999999999998876 9999999999999999999999999 9999986321 00
Q ss_pred -CccCChhhhhhccHHHHHHHhccccccCC-CCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCC
Q 004825 83 -AWIPDPEAAKVTNVGKLLQTRGEEFLGSG-YKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGE 160 (728)
Q Consensus 83 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (728)
...+......++||.+.+.+.++++.+.+ |++ ++|++++++++.++|..+|+++. +.++..+...++..
T Consensus 419 ~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~lf~~~~i~~l~~~~~~lL~~i~----~~p~~~i~~l~~~~ 489 (5163)
T PRK12316 419 FGQLEWKSRTTQFDLTLDTYEKGGRLHAALTYAT-----DLFEARTVERMARHWQNLLRGMV----ENPQARVDELPMLD 489 (5163)
T ss_pred EEeeccCCCccceeEEEEEEEcCCcEEEEEEEch-----hhCCHHHHHHHHHHHHHHHHHHH----hccccccccCCCCC
Confidence 00111224467899888888888888888 999 99999999999999999999973 44555555544333
Q ss_pred CCCC-CCCCCCCCCCc----chHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCC
Q 004825 161 NHLS-NPGGQWLPGAF----VNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKG 235 (728)
Q Consensus 161 ~~~~-~~~~~w~~~~~----~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g 235 (728)
+++. .....|+.... .....++|.++++++|+++|+++.++ ++||+||+++++++|+.|++.|+++|
T Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~A~~~~~~--------~~TY~eL~~~~~~lA~~L~~~gv~~g 561 (5163)
T PRK12316 490 AEERGQLVEGWNATAAEYPLQRGVHRLFEEQVERTPEAPALAFGEE--------TLDYAELNRRANRLAHALIERGVGPD 561 (5163)
T ss_pred HHHHHHHHHHhcCccccCCCCCCHHHHHHHHHHHCCCCeEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCCC
Confidence 3222 22234543322 23467888999999999999999877 99999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEE
Q 004825 236 SAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVI 315 (728)
Q Consensus 236 d~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i 315 (728)
++|+|+++|++++++++|||+|+|++|||+||.+|.+++.+++++++++++|++......... ......+.+
T Consensus 562 ~~V~l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~ 633 (5163)
T PRK12316 562 VLVGVAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPL--------AAGVQVLDL 633 (5163)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCc--------ccCceEEEe
Confidence 999999999999999999999999999999999999999999999999999998753211000 001111222
Q ss_pred cCCCCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCC
Q 004825 316 PAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIR 395 (728)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~ 395 (728)
+... .+ ... ...........++++|||+|||||||+||||+++|+++++.+.+....++++
T Consensus 634 ~~~~------------~~---~~~----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~ 694 (5163)
T PRK12316 634 DRPA------------AW---LEG----YSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLG 694 (5163)
T ss_pred cCcc------------hh---hcc----CCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCC
Confidence 1100 00 000 0111122345689999999999999999999999999999999999999999
Q ss_pred CCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC--CCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCe
Q 004825 396 KADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG--SPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSI 473 (728)
Q Consensus 396 ~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~--~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~l 473 (728)
++|++++.+|++|+++++++|.+|+.|+++++++. ..++..+++.|++++||++.++|++++.|++... ...++++
T Consensus 695 ~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l 772 (5163)
T PRK12316 695 VGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--VASCTSL 772 (5163)
T ss_pred CCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCc
Confidence 99999999999999999999999999999999864 3477789999999999999999999999986532 3357899
Q ss_pred eEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCc-ccccccccccCCCCCceEEEEcCCCCccCCCCCc
Q 004825 474 RCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSL-LQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPG 552 (728)
Q Consensus 474 r~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~g 552 (728)
|.+++|||++++++.+++.+.+++++++|.||+||+++.++.... .......++|+|++|++++|+|++++++|.|+.
T Consensus 773 ~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~- 851 (5163)
T PRK12316 773 RRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDANLEPVPVGVL- 851 (5163)
T ss_pred cEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCCCCCCCCCCc-
Confidence 999999999999999999888888899999999999865443322 222345689999999999999999999999987
Q ss_pred eeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHh
Q 004825 553 MGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICN 632 (728)
Q Consensus 553 iGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~ 632 (728)
|||+|++..+.. .|+++++.|++.|..+|+.+|.+||+|||+|++++||.|+|+||+|+|||++|+||+|+|||++|.
T Consensus 852 -GEl~i~G~~v~~-GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~ 929 (5163)
T PRK12316 852 -GELYLAGRGLAR-GYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLL 929 (5163)
T ss_pred -eEEEecccccCh-hhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHH
Confidence 999997776654 346788899999999998888999999999999999999999999999999999999999999995
Q ss_pred cCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhH
Q 004825 633 AVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMR 712 (728)
Q Consensus 633 ~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR 712 (728)
.||+|.+|+|++.+ + +.++|||++.+ +. ....+ .++++++++||.||+|..|+++++||+|+|||+||
T Consensus 930 -~~p~V~~a~V~~~~----~-~~lva~vv~~~-~~-~~~~~----~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr 997 (5163)
T PRK12316 930 -EHPWVREAAVLAVD----G-KQLVGYVVLES-EG-GDWRE----ALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDR 997 (5163)
T ss_pred -hCCCcceEEEEEcC----C-CeEEEEEEccC-CC-CCCHH----HHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhH
Confidence 99999999999875 4 78999999876 33 23334 45557888999999999999999999999999999
Q ss_pred HHHHHHHH
Q 004825 713 RVLRKQLA 720 (728)
Q Consensus 713 ~~L~~~~~ 720 (728)
++|++...
T Consensus 998 ~~L~~~~~ 1005 (5163)
T PRK12316 998 KALPAPEA 1005 (5163)
T ss_pred HhhcCccc
Confidence 99987543
No 14
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.2e-82 Score=853.65 Aligned_cols=648 Identities=15% Similarity=0.137 Sum_probs=516.0
Q ss_pred HHcCCChHHH---HHHHHHHHHHHHhcCC--CChhhHHHHHHhhcCCCCCCccchhheeeecccCCCC-----CCCccCC
Q 004825 18 EALGIPSKLA---EQLHEKLAEIVNTHGA--ATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPD-----PPAWIPD 87 (728)
Q Consensus 18 ~~~~~~~~~~---~~f~~~l~~~~~~~~~--~hq~~pfe~lv~~l~~~r~~~~~~~~f~~~~~~~~~~-----~~~~~~~ 87 (728)
+++|+..+.. .++.++|+++.+...+ +||++||+++.+..+.+++.++|+.||...++..... ..+....
T Consensus 3553 lp~Rv~~~~~~~~~t~~~~L~~v~~~~~~~~~~q~~~l~~i~~~~~~~~~~~LF~t~~v~~n~~~~~~~~~~~~~~~~~~ 3632 (4334)
T PRK05691 3553 IALRVQLPAAGQRCSVRQWLQGLLDSNMELREYEYLPLVAIQECSELPKGQPLFDSLFVFENAPVEVSVLDRAQSLNASS 3632 (4334)
T ss_pred cceEEeeCCccCCCcHHHHHHHHHHHHHHHhhccCCCHHHHHHHhcCCCCCCCccEEEEeecCCcchhhhcccccccccc
Confidence 6778887654 5899999999988877 9999999999998887666655555444433321100 0011111
Q ss_pred h--hhhhhccHHHHHHHhccccccCC-CCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCCCC
Q 004825 88 P--EAAKVTNVGKLLQTRGEEFLGSG-YKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLS 164 (728)
Q Consensus 88 ~--~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (728)
. ....+|+|++.+.. ++.+...+ |++ ++|.+.+++++.++|..+|+++. +.+...+...++..+++.
T Consensus 3633 ~~~~~~~~~~l~~~~~~-~~~l~~~l~y~~-----~~~~~~~~~~l~~~f~~~L~~l~----~~~~~~~~~~~~~~~~~~ 3702 (4334)
T PRK05691 3633 DSGRTHTNFPLTAVCYP-GDDLGLHLSYDQ-----RYFDAPTVERLLGEFKRLLLALV----QGFHGDLSELPLLGEQER 3702 (4334)
T ss_pred cccccccCCCeEEEEec-CCceEEEEEEch-----hhCCHHHHHHHHHHHHHHHHHHH----hCcCCChhhcCCCCHHHH
Confidence 1 12346666664433 44566677 998 99999999999999999999983 344444555444333332
Q ss_pred -CCCCCCCCCCcc----hHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEE
Q 004825 165 -NPGGQWLPGAFV----NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIA 239 (728)
Q Consensus 165 -~~~~~w~~~~~~----~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Va 239 (728)
..+..|+..... ..++++|.++++++||++||++.+. ++||+||+++++++|++|++.|+++|++|+
T Consensus 3703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~--------~~tY~eL~~~~~~la~~L~~~gv~~~~~V~ 3774 (4334)
T PRK05691 3703 DFLLDGCNRSERDYPLEQSYVRLFEAQVAAHPQRIAASCLDQ--------QWSYAELNRAANRLGHALRAAGVGVDQPVA 3774 (4334)
T ss_pred HHHHHhhCCccCCCccccCHHHHHHHHHHhCCCceEEEcCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 234456654332 2456788889999999999999888 999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC-CcEEEEcCC
Q 004825 240 IDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA-PLAIVIPAK 318 (728)
Q Consensus 240 i~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 318 (728)
||+++|++++++||||+|+|++||||||++|.+|+.+|+++++++++|++.........+ ........ ..+.+.+
T Consensus 3775 v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-- 3850 (4334)
T PRK05691 3775 LLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARAL--LDELGCANRPRLLVWE-- 3850 (4334)
T ss_pred EEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhh--hcccccccccceeeec--
Confidence 999999999999999999999999999999999999999999999999998643211110 00000000 0111111
Q ss_pred CCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCC
Q 004825 319 GSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKAD 398 (728)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d 398 (728)
+..... .+...+.....++++|||+|||||||+||||+++|+++++.+.+....++++++|
T Consensus 3851 ----------------~~~~~~---~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~ 3911 (4334)
T PRK05691 3851 ----------------EVQAGE---VASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEAD 3911 (4334)
T ss_pred ----------------cccccc---ccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccc
Confidence 000000 0011122345689999999999999999999999999999999999999999999
Q ss_pred EEEecCCcchhhhHHHHHHHhhhCcEEEEeCCC--CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEE
Q 004825 399 IVAWPTNLGWMMGPWLVYASLLNGASIALYNGS--PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCF 476 (728)
Q Consensus 399 ~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i 476 (728)
++++.++++||.+++++|.+|+.|+++++++.. .++..+++.+++++||++.++|++++.++... ...+++||.+
T Consensus 3912 ~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~ 3988 (4334)
T PRK05691 3912 VIAQTASQSFDISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWM 3988 (4334)
T ss_pred eEEEecCCchhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEE
Confidence 999999999999999999999999999998753 35778999999999999999999999987642 2347889999
Q ss_pred EeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcc---cccccccccCCCCCceEEEEcCCCCccCCCCCce
Q 004825 477 GSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLL---QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGM 553 (728)
Q Consensus 477 ~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~gi 553 (728)
++|||++++++.++|.+.+++++++|.||+||+++.++..... ......++|+|++|++++|+|+.++++|.|..
T Consensus 3989 ~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~p~g~~-- 4066 (4334)
T PRK05691 3989 LPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDEALELVPLGAV-- 4066 (4334)
T ss_pred EecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECCCCCCCCCCCc--
Confidence 9999999999999998888889999999999999865543322 12234689999999999999999999999987
Q ss_pred eEEEEeccccCCCccccCccccccccccCCC-CCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHh
Q 004825 554 GELALSPLIFGASSTLLNANHYDVYFSGMPS-RNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICN 632 (728)
Q Consensus 554 GEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~-~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~ 632 (728)
|||+|+|..++.+ |+++++.|+++|+.+|+ .+|.|||||||+|||++||.|+|+||+|+|||++|+||+++|||++|.
T Consensus 4067 GEL~i~G~~v~~G-Y~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~ 4145 (4334)
T PRK05691 4067 GELCVAGTGVGRG-YVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLH 4145 (4334)
T ss_pred eEEEEeccccccc-ccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHH
Confidence 9999988877654 47789999999999997 367899999999999999999999999999999999999999999995
Q ss_pred cCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhH
Q 004825 633 AVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMR 712 (728)
Q Consensus 633 ~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR 712 (728)
.+|+|.+|+|+... ...+ +.++||++... +. .+..++.+.|+++|+++||.||+|..|+.+++||+|+||||||
T Consensus 4146 -~~~~v~~a~v~~~~-~~~~-~~l~a~~~~~~-~~--~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr 4219 (4334)
T PRK05691 4146 -EQAEVREAAVAVQE-GVNG-KHLVGYLVPHQ-TV--LAQGALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDR 4219 (4334)
T ss_pred -hCCCccEEEEEEec-CCCC-cEEEEEEeCCc-cc--ccchHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccH
Confidence 99999999887654 3344 78999999765 32 3344566778889999999999999999999999999999999
Q ss_pred HHHHHH
Q 004825 713 RVLRKQ 718 (728)
Q Consensus 713 ~~L~~~ 718 (728)
++|++.
T Consensus 4220 ~~L~~~ 4225 (4334)
T PRK05691 4220 KALPAL 4225 (4334)
T ss_pred hhcCCC
Confidence 999875
No 15
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.8e-82 Score=792.14 Aligned_cols=640 Identities=17% Similarity=0.171 Sum_probs=502.1
Q ss_pred HHHHcCCChHHHHHHHHHHHHHHHhcCC--CChhhHHHHHHhhcCCCCCCccchhheeeecccCCCC-CCCccCC-----
Q 004825 16 DIEALGIPSKLAEQLHEKLAEIVNTHGA--ATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPD-PPAWIPD----- 87 (728)
Q Consensus 16 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~--~hq~~pfe~lv~~l~~~r~~~~~~~~f~~~~~~~~~~-~~~~~~~----- 87 (728)
..+++++..+...+|.++|+++++...+ +||+|||++|++.++..+ ..+|+ |+++|++.+. .....+.
T Consensus 295 ntlplr~~~~~~~tf~~~l~~~~~~~~~~~~h~~~p~~~i~~~l~~~~--~~~~l--f~~~~~~~~~~~~~~~~~~~~~~ 370 (1296)
T PRK10252 295 NVLPLRVHIAAQETLPELATRLAAQLKKMRRHQRYDAEQIVRDSGRAA--GDEPL--FGPVLNIKVFDYQLDFPGVQAQT 370 (1296)
T ss_pred ceEEEEEecCCCCCHHHHHHHHHHHHHHHHhhcCCCHHHHHHHhcCcc--CCCCc--eeEEEEeeecccccCcCCcccee
Confidence 3578888888899999999999998877 999999999999997443 34455 5555544110 0000000
Q ss_pred --hhhhhhccHHHHHH-HhccccccCC-CCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCCC
Q 004825 88 --PEAAKVTNVGKLLQ-TRGEEFLGSG-YKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHL 163 (728)
Q Consensus 88 --~~~~~~~~l~~~~~-~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (728)
......+||.+.+. ..++++...+ |++ ++|.+.+++++.++|..+|+++. +.|...+....+...++
T Consensus 371 ~~~~~~~~~dl~l~~~~~~~~~l~~~~~y~~-----~~f~~~~i~~l~~~~~~ll~~~~----~~p~~~i~~~~~~~~~~ 441 (1296)
T PRK10252 371 HTLATGPVNDLELALFPDEHGGLSIEILANP-----QRYDEATLIAHAERLKALIAQFA----ADPALLCGDVDILLPGE 441 (1296)
T ss_pred eecCCCccCCeEEEEEECCCCcEEEEEEECh-----hhCCHHHHHHHHHHHHHHHHHHH----hCCCCChhhcCCCCHHH
Confidence 00112346666554 2345677778 988 99999999999999999999974 33444333333222211
Q ss_pred CCCCCCCCCCCc---chHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 004825 164 SNPGGQWLPGAF---VNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAI 240 (728)
Q Consensus 164 ~~~~~~w~~~~~---~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai 240 (728)
......|+.... .....++|.++++++|+++|+++.+. .+||+||+++++++|++|.+.|+++|++|+|
T Consensus 442 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l 513 (1296)
T PRK10252 442 YAQLAQVNATAVEIPETTLSALVAQQAAKTPDAPALADARY--------QFSYREMREQVVALANLLRERGVKPGDSVAV 513 (1296)
T ss_pred HHHHHHhcCCCCCCCcCCHHHHHHHHHHhCCCCeEEEcCCC--------cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 111223433221 12455678888999999999999877 8999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCC
Q 004825 241 DMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGS 320 (728)
Q Consensus 241 ~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 320 (728)
+++|++++++++|||+++|++|+|+||++|.+++.+++++++++++|++.......... . ....+..
T Consensus 514 ~~~~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~---------~-~~~~~~~--- 580 (1296)
T PRK10252 514 ALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV---------P-DLTSLCY--- 580 (1296)
T ss_pred EeCCCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC---------C-Cceeeec---
Confidence 99999999999999999999999999999999999999999999999987542111100 0 0000000
Q ss_pred CcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEE
Q 004825 321 SFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIV 400 (728)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~ 400 (728)
...... ..........++++|||+|||||||.||||+++|+++++.+.+....++++++|++
T Consensus 581 -------------~~~~~~-----~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~ 642 (1296)
T PRK10252 581 -------------NAPLAP-----QGAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVV 642 (1296)
T ss_pred -------------cccccc-----ccCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEE
Confidence 000000 00001122357899999999999999999999999999999999999999999999
Q ss_pred EecCCcchhhhHHHHHHHhhhCcEEEEeCCC--CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCC--CCCCcCeeEE
Q 004825 401 AWPTNLGWMMGPWLVYASLLNGASIALYNGS--PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCID--GYDWSSIRCF 476 (728)
Q Consensus 401 l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~--~~~l~~lr~i 476 (728)
++.+|++|+.+++++|.+|+.|+++++.+.. .++..+++.|++++||++.++|+++..+++..... ...++++|.+
T Consensus 643 l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i 722 (1296)
T PRK10252 643 LQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQV 722 (1296)
T ss_pred EEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEE
Confidence 9999999999999999999999999997642 36778999999999999999999999988753222 1246789999
Q ss_pred EeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCccc------ccccccccCCCCCceEEEEcCCCCccCCCC
Q 004825 477 GSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQ------AQSLAAFSTPAMGCKLFILGNDGCPIPQNV 550 (728)
Q Consensus 477 ~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~------~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~ 550 (728)
++|||++++++.+++.+.+ +++++|.||+||+++.++...... .....++|+|++|++++|+|++++++|.|+
T Consensus 723 ~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~g~ 801 (1296)
T PRK10252 723 FCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMRPVPPGV 801 (1296)
T ss_pred EEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCCCCCCCCCC
Confidence 9999999999999888765 588999999999987655433221 223568999999999999999999999999
Q ss_pred CceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHH
Q 004825 551 PGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERI 630 (728)
Q Consensus 551 ~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~ 630 (728)
. |||+|++..+..+ |+++++.|+++|..+|+.+|.+||+|||+|++++||.++|+||.|+|||++|+||+|.|||++
T Consensus 802 ~--Gel~i~g~~~~~G-Y~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~ 878 (1296)
T PRK10252 802 A--GDLYLTGIQLAQG-YLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRA 878 (1296)
T ss_pred c--eEEEecccccchh-hCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHH
Confidence 7 9999977665543 467889999999999988889999999999999999999999999999999999999999999
Q ss_pred HhcCCCCeeeeEEEeec----CCCCC-ceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCC
Q 004825 631 CNAVDSNVLETAAIGVP----PPDGG-PEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRT 705 (728)
Q Consensus 631 l~~~~p~V~~~~Vv~~~----~~~~g-~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t 705 (728)
|. .||+|.+++|++.. +...| ...+++|++... +. ..+..++ +++++++||.||+|..++.+++||+|
T Consensus 879 l~-~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~-~~-~~~~~~l----~~~l~~~Lp~~~~P~~~~~~~~lP~t 951 (1296)
T PRK10252 879 MQ-ALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQS-GL-PLDTSAL----QAQLRERLPPHMVPVVLLQLDQLPLS 951 (1296)
T ss_pred HH-hCccccceEEEEEeccccccCCCCccEEEEEEEcCC-CC-CCCHHHH----HHHHHhhCchhcCCcEEEEecCCCCC
Confidence 95 89999999877652 11112 247999999876 43 3454544 45688899999999999999999999
Q ss_pred CCCchhHHHHHHH
Q 004825 706 ATNKVMRRVLRKQ 718 (728)
Q Consensus 706 ~~GKvdR~~L~~~ 718 (728)
+||||||++|++.
T Consensus 952 ~~GKidr~~L~~~ 964 (1296)
T PRK10252 952 ANGKLDRKALPLP 964 (1296)
T ss_pred CCcChhHHhcCCC
Confidence 9999999999764
No 16
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-78 Score=700.39 Aligned_cols=579 Identities=26% Similarity=0.410 Sum_probs=466.1
Q ss_pred CCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCCCCCCCCCCCCCCcchHhhhhcccccCCCCCCeE
Q 004825 116 ISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIV 195 (728)
Q Consensus 116 ~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~~~pd~~A 195 (728)
+.+|..+.+++++++..||..+.+. +.|.+++.++++. ..+..+||.++..|.++++|+++++++|+++|
T Consensus 16 ~~~~~~~~~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~--------~~~~~~w~~~~~~n~~~~~l~~~~~~~p~~~A 85 (637)
T PRK00174 16 MEQYKALYQESVEDPEGFWAEQAKR--LDWFKPFDTVLDW--------NAPFIKWFEDGELNVSYNCLDRHLKTRGDKVA 85 (637)
T ss_pred hHHHHHHHHHHhcCHHHHHHHHHHh--cCeecCCcccccC--------CCCCCccCCCCEeEHHHHHHHHhhccCCCCeE
Confidence 3567999999999999999999887 4688888887653 14568999999999999999999999999999
Q ss_pred EEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHH
Q 004825 196 IRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEIS 275 (728)
Q Consensus 196 l~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~ 275 (728)
+++.+.. .+..+++||+||+++++++|++|++.|+++||+|+|+++|++++++++|||+++|++++|++|.++.+++.
T Consensus 86 l~~~~~~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~ 163 (637)
T PRK00174 86 IIWEGDD--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFSAEALA 163 (637)
T ss_pred EEEECCC--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHH
Confidence 9986541 12345899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCceEEEEecceecCCcccchHhh----HhhcC--CcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCccc
Q 004825 276 ARLRISKAKAIFTQDLIIRGDKSIPLYRV----IDAQA--PLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFA 349 (728)
Q Consensus 276 ~~l~~~~~~~il~~~~~~~~~~~~~~~~~----~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (728)
+++++++++++|+++.....++.++.... ..... ..++++........ ........++++..... ....
T Consensus 164 ~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~ 238 (637)
T PRK00174 164 DRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVD-WVEGRDLWWHELVAGAS----DECE 238 (637)
T ss_pred HHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcC-cCCCCcccHHHHHhhcC----CCCC
Confidence 99999999999998876555444433321 11111 22333332211110 00112445666654321 1222
Q ss_pred cccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHH-HHHHhcCCCCCCEEEecCCcchhhhH-HHHHHHhhhCcEEEE
Q 004825 350 AVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAA-DAWCHMDIRKADIVAWPTNLGWMMGP-WLVYASLLNGASIAL 427 (728)
Q Consensus 350 ~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl 427 (728)
.....+++++||+|||||||.||||+++|++++.... .....++++++|++++.++++|+.+. +.++.+|..|+++++
T Consensus 239 ~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~ 318 (637)
T PRK00174 239 PEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLM 318 (637)
T ss_pred ccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEE
Confidence 3445679999999999999999999999999865443 34455789999999999999999987 578999999999999
Q ss_pred eCCC---CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCC--CCCCCcCeeEEEeecCCCCHHHHHHHHhccC--CCCe
Q 004825 428 YNGS---PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCI--DGYDWSSIRCFGSTGEASNVDEYLWLMGRAL--YKPV 500 (728)
Q Consensus 428 ~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~--~~~l 500 (728)
+++. +++..+++.|++++||++.++|++++.|++.... ...++++||.+++|||++++++++++.+.++ .+++
T Consensus 319 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i 398 (637)
T PRK00174 319 FEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPI 398 (637)
T ss_pred ECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCce
Confidence 8753 3677899999999999999999999999876432 2356789999999999999999998887765 3789
Q ss_pred EecccccccccccccCCcc-cccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCc-cccCccccccc
Q 004825 501 IEYCGGTEIGGGFITGSLL-QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASS-TLLNANHYDVY 578 (728)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~-~~~~~~~~~~~ 578 (728)
+|.||+||+++.++...+. .....+++|+|++|++++|+|++|+++|.|+. |||+|.+++.+... |+++++.+.+.
T Consensus 399 ~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d~~g~~~~~g~~--Gel~v~g~~p~~~~gy~~~~~~~~~~ 476 (637)
T PRK00174 399 VDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVDEEGNPLEGGEG--GNLVIKDPWPGMMRTIYGDHERFVKT 476 (637)
T ss_pred EecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEECCCCCCCCCCCc--EEEEEcCCCCcccccccCCHHHHHHh
Confidence 9999999998755433221 12345789999999999999999999999987 99999764322222 34455544333
Q ss_pred cccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEE
Q 004825 579 FSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTI 658 (728)
Q Consensus 579 f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a 658 (728)
|... .+| ||+|||+|++++||+++|+||.||+||++|+||+|.|||++|. .||+|.+|+|++.+++..| +.+++
T Consensus 477 ~~~~--~~g--~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~-~~~~V~~~~Vvg~~~~~~g-~~~~a 550 (637)
T PRK00174 477 YFST--FKG--MYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALV-AHPKVAEAAVVGRPDDIKG-QGIYA 550 (637)
T ss_pred hhcC--CCC--EEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-eEEEE
Confidence 3111 123 9999999999999999999999999999999999999999995 9999999999999988877 89999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhh
Q 004825 659 VVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 659 ~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 722 (728)
||++.+ +. . ..+++.+.|+++++++|+.|++|..|+++++||+|+|||++|++|++++...
T Consensus 551 ~vv~~~-~~-~-~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 551 FVTLKG-GE-E-PSDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred EEEECC-CC-C-CCHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 999887 44 2 2345667788899999999999999999999999999999999999987653
No 17
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=6.4e-82 Score=846.61 Aligned_cols=651 Identities=16% Similarity=0.160 Sum_probs=522.0
Q ss_pred HHHcCCChHHHHHHHHHHHHHHHhcCC--CChhhHHHHHHhhcCCCCCCccchhheeeecccCCCC---CC--------C
Q 004825 17 IEALGIPSKLAEQLHEKLAEIVNTHGA--ATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPD---PP--------A 83 (728)
Q Consensus 17 ~~~~~~~~~~~~~f~~~l~~~~~~~~~--~hq~~pfe~lv~~l~~~r~~~~~~~~f~~~~~~~~~~---~~--------~ 83 (728)
.+++|+..+.+.+|.++|+++++...+ +||++||++|++.|+++|+.+++|+ ||++|++.+. .. .
T Consensus 2020 tlPlrv~~~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~iv~~l~~~r~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~~~ 2097 (4334)
T PRK05691 2020 TQVLRCQLDGQMSVSELLEQVRQTVIEGQSHQDLPFDHLVEALQPPRSAAYNPL--FQVMCNVQRWEFQQSRQLAGMTVE 2097 (4334)
T ss_pred eeeEEeecCCCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHhccccccCCCCc--eEEEEEeeccccccccCCCCceeE
Confidence 468899999999999999999998877 9999999999999999999999999 9999876211 00 0
Q ss_pred ccCChhhhhhccHHHHHHHhccccccCC-CCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCC
Q 004825 84 WIPDPEAAKVTNVGKLLQTRGEEFLGSG-YKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENH 162 (728)
Q Consensus 84 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (728)
.........+|||.+.+.+.++++...+ |++ ++|++++++++..+|..+|+++. +.++..+...++..++
T Consensus 2098 ~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~~~~~l~~~~----~~~~~~~~~l~~~~~~ 2168 (4334)
T PRK05691 2098 YLVNDARATKFDLNLEVTDLDGRLGCCLTYSR-----DLFDEPRIARMAEHWQNLLEALL----GDPQQRLAELPLLAAA 2168 (4334)
T ss_pred eecccCCccccceEEEEEecCCcEEEEEEECc-----ccCCHHHHHHHHHHHHHHHHHHH----hhhcCChhhccCCcHH
Confidence 1111224567888888777777888888 999 99999999999999999999873 3333334333333322
Q ss_pred CCCC-CCCCCCCC----cchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCE
Q 004825 163 LSNP-GGQWLPGA----FVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSA 237 (728)
Q Consensus 163 ~~~~-~~~w~~~~----~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~ 237 (728)
+... ...|+... .....+++|.++++++|+++|+++.++ ++||+||+++++++|++|++.|+++|++
T Consensus 2169 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~~~~lA~~L~~~Gv~~g~~ 2240 (4334)
T PRK05691 2169 EQQQLLDSLAGEAGEARLDQTLHGLFAAQAARTPQAPALTFAGQ--------TLSYAELDARANRLARALRERGVGPQVR 2240 (4334)
T ss_pred HHHHHHHHhCCCCcCCCcccchHHHHHHHHHHCCCCeEEEeCCe--------EEcHHHHHHHHHHHHHHHHHcCCCCCCE
Confidence 2222 22233222 123466788889999999999999877 9999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcC
Q 004825 238 IAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPA 317 (728)
Q Consensus 238 Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 317 (728)
|+|+++||+++++++|||+|+|++|||+||.+|.+++.+++++++++++|++.........+. .....+.+..
T Consensus 2241 V~l~~~~s~~~vv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~ 2313 (4334)
T PRK05691 2241 VGLALERSLEMVVGLLAILKAGGAYVPLDPEYPLERLHYMIEDSGIGLLLSDRALFEALGELP-------AGVARWCLED 2313 (4334)
T ss_pred EEEEeCCCHHHHHHHHHHHHhCcEeecCCCCChHHHHHHHHHhcCCCEEEeChhhhhhhcccc-------ccceeEEecc
Confidence 999999999999999999999999999999999999999999999999999875431110000 0000111110
Q ss_pred CCCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCC
Q 004825 318 KGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKA 397 (728)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (728)
. ...+ .. ...........++++|||+|||||||+||||+++|+++.+.+.+....++++++
T Consensus 2314 ~--------------~~~~-~~----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKGV~~~h~~l~~~~~~~~~~~~~~~~ 2374 (4334)
T PRK05691 2314 D--------------AAAL-AA----YSDAPLPFLSLPQHQAYLIYTSGSTGKPKGVVVSHGEIAMHCQAVIERFGMRAD 2374 (4334)
T ss_pred c--------------hhhh-hc----CCCCCCCCCCCCCCcEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCcc
Confidence 0 0000 00 000111122457899999999999999999999999999999998899999999
Q ss_pred CEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCC-CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEE
Q 004825 398 DIVAWPTNLGWMMGPWLVYASLLNGASIALYNGS-PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCF 476 (728)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~-~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i 476 (728)
|+++++++++|+.+++++|.+|+.|+++++.+.. .++..+++.|++++||++.++|++++.|.+.... .....++|.+
T Consensus 2375 d~~l~~~~~~fd~~~~~i~~~L~~G~~lvl~~~~~~~~~~l~~~i~~~~vt~~~~tPs~~~~l~~~~~~-~~~~~~lr~i 2453 (4334)
T PRK05691 2375 DCELHFYSINFDAASERLLVPLLCGARVVLRAQGQWGAEEICQLIREQQVSILGFTPSYGSQLAQWLAG-QGEQLPVRMC 2453 (4334)
T ss_pred cEEEEecCccHHHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHHhhhc-cccCCCceEE
Confidence 9999999999999999999999999999997643 3678899999999999999999999999765322 2345679999
Q ss_pred EeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcc----cccccccccCCCCCceEEEEcCCCCccCCCCCc
Q 004825 477 GSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLL----QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPG 552 (728)
Q Consensus 477 ~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~g 552 (728)
++|||++++++.+++.+.++...++|.||+||+++..+.+... ......++|+|++|+.++|+|++++++|.|++
T Consensus 2454 ~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~pi~~~~~~i~d~~~~~vp~G~~- 2532 (4334)
T PRK05691 2454 ITGGEALTGEHLQRIRQAFAPQLFFNAYGPTETVVMPLACLAPEQLEEGAASVPIGRVVGARVAYILDADLALVPQGAT- 2532 (4334)
T ss_pred EEccccCCHHHHHHHHHhCCCceEEeCcCCCcceEEEEEeecccccccCCCCCccccccCCCEEEEECCCCCCCCCCCc-
Confidence 9999999999999998888767899999999998654332211 11224579999999999999999999999987
Q ss_pred eeEEEEeccccCCCccccCccccccccccCCCC-CCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHH
Q 004825 553 MGELALSPLIFGASSTLLNANHYDVYFSGMPSR-NGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERIC 631 (728)
Q Consensus 553 iGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~-~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l 631 (728)
|||+|++..+..+ |+++++.|+++|..+|+. .|.|||+|||+|++++||.++|+||+|+|||++|+||+|+|||++|
T Consensus 2533 -GEL~i~G~~v~~G-Y~~~~~~t~~~F~~~p~~~~~~r~y~TGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~EIE~~l 2610 (4334)
T PRK05691 2533 -GELYVGGAGLAQG-YHDRPGLTAERFVADPFAADGGRLYRTGDLVRLRADGLVEYVGRIDHQVKIRGFRIELGEIESRL 2610 (4334)
T ss_pred -eEEEecccccCcc-ccCChhhhhhhccCCCCCCCCCceEeccceEEEcCCCCEEEeecccCeEEeeeEEechHHHHHHH
Confidence 9999977766543 467889999999999874 4778999999999999999999999999999999999999999999
Q ss_pred hcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchh
Q 004825 632 NAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVM 711 (728)
Q Consensus 632 ~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvd 711 (728)
. .||+|.+|+|++..++ .+ +.+++|++.............+.+.|+++++++||.||+|..|+.+++||+|+|||+|
T Consensus 2611 ~-~~p~V~~a~V~~~~~~-~~-~~lva~vv~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~v~~lP~t~~GKid 2687 (4334)
T PRK05691 2611 L-EHPAVREAVVLALDTP-SG-KQLAGYLVSAVAGQDDEAQAALREALKAHLKQQLPDYMVPAHLILLDSLPLTANGKLD 2687 (4334)
T ss_pred H-hCCCcceEEEEEeeCC-CC-cEEEEEEEecccccccccccccHHHHHHHHHhhCccccCChhheeecccCCCCCCccc
Confidence 5 9999999999988443 44 7899999875411101112334567788899999999999999999999999999999
Q ss_pred HHHHHHHH
Q 004825 712 RRVLRKQL 719 (728)
Q Consensus 712 R~~L~~~~ 719 (728)
|++|++..
T Consensus 2688 r~~L~~~~ 2695 (4334)
T PRK05691 2688 RRALPAPD 2695 (4334)
T ss_pred HHhhcCcc
Confidence 99998654
No 18
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-78 Score=699.73 Aligned_cols=580 Identities=23% Similarity=0.338 Sum_probs=465.0
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCCCCCCCCCCCCCCcchHhhhhcccccCCCCCCeEE
Q 004825 117 SSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKRSLDDIVI 196 (728)
Q Consensus 117 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~~~pd~~Al 196 (728)
.+|+.+++++++++..||.++++. +.|.++++++++... .+..+||.++..|.++++|+++++.+|+++|+
T Consensus 2 ~~~~~~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~~-------~~~~~wf~~~~~n~~~~~l~~~~~~~p~~~A~ 72 (629)
T PRK10524 2 MSYSEFYQRSIDDPEAFWAEQARR--IDWQTPFTQVLDYSN-------PPFARWFVGGRTNLCHNAVDRHLAKRPEQLAL 72 (629)
T ss_pred hhHHHHHHHHhcCHHHHHHHHHHh--CCcccCchhhccCCC-------CCcCccCCCcEeeHHHHHHHHhhccCCCCeEE
Confidence 478999999999999999999996 479999998875422 34578999999999999999999899999999
Q ss_pred EEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHH
Q 004825 197 RWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISA 276 (728)
Q Consensus 197 ~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~ 276 (728)
++.+. ..+..+++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.+
T Consensus 73 ~~~~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~ 150 (629)
T PRK10524 73 IAVST--ETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAA 150 (629)
T ss_pred EEEcC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHH
Confidence 98542 1123458999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCceEEEEecceecCCcccchHhhH----hh---cCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCccc
Q 004825 277 RLRISKAKAIFTQDLIIRGDKSIPLYRVI----DA---QAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFA 349 (728)
Q Consensus 277 ~l~~~~~~~il~~~~~~~~~~~~~~~~~~----~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (728)
++++++++++|+++...+.++.++....+ .. ....++++....... .........+.++...... ...+
T Consensus 151 ~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~ 226 (629)
T PRK10524 151 RIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM-ARVAGRDVDYATLRAQHLG---ARVP 226 (629)
T ss_pred HHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc-CcccCCcccHHHHHhcCCC---CCCC
Confidence 99999999999988766666555443221 11 122344443221110 0111223456655433211 1112
Q ss_pred cccCCCCCceEEEecCCCCCCCceEEecCcHHHHHH-HHHHHhcCCCCCCEEEecCCcchhhhH-HHHHHHhhhCcEEEE
Q 004825 350 AVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAA-ADAWCHMDIRKADIVAWPTNLGWMMGP-WLVYASLLNGASIAL 427 (728)
Q Consensus 350 ~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl 427 (728)
.....+++++||+|||||||.||||+++|++++... ......++++++|++++.++++|+++. +.++.+|+.|+++++
T Consensus 227 ~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~ 306 (629)
T PRK10524 227 VEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIM 306 (629)
T ss_pred ceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEE
Confidence 233567899999999999999999999999875433 334456788999999999999999886 678999999999999
Q ss_pred eCCC---CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC--CCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEe
Q 004825 428 YNGS---PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC--IDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIE 502 (728)
Q Consensus 428 ~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (728)
+++. +++..++++|+++++|++.++|++++.|.+... ....++++||.+++|||++++++.+++.+.++ ++++|
T Consensus 307 ~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~-~~v~~ 385 (629)
T PRK10524 307 YEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEALG-VPVID 385 (629)
T ss_pred ECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhcC-CCeEe
Confidence 8764 356789999999999999999999999877542 23456889999999999999999999887774 88999
Q ss_pred cccccccccccccCCc---ccccccccccCCCCCceEEEEcC-CCCccCCCCCceeEEEEecccc-CCC-ccccCcccc-
Q 004825 503 YCGGTEIGGGFITGSL---LQAQSLAAFSTPAMGCKLFILGN-DGCPIPQNVPGMGELALSPLIF-GAS-STLLNANHY- 575 (728)
Q Consensus 503 ~YG~TE~~~~~~~~~~---~~~~~~~~iG~p~~~~~v~i~d~-~g~~vp~g~~giGEl~v~~~~~-~~~-~~~~~~~~~- 575 (728)
.||+||++..++.... ......+++|+|++|++++|+|+ +|+++|.|+. |||+|+++.. +.. .++++++.+
T Consensus 386 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~--Gel~i~gp~~~~~~~~~~~~~~~~~ 463 (629)
T PRK10524 386 NYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEK--GVLVIEGPLPPGCMQTVWGDDDRFV 463 (629)
T ss_pred ccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCc--EEEEEcCCCChhhcCCccCChHHHH
Confidence 9999999843332221 12234578999999999999999 8999999987 9999966421 111 233444433
Q ss_pred ccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceE
Q 004825 576 DVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQ 655 (728)
Q Consensus 576 ~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~ 655 (728)
..+|... +.+||+|||+|++++||+++++||+||+||++|+||+|.|||++|. .||+|.+|+|++.+++..| +.
T Consensus 464 ~~~~~~~----~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~-~~p~V~e~~vvg~~d~~~g-~~ 537 (629)
T PRK10524 464 KTYWSLF----GRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESIS-SHPAVAEVAVVGVKDALKG-QV 537 (629)
T ss_pred HhhhccC----CCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHH-hCCCcceEEEEccccCCCC-eE
Confidence 3333322 2349999999999999999999999999999999999999999996 9999999999999998777 89
Q ss_pred EEEEEEecCCCCCC---CCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 656 LTIVVVFKDSNYTP---PDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 656 l~a~vv~~~~~~~~---~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+++|+++++ +... ....++.+.|+++++++|+.|++|..|+++++||+|+|||++|+.|+++++.
T Consensus 538 ~~~~vv~~~-~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 605 (629)
T PRK10524 538 AVAFVVPKD-SDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEG 605 (629)
T ss_pred EEEEEEECC-CCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcC
Confidence 999999876 3211 1234677889999999999999999999999999999999999999998765
No 19
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-77 Score=647.59 Aligned_cols=586 Identities=34% Similarity=0.504 Sum_probs=494.7
Q ss_pred CCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCCCCCCCCCCCCCCcchHhhhhcccccCC-C
Q 004825 112 YKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHLSNPGGQWLPGAFVNPAKNCLSVNSKR-S 190 (728)
Q Consensus 112 y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~~-~ 190 (728)
|...+.+|..|+++++++++.||...++.+.... .++.. .... .......+|++++..|.+++|++++.+. .
T Consensus 6 ~~~~~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~-~~~~~--~~~~----~~~~~~~~w~~g~~ln~~~n~~~~~~~~~~ 78 (626)
T KOG1175|consen 6 YKNSLSSYREFYRFSVEDPERFWGEVAKELHWKF-PWPRC--NKDE----NKGNPFTKWFPGAFLNACYNCLDRHIKEKG 78 (626)
T ss_pred cCCCHHHHHHHHhhcccCHHHHHHHhhhhhhccc-Ccccc--cccc----ccCCCCccccccchhhhhHhhhhhhhhhcC
Confidence 6677789999999999999999999999863222 22211 1111 1235678999999999999999998644 5
Q ss_pred CCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCC
Q 004825 191 LDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFA 270 (728)
Q Consensus 191 pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~ 270 (728)
++++|+++.+.++. ....+||.||.+++.++|..|++.|+++||+|+++||+.+++++++|||.++|++.+++...++
T Consensus 79 ~~~~a~~~~~~~~~--~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs 156 (626)
T KOG1175|consen 79 GDKVAIIFEGNEGG--DTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFS 156 (626)
T ss_pred CCCcEEEEEecCCC--ceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCC
Confidence 99999999876422 2234999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCccc
Q 004825 271 SLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFA 349 (728)
Q Consensus 271 ~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (728)
+..+..+++++++++|+|.+...+.++.++.. .+.+.......................+..|++.+..... ..+
T Consensus 157 ~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~~----~~~ 232 (626)
T KOG1175|consen 157 AKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKASP----EHP 232 (626)
T ss_pred HHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhcCC----CCC
Confidence 99999999999999999999999999988877 3333322111111111111111112236778877666543 334
Q ss_pred cccCCCCCceEEEecCCCCCCCceEEecCcH-HHHHHHHHHHhcCCCCCCEEEecCCcchhhhHH-HHHHHhhhCcEEEE
Q 004825 350 AVEQPVEAFTNILFSSGTTGEPKAIPWTNAT-PFKAAADAWCHMDIRKADIVAWPTNLGWMMGPW-LVYASLLNGASIAL 427 (728)
Q Consensus 350 ~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~-l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~G~~lvl 427 (728)
+...+.+|+.+|+|||||||.||||.+++.+ ++..+.....+++++++|++++.+.++|+++.+ .++++|++|+++++
T Consensus 233 ~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl 312 (626)
T KOG1175|consen 233 CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVL 312 (626)
T ss_pred ceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEE
Confidence 7788899999999999999999999999875 566666677789999999999999999999995 57889999999999
Q ss_pred eCCCC-CcchHHHHHHHhCCcEEEecHHHHHHHHcCCCC--CCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecc
Q 004825 428 YNGSP-LGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCI--DGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYC 504 (728)
Q Consensus 428 ~~~~~-~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (728)
+++.+ ++..+++.+.+++||++++.|+.++.|.+.... ...++++||.+.++||++.++.+.|+.+.++..++++.|
T Consensus 313 ~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~ 392 (626)
T KOG1175|consen 313 YEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETY 392 (626)
T ss_pred EcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhce
Confidence 99877 888999999999999999999999988776443 334446799999999999999999999988755799999
Q ss_pred cccccccccccCCccc-ccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEecccc-CCCccccC-cc-ccccccc
Q 004825 505 GGTEIGGGFITGSLLQ-AQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIF-GASSTLLN-AN-HYDVYFS 580 (728)
Q Consensus 505 G~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~-~~~~~~~~-~~-~~~~~f~ 580 (728)
|+||+|..++...+.. +..+++.|.|.+|+.+.|+|++|+.++.+. |.|+|++.+..+ +....+++ ++ ....||.
T Consensus 393 ~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~ 471 (626)
T KOG1175|consen 393 GQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELPPST-GNGELRLKPPWPPGMFRTLWGNHERFRAAYFK 471 (626)
T ss_pred eeeccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcCCCC-ceeEEEEeCCCCccccccccCCHHHhhhhhcc
Confidence 9999999888777765 788999999999999999999999999875 569999977777 55555554 44 4577777
Q ss_pred cCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEE
Q 004825 581 GMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVV 660 (728)
Q Consensus 581 ~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~v 660 (728)
++| | +|+|||.|++|+||+++++||.||+||++|+|+.+.|||+++. .||.|.|++||+.+++..| +.++|||
T Consensus 472 k~p---g--~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~-~hp~VaEsAvVg~p~~~~g-e~v~aFv 544 (626)
T KOG1175|consen 472 KFP---G--YYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALV-EHPAVAESAVVGSPDPIKG-EVVLAFV 544 (626)
T ss_pred cCC---c--eEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHh-hCcchhheeeecCCCCCCC-eEEEEEE
Confidence 666 3 9999999999999999999999999999999999999999995 9999999999999999988 9999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 661 VFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 661 v~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
++++ +. .+.++|+++|++++|+.+.++.+|+.|++++.||+|.|||+.|+.|++.+..
T Consensus 545 vl~~-g~--~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g 602 (626)
T KOG1175|consen 545 VLKS-GS--HDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASG 602 (626)
T ss_pred EEcC-CC--CChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhcc
Confidence 9998 64 7889999999999999999999999999999999999999999999999875
No 20
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-74 Score=627.83 Aligned_cols=507 Identities=24% Similarity=0.278 Sum_probs=425.3
Q ss_pred ccCCCCCC-eEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCCCHHHHHHHHHHHHcCcEE
Q 004825 186 NSKRSLDD-IVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALG--LDKGSAIAIDMPMNVNSVVIYLAIVLAGYIV 262 (728)
Q Consensus 186 ~~~~~pd~-~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~G--v~~gd~Vai~~~~s~~~vva~lA~lkaG~~~ 262 (728)
.+...+++ +++++.... .+.+||+|+..++.++|.+|.++| +++||+|+|++||++++++.+|||..+|+++
T Consensus 25 ~~~~~~~~~~~~i~~~~~-----g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~ 99 (537)
T KOG1176|consen 25 PAFVYLDRNTSLVYQDSD-----GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVL 99 (537)
T ss_pred cccccccCcceEEEecCC-----CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccc
Confidence 33344444 888877631 129999999999999999999876 8999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcC-HHHHHHhhh
Q 004825 263 VSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDIS-WLDFLERVR 341 (728)
Q Consensus 263 vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~ 341 (728)
.|++|.+.+.++.+.++++++++++++........ .........++++................. +.++.....
T Consensus 100 ~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~-----~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (537)
T KOG1176|consen 100 NPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKIS-----EATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGL 174 (537)
T ss_pred cccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHH-----HHHhhcCCceEEEecccCccccccccccccchhhccccCC
Confidence 99999999999999999999999999986542111 222222345555544311111111111111 222222211
Q ss_pred ccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhh
Q 004825 342 KLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLN 421 (728)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (728)
. .. ..+...+|++.|+|||||||.||||++||++++...........++..|+.++..|++|..|++.++.+++.
T Consensus 175 ~----~~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~ 249 (537)
T KOG1176|consen 175 P----DG-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLA 249 (537)
T ss_pred C----cc-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHh
Confidence 1 11 455667999999999999999999999999999887777677778889999999999999999888887777
Q ss_pred CcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeE
Q 004825 422 GASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVI 501 (728)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (728)
|++.++.....++..+++.|++|+||+++++|.++..|++.+.....+++++|.+.+||.++++++.+++.++++...+.
T Consensus 250 ~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~ 329 (537)
T KOG1176|consen 250 GGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVI 329 (537)
T ss_pred CCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEE
Confidence 77777777777889999999999999999999999999998767778999999999999999999999999999988999
Q ss_pred ecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCcccccccccc
Q 004825 502 EYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSG 581 (728)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~ 581 (728)
+.||+||+++..+.+........+++|++++|.++.|.++.|+.+++++. ||||+.++....+ |++|++.|++.|..
T Consensus 330 q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~e~g~~l~~~~~--GEI~vrg~~imkG-Y~~NpeaT~~~~~~ 406 (537)
T KOG1176|consen 330 QGYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLDETGVSLGPNQT--GEICVRGPQVMKG-YLKNPEATKEAFDD 406 (537)
T ss_pred EeeccccccCceeecCCCccCcccccCccccceEEEeeCCCCCCCCCCCc--eEEEEECcccchh-hcCChHHHHhhccc
Confidence 99999999976665554333578899999999999999999999999997 9999966655432 57899999999975
Q ss_pred CCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEE
Q 004825 582 MPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVV 661 (728)
Q Consensus 582 ~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv 661 (728)
+ | ||+|||+|++|+||+|++++|++|+||.+|+.|+|.|||++|. .||.|.||+|++++|+..| +.++||||
T Consensus 407 ~----G--W~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~-~hP~V~eaaVvgipDe~~G-e~p~A~VV 478 (537)
T KOG1176|consen 407 D----G--WFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLL-THPDVLEAAVVGIPDEVWG-ETPAAFVV 478 (537)
T ss_pred C----C--ccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHH-hCCCccEEEEEcccccccC-CcceEEEE
Confidence 4 3 9999999999999999999999999999999999999999996 9999999999999999999 99999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhhcc
Q 004825 662 FKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQLDQ 724 (728)
Q Consensus 662 ~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~ 724 (728)
.++ +. ..+++++++ .++++|++|++|..++++++||+|+||||.|+.|++.+.++..
T Consensus 479 ~k~-g~-~lte~di~~----~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~~ 535 (537)
T KOG1176|consen 479 LKK-GS-TLTEKDIIE----YVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKLGS 535 (537)
T ss_pred ecC-CC-cCCHHHHHH----HHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhccc
Confidence 997 66 677777776 5888899999999999999999999999999999999988654
No 21
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=3.3e-73 Score=572.29 Aligned_cols=518 Identities=21% Similarity=0.204 Sum_probs=431.0
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
+..+++.-.+++-||+.|+++...+ .++||+|+.+.++++|+.|.++|+++||||+|+.||+.+|+..+|||.+
T Consensus 51 Tigq~l~~~t~~v~dkea~Vf~~eg------~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~ 124 (596)
T KOG1177|consen 51 TIGQLLETTTERVPDKEAAVFDHEG------IRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACAR 124 (596)
T ss_pred cHHHHHHHHhhccCcceEEEEeecc------chhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHH
Confidence 4456677777889999999998764 3899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhh-------------cCCcEEEEcCCCCCccc
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDA-------------QAPLAIVIPAKGSSFSM 324 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~~ 324 (728)
+|.+.|+++|.|+.+++++.|+..+++++|+...+....-.....++..+ .+....++-.+..
T Consensus 125 AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed---- 200 (596)
T KOG1177|consen 125 AGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADED---- 200 (596)
T ss_pred hceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCC----
Confidence 99999999999999999999999999999998754211000000011111 1112222222211
Q ss_pred ccCCCCcCHHHHHHhhhccccC--ccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEe
Q 004825 325 KLRDGDISWLDFLERVRKLKEN--EFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAW 402 (728)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~ 402 (728)
....+...++|++...+...-. ........|++++.|.|||||||.|||+.+||-|++|+......++++...+++++
T Consensus 201 ~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~ 280 (596)
T KOG1177|consen 201 HPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICI 280 (596)
T ss_pred CcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEe
Confidence 1234667788888766542111 11234567899999999999999999999999999999999999999999999999
Q ss_pred cCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecC
Q 004825 403 PTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGE 481 (728)
Q Consensus 403 ~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe 481 (728)
..|++|.++. ..++.+|..|+|+|++..++++...++.|.++++|.++.+|+++..|++.......+++++|.++.||.
T Consensus 281 ~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa 360 (596)
T KOG1177|consen 281 PNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGA 360 (596)
T ss_pred cCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCC
Confidence 9999999995 789999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred CCCHHHHHHHHhccCCCCeEecccccccccccccCCccc--ccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEe
Q 004825 482 ASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQ--AQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALS 559 (728)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~ 559 (728)
++|+++.+.+.....-..+...||.||++...+.....+ .....++|+.+++.+..|+|..|.++|.|.+ |||++.
T Consensus 361 ~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~~~g~~v~~~~~--Gel~iR 438 (596)
T KOG1177|consen 361 PVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVDKDGSEVPLGTK--GELLIR 438 (596)
T ss_pred CCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccccccccccCCCCccccCCC--ceEEEE
Confidence 999999998887655345889999999997665555433 2345689999999999999999999999998 999997
Q ss_pred ccccCCCccccC-ccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCe
Q 004825 560 PLIFGASSTLLN-ANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNV 638 (728)
Q Consensus 560 ~~~~~~~~~~~~-~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V 638 (728)
+..... +||+ ++.|.+... .+|||+|||.|+++++|+++++||.+|+|+.+|++|+|.|||+.|. .||.|
T Consensus 439 GY~tMl--~Ywg~~~kT~eti~------~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~-~hp~V 509 (596)
T KOG1177|consen 439 GYSTML--GYWGEEEKTKETIG------NDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLN-KHPLV 509 (596)
T ss_pred echhhe--eecCCcccchhhcc------cccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHh-hCCCe
Confidence 653322 2444 344544333 4579999999999999999999999999999999999999999996 99999
Q ss_pred eeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHH
Q 004825 639 LETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQ 718 (728)
Q Consensus 639 ~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~ 718 (728)
.++.||+++|+..| +.++|+|-++. +.+. .-..+.|+.+++.+|..|++|+.|++++++|+|-+|||.|.+++++
T Consensus 510 ~~a~VVGV~D~R~G-E~VCA~vRLqe-~~e~---~~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKFeir~~ 584 (596)
T KOG1177|consen 510 KEAHVVGVPDERLG-EEVCACVRLQE-GAEG---KTTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKFEIREM 584 (596)
T ss_pred eeEEEEccCCCccc-ceEEEEEEeec-cccc---cccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhHHHHHH
Confidence 99999999999999 99999999987 4411 1233445557889999999999999999999999999999999999
Q ss_pred HHh
Q 004825 719 LAQ 721 (728)
Q Consensus 719 ~~~ 721 (728)
.+.
T Consensus 585 ~k~ 587 (596)
T KOG1177|consen 585 SKG 587 (596)
T ss_pred HHh
Confidence 985
No 22
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-70 Score=627.08 Aligned_cols=519 Identities=25% Similarity=0.353 Sum_probs=430.3
Q ss_pred CCCCCCcchHhhhhcccccC-CCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH
Q 004825 169 QWLPGAFVNPAKNCLSVNSK-RSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVN 247 (728)
Q Consensus 169 ~w~~~~~~~~~~~~l~~~~~-~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~ 247 (728)
+|+.+...|.++++++++++ ..|+++|+++.+.. ..+++||+||.++++++|++|.+.|+++||+|+|+++|+++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~ 110 (570)
T PRK04319 35 SWLETGKVNIAYEAIDRHADGGRKDKVALRYLDAS----RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPE 110 (570)
T ss_pred ccCCCCceeHHHHHHHHhhccCCCCceEEEEECCC----CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH
Confidence 58888899999999999886 57999999986531 23489999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC--CcEEEEcCCCCCcccc
Q 004825 248 SVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA--PLAIVIPAKGSSFSMK 325 (728)
Q Consensus 248 ~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~ 325 (728)
+++++|||+++|++++|+++.++.+++.+++++++++++|++......... ...+ ..++++.....
T Consensus 111 ~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~----- 178 (570)
T PRK04319 111 LYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA-------DDLPSLKHVLLVGEDVE----- 178 (570)
T ss_pred HHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch-------hcCCCceEEEEECCCcC-----
Confidence 999999999999999999999999999999999999999998764322110 0111 12222221110
Q ss_pred cCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCC
Q 004825 326 LRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTN 405 (728)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~ 405 (728)
...+..++.++...... ........++++++|+|||||||.||||+++|+++++.+......++++++|++++..+
T Consensus 179 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 254 (570)
T PRK04319 179 EGPGTLDFNALMEQASD----EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTAD 254 (570)
T ss_pred CCcCccCHHHHHhhcCC----cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCC
Confidence 11233456665543221 22233456789999999999999999999999999988877777889999999999999
Q ss_pred cchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC--CCCCCCcCeeEEEeecCC
Q 004825 406 LGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC--IDGYDWSSIRCFGSTGEA 482 (728)
Q Consensus 406 ~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~~lr~i~~gGe~ 482 (728)
++|.++. +.++.+|..|+++++.+...++..+++.|+++++|++.++|++++.|.+... ....++++||.+++||++
T Consensus 255 ~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~ 334 (570)
T PRK04319 255 PGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEP 334 (570)
T ss_pred hHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccC
Confidence 9999886 6789999999999998877788899999999999999999999999987542 234567899999999999
Q ss_pred CCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccc
Q 004825 483 SNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLI 562 (728)
Q Consensus 483 l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~ 562 (728)
+++++.+++.+.++ .++++.||+||++..++..........+++|+|++|++++|+|++++++|+|+. |||+|.+++
T Consensus 335 l~~~~~~~~~~~~g-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~~--Gel~i~~~~ 411 (570)
T PRK04319 335 LNPEVVRWGMKVFG-LPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVDDQGNELPPNRM--GNLAIKKGW 411 (570)
T ss_pred CCHHHHHHHHHHhC-CCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEECCCCCCCCCCCc--eEEEEcCCC
Confidence 99999998887764 789999999999865443333223446789999999999999999999999986 999996422
Q ss_pred cCCC-ccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeee
Q 004825 563 FGAS-STLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLET 641 (728)
Q Consensus 563 ~~~~-~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~ 641 (728)
.+.. .|+++++.++++|.+ | ||+|||+|++++||+++++||.||+||++|++|+|.|||++|. +||.|.++
T Consensus 412 ~~~~~GY~~~~~~~~~~~~~-----g--w~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~-~~~~V~~~ 483 (570)
T PRK04319 412 PSMMRGIWNNPEKYESYFAG-----D--WYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLM-EHPAVAEA 483 (570)
T ss_pred ChHHhHhcCCHHHhhhhhcC-----C--ceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHh-hCCCeeec
Confidence 2211 245566777777752 3 9999999999999999999999999999999999999999995 99999999
Q ss_pred EEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 642 AAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 642 ~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+|++.+++..| +.+++|++..+ +. ...+++.+.|+++++++|+.|++|..|+++++||+|++||++|++|+++..+
T Consensus 484 ~v~g~~~~~~g-~~~~a~v~~~~-~~--~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~ 559 (570)
T PRK04319 484 GVIGKPDPVRG-EIIKAFVALRP-GY--EPSEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELG 559 (570)
T ss_pred ceecccCcCCc-eEEEEEEEECC-CC--CCCHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHhC
Confidence 99999988777 89999999876 43 2334667788889999999999999999999999999999999999999765
Q ss_pred h
Q 004825 722 L 722 (728)
Q Consensus 722 ~ 722 (728)
+
T Consensus 560 ~ 560 (570)
T PRK04319 560 L 560 (570)
T ss_pred C
Confidence 4
No 23
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.7e-71 Score=626.32 Aligned_cols=496 Identities=21% Similarity=0.222 Sum_probs=405.6
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
...++|.++++++||++|+++.++ ++||+||.++++++|++|++.|+++||+|+|+++|++++++++|||++
T Consensus 50 ~~~~~~~~~a~~~pd~~Al~~~~~--------~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~ 121 (549)
T PRK07788 50 PFAGLVAHAARRAPDRAALIDERG--------TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGK 121 (549)
T ss_pred hHHHHHHHHHHHCCCceEEEECCC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHh
Confidence 456778889999999999998776 999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCC-cEEEEcCCCCCcccccCCCCcCHHHH
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAP-LAIVIPAKGSSFSMKLRDGDISWLDF 336 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 336 (728)
+|++++|+++.++.+++.+++++++++++|+++....... .+...... ..+........ ....+...++++
T Consensus 122 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 193 (549)
T PRK07788 122 VGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLS-----ALPPDLGRLRAWGGNPDDDE---PSGSTDETLDDL 193 (549)
T ss_pred cCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHH-----hhccccccceEEEEecCccc---cCCcCcccHHHH
Confidence 9999999999999999999999999999999875431110 11111111 11111111100 011234556666
Q ss_pred HHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHH
Q 004825 337 LERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVY 416 (728)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 416 (728)
...... ...+..++++++++|||||||.||||+++|+++.+.+.+....+++..+|+++...|++|..++..++
T Consensus 194 ~~~~~~------~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 267 (549)
T PRK07788 194 IAGSST------APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLT 267 (549)
T ss_pred hcCCCC------CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHH
Confidence 543221 11223457889999999999999999999999999888887888999999999999999999998888
Q ss_pred HHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCC--CCCCCcCeeEEEeecCCCCHHHHHHHHhc
Q 004825 417 ASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCI--DGYDWSSIRCFGSTGEASNVDEYLWLMGR 494 (728)
Q Consensus 417 ~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~~lr~i~~gGe~l~~~~~~~~~~~ 494 (728)
.++..|+++++.. ..++..+++.++++++|++.++|+++..+++.... ...++++||.+++|||++++++.+++.+.
T Consensus 268 ~~l~~G~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~ 346 (549)
T PRK07788 268 LAMALGSTVVLRR-RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEA 346 (549)
T ss_pred HHHHhCCEEEECC-CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHH
Confidence 8999999998874 46788999999999999999999999999886543 45568899999999999999999999887
Q ss_pred cCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccc
Q 004825 495 ALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANH 574 (728)
Q Consensus 495 ~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~ 574 (728)
++ .+++|.||+||++...+...........++|+|++|++++|+|+++++++.|+. |||+|.+.....+ |.+.+.
T Consensus 347 ~~-~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~g--Y~~~~~ 421 (549)
T PRK07788 347 FG-PVLYNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILDENGNEVPRGVV--GRIFVGNGFPFEG--YTDGRD 421 (549)
T ss_pred hC-ccceeccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEECCCcCCCCCCCe--EEEEEeCCCcccc--ccCCCc
Confidence 75 689999999999865443322222345789999999999999999999999986 9999977654432 233222
Q ss_pred cccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCce
Q 004825 575 YDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPE 654 (728)
Q Consensus 575 ~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~ 654 (728)
. . + .+| ||+|||+|++++||.++|+||.||+||++|++|+|.|||++|. .||+|.+++|++.+++..| +
T Consensus 422 ~-~-~-----~~g--~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~~~~~~~~g-~ 490 (549)
T PRK07788 422 K-Q-I-----IDG--LLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLA-GHPDVVEAAVIGVDDEEFG-Q 490 (549)
T ss_pred c-c-c-----cCC--ceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHH-hCCCeeEEEEECCcCcccc-c
Confidence 1 1 1 123 9999999999999999999999999999999999999999995 9999999999999888777 8
Q ss_pred EEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHH
Q 004825 655 QLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQ 718 (728)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~ 718 (728)
.++++|++++ +. ..+.+++ +++++++||.|++|..|+++++||+|+|||++|++|+++
T Consensus 491 ~~~a~vv~~~-~~-~~~~~~l----~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 491 RLRAFVVKAP-GA-ALDEDAI----KDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred EEEEEEEeCC-CC-CCCHHHH----HHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 9999999876 44 3455544 446788899999999999999999999999999999764
No 24
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3e-70 Score=615.92 Aligned_cols=505 Identities=24% Similarity=0.269 Sum_probs=413.7
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
.....|.++++++|+++|+++.+..+ ++||+||+++++++|+.|++.|+++||+|+|+++|+++++++++||++
T Consensus 12 ~~~~~l~~~a~~~~~~~a~~~~~~~~------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~ 85 (534)
T COG0318 12 TLASLLERAARRNPDRPALIFLGRGG------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALR 85 (534)
T ss_pred cHHHHHHHHHHhCCCceEEEEcCCCc------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 34566888889999999999988720 399999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCCcEEEEcCCCCCcccccCCCC--cCHH
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAPLAIVIPAKGSSFSMKLRDGD--ISWL 334 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~ 334 (728)
+|++.+|++|.+..+++.++++++++++++++.... ... .+.........+...... ... ..+.
T Consensus 86 ~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 152 (534)
T COG0318 86 AGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFA------ALLEAVAEALPVVLVVLLVGDA-------DDRLPITLE 152 (534)
T ss_pred cCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccch------hHHHHHhccCCcceEEEecccc-------cccccccHH
Confidence 999999999999999999999999999999998521 111 111111111111111100 000 2344
Q ss_pred HHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcC--CCCCCEEEecCCcchhhhH
Q 004825 335 DFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMD--IRKADIVAWPTNLGWMMGP 412 (728)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~ 412 (728)
+....... .........++++|+|+|||||||.||||++||+|++.+.......++ +++.|+++++.|++|++|+
T Consensus 153 ~~~~~~~~---~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl 229 (534)
T COG0318 153 ALAAEGPG---PDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGL 229 (534)
T ss_pred HHhhccCC---cccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHH
Confidence 44222111 111112267899999999999999999999999999998888888888 8999999999999999999
Q ss_pred HH-HHHHhhhCcEEEEeCC-CCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcC-eeEEEeecCCCCHHHHH
Q 004825 413 WL-VYASLLNGASIALYNG-SPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSS-IRCFGSTGEASNVDEYL 489 (728)
Q Consensus 413 ~~-~~~~L~~G~~lvl~~~-~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~-lr~i~~gGe~l~~~~~~ 489 (728)
.. ++.++..|+++++.++ .+++..++..+.++++|++.++|+++..|+........++++ ||.++.||+++++++++
T Consensus 230 ~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~ 309 (534)
T COG0318 230 IVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLE 309 (534)
T ss_pred HHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHH
Confidence 64 5566999999999875 468888999999999999999999999999887666655665 99999999999999999
Q ss_pred HHHhccCCCCeEecccccccccccccCCccc-ccccccccCCCCCceEEEEcCCCC-ccCCCCCceeEEEEeccccCCCc
Q 004825 490 WLMGRALYKPVIEYCGGTEIGGGFITGSLLQ-AQSLAAFSTPAMGCKLFILGNDGC-PIPQNVPGMGELALSPLIFGASS 567 (728)
Q Consensus 490 ~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~v~i~d~~g~-~vp~g~~giGEl~v~~~~~~~~~ 567 (728)
++.++++...+++.||+||++..++...... ....+++|+|++|++++|+|+++. ++| |.. |||+|.++.+..+
T Consensus 310 ~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~v--Gei~irgp~v~~G- 385 (534)
T COG0318 310 RFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEV--GEIWVRGPNVMKG- 385 (534)
T ss_pred HHHHHhCCCceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CCc--eEEEEECchhhhh-
Confidence 9999987668999999999997666555543 235667799999999999998765 566 764 9999965554332
Q ss_pred cccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeec
Q 004825 568 TLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVP 647 (728)
Q Consensus 568 ~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~ 647 (728)
|+++++.|++.|.. .+||+|||+|++|+||++++.||.+|+||++|++|+|.|||.++. .||.|.+|+|++++
T Consensus 386 Y~~~pe~t~~~f~~------~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~-~~~~V~~aavvgvp 458 (534)
T COG0318 386 YWNRPEATAEAFDE------DGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLA-EHPAVAEAAVVGVP 458 (534)
T ss_pred hcCChHHHHHhhcc------CCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHH-hCCCcceEEEEeCC
Confidence 45566888777764 239999999999999999999999999999999999999999995 99999999999999
Q ss_pred CCCCCceEEEEEEEecCCCCC-CCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 648 PPDGGPEQLTIVVVFKDSNYT-PPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 648 ~~~~g~~~l~a~vv~~~~~~~-~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
++..| +.++|++++++ +.. ..+.+++++ +++++++.|++|+.++++++||+|++||++|+.|++.+..
T Consensus 459 d~~~G-e~~~a~v~~~~-~~~~~~~~~~i~~----~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 459 DERWG-ERVVAVVVLKP-GGDAELTAEELRA----FLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred CCccC-ceEEEEEEEcC-CCCCCCCHHHHHH----HHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 99888 99999999987 421 224555555 6777999999999999999999999999999999999887
No 25
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.9e-69 Score=623.22 Aligned_cols=525 Identities=20% Similarity=0.168 Sum_probs=411.2
Q ss_pred CCcchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Q 004825 173 GAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIY 252 (728)
Q Consensus 173 ~~~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~ 252 (728)
........++|.++++++|+++|+++...++.....+++||+||.++++++|++|++.|+++||+|+++++|++++++++
T Consensus 21 ~~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~ 100 (632)
T PRK07529 21 RDLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFAL 100 (632)
T ss_pred hcCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 33445567889999999999999998543222223458999999999999999999999999999999999999999999
Q ss_pred HHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCC--cEEEEcCCCCCcc---cc-
Q 004825 253 LAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAP--LAIVIPAKGSSFS---MK- 325 (728)
Q Consensus 253 lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~--~~~~i~~~~~~~~---~~- 325 (728)
|||+++| +++|++|.++.+++.+++++++++++|++...... ...... ......+. .++.++....... ..
T Consensus 101 lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 178 (632)
T PRK07529 101 WGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGT-DIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAV 178 (632)
T ss_pred HHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCc-hHHHHHHHHHhcCCcceeEEEecCcccccccccccc
Confidence 9999999 57999999999999999999999999998754210 000001 11121221 1222221110000 00
Q ss_pred ------cCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCE
Q 004825 326 ------LRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADI 399 (728)
Q Consensus 326 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~ 399 (728)
...+..++.+.+..... ..........++++|+++|||||||.||||+++|+++++........+++.++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~ 256 (632)
T PRK07529 179 PLIRRKAHARILDFDAELARQPG--DRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDT 256 (632)
T ss_pred cccccccccccCCHHHHHhcCCC--ccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCE
Confidence 11223455554443221 1111223346799999999999999999999999999988777777788899999
Q ss_pred EEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCC--C---cchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCe
Q 004825 400 VAWPTNLGWMMGP-WLVYASLLNGASIALYNGSP--L---GSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSI 473 (728)
Q Consensus 400 ~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~--~---~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~l 473 (728)
+++..|++|..+. ..++.+|..|+++++.+... + ...+++.|+++++|++.++|+++..|++... ...++++|
T Consensus 257 ~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-~~~~~~sl 335 (632)
T PRK07529 257 VFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV-DGHDISSL 335 (632)
T ss_pred EEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc-cCCCccce
Confidence 9999999999887 46889999999999975321 2 2468899999999999999999999987643 23468899
Q ss_pred eEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEE--cCCC---CccCC
Q 004825 474 RCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFIL--GNDG---CPIPQ 548 (728)
Q Consensus 474 r~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~--d~~g---~~vp~ 548 (728)
|.+++||+++++++.+++.+.+ +++++|.||+||+++.++..........+++|+|++++.++|+ |++| +++|.
T Consensus 336 r~v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~ 414 (632)
T PRK07529 336 RYALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAV 414 (632)
T ss_pred EEEEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCCC
Confidence 9999999999999999998776 5899999999999876554433333456899999999998884 7777 88999
Q ss_pred CCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHH
Q 004825 549 NVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIE 628 (728)
Q Consensus 549 g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE 628 (728)
|+. |||+|.+..+..+ |.+++.+...|. +.+||+|||+|++++||++++.||.||+||++|++|+|.|||
T Consensus 415 g~~--Gel~v~gp~v~~G--Y~~~~~~~~~~~------~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE 484 (632)
T PRK07529 415 DEV--GVLCIAGPNVFSG--YLEAAHNKGLWL------EDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIE 484 (632)
T ss_pred CCc--eEEEEECCCcccc--ccCCcccccccc------CCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHH
Confidence 986 9999976654433 345555555553 234999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCC-CCcccceEEECCCCCCCCC
Q 004825 629 RICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLN-PLFKVSHVVPLPSLPRTAT 707 (728)
Q Consensus 629 ~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp-~~~~P~~i~~v~~lP~t~~ 707 (728)
++|. .||+|.+|+|++.+++..| +.+++||++.+ +. ..+.+++++ +++++|+ .+++|..|+++++||+|++
T Consensus 485 ~~l~-~~p~V~~a~vvg~~d~~~g-e~~~a~v~l~~-~~-~~~~~~l~~----~~~~~l~~~~~~P~~i~~v~~lP~t~~ 556 (632)
T PRK07529 485 EALL-RHPAVALAAAVGRPDAHAG-ELPVAYVQLKP-GA-SATEAELLA----FARDHIAERAAVPKHVRILDALPKTAV 556 (632)
T ss_pred HHHH-hCCCeeEEEEEeccCCCCC-ceeEEEEEEcC-CC-CCCHHHHHH----HHHHhcchhccCCcEEEEecCCCCCCC
Confidence 9996 8999999999999988777 89999999887 54 455666655 4666665 4799999999999999999
Q ss_pred CchhHHHHHHHHHh
Q 004825 708 NKVMRRVLRKQLAQ 721 (728)
Q Consensus 708 GKvdR~~L~~~~~~ 721 (728)
||++|++|++.+.+
T Consensus 557 GKi~r~~Lr~~~~~ 570 (632)
T PRK07529 557 GKIFKPALRRDAIR 570 (632)
T ss_pred CcccHHHHHHHHHH
Confidence 99999999998765
No 26
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.3e-70 Score=635.50 Aligned_cols=480 Identities=19% Similarity=0.211 Sum_probs=392.7
Q ss_pred hhhcccccCC--CCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 180 KNCLSVNSKR--SLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 180 ~~~l~~~~~~--~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
..+|.+++++ +||++|+++. . .+||+||+++++++|++|.+.|+++|++|+|+++|++++++++|||++
T Consensus 7 ~~~~~~~a~~~~~pd~~a~~~~-~--------~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~ 77 (705)
T PRK06060 7 AGLLAEQASEAGWYDRPAFYAA-D--------VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLA 77 (705)
T ss_pred HHHHHHHHhhccCCCceEEEec-C--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 3556666654 7999999863 3 799999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHH
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFL 337 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 337 (728)
+|++++|++|.++.+++.+++++++++++|++......... . . .....++.
T Consensus 78 aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~------------~-~----------------~~~~~~~~ 128 (705)
T PRK06060 78 RGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQP------------S-R----------------VAEAAELM 128 (705)
T ss_pred hCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcc------------c-c----------------cchhhhhh
Confidence 99999999999999999999999999999998743211000 0 0 00011111
Q ss_pred HhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHH-HhcCCCCCCEEEecCCcchhhhH-HHH
Q 004825 338 ERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAW-CHMDIRKADIVAWPTNLGWMMGP-WLV 415 (728)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~-~~~ 415 (728)
....... ........++++|||+|||||||.||||+++|+++.+.+.+.. ..++++++|++++..+++|+.++ ..+
T Consensus 129 ~~~~~~~--~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 206 (705)
T PRK06060 129 SEAARVA--PGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSV 206 (705)
T ss_pred hhccccC--CCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHH
Confidence 1100000 0111234568999999999999999999999999988776654 45788999999999999999887 578
Q ss_pred HHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhcc
Q 004825 416 YASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRA 495 (728)
Q Consensus 416 ~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~ 495 (728)
+.+|..|+++++.+...++..+...++++++|+++++|+++..+++... ...+++||.+++|||++++++.+++.+.+
T Consensus 207 ~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~ 284 (705)
T PRK06060 207 WFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFF 284 (705)
T ss_pred HHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHc
Confidence 8999999999998765677788899999999999999999999986532 23578999999999999999999998888
Q ss_pred CCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCcccc
Q 004825 496 LYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHY 575 (728)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~ 575 (728)
++++++|.||+||++..+..... .....+++|+|+++++++|+|++|+++|.|+. |||+|++..+..+ |+++++.+
T Consensus 285 ~~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~--GEl~i~g~~v~~G-Y~~~~~~~ 360 (705)
T PRK06060 285 GGIPILDGIGSTEVGQTFVSNRV-DEWRLGTLGRVLPPYEIRVVAPDGTTAGPGVE--GDLWVRGPAIAKG-YWNRPDSP 360 (705)
T ss_pred CCCceEeeeeccccCceEEeccC-CCCCcCcccccCCCcEEEEECCCCCCCCCCCc--eEEEEccchhhhh-hhCCCccc
Confidence 77899999999999865433322 22345789999999999999999999999987 9999976655432 34444432
Q ss_pred ccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceE
Q 004825 576 DVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQ 655 (728)
Q Consensus 576 ~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~ 655 (728)
+ .+.+||+|||+|++++||+++|+||.||+||++|+||+|.|||++|. .||.|.+++|++.+++..+ +.
T Consensus 361 ---~------~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~-~~~~V~~a~vv~~~~~~~~-~~ 429 (705)
T PRK06060 361 ---V------ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLII-EDEAVAEAAVVAVRESTGA-ST 429 (705)
T ss_pred ---c------cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeecCccCC-ee
Confidence 1 12359999999999999999999999999999999999999999996 8999999999999887666 78
Q ss_pred EEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHH
Q 004825 656 LTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQL 719 (728)
Q Consensus 656 l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~ 719 (728)
+++|++... +. ..+. +..+.++++++++||.||+|..|+++++||+|+|||+||++|++.+
T Consensus 430 ~~a~vv~~~-~~-~~~~-~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 430 LQAFLVATS-GA-TIDG-SVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQS 490 (705)
T ss_pred EEEEEEecc-cc-CcCh-HHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhc
Confidence 999999875 32 2232 2345677789999999999999999999999999999999999865
No 27
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.3e-69 Score=606.66 Aligned_cols=486 Identities=57% Similarity=1.016 Sum_probs=374.1
Q ss_pred cCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCCcEEEEcCCCC
Q 004825 242 MPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAPLAIVIPAKGS 320 (728)
Q Consensus 242 ~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~ 320 (728)
++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++........++.. .+........+++...+.
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 6899999999999999999999999999999999999999999999987532211112211 111111222333321111
Q ss_pred CcccccCCCCcCHHHHHHhhhcc---ccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCC
Q 004825 321 SFSMKLRDGDISWLDFLERVRKL---KENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKA 397 (728)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (728)
...........+|.++....... ......+....++++++|+|||||||.||||+++|++++..+......++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 00000011234566665322110 000111122356899999999999999999999999988766655566789999
Q ss_pred CEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC--CCCCCCcCeeE
Q 004825 398 DIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC--IDGYDWSSIRC 475 (728)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~~lr~ 475 (728)
|++++.+|++|+.+++.++.+|..|+++++.++..++..+++.|+++++|++.++|+++..|++... ....++++||.
T Consensus 161 d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr~ 240 (499)
T PLN03051 161 DVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLRV 240 (499)
T ss_pred CEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhheE
Confidence 9999999999999988888999999999998765677889999999999999999999999987542 33456889999
Q ss_pred EEeecCCCCHHHHHHHHhccC-CCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCcee
Q 004825 476 FGSTGEASNVDEYLWLMGRAL-YKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMG 554 (728)
Q Consensus 476 i~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giG 554 (728)
+++|||+++++..+++.+..+ +++++|.||+||++..++..........+++|+|.+|++++|+|++|+++|.|+..+|
T Consensus 241 i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~g~~~~~g~~~~G 320 (499)
T PLN03051 241 FASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLNDNGVPYPDDQPCVG 320 (499)
T ss_pred EEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccCCCCCceEEEECCCCCCCCCCCCcce
Confidence 999999999998887765332 3679999999998754333222223345789999999999999999999999852259
Q ss_pred EEEEeccccCCCccccCccccccccccCCCC--CCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHh
Q 004825 555 ELALSPLIFGASSTLLNANHYDVYFSGMPSR--NGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICN 632 (728)
Q Consensus 555 El~v~~~~~~~~~~~~~~~~~~~~f~~~p~~--~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~ 632 (728)
||+|.+++++...+|++++.++.+|..+|.. ++.+||+|||+|++|+||+|+|+||.||+||++|+||+|.|||++|.
T Consensus 321 el~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~ 400 (499)
T PLN03051 321 EVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEIERACD 400 (499)
T ss_pred EEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHHHHHHH
Confidence 9999887765333455555555555444443 56789999999999999999999999999999999999999999995
Q ss_pred cCCCCeeeeEEEeecCCCCCceEEEEEE---EecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCc
Q 004825 633 AVDSNVLETAAIGVPPPDGGPEQLTIVV---VFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNK 709 (728)
Q Consensus 633 ~~~p~V~~~~Vv~~~~~~~g~~~l~a~v---v~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GK 709 (728)
+.||+|.+|+|++++++..|.+.++||| ++++ +....+.++++++++++|+++|++|++|..|+++++||+|++||
T Consensus 401 ~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~-~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~i~~v~~lP~t~~GK 479 (499)
T PLN03051 401 RAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKK-GFDQARPEALQKKFQEAIQTNLNPLFKVSRVKIVPELPRNASNK 479 (499)
T ss_pred hcCCCcceEEEEEecCCCCCceEEEEEEEcceecc-cccccchHHHHHHHHHHHHhhcCCccCCceEEEcCCCCCCCCcc
Confidence 2399999999999999887756789998 7765 42125678899999999999999988888899999999999999
Q ss_pred hhHHHHHHHHHh-hcccCCC
Q 004825 710 VMRRVLRKQLAQ-LDQNSKL 728 (728)
Q Consensus 710 vdR~~L~~~~~~-~~~~~~l 728 (728)
|+|++|++.+.+ ++-.+||
T Consensus 480 i~r~~L~~~~~~~~~~~~~~ 499 (499)
T PLN03051 480 LLRRVLRDQLKKELSGRSKL 499 (499)
T ss_pred HHHHHHHHHHHHhhccccCC
Confidence 999999998876 5545664
No 28
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.3e-69 Score=613.64 Aligned_cols=499 Identities=17% Similarity=0.157 Sum_probs=390.9
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
...+.|.+.++++|+++|+.+...+ ++||+||.++++++|++|.+. +||+|+|+++|++++++++|||++
T Consensus 20 ~~~~~~~~~~~~~p~~~a~~~~~~~-------~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~lA~~~ 89 (539)
T PRK06334 20 TVLESFLKLCSEMTTATVCWDEQLG-------KLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAYFATLL 89 (539)
T ss_pred cHHHHHHHHHHhCCCceEEEeCCCC-------cccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHHHHHHh
Confidence 3446677888999999999876532 899999999999999999873 899999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhh---cCCcEEEEcCCCCCcccccCCCCcCHH
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDA---QAPLAIVIPAKGSSFSMKLRDGDISWL 334 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~ 334 (728)
+|++++|++|.++.+++.++|++++++++|++........ +.... ....++.++... ....+.
T Consensus 90 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~---------~~~~~~ 155 (539)
T PRK06334 90 SGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLA-----QTHGEDAEYPFSLIYMEEVR---------KELSFW 155 (539)
T ss_pred cCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHh-----hhhhccccccccEEEEehhh---------hhccHH
Confidence 9999999999999999999999999999999875321100 11000 111222221100 000111
Q ss_pred HHHHhhh-cccc-----CccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcch
Q 004825 335 DFLERVR-KLKE-----NEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGW 408 (728)
Q Consensus 335 ~~~~~~~-~~~~-----~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 408 (728)
+...... ...+ .........++++++|+|||||||.||||+++|+++.....+....++++++|+++++.|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h 235 (539)
T PRK06334 156 EKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFH 235 (539)
T ss_pred HhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHh
Confidence 1110000 0000 001112456799999999999999999999999999988887777888999999999999999
Q ss_pred hhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHH
Q 004825 409 MMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDE 487 (728)
Q Consensus 409 ~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~ 487 (728)
.+++ ..++.++..|+++++.....++..+++.|+++++|++.++|++++.|++.......++++||.+++||+++++++
T Consensus 236 ~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~ 315 (539)
T PRK06334 236 AYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSL 315 (539)
T ss_pred hhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHH
Confidence 9988 457899999999998765567889999999999999999999999998765445566889999999999999999
Q ss_pred HHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCC-CCccCCCCCceeEEEEeccccCCC
Q 004825 488 YLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGND-GCPIPQNVPGMGELALSPLIFGAS 566 (728)
Q Consensus 488 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~-g~~vp~g~~giGEl~v~~~~~~~~ 566 (728)
.+++.+.++++.++|.||+||++..++...........++|+|++|++++|+|++ ++++|.|+. |||+|.+..+..+
T Consensus 316 ~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~--Gel~v~g~~~~~G 393 (539)
T PRK06334 316 YQEALKTFPHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGET--GLVLTRGTSLFSG 393 (539)
T ss_pred HHHHHHHCCCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCCCCccCCCCce--EEEEEecCccccc
Confidence 9999988877899999999999866554433333345689999999999999964 889999986 9999976554332
Q ss_pred ccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeee------
Q 004825 567 STLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLE------ 640 (728)
Q Consensus 567 ~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~------ 640 (728)
|+++++.+ .|.. .+|.+||+|||+|++++||+++|+||.||+||++|++|+|.|||++|. .||+|.+
T Consensus 394 -Y~~~~~~~--~~~~---~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~-~~~~v~~~~~~~~ 466 (539)
T PRK06334 394 -YLGEDFGQ--GFVE---LGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILM-EGFGQNAADHAGP 466 (539)
T ss_pred -ccCCcccc--ccee---eCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHH-HccCCccccccCc
Confidence 34455433 2322 125569999999999999999999999999999999999999999996 9999998
Q ss_pred eEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhh-CCCCcccceEEECCCCCCCCCCchhHHHHHHHH
Q 004825 641 TAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKK-LNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQL 719 (728)
Q Consensus 641 ~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~-Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~ 719 (728)
++|++.+++ . ..+++|++.. .+.++++ ++++++ ++.||+|..++++++||+|+||||||++|+++.
T Consensus 467 ~~v~~~~~~--~-~~~~~~~~~~------~~~~~~~----~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~ 533 (539)
T PRK06334 467 LVVCGLPGE--K-VRLCLFTTFP------TSISEVN----DILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALA 533 (539)
T ss_pred eEEEcCCCC--c-eEEEEEEecc------CChHHHH----HHHHhcCCcccccchheeeecccccccCCcccHHHHHHHH
Confidence 677776642 1 4566666532 2334444 456664 789999999999999999999999999999987
Q ss_pred Hhh
Q 004825 720 AQL 722 (728)
Q Consensus 720 ~~~ 722 (728)
.++
T Consensus 534 ~~~ 536 (539)
T PRK06334 534 KSL 536 (539)
T ss_pred HHh
Confidence 764
No 29
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.6e-68 Score=609.19 Aligned_cols=508 Identities=17% Similarity=0.134 Sum_probs=396.4
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..++|.++++++|+++|+++.+. ++||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 9 ~~~~~~~~~~~~p~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~ 80 (563)
T PLN02860 9 ICQCLTRLATLRGNAVVTISGNR--------RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACA 80 (563)
T ss_pred HHHHHHHHHHhcCCceEEecCCc--------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhc
Confidence 44667888899999999998666 8999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhH-hhcCC-c-EEEEcCCCCCcccccCCCCcCHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVI-DAQAP-L-AIVIPAKGSSFSMKLRDGDISWLD 335 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~-~~~~~-~-~~~i~~~~~~~~~~~~~~~~~~~~ 335 (728)
|++++||+|.++.+++.+++++++++++++++....... .+. ..... . .++......... ........+++
T Consensus 81 Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~ 154 (563)
T PLN02860 81 GGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYE-----ELQNDRLPSLMWQVFLESPSSSVF-IFLNSFLTTEM 154 (563)
T ss_pred cEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHH-----HHhhccCCceeEEEEecCcccccc-cchhhccccch
Confidence 999999999999999999999999999999875311000 110 01111 1 111111100000 00000111111
Q ss_pred HHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHH
Q 004825 336 FLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLV 415 (728)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 415 (728)
+...... .........++++++|+|||||||.||||+++|++++.........++++++|+++...|++|+.++..+
T Consensus 155 ~~~~~~~---~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 231 (563)
T PLN02860 155 LKQRALG---TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 231 (563)
T ss_pred hccCccc---cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHH
Confidence 1111000 0011123457899999999999999999999999998877666667889999999999999999999888
Q ss_pred HHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCC--CCCCCcCeeEEEeecCCCCHHHHHHHHh
Q 004825 416 YASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCI--DGYDWSSIRCFGSTGEASNVDEYLWLMG 493 (728)
Q Consensus 416 ~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~~lr~i~~gGe~l~~~~~~~~~~ 493 (728)
+.+|..|+++++.+. .++..+++.|+++++|++.++|+++..|++.... ....+++||.+++||+++++++.+++.+
T Consensus 232 ~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~ 310 (563)
T PLN02860 232 LAMLMVGACHVLLPK-FDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKK 310 (563)
T ss_pred HHHHHcCceEEecCC-CCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHH
Confidence 999999999999764 5778899999999999999999999999875422 2245789999999999999999999998
Q ss_pred ccCCCCeEecccccccccccccCCccc----------------------ccccccccCCCCCceEEEEcCCCCccCCCCC
Q 004825 494 RALYKPVIEYCGGTEIGGGFITGSLLQ----------------------AQSLAAFSTPAMGCKLFILGNDGCPIPQNVP 551 (728)
Q Consensus 494 ~~~~~~l~n~YG~TE~~~~~~~~~~~~----------------------~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~ 551 (728)
.+++.+++|.||+||+++.++...... .....++|+|++|++++|+|++ +|+.
T Consensus 311 ~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~-----~g~~ 385 (563)
T PLN02860 311 LFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE-----SSRV 385 (563)
T ss_pred hcCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC-----CCce
Confidence 887789999999999976443322111 0112378999999999999976 4654
Q ss_pred ceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHH
Q 004825 552 GMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERIC 631 (728)
Q Consensus 552 giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l 631 (728)
|||+|++..+.. .|+++++.+++.|..+ +||+|||+|++++||+++|+||.||+||++|++|+|.|||++|
T Consensus 386 --Gel~v~g~~~~~-GY~~~~~~t~~~~~~~------g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l 456 (563)
T PLN02860 386 --GRILTRGPHVML-GYWGQNSETASVLSND------GWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVL 456 (563)
T ss_pred --eEEEEecCcccc-cccCCccccchhccCC------CeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHH
Confidence 999997665433 2456777777766432 3999999999999999999999999999999999999999999
Q ss_pred hcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCC---------CCHHHHHHHHHHHHHh-hCCCCcccceEEEC-C
Q 004825 632 NAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTP---------PDLNQLRMSFNSAVQK-KLNPLFKVSHVVPL-P 700 (728)
Q Consensus 632 ~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~---------~~~~~l~~~l~~~l~~-~Lp~~~~P~~i~~v-~ 700 (728)
. .||+|.+|+|++.+++..+ +.++|+|++.+ +... .......+.|++++++ +|+.||+|..|+++ +
T Consensus 457 ~-~~p~V~~~~v~~~~~~~~~-~~~~a~v~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~ 533 (563)
T PLN02860 457 S-QHPGVASVVVVGVPDSRLT-EMVVACVRLRD-GWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRK 533 (563)
T ss_pred H-hCCCcceeEEEEEecCcCC-ceEEEEEEECC-ccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEec
Confidence 5 9999999999999988777 89999999876 4200 0001112455667776 59999999988765 7
Q ss_pred CCCCCCCCchhHHHHHHHHHh
Q 004825 701 SLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 701 ~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+||+|++|||+|++|++++.+
T Consensus 534 ~lP~t~~GKi~r~~L~~~~~~ 554 (563)
T PLN02860 534 PFPLTTTGKIRRDEVRREVLS 554 (563)
T ss_pred CCCCCcccchhHHHHHHHHHH
Confidence 799999999999999999876
No 30
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.9e-68 Score=599.96 Aligned_cols=488 Identities=19% Similarity=0.181 Sum_probs=397.9
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
....|.++++++||++|+++.++ ++||+||+++++++|++|.++|+++|++|+|+++|++++++++|||+++
T Consensus 45 ~~~~l~~~a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 116 (537)
T PRK13382 45 PTSGFAIAAQRCPDRPGLIDELG--------TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRI 116 (537)
T ss_pred HHHHHHHHHHhCCCCeEEEeCCC--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHc
Confidence 45668888999999999998765 9999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCC--cEEEEcCCCCCcccccCCCCcCHHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAP--LAIVIPAKGSSFSMKLRDGDISWLDF 336 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~ 336 (728)
|++++|++|.++.+++.+++++++++++|++...... +. ........ ..+.++.. .....++++
T Consensus 117 G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 182 (537)
T PRK13382 117 GADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSAT---VD--RALADCPQATRIVAWTDE---------DHDLTVEVL 182 (537)
T ss_pred CcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHH---HH--HHHhhccccceEEEecCC---------cccccHHHH
Confidence 9999999999999999999999999999998753210 00 11111111 11111110 012334444
Q ss_pred HHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHH
Q 004825 337 LERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVY 416 (728)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 416 (728)
...... ......+++.++++|||||||.||||+++|++++.........+.+..+++++...|++|..++..++
T Consensus 183 ~~~~~~------~~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~ 256 (537)
T PRK13382 183 IAAHAG------QRPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLV 256 (537)
T ss_pred hhccCc------CCCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHH
Confidence 332111 01123468899999999999999999999999988887777778889999999999999999998889
Q ss_pred HHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCC--CCCCCcCeeEEEeecCCCCHHHHHHHHhc
Q 004825 417 ASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCI--DGYDWSSIRCFGSTGEASNVDEYLWLMGR 494 (728)
Q Consensus 417 ~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~~lr~i~~gGe~l~~~~~~~~~~~ 494 (728)
.++..|+++++.. ..++..+++.|+++++|++..+|++++.|++.... ...+++++|.+++|||+++++++..+.+.
T Consensus 257 ~~l~~g~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~ 335 (537)
T PRK13382 257 LAASLACTIVTRR-RFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQ 335 (537)
T ss_pred HHHhcCcEEEECC-CcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHH
Confidence 9999999998864 45788899999999999999999999999875422 23456789999999999999999999888
Q ss_pred cCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccc
Q 004825 495 ALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANH 574 (728)
Q Consensus 495 ~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~ 574 (728)
++ .+++|.||+||++..++...........++|+|++|+.++|+|++++++|.|+. |||+|.+..+..+ |. ++.
T Consensus 336 ~~-~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~--GEl~v~g~~~~~g--Y~-~~~ 409 (537)
T PRK13382 336 FG-DVIYNNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILDQDFREVPTGEV--GTIFVRNDTQFDG--YT-SGS 409 (537)
T ss_pred cC-CcEEecccccccCcceecChhHhccCCCCccccCcCcEEEEECCCCCCCCCCCe--eEEEEEcCCcccC--cc-ccc
Confidence 76 679999999999865543332223346789999999999999999999999986 9999976654432 33 343
Q ss_pred cccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCce
Q 004825 575 YDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPE 654 (728)
Q Consensus 575 ~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~ 654 (728)
+.. |. +| ||+|||++++++||+++|+||+||+||++|++|+|.|||.+|. .||+|.+++|++.+++..| +
T Consensus 410 ~~~-~~-----~g--~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~-~~~~V~~~~v~~~~~~~~g-~ 479 (537)
T PRK13382 410 TKD-FH-----DG--FMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLA-THPDVAEAAVIGVDDEQYG-Q 479 (537)
T ss_pred hhh-cc-----CC--CEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHH-hCCCEeeEEEEccCccccC-C
Confidence 432 21 23 9999999999999999999999999999999999999999995 9999999999999887777 8
Q ss_pred EEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHH
Q 004825 655 QLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRK 717 (728)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 717 (728)
.++++|++.+ +. ..+.+ .++++++++|+.|++|..++++++||+|++||++|++|++
T Consensus 480 ~~~a~vv~~~-~~-~~~~~----~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 480 RLAAFVVLKP-GA-SATPE----TLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred EEEEEEEECC-CC-CCCHH----HHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 8999999876 43 23434 4555788899999999999999999999999999999864
No 31
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=6.5e-67 Score=594.38 Aligned_cols=517 Identities=20% Similarity=0.235 Sum_probs=412.9
Q ss_pred CCCCCCCCcchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH
Q 004825 167 GGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNV 246 (728)
Q Consensus 167 ~~~w~~~~~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~ 246 (728)
...|... ...+.|.+.++.+|+++|+++.+.+ .+.++.+||+||.++++++|++|++.|+++|++|+++++|++
T Consensus 18 ~~~~~~~----~l~~~l~~~a~~~p~~~A~~~~~~~--~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~ 91 (547)
T PRK13295 18 AGHWHDR----TINDDLDACVASCPDKTAVTAVRLG--TGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWW 91 (547)
T ss_pred CCCCcCC----CHHHHHHHHHHHCCCceEEEecCCC--ccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh
Confidence 3567632 2456678888899999999986531 223459999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCC--cEEEEcCCCCCcc
Q 004825 247 NSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAP--LAIVIPAKGSSFS 323 (728)
Q Consensus 247 ~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~--~~~~i~~~~~~~~ 323 (728)
++++++|||+++|++++|++|.++.+++.+++++++++++|+++..... ...... ++...... .++.+...
T Consensus 92 e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----- 165 (547)
T PRK13295 92 EFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGF-DHAAMARRLRPELPALRHVVVVGGD----- 165 (547)
T ss_pred HHHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCc-chHHHHHHHhhhCCCcceEEEecCC-----
Confidence 9999999999999999999999999999999999999999998754210 000001 11111111 22222211
Q ss_pred cccCCCCcCHHHHHHhhhcc----ccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCE
Q 004825 324 MKLRDGDISWLDFLERVRKL----KENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADI 399 (728)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~ 399 (728)
...++.++....... ...........++++|+|+|||||||.||||+++|++++..+......++++++|+
T Consensus 166 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~ 240 (547)
T PRK13295 166 -----GADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDV 240 (547)
T ss_pred -----CccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCe
Confidence 122344443221100 00111122346789999999999999999999999999988888878889999999
Q ss_pred EEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEe
Q 004825 400 VAWPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGS 478 (728)
Q Consensus 400 ~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~ 478 (728)
+++..|++|..++ +.++.+|..|+++++.+. .++..+++.++++++|++.++|+++..|..........+++||.+++
T Consensus 241 ~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 319 (547)
T PRK13295 241 ILMASPMAHQTGFMYGLMMPVMLGATAVLQDI-WDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLC 319 (547)
T ss_pred EEEecCchhhhhHHHHHHHHHHcCCeEEeCCC-CCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEE
Confidence 9999999999886 678999999999998763 56788999999999999999999999998766555667889999999
Q ss_pred ecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcc-cccccccccCCCCCceEEEEcCCCCccCCCCCceeEEE
Q 004825 479 TGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLL-QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELA 557 (728)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~ 557 (728)
||+++++++.+++.+.+ +++++|.||+||++...+..... ......++|+|++|++++|+|++++++|.|+. |||+
T Consensus 320 ~G~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~g~~--Gel~ 396 (547)
T PRK13295 320 AGAPIPGALVERARAAL-GAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGAPLPAGQI--GRLQ 396 (547)
T ss_pred ecCCCCHHHHHHHHHHh-CCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCCCCCCCCC--CeEE
Confidence 99999999999988877 58999999999998654333221 11234688999999999999999999999987 9999
Q ss_pred EeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCC
Q 004825 558 LSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSN 637 (728)
Q Consensus 558 v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~ 637 (728)
|++..+.. .|+++++.++.. .+| ||+|||+|++++||.+++.||.|++||++|++|+|.|||++|. .+|.
T Consensus 397 v~g~~~~~-gY~~~~~~t~~~------~~g--~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~-~~~~ 466 (547)
T PRK13295 397 VRGCSNFG-GYLKRPQLNGTD------ADG--WFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLY-RHPA 466 (547)
T ss_pred EEcCcccc-cccCCccccccC------CCC--CeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHH-hCCC
Confidence 97665443 245566666543 124 9999999999999999999999999999999999999999995 8999
Q ss_pred eeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHh-hCCCCcccceEEECCCCCCCCCCchhHHHHH
Q 004825 638 VLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQK-KLNPLFKVSHVVPLPSLPRTATNKVMRRVLR 716 (728)
Q Consensus 638 V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~-~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 716 (728)
|.+++|++++++..| +.+++++++.+ +. ..+..++++ ++++ .|++||+|..++++++||+|.+||++|++|+
T Consensus 467 v~~~~v~~~~~~~~g-~~~~~~v~~~~-~~-~~~~~~l~~----~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~ 539 (547)
T PRK13295 467 IAQVAIVAYPDERLG-ERACAFVVPRP-GQ-SLDFEEMVE----FLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLR 539 (547)
T ss_pred eeeEEEEeeecCCCC-cEEEEEEEeCC-CC-CCCHHHHHH----HHHhccCccccCCcEEEEeccCCCCCCccccHHHHH
Confidence 999999999888777 88999999876 43 344444444 5665 7999999999999999999999999999999
Q ss_pred HHHHh
Q 004825 717 KQLAQ 721 (728)
Q Consensus 717 ~~~~~ 721 (728)
+++++
T Consensus 540 ~~~~~ 544 (547)
T PRK13295 540 EMLRG 544 (547)
T ss_pred HHHhc
Confidence 98865
No 32
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=4.7e-67 Score=596.66 Aligned_cols=505 Identities=20% Similarity=0.205 Sum_probs=402.3
Q ss_pred hHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHH
Q 004825 177 NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNA-LGLDKGSAIAIDMPMNVNSVVIYLAI 255 (728)
Q Consensus 177 ~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~~~vva~lA~ 255 (728)
+....++++ +++|+++|+++...+ .++||+||+++++++|++|++ .|+++||+|+|+++|++++++++|||
T Consensus 41 ~~~~~l~~~--~~~~~~~a~~~~~~~------~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~ 112 (560)
T PLN02574 41 DAVSFIFSH--HNHNGDTALIDSSTG------FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAV 112 (560)
T ss_pred CHHHHHhcC--cccCCCCEEEECCCC------CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHH
Confidence 344556665 579999999975432 279999999999999999999 99999999999999999999999999
Q ss_pred HHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHH
Q 004825 256 VLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLD 335 (728)
Q Consensus 256 lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 335 (728)
+++|++++|++|.++.+++.++++++++++++++..... .+......++.+.... ... ........+.+
T Consensus 113 ~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~ 181 (560)
T PLN02574 113 LSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVE---------KLSPLGVPVIGVPENY-DFD-SKRIEFPKFYE 181 (560)
T ss_pred HHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHH---------HHHhcCCcEEecCccc-ccc-cCccCcccHHH
Confidence 999999999999999999999999999999999875321 1111111222221110 000 00011233444
Q ss_pred HHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHH----hcCC-CCCCEEEecCCcchhh
Q 004825 336 FLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWC----HMDI-RKADIVAWPTNLGWMM 410 (728)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~-~~~d~~l~~~~~~~~~ 410 (728)
+...... ........++++++|+|||||||.||||+++|+++...+..... .+.. ..+++++...|++|..
T Consensus 182 ~~~~~~~----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 257 (560)
T PLN02574 182 LIKEDFD----FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIY 257 (560)
T ss_pred HhhcCCc----ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHH
Confidence 4433211 11223346789999999999999999999999999887765532 2222 3567889999999999
Q ss_pred hH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCC-CCCCCcCeeEEEeecCCCCHHHH
Q 004825 411 GP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCI-DGYDWSSIRCFGSTGEASNVDEY 488 (728)
Q Consensus 411 ~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~-~~~~l~~lr~i~~gGe~l~~~~~ 488 (728)
++ ..++.++..|+++++.+. .++..+++.|+++++|++.++|+++..|++.... ...+++++|.+++||++++++..
T Consensus 258 g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~ 336 (560)
T PLN02574 258 GLSLFVVGLLSLGSTIVVMRR-FDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFI 336 (560)
T ss_pred HHHHHHHHHHhcCCEEEEecC-CCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHH
Confidence 88 456788889999998864 5788999999999999999999999999876432 34568899999999999999999
Q ss_pred HHHHhccCCCCeEecccccccccccccCCc-ccccccccccCCCCCceEEEEc-CCCCccCCCCCceeEEEEeccccCCC
Q 004825 489 LWLMGRALYKPVIEYCGGTEIGGGFITGSL-LQAQSLAAFSTPAMGCKLFILG-NDGCPIPQNVPGMGELALSPLIFGAS 566 (728)
Q Consensus 489 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~v~i~d-~~g~~vp~g~~giGEl~v~~~~~~~~ 566 (728)
+++.+.++++++++.||+||++...+.... .......++|+|++|++++|+| ++|++++.|+. |||+|.+..+..
T Consensus 337 ~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~--Gei~v~g~~~~~- 413 (560)
T PLN02574 337 QDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNC--GELWIQGPGVMK- 413 (560)
T ss_pred HHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCC--eEEEEECcchhh-
Confidence 999888877899999999999865443222 1223457899999999999999 67999999987 999996655443
Q ss_pred ccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEee
Q 004825 567 STLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGV 646 (728)
Q Consensus 567 ~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~ 646 (728)
.|+++++.+++.|..+ | ||+|||+|++++||+++++||.||+||++|++|++.|||++|. .||+|.+++|++.
T Consensus 414 GY~~~~~~t~~~~~~~----g--~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~V~~~~v~~~ 486 (560)
T PLN02574 414 GYLNNPKATQSTIDKD----G--WLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLI-SHPEIIDAAVTAV 486 (560)
T ss_pred hhcCChhHhhhhccCC----C--CcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHH-hCCCcceEEEEcc
Confidence 2466777777777532 3 9999999999999999999999999999999999999999996 9999999999999
Q ss_pred cCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhh
Q 004825 647 PPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 647 ~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 722 (728)
+++..| +.++++|+.++ +. ..+.++ +.++++++|++|++|..++++++||+|++||++|+.|++.+.+.
T Consensus 487 ~~~~~g-~~~~a~v~~~~-~~-~~~~~~----l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~ 555 (560)
T PLN02574 487 PDKECG-EIPVAFVVRRQ-GS-TLSQEA----VINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNS 555 (560)
T ss_pred ccCCCC-cceEEEEEeCC-CC-CCCHHH----HHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhc
Confidence 888777 78999998775 43 344444 45568889999999999999999999999999999999998763
No 33
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.2e-67 Score=595.86 Aligned_cols=511 Identities=20% Similarity=0.203 Sum_probs=414.4
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNAL-GLDKGSAIAIDMPMNVNSVVIYLAIV 256 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-Gv~~gd~Vai~~~~s~~~vva~lA~l 256 (728)
+..++|.++++++|+++|+++.+. ++||+||.++++++|..|.+. |+++|++|+|+++|++++++++|||+
T Consensus 11 tl~~~l~~~a~~~~~~~a~~~~~~--------~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 82 (546)
T PRK08314 11 SLFHNLEVSARRYPDKTAIVFYGR--------AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAIL 82 (546)
T ss_pred CHHHHHHHHHHHcCCCcceeecCc--------eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 355667788899999999999877 999999999999999999999 99999999999999999999999999
Q ss_pred HcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCC-cEEEEcCCCC---Ccc---------
Q 004825 257 LAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAP-LAIVIPAKGS---SFS--------- 323 (728)
Q Consensus 257 kaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~---~~~--------- 323 (728)
++|++++|++|.++.+++.++++++++++++++........ ........ .+++...... ...
T Consensus 83 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (546)
T PRK08314 83 RANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVA-----PAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRA 157 (546)
T ss_pred HcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHH-----HHhhccCcceEEEecchhhcccccccCccccccc
Confidence 99999999999999999999999999999999875432110 11111111 1111110000 000
Q ss_pred -----cccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCC
Q 004825 324 -----MKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKAD 398 (728)
Q Consensus 324 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d 398 (728)
.....+...|.+...... ........++++|+|+|||||||.||||+++|+++++.+......+++..+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d 232 (546)
T PRK08314 158 EPPLQALAPGGVVAWKEALAAGL-----APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPES 232 (546)
T ss_pred ccccccccccccccHHHHhcccC-----CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCc
Confidence 000112334555443211 1123345678999999999999999999999999999888887888999999
Q ss_pred EEEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEE
Q 004825 399 IVAWPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFG 477 (728)
Q Consensus 399 ~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~ 477 (728)
++++..|++|..++ +.++.+|..|+++++.+. .++..++++++++++|++.++|+++..++........+++++|.++
T Consensus 233 ~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~ 311 (546)
T PRK08314 233 VVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPR-WDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIG 311 (546)
T ss_pred eEEEEcCchHHHHHHHHHHHHHHcCCeEEecCC-CCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheee
Confidence 99999999999997 568899999999999874 4677899999999999999999999999876555556678999999
Q ss_pred eecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcC-CCCccCCCCCceeEE
Q 004825 478 STGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGN-DGCPIPQNVPGMGEL 556 (728)
Q Consensus 478 ~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~-~g~~vp~g~~giGEl 556 (728)
+||+++++++.+++.+.++ .++++.||+||++......... .....++|+|++|++++|+|+ ++++++.|.. |||
T Consensus 312 ~gG~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~--Gel 387 (546)
T PRK08314 312 GGGAAMPEAVAERLKELTG-LDYVEGYGLTETMAQTHSNPPD-RPKLQCLGIPTFGVDARVIDPETLEELPPGEV--GEI 387 (546)
T ss_pred eccccCCHHHHHHHHHHcC-CcEEecccccccccceecCCCc-CCCCCccCcccCCeEEEEEeCCCCcCCCCCCc--eEE
Confidence 9999999999999988774 7899999999998654433222 234568999999999999995 5899999986 999
Q ss_pred EEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCC
Q 004825 557 ALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDS 636 (728)
Q Consensus 557 ~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p 636 (728)
+|.+..+.. .|+++++.+++.|..+ +|.+||+|||+|+++++|.++++||.||+||++|++|+|.|||++|. .+|
T Consensus 388 ~v~g~~~~~-gY~~~~~~t~~~f~~~---~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~-~~~ 462 (546)
T PRK08314 388 VVHGPQVFK-GYWNRPEATAEAFIEI---DGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLY-KHP 462 (546)
T ss_pred EEECCchhc-cccCChhHhhhhhhhc---CCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHH-hCc
Confidence 996655433 2456677777777643 35569999999999999999999999999999999999999999995 899
Q ss_pred CeeeeEEEeecCCCCCceEEEEEEEecCCCCC-CCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHH
Q 004825 637 NVLETAAIGVPPPDGGPEQLTIVVVFKDSNYT-PPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVL 715 (728)
Q Consensus 637 ~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~-~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L 715 (728)
+|.+++|++.+++..+ +.+++|+++++ +.+ ..+. +.++++++++|++|++|..++++++||+|+|||++|++|
T Consensus 463 ~v~~~~v~~~~~~~~~-~~~~a~v~~~~-~~~~~~~~----~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L 536 (546)
T PRK08314 463 AIQEACVIATPDPRRG-ETVKAVVVLRP-EARGKTTE----EEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQL 536 (546)
T ss_pred chheEEEEeCCCcccC-ceeEEEEEECC-CCCCCCCH----HHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHH
Confidence 9999999999887776 88999999876 321 1222 345567889999999999999999999999999999999
Q ss_pred HHHHHhh
Q 004825 716 RKQLAQL 722 (728)
Q Consensus 716 ~~~~~~~ 722 (728)
++..++.
T Consensus 537 ~~~~~~~ 543 (546)
T PRK08314 537 QEQEKAR 543 (546)
T ss_pred HHHHhhh
Confidence 8876653
No 34
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.6e-66 Score=590.09 Aligned_cols=502 Identities=19% Similarity=0.203 Sum_probs=405.7
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..+++.++++++|+++|+++.+.+ +++||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 25 ~~~~l~~~~~~~~~~~a~~~~~~~------~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~ 98 (537)
T PLN02246 25 LHDYCFERLSEFSDRPCLIDGATG------RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRR 98 (537)
T ss_pred HHHHHHHHHHhCCCCeEEEecCCC------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHc
Confidence 445566777889999999875321 28999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLE 338 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 338 (728)
|++++|++|.++.+++..++++++++++|+++...... ..........++.++... .....+.++..
T Consensus 99 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~-----~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~ 165 (537)
T PLN02246 99 GAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKL-----KGLAEDDGVTVVTIDDPP--------EGCLHFSELTQ 165 (537)
T ss_pred CEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHH-----HHHhhcCCceEEEeCCCC--------CCceeHHHHhc
Confidence 99999999999999999999999999999987532110 011111111222232111 11233344332
Q ss_pred hhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHH----hcCCCCCCEEEecCCcchhhhH-H
Q 004825 339 RVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWC----HMDIRKADIVAWPTNLGWMMGP-W 413 (728)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~-~ 413 (728)
... ...+.....+++++|++|||||||.||||+++|+++++.+.+... .++++++|+++...|++|.+++ .
T Consensus 166 ~~~----~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~ 241 (537)
T PLN02246 166 ADE----NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNS 241 (537)
T ss_pred CCC----CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHH
Confidence 211 112233456799999999999999999999999999887765433 4678999999999999999998 4
Q ss_pred HHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHh
Q 004825 414 LVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMG 493 (728)
Q Consensus 414 ~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~ 493 (728)
.++.++..|+++++.+. .++..+++.|+++++|++.++|+++..|.+........++++|.+++||+++++++.+++.+
T Consensus 242 ~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~ 320 (537)
T PLN02246 242 VLLCGLRVGAAILIMPK-FEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRA 320 (537)
T ss_pred HHHHHHhcCCEEEEeCC-CCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHH
Confidence 57789999999999865 56788999999999999999999999998766555566789999999999999999999999
Q ss_pred ccCCCCeEecccccccccccccCCc----ccccccccccCCCCCceEEEEcC-CCCccCCCCCceeEEEEeccccCCCcc
Q 004825 494 RALYKPVIEYCGGTEIGGGFITGSL----LQAQSLAAFSTPAMGCKLFILGN-DGCPIPQNVPGMGELALSPLIFGASST 568 (728)
Q Consensus 494 ~~~~~~l~n~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~v~i~d~-~g~~vp~g~~giGEl~v~~~~~~~~~~ 568 (728)
.++++.+++.||+||++.+++.... ......+++|+|+++++++|+|+ .++++|.|+. |||+|.+..+..+ |
T Consensus 321 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~~~G-Y 397 (537)
T PLN02246 321 KLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQP--GEICIRGPQIMKG-Y 397 (537)
T ss_pred HcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCc--eEEEEECCchhcc-c
Confidence 8888889999999999865443211 11223468999999999999995 6899999987 9999966554332 4
Q ss_pred ccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecC
Q 004825 569 LLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPP 648 (728)
Q Consensus 569 ~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~ 648 (728)
+++++.++.+|.. .+||+|||+|++++||+++++||.||+||++|+||+|.|||++|. .||+|.+++|++.++
T Consensus 398 ~~~~~~~~~~~~~------~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~-~~~~v~~~~v~~~~~ 470 (537)
T PLN02246 398 LNDPEATANTIDK------DGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLI-SHPSIADAAVVPMKD 470 (537)
T ss_pred cCCchhhhhcccC------CCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHH-hCCCeeEEEEEcccC
Confidence 5667777766642 239999999999999999999999999999999999999999995 899999999999888
Q ss_pred CCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 649 PDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 649 ~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+..+ +.++++++..+ +. ..+.+ .|+++++++|+.|++|..++++++||+|++||++|++|++++.+
T Consensus 471 ~~~~-~~~~~~v~~~~-~~-~~~~~----~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 471 EVAG-EVPVAFVVRSN-GS-EITED----EIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred ccCC-ceeEEEEEeCC-CC-CCCHH----HHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 7777 78999998876 43 23444 45556888999999999999999999999999999999998753
No 35
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=7e-67 Score=595.24 Aligned_cols=506 Identities=16% Similarity=0.158 Sum_probs=396.9
Q ss_pred hhcccccCCCCCCeEEEEeccCCC--CCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 181 NCLSVNSKRSLDDIVIRWCDEGDG--GLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 181 ~~l~~~~~~~pd~~Al~~~~~~~~--~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..|.++++++|+++|+++.+.++. ...++++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 10 ~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la~~~~ 89 (552)
T PRK09274 10 RHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFALFKA 89 (552)
T ss_pred HHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHHHHHc
Confidence 456777889999999998654210 112347999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhh----cCCcEEEEcCCCCCcccccCCCCcCHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDA----QAPLAIVIPAKGSSFSMKLRDGDISWL 334 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~ 334 (728)
|++++|++|.++.+++.+++++++++++|+++... + ...... .....+.+... .......+.
T Consensus 90 G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~-----~--~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~ 155 (552)
T PRK09274 90 GAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAH-----L--ARRLFGWGKPSVRRLVTVGGR-------LLWGGTTLA 155 (552)
T ss_pred CeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHH-----H--HHHHhccCccchhheeccccc-------cccCCccHH
Confidence 99999999999999999999999999999865210 0 000000 00011111110 001122344
Q ss_pred HHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHH
Q 004825 335 DFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWL 414 (728)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 414 (728)
++..... ..........+++++||+|||||||.||||+++|+++...+.+....++++++|++++..|+.+..
T Consensus 156 ~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~---- 228 (552)
T PRK09274 156 TLLRDGA---AAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALF---- 228 (552)
T ss_pred HhcccCc---cccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhh----
Confidence 4331111 111222345678999999999999999999999999999888888888999999999888876532
Q ss_pred HHHHhhhCcEEEEeCC------CCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHH
Q 004825 415 VYASLLNGASIALYNG------SPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEY 488 (728)
Q Consensus 415 ~~~~L~~G~~lvl~~~------~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~ 488 (728)
.+..|+++++.+. ..++..+++.|+++++|+++++|++++.|.+.......++++||.+++||+++++++.
T Consensus 229 ---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~ 305 (552)
T PRK09274 229 ---GPALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVI 305 (552)
T ss_pred ---hhhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHH
Confidence 3467888888642 2356789999999999999999999999988655455678999999999999999999
Q ss_pred HHHHhccC-CCCeEecccccccccccccCCcc---------cccccccccCCCCCceEEEEcC---------CCCccCCC
Q 004825 489 LWLMGRAL-YKPVIEYCGGTEIGGGFITGSLL---------QAQSLAAFSTPAMGCKLFILGN---------DGCPIPQN 549 (728)
Q Consensus 489 ~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~---------~~~~~~~iG~p~~~~~v~i~d~---------~g~~vp~g 549 (728)
+++.+.++ +++++|.||+||++.+++..... ......++|+|++|++++|+|+ ++++++.|
T Consensus 306 ~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g 385 (552)
T PRK09274 306 ERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATG 385 (552)
T ss_pred HHHHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCC
Confidence 99998886 37999999999998654432211 1112347999999999999984 56789999
Q ss_pred CCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHH
Q 004825 550 VPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIER 629 (728)
Q Consensus 550 ~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~ 629 (728)
+. |||+|.+..+.. .|+++++.|...|..++ .|.+||+|||+|++++||+++++||.||+||++|++|+|.|||+
T Consensus 386 ~~--Gel~v~g~~~~~-GY~~~~~~t~~~~~~~~--~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~ 460 (552)
T PRK09274 386 EI--GEIVVAGPMVTR-SYYNRPEATRLAKIPDG--QGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCER 460 (552)
T ss_pred Ce--eEEEEecCcccc-cccCChHHhhhhhcccC--CCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHH
Confidence 86 999997766543 34667777776665433 24469999999999999999999999999999999999999999
Q ss_pred HHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCC--CC
Q 004825 630 ICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRT--AT 707 (728)
Q Consensus 630 ~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t--~~ 707 (728)
+|. .||+|.+|+|++++++. + +.++++|++.+ +. ..+.+++.+++++.++.. +.++.|..++++++||+| +|
T Consensus 461 ~l~-~~p~V~~~~v~~~~~~~-~-~~~~~~v~~~~-~~-~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~~~~lP~t~~~~ 534 (552)
T PRK09274 461 IFN-THPGVKRSALVGVGVPG-A-QRPVLCVELEP-GV-ACSKSALYQELRALAAAH-PHTAGIERFLIHPSFPVDIRHN 534 (552)
T ss_pred HHH-hCcccceeEEEEeCCCC-C-ceEEEEEEccC-cc-ccchHHHhhhhHHHHHhc-CCCcceeEEeccCCCCcccccc
Confidence 995 99999999999998753 4 67889998876 54 355667888888776554 667889999999999999 79
Q ss_pred CchhHHHHHHHHHh
Q 004825 708 NKVMRRVLRKQLAQ 721 (728)
Q Consensus 708 GKvdR~~L~~~~~~ 721 (728)
|||||++|++++++
T Consensus 535 GKi~r~~L~~~~~~ 548 (552)
T PRK09274 535 AKIFREKLAVWAAK 548 (552)
T ss_pred ccccHHHHHHHHHH
Confidence 99999999998775
No 36
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.2e-66 Score=602.53 Aligned_cols=517 Identities=16% Similarity=0.113 Sum_probs=395.5
Q ss_pred HhhhhcccccCCCCCCeEEEEec-cCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCD-EGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIV 256 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~-~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~l 256 (728)
...++|.++++++|+++|+.+.. ..+..+.++.+||+||.++++++|++|+++|+++||+|+|+++|++++++++|||+
T Consensus 45 tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~ 124 (651)
T PLN02736 45 TLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACS 124 (651)
T ss_pred CHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 45677888899999999996531 11122345679999999999999999999999999999999999999999999999
Q ss_pred HcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCC--cEEEEcCCCCCcc-c--ccCCCC
Q 004825 257 LAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAP--LAIVIPAKGSSFS-M--KLRDGD 330 (728)
Q Consensus 257 kaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~--~~~~i~~~~~~~~-~--~~~~~~ 330 (728)
++|+++||+++.++.+++.+++++++++++|++..... .. ......+. .++++........ . ......
T Consensus 125 ~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~------~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 198 (651)
T PLN02736 125 AYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLN------TLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEI 198 (651)
T ss_pred HcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHH------HHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEE
Confidence 99999999999999999999999999999999865321 11 11122221 2222211100000 0 000113
Q ss_pred cCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhh
Q 004825 331 ISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMM 410 (728)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 410 (728)
..|+++.+..... ........++++|+|+|||||||.||||++||++++..+.+....+++.++|++++++|++|++
T Consensus 199 ~~~~~~~~~~~~~---~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~ 275 (651)
T PLN02736 199 VTYSKLLAQGRSS---PQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIY 275 (651)
T ss_pred EEHHHHHHhcccC---CCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHH
Confidence 4566666543211 1112335689999999999999999999999999999888888888999999999999999999
Q ss_pred hHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC--------------------------
Q 004825 411 GPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC-------------------------- 464 (728)
Q Consensus 411 ~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~-------------------------- 464 (728)
+.+.++.+|..|+++++.++ ++..+++.|+++++|+++++|++++.+.+...
T Consensus 276 ~~~~~~~~l~~G~~i~~~~~--~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (651)
T PLN02736 276 ERVNQIVMLHYGVAVGFYQG--DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALE 353 (651)
T ss_pred HHHHHHHHHHcCCEEEEeCC--CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99888899999999999864 56789999999999999999999988754310
Q ss_pred ---CCCC------------CC-cCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCccccccccccc
Q 004825 465 ---IDGY------------DW-SSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFS 528 (728)
Q Consensus 465 ---~~~~------------~l-~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG 528 (728)
.... .+ +++|.+++||+++++++.+++.+.++ +++++.||+||+++.++.... .....+++|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g-~~~~~~YG~TE~~~~~~~~~~-~~~~~~~vG 431 (651)
T PLN02736 354 NGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFG-GRVLEGYGMTETSCVISGMDE-GDNLSGHVG 431 (651)
T ss_pred cCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhC-CCeEEEechHHhchheeccCC-CCCCCCccC
Confidence 0000 01 47999999999999999998887664 789999999999865544333 224567899
Q ss_pred CCCCCceEEEEcC-CCCc---cCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCce
Q 004825 529 TPAMGCKLFILGN-DGCP---IPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGY 604 (728)
Q Consensus 529 ~p~~~~~v~i~d~-~g~~---vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~ 604 (728)
+|++|++++|+|. ++.. ..++. .|||+|.++.+.. .|+++++.|++.|..+ | ||+|||+|++++||+
T Consensus 432 ~p~pg~~v~i~d~~~~~~~~~~~~~~--~GEl~vrgp~v~~-GY~~~~~~t~~~~~~d----g--w~~TGDlg~~d~dG~ 502 (651)
T PLN02736 432 SPNPACEVKLVDVPEMNYTSEDQPYP--RGEICVRGPIIFK-GYYKDEVQTREVIDED----G--WLHTGDIGLWLPGGR 502 (651)
T ss_pred CccCceEEEEEEccccCcccCCCCCC--CceEEecCCcccc-ccccCHHHHHhhhccC----C--CeeccceEEEcCCCc
Confidence 9999999999983 2221 12222 3999996665433 2567788888888532 3 999999999999999
Q ss_pred EEEEcccCCeeec-CceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCC---------CCCCCC---
Q 004825 605 YRAHGRADDTMNL-GGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDS---------NYTPPD--- 671 (728)
Q Consensus 605 l~~~GR~d~~iki-~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~---------~~~~~~--- 671 (728)
|+|+||.||+||+ +|++|+|.|||++|. .||.|.+|+|++. ..+ +.++|+|+++.. +.+..+
T Consensus 503 l~i~GR~kd~ik~~~G~~V~p~eIE~~l~-~~p~V~~a~V~g~---~~~-~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~ 577 (651)
T PLN02736 503 LKIIDRKKNIFKLAQGEYIAPEKIENVYA-KCKFVAQCFVYGD---SLN-SSLVAVVVVDPEVLKAWAASEGIKYEDLKQ 577 (651)
T ss_pred EEEEEechhheEcCCCcEechHHHHHHHh-cCCCeeEEEEEec---CCC-ceeEEEEEeCHHHHHHHHHHcCCCccCHHH
Confidence 9999999999997 699999999999995 8999999999972 234 689999998641 110011
Q ss_pred ---HHHHHHHHHHHHH-----hhCCCCcccceEEECCCCC------CCCCCchhHHHHHHHHHh
Q 004825 672 ---LNQLRMSFNSAVQ-----KKLNPLFKVSHVVPLPSLP------RTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 672 ---~~~l~~~l~~~l~-----~~Lp~~~~P~~i~~v~~lP------~t~~GKvdR~~L~~~~~~ 721 (728)
..++++.|.+.+. ++|+.|++|..|+++++.| +|++||++|++|++.+++
T Consensus 578 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~ 641 (651)
T PLN02736 578 LCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAK 641 (651)
T ss_pred HhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHH
Confidence 1223333333333 2599999999999999886 799999999999998876
No 37
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.4e-68 Score=523.18 Aligned_cols=503 Identities=18% Similarity=0.203 Sum_probs=421.9
Q ss_pred hhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Q 004825 180 KNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAG 259 (728)
Q Consensus 180 ~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG 259 (728)
.+.|.++|+++||++||+++++ .|||+||+++++++|..|+++||++||+|.+.+||..+++++++|.+|+|
T Consensus 31 ~d~L~~~A~~~pdriAv~d~~~--------~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlG 102 (542)
T COG1021 31 TDILTDHAARYPDRIAVIDGER--------RLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLG 102 (542)
T ss_pred HHHHHHHHhhcCCceEEecCcc--------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcC
Confidence 4568889999999999999988 89999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCC-cEEEEcCCCCCcccccCCCCcCHHHHH
Q 004825 260 YIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAP-LAIVIPAKGSSFSMKLRDGDISWLDFL 337 (728)
Q Consensus 260 ~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ 337 (728)
++.|.--|+....+|.+..+.+.++.+|.++.... ...-++. +.+...+. +.+++..+.... ...+..+.
T Consensus 103 v~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~g-Fd~~~~ar~~~a~~~tlr~v~v~ge~~~~-------~~~~~~~~ 174 (542)
T COG1021 103 VAPVLALPSHRASELGAFASQIEAALLIVARQHSG-FDYRPFARELVAKHPTLRHVIVAGEAEHP-------SVLEAALC 174 (542)
T ss_pred cchhhccchhhHHHHHHHHHhhcchheeechhhcc-cCcHHHHHHHHhhCCcceEEEEccCCCCc-------chhhhhhh
Confidence 99999999999999999999999999999875421 1112222 34444444 333333221111 11111111
Q ss_pred HhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH--HHH
Q 004825 338 ERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP--WLV 415 (728)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~--~~~ 415 (728)
... ....+..+.+++++||...+.||||.||-+..+|.....++....+.++++..+++++..|..|.+.+ -.+
T Consensus 175 ~~a----~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~ 250 (542)
T COG1021 175 HPA----GLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGA 250 (542)
T ss_pred Ccc----ccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcch
Confidence 111 11222355678889999999999999999999999988888888888999999999999999888776 578
Q ss_pred HHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhcc
Q 004825 416 YASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRA 495 (728)
Q Consensus 416 ~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~ 495 (728)
++.+++|+++|+.+. ++++....+|++++||+..++|.+...|++.......+++|||.+-+||..+++++.+++...+
T Consensus 251 LGv~~agG~VVla~~-psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l 329 (542)
T COG1021 251 LGVFLAGGTVVLAPD-PSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL 329 (542)
T ss_pred hheeeeccEEEECCC-CCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh
Confidence 899999999999753 6778889999999999999999999999999888889999999999999999999999998877
Q ss_pred CCCCeEecccccccccccccCCcccccccccccCCC-CCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccc
Q 004825 496 LYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPA-MGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANH 574 (728)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~ 574 (728)
+ |.+-+.+|+.|.-+.++--....+.-..+-|+|+ |.-+++|+|++|++|++|++ |+|...++|--.+ ||.-++.
T Consensus 330 g-C~LQQVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE~--G~LltRGPYTirG-Yyrap~H 405 (542)
T COG1021 330 G-CQLQQVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGEV--GELLTRGPYTIRG-YYRAPEH 405 (542)
T ss_pred C-chHHHHhhhhhhhhcccccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCCc--ceeeecCCeeeee-eccCchh
Confidence 5 9999999999976654432222222345789986 67899999999999999997 9999977664332 4667788
Q ss_pred cccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCce
Q 004825 575 YDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPE 654 (728)
Q Consensus 575 ~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~ 654 (728)
++..|..+. +|+|||++++++||+|.+.||.+|||+.+|++|-.+|||+.|+ .||.|.+|++|+.+|+-.| +
T Consensus 406 Na~aF~a~G------FYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL-~HP~V~~AAlVampDelLG-E 477 (542)
T COG1021 406 NARAFDADG------FYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLL-RHPAVHDAALVAMPDELLG-E 477 (542)
T ss_pred hhhccCcCC------ceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHh-hCchhhhhhhhcCchhhcC-c
Confidence 888898653 8999999999999999999999999999999999999999997 9999999999999999999 9
Q ss_pred EEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 655 QLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+.|||||.++ . .....+|+++|.+ ..|..|++|+.|.+++++|+|+-||||+|+|++.+..
T Consensus 478 ksCAfiv~~~-~--~~~~~qlr~~L~~---~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 478 KSCAFIVVKE-P--PLRAAQLRRFLRE---RGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLAS 538 (542)
T ss_pred ceeEEEEecC-C--CCCHHHHHHHHHH---cchhhhcCCcceeecccCCCcccccccHHHHHHHhhh
Confidence 9999999987 2 3677888887654 5788999999999999999999999999999998865
No 38
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.5e-66 Score=590.09 Aligned_cols=507 Identities=19% Similarity=0.193 Sum_probs=402.2
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNA-LGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
..+.|.++++++|+++|+++.++ .+||+||.++++++|++|.+ .|+++||+|+|+++|++++++++|||++
T Consensus 26 ~~~~l~~~a~~~p~~~al~~~~~--------~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~ 97 (562)
T PRK05677 26 IQAVLKQSCQRFADKPAFSNLGK--------TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMR 97 (562)
T ss_pred HHHHHHHHHHhCCCCeeEEECCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 44667778888999999998766 89999999999999999998 5999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcc--------------
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFS-------------- 323 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------- 323 (728)
+|++++|++|.++.+++.+++++++++++|+++....... +.........+++........
T Consensus 98 ~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (562)
T PRK05677 98 AGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAE-----KVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHV 172 (562)
T ss_pred cCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHH-----HhhhccCcceeEEecccccccchhhhhcccchhhc
Confidence 9999999999999999999999999999999764321100 111111111111111000000
Q ss_pred -----cccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcC--CCC
Q 004825 324 -----MKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMD--IRK 396 (728)
Q Consensus 324 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~ 396 (728)
.........+.+.+..... .........++++++|+|||||||.||||+++|+++...+......+. +..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~ 249 (562)
T PRK05677 173 KKMVPAYHLPQAVKFNDALAKGAG---QPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNE 249 (562)
T ss_pred cccccccCCcccccHHHHHhcCCC---CCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCC
Confidence 0000112233443332211 111223456799999999999999999999999999877665544433 333
Q ss_pred -CCEEEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCee
Q 004825 397 -ADIVAWPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIR 474 (728)
Q Consensus 397 -~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr 474 (728)
.+++++..|+.|..++ +.++.++..|++.++.+...++..+++.|+++++|++..+|+++..++.........++++|
T Consensus 250 ~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr 329 (562)
T PRK05677 250 GCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALK 329 (562)
T ss_pred CccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhce
Confidence 4678899999999987 56778889999888877656778899999999999999999999999876544445678999
Q ss_pred EEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCcee
Q 004825 475 CFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMG 554 (728)
Q Consensus 475 ~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giG 554 (728)
.+++||+++++++.+++.+.+ ++++++.||+||++..+..... .....+++|+|++++.++|+|++++++|.|+. |
T Consensus 330 ~v~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~-~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~--G 405 (562)
T PRK05677 330 LTLSGGMALQLATAERWKEVT-GCAICEGYGMTETSPVVSVNPS-QAIQVGTIGIPVPSTLCKVIDDDGNELPLGEV--G 405 (562)
T ss_pred EEEEcCccCCHHHHHHHHHHc-CCCeeccCCccccCcceeecCc-cCCCCCccCccCCCCEEEEECCCCCCCCCCCC--e
Confidence 999999999999998888765 4899999999998865543332 23345789999999999999999999999986 9
Q ss_pred EEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcC
Q 004825 555 ELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAV 634 (728)
Q Consensus 555 El~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~ 634 (728)
||+|.+..+.. .|+++++.+++.|..+ .||+|||+|++++||.+++.||.||+||++|++|+|.|||++|. .
T Consensus 406 el~v~g~~~~~-gY~~~~~~t~~~~~~~------g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~-~ 477 (562)
T PRK05677 406 ELCVKGPQVMK-GYWQRPEATDEILDSD------GWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLA-A 477 (562)
T ss_pred EEEEecCccch-hhcCCchhhhhccCCC------CcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHH-h
Confidence 99997665543 2466778888777532 39999999999999999999999999999999999999999995 9
Q ss_pred CCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHH
Q 004825 635 DSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRV 714 (728)
Q Consensus 635 ~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~ 714 (728)
||+|.+++|++++++..+ +.++++++.++ +. ..+.+++++ +++++|++|++|..|+++++||+|+|||++|++
T Consensus 478 ~~~v~~~~v~g~~~~~~g-~~~~~~v~~~~-~~-~~~~~~l~~----~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~ 550 (562)
T PRK05677 478 LPGVLQCAAIGVPDEKSG-EAIKVFVVVKP-GE-TLTKEQVME----HMRANLTGYKVPKAVEFRDELPTTNVGKILRRE 550 (562)
T ss_pred CCCccEEEEEeccCccCC-ceEEEEEEeCC-CC-CCCHHHHHH----HHHHhhhhccCCcEEEEeccCCCCCcccccHHH
Confidence 999999999999888777 78899998775 43 345555544 677889999999999999999999999999999
Q ss_pred HHHHHH
Q 004825 715 LRKQLA 720 (728)
Q Consensus 715 L~~~~~ 720 (728)
|+++..
T Consensus 551 L~~~~~ 556 (562)
T PRK05677 551 LRDEEL 556 (562)
T ss_pred HHHHHH
Confidence 998664
No 39
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-66 Score=590.08 Aligned_cols=502 Identities=20% Similarity=0.257 Sum_probs=393.5
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..+.|.++++++|+++|+++.+.+ ..+||+||+++++++|+.|.+.|+++|++|+|+++|++++++++|||+++
T Consensus 16 ~~~~l~~~a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~ 89 (540)
T PRK05857 16 VLDRVFEQARQQPEAIALRRCDGT------SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKL 89 (540)
T ss_pred hHHHHHHHHhhCCCcEEEeecCCC------ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 345567788999999999865431 27999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLE 338 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 338 (728)
|++++|+++.++.+++.+++++++++++|+++........+. ..... ...+.++..... ...... ..
T Consensus 90 G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~--------~~~~~~-~~ 156 (540)
T PRK05857 90 GAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVP--EALHS--IPVIAVDIAAVT--------RESEHS-LD 156 (540)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcccccc--ccccc--cceeEeeccccc--------cccccc-cc
Confidence 999999999999999999999999999999886432111111 00000 011122111000 000000 00
Q ss_pred hhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHH----HhcCCCCCCEEEecCCcchhhhHHH
Q 004825 339 RVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAW----CHMDIRKADIVAWPTNLGWMMGPWL 414 (728)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~----~~~~~~~~d~~l~~~~~~~~~~~~~ 414 (728)
. ..........+++++|++|||||||.||||+++|+++.+...... ..+++..+++++...|++|+.+++.
T Consensus 157 ~-----~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~ 231 (540)
T PRK05857 157 A-----ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWW 231 (540)
T ss_pred c-----cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHH
Confidence 0 000112334678999999999999999999999999877654322 1245667889999999999999988
Q ss_pred HHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhc
Q 004825 415 VYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGR 494 (728)
Q Consensus 415 ~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~ 494 (728)
.+.+++.|+++++.+ .++..+++.|++++||++.++|++++.|++.......+++++|.+++||++++....+++ +.
T Consensus 232 ~~~~l~~G~~~v~~~--~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~-~~ 308 (540)
T PRK05857 232 ILTCLMHGGLCVTGG--ENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRFI-EA 308 (540)
T ss_pred HHHHhhcceeEEecC--CChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHHH-HH
Confidence 889999999987643 466789999999999999999999999988765555678999999999999987776544 44
Q ss_pred cCCCCeEecccccccccccccCCccc----ccccccccCCCCCceEEEEcCCCCc-c-----CCCCCceeEEEEeccccC
Q 004825 495 ALYKPVIEYCGGTEIGGGFITGSLLQ----AQSLAAFSTPAMGCKLFILGNDGCP-I-----PQNVPGMGELALSPLIFG 564 (728)
Q Consensus 495 ~~~~~l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~v~i~d~~g~~-v-----p~g~~giGEl~v~~~~~~ 564 (728)
+ ++++++.||+||++.......... ....+++|+|++|++++|+|++++. + +.|+. |||+|.+..+.
T Consensus 309 ~-g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~--Gel~v~g~~~~ 385 (540)
T PRK05857 309 T-GVRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASF--GTLWIKSPANM 385 (540)
T ss_pred h-CCeeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCc--ceEEEeCcchh
Confidence 4 589999999999985433222111 1235789999999999999988763 3 34554 99999766543
Q ss_pred CCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEE
Q 004825 565 ASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAI 644 (728)
Q Consensus 565 ~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv 644 (728)
.+ |+++++.+.+.|.+ | ||+|||+|++++||+++++||.|++||++|++|+|.|||++|. .||+|.+|+|+
T Consensus 386 ~G-Y~~~~~~t~~~~~~-----g--~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~-~~~~V~~~~v~ 456 (540)
T PRK05857 386 LG-YWNNPERTAEVLID-----G--WVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAE-GVSGVREAACY 456 (540)
T ss_pred hh-hhCCccchhhhcCC-----C--ceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHH-hCCCeeEEEEE
Confidence 32 45677777777742 3 9999999999999999999999999999999999999999995 99999999999
Q ss_pred eecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 645 GVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 645 ~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+.+++..+ +.++++++..+ ..+....+++++.+.+.+++.+++|++|..++++++||+|++||++|++|++.++.
T Consensus 457 ~~~~~~~~-~~~~~~vv~~~-~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~ 531 (540)
T PRK05857 457 EIPDEEFG-ALVGLAVVASA-ELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATA 531 (540)
T ss_pred ecCccccc-cceEEEEEeCC-CCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhh
Confidence 99887766 67778877765 32122346788888888999999999999999999999999999999999999875
No 40
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-66 Score=581.57 Aligned_cols=480 Identities=18% Similarity=0.209 Sum_probs=394.4
Q ss_pred hhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Q 004825 181 NCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGY 260 (728)
Q Consensus 181 ~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~ 260 (728)
+.|.++++++|+++|+++.+. ++||+||.++++++|++|.+.|. +|++|+|+++|++++++++|||+++|+
T Consensus 5 ~~~~~~a~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~ 75 (487)
T PRK07638 5 KEYKKHASLQPNKIAIKENDR--------VLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGW 75 (487)
T ss_pred HHHHHHHHhCCCCeEEecCCc--------EeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCe
Confidence 446778889999999998776 99999999999999999999985 899999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhh
Q 004825 261 IVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERV 340 (728)
Q Consensus 261 ~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (728)
+++|+++.++.+++..++++++++++|++........ .....++.+. .+.+.....
T Consensus 76 ~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~---------~~~~~~~~~~---------------~~~~~~~~~ 131 (487)
T PRK07638 76 TCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLP---------DEEGRVIEID---------------EWKRMIEKY 131 (487)
T ss_pred EEEecCccCCHHHHHHHHHhCCCCEEEEecccccchh---------hccceEEEeh---------------hhhhhhhhc
Confidence 9999999999999999999999999999875321110 0001111110 111111111
Q ss_pred hccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhh
Q 004825 341 RKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLL 420 (728)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~ 420 (728)
. ..........+++++|+|||||||.||||+++|++++..+......++++++|+++...++.|+.+++.++.++.
T Consensus 132 ~----~~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~ 207 (487)
T PRK07638 132 L----PTYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLY 207 (487)
T ss_pred c----ccccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHc
Confidence 0 011112233577899999999999999999999999988888878889999999999999999998888899999
Q ss_pred hCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCe
Q 004825 421 NGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPV 500 (728)
Q Consensus 421 ~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (728)
.|+++++.+. .++..+++.|+++++|++.++|+++..|.+... . ..+.+.++++|+.++.+..+++.+.++++++
T Consensus 208 ~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~-~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~ 282 (487)
T PRK07638 208 VGQTVHLMRK-FIPNQVLDKLETENISVMYTVPTMLESLYKENR---V-IENKMKIISSGAKWEAEAKEKIKNIFPYAKL 282 (487)
T ss_pred cCcEEEEcCC-CCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC---c-CCceeEEEEcCCCCCHHHHHHHHHHcCCCeE
Confidence 9999998754 678899999999999999999999999987632 2 3455667889999999999999988888999
Q ss_pred EecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccc
Q 004825 501 IEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFS 580 (728)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~ 580 (728)
+|.||+||++..+............++|+|++|+.++|+|++|+++|+|+. |||+|.+.....+ |+.+++.+.+.+.
T Consensus 283 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~--Gel~v~~~~~~~g-y~~~~~~~~~~~~ 359 (487)
T PRK07638 283 YEFYGASELSFVTALVDEESERRPNSVGRPFHNVQVRICNEAGEEVQKGEI--GTVYVKSPQFFMG-YIIGGVLARELNA 359 (487)
T ss_pred EEEecCCccCceEEecccccCCCCCCCCcccCCcEEEEECCCCCCCCCCCC--eEEEEecccceee-ecCCHHHHhhhcc
Confidence 999999999876554433333456789999999999999999999999986 9999976655432 3445554444322
Q ss_pred cCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEE
Q 004825 581 GMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVV 660 (728)
Q Consensus 581 ~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~v 660 (728)
+| ||+|||+|++++||+++++||+||+||++|.+|+|.|||++|. .||+|.+|+|++.+++..| +.+++++
T Consensus 360 -----~g--~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v 430 (487)
T PRK07638 360 -----DG--WMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLH-EHPAVDEIVVIGVPDSYWG-EKPVAII 430 (487)
T ss_pred -----CC--cEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHH-hCCCeeeEEEEecCchhcC-CeeEEEE
Confidence 23 9999999999999999999999999999999999999999996 8999999999999887777 7788887
Q ss_pred EecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhhcc
Q 004825 661 VFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQLDQ 724 (728)
Q Consensus 661 v~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~ 724 (728)
+.. .+..+++ +.+++.|+.|++|..++++++||+|++||++|++|++++++..+
T Consensus 431 ~~~------~~~~~l~----~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~ 484 (487)
T PRK07638 431 KGS------ATKQQLK----SFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQEK 484 (487)
T ss_pred ECC------CCHHHHH----HHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhcccc
Confidence 632 2344444 46778899999999999999999999999999999999987554
No 41
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.2e-66 Score=600.88 Aligned_cols=516 Identities=14% Similarity=0.107 Sum_probs=389.6
Q ss_pred hHhhhhcccccCCCCCCeEEEEecc-CCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Q 004825 177 NPAKNCLSVNSKRSLDDIVIRWCDE-GDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAI 255 (728)
Q Consensus 177 ~~~~~~l~~~~~~~pd~~Al~~~~~-~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~ 255 (728)
+...++|.++++++||++|+.+... .+..+.++.+||+||+++++++|++|+++|+++||+|+|+++|+++|++++|||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 3556778888999999999986421 111133456899999999999999999999999999999999999999999999
Q ss_pred HHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC------CcEEEEcCCCCCccc-cc--
Q 004825 256 VLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA------PLAIVIPAKGSSFSM-KL-- 326 (728)
Q Consensus 256 lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~-~~-- 326 (728)
+++|+++||++|.++.+++.+++++++++++|+++.... .+..... ..++.+......... ..
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~--------~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~ 196 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKIS--------ELFKTCPNSTEYMKTVVSFGGVSREQKEEAETF 196 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHH--------HHHHhcccccccceEEEEeCCCChHHhhhhhhc
Confidence 999999999999999999999999999999999864211 1111111 122222211000000 00
Q ss_pred CCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhc-----CCCCCCEEE
Q 004825 327 RDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHM-----DIRKADIVA 401 (728)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l 401 (728)
......+.++....... ........++++|+|+|||||||.||||++||+|++..+.+....+ +++++|+++
T Consensus 197 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l 273 (666)
T PLN02614 197 GLVIYAWDEFLKLGEGK---QYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYL 273 (666)
T ss_pred CcEEEEHHHHHhhcccC---CCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEE
Confidence 00123566655433210 1112234679999999999999999999999999998776654433 578899999
Q ss_pred ecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCC----------------
Q 004825 402 WPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCI---------------- 465 (728)
Q Consensus 402 ~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~---------------- 465 (728)
+++|++|.++....+.++..|+++++.+ .++..+++.|+++++|+++++|++++.+......
T Consensus 274 ~~lPl~H~~~~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a 351 (666)
T PLN02614 274 SYLPLAHIFDRVIEECFIQHGAAIGFWR--GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSA 351 (666)
T ss_pred EeccHHHHHHHHHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 9999999988765667788999999875 3678899999999999999999999987642100
Q ss_pred ---------------CCC-------------CC-cCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccC
Q 004825 466 ---------------DGY-------------DW-SSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITG 516 (728)
Q Consensus 466 ---------------~~~-------------~l-~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~ 516 (728)
... .+ ++||.+++||+++++++ .++.+.+++++++|.||+||+++..+..
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~ 430 (666)
T PLN02614 352 FSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVS 430 (666)
T ss_pred HHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeee
Confidence 000 01 58999999999999875 5566666668999999999987644333
Q ss_pred CcccccccccccCCCCCceEEEEc-CC--CCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEe
Q 004825 517 SLLQAQSLAAFSTPAMGCKLFILG-ND--GCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRH 593 (728)
Q Consensus 517 ~~~~~~~~~~iG~p~~~~~v~i~d-~~--g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~T 593 (728)
.+......+++|+|+||++++|+| ++ +++++.|+. |||+|.++.+.. .||++++.|++.|. +| ||+|
T Consensus 431 ~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~--GEl~vrGp~v~~-GY~~~pe~T~~~f~-----dG--w~~T 500 (666)
T PLN02614 431 LPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPR--GEICIRGKTLFS-GYYKREDLTKEVLI-----DG--WLHT 500 (666)
T ss_pred ccccCCcCCcccCcCCceEEEEeeecccCcccCCCCCC--ceEEEcCCcccc-cccCCHHHhhhhhc-----cC--Cccc
Confidence 332223457999999999999998 33 478899986 999996665443 25678888988884 24 9999
Q ss_pred CceEEEecCceEEEEcccCCeeec-CceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCC-------
Q 004825 594 GDVFERTSGGYYRAHGRADDTMNL-GGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDS------- 665 (728)
Q Consensus 594 GDl~~~~~dG~l~~~GR~d~~iki-~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~------- 665 (728)
||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|. .||.|.+|+|++.... ..++|+|++...
T Consensus 501 GDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~-~~p~V~~~~V~g~~~~----~~l~alvv~~~~~~~~~~~ 575 (666)
T PLN02614 501 GDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYG-EVQAVDSVWVYGNSFE----SFLVAIANPNQQILERWAA 575 (666)
T ss_pred ceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHh-cCCCeeEEEEEecCCc----ceEEEEEeCCHHHHHHHHH
Confidence 999999999999999999999996 799999999999995 9999999999985421 479999987541
Q ss_pred --CCCC-----CCHHHHHHHHHHHH-----HhhCCCCcccceEEECCC-C-----CCCCCCchhHHHHHHHHHh
Q 004825 666 --NYTP-----PDLNQLRMSFNSAV-----QKKLNPLFKVSHVVPLPS-L-----PRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 666 --~~~~-----~~~~~l~~~l~~~l-----~~~Lp~~~~P~~i~~v~~-l-----P~t~~GKvdR~~L~~~~~~ 721 (728)
+... ....++++.+.+.+ ++.|+.|.+++.|..+++ + -+||++|+.|+.+.+.+++
T Consensus 576 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~ 649 (666)
T PLN02614 576 ENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQS 649 (666)
T ss_pred hcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHH
Confidence 1100 11133444444444 457999999999988774 3 3999999999999888876
No 42
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-65 Score=579.64 Aligned_cols=502 Identities=24% Similarity=0.230 Sum_probs=411.8
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
...+.|.+.++.+|+++|+++.+. ++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||++
T Consensus 6 ~i~~~l~~~~~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~ 77 (513)
T PRK07656 6 TLPELLARAARRFGDKEAYVFGDQ--------RLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALK 77 (513)
T ss_pred cHHHHHHHHHHHCCCCeEEEeCCC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 345667778889999999999776 999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCC--cEEEEcCCCCCcccccCCCCcCHHH
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAP--LAIVIPAKGSSFSMKLRDGDISWLD 335 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~ 335 (728)
+|++++|+++.++.+++..++++++++++++++....... ........ ..++........ .......|.+
T Consensus 78 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 149 (513)
T PRK07656 78 AGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDY-----SATTRLPALEHVVICETEEDDP---HTEKMKTFTD 149 (513)
T ss_pred cCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHH-----HHHhccCCccEEEEEcCccccc---CccccccHHH
Confidence 9999999999999999999999999999999875421110 11111111 122222111110 0112345666
Q ss_pred HHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH-HH
Q 004825 336 FLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP-WL 414 (728)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~ 414 (728)
+...... ........++++++|+|||||||.||+|.++|+++.+.+......++++++|++++..|++|++++ ..
T Consensus 150 ~~~~~~~----~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (513)
T PRK07656 150 FLAAGDP----AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAG 225 (513)
T ss_pred HHhcCCC----CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHH
Confidence 6543221 122344677999999999999999999999999999988888888899999999999999999998 45
Q ss_pred HHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhc
Q 004825 415 VYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGR 494 (728)
Q Consensus 415 ~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~ 494 (728)
++.++..|+++++.+. .++..+++.|+++++|++.++|+++..|.+........++++|.+++||+++++++.+++.+.
T Consensus 226 ~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~ 304 (513)
T PRK07656 226 VNAPLMRGATILPLPV-FDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESE 304 (513)
T ss_pred HHHHHHcCceEEecCc-CCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHH
Confidence 8899999999988653 567889999999999999999999999998766666678899999999999999999999888
Q ss_pred cCCCCeEecccccccccccccCCcccccc--cccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCc
Q 004825 495 ALYKPVIEYCGGTEIGGGFITGSLLQAQS--LAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNA 572 (728)
Q Consensus 495 ~~~~~l~n~YG~TE~~~~~~~~~~~~~~~--~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~ 572 (728)
++...++|.||+||+++..+.+....... ..++|+|++|++++|+|+++++++.|.. |||++.+.....+ |++++
T Consensus 305 ~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~g-y~~~~ 381 (513)
T PRK07656 305 LGVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGEV--GELLVRGPNVMKG-YYDDP 381 (513)
T ss_pred cCCCceEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCCc--eEEEEEcchhhhh-hcCCH
Confidence 76338999999999987665544332222 5789999999999999999999999986 9999976654432 34555
Q ss_pred cccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCC
Q 004825 573 NHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGG 652 (728)
Q Consensus 573 ~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g 652 (728)
+.+...|..+ | ||+|||+|++++||.++++||.||+||++|.+|+|.|||++|. .+|+|.+++|++.+++..|
T Consensus 382 ~~~~~~~~~~----~--~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~i~~~~v~~~~~~~~g 454 (513)
T PRK07656 382 EATAAAIDAD----G--WLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLY-EHPAVAEAAVIGVPDERLG 454 (513)
T ss_pred HHHhhhhccC----C--ceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHH-hCCCeeEEEEEecCCcccC
Confidence 6666555422 2 9999999999999999999999999999999999999999995 8999999999999887777
Q ss_pred ceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHH
Q 004825 653 PEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRK 717 (728)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 717 (728)
+.++++++.+. +. ..+..++++ ++++.||++++|..++++++||+|++||++|++|++
T Consensus 455 -~~~~~~v~~~~-~~-~~~~~~l~~----~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 455 -EVGKAYVVLKP-GA-ELTEEELIA----YCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred -ceEEEEEEECC-CC-CCCHHHHHH----HHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 78899998875 33 345554444 678889999999999999999999999999999975
No 43
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.7e-65 Score=583.50 Aligned_cols=516 Identities=18% Similarity=0.193 Sum_probs=415.3
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
...+.|.+.++++|+++|+++.+.+ .++||+||.++++++|++|.+.|+++|++|+|+++|++++++++|||++
T Consensus 17 ~l~~~l~~~~~~~~~~~ai~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~ 90 (559)
T PRK08315 17 TIGQLLDRTAARYPDREALVYRDQG------LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAK 90 (559)
T ss_pred cHHHHHHHHHHHCCCCeEEEEcCCC------eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 3556788888999999999985432 3899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhc-------------C--CcEEEEcCCCCC
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQ-------------A--PLAIVIPAKGSS 321 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~-------------~--~~~~~i~~~~~~ 321 (728)
+|++++|++|..+.+++..++++++++++++++..... ...... +..... . ...+.+...
T Consensus 91 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 166 (559)
T PRK08315 91 IGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDS-DYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDE--- 166 (559)
T ss_pred hCeEEEecCccCCHHHHHHHHHhcCCCEEEEecccccc-chHHHHHHhhhhhhcccccccccccCCCceeEEeeccc---
Confidence 99999999999999999999999999999998754211 000000 000000 0 011111110
Q ss_pred cccccCCCCcCHHHHHHhhhccccC--ccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCE
Q 004825 322 FSMKLRDGDISWLDFLERVRKLKEN--EFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADI 399 (728)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~ 399 (728)
...+...+.++.......... ........+++++|++|||||||.||||.++|+++...+......++++++|+
T Consensus 167 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~ 242 (559)
T PRK08315 167 ----KHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEEDR 242 (559)
T ss_pred ----CCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCCce
Confidence 011234455554432110001 11123356789999999999999999999999999998888888889999999
Q ss_pred EEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEe
Q 004825 400 VAWPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGS 478 (728)
Q Consensus 400 ~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~ 478 (728)
++...|+.|..+. +.++.+|..|+++++.....++..+++.++++++|++.++|+++..++.........+++||.+++
T Consensus 243 ~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~ 322 (559)
T PRK08315 243 LCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIM 322 (559)
T ss_pred EEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEe
Confidence 9999999999887 568899999999997766678889999999999999999999999988766555567889999999
Q ss_pred ecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCccc--ccccccccCCCCCceEEEEcCC-CCccCCCCCceeE
Q 004825 479 TGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQ--AQSLAAFSTPAMGCKLFILGND-GCPIPQNVPGMGE 555 (728)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~~~~~v~i~d~~-g~~vp~g~~giGE 555 (728)
||+++++++++++.+.++..+++|.||+||++..++...... .....++|+|++|+.++|+|++ |++++.|+. ||
T Consensus 323 ~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~--GE 400 (559)
T PRK08315 323 AGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQ--GE 400 (559)
T ss_pred cCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCc--eE
Confidence 999999999999988887667999999999987544333221 2345789999999999999998 999999987 99
Q ss_pred EEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCC
Q 004825 556 LALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVD 635 (728)
Q Consensus 556 l~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~ 635 (728)
|+|.+..+..+ |+++++.++..|.. .+||+|||+|++++||.++++||.|++||++|++|++.|||++|. .+
T Consensus 401 l~v~g~~~~~g-y~~~~~~~~~~~~~------~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~-~~ 472 (559)
T PRK08315 401 LCTRGYSVMKG-YWNDPEKTAEAIDA------DGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLY-TH 472 (559)
T ss_pred EEEECchhhhh-hcCChhHHhhcCCC------CCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHH-hC
Confidence 99976655432 45566667666632 239999999999999999999999999999999999999999996 89
Q ss_pred CCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHH
Q 004825 636 SNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVL 715 (728)
Q Consensus 636 p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L 715 (728)
|+|.+++|++.+++..+ +.++++|+... +. ..+..++ ++.++++||.|++|..++++++||+|++||++|++|
T Consensus 473 ~~v~~~~v~~~~~~~~~-~~~~~~v~~~~-~~-~~~~~~l----~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r~~L 545 (559)
T PRK08315 473 PKIQDVQVVGVPDEKYG-EEVCAWIILRP-GA-TLTEEDV----RDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQKFKM 545 (559)
T ss_pred CCceEEEEEecCCCCCC-eEEEEEEEeCC-CC-CCCHHHH----HHHHHhhcccccCCcEEEEcccCCCCCCCceeHHHH
Confidence 99999999999887766 78899998875 33 2344444 446788899999999999999999999999999999
Q ss_pred HHHHHhhcc
Q 004825 716 RKQLAQLDQ 724 (728)
Q Consensus 716 ~~~~~~~~~ 724 (728)
++++.++.+
T Consensus 546 ~~~~~~~~~ 554 (559)
T PRK08315 546 REMMIEELG 554 (559)
T ss_pred HHHHHhhhc
Confidence 999887543
No 44
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=2.7e-65 Score=580.95 Aligned_cols=504 Identities=19% Similarity=0.212 Sum_probs=402.6
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..+.|.++++++|+++|+.+...+ +.+||+||.++++++|+.|++.|+++|++|+++++|++++++++|||+++
T Consensus 30 ~~~~l~~~a~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 103 (546)
T PLN02330 30 LPDFVLQDAELYADKVAFVEAVTG------KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAA 103 (546)
T ss_pred HHHHHhhhhhcCCCccEEEecCCC------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHh
Confidence 456677888899999999875321 28999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLE 338 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 338 (728)
|++++|+++.++.+++.+++++++++++|+++...... .......+++.... ......|.+++.
T Consensus 104 G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~---------~~~~~~~i~~~~~~-------~~~~~~~~~~~~ 167 (546)
T PLN02330 104 GGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKV---------KGLGLPVIVLGEEK-------IEGAVNWKELLE 167 (546)
T ss_pred CcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhH---------hhcCCcEEEecCCC-------CCCcccHHHHHh
Confidence 99999999999999999999999999999998644221 11122233332211 123345666665
Q ss_pred hhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcC--CCCCCEEEecCCcchhhhHH-HH
Q 004825 339 RVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMD--IRKADIVAWPTNLGWMMGPW-LV 415 (728)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~-~~ 415 (728)
..... ..........++++++|+|||||||.||||+++|+++...+.......+ ....++++...|++|..++. .+
T Consensus 168 ~~~~~-~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~ 246 (546)
T PLN02330 168 AADRA-GDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGIC 246 (546)
T ss_pred hcccc-CcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHH
Confidence 43221 1111223345789999999999999999999999998876643321111 22346788899999998874 57
Q ss_pred HHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCc--CeeEEEeecCCCCHHHHHHHHh
Q 004825 416 YASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWS--SIRCFGSTGEASNVDEYLWLMG 493 (728)
Q Consensus 416 ~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~--~lr~i~~gGe~l~~~~~~~~~~ 493 (728)
+.+|..|+++++.+. .++..+++.++++++|++.++|+++..+++.......+++ ++|.+++||+++++++++++.+
T Consensus 247 ~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~ 325 (546)
T PLN02330 247 CATLRNKGKVVVMSR-FELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEA 325 (546)
T ss_pred HHHhhcCCEEEEecc-cCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHH
Confidence 889999999998864 5778899999999999999999999999876544444444 4799999999999999999998
Q ss_pred ccCCCCeEecccccccccccccCCccc----ccccccccCCCCCceEEEEc-CCCCccCCCCCceeEEEEeccccCCCcc
Q 004825 494 RALYKPVIEYCGGTEIGGGFITGSLLQ----AQSLAAFSTPAMGCKLFILG-NDGCPIPQNVPGMGELALSPLIFGASST 568 (728)
Q Consensus 494 ~~~~~~l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~v~i~d-~~g~~vp~g~~giGEl~v~~~~~~~~~~ 568 (728)
.++++++++.||+||++++........ .....++|+|++|++++|+| ++++++|.|+. |||+|++..+..+ |
T Consensus 326 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~--Gel~v~g~~~~~g-y 402 (546)
T PLN02330 326 KFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTP--GELCVRSQCVMQG-Y 402 (546)
T ss_pred HcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCc--eEEEEecchhhhh-h
Confidence 887899999999999876443221111 12345899999999999999 56899999986 9999976654432 4
Q ss_pred ccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecC
Q 004825 569 LLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPP 648 (728)
Q Consensus 569 ~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~ 648 (728)
+++++.+++.|.. .+||+|||+|++++||.++++||.||+||++|++|+|.|||++|. .+|.|.+++|+++++
T Consensus 403 ~~~~~~~~~~~~~------~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~ 475 (546)
T PLN02330 403 YNNKEETDRTIDE------DGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILL-THPSVEDAAVVPLPD 475 (546)
T ss_pred ccCccchhhhccC------CCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHH-hCCchheEEEEeccc
Confidence 5566666666532 239999999999999999999999999999999999999999995 899999999999988
Q ss_pred CCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhhc
Q 004825 649 PDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQLD 723 (728)
Q Consensus 649 ~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~ 723 (728)
+..| +.++++|+..+ +. ..+.++ ++++++++|+.|++|..++.+++||+|++||++|++|++++..+.
T Consensus 476 ~~~g-~~~~a~v~~~~-~~-~~~~~~----l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~~ 543 (546)
T PLN02330 476 EEAG-EIPAACVVINP-KA-KESEED----ILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSIN 543 (546)
T ss_pred cccC-ceeEEEEEECC-CC-CCCHHH----HHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhhh
Confidence 8777 78999998876 43 234444 555688899999999999999999999999999999999997763
No 45
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=2.7e-65 Score=575.85 Aligned_cols=491 Identities=16% Similarity=0.161 Sum_probs=406.0
Q ss_pred hhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Q 004825 181 NCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGY 260 (728)
Q Consensus 181 ~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~ 260 (728)
+.|.+.++.+|+++|+.+.+. ++||+||.++++++|+.|.+.|+++|++|+|+++++.++++++|||+++|+
T Consensus 4 ~~l~~~a~~~p~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~ 75 (502)
T TIGR01734 4 EAIQAFAETYPQTIAYRYQGQ--------ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGH 75 (502)
T ss_pred HHHHHHHHHCCCceEEEcCCc--------EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCC
Confidence 456777888999999998776 999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhh
Q 004825 261 IVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERV 340 (728)
Q Consensus 261 ~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (728)
+++|+++.++.+++..+++..+++.+++++....... ....+.+.. ..++....
T Consensus 76 ~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----------~~~~~~~~~---------------~~~~~~~~ 129 (502)
T TIGR01734 76 AYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAV-----------GTQIITLSA---------------LEQAETSG 129 (502)
T ss_pred EEeCCCCcChHHHHHHHHHhcCCCEEEeccccccccc-----------CCceEEchH---------------hhhhhhhc
Confidence 9999999999999999999999999999875321100 000111100 00111110
Q ss_pred hccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhh
Q 004825 341 RKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLL 420 (728)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~ 420 (728)
. .........++++++++|||||||.||||+++|+++...+.+....+++..+++++...|++|+.+++.++.++.
T Consensus 130 ~----~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~ 205 (502)
T TIGR01734 130 G----PVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLA 205 (502)
T ss_pred C----CccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHH
Confidence 0 011112345789999999999999999999999999999988888889999999999999999999998999999
Q ss_pred hCcEEEEeCCC--CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCC
Q 004825 421 NGASIALYNGS--PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYK 498 (728)
Q Consensus 421 ~G~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (728)
.|+++++.+.. .++..+++.++++++|.+.++|+++..++.........+++++.++++|++++++..+++.+.++++
T Consensus 206 ~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~ 285 (502)
T TIGR01734 206 SGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKA 285 (502)
T ss_pred CCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCc
Confidence 99999998753 3667899999999999999999999887765444556688999999999999999999999988889
Q ss_pred CeEecccccccccccccCCc----ccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccc
Q 004825 499 PVIEYCGGTEIGGGFITGSL----LQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANH 574 (728)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~ 574 (728)
++++.||+||+++.++.... .......++|.|.+|++++|+|++++++|.|+. |||++.+..+..+ |+++++.
T Consensus 286 ~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~~--Gel~v~g~~~~~g-y~~~~~~ 362 (502)
T TIGR01734 286 TIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGEK--GEIVIVGPSVSKG-YLNNPEK 362 (502)
T ss_pred EEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCCe--eEEEEcccccccc-ccCCccc
Confidence 99999999998764433211 112234579999999999999999999999986 9999966554432 4556777
Q ss_pred cccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeec-CCCCCc
Q 004825 575 YDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVP-PPDGGP 653 (728)
Q Consensus 575 ~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~-~~~~g~ 653 (728)
+...|... +|.+||+|||+|+++++ +++++||.+|+||++|++|+|.|||+++. .+|.|.+|+|++.. +...+
T Consensus 363 ~~~~~~~~---~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~-~~~~v~~~~vv~~~~~~~~~- 436 (502)
T TIGR01734 363 TAEAFFSH---EGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLR-QSSYIESAVVVPKYNKDHKV- 436 (502)
T ss_pred chHhheeC---CCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHH-cCCCccEEEEEEEEcCCCCc-
Confidence 76666432 36679999999999976 99999999999999999999999999995 99999999999875 33334
Q ss_pred eEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHH
Q 004825 654 EQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLA 720 (728)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~ 720 (728)
+.++++++... .. .....++.+.+++.++++||+|++|..++++++||+|++||++|++|+++++
T Consensus 437 ~~~~~~v~~~~-~~-~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 437 EYLIAAIVPET-ED-FEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred eEEEEEEEecc-cc-cccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 78999999876 32 2344566678888999999999999999999999999999999999999875
No 46
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.3e-65 Score=583.04 Aligned_cols=511 Identities=19% Similarity=0.221 Sum_probs=406.7
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..+.++++++++|+++|+++.+. .+||+||.++++++|+.|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 34 l~~~~~~~~~~~p~~~a~~~~~~--------~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~ 105 (573)
T PRK05605 34 LVDLYDNAVARFGDRPALDFFGA--------TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRL 105 (573)
T ss_pred HHHHHHHHHHHCCCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 45667888889999999999766 8999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCC-cEEEEcCCCC-C---------------
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAP-LAIVIPAKGS-S--------------- 321 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~-~--------------- 321 (728)
|++++|++|.++.+++.+++++++++++|+++....... ........ .++.+..... .
T Consensus 106 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (573)
T PRK05605 106 GAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVE-----RLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALR 180 (573)
T ss_pred CcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHH-----hhhhccccceeEeeeccccccccccccccccccccc
Confidence 999999999999999999999999999999775321100 11111111 1111110000 0
Q ss_pred ----cccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcC-C-C
Q 004825 322 ----FSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMD-I-R 395 (728)
Q Consensus 322 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~-~-~ 395 (728)
.......+...|.++..................++++++++|||||||.||+|+++|+++...+......+. + .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 260 (573)
T PRK05605 181 KARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGD 260 (573)
T ss_pred ccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCC
Confidence 000001233456665543211000001223456799999999999999999999999999877665443322 2 3
Q ss_pred CCCEEEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCee
Q 004825 396 KADIVAWPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIR 474 (728)
Q Consensus 396 ~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr 474 (728)
.++++++..|+.|..++ ..++.++..|+++++.+. .++..+++.|+++++|++.++|++++.|++.......+++++|
T Consensus 261 ~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr 339 (573)
T PRK05605 261 GPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPA-PDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVR 339 (573)
T ss_pred CCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCC-CCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhcc
Confidence 47899999999998887 457788999999999864 5778899999999999999999999999987666666789999
Q ss_pred EEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCC--CCccCCCCCc
Q 004825 475 CFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGND--GCPIPQNVPG 552 (728)
Q Consensus 475 ~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~--g~~vp~g~~g 552 (728)
.+++||++++++..+++.+.+ ++++++.||+||+++.+...........+++|+|++|+.++|+|++ +++++.|..
T Consensus 340 ~i~~gg~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~- 417 (573)
T PRK05605 340 NAFSGAMALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEE- 417 (573)
T ss_pred EEEECCCcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCCcccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCe-
Confidence 999999999999998887765 4889999999999876555443333445789999999999999976 588999986
Q ss_pred eeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHh
Q 004825 553 MGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICN 632 (728)
Q Consensus 553 iGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~ 632 (728)
|||++.+..... .|+++++.+.+.|.. | ||+|||+|+++++|+++++||.||+||++|++|+|.|||+++.
T Consensus 418 -Gel~v~~~~~~~-gy~~~~~~~~~~~~~-----g--~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~ 488 (573)
T PRK05605 418 -GELLVRGPQVFK-GYWNRPEETAKSFLD-----G--WFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLR 488 (573)
T ss_pred -eEEEEecCchhh-hhcCChhHhhhcccC-----C--CcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHH
Confidence 999996654432 245566677766642 4 9999999999999999999999999999999999999999996
Q ss_pred cCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhH
Q 004825 633 AVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMR 712 (728)
Q Consensus 633 ~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR 712 (728)
.|+.|.+++|++.+++..+ +.+++++++.+ +. ..+.. .|+++++++|+.+++|..++++++||+|.+||++|
T Consensus 489 -~~~~i~~~~v~~~~~~~~~-~~~~~~vv~~~-~~-~~~~~----~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r 560 (573)
T PRK05605 489 -EHPGVEDAAVVGLPREDGS-EEVVAAVVLEP-GA-ALDPE----GLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRR 560 (573)
T ss_pred -hCcccceEEEEeeecccCC-eEEEEEEEECC-CC-CCCHH----HHHHHHHHhCccccCCcEEEEeccCCCCCcccccH
Confidence 8999999999999887776 89999999876 43 34444 45556888999999999999999999999999999
Q ss_pred HHHHHHHHhh
Q 004825 713 RVLRKQLAQL 722 (728)
Q Consensus 713 ~~L~~~~~~~ 722 (728)
++|++++.+.
T Consensus 561 ~~L~~~~~~~ 570 (573)
T PRK05605 561 REVREELLEK 570 (573)
T ss_pred HHHHHHHHHH
Confidence 9999998763
No 47
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-65 Score=578.42 Aligned_cols=516 Identities=21% Similarity=0.250 Sum_probs=404.0
Q ss_pred CCCCCCCcchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH
Q 004825 168 GQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVN 247 (728)
Q Consensus 168 ~~w~~~~~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~ 247 (728)
.+|......+...++|.++++++|+++|+++.+.. ..+||+||.++++++|++|.+.|+++||+|+|+++|+++
T Consensus 7 ~~~~~~~~~~~l~~~l~~~a~~~p~~~ai~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~ 80 (534)
T PRK05852 7 AAPMASDFGPRIADLVEVAATRLPEAPALVVTADR------IAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAE 80 (534)
T ss_pred ccchhhhhcccHHHHHHHHHHhCCCCcEEEecCCC------CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHH
Confidence 45655666667778899899999999999885531 379999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccC
Q 004825 248 SVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLR 327 (728)
Q Consensus 248 ~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 327 (728)
+++++|||+++|++++|++|.++.+++.+++++++++++|++........ . ..... ....+.+...... .
T Consensus 81 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-~---~~~~~-~~~~~~~~~~~~~-----~ 150 (534)
T PRK05852 81 FVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRA-E---PTTRW-WPLTVNVGGDSGP-----S 150 (534)
T ss_pred HHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhc-c---ccccc-cceeeeecccccc-----c
Confidence 99999999999999999999999999999999999999999864221000 0 00000 0111111111000 0
Q ss_pred CCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcc
Q 004825 328 DGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLG 407 (728)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 407 (728)
...... ....... ...........++++++++|||||||.||||+++|+++.+.+......+++..+|++++..|++
T Consensus 151 ~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 227 (534)
T PRK05852 151 GGTLSV-HLDAATE--PTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLY 227 (534)
T ss_pred cccccc-ccccccC--CCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcc
Confidence 000000 0000000 0000011112247889999999999999999999999999888888888999999999999999
Q ss_pred hhhhHH-HHHHHhhhCcEEEEeCC-CCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCC--CCCCcCeeEEEeecCCC
Q 004825 408 WMMGPW-LVYASLLNGASIALYNG-SPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCID--GYDWSSIRCFGSTGEAS 483 (728)
Q Consensus 408 ~~~~~~-~~~~~L~~G~~lvl~~~-~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~--~~~l~~lr~i~~gGe~l 483 (728)
|..++. .++.++..|+++++.+. ..++..+++.|+++++|++.++|+++..|.+..... ...++++|.++++|+++
T Consensus 228 ~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~ 307 (534)
T PRK05852 228 HGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPL 307 (534)
T ss_pred hhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCC
Confidence 999984 68889999999888653 346678999999999999999999999998764322 23467899999999999
Q ss_pred CHHHHHHHHhccCCCCeEecccccccccccccCCcc----cccccccccCC--CCCceEEEEcCCCCccCCCCCceeEEE
Q 004825 484 NVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLL----QAQSLAAFSTP--AMGCKLFILGNDGCPIPQNVPGMGELA 557 (728)
Q Consensus 484 ~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p--~~~~~v~i~d~~g~~vp~g~~giGEl~ 557 (728)
++++.+++.+.++ +++++.||+||++..++..... ......++|.+ .+|++++|+|++|+++++|+. |||+
T Consensus 308 ~~~~~~~~~~~~~-~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d~~g~~~~~g~~--Gel~ 384 (534)
T PRK05852 308 TAETAQALQTEFA-APVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVGSDGLPLPAGAV--GEVW 384 (534)
T ss_pred CHHHHHHHHHHhC-CChhhccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEEECCCCCCCCCCCc--eEEE
Confidence 9999999888774 8899999999998755433221 01111233443 699999999999999999986 9999
Q ss_pred EeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCC
Q 004825 558 LSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSN 637 (728)
Q Consensus 558 v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~ 637 (728)
|.+..+.. .|+++++.+++.|.. | ||+|||+|++++||++++.||.||+||++|.+|+|.|||++|. .+|+
T Consensus 385 v~g~~v~~-gY~~~~~~t~~~~~~-----g--~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~-~~~~ 455 (534)
T PRK05852 385 LRGTTVVR-GYLGDPTITAANFTD-----G--WLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLA-SHPN 455 (534)
T ss_pred EecCcccc-hhcCCcccchhhhcC-----C--CcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHH-hCCC
Confidence 96665543 245677777777742 3 9999999999999999999999999999999999999999995 8999
Q ss_pred eeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHH
Q 004825 638 VLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRK 717 (728)
Q Consensus 638 V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 717 (728)
|.+|+|++.+++..+ +.++++++..+ +. ..+.++ |.++++++||.|++|..|+++++||+|++||++|++|++
T Consensus 456 V~~~~v~g~~~~~~g-~~~~~~vv~~~-~~-~~~~~~----i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~ 528 (534)
T PRK05852 456 VMEAAVFGVPDQLYG-EAVAAVIVPRE-SA-PPTAEE----LVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAE 528 (534)
T ss_pred eeeEEEEecCCcCcC-ceEEEEEEECC-CC-CCCHHH----HHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHH
Confidence 999999999887777 88999998765 32 244444 445678889999999999999999999999999999999
Q ss_pred HHHh
Q 004825 718 QLAQ 721 (728)
Q Consensus 718 ~~~~ 721 (728)
++..
T Consensus 529 ~~~~ 532 (534)
T PRK05852 529 QFGH 532 (534)
T ss_pred Hhcc
Confidence 8853
No 48
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-64 Score=578.72 Aligned_cols=515 Identities=18% Similarity=0.180 Sum_probs=412.2
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
...++|.+.++++|+++|+++.+.+ +.+||+||.++++++|++|.+.|+++|++|+|++++++++++++|||++
T Consensus 19 ~l~~~l~~~~~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~ 92 (558)
T PRK12583 19 TIGDAFDATVARFPDREALVVRHQA------LRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATAR 92 (558)
T ss_pred cHHHHHHHHHHHCCCCeEEEecCCC------cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 3567888889999999999885432 3899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhh-------------cCCcEEEEcCCCCCcc
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDA-------------QAPLAIVIPAKGSSFS 323 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~i~~~~~~~~ 323 (728)
+|++++|+++.++.+++.+++++++++++|+++..... ...... ..... .+....++......
T Consensus 93 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 169 (558)
T PRK12583 93 IGAILVNINPAYRASELEYALGQSGVRWVICADAFKTS-DYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAP-- 169 (558)
T ss_pred hCCEEEecCCCCCHHHHHHHHHhcCCcEEEEecccccc-chhHHHHHHhhhhccccccccccccCCcceEEEEecCCC--
Confidence 99999999999999999999999999999998754211 111100 11000 00000111110000
Q ss_pred cccCCCCcCHHHHHHhhhccc--cCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEE
Q 004825 324 MKLRDGDISWLDFLERVRKLK--ENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVA 401 (728)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l 401 (728)
......|.+......... ..........++++++++|||||||.||||.++|+++.+.+......++++++|+++
T Consensus 170 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~ 246 (558)
T PRK12583 170 ---PPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLC 246 (558)
T ss_pred ---CccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 112233444433221100 000111234578999999999999999999999999998888887888999999999
Q ss_pred ecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeec
Q 004825 402 WPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTG 480 (728)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gG 480 (728)
...|++|..+. +.++.++..|+++++.....++..+++.++++++|++.++|+++..++........+++++|.+++||
T Consensus 247 ~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G 326 (558)
T PRK12583 247 VPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAG 326 (558)
T ss_pred EecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecC
Confidence 99999999997 56888999999999877667788899999999999999999999988876554556789999999999
Q ss_pred CCCCHHHHHHHHhccCCCCeEecccccccccccccCCcc--cccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEE
Q 004825 481 EASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLL--QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELAL 558 (728)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~--~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v 558 (728)
+++++++.+++.+.++...+++.||+||++.+.+..... ......++|+|++++.++|+|+++++++.|+. |||+|
T Consensus 327 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~--Gel~v 404 (558)
T PRK12583 327 APCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPDGATVPRGEI--GELCT 404 (558)
T ss_pred CCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCCCCCCCCCCe--eEEEE
Confidence 999999999998888777899999999999765443321 12245789999999999999999999999986 99999
Q ss_pred eccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCe
Q 004825 559 SPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNV 638 (728)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V 638 (728)
.+..+.. .|+++++.+...|.. ..||+|||+|++++||.+++.||.|++||++|.+|+|.|||++|. .+|+|
T Consensus 405 ~g~~~~~-gy~~~~~~~~~~~~~------~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v 476 (558)
T PRK12583 405 RGYSVMK-GYWNNPEATAESIDE------DGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLF-THPAV 476 (558)
T ss_pred EeCccch-hhcCChHHHHhhcCC------CCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHH-hCCCe
Confidence 6655433 245566666665532 239999999999999999999999999999999999999999996 89999
Q ss_pred eeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHH
Q 004825 639 LETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQ 718 (728)
Q Consensus 639 ~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~ 718 (728)
.+++|++.+++..+ +.++++++..+ +. ..+..+ |+++++++||+|++|..++.+++||+|++||++|++|+++
T Consensus 477 ~~~~v~~~~~~~~~-~~~~~~v~~~~-~~-~~~~~~----i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~~L~~~ 549 (558)
T PRK12583 477 ADVQVFGVPDEKYG-EEIVAWVRLHP-GH-AASEEE----LREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMREI 549 (558)
T ss_pred eEEEEEeeecCCCC-cEEEEEEEECC-CC-CCCHHH----HHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHHHHHHH
Confidence 99999999887766 88999999876 33 234444 4556888999999999999999999999999999999998
Q ss_pred HHh
Q 004825 719 LAQ 721 (728)
Q Consensus 719 ~~~ 721 (728)
..+
T Consensus 550 ~~~ 552 (558)
T PRK12583 550 SIE 552 (558)
T ss_pred HHh
Confidence 765
No 49
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.8e-65 Score=572.33 Aligned_cols=490 Identities=19% Similarity=0.203 Sum_probs=403.9
Q ss_pred hhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Q 004825 180 KNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAG 259 (728)
Q Consensus 180 ~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG 259 (728)
.++|.++++++|+++|+++.+. .+||.||.++++++|++|.+.|+++|++|+|++++++++++++|||+++|
T Consensus 5 ~~~~~~~~~~~~~~~a~~~~~~--------~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G 76 (497)
T PRK06145 5 SASIAFHARRTPDRAALVYRDQ--------EISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLG 76 (497)
T ss_pred HHHHHHHHHHCCCceEEEECCc--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 3568888899999999999776 99999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHh
Q 004825 260 YIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLER 339 (728)
Q Consensus 260 ~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 339 (728)
++++|+++.++.+++.+++++++++++++++..... . ......+.++... ...+..+..
T Consensus 77 ~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~---------~-~~~~~~~~~~~~~----------~~~~~~~~~- 135 (497)
T PRK06145 77 AVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAI---------V-ALETPKIVIDAAA----------QADSRRLAQ- 135 (497)
T ss_pred cEEEecccccCHHHHHHHHHhcCCcEEEEccchhhh---------h-hcccceEEecCcc----------cchhHHHhc-
Confidence 999999999999999999999999999998754211 0 0011112221100 000111110
Q ss_pred hhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH-HHHHHH
Q 004825 340 VRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP-WLVYAS 418 (728)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (728)
.. ..........++++++++|||||||.||||+++|+++...+......+++..+|+++...|++|..++ +..+.+
T Consensus 136 ~~---~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 212 (497)
T PRK06145 136 GG---LEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAV 212 (497)
T ss_pred cC---CCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHH
Confidence 00 00111223567899999999999999999999999998777666677889999999999999999887 456788
Q ss_pred hhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCC
Q 004825 419 LLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYK 498 (728)
Q Consensus 419 L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (728)
+..|+++++.+. .++..+++.++++++|++.++|+++..++........+++++|.+++|||++++++.+++.+.+++.
T Consensus 213 l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~ 291 (497)
T PRK06145 213 LWVGGTLRIHRE-FDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRA 291 (497)
T ss_pred HhccCEEEECCc-CCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCC
Confidence 999999988764 5788899999999999999999999999887655556678999999999999999999999888888
Q ss_pred CeEecccccccccccccCCcc-cccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCcccccc
Q 004825 499 PVIEYCGGTEIGGGFITGSLL-QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDV 577 (728)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~ 577 (728)
++++.||+||++..++..... .....+++|+|+++++++|+|++++++|.|+. |||++.+..+.. .|+++++.+++
T Consensus 292 ~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~--Gel~v~g~~~~~-Gy~~~~~~~~~ 368 (497)
T PRK06145 292 RYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLPPNMK--GEICMRGPKVTK-GYWKDPEKTAE 368 (497)
T ss_pred ceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCCCCCc--eEEEEECcchhh-hhcCChHHHHH
Confidence 999999999998754433221 12245689999999999999999999999986 999997655432 24556777777
Q ss_pred ccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEE
Q 004825 578 YFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLT 657 (728)
Q Consensus 578 ~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~ 657 (728)
.|.. + ||+|||+|+++.||+++++||.||+||++|++|+|.+||++|. .+|+|.+++|++.+++..+ +.++
T Consensus 369 ~~~~-----~--~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~ 439 (497)
T PRK06145 369 AFYG-----D--WFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIY-ELPEVAEAAVIGVHDDRWG-ERIT 439 (497)
T ss_pred HHhC-----C--CeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHH-hCCCeeEEEEEecCCCccC-ceEE
Confidence 7742 2 9999999999999999999999999999999999999999995 8999999999999887777 7899
Q ss_pred EEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHH
Q 004825 658 IVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLA 720 (728)
Q Consensus 658 a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~ 720 (728)
+++++.+ +. ..+..+ |+++++++|++|++|..++++++||+|++||++|++|+++++
T Consensus 440 ~~v~~~~-~~-~~~~~~----l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 440 AVVVLNP-GA-TLTLEA----LDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred EEEEECC-CC-CCCHHH----HHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 9999875 33 334444 455688889999999999999999999999999999999875
No 50
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.5e-65 Score=572.03 Aligned_cols=477 Identities=21% Similarity=0.248 Sum_probs=396.9
Q ss_pred hhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Q 004825 180 KNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAG 259 (728)
Q Consensus 180 ~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG 259 (728)
.+.|.+++.++||++|+++.++ .+||+||.++++++|++|.+.|+++|++|+|++++++++++++|||+++|
T Consensus 5 ~~~l~~~a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G 76 (483)
T PRK03640 5 PNWLKQRAFLTPDRTAIEFEEK--------KVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLG 76 (483)
T ss_pred HHHHHHHHHhCCCceEEEeCCe--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCC
Confidence 4567788899999999998876 99999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHh
Q 004825 260 YIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLER 339 (728)
Q Consensus 260 ~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 339 (728)
++++|+++.++.+++..++++++++++++++....... .. ....+.++...
T Consensus 77 ~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~---------~~--------------------~~~~~~~~~~~ 127 (483)
T PRK03640 77 AVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLI---------PG--------------------ISVKFAELMNG 127 (483)
T ss_pred cEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHh---------hh--------------------ccccHHHHhhc
Confidence 99999999999999999999999999999874321000 00 01113333222
Q ss_pred hhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHh
Q 004825 340 VRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASL 419 (728)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L 419 (728)
... .........++++++++|||||||.||||+++|+++...+......++++++|++++..|++|..++..++.+|
T Consensus 128 ~~~---~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l 204 (483)
T PRK03640 128 PKE---EAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSV 204 (483)
T ss_pred ccc---cCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHH
Confidence 111 11122345678999999999999999999999999988877777778999999999999999999988889999
Q ss_pred hhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCC
Q 004825 420 LNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKP 499 (728)
Q Consensus 420 ~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~ 499 (728)
..|+++++.+. .++..+++.|+++++|++.++|+++..|.+..... ....++|.+++||+++++...+++.+. +++
T Consensus 205 ~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~ 280 (483)
T PRK03640 205 IYGMRVVLVEK-FDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIP 280 (483)
T ss_pred hcCCEEEecCC-CCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCC
Confidence 99999999874 57789999999999999999999999998654322 234689999999999999998887753 589
Q ss_pred eEecccccccccccccCCcc-cccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccc
Q 004825 500 VIEYCGGTEIGGGFITGSLL-QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVY 578 (728)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~ 578 (728)
+++.||+||++..+...... .....+++|+|+++++++|.|+. +++|.|+. |||+|.+..+..+ |+++++.+...
T Consensus 281 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~~-~~~~~g~~--Gel~v~g~~~~~g-y~~~~~~~~~~ 356 (483)
T PRK03640 281 VYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKDG-VVVPPFEE--GEIVVKGPNVTKG-YLNREDATRET 356 (483)
T ss_pred eeeeeccCcccccccccCcccccccCCCcccccCCcEEEEecCC-CcCCCCCc--eEEEEECcchhhh-hcCCHHHHHHH
Confidence 99999999987644333322 23456789999999999999864 89999987 9999976655432 34566666666
Q ss_pred cccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEE
Q 004825 579 FSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTI 658 (728)
Q Consensus 579 f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a 658 (728)
|.. | ||+|||++++++||.++++||+||++|++|.+|++.|||+++. .+|+|.+++|++.+++..+ ..+++
T Consensus 357 ~~~-----~--~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~-~~~~v~~~~v~~~~~~~~~-~~~~~ 427 (483)
T PRK03640 357 FQD-----G--WFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLL-SHPGVAEAGVVGVPDDKWG-QVPVA 427 (483)
T ss_pred Hhc-----C--CeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeCCCcccC-CceEE
Confidence 642 3 9999999999999999999999999999999999999999995 8999999999998887766 77888
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 659 VVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 659 ~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+++... ..+.++++ +++++.|++|++|..|+.+++||+|++||++|++|++++++
T Consensus 428 ~~~~~~----~~~~~~l~----~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 428 FVVKSG----EVTEEELR----HFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred EEEeCC----CCCHHHHH----HHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 888654 34555544 46788899999999999999999999999999999999875
No 51
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.4e-65 Score=597.82 Aligned_cols=503 Identities=17% Similarity=0.138 Sum_probs=384.1
Q ss_pred hhhhcccccCCCCC-CeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 179 AKNCLSVNSKRSLD-DIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 179 ~~~~l~~~~~~~pd-~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
..++|.++++++|+ ++|+.+.+. +.+||+||.++++++|++|++. +++||+|+|+++|++++++++|||++
T Consensus 206 ~~~~l~~~~~~~p~~~~a~~~~~~-------~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~ 277 (718)
T PRK08043 206 LYEALLSAQYRYGAGKPCIEDVNF-------TPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASL 277 (718)
T ss_pred HHHHHHHHHHHhCCCCcceEcCCC-------CcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHH
Confidence 34567778889998 688875332 2899999999999999999987 59999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC-CcEEEEcCCCCCcccccCCCCcCHHHH
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA-PLAIVIPAKGSSFSMKLRDGDISWLDF 336 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 336 (728)
+|++++|+++.++.+++.+++++++++++|+++.......... ...... ...+.+.... ....+.+.
T Consensus 278 ~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~---------~~~~~~~~ 345 (718)
T PRK08043 278 RRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWH---LPEQLTQVRWVYLEDLK---------DDVTTADK 345 (718)
T ss_pred cCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCC---hhhhhccccEEEhhhhh---------hhcchhHH
Confidence 9999999999999999999999999999999875432111000 000001 1112111100 00111110
Q ss_pred HHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH-HHH
Q 004825 337 LERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP-WLV 415 (728)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~ 415 (728)
..................++++|||+|||||||.||||+++|+++++.+.+....++++++|++++..|++|.++. ..+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~ 425 (718)
T PRK08043 346 LWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGL 425 (718)
T ss_pred HHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHH
Confidence 0000000000111123467999999999999999999999999999988888778899999999999999999987 568
Q ss_pred HHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhcc
Q 004825 416 YASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRA 495 (728)
Q Consensus 416 ~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~ 495 (728)
+.+|..|+++++.+...++..+++.++++++|++..+|+++..+.+.. ...++++||.+++||+++++++.+++.+.+
T Consensus 426 ~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~ 503 (718)
T PRK08043 426 FTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF 503 (718)
T ss_pred HHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc
Confidence 899999999999875445567889999999999999999998876642 335678999999999999999999888776
Q ss_pred CCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCcccc--Ccc
Q 004825 496 LYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLL--NAN 573 (728)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~--~~~ 573 (728)
++++++.||+||++...+...+ .....+++|+|++|++++|+|+++. |.. |||++.+..+..+| ++ +++
T Consensus 504 -g~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~~~i~d~~~~----~~~--Gel~v~g~~v~~GY-~~~e~~~ 574 (718)
T PRK08043 504 -GLRILEGYGVTECAPVVSINVP-MAAKPGTVGRILPGMDARLLSVPGI----EQG--GRLQLKGPNIMNGY-LRVEKPG 574 (718)
T ss_pred -CCCeecccCcccccceEEecCC-cccCCCCCCCcCCCCeeEEecCCCC----CCc--eEEEEecCCccccc-cCCCCcc
Confidence 4899999999999865543322 2235679999999999999998763 343 99999776554322 33 233
Q ss_pred ccccccc-cCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCC
Q 004825 574 HYDVYFS-GMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGG 652 (728)
Q Consensus 574 ~~~~~f~-~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g 652 (728)
.+...+. ........+||+|||+|++|+||+++++||+||+||++|++|+|.|||+++. .|+.+.+++|++.+++..|
T Consensus 575 ~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~-~~~~~~~~avv~~~~~~~g 653 (718)
T PRK08043 575 VLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLAL-GVSPDKQHATAIKSDASKG 653 (718)
T ss_pred cccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHH-hCCccceEEEEEccCCCCC
Confidence 2211111 1100112349999999999999999999999999999999999999999995 8888888888888887777
Q ss_pred ceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhh-CCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhhc
Q 004825 653 PEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKK-LNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQLD 723 (728)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~-Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~ 723 (728)
+.++++++. . ..+.+++++ +++++ |+.||+|..++++++||+|++||+||++|++++.+..
T Consensus 654 -e~~v~~~~~-~----~~~~~~l~~----~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 715 (718)
T PRK08043 654 -EALVLFTTD-S----ELTREKLQQ----YAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDEPE 715 (718)
T ss_pred -ceEEEEEcC-c----ccCHHHHHH----HHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhccc
Confidence 778877642 2 245555544 56666 9999999999999999999999999999999887643
No 52
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=7.8e-65 Score=574.02 Aligned_cols=505 Identities=19% Similarity=0.221 Sum_probs=410.2
Q ss_pred hhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Q 004825 180 KNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAG 259 (728)
Q Consensus 180 ~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG 259 (728)
.++|.++++++|+++|+.+.++ .+||+||.++++++|++|++.|+++|++|+|+++|++++++++|||+++|
T Consensus 3 ~~~~~~~~~~~p~~~a~~~~~~--------~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G 74 (515)
T TIGR03098 3 HHLLEDAAARLPDATALVHHDR--------TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAG 74 (515)
T ss_pred HHHHHHHHHHCCCCeEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 4567778889999999999776 99999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC--CcEEEEcCCCCCcccccCCCCcCHHHHH
Q 004825 260 YIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA--PLAIVIPAKGSSFSMKLRDGDISWLDFL 337 (728)
Q Consensus 260 ~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 337 (728)
++++|+++.++.+++..+++++++++++++....... ........ ..++.+....... ........|.++.
T Consensus 75 ~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 147 (515)
T TIGR03098 75 GVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLL-----HPALPGCHDLRTLILVGEPAHAS--EGGGESPSWPKLL 147 (515)
T ss_pred EEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhh-----HhhhhcccccceEEEecCccccc--CCccccccHHHhh
Confidence 9999999999999999999999999999986432100 01111111 1233333211110 0112234565554
Q ss_pred HhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHH
Q 004825 338 ERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYA 417 (728)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (728)
..... ........+++++++|||||||.||||+++|+++...+......+++..+|++++..|++|++++..++.
T Consensus 148 ~~~~~-----~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~ 222 (515)
T TIGR03098 148 ALGDA-----DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTT 222 (515)
T ss_pred ccccc-----cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHH
Confidence 32211 1223345689999999999999999999999999988888777888999999999999999999988999
Q ss_pred HhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCC
Q 004825 418 SLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALY 497 (728)
Q Consensus 418 ~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~ 497 (728)
++..|+++++.+. .++..+++.++++++|++.++|+++..|.+... ....++++|.+++||+++++++.+++.+.+++
T Consensus 223 ~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~ 300 (515)
T TIGR03098 223 AFYVGATVVLHDY-LLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPN 300 (515)
T ss_pred HHHcCCEEEEcCC-CCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCC
Confidence 9999999998764 577889999999999999999999999987532 22457899999999999999999999988877
Q ss_pred CCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCcccccc
Q 004825 498 KPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDV 577 (728)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~ 577 (728)
+.+++.||+||++...............++|+|++|++++|+|+++++++.|+. |||++.+..+.. .|+++++.+..
T Consensus 301 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~--Gel~v~g~~~~~-gy~~~~~~~~~ 377 (515)
T TIGR03098 301 ARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLREDGSECAPGEE--GELVHRGALVAM-GYWNDPEKTAE 377 (515)
T ss_pred CeEeeeeccccccceEecccccccCCCCCcceecCCCEEEEECCCCCCCCCCCc--eEEEEcCchhhc-cccCCchhhhh
Confidence 899999999998754433222223446789999999999999999999999986 999997665443 23556667777
Q ss_pred ccccCCCC-----CCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCC
Q 004825 578 YFSGMPSR-----NGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGG 652 (728)
Q Consensus 578 ~f~~~p~~-----~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g 652 (728)
.|.+++.. .+.+||+|||+|++++||++++.||.||+||++|.+|+|.|||++|. .||.|.+|+|++.+++..|
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g 456 (515)
T TIGR03098 378 RFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAY-ATGLVAEAVAFGVPDPTLG 456 (515)
T ss_pred hhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHh-cCCCeeEEEEEeccCcccC
Confidence 77655431 23458999999999999999999999999999999999999999996 9999999999999988777
Q ss_pred ceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHH
Q 004825 653 PEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRK 717 (728)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 717 (728)
+.++++++... +. ..+..+ ++++++++|+++++|..++++++||+|.+||++|++|++
T Consensus 457 -~~~~~~~~~~~-~~-~~~~~~----l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 457 -QAIVLVVTPPG-GE-ELDRAA----LLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred -ceEEEEEEeCC-CC-CCCHHH----HHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 88999988654 32 345444 445678889999999999999999999999999999964
No 53
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.2e-65 Score=580.48 Aligned_cols=484 Identities=17% Similarity=0.125 Sum_probs=369.9
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..+.|.++++++|+++|+++.+. +.++++||+||.++++++|++|.++ ++||+|+|+++|++++++++|||+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~----~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~ 77 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRES----GLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLA 77 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCC----CcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHc
Confidence 45567888899999999998764 2356999999999999999999998 89999999999999999999999999
Q ss_pred CcEEEecCCC--------CCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCC
Q 004825 259 GYIVVSIADS--------FASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGD 330 (728)
Q Consensus 259 G~~~vpl~p~--------~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 330 (728)
|+++++ +|. ...+++.+++++++++++|++..... ........+ .+.
T Consensus 78 G~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~-~~~-------------- 132 (525)
T PRK05851 78 GAAVSI-LPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLE---------RLRAVDSSV-TVH-------------- 132 (525)
T ss_pred CCCCcC-CCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHH---------HHHHhhccc-ccc--------------
Confidence 998754 442 23356667899999999999864321 010000000 000
Q ss_pred cCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCC-CCCEEEecCCcchh
Q 004825 331 ISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIR-KADIVAWPTNLGWM 409 (728)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~-~~d~~l~~~~~~~~ 409 (728)
++...... ..........++++|||+|||||||.||||+++|+++++.+.+....++++ ++|+++++.|++|+
T Consensus 133 ----~~~~~~~~--~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 206 (525)
T PRK05851 133 ----DLATAAHT--NRSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHD 206 (525)
T ss_pred ----cccccccc--cccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccC
Confidence 00000000 000011124678999999999999999999999999999988888888998 99999999999999
Q ss_pred hhHHHHHHHhhhCcEEEEeCCC-C--CcchHHHHHHHhCCcEEEecHHHHHHHHcCC-CCCCCCCcCeeEEEeecCCCCH
Q 004825 410 MGPWLVYASLLNGASIALYNGS-P--LGSGFAKFVQDAKVTMLGVVPSIVRTWKSTN-CIDGYDWSSIRCFGSTGEASNV 485 (728)
Q Consensus 410 ~~~~~~~~~L~~G~~lvl~~~~-~--~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~-~~~~~~l~~lr~i~~gGe~l~~ 485 (728)
+++..++.+|+.|+++++.+.. . ++..+++.++++++|++..+|.++..+.... .....++++||.+++||+++++
T Consensus 207 ~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~ 286 (525)
T PRK05851 207 MGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDC 286 (525)
T ss_pred ccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCH
Confidence 9998889999999999997632 2 4567999999999998866665555554322 1234457899999999999999
Q ss_pred HHHHHHHhc---cC--CCCeEecccccccccccccCCcc--------------cccccccccCCCCCceEEEEcCCC-Cc
Q 004825 486 DEYLWLMGR---AL--YKPVIEYCGGTEIGGGFITGSLL--------------QAQSLAAFSTPAMGCKLFILGNDG-CP 545 (728)
Q Consensus 486 ~~~~~~~~~---~~--~~~l~n~YG~TE~~~~~~~~~~~--------------~~~~~~~iG~p~~~~~v~i~d~~g-~~ 545 (728)
++.+++.+. ++ ...++|.||+||++..++...+. ......++|+|++|++++|+|+++ .+
T Consensus 287 ~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~ 366 (525)
T PRK05851 287 DGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAG 366 (525)
T ss_pred HHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCcc
Confidence 998888764 22 23599999999998655432211 012346899999999999999886 46
Q ss_pred cCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHH
Q 004825 546 IPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSV 625 (728)
Q Consensus 546 vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~ 625 (728)
+|.|+. |||+|.+..+..+ |+++++.+ ..+||+|||+|+++ ||.|+|+||+||+||++|+||+|.
T Consensus 367 ~~~g~~--GEl~v~g~~~~~G-Y~~~~~~~-----------~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~ 431 (525)
T PRK05851 367 VAGREI--GEIEIRGASMMSG-YLGQAPID-----------PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPT 431 (525)
T ss_pred CCCCCe--EEEEEecCchhhc-cccCCccC-----------CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHH
Confidence 898886 9999976654332 23333211 12399999999986 899999999999999999999999
Q ss_pred HHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECC--CCC
Q 004825 626 EIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLP--SLP 703 (728)
Q Consensus 626 eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~--~lP 703 (728)
|||++|. .||+|.+|+|++++++..+ +...++++... . ..+.++++++++++|..++ +|+|..+++++ +||
T Consensus 432 eIE~~l~-~~p~V~~~~vv~~~~~~~~-~~~~~~v~~~~-~--~~~~~~~~~~~~~~l~~~l--~~~P~~~~~v~~~~lP 504 (525)
T PRK05851 432 EIERVAA-QVRGVREGAVVAVGTGEGS-ARPGLVIAAEF-R--GPDEAGARSEVVQRVASEC--GVVPSDVVFVAPGSLP 504 (525)
T ss_pred HHHHHHH-hCCCcccceEEEEEecCCC-CceeEEEEEEe-c--CcchHHHHHHHHHHHHHHh--CCCccEEEEECCCCcC
Confidence 9999995 8999999999999887766 56666665542 1 1345667777666666655 38999999998 899
Q ss_pred CCCCCchhHHHHHHHHHh
Q 004825 704 RTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 704 ~t~~GKvdR~~L~~~~~~ 721 (728)
+|+||||+|++|++.+++
T Consensus 505 ~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 505 RTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred cCcchHHHHHHHHHHHHh
Confidence 999999999999998865
No 54
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1.1e-64 Score=575.31 Aligned_cols=504 Identities=19% Similarity=0.220 Sum_probs=398.7
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..+++.++++.+|+++|+++.+.. .+..+.+||+||+++++++|++|++.|+++|++|+++++|++++++++|||+++
T Consensus 24 ~~~~~~~~~~~~p~~~a~~~~~~~--~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 101 (538)
T TIGR03208 24 INDHFDAAVANCPDKPALTAYRDG--HGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARI 101 (538)
T ss_pred HHHHHHHHHHHCCCceEEEeeccc--CCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 446678888899999999874221 112348999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCC--cEEEEcCCCCCcccccCCCCcCHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAP--LAIVIPAKGSSFSMKLRDGDISWLD 335 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~ 335 (728)
|++++|++|.++.+++.+++++++++++++++.... ....... ........ .+++++.. ....+.+
T Consensus 102 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 170 (538)
T TIGR03208 102 GAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRG-FDHAAMARELQSKLPALRQVVVIDGD----------GDDSFDR 170 (538)
T ss_pred CEEEeccCcccCHHHHHHHHHhcCCeEEEEcccccc-ccHHHHHHHHhccCCcceEEEEecCC----------CCcCHHH
Confidence 999999999999999999999999999999875421 0000101 11111111 22222211 1122333
Q ss_pred HHHhhhccc-cC---ccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhh
Q 004825 336 FLERVRKLK-EN---EFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMG 411 (728)
Q Consensus 336 ~~~~~~~~~-~~---~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 411 (728)
++....... +. ........++++|+++|||||||.||||+++|+++...+......++++.+|++++.+|++|..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 250 (538)
T TIGR03208 171 VLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQTG 250 (538)
T ss_pred HhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHHH
Confidence 322111000 00 01112356799999999999999999999999999998888888888999999999999999988
Q ss_pred H-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHH
Q 004825 412 P-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLW 490 (728)
Q Consensus 412 ~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~ 490 (728)
. +.++.++..|+++++.+ ..++..+++.|+++++|++.++|+++..+..........++++|.+++||+++++++.++
T Consensus 251 ~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~ 329 (538)
T TIGR03208 251 FMYGLMMPLILNATAVLQD-IWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVER 329 (538)
T ss_pred HHHHHHHHHHcCCEEEecC-ccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHH
Confidence 6 67889999999999875 357788999999999999999999999887654334456789999999999999999998
Q ss_pred HHhccCCCCeEecccccccccccccCCccc-ccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccc
Q 004825 491 LMGRALYKPVIEYCGGTEIGGGFITGSLLQ-AQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTL 569 (728)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~ 569 (728)
+.+.++ ++++|.||+||++...+...... .....++|+|++|++++|+|+++++++.|+. |||+|.+..... .|+
T Consensus 330 ~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~g~~--Gel~v~g~~~~~-gy~ 405 (538)
T TIGR03208 330 AWELLG-ALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLSQGET--GRLLVRGCSNFG-GYL 405 (538)
T ss_pred HHHHcC-CeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCcCCCC--cEEEEecCcccc-ccc
Confidence 887764 88999999999886544332211 1224578999999999999999999999987 999997665433 234
Q ss_pred cCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCC
Q 004825 570 LNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPP 649 (728)
Q Consensus 570 ~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~ 649 (728)
++++.+. + .+.+||+|||+|++++||.++++||.||+||++|++|+|.|||++|. .||+|.+++|++.+++
T Consensus 406 ~~~~~~~--~------~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~-~~~~v~~~~v~~~~~~ 476 (538)
T TIGR03208 406 KRPHLNS--T------DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLY-QHPAVAQVAIVAYPDE 476 (538)
T ss_pred CCccccc--c------cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHh-cCcceeeEEEEeccCC
Confidence 5555443 1 13359999999999999999999999999999999999999999995 8999999999999887
Q ss_pred CCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHh-hCCCCcccceEEECCCCCCCCCCchhHHHHH
Q 004825 650 DGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQK-KLNPLFKVSHVVPLPSLPRTATNKVMRRVLR 716 (728)
Q Consensus 650 ~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~-~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 716 (728)
..| +.+++++++.. +. ..+..++++ .+++ +++.|++|..++++++||+|++||++|++|+
T Consensus 477 ~~g-~~~~a~v~~~~-~~-~~~~~~l~~----~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 477 RLG-ERACAVVVPKP-GC-TLDFAAMVA----FLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred CCC-ceEEEEEEECC-CC-CCCHHHHHH----HHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 777 88999999876 43 345555554 5654 7999999999999999999999999999986
No 55
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.7e-65 Score=570.88 Aligned_cols=486 Identities=21% Similarity=0.191 Sum_probs=399.5
Q ss_pred hhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Q 004825 181 NCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNA-LGLDKGSAIAIDMPMNVNSVVIYLAIVLAG 259 (728)
Q Consensus 181 ~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG 259 (728)
..|+++++++||++|+++.++ .+||+||.++++++|++|++ .|+++|++|+|+++|++++++++|||+++|
T Consensus 6 ~~~~~~a~~~p~~~a~~~~~~--------~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G 77 (496)
T PRK06839 6 YWIEKRAYLHPDRIAIITEEE--------EMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVE 77 (496)
T ss_pred HHHHHHHHHCCCCeEEEECCc--------eEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 447778899999999998776 99999999999999999986 699999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC-CcEEEEcCCCCCcccccCCCCcCHHHHHH
Q 004825 260 YIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA-PLAIVIPAKGSSFSMKLRDGDISWLDFLE 338 (728)
Q Consensus 260 ~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 338 (728)
++++|+++.++.+++..++++++++++++++....... ....... ...+.+. ++.++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~---------------~~~~~~~ 137 (496)
T PRK06839 78 CIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMAL-----SMQKVSYVQRVISIT---------------SLKEIED 137 (496)
T ss_pred cEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHH-----HhhhccCcceEEEec---------------chHhhhc
Confidence 99999999999999999999999999999875421100 1100000 1111111 1222211
Q ss_pred hhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH-HHHHH
Q 004825 339 RVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP-WLVYA 417 (728)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~ 417 (728)
... .......++++++|+|||||||.||+|+++|+++..........++++.+|+++...|++|..++ ..++.
T Consensus 138 ~~~------~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~ 211 (496)
T PRK06839 138 RKI------DNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFP 211 (496)
T ss_pred cCC------CCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHH
Confidence 110 11223456899999999999999999999999987766666677889999999999999999887 45678
Q ss_pred HhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCC
Q 004825 418 SLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALY 497 (728)
Q Consensus 418 ~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~ 497 (728)
++..|+++++.+ ..++..+++.++++++|++.++|++++.|++.......+++++|.+++||++++++..+++.+. +
T Consensus 212 ~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g 288 (496)
T PRK06839 212 TLFAGGVIIVPR-KFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--G 288 (496)
T ss_pred HHhcCcEEEEcc-CCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--C
Confidence 999999998865 4578889999999999999999999999998765556678899999999999999999888765 5
Q ss_pred CCeEecccccccccccccCCc-ccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccc
Q 004825 498 KPVIEYCGGTEIGGGFITGSL-LQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYD 576 (728)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~ 576 (728)
+++++.||+||++..++.... ......+++|+|+++++++|+|++++.++.|+. |||+|.+..+.. .|+.+++.+.
T Consensus 289 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~-gy~~~~~~~~ 365 (496)
T PRK06839 289 FLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVGEV--GELLIRGPNVMK-EYWNRPDATE 365 (496)
T ss_pred CeeEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCCCc--eEEEEECCCcch-hhcCChHHHH
Confidence 899999999999864433322 222446789999999999999999999999986 999997665432 3455666666
Q ss_pred cccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEE
Q 004825 577 VYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQL 656 (728)
Q Consensus 577 ~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l 656 (728)
..|. +| ||+|||+|++++||.+++.||.||+||++|.+|+|.|||++|. .+|+|.+++|++.+++..| +.+
T Consensus 366 ~~~~-----~g--~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~ 436 (496)
T PRK06839 366 ETIQ-----DG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVIN-KLSDVYEVAVVGRQHVKWG-EIP 436 (496)
T ss_pred HHHc-----CC--CeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccccccC-ceE
Confidence 5553 23 9999999999999999999999999999999999999999996 8999999999999888777 889
Q ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 657 TIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 657 ~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+++|++++ +. ..+..+ |++++++.|+.|++|..|++++++|+|.+||++|++|+++.++
T Consensus 437 ~~~v~~~~-~~-~~~~~~----l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 437 IAFIVKKS-SS-VLIEKD----VIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred EEEEEECC-CC-CCCHHH----HHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 99999876 44 344444 4556888999999999999999999999999999999998764
No 56
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.2e-65 Score=584.39 Aligned_cols=508 Identities=18% Similarity=0.142 Sum_probs=391.5
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
...+.|.++++++|+++|+++.++ ++||+||.++++++|++|.+.|+++|++|+|+++|++++++++|||++
T Consensus 38 tl~~~l~~~a~~~p~~~Ai~~~~~--------~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~ 109 (600)
T PRK08279 38 SLGDVFEEAAARHPDRPALLFEDQ--------SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAK 109 (600)
T ss_pred cHHHHHHHHHHhCCCCcEEEeCCC--------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 455778888899999999999877 999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC-CcEEEEcCCCCCcccccCCCCcCHHHH
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA-PLAIVIPAKGSSFSMKLRDGDISWLDF 336 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 336 (728)
+|++++|+++.++.+++.+++++++++++|+++....... .+..... ...+.+...... .....|.++
T Consensus 110 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 178 (600)
T PRK08279 110 LGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFE-----EARADLARPPRLWVAGGDTL------DDPEGYEDL 178 (600)
T ss_pred cCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHH-----HHhhhhcccceEEEecCccc------cccccHHHH
Confidence 9999999999999999999999999999999875321100 1111111 112222111000 012234444
Q ss_pred HHhhhccccC-ccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHH-H
Q 004825 337 LERVRKLKEN-EFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPW-L 414 (728)
Q Consensus 337 ~~~~~~~~~~-~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~ 414 (728)
.......... ........++++++|+|||||||.||||+++|+++.+.+.+....++++++|++++.+|++|.+++. .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~ 258 (600)
T PRK08279 179 AAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVA 258 (600)
T ss_pred hhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHH
Confidence 3322211110 1112334678999999999999999999999999999998888889999999999999999999985 4
Q ss_pred HHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhc
Q 004825 415 VYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGR 494 (728)
Q Consensus 415 ~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~ 494 (728)
++.+|..|+++++.+ ..++..+++.++++++|++.++|++++.++...........++|.+ +|+.+++++++++.+.
T Consensus 259 ~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~ 335 (600)
T PRK08279 259 WSSVLAAGATLALRR-KFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQR 335 (600)
T ss_pred HHHHHhcCcEEEEcC-CCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHH
Confidence 556777888887765 4677889999999999999999999999987644333345667754 5788999999999988
Q ss_pred cCCCCeEecccccccccccccCCcccccccccccCCCC----Cce---------EEEEcCCC--CccCCCCCceeEEE--
Q 004825 495 ALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAM----GCK---------LFILGNDG--CPIPQNVPGMGELA-- 557 (728)
Q Consensus 495 ~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~----~~~---------v~i~d~~g--~~vp~g~~giGEl~-- 557 (728)
++...++|.||+||++..++.. .....++|++.+ +.. ..|.|.++ .+++.|+. |||+
T Consensus 336 ~~~~~l~~~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~--Gel~~~ 409 (600)
T PRK08279 336 FGIPRILEFYAASEGNVGFINV----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEV--GLLIGR 409 (600)
T ss_pred hCcceeeeeecccccceeeccc----CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCc--eeEEEE
Confidence 8766799999999988643321 123345666554 222 23344443 35788876 9998
Q ss_pred EeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCC
Q 004825 558 LSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSN 637 (728)
Q Consensus 558 v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~ 637 (728)
|.+..+. .+|++++.+...|..+++.++.+||+|||+|++++||.++++||.||+||++|+||+|.|||++|. .||+
T Consensus 410 i~~~~~~--~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~-~~p~ 486 (600)
T PRK08279 410 ITDRGPF--DGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALS-GFPG 486 (600)
T ss_pred ecCcccc--cccCCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHh-cCCC
Confidence 4333322 234777888888877666666789999999999999999999999999999999999999999996 8999
Q ss_pred eeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHH
Q 004825 638 VLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRK 717 (728)
Q Consensus 638 V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 717 (728)
|.+|+|++++++..+....+++++..+ +. ..+.+++ +++++++||.||+|..|+++++||+|+|||++|++|++
T Consensus 487 V~~a~v~gv~~~~~~~~~~~~~vv~~~-~~-~~~~~~l----~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~ 560 (600)
T PRK08279 487 VEEAVVYGVEVPGTDGRAGMAAIVLAD-GA-EFDLAAL----AAHLYERLPAYAVPLFVRLVPELETTGTFKYRKVDLRK 560 (600)
T ss_pred cceEEEEEeecCCCCCccceeEEEecC-Cc-cCCHHHH----HHHHHhhCccccCCeEEEeecCCCCCcchhhhHHHHhh
Confidence 999999998876532245566666654 33 3454444 44688899999999999999999999999999999998
Q ss_pred HHHhh
Q 004825 718 QLAQL 722 (728)
Q Consensus 718 ~~~~~ 722 (728)
++.+.
T Consensus 561 ~~~~~ 565 (600)
T PRK08279 561 EGFDP 565 (600)
T ss_pred cCCCc
Confidence 77664
No 57
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.1e-65 Score=589.78 Aligned_cols=505 Identities=17% Similarity=0.161 Sum_probs=388.6
Q ss_pred hhhhcccccCCCCCCeEEEEeccC-CCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEG-DGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~-~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
..++|+++++++|+++|+++.+.. ...+..+.+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||++
T Consensus 23 l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~lA~~~ 101 (631)
T PRK07769 23 LVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFFGALY 101 (631)
T ss_pred HHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHHHHHH
Confidence 446678888899999999985421 0112345899999999999999999987 89999999999999999999999999
Q ss_pred cCcEEEec-CCCCC--HHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC----CcEEEEcCCCCCcccccCCCC
Q 004825 258 AGYIVVSI-ADSFA--SLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA----PLAIVIPAKGSSFSMKLRDGD 330 (728)
Q Consensus 258 aG~~~vpl-~p~~~--~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~ 330 (728)
+|++++|+ ++..+ .+++.+++++++++++|+++..... + ........ ..++.++... ..
T Consensus 102 ~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~---------~~ 167 (631)
T PRK07769 102 AGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEG---V--RKFFRARPAKERPRVIAVDAVP---------DE 167 (631)
T ss_pred cCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHH---H--HHHHhhccccccceEEEccccc---------cc
Confidence 99999999 56665 6889999999999999998753210 0 01111111 1111111000 00
Q ss_pred cCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhh
Q 004825 331 ISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMM 410 (728)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 410 (728)
.. .........++++++|+|||||||.||||+++|+++...+......++++++|+++++.|++|++
T Consensus 168 ---------~~----~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~ 234 (631)
T PRK07769 168 ---------VG----ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDM 234 (631)
T ss_pred ---------cc----cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCch
Confidence 00 00111234678999999999999999999999999998888777888999999999999999999
Q ss_pred hHHHHHHHhhhCcEEEEeCCC-C--CcchHHHHHHHhCC---cEEEecHHHHHHHHcCC---C--CCCCCCcCeeEEEee
Q 004825 411 GPWLVYASLLNGASIALYNGS-P--LGSGFAKFVQDAKV---TMLGVVPSIVRTWKSTN---C--IDGYDWSSIRCFGST 479 (728)
Q Consensus 411 ~~~~~~~~L~~G~~lvl~~~~-~--~~~~l~~~i~~~~v---t~l~~~Ps~l~~l~~~~---~--~~~~~l~~lr~i~~g 479 (728)
++..++.+++.|+++++..+. . ++..+++.+.++++ +++..+|+++..+.... . ....++++||.+++|
T Consensus 235 gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~g 314 (631)
T PRK07769 235 GLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNG 314 (631)
T ss_pred hhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEec
Confidence 998778888999999988642 2 67788999999886 78999999887765421 1 113568899999999
Q ss_pred cCCCCHHHHHHHHhccC-----CCCeEecccccccccccccCCcccc--------------------------ccccccc
Q 004825 480 GEASNVDEYLWLMGRAL-----YKPVIEYCGGTEIGGGFITGSLLQA--------------------------QSLAAFS 528 (728)
Q Consensus 480 Ge~l~~~~~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~--------------------------~~~~~iG 528 (728)
|+++++++.+++.+.++ ...++|.||+||++..++....... ....++|
T Consensus 315 g~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G 394 (631)
T PRK07769 315 SEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAG 394 (631)
T ss_pred cCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCC
Confidence 99999999999887762 2459999999998765443221100 0124789
Q ss_pred CCCCCceEEEEcC-CCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCC-----------CCCceeEEeCce
Q 004825 529 TPAMGCKLFILGN-DGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPS-----------RNGQILRRHGDV 596 (728)
Q Consensus 529 ~p~~~~~v~i~d~-~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~-----------~~g~~~y~TGDl 596 (728)
+|.+++.++|+|+ +|+++|.|+. |||+|.+..+..+ |+++++.|++.|...+. ..+.+||+|||+
T Consensus 395 ~~~~~~~~~ivd~~~g~~~~~ge~--GEl~v~gp~v~~G-Y~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDl 471 (631)
T PRK07769 395 KVGVSEWAVIVDPETASELPDGQI--GEIWLHGNNIGTG-YWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDY 471 (631)
T ss_pred CcCCCcEEEEEcCCCCcCCCCCCE--EEEEecCCCcccc-ccCChhHHHHHHhhhcccccccccccCcccCCCeeecccc
Confidence 9999999999994 6999999986 9999977655432 46677888888864210 123469999999
Q ss_pred EEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeee--eEEEeecC-------------------CCCCceE
Q 004825 597 FERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLE--TAAIGVPP-------------------PDGGPEQ 655 (728)
Q Consensus 597 ~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~--~~Vv~~~~-------------------~~~g~~~ 655 (728)
|+++ ||+|+|+||.||+||++|+||+|.|||++|.+.||.|.+ ++|+++++ +..| +.
T Consensus 472 g~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~g-e~ 549 (631)
T PRK07769 472 GVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTS-EQ 549 (631)
T ss_pred ccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCC-cc
Confidence 9995 999999999999999999999999999999634899998 89998888 4456 78
Q ss_pred EEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCC-Cc-ccceEEECC--CCCCCCCCchhHHHHHHHHHh
Q 004825 656 LTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNP-LF-KVSHVVPLP--SLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 656 l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~-~~-~P~~i~~v~--~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+++++++.+ +....+.++|.++ ++++|+. |+ .|..+++++ +||+|++|||+|++|++.+.+
T Consensus 550 ~~a~v~~~~-~~~~~~~~~l~~~----~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~ 614 (631)
T PRK07769 550 LVIVAERAP-GAHKLDPQPIADD----IRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLD 614 (631)
T ss_pred EEEEEEecC-ccccccHHHHHHH----HHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHc
Confidence 999999876 4213455666665 5555553 45 477888876 699999999999999998765
No 58
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-65 Score=578.07 Aligned_cols=499 Identities=22% Similarity=0.237 Sum_probs=402.5
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..++|.++++++|+++|+++.+. ++||+||.++++++|+.|++.|+++|++|+|+++++++++++++||+++
T Consensus 9 ~~~~~~~~a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~ 80 (528)
T PRK07470 9 LAHFLRQAARRFPDRIALVWGDR--------SWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRL 80 (528)
T ss_pred HHHHHHHHHHHCCCceEEEECCc--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhC
Confidence 34567788889999999998766 8999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC--CcEEEEcCCCCCcccccCCCCcCHHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA--PLAIVIPAKGSSFSMKLRDGDISWLDF 336 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~ 336 (728)
|++++|+++.++.+++.+++++++++++++++......+ .+..... ..++.+... .....+.++
T Consensus 81 G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 146 (528)
T PRK07470 81 GAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAA-----AVRAASPDLTHVVAIGGA---------RAGLDYEAL 146 (528)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHH-----HHHhhCCcCceEEEeCCC---------cccccHHHH
Confidence 999999999999999999999999999999875431110 1111111 122222111 112345555
Q ss_pred HHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHh--cCCCCCCEEEecCCcchhhhHHH
Q 004825 337 LERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCH--MDIRKADIVAWPTNLGWMMGPWL 414 (728)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~ 414 (728)
...... .........++++++|+|||||||.||||+++|+++...+...... .++..+|+++...|++|..++..
T Consensus 147 ~~~~~~---~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~ 223 (528)
T PRK07470 147 VARHLG---ARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQ 223 (528)
T ss_pred HhcCCC---CCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHH
Confidence 433211 1122334567899999999999999999999999987655433322 25678899999999999999876
Q ss_pred HHHHhhhCcEEEEeCC-CCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHh
Q 004825 415 VYASLLNGASIALYNG-SPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMG 493 (728)
Q Consensus 415 ~~~~L~~G~~lvl~~~-~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~ 493 (728)
++ .++.|++.++++. ..++..+++.|+++++|++.++|++++.+.+.......+++++|.+++||+++++....++.+
T Consensus 224 ~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~ 302 (528)
T PRK07470 224 LC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALA 302 (528)
T ss_pred HH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHH
Confidence 54 6778888877753 356788999999999999999999999998876555567889999999999999999888877
Q ss_pred ccCCCCeEecccccccccccccCCcc-------cccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCC
Q 004825 494 RALYKPVIEYCGGTEIGGGFITGSLL-------QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGAS 566 (728)
Q Consensus 494 ~~~~~~l~n~YG~TE~~~~~~~~~~~-------~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~ 566 (728)
.++ .++++.||+||+++.++..... .....+++|+|++|+.++|+|++|++++.|+. |||++.+.....+
T Consensus 303 ~~g-~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~--Gel~i~~~~~~~g 379 (528)
T PRK07470 303 KLG-KVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGET--GEICVIGPAVFAG 379 (528)
T ss_pred HhC-cHHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCc--eEEEEeCCccchh
Confidence 765 7899999999998654433211 12234688999999999999999999999986 9999976654432
Q ss_pred ccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEee
Q 004825 567 STLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGV 646 (728)
Q Consensus 567 ~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~ 646 (728)
|+++++.++..|.. | ||+|||+|++++||+++++||.||+||++|+||+|.|||++|. .+|.|.+|+|++.
T Consensus 380 -y~~~~~~~~~~~~~-----~--~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~ 450 (528)
T PRK07470 380 -YYNNPEANAKAFRD-----G--WFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLL-THPAVSEVAVLGV 450 (528)
T ss_pred -hcCCHHHHHhhhcC-----C--cEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHH-hCCCceEEEEEec
Confidence 45666777766642 3 9999999999999999999999999999999999999999995 8999999999999
Q ss_pred cCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhh
Q 004825 647 PPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 647 ~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 722 (728)
+++..| +.++++++..+ +. ..+..+ +++++++.||+|++|..++++++||+|++||++|+.|++++++.
T Consensus 451 ~~~~~~-~~~~~~~~~~~-~~-~~~~~~----~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 519 (528)
T PRK07470 451 PDPVWG-EVGVAVCVARD-GA-PVDEAE----LLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEER 519 (528)
T ss_pred cCcccC-ceeEEEEEECC-CC-CCCHHH----HHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhc
Confidence 888766 78888888876 43 245444 44468889999999999999999999999999999999999873
No 59
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.2e-64 Score=574.28 Aligned_cols=496 Identities=20% Similarity=0.198 Sum_probs=400.5
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..+.|.++++++|+++|+++.+. ++||+||.++++++|+.|.+.|+++|++|+|+++|++++++++|||+++
T Consensus 23 l~~~l~~~a~~~p~~~a~~~~~~--------~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~ 94 (542)
T PRK06155 23 LPAMLARQAERYPDRPLLVFGGT--------RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWL 94 (542)
T ss_pred HHHHHHHHHHHCCCCeEEEeCCc--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHh
Confidence 45678889999999999998876 9999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhc--CCcEEEEcCCCCCcccccCCCCcCHHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQ--APLAIVIPAKGSSFSMKLRDGDISWLDF 336 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 336 (728)
|++++|++|.++.+++..+++++++++++++........ ...... ....+.++.... . .....|...
T Consensus 95 G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~ 163 (542)
T PRK06155 95 GAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALE-----AADPGDLPLPAVWLLDAPAS---V---SVPAGWSTA 163 (542)
T ss_pred CCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHH-----HhcccccCcceEEEecCccc---c---ccccccchh
Confidence 999999999999999999999999999999875431110 111100 112233322110 0 000111110
Q ss_pred HHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHH
Q 004825 337 LERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVY 416 (728)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 416 (728)
.. .. ...........++++|+|+|||||||.||||+++|+++..........+++++++++++..|++|..++..++
T Consensus 164 ~~-~~--~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~~ 240 (542)
T PRK06155 164 PL-PP--LDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFF 240 (542)
T ss_pred hh-cc--cCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHHH
Confidence 00 00 0011112334678999999999999999999999999988877777888999999999999999999998889
Q ss_pred HHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccC
Q 004825 417 ASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRAL 496 (728)
Q Consensus 417 ~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~ 496 (728)
.++..|+++++.+. .++..+++.|+++++|++.++|+++..|.+.........+++|.++.|| +++.+.+++.+.++
T Consensus 241 ~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~~ 317 (542)
T PRK06155 241 QALLAGATYVLEPR-FSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERFG 317 (542)
T ss_pred HHHHcCceEEeeCC-CCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHcC
Confidence 99999999998764 4678999999999999999999999999887655555677899887666 56788888877764
Q ss_pred CCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccc---cCCCccccCcc
Q 004825 497 YKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLI---FGASSTLLNAN 573 (728)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~---~~~~~~~~~~~ 573 (728)
.+++|.||+||++.++.... .....+++|.|.++++++|+|++++++|.|+. |||++++.. +.. .|+++++
T Consensus 318 -~~v~~~YG~tE~~~~~~~~~--~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gei~v~~~~~~~~~~-GY~~~~~ 391 (542)
T PRK06155 318 -VDLLDGYGSTETNFVIAVTH--GSQRPGSMGRLAPGFEARVVDEHDQELPDGEP--GELLLRADEPFAFAT-GYFGMPE 391 (542)
T ss_pred -CCEEeeecccccCccccCCC--CCCCCCCcCccCCCceEEEECCCCCCCCCCCc--eEEEEecCCccccch-hhcCCHH
Confidence 88999999999987654432 23456789999999999999999999999986 999996642 221 2455666
Q ss_pred ccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCc
Q 004825 574 HYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGP 653 (728)
Q Consensus 574 ~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~ 653 (728)
.+...|.. | ||+|||+|++++||+++++||.||+||++|.+|+|.|||++|. .||+|.+|+|++++++..+
T Consensus 392 ~~~~~~~~-----~--~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~~v~~~~~~- 462 (542)
T PRK06155 392 KTVEAWRN-----L--WFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLL-SHPAVAAAAVFPVPSELGE- 462 (542)
T ss_pred HHHHhhcC-----C--cEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeecccccC-
Confidence 66666632 3 9999999999999999999999999999999999999999995 8999999999999887666
Q ss_pred eEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHH
Q 004825 654 EQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLA 720 (728)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~ 720 (728)
+.+.+++++.. +. ..+..+++ ++++++|+.|++|..|+++++||+|++||++|++|++++-
T Consensus 463 ~~~~~~v~~~~-~~-~~~~~~~~----~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 463 DEVMAAVVLRD-GT-ALEPVALV----RHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred ceEEEEEEECC-CC-CCCHHHHH----HHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhcc
Confidence 78888888776 44 34555544 4677889999999999999999999999999999998764
No 60
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-64 Score=572.30 Aligned_cols=504 Identities=21% Similarity=0.228 Sum_probs=418.4
Q ss_pred hHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Q 004825 177 NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIV 256 (728)
Q Consensus 177 ~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~l 256 (728)
....++|.++++.+|+++|+.+.+. .+||+||+++++++|+.|.+.|+++|++|+|+++++.++++++|||+
T Consensus 6 ~~l~~~l~~~~~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~ 77 (521)
T PRK06187 6 LTIGRILRHGARKHPDKEAVYFDGR--------RTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVP 77 (521)
T ss_pred CCHHHHHHHHHHHCCCceEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 3466778889999999999999887 89999999999999999999999999999999999999999999999
Q ss_pred HcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcC--CcEEEEcCCCCCcccccCCCCcCH
Q 004825 257 LAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQA--PLAIVIPAKGSSFSMKLRDGDISW 333 (728)
Q Consensus 257 kaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~ 333 (728)
++|++++|+++.++.+++..+++.+++++++++..... .. .+....+ ...+++...... ........+
T Consensus 78 ~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 148 (521)
T PRK06187 78 KIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVP------LLAAILPQLPTVRTVIVEGDGPAA---PLAPEVGEY 148 (521)
T ss_pred HcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHH------HHHHHhhccCCccEEEEecCcccc---ccccccccH
Confidence 99999999999999999999999999999999875421 11 2222221 123333222110 111234455
Q ss_pred HHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHH
Q 004825 334 LDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPW 413 (728)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 413 (728)
.++...... ........++++++++|||||||.||+|.++|+++.+...+....++++++|++++.+|++|..++.
T Consensus 149 ~~~~~~~~~----~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 224 (521)
T PRK06187 149 EELLAAASD----TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWG 224 (521)
T ss_pred HHHhhcCCc----cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHH
Confidence 555443221 2223345678999999999999999999999999999888888889999999999999999999987
Q ss_pred HHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHh
Q 004825 414 LVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMG 493 (728)
Q Consensus 414 ~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~ 493 (728)
..+.++..|+++++++.. ++..+++.|+++++|++.++|++++.|.+........++++|.+++|||++++++.+++.+
T Consensus 225 ~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~ 303 (521)
T PRK06187 225 LPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKE 303 (521)
T ss_pred HHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHH
Confidence 767799999999998764 7788999999999999999999999999877655667889999999999999999999988
Q ss_pred ccCCCCeEecccccccccccccCCcccc-----cccccccCCCCCceEEEEcCCCCccCC--CCCceeEEEEeccccCCC
Q 004825 494 RALYKPVIEYCGGTEIGGGFITGSLLQA-----QSLAAFSTPAMGCKLFILGNDGCPIPQ--NVPGMGELALSPLIFGAS 566 (728)
Q Consensus 494 ~~~~~~l~n~YG~TE~~~~~~~~~~~~~-----~~~~~iG~p~~~~~v~i~d~~g~~vp~--g~~giGEl~v~~~~~~~~ 566 (728)
.+ +++++|.||+||++........... ....++|+|++++.++|+|++++++|. |.. |||++.+.....+
T Consensus 304 ~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~~--Gel~v~~~~~~~~ 380 (521)
T PRK06187 304 KF-GIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGEV--GEIIVRGPWLMQG 380 (521)
T ss_pred Hh-CcchheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCCe--eEEEEECcchhhh
Confidence 77 6899999999999865554433222 256789999999999999999999998 775 9999976654432
Q ss_pred ccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEee
Q 004825 567 STLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGV 646 (728)
Q Consensus 567 ~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~ 646 (728)
|+.+++.+.+.|.. | ||+|||+|++++||.+++.||.|++||++|.+|+|.+||++|. .+++|.+++|++.
T Consensus 381 -y~~~~~~~~~~~~~-----~--~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~ 451 (521)
T PRK06187 381 -YWNRPEATAETIDG-----G--WLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALY-GHPAVAEVAVIGV 451 (521)
T ss_pred -hcCCHHHHHHHhhC-----C--ceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHH-hCCCceEEEEEec
Confidence 34566666666642 3 9999999999999999999999999999999999999999995 8999999999998
Q ss_pred cCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 647 PPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 647 ~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+++..+ +.++++++..+ +. ..+..+++ ++++++|+++++|..++++++||+|++||++|++|++++++
T Consensus 452 ~~~~~~-~~~~~~v~~~~-~~-~~~~~~l~----~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~ 519 (521)
T PRK06187 452 PDEKWG-ERPVAVVVLKP-GA-TLDAKELR----AFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAE 519 (521)
T ss_pred cCCCcC-ceEEEEEEECC-CC-CCCHHHHH----HHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhc
Confidence 887666 78999998876 43 34545444 46788899999999999999999999999999999999874
No 61
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.8e-64 Score=571.97 Aligned_cols=497 Identities=19% Similarity=0.196 Sum_probs=399.0
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..++|.++++++|+++|+++.+. ++||+||.++++++|.+|.+.|+++|++|+|+++|++++++++|||+++
T Consensus 25 l~~~~~~~a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 96 (527)
T TIGR02275 25 LTDILRDQAARYPDAIAIICGNR--------QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKL 96 (527)
T ss_pred HHHHHHHHHHHCCCceEEEeCCc--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence 44667788899999999998776 9999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCC-cEEEEcCCCCCcccccCCCCcCHHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAP-LAIVIPAKGSSFSMKLRDGDISWLDF 336 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 336 (728)
|++++++++..+.+++.+++++++++++++++..... ...... .+....+. ..+.+..... ........
T Consensus 97 G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 167 (527)
T TIGR02275 97 GIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLF-DYDAFARQLQSKLPTLRNIIVAGQTR--------VEAELFLW 167 (527)
T ss_pred CeEEeccccccCHHHHHHHHHhcCCcEEEEcCccccc-chHHHHHHHHhhCCcceEEEEecCCC--------CcchhhHH
Confidence 9999999999999999999999999999998653110 000000 11111111 1112211100 00011111
Q ss_pred HHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHH--H
Q 004825 337 LERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPW--L 414 (728)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~ 414 (728)
..... .........++++++++|||||||.||||+++|+++...+......+.++.+|++++..|++|.+++. .
T Consensus 168 ~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~ 243 (527)
T TIGR02275 168 LESPA----EPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPG 243 (527)
T ss_pred hhCcC----ccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHH
Confidence 11110 11122345679999999999999999999999999999888887888999999999999999988874 5
Q ss_pred HHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhc
Q 004825 415 VYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGR 494 (728)
Q Consensus 415 ~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~ 494 (728)
++.++..|+++++.+. .++..+++.++++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++.+.
T Consensus 244 ~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~ 322 (527)
T TIGR02275 244 ALGVFYAGGCVVLAPD-PSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAV 322 (527)
T ss_pred HHHHHhcCCeEEECCC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHH
Confidence 7899999999988653 577889999999999999999999999987765556678899999999999999999998877
Q ss_pred cCCCCeEecccccccccccccCCcccccccccccCCC-CCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCcc
Q 004825 495 ALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPA-MGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNAN 573 (728)
Q Consensus 495 ~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~ 573 (728)
++ +++++.||+||+++..............++|+|+ ++..++|+|++|++++.|+. |||++.+..... .|+++++
T Consensus 323 ~g-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~--Gei~v~g~~~~~-gY~~~~~ 398 (527)
T TIGR02275 323 FG-CQLQQVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGET--GMLLTRGPYTFR-GYYKAPE 398 (527)
T ss_pred hC-CeEEeeeccCccCccccCCCCccccccccCCCCCCCCceEEEECCCCCCCCCCCc--eEEEecCCccch-hhcCChh
Confidence 74 8999999999976543322211222346889999 48999999999999999987 999996665443 2456677
Q ss_pred ccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCc
Q 004825 574 HYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGP 653 (728)
Q Consensus 574 ~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~ 653 (728)
.+.+.|..+ | ||+|||+|++++||+++++||.||+||++|++|+|.|||++|. .||+|.+++|++.+++..+
T Consensus 399 ~~~~~~~~d----g--~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~~- 470 (527)
T TIGR02275 399 HNAAAFDAE----G--FYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLL-AHPAVHDAALVSMPDELLG- 470 (527)
T ss_pred HhHhhcCcC----C--CEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHH-hCCCceEEEEEecCCcccc-
Confidence 777766543 2 9999999999999999999999999999999999999999995 9999999999999888777
Q ss_pred eEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhh-CCCCcccceEEECCCCCCCCCCchhHHHHH
Q 004825 654 EQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKK-LNPLFKVSHVVPLPSLPRTATNKVMRRVLR 716 (728)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~-Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 716 (728)
+.+++++++.+ +. .+..+++ ++++++ +|+|++|..++++++||+|++||++|++|+
T Consensus 471 ~~~~a~vv~~~-~~--~~~~~l~----~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 471 EKSCAFIVVRD-PA--LKAAQLR----RFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred cEEEEEEEECC-CC--CCHHHHH----HHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 78999998876 32 4445444 467664 999999999999999999999999999874
No 62
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=4.3e-64 Score=566.34 Aligned_cols=495 Identities=21% Similarity=0.225 Sum_probs=403.3
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..+++.+++ .+|+++|+.+.+. +.+||.||.++++++|++|++.|+++||+|++++++++++++++|||+++
T Consensus 5 l~~~~~~~~-~~~~~~a~~~~~~-------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~ 76 (504)
T PRK07514 5 LFDALRAAF-ADRDAPFIETPDG-------LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRA 76 (504)
T ss_pred HHHHHHHHh-hCCCCeEEEeCCC-------CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 445566677 8999999988544 28999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCc-EEEEcCCCCCcccccCCCCcCHHHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPL-AIVIPAKGSSFSMKLRDGDISWLDFL 337 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ 337 (728)
|++++|+++.++.+++..++++++++++++++...... .......... ++.++.. ....+.+..
T Consensus 77 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~-----~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 141 (504)
T PRK07514 77 GAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWL-----SKIAAAAGAPHVETLDAD----------GTGSLLEAA 141 (504)
T ss_pred CcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHH-----HHhhhccCCceEEEecCC----------CcccHHHhh
Confidence 99999999999999999999999999999987543110 0111111111 2222211 111122221
Q ss_pred HhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH-HHHH
Q 004825 338 ERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP-WLVY 416 (728)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~ 416 (728)
.. .+.........+++++||+|||||||.||||+++|+++...+......++++++|++++..|+.|..++ ..++
T Consensus 142 ~~----~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~ 217 (504)
T PRK07514 142 AA----APDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATN 217 (504)
T ss_pred hh----cCcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHH
Confidence 11 111222344567999999999999999999999999999988887778899999999999999998887 5688
Q ss_pred HHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccC
Q 004825 417 ASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRAL 496 (728)
Q Consensus 417 ~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~ 496 (728)
.+++.|+++++.+. .++..+++.+ .++|++..+|+++..+++........++++|.+++||+++++++.+++.+.++
T Consensus 218 ~~l~~G~~~~~~~~-~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~ 294 (504)
T PRK07514 218 VALLAGASMIFLPK-FDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTG 294 (504)
T ss_pred HHHhcCcEEEECCC-CCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhC
Confidence 99999999999864 4677888888 47999999999999998876555667889999999999999999999888764
Q ss_pred CCCeEecccccccccccccCCcccccccccccCCCCCceEEEEc-CCCCccCCCCCceeEEEEeccccCCCccccCcccc
Q 004825 497 YKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILG-NDGCPIPQNVPGMGELALSPLIFGASSTLLNANHY 575 (728)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d-~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~ 575 (728)
.++++.||+||++...... ........++|.|++|++++|+| ++++++|.|+. |||+|.+..+..+ |+.+++.+
T Consensus 295 -~~~~~~YG~tE~~~~~~~~-~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~--Gel~i~~~~~~~g-y~~~~~~~ 369 (504)
T PRK07514 295 -HAILERYGMTETNMNTSNP-YDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEI--GMIEVKGPNVFKG-YWRMPEKT 369 (504)
T ss_pred -CcceeecccccccccccCC-ccccccCcccccCCCCcEEEEEECCCCCCCCCCCc--eEEEEecCCcccc-ccCCchhh
Confidence 7899999999987643322 22223456899999999999999 78999999986 9999976654432 45667777
Q ss_pred ccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceE
Q 004825 576 DVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQ 655 (728)
Q Consensus 576 ~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~ 655 (728)
++.|..+ | ||+|||+|+++++|.++++||.||+||++|++|+|.|||+++. .+++|.+++|++.+++..+ +.
T Consensus 370 ~~~~~~~----~--~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~ 441 (504)
T PRK07514 370 AEEFRAD----G--FFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEID-ELPGVVESAVIGVPHPDFG-EG 441 (504)
T ss_pred hhhcccC----C--CeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHH-hCCCeeEEEEEeCCCCCcC-ce
Confidence 7778643 2 9999999999999999999999999999999999999999995 8999999999999887766 78
Q ss_pred EEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhh
Q 004825 656 LTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 656 l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 722 (728)
++++++... +. ..+..+ +++.++++|++|++|..++.++++|+|++||++|++|+++++++
T Consensus 442 ~~~~~~~~~-~~-~~~~~~----l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 442 VTAVVVPKP-GA-ALDEAA----ILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADL 502 (504)
T ss_pred EEEEEEECC-CC-CCCHHH----HHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 999999876 33 234444 44568888999999999999999999999999999999998764
No 63
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-64 Score=571.65 Aligned_cols=510 Identities=18% Similarity=0.181 Sum_probs=400.4
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
....+|+..+.++|+++++.+... +..+++||.||+++++++|++|.+.|+++||+|+++++|++++++++|||++
T Consensus 11 ~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~ 86 (539)
T PRK07008 11 LISSLIAHAARHAGDTEIVSRRVE----GDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSG 86 (539)
T ss_pred CHHHHHHHHHhhCCCceEEEeecc----CcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHh
Confidence 455678888888899888876422 1234899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCC--cEEEEcCCCCCcccccCCCCcCHH
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAP--LAIVIPAKGSSFSMKLRDGDISWL 334 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~ 334 (728)
+|++++|++|.++.+++.++++++++++++++..... .. .+...... ..+.+..... .... .....+++
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~ 158 (539)
T PRK07008 87 SGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLP------LVDALAPQCPNVKGWVAMTDAAH-LPAG-STPLLCYE 158 (539)
T ss_pred cCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHH------HHHHHHhhCCCceEEEEEccCCc-cccC-CcccccHH
Confidence 9999999999999999999999999999999865321 11 11111111 1122221111 0000 11234555
Q ss_pred HHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHH--HHHHhcCCCCCCEEEecCCcchhhhH
Q 004825 335 DFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAA--DAWCHMDIRKADIVAWPTNLGWMMGP 412 (728)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~~~ 412 (728)
++...... ........++++++++|||||||.||||+++|++++.... .....++++++|+++...|++|..+.
T Consensus 159 ~l~~~~~~----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~ 234 (539)
T PRK07008 159 TLVGAQDG----DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAW 234 (539)
T ss_pred HHhcccCC----CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhH
Confidence 55433211 1112245678899999999999999999999999864332 22345778899999999999988777
Q ss_pred HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHH
Q 004825 413 WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLM 492 (728)
Q Consensus 413 ~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~ 492 (728)
..++.++..|+++++.+...++..+++.+++++||++.++|+++..|++.......+++++|.+++||+++++++.+++.
T Consensus 235 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~ 314 (539)
T PRK07008 235 GLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFE 314 (539)
T ss_pred HHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHH
Confidence 66688999999999987666788899999999999999999999999887655556788999999999999999999998
Q ss_pred hccCCCCeEecccccccccccccCCcc------cc----cccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccc
Q 004825 493 GRALYKPVIEYCGGTEIGGGFITGSLL------QA----QSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLI 562 (728)
Q Consensus 493 ~~~~~~~l~n~YG~TE~~~~~~~~~~~------~~----~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~ 562 (728)
+.+ ++++++.||+||++...+..... .. ....++|+|++|++++|+|++++++|.+...+|||++++..
T Consensus 315 ~~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~~~~~~~~~~Gei~v~g~~ 393 (539)
T PRK07008 315 DEY-GVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGRELPWDGKAFGDLQVRGPW 393 (539)
T ss_pred HHh-CCceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCCCccCCCCCcceEEEEeCCc
Confidence 777 48999999999998654332211 00 11357899999999999999999998653235999997766
Q ss_pred cCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeE
Q 004825 563 FGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETA 642 (728)
Q Consensus 563 ~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~ 642 (728)
+.. .|+++++ ..| ..| ||+|||+|++++||.++++||+||+||++|++|+|.|||++|. .||.|.+++
T Consensus 394 ~~~-gy~~~~~---~~~-----~~g--~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~v~~~~ 461 (539)
T PRK07008 394 VID-RYFRGDA---SPL-----VDG--WFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAV-AHPAVAEAA 461 (539)
T ss_pred cch-hhcCChh---hhh-----cCC--CcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHH-hCCceeEEE
Confidence 543 2333331 122 233 9999999999999999999999999999999999999999995 999999999
Q ss_pred EEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhh
Q 004825 643 AIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 643 Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 722 (728)
|++++++..+ +.++++|+..+ +. ..+.+ .++++++++|++|++|..|+++++||+|++||++|++|++++++.
T Consensus 462 v~~~~~~~~~-~~~~~~v~~~~-~~-~~~~~----~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~ 534 (539)
T PRK07008 462 CIACAHPKWD-ERPLLVVVKRP-GA-EVTRE----ELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDY 534 (539)
T ss_pred EEecCCchhc-cceEEEEEeCC-CC-ccCHH----HHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhh
Confidence 9999887766 78888888765 43 23444 455568888999999999999999999999999999999999875
Q ss_pred c
Q 004825 723 D 723 (728)
Q Consensus 723 ~ 723 (728)
.
T Consensus 535 ~ 535 (539)
T PRK07008 535 V 535 (539)
T ss_pred c
Confidence 4
No 64
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.8e-65 Score=588.10 Aligned_cols=517 Identities=16% Similarity=0.116 Sum_probs=385.7
Q ss_pred hHhhhhcccccCCCCCCeEEEEecc-CCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Q 004825 177 NPAKNCLSVNSKRSLDDIVIRWCDE-GDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAI 255 (728)
Q Consensus 177 ~~~~~~l~~~~~~~pd~~Al~~~~~-~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~ 255 (728)
....++|.+.++++|+++|+.+... .+..+.++.+||+||.++++++|++|.++|+++||+|+|+++|+++|++++|||
T Consensus 43 ~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 122 (660)
T PLN02861 43 DSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (660)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 3456778888999999999976411 011234568999999999999999999999999999999999999999999999
Q ss_pred HHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcC---CcEEEEcCCCCCccc---ccCC
Q 004825 256 VLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQA---PLAIVIPAKGSSFSM---KLRD 328 (728)
Q Consensus 256 lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~---~~~~~i~~~~~~~~~---~~~~ 328 (728)
+++|+++|||++.++.+++.++|++++++++|+++... ... ....... ..++.+......... ....
T Consensus 123 ~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~------~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~ 196 (660)
T PLN02861 123 NSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKI------SSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGV 196 (660)
T ss_pred HHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHH------HHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCc
Confidence 99999999999999999999999999999999976431 111 1111111 122222211100000 0001
Q ss_pred CCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcC-----CCCCCEEEec
Q 004825 329 GDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMD-----IRKADIVAWP 403 (728)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~-----~~~~d~~l~~ 403 (728)
...+|.++...... ........++++|+|+|||||||.||||+++|++++..+......++ +.++|+++++
T Consensus 197 ~~~~~~~~~~~~~~----~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~ 272 (660)
T PLN02861 197 SCFSWEEFSLMGSL----DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSY 272 (660)
T ss_pred EEEEHHHHHHhCcc----cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEE
Confidence 12456666543321 11122346799999999999999999999999999988766554443 4788999999
Q ss_pred CCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCC--------------------
Q 004825 404 TNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTN-------------------- 463 (728)
Q Consensus 404 ~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~-------------------- 463 (728)
+|++|.++....+.+|+.|+++++.. .++..+++.|+++++|+++++|++++.|.+..
T Consensus 273 lPl~H~~~~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~ 350 (660)
T PLN02861 273 LPLAHVYDQVIETYCISKGASIGFWQ--GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYN 350 (660)
T ss_pred CcHHHHHHHHHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 99999998755556899999999874 36788999999999999999999999886410
Q ss_pred -----------------CCCCC-------CC-cCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCc
Q 004825 464 -----------------CIDGY-------DW-SSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSL 518 (728)
Q Consensus 464 -----------------~~~~~-------~l-~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~ 518 (728)
..... .+ +++|.+++||+++++++.+ +.+.++...++|.||+||+++.++....
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE~~~~~~~~~~ 429 (660)
T PLN02861 351 YKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTESCGGCFTSIA 429 (660)
T ss_pred HHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhhhhhceeeccc
Confidence 00000 01 4799999999999999754 5555554579999999999765443322
Q ss_pred ccccccccccCCCCCceEEEEc--CCC-CccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCc
Q 004825 519 LQAQSLAAFSTPAMGCKLFILG--NDG-CPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGD 595 (728)
Q Consensus 519 ~~~~~~~~iG~p~~~~~v~i~d--~~g-~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGD 595 (728)
......+++|+|++|++++|+| ++| ..++.+.. |||+|.++.+.. .|+++++.|++.|. +| ||+|||
T Consensus 430 ~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~--GEi~vrGp~v~~-GY~~~pe~T~~~f~-----dG--w~~TGD 499 (660)
T PLN02861 430 NVFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPR--GEICLRGNTLFS-GYHKRQDLTEEVLI-----DG--WFHTGD 499 (660)
T ss_pred ccCCCCCCccCccCceEEEEEEccccCcccCCCCCc--eeEEEcCCcccc-cccCCHHHHHhhhh-----cc--CcccCc
Confidence 2223457999999999999998 334 33344444 999996654433 25678888988884 24 999999
Q ss_pred eEEEecCceEEEEcccCCeeec-CceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCC-------C
Q 004825 596 VFERTSGGYYRAHGRADDTMNL-GGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSN-------Y 667 (728)
Q Consensus 596 l~~~~~dG~l~~~GR~d~~iki-~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~-------~ 667 (728)
+|++|+||+|+|+||+||+||+ +|++|+|.|||++|. .||.|.+|+|++.+ .+ +.++|+|++.... .
T Consensus 500 lg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~-~~p~V~~a~V~G~~---~~-~~~~A~vv~~~~~l~~~~~~~ 574 (660)
T PLN02861 500 IGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYS-RCPLIASIWVYGNS---FE-SFLVAVVVPDRQALEDWAANN 574 (660)
T ss_pred eEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHh-cCCCeeEEEEEecC---Cc-ceeEEEEEcCHHHHHHHHHHc
Confidence 9999999999999999999997 799999999999995 99999999999865 22 6899999976310 0
Q ss_pred -CCCCHH------HHHHHHHHHHHh-----hCCCCcccceEEECC-CC-----CCCCCCchhHHHHHHHHHh
Q 004825 668 -TPPDLN------QLRMSFNSAVQK-----KLNPLFKVSHVVPLP-SL-----PRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 668 -~~~~~~------~l~~~l~~~l~~-----~Lp~~~~P~~i~~v~-~l-----P~t~~GKvdR~~L~~~~~~ 721 (728)
...+.. ..+..+.+.+.+ .|+.+.++..+..++ .+ .+|+++|+.|+.+.+.|++
T Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~ 646 (660)
T PLN02861 575 NKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKD 646 (660)
T ss_pred CCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHH
Confidence 001111 233344444443 489999998888865 46 8999999999999988876
No 65
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.6e-64 Score=577.16 Aligned_cols=513 Identities=18% Similarity=0.175 Sum_probs=391.3
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
....|.++++++|+++|+++.+. ++||+||+++++++|++|.++|+++||+|+|+++|++++++++|||+++
T Consensus 16 ~~~~l~~~~~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~ 87 (579)
T PLN03102 16 PITFLKRASECYPNRTSIIYGKT--------RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMA 87 (579)
T ss_pred HHHHHHHHHHhCCCCeEEEECCc--------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 45668888889999999998776 9999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhc-------CCcEEEEcCCCCCcccccCCCCc
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQ-------APLAIVIPAKGSSFSMKLRDGDI 331 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~ 331 (728)
|++++|++|.++.+++.++|+.+++++||+++....... .+.... ...++.++...... .......
T Consensus 88 G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 160 (579)
T PLN03102 88 GAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAR-----EVLHLLSSEDSNLNLPVIFIHEIDFPK--RPSSEEL 160 (579)
T ss_pred CcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHH-----HHHhhccccccccCceEEEeccccccc--CCccccc
Confidence 999999999999999999999999999999765321100 111111 11233333211100 0011234
Q ss_pred CHHHHHHhhhccccCc-cccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhh
Q 004825 332 SWLDFLERVRKLKENE-FAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMM 410 (728)
Q Consensus 332 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 410 (728)
++.++........... .......++++++|+|||||||.||||+++|+++..........+.+...+++++..|++|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 240 (579)
T PLN03102 161 DYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCN 240 (579)
T ss_pred CHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhc
Confidence 5665554322100000 001124568999999999999999999999999755444444455677788999999999999
Q ss_pred hHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHH
Q 004825 411 GPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLW 490 (728)
Q Consensus 411 ~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~ 490 (728)
++...+.++..|+++++.+. .++..+++.|+++++|++.++|+++..|.+.........++++.+++||+++++.+.++
T Consensus 241 g~~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~ 319 (579)
T PLN03102 241 GWTFTWGTAARGGTSVCMRH-VTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKK 319 (579)
T ss_pred chhHHHHHHHhcCcEEeecc-CChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHH
Confidence 88777888999999998864 46678999999999999999999999998764433344567888999999999998888
Q ss_pred HHhccCCCCeEecccccccccccccCCccc-------------ccccccccCCCCCceEEEEcC-CCCccCCCCCceeEE
Q 004825 491 LMGRALYKPVIEYCGGTEIGGGFITGSLLQ-------------AQSLAAFSTPAMGCKLFILGN-DGCPIPQNVPGMGEL 556 (728)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~-------------~~~~~~iG~p~~~~~v~i~d~-~g~~vp~g~~giGEl 556 (728)
+.+ + +.++++.||+||+++.++...... ....+..+.|++ .+.+.|+ .++++|.+....|||
T Consensus 320 ~~~-~-g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl 395 (579)
T PLN03102 320 VQR-L-GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEI 395 (579)
T ss_pred HHH-c-CCeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEE
Confidence 764 4 478999999999986433221100 001122233443 4556664 467777531114999
Q ss_pred EEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCC
Q 004825 557 ALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDS 636 (728)
Q Consensus 557 ~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p 636 (728)
+|++..+.. .|+++++.+++.|.. | ||+|||+|++++||+++++||.||+||++|++|+|.|||++|. .||
T Consensus 396 ~v~g~~~~~-GY~~~~~~t~~~f~~-----g--w~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~p 466 (579)
T PLN03102 396 VIKGSSIMK-GYLKNPKATSEAFKH-----G--WLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLY-KYP 466 (579)
T ss_pred EEECcchhh-hhcCChhhhHhhhcc-----C--ceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHH-hCC
Confidence 997655433 245677778777742 3 9999999999999999999999999999999999999999996 899
Q ss_pred CeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHH------HHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCch
Q 004825 637 NVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQ------LRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKV 710 (728)
Q Consensus 637 ~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~------l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKv 710 (728)
.|.+++|++++++..+ +.++++|++.+ +. ..+... -...+++.++++||+|++|..++++++||+|++||+
T Consensus 467 ~V~~a~vv~~~~~~~~-~~~~a~v~~~~-~~-~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi 543 (579)
T PLN03102 467 KVLETAVVAMPHPTWG-ETPCAFVVLEK-GE-TTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKI 543 (579)
T ss_pred CcceeEEEeccCcccc-ceeEEEEEecC-cc-cccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccc
Confidence 9999999999998777 89999999876 43 121110 134567789999999999999999999999999999
Q ss_pred hHHHHHHHHHhhc
Q 004825 711 MRRVLRKQLAQLD 723 (728)
Q Consensus 711 dR~~L~~~~~~~~ 723 (728)
+|++|+++++++.
T Consensus 544 ~r~~L~~~~~~~~ 556 (579)
T PLN03102 544 LKPKLRDIAKGLV 556 (579)
T ss_pred cHHHHHHHHHHhh
Confidence 9999999987743
No 66
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6.3e-65 Score=584.77 Aligned_cols=504 Identities=19% Similarity=0.191 Sum_probs=386.0
Q ss_pred hhhhcccccCCCCCCeEEEEeccCC-CCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGD-GGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~-~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
...+++++++++|+++|+++.+..+ ..+.++.+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||++
T Consensus 36 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA~~~ 114 (612)
T PRK12476 36 LISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFAAIK 114 (612)
T ss_pred HHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHHHHH
Confidence 4456788888999999999854211 112345899999999999999999986 99999999999999999999999999
Q ss_pred cCcEEEec-CCCCC--HHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC----CcEEEEcCCCCCcccccCCCC
Q 004825 258 AGYIVVSI-ADSFA--SLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA----PLAIVIPAKGSSFSMKLRDGD 330 (728)
Q Consensus 258 aG~~~vpl-~p~~~--~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~ 330 (728)
+|++++|+ ++.++ .+++.+++++++++++|+++..... + ........ ..++.++...
T Consensus 115 aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~~~~----------- 178 (612)
T PRK12476 115 AGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEA---V--EGFLRNLPRLRRPRVIAIDAIP----------- 178 (612)
T ss_pred cCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH---H--HHHHhhcccccCceEEEecccc-----------
Confidence 99999999 68877 7899999999999999998653210 0 01111111 1122221100
Q ss_pred cCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcC-CCCCCEEEecCCcchh
Q 004825 331 ISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMD-IRKADIVAWPTNLGWM 409 (728)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~~~ 409 (728)
.. ...........+++++||+|||||||.||||+++|+++.+.+......++ +.+++++++++|++|+
T Consensus 179 -------~~----~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~ 247 (612)
T PRK12476 179 -------DS----AGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHD 247 (612)
T ss_pred -------cc----ccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccc
Confidence 00 00011122345789999999999999999999999999887776666677 7889999999999999
Q ss_pred hhHHHHHHHhhhCcEEEEeCCC-C--CcchHHHHHH--HhCCcEEEecHHHHHHHHcCCC----CCCCCCcCeeEEEeec
Q 004825 410 MGPWLVYASLLNGASIALYNGS-P--LGSGFAKFVQ--DAKVTMLGVVPSIVRTWKSTNC----IDGYDWSSIRCFGSTG 480 (728)
Q Consensus 410 ~~~~~~~~~L~~G~~lvl~~~~-~--~~~~l~~~i~--~~~vt~l~~~Ps~l~~l~~~~~----~~~~~l~~lr~i~~gG 480 (728)
.++..++.+++.|+++++..+. . ++..+++.++ ++++|++..+|+++..++.... ....+++++| +++||
T Consensus 248 ~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg 326 (612)
T PRK12476 248 MGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGS 326 (612)
T ss_pred cchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecc
Confidence 9997766777777777776532 2 6778999995 4899999999999887765321 1234678999 99999
Q ss_pred CCCCHHHHHHHHhccC-----CCCeEecccccccccccccCCcccc--------------------------cccccccC
Q 004825 481 EASNVDEYLWLMGRAL-----YKPVIEYCGGTEIGGGFITGSLLQA--------------------------QSLAAFST 529 (728)
Q Consensus 481 e~l~~~~~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~--------------------------~~~~~iG~ 529 (728)
+++++++.+++.+.++ ...++|.||+||++..++...+... ...+++|+
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~ 406 (612)
T PRK12476 327 EPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQ 406 (612)
T ss_pred cCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCC
Confidence 9999999998887652 2458999999998765433221100 01247899
Q ss_pred CCCCceEEEEcCC-CCccCCCCCceeEEEEeccccCCCccccCccccccccccCC------------CCCCceeEEeCce
Q 004825 530 PAMGCKLFILGND-GCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMP------------SRNGQILRRHGDV 596 (728)
Q Consensus 530 p~~~~~v~i~d~~-g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p------------~~~g~~~y~TGDl 596 (728)
|++|++++|+|++ |+++|.|+. |||+|.+..+.. .|+++++.|++.|...+ ..++.+||+|||+
T Consensus 407 ~~~g~~v~ivd~~~g~~~~~g~~--GEl~v~g~~v~~-GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDl 483 (612)
T PRK12476 407 VARSQWAVIVDPDTGAELPDGEV--GEIWLHGDNIGR-GYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDL 483 (612)
T ss_pred cCCCCEEEEEeCCCCcCCCCCCE--EEEEEcCCcccc-cccCChHHHHHHHhhhhccccccccccccccCCCCeeecccc
Confidence 9999999999988 999999986 999997665543 35667888888885311 0123469999999
Q ss_pred EEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeee--eEEEeecCCCCCceEEEEEEEecCCCCCCCCHHH
Q 004825 597 FERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLE--TAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQ 674 (728)
Q Consensus 597 ~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~--~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~ 674 (728)
|+++ ||+|+|+||+||+||++|+||+|.|||++|.+.||.|.+ ++|++.+++. + +.++++++..+ +....+.++
T Consensus 484 g~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~-~~~~~~v~~~~-~~~~~~~~~ 559 (612)
T PRK12476 484 GVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-N-ERLVIVAERAA-GTSRADPAP 559 (612)
T ss_pred ceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-c-ceEEEEEEecC-CcccccHHH
Confidence 9985 999999999999999999999999999999635899999 6667777765 5 78999999876 431346677
Q ss_pred HHHHHHHHHHhhCCCCcc-cceEEECC--CCCCCCCCchhHHHHHHHHHh
Q 004825 675 LRMSFNSAVQKKLNPLFK-VSHVVPLP--SLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 675 l~~~l~~~l~~~Lp~~~~-P~~i~~v~--~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+.+++++++..+ |++ |..+++++ +||+|++|||+|++|++++.+
T Consensus 560 l~~~~~~~l~~~---~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~ 606 (612)
T PRK12476 560 AIDAIRAAVSRR---HGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLD 606 (612)
T ss_pred HHHHHHHHHHHh---hCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHc
Confidence 777777666543 566 57777776 699999999999999999865
No 67
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.7e-64 Score=568.82 Aligned_cols=508 Identities=21% Similarity=0.195 Sum_probs=414.9
Q ss_pred hHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Q 004825 177 NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIV 256 (728)
Q Consensus 177 ~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~l 256 (728)
+...++|..+++++|+++|+++.+. .+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+
T Consensus 11 ~~l~~~l~~~a~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~ 82 (523)
T PRK08316 11 QTIGDILRRSARRYPDKTALVFGDR--------SWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACA 82 (523)
T ss_pred CCHHHHHHHHHHHCCCCeEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 4566778888899999999998876 99999999999999999999999999999999999999999999999
Q ss_pred HcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHH
Q 004825 257 LAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDF 336 (728)
Q Consensus 257 kaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 336 (728)
++|++++|+++..+.+++..+++.+++++++++....... ....+......+.+..... ..........+.++
T Consensus 83 ~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 155 (523)
T PRK08316 83 RAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTA-----EAALALLPVDTLILSLVLG--GREAPGGWLDFADW 155 (523)
T ss_pred hcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHH-----HHHhhhcCccceeeeeccc--ccccccchhhHHHH
Confidence 9999999999999999999999999999999987542110 0111111111111111000 00011122334433
Q ss_pred HHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHH-HH
Q 004825 337 LERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPW-LV 415 (728)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~ 415 (728)
..... ..........+++++++|||||||.||+|.++|++++..+......+++.++|+++...|+.|..++. .+
T Consensus 156 ~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~ 231 (523)
T PRK08316 156 AEAGS----VAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFL 231 (523)
T ss_pred HhcCC----CccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHH
Confidence 32211 11123445678999999999999999999999999998888777888999999999999999998874 46
Q ss_pred HHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhcc
Q 004825 416 YASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRA 495 (728)
Q Consensus 416 ~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~ 495 (728)
+.++..|+++++.+. .++..+++.|+++++|++.++|+++..+.+.......+++++|.+++||+.++.++.+.+.+.+
T Consensus 232 ~~~~~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~ 310 (523)
T PRK08316 232 GPYLYVGATNVILDA-PDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERL 310 (523)
T ss_pred HHHHhcCceEEEecC-CCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHc
Confidence 667899999999864 5678899999999999999999999999887655566788999999999999999999999888
Q ss_pred CCCCeEecccccccccccccCCcc-cccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccc
Q 004825 496 LYKPVIEYCGGTEIGGGFITGSLL-QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANH 574 (728)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~ 574 (728)
+++++++.||+||++.+.+..... .....+++|+|+++++++|+|++|++++.|+. |||++.+.....+ |+.+++.
T Consensus 311 ~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gei~v~~~~~~~~-y~~~~~~ 387 (523)
T PRK08316 311 PGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGEV--GEIVHRSPQLMLG-YWDDPEK 387 (523)
T ss_pred CCCceeeeecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCCCCCc--ceEEEECCchhhh-hcCCHHH
Confidence 788999999999998755443332 22345789999999999999999999999986 9999966654332 4556667
Q ss_pred cccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCce
Q 004825 575 YDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPE 654 (728)
Q Consensus 575 ~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~ 654 (728)
++..|.. +||+|||+|++++||.++++||.||+||++|.+|+|.+||+.|. .+|+|.+++|++.+++..+ +
T Consensus 388 ~~~~~~~-------~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~ 458 (523)
T PRK08316 388 TAEAFRG-------GWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALY-THPAVAEVAVIGLPDPKWI-E 458 (523)
T ss_pred HHHHhhC-------CCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHH-hCCChheEeEecccCcccC-C
Confidence 7766632 39999999999999999999999999999999999999999995 8999999999999888777 8
Q ss_pred EEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhh
Q 004825 655 QLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 722 (728)
.++++++.++ +. ..+.++ +.++++++|++|++|..+++++++|+|++||++|++|++++++.
T Consensus 459 ~~~~~v~~~~-~~-~~~~~~----l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~ 520 (523)
T PRK08316 459 AVTAVVVPKA-GA-TVTEDE----LIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGA 520 (523)
T ss_pred eEEEEEEECC-CC-CCCHHH----HHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhh
Confidence 8999999876 43 234444 45567888999999999999999999999999999999999864
No 68
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=7e-64 Score=567.80 Aligned_cols=501 Identities=18% Similarity=0.206 Sum_probs=402.8
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
+..++|+++++ |+++|+++.+. ++||+||.++++++|++|.+.|+++|++|+++++|++++++++|||++
T Consensus 26 ~~~~~~~~~a~--p~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~ 95 (536)
T PRK10946 26 PLTDILTRHAA--SDAIAVICGER--------QFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLK 95 (536)
T ss_pred cHHHHHHHhhC--CCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHH
Confidence 34566777776 99999998776 899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHh-hHhhcC-CcEEEEcCCCCCcccccCCCCcCHHH
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYR-VIDAQA-PLAIVIPAKGSSFSMKLRDGDISWLD 335 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~-~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~ 335 (728)
+|++++++++..+.+++..++++++++++++++...... .-.... +..... ...+++... .....+.+
T Consensus 96 ~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~---------~~~~~~~~ 165 (536)
T PRK10946 96 LGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFS-DDDFLNTLVAEHSSLRVVLLLND---------DGEHSLDD 165 (536)
T ss_pred cCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccc-hHHHHHHHHhhCCCceEEEEecC---------CCCccHHH
Confidence 999888777777888899999999999999986431100 000011 111111 122222211 11223444
Q ss_pred HHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHH--
Q 004825 336 FLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPW-- 413 (728)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-- 413 (728)
....... ........++++++++|||||||.||||+++|+++...+......++++++|++++..|++|.+++.
T Consensus 166 ~~~~~~~----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~ 241 (536)
T PRK10946 166 AINHPAE----DFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSP 241 (536)
T ss_pred HhhCccc----ccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhh
Confidence 3332211 1222345679999999999999999999999999999988888888999999999999999988763
Q ss_pred HHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCC--CCCCCCCcCeeEEEeecCCCCHHHHHHH
Q 004825 414 LVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTN--CIDGYDWSSIRCFGSTGEASNVDEYLWL 491 (728)
Q Consensus 414 ~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~--~~~~~~l~~lr~i~~gGe~l~~~~~~~~ 491 (728)
.++.+|..|+++++.+. .++..+++.++++++|++.++|+++..|++.. ......++++|.+++||+++++++.+++
T Consensus 242 ~~~~~l~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~ 320 (536)
T PRK10946 242 GALGVFLAGGTVVLAPD-PSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRI 320 (536)
T ss_pred hHHHHhhcCcEEEECCC-CCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHH
Confidence 57899999999988653 56778899999999999999999999997652 2233457899999999999999999988
Q ss_pred HhccCCCCeEecccccccccccccCCcccccccccccCCC-CCceEEEEcCCCCccCCCCCceeEEEEeccccCCCcccc
Q 004825 492 MGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPA-MGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLL 570 (728)
Q Consensus 492 ~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~ 570 (728)
.+.+ ++++++.||+||+++.++...........++|+|+ +++.++|+|++|++++.|+. |||++.+.....+ |++
T Consensus 321 ~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g~~~~~G-Y~~ 396 (536)
T PRK10946 321 PAEL-GCQLQQVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGEV--GRLMTRGPYTFRG-YYK 396 (536)
T ss_pred HHhc-CCeEEEeecccccceeeecCCCccccccccCCcccCCCceEEEECCCCCCCCCCCc--cEEEEecCccchh-hcC
Confidence 8766 48999999999976544322222223457899998 79999999999999999987 9999976655432 456
Q ss_pred CccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCC
Q 004825 571 NANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPD 650 (728)
Q Consensus 571 ~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~ 650 (728)
+++.+.+.|..+. ||+|||+|++++||+++++||.||+||++|++|+|.|||++|. .||+|.+++|++.+++.
T Consensus 397 ~~~~t~~~~~~d~------~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~ 469 (536)
T PRK10946 397 SPQHNASAFDANG------FYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLL-RHPAVIHAALVSMEDEL 469 (536)
T ss_pred CcccchhhcccCC------ceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHH-hCCCcceEEEEcCCCcc
Confidence 7778888886543 9999999999999999999999999999999999999999995 99999999999998877
Q ss_pred CCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhh-CCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhhc
Q 004825 651 GGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKK-LNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQLD 723 (728)
Q Consensus 651 ~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~-Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~ 723 (728)
.| +.+++++++++ + .+..++++ .+++. ||+|++|..+++++++|+|++||++|++|+++++++.
T Consensus 470 ~g-~~~~a~vv~~~-~---~~~~~l~~----~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 470 MG-EKSCAFLVVKE-P---LKAVQLRR----FLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred cC-ceEEEEEEeCC-C---CCHHHHHH----HHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhhc
Confidence 77 78999999876 2 45555555 56654 9999999999999999999999999999999988753
No 69
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-63 Score=560.25 Aligned_cols=480 Identities=21% Similarity=0.246 Sum_probs=389.3
Q ss_pred ccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEE
Q 004825 184 SVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVV 263 (728)
Q Consensus 184 ~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~v 263 (728)
+.+++.+||++|+.+...+ ..+||+||+++++++|++|++.|+++|++|+|+++|++++++++|||+++|++++
T Consensus 2 ~~~a~~~p~~~a~~~~~~~------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v 75 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALG------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYV 75 (488)
T ss_pred chhhhhCCCceEEEecCCC------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEE
Confidence 3466789999999873211 2899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhcc
Q 004825 264 SIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKL 343 (728)
Q Consensus 264 pl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (728)
|+++.++.+++.+++++++++++|+++...... .....++++.......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~ 124 (488)
T PRK09088 76 PLNWRLSASELDALLQDAEPRLLLGDDAVAAGR-------------------------------TDVEDLAAFIASADAL 124 (488)
T ss_pred eeCccCCHHHHHHHHHhCCCCEEEEcchhhccc-------------------------------ccccchhhhhhhcccc
Confidence 999999999999999999999999987432100 0011122222111100
Q ss_pred ccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHH-HHHHHhhhC
Q 004825 344 KENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPW-LVYASLLNG 422 (728)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~G 422 (728)
. ........++++++++|||||||.||+|+++|+++...+........+..+|++++..|++|.+++. .++.++..|
T Consensus 125 ~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g 202 (488)
T PRK09088 125 E--PADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVG 202 (488)
T ss_pred c--cccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcC
Confidence 0 1111234568899999999999999999999999988877776667788999999999999999984 577889999
Q ss_pred cEEEEeCCCCCcchHHHHHH--HhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCe
Q 004825 423 ASIALYNGSPLGSGFAKFVQ--DAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPV 500 (728)
Q Consensus 423 ~~lvl~~~~~~~~~l~~~i~--~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (728)
+++++.++ ..+..++..+. ++++|++..+|+++..+.+........++++|.+++||++++....+.+.+. ++++
T Consensus 203 ~~~~~~~~-~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v 279 (488)
T PRK09088 203 GSILVSNG-FEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPM 279 (488)
T ss_pred CEEEEcCC-CCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCce
Confidence 99988754 45677777775 4899999999999999987654445567899999999999999887777653 5889
Q ss_pred EecccccccccccccCCc--ccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccc
Q 004825 501 IEYCGGTEIGGGFITGSL--LQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVY 578 (728)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~--~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~ 578 (728)
++.||+||++..+..... ......+++|.|.++++++|+|+++++++.|++ |||+|.+..+.. .|+++++.+++.
T Consensus 280 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~-gY~~~~~~~~~~ 356 (488)
T PRK09088 280 VDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVP--GELLLRGPNLSP-GYWRRPQATARA 356 (488)
T ss_pred eeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCCCc--eEEEEECCccch-hhcCChhhhhhh
Confidence 999999999865432211 112345789999999999999999999999987 999997665433 245566667666
Q ss_pred cccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEE
Q 004825 579 FSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTI 658 (728)
Q Consensus 579 f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a 658 (728)
|..+ +||+|||+|++++||.++++||.||+||++|++|+|.|||++|. .+|.|.+++|++.+++..| +..++
T Consensus 357 ~~~~------g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~ 428 (488)
T PRK09088 357 FTGD------GWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLA-DHPGIRECAVVGMADAQWG-EVGYL 428 (488)
T ss_pred hcCC------CCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHH-hCCCcceEEEEeCCCccCC-ceeEE
Confidence 6432 39999999999999999999999999999999999999999995 8999999999999887666 77888
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhh
Q 004825 659 VVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 659 ~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 722 (728)
+++..+ +. ..+.. .+.+++++++++|++|..++++++||+|++||++|++|++++.+.
T Consensus 429 ~v~~~~-~~-~~~~~----~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 429 AIVPAD-GA-PLDLE----RIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred EEEECC-CC-CCCHH----HHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 888776 43 23433 455568888999999999999999999999999999999998764
No 70
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.4e-64 Score=574.50 Aligned_cols=519 Identities=16% Similarity=0.156 Sum_probs=406.5
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNA-LGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
..++|..++..+|+++|+++.+. .++.+||+||.++++++|++|++ .|+++||+|+++++|+++++++++||++
T Consensus 12 ~~~~l~~~a~~~~~~~a~~~~~~-----~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~ 86 (576)
T PRK05620 12 LTRILEYGSTVHGDTTVTTWGGA-----EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVAC 86 (576)
T ss_pred HHHHHHHHHHhCCCceEEEEcCC-----ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 34667788899999999988543 23589999999999999999997 7999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCC--cEEEEcCCCCCc---ccccCCCCcC
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAP--LAIVIPAKGSSF---SMKLRDGDIS 332 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~---~~~~~~~~~~ 332 (728)
+|++++|++|.++.+++.+++++++++++|+++.... .+ ......... .++++....... .........+
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~---~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 161 (576)
T PRK05620 87 MGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAE---QL--GEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYS 161 (576)
T ss_pred cCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHH---HH--HHHHhhCccccEEEEecCcccccchhcccccccccc
Confidence 9999999999999999999999999999999874321 00 022222211 122222111100 0000112345
Q ss_pred HHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHH--HHhcCCCCCCEEEecCCcchhh
Q 004825 333 WLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADA--WCHMDIRKADIVAWPTNLGWMM 410 (728)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~ 410 (728)
|.++..... .........++++++++|||||||.||||+++|+++....... ...+++..+|++++..|++|++
T Consensus 162 ~~~l~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 237 (576)
T PRK05620 162 YEALLDGRS----TVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVL 237 (576)
T ss_pred HHHHhhcCC----CcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhh
Confidence 677664321 1122234567999999999999999999999999986544332 2347788999999999999999
Q ss_pred hHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHH
Q 004825 411 GPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLW 490 (728)
Q Consensus 411 ~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~ 490 (728)
+...++.++..|+++++.....++..+++.|+++++|++..+|+++..++........+..++|.+++||+++++++.++
T Consensus 238 g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~ 317 (576)
T PRK05620 238 SWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKA 317 (576)
T ss_pred hhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHH
Confidence 99888899999999999876667889999999999999999999999887653333334568999999999999999998
Q ss_pred HHhccCCCCeEecccccccccccccCCccc-------ccccccccCCCCCceEEEEcCCCCccC--CCCCceeEEEEecc
Q 004825 491 LMGRALYKPVIEYCGGTEIGGGFITGSLLQ-------AQSLAAFSTPAMGCKLFILGNDGCPIP--QNVPGMGELALSPL 561 (728)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~-------~~~~~~iG~p~~~~~v~i~d~~g~~vp--~g~~giGEl~v~~~ 561 (728)
+.+.++ +++++.||+||++...+...+.. .....++|++.++++++|+|+ |++++ .|.. |||++.+.
T Consensus 318 ~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-g~~~~~~~~~~--Gel~v~g~ 393 (576)
T PRK05620 318 WEERYG-VDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-GQVMESTDRNE--GEIQVRGN 393 (576)
T ss_pred HHHHhC-CceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC-CccccCCCCCc--eEEEEEcC
Confidence 887764 78999999999986544332211 012347899999999999998 77775 3444 99999776
Q ss_pred ccCCCccccCcccc----ccccccCCCC------CCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHH
Q 004825 562 IFGASSTLLNANHY----DVYFSGMPSR------NGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERIC 631 (728)
Q Consensus 562 ~~~~~~~~~~~~~~----~~~f~~~p~~------~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l 631 (728)
.+..+ |+++++.+ ...|..+++. ...+||+|||+|++++||.++++||.||+||++|++|++.|||++|
T Consensus 394 ~~~~g-Y~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l 472 (576)
T PRK05620 394 WVTAS-YYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYI 472 (576)
T ss_pred ccccc-ccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHH
Confidence 55432 45566666 6666654421 1235999999999999999999999999999999999999999999
Q ss_pred hcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchh
Q 004825 632 NAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVM 711 (728)
Q Consensus 632 ~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvd 711 (728)
. .||.|.+|+|++.+++..| +.++++++..+ +. ..+ ....+.|+++++++||+|++|..|+++++||+|++||++
T Consensus 473 ~-~~p~v~~~~vv~~~~~~~g-~~~~a~v~~~~-~~-~~~-~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~ 547 (576)
T PRK05620 473 M-AAPEVVECAVIGYPDDKWG-ERPLAVTVLAP-GI-EPT-RETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFD 547 (576)
T ss_pred h-cCCCceEEEEEeccCCCcC-ceeEEEEEecC-CC-Ccc-cccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCc
Confidence 6 8999999999999988777 78888888776 43 111 122356666899999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 004825 712 RRVLRKQLAQ 721 (728)
Q Consensus 712 R~~L~~~~~~ 721 (728)
|++|++++++
T Consensus 548 r~~L~~~~~~ 557 (576)
T PRK05620 548 KKDLRQHLAD 557 (576)
T ss_pred HHHHHHHHhc
Confidence 9999999985
No 71
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.3e-64 Score=569.85 Aligned_cols=508 Identities=19% Similarity=0.197 Sum_probs=410.2
Q ss_pred cchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Q 004825 175 FVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLA 254 (728)
Q Consensus 175 ~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA 254 (728)
+.|..+. +.++++++|+++|+.+.+. .+||.||.++++++|++|.+.|+++|++|+|+++++++++++++|
T Consensus 16 ~~n~~~~-~~~~a~~~~~~~a~~~~~~--------~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a 86 (542)
T PRK07786 16 RQNWVNQ-LARHALMQPDAPALRFLGN--------TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLA 86 (542)
T ss_pred ccCHHHH-HHHHHHHCCCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 3455444 6667888999999998877 899999999999999999999999999999999999999999999
Q ss_pred HHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC--CcEEEEcCCCCCcccccCCCCcC
Q 004825 255 IVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA--PLAIVIPAKGSSFSMKLRDGDIS 332 (728)
Q Consensus 255 ~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~ 332 (728)
|+++|++++|+++..+.+++..+++++++++++++....... . ......+ ...+++... . ..+...
T Consensus 87 ~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~-~------~~~~~~ 154 (542)
T PRK07786 87 ANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVA---T--AVRDIVPLLSTVVVAGGS-S------DDSVLG 154 (542)
T ss_pred HHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHH---H--HhhhccCccceEEEecCC-C------cccccC
Confidence 999999999999999999999999999999999987532100 0 0101111 122222110 0 112345
Q ss_pred HHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCC-CCCCEEEecCCcchhhh
Q 004825 333 WLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDI-RKADIVAWPTNLGWMMG 411 (728)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~-~~~d~~l~~~~~~~~~~ 411 (728)
+.++...... .........+++++++|||||||.||||+++|+++...+......+++ ..++++++..|+.|.++
T Consensus 155 ~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 230 (542)
T PRK07786 155 YEDLLAEAGP----AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAG 230 (542)
T ss_pred HHHHhhccCC----CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHH
Confidence 5555443221 112234566889999999999999999999999999888777777777 67889999999999999
Q ss_pred HHHHHHHhhhCcEEEEeC-CCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHH
Q 004825 412 PWLVYASLLNGASIALYN-GSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLW 490 (728)
Q Consensus 412 ~~~~~~~L~~G~~lvl~~-~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~ 490 (728)
+..++.++..|+++++.+ ...++..+++.|+++++|+++++|+++..|+......... .++|.+++||++++++++++
T Consensus 231 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~ 309 (542)
T PRK07786 231 IGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQ 309 (542)
T ss_pred HHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHH
Confidence 988999999999999975 2347788999999999999999999999998765433322 36999999999999999999
Q ss_pred HHhccCCCCeEecccccccccccccCCcc-cccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccc
Q 004825 491 LMGRALYKPVIEYCGGTEIGGGFITGSLL-QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTL 569 (728)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~ 569 (728)
+.+.+++.++++.||+||++...+..... ......++|+|++|+.++|+|+++++++.|+. |||++.+..+..+ |+
T Consensus 310 ~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~g-y~ 386 (542)
T PRK07786 310 MAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGEV--GEIVYRAPTLMSG-YW 386 (542)
T ss_pred HHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCCc--eEEEEEChhhhhh-hc
Confidence 99988889999999999998654332221 11345689999999999999999999999986 9999966544332 45
Q ss_pred cCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCC
Q 004825 570 LNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPP 649 (728)
Q Consensus 570 ~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~ 649 (728)
++++.+...|.. | ||+|||++++++||.++++||.||+||++|++|++.|||++|. .||.|.+++|++.+++
T Consensus 387 ~~~~~~~~~f~~-----~--~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~ 458 (542)
T PRK07786 387 NNPEATAEAFAG-----G--WFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLA-SHPDIVEVAVIGRADE 458 (542)
T ss_pred CCHHHHHHHhhC-----C--cccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHH-hCCCccEEEEEeccCc
Confidence 667777777742 3 9999999999999999999999999999999999999999995 8999999999998877
Q ss_pred CCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhhccc
Q 004825 650 DGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQLDQN 725 (728)
Q Consensus 650 ~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~~ 725 (728)
..+ +.++++++... +...... +.+.+.+++++++|++|..++++++||+|++||++|++|++++.+...+
T Consensus 459 ~~~-~~~~~~v~~~~-~~~~~~~----~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~~ 528 (542)
T PRK07786 459 KWG-EVPVAVAAVRN-DDAALTL----EDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGACVNV 528 (542)
T ss_pred ccC-ceEEEEEEECC-CCCCCCH----HHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhhhch
Confidence 666 78888888765 3212333 3455578889999999999999999999999999999999999885543
No 72
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-63 Score=569.49 Aligned_cols=505 Identities=18% Similarity=0.206 Sum_probs=397.7
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNAL-GLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
..+.|.++++++|+++|+++.+. ++||.||.++++++|++|.+. |+++||+|+|+++|++++++++|||++
T Consensus 26 ~~~~l~~~~~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~ 97 (562)
T PRK12492 26 VVEVFERSCKKFADRPAFSNLGV--------TLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALR 97 (562)
T ss_pred HHHHHHHHHHhCCCCeeEecCCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 45667888899999999987665 899999999999999999985 999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcC-------------CC--CC-
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPA-------------KG--SS- 321 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-------------~~--~~- 321 (728)
+|++++|++|.++.+++.+++++++++++++++....... .+............. .. ..
T Consensus 98 ~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (562)
T PRK12492 98 AGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQ-----EVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKV 172 (562)
T ss_pred cCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHH-----HhhhccCceEEEeechhhccccccchhcccccccc
Confidence 9999999999999999999999999999999764321110 000000000000000 00 00
Q ss_pred ---cccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcC-----
Q 004825 322 ---FSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMD----- 393 (728)
Q Consensus 322 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~----- 393 (728)
...........|.++...... ....+.....+++++|+|||||||.||||+++|+++...+......+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~ 249 (562)
T PRK12492 173 KKMVPAYHLPQAVPFKQALRQGRG---LSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPD 249 (562)
T ss_pred cccccccCCcccccHHHHHhccCC---CCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccccc
Confidence 000001122445555433211 111223456789999999999999999999999999877665544332
Q ss_pred ----CCC-CCEEEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCC
Q 004825 394 ----IRK-ADIVAWPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDG 467 (728)
Q Consensus 394 ----~~~-~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~ 467 (728)
+.. +++++...|++|.++. +.++..+..|+++++.....++..+++.|+++++|++..+|+++..|++......
T Consensus 250 ~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~ 329 (562)
T PRK12492 250 GQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKD 329 (562)
T ss_pred ccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCccc
Confidence 233 3567888999999987 4567778899988877654567789999999999999999999999988765555
Q ss_pred CCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccC
Q 004825 468 YDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIP 547 (728)
Q Consensus 468 ~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp 547 (728)
.+++++|.+++||+++++++.+++.+.+ ++++++.||+||++..++..........+++|+|+++++++|+|+++++++
T Consensus 330 ~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd~~~~~~~ 408 (562)
T PRK12492 330 LDFSALKLTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPYGELARLGTVGIPVPGTALKVIDDDGNELP 408 (562)
T ss_pred ccccceeEEEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCCcccccCCccceecCCCEEEEECCCCCCCC
Confidence 6788999999999999999998887765 589999999999987654433322334568999999999999999999999
Q ss_pred CCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHH
Q 004825 548 QNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEI 627 (728)
Q Consensus 548 ~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eI 627 (728)
.|+. |||+|++..+.. .|+++++.+.+.|.. ..||+|||+|+++++|.+++.||.|++||++|++|+|.||
T Consensus 409 ~g~~--Gel~v~g~~~~~-gY~~~~~~t~~~~~~------~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eI 479 (562)
T PRK12492 409 LGER--GELCIKGPQVMK-GYWQQPEATAEALDA------EGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEI 479 (562)
T ss_pred CCCc--eEEEEeCCcccc-ccccCchhhhhcccC------CCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHH
Confidence 9986 999996654433 246677777777753 2399999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCC
Q 004825 628 ERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTAT 707 (728)
Q Consensus 628 E~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~ 707 (728)
|++|. .||.|.+++|++.++...+ +.++++++..+ +. .+.+ .++++++++|+.|++|..++++++||+|++
T Consensus 480 E~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~-~~--~~~~----~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~ 550 (562)
T PRK12492 480 EDVVM-AHPKVANCAAIGVPDERSG-EAVKLFVVARD-PG--LSVE----ELKAYCKENFTGYKVPKHIVLRDSLPMTPV 550 (562)
T ss_pred HHHHH-hCCCeeEEEEEeccCCCCC-ceEEEEEEeCC-CC--CCHH----HHHHHHHHhcccccCCcEEEEeccCCCCCC
Confidence 99996 8999999999999887766 78888888755 22 3434 455568889999999999999999999999
Q ss_pred CchhHHHHHHH
Q 004825 708 NKVMRRVLRKQ 718 (728)
Q Consensus 708 GKvdR~~L~~~ 718 (728)
||++|++|+++
T Consensus 551 GK~~r~~L~~~ 561 (562)
T PRK12492 551 GKILRRELRDI 561 (562)
T ss_pred CceeHHHHHhh
Confidence 99999999875
No 73
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1e-63 Score=568.59 Aligned_cols=506 Identities=20% Similarity=0.224 Sum_probs=404.0
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..++|.++++++||++|+++.++ +++||+||+++++++|++|++.|+++||+|+++++|++++++++|||+++
T Consensus 25 l~~~~~~~~~~~pd~~a~~~~~~-------~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~ 97 (547)
T PRK06087 25 LADYWQQTARAMPDKIAVVDNHG-------ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKV 97 (547)
T ss_pred HHHHHHHHHHHCCCceEEEcCCC-------CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 44668888889999999997653 28999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCC--cEEEEcCCCCCcccccCCCCcCHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAP--LAIVIPAKGSSFSMKLRDGDISWLD 335 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~ 335 (728)
|++++|++|.++.+++.+++++++++++++++..... ...+.. ........ .++.+..... ......+.+
T Consensus 98 G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 170 (547)
T PRK06087 98 GAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQT-RPVDLILPLQNQLPQLQQIVGVDKLAP------ATSSLSLSQ 170 (547)
T ss_pred CcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccc-cHHHHHHHHHhhCCCCcEEEEeCCcCC------CcCccCHHH
Confidence 9999999999999999999999999999998643211 111111 12222211 2333322111 011234444
Q ss_pred HHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH-HH
Q 004825 336 FLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP-WL 414 (728)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~ 414 (728)
+...... ........++++++|+|||||||.||||+++|++++.........++++++|++++..|++|.+++ ..
T Consensus 171 ~~~~~~~----~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 246 (547)
T PRK06087 171 IIADYEP----LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHG 246 (547)
T ss_pred HhccCCc----ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHH
Confidence 4332211 112234567899999999999999999999999998887777777889999999999999999987 46
Q ss_pred HHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhc
Q 004825 415 VYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGR 494 (728)
Q Consensus 415 ~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~ 494 (728)
++.++..|+++++.+. .++..+++.|+++++|++..+|+++..++........+++++|.+++||+++++++.+.+.+.
T Consensus 247 ~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~ 325 (547)
T PRK06087 247 VTAPFLIGARSVLLDI-FTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR 325 (547)
T ss_pred HHHHHhcCCEEEecCC-CCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc
Confidence 8899999999999764 567889999999999999988777777766554455677899999999999999998877653
Q ss_pred cCCCCeEecccccccccccccCCccc-ccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCcc
Q 004825 495 ALYKPVIEYCGGTEIGGGFITGSLLQ-AQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNAN 573 (728)
Q Consensus 495 ~~~~~l~n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~ 573 (728)
++++++.||+||++.......... .....++|+|++|+.++|+|+++++++.|+. |||++.+..+.. .|+++++
T Consensus 326 --~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~-gy~~~~~ 400 (547)
T PRK06087 326 --GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGCE--GEEASRGPNVFM-GYLDEPE 400 (547)
T ss_pred --CCcEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCCCc--ceEEEecccccc-cccCCHH
Confidence 689999999999986544332211 1234578999999999999999999999986 999996665443 2455666
Q ss_pred ccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCc
Q 004825 574 HYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGP 653 (728)
Q Consensus 574 ~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~ 653 (728)
.+.+.|..+ | ||+|||+++++++|+++++||.||+||++|.+|+|.+||++|. .+|+|.+++|++.+++..|
T Consensus 401 ~~~~~~~~~----g--~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~-~~~~v~~~~v~~~~~~~~g- 472 (547)
T PRK06087 401 LTARALDEE----G--WYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILL-QHPKIHDACVVAMPDERLG- 472 (547)
T ss_pred HHHHHhCCC----C--CcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHH-hCCCeeEEEEEecCCCCcC-
Confidence 676666432 2 9999999999999999999999999999999999999999995 8999999999999887777
Q ss_pred eEEEEEEEecCCCCCCCCHHHHHHHHHHHH-HhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 654 EQLTIVVVFKDSNYTPPDLNQLRMSFNSAV-QKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l-~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
++++++++..+ ..+..+..++.+ ++ ++.++++++|..|.++++||+|.|||++|++|++++.+
T Consensus 473 ~~~~~~v~~~~-~~~~~~~~~~~~----~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~ 536 (547)
T PRK06087 473 ERSCAYVVLKA-PHHSLTLEEVVA----FFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMR 536 (547)
T ss_pred ceEEEEEEECC-CCCCCCHHHHHH----HHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHH
Confidence 89999999865 221344444444 44 35899999999999999999999999999999998876
No 74
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.9e-64 Score=565.07 Aligned_cols=490 Identities=20% Similarity=0.210 Sum_probs=382.6
Q ss_pred ccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEE
Q 004825 184 SVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVV 263 (728)
Q Consensus 184 ~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~v 263 (728)
..+++++|+++|+++.+.+ .++||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||+++|++++
T Consensus 4 ~~~a~~~p~~~a~~~~~~~------~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~ 77 (501)
T PRK13390 4 GTHAQIAPDRPAVIVAETG------EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYIT 77 (501)
T ss_pred chhhhhCCCCcEEEecCCC------eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEe
Confidence 3466789999999875321 3899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhcc
Q 004825 264 SIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKL 343 (728)
Q Consensus 264 pl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (728)
|+++.++.+++.+++++++++++++++.... ............+.+... ......+++......
T Consensus 78 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-- 141 (501)
T PRK13390 78 AINHHLTAPEADYIVGDSGARVLVASAALDG------LAAKVGADLPLRLSFGGE--------IDGFGSFEAALAGAG-- 141 (501)
T ss_pred ccccCCCHHHHHHHHHhcCCcEEEEcchhhh------HHHHhhhccceEEEecCc--------ccccccHHHHhcccC--
Confidence 9999999999999999999999999764311 000000000011111100 011112322211100
Q ss_pred ccCccccccCCCCCceEEEecCCCCCCCceEEe--cCcHHHHH----HHHHHHhcCCCCCCEEEecCCcchhhhHHHHHH
Q 004825 344 KENEFAAVEQPVEAFTNILFSSGTTGEPKAIPW--TNATPFKA----AADAWCHMDIRKADIVAWPTNLGWMMGPWLVYA 417 (728)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~--sh~~l~~~----~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (728)
+.....+++++|+|||||||.||||++ +|+++... .......+++..+|+++..+|++|+.++...+.
T Consensus 142 ------~~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~ 215 (501)
T PRK13390 142 ------PRLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSM 215 (501)
T ss_pred ------CCCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHH
Confidence 001122357999999999999999995 55655432 112234577889999999999999998855556
Q ss_pred HhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC--CCCCCCcCeeEEEeecCCCCHHHHHHHHhcc
Q 004825 418 SLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC--IDGYDWSSIRCFGSTGEASNVDEYLWLMGRA 495 (728)
Q Consensus 418 ~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~ 495 (728)
.+..|+++++.+. .++..+++.|+++++|++.++|+++..|+.... ....+++++|.+++||+++++++.+.+.+.+
T Consensus 216 ~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~ 294 (501)
T PRK13390 216 VHALGGTVVLAKR-FDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL 294 (501)
T ss_pred HHhcCceEEEcCC-cCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc
Confidence 6788999988764 567899999999999999999999999886532 1334578999999999999999988888765
Q ss_pred CCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCcccc
Q 004825 496 LYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHY 575 (728)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~ 575 (728)
+ .++++.||+||++.++...........+++|+|++| .++|+|++|++++.|+. |||+|.+..+.. .|+++++.+
T Consensus 295 ~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~-gy~~~~~~t 369 (501)
T PRK13390 295 G-PIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICDDDGNELPAGRI--GTVYFERDRLPF-RYLNDPEKT 369 (501)
T ss_pred C-CceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEECCCCCCCCCCCc--eEEEEecCCccc-cccCChhhh
Confidence 4 789999999999864433222222345689999999 69999999999999987 999996654433 345677777
Q ss_pred ccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceE
Q 004825 576 DVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQ 655 (728)
Q Consensus 576 ~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~ 655 (728)
++.|... +..||+|||+|++++||++++.||.|++||++|++|+|.|||++|. .||.|.+++|++++++..+ +.
T Consensus 370 ~~~~~~~----~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~-~~~~v~~~~v~~~~~~~~~-e~ 443 (501)
T PRK13390 370 AAAQHPA----HPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALT-MHPAVHDVAVIGVPDPEMG-EQ 443 (501)
T ss_pred HHhhccC----CCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHH-hCCCeeEEEEEeccCcccC-ce
Confidence 7766431 1239999999999999999999999999999999999999999995 8999999999999988777 88
Q ss_pred EEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHH
Q 004825 656 LTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLR 716 (728)
Q Consensus 656 l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 716 (728)
+++++++.. +. .. ..++.+.|++.++++||.||+|..++++++||+|++||++|++|+
T Consensus 444 ~~~~v~~~~-~~-~~-~~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 444 VKAVIQLVE-GI-RG-SDELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred eEEEEEecC-CC-Cc-chhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 999998876 43 12 234456777889999999999999999999999999999999984
No 75
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=8.2e-64 Score=564.04 Aligned_cols=492 Identities=16% Similarity=0.144 Sum_probs=408.3
Q ss_pred hhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Q 004825 181 NCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGY 260 (728)
Q Consensus 181 ~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~ 260 (728)
++|.++++.+|+++|+.+.+. .+||+||.++++++|.+|.+.|+++|++|+++++++.++++++|||+++|+
T Consensus 6 ~~l~~~a~~~p~~~~~~~~~~--------~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~ 77 (503)
T PRK04813 6 ETIEEFAQTQPDFPAYDYLGE--------KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGH 77 (503)
T ss_pred HHHHHHHHhCCCceEEEeCCc--------EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 567778889999999998776 999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhh
Q 004825 261 IVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERV 340 (728)
Q Consensus 261 ~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (728)
+++|+++.++.+++..+++.++++++++++....... .. ....+.++....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~----------------~~~~~~~~~~~~ 128 (503)
T PRK04813 78 AYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLEIL-------------GI----------------PVITLDELKDIF 128 (503)
T ss_pred EEecCCCCChHHHHHHHHHhcCCCEEEeccccccccc-------------CC----------------cEEehHHhhhhh
Confidence 9999999999999999999999999999875310000 00 011111211111
Q ss_pred hccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhh
Q 004825 341 RKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLL 420 (728)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~ 420 (728)
.. ...........++++++++|||||||.||||.++|+++...+.+....+++..+++++...|++|+.+++.++.+|.
T Consensus 129 ~~-~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~ 207 (503)
T PRK04813 129 AT-GNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLA 207 (503)
T ss_pred hc-cccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHh
Confidence 00 00011123456788999999999999999999999999998888888899999999999999999999988899999
Q ss_pred hCcEEEEeCCC--CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCC
Q 004825 421 NGASIALYNGS--PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYK 498 (728)
Q Consensus 421 ~G~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (728)
.|+++++++.. .++..+++.++++++|++..+|++++.++.........++++|.++++|+++++.+.+++.+.++++
T Consensus 208 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~ 287 (503)
T PRK04813 208 SGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSA 287 (503)
T ss_pred cCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCc
Confidence 99999998753 3567899999999999999999999887665444455678999999999999999999999988778
Q ss_pred CeEecccccccccccccCCc----ccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccc
Q 004825 499 PVIEYCGGTEIGGGFITGSL----LQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANH 574 (728)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~ 574 (728)
.+++.||+||++..++.... .......++|+|.++++++|+|++|.+++.|+. |||++.+.....+ |+++++.
T Consensus 288 ~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~g-y~~~~~~ 364 (503)
T PRK04813 288 TIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQ--GEIVISGPSVSKG-YLNNPEK 364 (503)
T ss_pred eEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCc--eEEEEeccccccc-cCCChhH
Confidence 99999999999764432211 112334579999999999999999999999986 9999966544332 4556667
Q ss_pred cccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCce
Q 004825 575 YDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPE 654 (728)
Q Consensus 575 ~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~ 654 (728)
+...|..+ .|.+||+|||+|++ .||++++.||.||+||++|++|+|.+||+++. .+|+|.+++|++.+++..+ +
T Consensus 365 ~~~~~~~~---~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~ 438 (503)
T PRK04813 365 TAEAFFTF---DGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLR-QSSYVESAVVVPYNKDHKV-Q 438 (503)
T ss_pred hHHhhccC---CCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHH-hCCCcceEEEEEeeCCCCc-c
Confidence 76666543 36679999999999 99999999999999999999999999999995 8999999999987766555 7
Q ss_pred EEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 655 QLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
.+++++++.+ +. .....++.+.++++++++|+.|++|..++++++||+|+|||++|++|++++++
T Consensus 439 ~~~~~v~~~~-~~-~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 503 (503)
T PRK04813 439 YLIAYVVPKE-ED-FEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVNK 503 (503)
T ss_pred EEEEEEEecc-cc-ccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhcC
Confidence 8999998776 32 22344677788889999999999999999999999999999999999998763
No 76
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-64 Score=601.23 Aligned_cols=502 Identities=15% Similarity=0.092 Sum_probs=377.3
Q ss_pred CCCCCCCCcc--hHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Q 004825 167 GGQWLPGAFV--NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPM 244 (728)
Q Consensus 167 ~~~w~~~~~~--~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~ 244 (728)
+..|+..... ....++|.++++++||++|+++.++ ++||+||+++++++|+.|++.|+++||+|+|+++|
T Consensus 435 ~~~~~~~~~~~~~sl~~ll~~~a~~~pd~~Al~~~~~--------~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n 506 (994)
T PRK07868 435 LARLGQINDHTRISLGRIIAEQARDAPKGEFLLFDGR--------VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMET 506 (994)
T ss_pred HHHhhhcCCCCCccHHHHHHHHHHHCCCCeEEEeCCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Confidence 3455444321 2345678889999999999999776 89999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCccc
Q 004825 245 NVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSM 324 (728)
Q Consensus 245 s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 324 (728)
++++++++|||+++|++++|++|. +++.++++++++++||++..... .+......+++++.... ...
T Consensus 507 ~~e~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~---------~~~~~~~~iiv~~~~~~-~~~ 573 (994)
T PRK07868 507 RPSALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLE---------AARQLPGRVLVLGGGES-RDL 573 (994)
T ss_pred CHHHHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHH---------HHHhcCceEEEecCCcc-ccc
Confidence 999999999999999999999985 68999999999999999864321 11112233344322110 000
Q ss_pred ccCC--CCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEe
Q 004825 325 KLRD--GDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAW 402 (728)
Q Consensus 325 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~ 402 (728)
.... ...++.+....... .+.........++++|||+|| ||||.||++.++|.+...........++++.+|++++
T Consensus 574 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~ 651 (994)
T PRK07868 574 DLPDDADVIDMEKIDPDAVE-LPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYC 651 (994)
T ss_pred cCCcchhhhhhhhcCccccc-CCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEE
Confidence 0000 00111111000000 000001112236899999999 5788888888888765544444556678899999999
Q ss_pred cCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCC
Q 004825 403 PTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEA 482 (728)
Q Consensus 403 ~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~ 482 (728)
.+|++|+++++..+.+++.|++.+++....++..+++.|++++||+++++|++++.|++.......++++||.++ |+.
T Consensus 652 ~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~g 729 (994)
T PRK07868 652 LTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSG 729 (994)
T ss_pred ecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCC
Confidence 999999999976655555555555555457888999999999999999999999999876444445677899876 344
Q ss_pred CCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCc-eEEE-----------EcCCC--CccCC
Q 004825 483 SNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGC-KLFI-----------LGNDG--CPIPQ 548 (728)
Q Consensus 483 l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~-~v~i-----------~d~~g--~~vp~ 548 (728)
+++++++++.+.++.++++|.||+||+++... .. .....+++|+|++|+ +++| +|++| +.++.
T Consensus 730 l~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~-~~--~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ 806 (994)
T PRK07868 730 MPTGLWERVVEAFAPAHVVEFFATTDGQAVLA-NV--SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEV 806 (994)
T ss_pred CCHHHHHHHHHHhCchheeeeeeccccccccc-cc--CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCC
Confidence 99999999998887789999999999875432 11 123457899999997 5655 35666 66888
Q ss_pred CCCceeEEEEeccccCCCccccCccc--cccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHH
Q 004825 549 NVPGMGELALSPLIFGASSTLLNANH--YDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVE 626 (728)
Q Consensus 549 g~~giGEl~v~~~~~~~~~~~~~~~~--~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~e 626 (728)
|++ |||++.+... .+++. ++.+|. ++++||+|||+|++|+||+|+|+||.|||||++|.+|+|+|
T Consensus 807 ge~--Gel~~~~~~~------~~p~~t~~~~~~~-----~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~E 873 (994)
T PRK07868 807 NEV--GVLLARARGP------IDPTASVKRGVFA-----PADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEP 873 (994)
T ss_pred CCc--eEEEEecCCC------CChhhhhHhcccc-----cCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHH
Confidence 887 9999965421 13332 233442 25679999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCC
Q 004825 627 IERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTA 706 (728)
Q Consensus 627 IE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~ 706 (728)
||++|. .||+|.+|+|++++++. + +.++|||++++ +. ..+.++|++ ++++ ||.||+|..|+++++||+|+
T Consensus 874 IE~~L~-~hp~V~~aaVvg~~d~~-~-~~~~a~Vv~~~-~~-~~~~~~L~~----~l~~-l~~y~vP~~i~~v~~lP~T~ 943 (994)
T PRK07868 874 VTDALG-RIGGVDLAVTYGVEVGG-R-QLAVAAVTLRP-GA-AITAADLTE----ALAS-LPVGLGPDIVHVVPEIPLSA 943 (994)
T ss_pred HHHHHh-cCCCeeEEEEEeecCCC-C-ceEEEEEEeCC-CC-cCCHHHHHH----HHHh-CCCCcCCeEEEEeCCCCCCc
Confidence 999995 99999999999998764 4 78999999876 54 456666555 4654 89999999999999999999
Q ss_pred CCchhHHHHHHHH
Q 004825 707 TNKVMRRVLRKQL 719 (728)
Q Consensus 707 ~GKvdR~~L~~~~ 719 (728)
|||++|++|++..
T Consensus 944 sGKi~r~~L~~~~ 956 (994)
T PRK07868 944 TYRPTVSALRAAG 956 (994)
T ss_pred cccEehHHHHhcC
Confidence 9999999997653
No 77
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=9.2e-64 Score=565.29 Aligned_cols=501 Identities=18% Similarity=0.184 Sum_probs=398.4
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
...+.|+++++++|+++|+++.+. .+.++.+||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||++
T Consensus 8 ~l~~~~~~~a~~~p~~~a~~~~~~---~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~ 84 (517)
T PRK08008 8 HLRQMWDDLADVYGHKTALIFESS---GGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAK 84 (517)
T ss_pred cHHHHHHHHHHHCCCceEEEcccC---CCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 456778889999999999998653 12345899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhc---CCcEEEEcCCCCCcccccCCCCcCH
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQ---APLAIVIPAKGSSFSMKLRDGDISW 333 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~ 333 (728)
+|++++|++|+++.+++.++++++++++++++.... +.. ++.+.. ...+++...... ......++
T Consensus 85 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 153 (517)
T PRK08008 85 IGAIMVPINARLLREESAWILQNSQASLLVTSAQFY------PMYRQIQQEDATPLRHICLTRVALP-----ADDGVSSF 153 (517)
T ss_pred cCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchh------HHHHHHHhhccccCcEEEEecCCCc-----ccccccCH
Confidence 999999999999999999999999999999987532 111 222211 112222221100 01122334
Q ss_pred HHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH-
Q 004825 334 LDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP- 412 (728)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~- 412 (728)
.+....... .........++++++|+|||||||.||||+++|+++............+..++++++..|+.|..+.
T Consensus 154 ~~~~~~~~~---~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 230 (517)
T PRK08008 154 TQLKAQQPA---TLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQC 230 (517)
T ss_pred HHHhccCCc---cccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHH
Confidence 443322111 1111234467899999999999999999999999998654433344567889999999999887665
Q ss_pred HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHH
Q 004825 413 WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLM 492 (728)
Q Consensus 413 ~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~ 492 (728)
..++.++..|+++++.+. .++..+++.|+++++|++.++|++++.++..........++++.+.+++ +++++...++.
T Consensus 231 ~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~ 308 (517)
T PRK08008 231 TAAMAAFSAGATFVLLEK-YSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFE 308 (517)
T ss_pred HHHHHHHhcCcEEEEccc-cCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHH
Confidence 668889999999999864 5778899999999999999999999998876443333456788887754 78888888777
Q ss_pred hccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEec----cccCCCcc
Q 004825 493 GRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSP----LIFGASST 568 (728)
Q Consensus 493 ~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~----~~~~~~~~ 568 (728)
+.+ ++++++.||+||++..++...........++|.|++|++++|+|++|++++.|+. |||++.+ ..+. .|
T Consensus 309 ~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~~~~--gy 383 (517)
T PRK08008 309 ERF-GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRDDHNRPLPAGEI--GEICIKGVPGKTIFK--EY 383 (517)
T ss_pred HHh-CCeEEeeccccccccccccCCccccccCCccccCCCCcEEEEECCCCCCCCCCCc--ceEEEeCCCCcchhh--hH
Confidence 766 4899999999999865554444334455789999999999999999999999986 9999964 2222 24
Q ss_pred ccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecC
Q 004825 569 LLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPP 648 (728)
Q Consensus 569 ~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~ 648 (728)
+++++.+++.|..+ | ||+|||+|++++||.++++||.||+||++|++|+|.|||+++. .||.|.+++|+++++
T Consensus 384 ~~~~~~~~~~~~~~----g--~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~-~~~~v~~~~v~g~~~ 456 (517)
T PRK08008 384 YLDPKATAKVLEAD----G--WLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIA-THPKIQDIVVVGIKD 456 (517)
T ss_pred hCChHHHhhcccCC----C--CeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHH-hCCceeeEEEEccCC
Confidence 56777788888643 3 9999999999999999999999999999999999999999995 999999999999988
Q ss_pred CCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHH
Q 004825 649 PDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLR 716 (728)
Q Consensus 649 ~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 716 (728)
+..+ +.++++++++. +. ..+..+ ++++++++|++|++|..++++++||+|++||++|+.|+
T Consensus 457 ~~~~-~~~~~~v~~~~-~~-~~~~~~----l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 457 SIRD-EAIKAFVVLNE-GE-TLSEEE----FFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred CCCC-ceEEEEEEECC-CC-CCCHHH----HHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 8766 78999999886 43 344444 44567888999999999999999999999999999874
No 78
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-63 Score=563.64 Aligned_cols=513 Identities=17% Similarity=0.199 Sum_probs=400.6
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
.+.++|+++++++||++|++.... +..+++||+||.++++++|++|++.|+++||+|+++++|++++++++|||++
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~ 86 (542)
T PRK06018 11 LCHRIIDHAARIHGNREVVTRSVE----GPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMG 86 (542)
T ss_pred CHHHHHHHHHHhCCCceEEEeecc----CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHh
Confidence 455778888999999999985322 1235899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC--CcEEEEcCCCCCcccccCCCCcCHHH
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA--PLAIVIPAKGSSFSMKLRDGDISWLD 335 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~ 335 (728)
+|++++|++|.++.+++..+++++++++++++........ .+..... ...+++..... .......+...+.+
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 160 (542)
T PRK06018 87 IGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILE-----KIADKLPSVERYVVLTDAAH-MPQTTLKNAVAYEE 160 (542)
T ss_pred cCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHH-----HHHhhCCCccEEEEeccccc-ccccCccccccHHH
Confidence 9999999999999999999999999999999875421100 1111111 12222222111 00001112334555
Q ss_pred HHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHH-H-HHHHHHHhcCCCCCCEEEecCCcchhhhHH
Q 004825 336 FLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPF-K-AAADAWCHMDIRKADIVAWPTNLGWMMGPW 413 (728)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~-~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 413 (728)
+...... ........++++++|+|||||||.||||+++|++.+ . ........++++.+|+++...|++|+.+..
T Consensus 161 ~~~~~~~----~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~ 236 (542)
T PRK06018 161 WIAEADG----DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWG 236 (542)
T ss_pred HhccCCc----ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhH
Confidence 5443211 112234566889999999999999999999999743 2 223334567889999999999999998887
Q ss_pred HHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHh
Q 004825 414 LVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMG 493 (728)
Q Consensus 414 ~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~ 493 (728)
..+.++..|+++++.....++..+++.++++++|++.++|+++..|.+.......+++++|.+++|||++++++.+++.+
T Consensus 237 ~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~ 316 (542)
T PRK06018 237 IAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED 316 (542)
T ss_pred HHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH
Confidence 67788999999998765567788999999999999999999999998766555566789999999999999999999887
Q ss_pred ccCCCCeEecccccccccccccCCcccc----------cccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEecccc
Q 004825 494 RALYKPVIEYCGGTEIGGGFITGSLLQA----------QSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIF 563 (728)
Q Consensus 494 ~~~~~~l~n~YG~TE~~~~~~~~~~~~~----------~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~ 563 (728)
+ ++++++.||+||++.+.+.+..... ....++|+|.+|++++|+|++++++|.+....|||++.+..+
T Consensus 317 -~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~~~~~~~~~~Gel~i~g~~~ 394 (542)
T PRK06018 317 -M-GVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGKELPWDGKTFGRLKVRGPAV 394 (542)
T ss_pred -h-CCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCCCCCCCCCceeEEEEecCCc
Confidence 5 5899999999999865543321110 113578999999999999999999987532359999966554
Q ss_pred CCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEE
Q 004825 564 GASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAA 643 (728)
Q Consensus 564 ~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~V 643 (728)
.. +|++. +...+. ..+||+|||++++++||+++++||.||+||++|++|++.|||.++. .||+|.+|+|
T Consensus 395 ~~--gy~~~--~~~~~~------~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v 463 (542)
T PRK06018 395 AA--AYYRV--DGEILD------DDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAV-GHPKVAEAAV 463 (542)
T ss_pred ch--hhhcC--cccEec------CCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHH-hCCcceeEEE
Confidence 33 23332 122221 2349999999999999999999999999999999999999999995 8999999999
Q ss_pred EeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhhc
Q 004825 644 IGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQLD 723 (728)
Q Consensus 644 v~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~ 723 (728)
++.+++..+ +.+.+++++.+ +. ..+.++ +++.++++++.|++|..++++++||+|++||++|++|++++.+.+
T Consensus 464 ~~~~~~~~~-~~~~~~v~~~~-~~-~~~~~~----l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~~~ 536 (542)
T PRK06018 464 IGVYHPKWD-ERPLLIVQLKP-GE-TATREE----ILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKDYK 536 (542)
T ss_pred EeccCCCcC-ceeEEEEEeCC-CC-CCCHHH----HHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhccC
Confidence 999887766 78888888876 44 344444 444677889999999999999999999999999999999998754
Q ss_pred c
Q 004825 724 Q 724 (728)
Q Consensus 724 ~ 724 (728)
.
T Consensus 537 ~ 537 (542)
T PRK06018 537 L 537 (542)
T ss_pred C
Confidence 3
No 79
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-63 Score=563.08 Aligned_cols=487 Identities=20% Similarity=0.181 Sum_probs=381.2
Q ss_pred hhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 180 KNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGL-DKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 180 ~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv-~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..+|.+++ .|+++|+++.+. ++||+||.++++++|..|.+.|+ ++||+|+|+++|++++++++|||+++
T Consensus 6 ~~~l~~~~--~p~~~Al~~~~~--------~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~ 75 (540)
T PRK13388 6 AQLLRDRA--GDDTIAVRYGDR--------TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALG 75 (540)
T ss_pred HHHHHhhc--cCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhC
Confidence 34454443 799999998766 99999999999999999999999 89999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLE 338 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 338 (728)
|++++|++|.++.+++..++++++++++|+++....... .. .......+.+. ...+.+++.
T Consensus 76 Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~-----~~-~~~~~~~i~~~-------------~~~~~~~~~ 136 (540)
T PRK13388 76 GYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLD-----GL-DLPGVRVLDVD-------------TPAYAELVA 136 (540)
T ss_pred CCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHH-----hh-cccCceEEEcc-------------chhhhhhhc
Confidence 999999999999999999999999999999875421100 00 00011122211 111223322
Q ss_pred hhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHH-HHH
Q 004825 339 RVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWL-VYA 417 (728)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~ 417 (728)
.... ..+.....++++++|+|||||||.||||+++|+++...+......++++.+|+++..+|+.|..++.. ++.
T Consensus 137 ~~~~----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~ 212 (540)
T PRK13388 137 AAGA----LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAP 212 (540)
T ss_pred cccC----cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHH
Confidence 1110 11122356799999999999999999999999999988888788899999999999999999998854 556
Q ss_pred HhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCC
Q 004825 418 SLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALY 497 (728)
Q Consensus 418 ~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~ 497 (728)
+|..|+++++.+. .++..+++.|+++++|++..+|+.+..++..........++++.+ + |+.+++....++.+.+ +
T Consensus 213 ~l~~G~~~v~~~~-~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~-~ 288 (540)
T PRK13388 213 AVASGAAVALPAK-FSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRF-G 288 (540)
T ss_pred HHHcCcEEEECCC-CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHh-C
Confidence 8999999988654 567889999999999999999999999887543222223456643 3 5566777777777776 4
Q ss_pred CCeEecccccccccccccCCcccccccccccCCCCCceEE-----------EEcCCCCccC-CCCCceeEEEEe-ccccC
Q 004825 498 KPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLF-----------ILGNDGCPIP-QNVPGMGELALS-PLIFG 564 (728)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~-----------i~d~~g~~vp-~g~~giGEl~v~-~~~~~ 564 (728)
++++|.||+||++.+++... .....++|+|++|++++ ++|++|++++ .|. +|||++. +..+.
T Consensus 289 ~~l~~~YG~tE~~~~~~~~~---~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~~~~~--~GEl~v~~g~~~~ 363 (540)
T PRK13388 289 CQVEDGYGSSEGAVIVVREP---GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLNADEA--IGELVNTAGAGFF 363 (540)
T ss_pred CceecccccccccceeecCC---CCCCCCCCCCCCCcEEEcCCCCccccceeccCccccccCCCc--ceEEEEecCCccc
Confidence 88999999999986554321 12456899999997753 5566676664 343 4999996 54443
Q ss_pred CCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEE
Q 004825 565 ASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAI 644 (728)
Q Consensus 565 ~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv 644 (728)
. .|+++++.+++.|.. | ||+|||+|++++||+++++||+||+||++|++|+|.|||++|. .||+|.+|+|+
T Consensus 364 ~-gY~~~~~~t~~~~~~-----g--~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~ 434 (540)
T PRK13388 364 E-GYYNNPEATAERMRH-----G--MYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILL-RHPAINRVAVY 434 (540)
T ss_pred c-cccCChHHHHHHhhc-----C--ceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHH-hCCCceEEEEE
Confidence 2 245667777777632 3 9999999999999999999999999999999999999999995 89999999999
Q ss_pred eecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhh
Q 004825 645 GVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 645 ~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 722 (728)
+.+++..| +.+++++++.+ +. ..+.++++++++. +..|++|++|..++++++||+|++||++|++|+++...+
T Consensus 435 g~~~~~~g-~~~~~~v~~~~-~~-~~~~~~l~~~l~~--~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 435 AVPDERVG-DQVMAALVLRD-GA-TFDPDAFAAFLAA--QPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred EccCCCCC-ceeEEEEEECC-CC-cCCHHHHHHHHHh--hccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCC
Confidence 99887777 77888888876 44 3556666665432 235999999999999999999999999999999987654
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=6.7e-64 Score=619.03 Aligned_cols=513 Identities=16% Similarity=0.163 Sum_probs=405.8
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..+.+.++++++|+++|+++..+ +++||+||.++++++|++|++ ++++||+|+++++|++++++++|||+++
T Consensus 617 l~~~~~~~a~~~p~~~a~~~~~~-------~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~ 688 (1146)
T PRK08633 617 LAEAWIDTAKRNWSRLAVADSTG-------GELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLA 688 (1146)
T ss_pred HHHHHHHHHHhcCCCcEEEcCCC-------CcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHc
Confidence 44557778889999999987532 289999999999999999987 5899999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLE 338 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 338 (728)
|++++|++|.++.+++.+++++++++++++++............... .....++.+...... ......+.+...
T Consensus 689 G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 762 (1146)
T PRK08633 689 GKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLEL-PENVKVIYLEDLKAK-----ISKVDKLTALLA 762 (1146)
T ss_pred CCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhc-ccCceEEEeehhccc-----cchhHHHHHHHH
Confidence 99999999999999999999999999999987543211100000000 001112221110000 000011111111
Q ss_pred hhhcccc--CccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHH-HH
Q 004825 339 RVRKLKE--NEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPW-LV 415 (728)
Q Consensus 339 ~~~~~~~--~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~ 415 (728)
....... .........++++++|+|||||||.||||+++|+++.+.+.+....++++++|++++..|+.|..++. .+
T Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~ 842 (1146)
T PRK08633 763 ARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLTVTL 842 (1146)
T ss_pred hccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHH
Confidence 1000000 00001345679999999999999999999999999999988888888999999999999999999985 48
Q ss_pred HHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhcc
Q 004825 416 YASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRA 495 (728)
Q Consensus 416 ~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~ 495 (728)
+.+++.|+++++.+...++..+++.++++++|++.++|++++.+.+.......+++++|.+++|||++++++.+++.+.+
T Consensus 843 ~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~ 922 (1146)
T PRK08633 843 WLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF 922 (1146)
T ss_pred HHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh
Confidence 89999999999987666788999999999999999999999999886555566789999999999999999999998877
Q ss_pred CCCCeEecccccccccccccCCccc---------ccccccccCCCCCceEEEEcC-CCCccCCCCCceeEEEEeccccCC
Q 004825 496 LYKPVIEYCGGTEIGGGFITGSLLQ---------AQSLAAFSTPAMGCKLFILGN-DGCPIPQNVPGMGELALSPLIFGA 565 (728)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~---------~~~~~~iG~p~~~~~v~i~d~-~g~~vp~g~~giGEl~v~~~~~~~ 565 (728)
+ ++++|.||+||++..++...+.. .....++|+|++|++++|+|+ +++++|+|+. |||++++..+..
T Consensus 923 g-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~--Gel~v~g~~~~~ 999 (1146)
T PRK08633 923 G-IRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGED--GLILIGGPQVMK 999 (1146)
T ss_pred C-CCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCc--eEEEEcCCCccc
Confidence 4 89999999999986554332211 124578999999999999995 5899999987 999997665443
Q ss_pred CccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCC--CeeeeEE
Q 004825 566 SSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDS--NVLETAA 643 (728)
Q Consensus 566 ~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p--~V~~~~V 643 (728)
.|+++++.+++.|.+. +|.+||+|||+|++++||+++++||.||+||++|++|+|.|||++|. +|| .+.+++|
T Consensus 1000 -gY~~~~~~t~~~~~~~---~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~~~~~~~~v 1074 (1146)
T PRK08633 1000 -GYLGDPEKTAEVIKDI---DGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELA-KALGGEEVVFAV 1074 (1146)
T ss_pred -cccCCccchHHHhhcC---CCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHH-hccCCCCceEEE
Confidence 2466777888777643 35569999999999999999999999999999999999999999995 898 5678999
Q ss_pred EeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHH-hhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhh
Q 004825 644 IGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQ-KKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 644 v~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~-~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 722 (728)
++.+++..| +.++++++... .+.+++++ +++ +.+|.|++|..++++++||+|+|||+||++|+++.+++
T Consensus 1075 ~~~~~~~~g-~~~~~~v~~~~-----~~~~~l~~----~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1075 TAVPDEKKG-EKLVVLHTCGA-----EDVEELKR----AIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred EeccCCCCC-cEEEEEEecCc-----cCHHHHHH----HHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 999998887 88999888632 34555555 454 46999999999999999999999999999999998775
Q ss_pred c
Q 004825 723 D 723 (728)
Q Consensus 723 ~ 723 (728)
.
T Consensus 1145 ~ 1145 (1146)
T PRK08633 1145 L 1145 (1146)
T ss_pred c
Confidence 3
No 81
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.4e-63 Score=560.92 Aligned_cols=506 Identities=20% Similarity=0.205 Sum_probs=397.9
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..++|.++++++|+++|+.+.+. .+||.||.++++++|++|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 5 l~~~~~~~a~~~p~~~a~~~~~~--------~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~ 76 (533)
T PRK07798 5 IADLFEAVADAVPDRVALVCGDR--------RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKA 76 (533)
T ss_pred HHHHHHHHHHhCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhc
Confidence 34678889999999999999776 9999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCC--cEEEEcCCCCCcccccCCCCcCHHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAP--LAIVIPAKGSSFSMKLRDGDISWLDF 336 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~ 336 (728)
|++++|+++.++.+++.++++++++++++++....... .++...... .++.+..... .....+...+.++
T Consensus 77 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 148 (533)
T PRK07798 77 RAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRV-----AEVLPRLPKLRTLVVVEDGSG---NDLLPGAVDYEDA 148 (533)
T ss_pred CeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHH-----HHHhccCCCccEEEEecCCcc---cccCCccccHHHH
Confidence 99999999999999999999999999999987432110 011111111 1222222111 0111134466666
Q ss_pred HHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHh---------cCC------CCCCEEE
Q 004825 337 LERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCH---------MDI------RKADIVA 401 (728)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~---------~~~------~~~d~~l 401 (728)
...... ...... ..++.++|+|||||||.||||+++|+++...+...... ..+ ..+++++
T Consensus 149 ~~~~~~----~~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (533)
T PRK07798 149 LAAGSP----ERDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRF 223 (533)
T ss_pred HhccCC----cCCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEE
Confidence 543221 111112 23455799999999999999999999987654432211 112 5678999
Q ss_pred ecCCcchhhhHHHHHHHhhhCcEEEEeCC-CCCcchHHHHHHHhCCcEEEecHHHHHH-HHcCCC-CCCCCCcCeeEEEe
Q 004825 402 WPTNLGWMMGPWLVYASLLNGASIALYNG-SPLGSGFAKFVQDAKVTMLGVVPSIVRT-WKSTNC-IDGYDWSSIRCFGS 478 (728)
Q Consensus 402 ~~~~~~~~~~~~~~~~~L~~G~~lvl~~~-~~~~~~l~~~i~~~~vt~l~~~Ps~l~~-l~~~~~-~~~~~l~~lr~i~~ 478 (728)
...|+.|+.+++.++.+|+.|+++++.+. ..++..+++.|+++++|++.++|..+.. +..... ....+++++|.+++
T Consensus 224 ~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~ 303 (533)
T PRK07798 224 PAPPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIAS 303 (533)
T ss_pred EecchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEE
Confidence 99999999999999999999999999873 3567889999999999999999865533 333221 23456789999999
Q ss_pred ecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCccccccccccc--CCCCCceEEEEcCCCCccCCCCCceeEE
Q 004825 479 TGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFS--TPAMGCKLFILGNDGCPIPQNVPGMGEL 556 (728)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG--~p~~~~~v~i~d~~g~~vp~g~~giGEl 556 (728)
||+++++++.+++.+.+++..+++.||+||++.+....... ...+.| ++.++..++|+|++|++++.|..+.|++
T Consensus 304 gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~---~~~~~g~~~~~~~~~~~i~~~~~~~~~~g~~~~g~l 380 (533)
T PRK07798 304 GGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAK---GAVHTGGPRFTIGPRTVVLDEDGNPVEPGSGEIGWI 380 (533)
T ss_pred CCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCC---CCccCCCCccCCCceEEEECCCCCCCCCCCCCeeEE
Confidence 99999999999998888778999999999987544332221 112334 7889999999999999999998656888
Q ss_pred EEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCC
Q 004825 557 ALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDS 636 (728)
Q Consensus 557 ~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p 636 (728)
+.++...- .|+++++.++..|... +|.+||+|||+|++++||+++++||.|++||++|++|+|.|||++|. .+|
T Consensus 381 ~~~~~~~~--gy~~~~~~t~~~f~~~---~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~-~~~ 454 (533)
T PRK07798 381 ARRGHIPL--GYYKDPEKTAETFPTI---DGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALK-AHP 454 (533)
T ss_pred EeecCccc--cccCChhhhHHhhccC---CCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHH-hCc
Confidence 77664332 3566777787777652 36679999999999999999999999999999999999999999995 899
Q ss_pred CeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHH
Q 004825 637 NVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLR 716 (728)
Q Consensus 637 ~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 716 (728)
.|.+++|++.+++..+ +.+++++++.+ +. ..+.+++++ +++++|+.|++|..++++++||+|++||++|+.|+
T Consensus 455 ~v~~~~v~~~~~~~~~-~~~~~~v~~~~-~~-~~~~~~l~~----~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~~~ 527 (533)
T PRK07798 455 DVADALVVGVPDERWG-QEVVAVVQLRE-GA-RPDLAELRA----HCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRWAK 527 (533)
T ss_pred cceeEEEEeccCcccC-ceEEEEEEECC-CC-CCCHHHHHH----HHhhhcccCCCCeEEEEcccCCCCCcchhhHHHHh
Confidence 9999999998877666 78889988876 43 345554444 67788999999999999999999999999999999
Q ss_pred HHHHh
Q 004825 717 KQLAQ 721 (728)
Q Consensus 717 ~~~~~ 721 (728)
++.++
T Consensus 528 ~~~~~ 532 (533)
T PRK07798 528 EQAAE 532 (533)
T ss_pred hhhcc
Confidence 99865
No 82
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=4.7e-63 Score=558.13 Aligned_cols=500 Identities=23% Similarity=0.295 Sum_probs=406.7
Q ss_pred chHhhhhcccc-cCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Q 004825 176 VNPAKNCLSVN-SKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLA 254 (728)
Q Consensus 176 ~~~~~~~l~~~-~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA 254 (728)
.|.++++++++ ++.+||++|++.... .+||.||.++++++|++|.+.|+++|++|+++++|+++++++++|
T Consensus 3 ~~~~~~~~~~~~~~~~p~~~a~~~~~~--------~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a 74 (508)
T TIGR02262 3 YNAAEDLLDRNVVEGRGGKTAFIDDIS--------SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLG 74 (508)
T ss_pred chHHHHHHHHHHhcccCCceEEEeCCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 57888988887 577999999998766 999999999999999999999999999999999999999999999
Q ss_pred HHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCC--cEEEEcCCCCCcccccCCCCc
Q 004825 255 IVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAP--LAIVIPAKGSSFSMKLRDGDI 331 (728)
Q Consensus 255 ~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~ 331 (728)
|+++|++++|+++.++.+++.++++.++++++++++.... .. +.....+. ..+.+... .....
T Consensus 75 ~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 140 (508)
T TIGR02262 75 AIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLP------VIKAALGKSPHLEHRVVVGRP--------EAGEV 140 (508)
T ss_pred HHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHH------HHHHHHhcCCCccEEEEeCCC--------Ccccc
Confidence 9999999999999999999999999999999999875321 11 11111111 12222111 01122
Q ss_pred CHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHH-HHHhcCCCCCCEEEecCCcchhh
Q 004825 332 SWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAAD-AWCHMDIRKADIVAWPTNLGWMM 410 (728)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~ 410 (728)
.+.++..... ....+....++++++++|||||||.||||+++|+++...+.. ....++++++|+++...|++|+.
T Consensus 141 ~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~ 216 (508)
T TIGR02262 141 QLAELLATES----EQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAY 216 (508)
T ss_pred cHHHHhhcCC----CccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHH
Confidence 3333332211 111223445789999999999999999999999999877655 34567899999999999999999
Q ss_pred hH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHH
Q 004825 411 GP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYL 489 (728)
Q Consensus 411 ~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~ 489 (728)
++ ..++.++..|+++++.++..++..+++.|+++++|++.++|+++..+++.........+++|.+++||+++++++.+
T Consensus 217 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~ 296 (508)
T TIGR02262 217 GLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQ 296 (508)
T ss_pred HHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHH
Confidence 88 56778999999999988766788999999999999999999999988765443334567899999999999999998
Q ss_pred HHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccc
Q 004825 490 WLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTL 569 (728)
Q Consensus 490 ~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~ 569 (728)
.|.+.++ +++++.||+||++........ ......++|+|++|+.++|+|++++++|.|+. |||++.+.....+ |+
T Consensus 297 ~~~~~~~-~~v~~~YG~tE~~~~~~~~~~-~~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~--Gel~i~~~~~~~g-Y~ 371 (508)
T TIGR02262 297 RWQARFG-VDIVDGIGSTEMLHIFLSNLP-GDVRYGTSGKPVPGYRLRLVGDGGQDVAAGEP--GELLISGPSSATM-YW 371 (508)
T ss_pred HHHHHhC-CchhhCccccccCceeecCCc-cCCCCCCcCCCCCCcEEEEECCCCCCCCCCCe--eEEEEecCccccc-cC
Confidence 8888774 799999999999865443322 22345689999999999999999999999986 9999976554332 45
Q ss_pred cCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCC
Q 004825 570 LNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPP 649 (728)
Q Consensus 570 ~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~ 649 (728)
++++.++..|.. +||+|||++++++||.++++||.||+||++|.+|+|.+||++|. .+|+|.++++++.++.
T Consensus 372 ~~~~~~~~~~~~-------~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~-~~~~v~~~~~~~~~~~ 443 (508)
T TIGR02262 372 NNRAKTRDTFQG-------EWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALI-QHPAVLEAAVVGVEDE 443 (508)
T ss_pred CCHHHhHhhhhc-------CceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHH-hCCCeeEEEEEecccc
Confidence 666777666632 39999999999999999999999999999999999999999995 8999999999998776
Q ss_pred CCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHH
Q 004825 650 DGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQ 718 (728)
Q Consensus 650 ~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~ 718 (728)
..+ +.+++|++..+ +. ...+.+.+.++++++++|+++++|..++.+++||+|++||++|++|+++
T Consensus 444 ~~~-~~~~~~v~~~~-~~--~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 444 DGL-IKPKAFIVLRP-GQ--DIDTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred CCC-ceeEEEEEeCC-CC--ccccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccCC
Confidence 665 78889998776 33 1223455677778999999999999999999999999999999998753
No 83
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.9e-63 Score=557.43 Aligned_cols=485 Identities=22% Similarity=0.173 Sum_probs=387.4
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNAL-GLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
...+|++++. ++++|+++.+. ++||+||.++++++|++|+++ |++++++|+|+++|++++++++|||++
T Consensus 7 ~~~~l~~~a~--~~~~a~~~~~~--------~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~ 76 (529)
T PRK07867 7 VAELLLPLAE--DDDRGLYFEDS--------FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAAL 76 (529)
T ss_pred HHHHHHHhcc--cCCceEEECCc--------EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 3355666653 78999998776 999999999999999999997 899999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHH
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFL 337 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 337 (728)
+|++++|+++.++.+++.+++++++++++|+++.... .++.......++... ...+.+.+
T Consensus 77 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~---------~~~~~~~~~~~~~~~-----------~~~~~~~l 136 (529)
T PRK07867 77 SGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAE---------LLDGLDPGVRVINVD-----------SPAWADEL 136 (529)
T ss_pred cCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHH---------HHHhhccCceEEEec-----------cccHHHHh
Confidence 9999999999999999999999999999999875431 111111111112111 11233333
Q ss_pred HhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHH-HHH
Q 004825 338 ERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPW-LVY 416 (728)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~ 416 (728)
..... .........++++++|+|||||||.||||+++|+++..........++++.+|+++...|++|..+++ .++
T Consensus 137 ~~~~~---~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~ 213 (529)
T PRK07867 137 AAHRD---AEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWA 213 (529)
T ss_pred cccCC---CCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHH
Confidence 22111 11122345678999999999999999999999999998888888888999999999999999999984 567
Q ss_pred HHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccC
Q 004825 417 ASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRAL 496 (728)
Q Consensus 417 ~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~ 496 (728)
.++..|+++++.+. .++..+++.++++++|++.++|+.+..++..........+++|. ++||+.+++.. .++.+.+
T Consensus 214 ~~l~~G~~~~~~~~-~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~- 289 (529)
T PRK07867 214 VALAAGASIALRRK-FSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF- 289 (529)
T ss_pred HHHhcCceEEecCC-CCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-
Confidence 78999999988753 56788999999999999999999999988764332233457884 56888887664 5566666
Q ss_pred CCCeEecccccccccccccCCcccccccccccCCCCCceEEEEc-CCCCccCCCC------------CceeEEEE-eccc
Q 004825 497 YKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILG-NDGCPIPQNV------------PGMGELAL-SPLI 562 (728)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d-~~g~~vp~g~------------~giGEl~v-~~~~ 562 (728)
++++++.||+||+++...... .....++|.|+++ ++|+| +++++++.|+ . |||++ .+..
T Consensus 290 g~~l~~~YG~TE~~~~~~~~~---~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~--Gel~i~~g~~ 362 (529)
T PRK07867 290 GCVVVDGFGSTEGGVAITRTP---DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAI--GELVNTAGPG 362 (529)
T ss_pred CCcEEEeecccccccccccCC---CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcc--eEEEEecCCc
Confidence 489999999999986543221 1234679999999 67887 4688898887 5 99998 6544
Q ss_pred cCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeE
Q 004825 563 FGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETA 642 (728)
Q Consensus 563 ~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~ 642 (728)
+.. .|+++++.+.+.|. +| ||+|||+|++++||+++++||.||+||++|++|+|.|||++|. .||+|.+|+
T Consensus 363 ~~~-gy~~~~~~~~~~~~-----~g--~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~~~~ 433 (529)
T PRK07867 363 GFE-GYYNDPEADAERMR-----GG--VYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILL-RYPDATEVA 433 (529)
T ss_pred ccc-cccCChHhhhhhhc-----CC--eEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHH-hCCCeeEEE
Confidence 332 24566677776663 23 9999999999999999999999999999999999999999996 899999999
Q ss_pred EEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 643 AIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 643 Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
|++++++..| ++++++++..+ +. ..+.+++++.+++ +..|++|++|..|+++++||+|++||++|+.|+++...
T Consensus 434 V~g~~~~~~g-~~~~a~vv~~~-~~-~~~~~~l~~~~~~--~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~ 507 (529)
T PRK07867 434 VYAVPDPVVG-DQVMAALVLAP-GA-KFDPDAFAEFLAA--QPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVD 507 (529)
T ss_pred EEeccCCCCC-eeEEEEEEECC-CC-CCCHHHHHHHHHh--hccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCC
Confidence 9999988877 88999999876 54 4666777665433 23599999999999999999999999999999998754
No 84
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.4e-63 Score=561.73 Aligned_cols=507 Identities=21% Similarity=0.228 Sum_probs=398.1
Q ss_pred hHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Q 004825 177 NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIV 256 (728)
Q Consensus 177 ~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~l 256 (728)
+...++|.++++++|+++|+++.+. .+||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||+
T Consensus 23 ~~i~~~l~~~a~~~p~~~a~~~~~~--------~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~ 94 (557)
T PRK07059 23 PSLADLLEESFRQYADRPAFICMGK--------AITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVL 94 (557)
T ss_pred CCHHHHHHHHHHHcCCCceEEEcCc--------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 3455778888899999999999776 99999999999999999999999999999999999999999999999
Q ss_pred HcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCC-cEEEEcCCCCCc-------------
Q 004825 257 LAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAP-LAIVIPAKGSSF------------- 322 (728)
Q Consensus 257 kaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~------------- 322 (728)
++|++++|++|.++.+++.+++++++++++|+++......+ ........ .+++........
T Consensus 95 ~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (557)
T PRK07059 95 RAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQ-----QVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRV 169 (557)
T ss_pred hcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHH-----HhhcccCCceeEEecccccccccccccccccccc
Confidence 99999999999999999999999999999999875321000 11111111 111111100000
Q ss_pred ----ccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHh----cCC
Q 004825 323 ----SMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCH----MDI 394 (728)
Q Consensus 323 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~----~~~ 394 (728)
......+...+.++...... .........++++|+|+|||||||.||||+++|++++..+...... +..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~ 246 (557)
T PRK07059 170 KKMVPAWSLPGHVRFNDALAEGAR---QTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEK 246 (557)
T ss_pred cccccccCCCCcccHHHHhhccCC---CCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccc
Confidence 00001223345444433211 1122344567899999999999999999999999987665433221 111
Q ss_pred C---CCCEEEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCC
Q 004825 395 R---KADIVAWPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDW 470 (728)
Q Consensus 395 ~---~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l 470 (728)
. ..+.++...|++|.++. ...+.++..|++.++.+...++..+++.++++++|.+..+|+++..+.........++
T Consensus 247 ~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~ 326 (557)
T PRK07059 247 KPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDF 326 (557)
T ss_pred cCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCc
Confidence 1 23467788999998876 4667888999998887755577789999999999999999999999988765555667
Q ss_pred cCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCC
Q 004825 471 SSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNV 550 (728)
Q Consensus 471 ~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~ 550 (728)
+++|.++.||+++++.+.+++.+.+ ++++++.||+||++..++...........++|+|++|++++|+|++|+++|.|+
T Consensus 327 ~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~g~ 405 (557)
T PRK07059 327 SKLIVANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPSTEVSIRDDDGNDLPLGE 405 (557)
T ss_pred hhheEEEeccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCCCCCCCcCCcccCccCCcEEEEECCCCCCCCCCC
Confidence 8999999999999999988888766 489999999999987655443322234578999999999999999999999998
Q ss_pred CceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHH
Q 004825 551 PGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERI 630 (728)
Q Consensus 551 ~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~ 630 (728)
. |||++.+..... .|+++++.+.+.|..+ | ||+|||+|++++||.++++||+|++||++|++|+|.|||++
T Consensus 406 ~--Gel~v~g~~~~~-gY~~~~~~~~~~~~~~----g--~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~ 476 (557)
T PRK07059 406 P--GEICIRGPQVMA-GYWNRPDETAKVMTAD----G--FFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEV 476 (557)
T ss_pred c--eEEEEeCCccch-hhhcCHHHHhhhcccC----C--ceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHH
Confidence 7 999997654432 2455667777666532 3 99999999999999999999999999999999999999999
Q ss_pred HhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCch
Q 004825 631 CNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKV 710 (728)
Q Consensus 631 l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKv 710 (728)
|. .+|+|.+++|++.+++..| +.++++++... . ..+.++ ++++++++|+.|++|..+++++++|+|++||+
T Consensus 477 l~-~~~~V~~~~v~~~~~~~~g-e~~~~~v~~~~-~--~~~~~~----l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~ 547 (557)
T PRK07059 477 VA-SHPGVLEVAAVGVPDEHSG-EAVKLFVVKKD-P--ALTEED----VKAFCKERLTNYKRPKFVEFRTELPKTNVGKI 547 (557)
T ss_pred HH-hCCceeEEEEEecccCCCC-eeEEEEEEeCC-C--CCCHHH----HHHHHHHhcccccCCcEEEEeccCCCCcccce
Confidence 95 8999999999999887777 78999888654 2 234444 44568889999999999999999999999999
Q ss_pred hHHHHHHH
Q 004825 711 MRRVLRKQ 718 (728)
Q Consensus 711 dR~~L~~~ 718 (728)
+|+.|+++
T Consensus 548 ~r~~L~~~ 555 (557)
T PRK07059 548 LRRELRDG 555 (557)
T ss_pred eHHHHHhh
Confidence 99999865
No 85
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.2e-62 Score=558.97 Aligned_cols=514 Identities=19% Similarity=0.177 Sum_probs=399.6
Q ss_pred CCCCCCCcchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH
Q 004825 168 GQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVN 247 (728)
Q Consensus 168 ~~w~~~~~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~ 247 (728)
..|..........++|.++++++|+++|+++.+. ++||.||+++++++|++|.+.|+++|++|+|+++|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~ 83 (541)
T TIGR03205 12 VRWDATIARGTLPDLLSKAAADYGPRPALEFRDR--------PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPD 83 (541)
T ss_pred CCcccCCCCCCHHHHHHHHHHHcCCCceEEECCc--------EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChH
Confidence 4565444444566788888899999999998776 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhh-cCCcEEEEcCCCCCc---
Q 004825 248 SVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDA-QAPLAIVIPAKGSSF--- 322 (728)
Q Consensus 248 ~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~~~~~~~--- 322 (728)
+++++|||+++|++++|++|.++.+++.+++++++++.+++++... ..... +.... .....+++.......
T Consensus 84 ~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (541)
T TIGR03205 84 HPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAA----LLPMALKFLEKGLLDRLIVCEDDNWGKVGT 159 (541)
T ss_pred HHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchh----hhHHHHHhhhcccceEEEEecccccccccc
Confidence 9999999999999999999999999999999999999999976310 01100 11111 111222222211000
Q ss_pred ---ccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHH-----hcCC
Q 004825 323 ---SMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWC-----HMDI 394 (728)
Q Consensus 323 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~-----~~~~ 394 (728)
..........+.++...... ........++++++++|||||||.||||+++|+++......... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~ 235 (541)
T TIGR03205 160 PQAPIPADPRIVTYADFVKGAAA----PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATR 235 (541)
T ss_pred cccccCCCcccccHHHHHhcCCC----CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccC
Confidence 00011123445555432211 11122356789999999999999999999999998765543211 1122
Q ss_pred CCCCEEEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCe
Q 004825 395 RKADIVAWPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSI 473 (728)
Q Consensus 395 ~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~l 473 (728)
...+++++..|++|..+. ..++.++..|+++++.+ ..++..+++.|+++++|++.++|+++..|++........++++
T Consensus 236 ~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l 314 (541)
T TIGR03205 236 GDVERVICVLPLFHIYALTVILLRSLRRGDLISLHQ-RFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSL 314 (541)
T ss_pred CCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCcccc
Confidence 345789999999998887 45788999999988875 3578899999999999999999999999987544444567899
Q ss_pred eEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEE--cCCCCccCCCCC
Q 004825 474 RCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFIL--GNDGCPIPQNVP 551 (728)
Q Consensus 474 r~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~--d~~g~~vp~g~~ 551 (728)
|.+++||+++++++.+++.+.+ +.++++.||+||++..++...........++|.|++++.++|+ |+++++++.|+.
T Consensus 315 ~~i~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~ 393 (541)
T TIGR03205 315 ATIGSGGAPLPVEVANFFERKT-GLKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEV 393 (541)
T ss_pred ceEEEccccCCHHHHHHHHHHh-CCCeecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCCccCCCCCe
Confidence 9999999999999988887765 4889999999999876554433333345689999999998875 677899999986
Q ss_pred ceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHH
Q 004825 552 GMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERIC 631 (728)
Q Consensus 552 giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l 631 (728)
|||++++..+..+ |+++++.+++.|.. + ||+|||++++++||+++++||.||+||++|++|+|.|||+++
T Consensus 394 --Gel~v~~~~~~~g-y~~~~~~~~~~~~~-----~--~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l 463 (541)
T TIGR03205 394 --GELRIRGPNVTRG-YWNRPEESAEAFVG-----D--RFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAI 463 (541)
T ss_pred --eEEEEecCCcccc-ccCChhhhHhhhcc-----C--CcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHH
Confidence 9999976544332 45566777777742 2 899999999999999999999999999999999999999999
Q ss_pred hcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchh
Q 004825 632 NAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVM 711 (728)
Q Consensus 632 ~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvd 711 (728)
. .|++|.+++|++++++..+ +.+++++++.. +....+..+ ++++++++|++|++|..++++++||+|++||++
T Consensus 464 ~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~-~~~~~~~~~----l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~ 536 (541)
T TIGR03205 464 Y-EHPGVQEVIVIGIPDQYRG-EAAKAFVKLRP-GAKPFSLDE----LRAFLAGKLGKHELPVAVEFVDELPRTPVGKLS 536 (541)
T ss_pred H-hCCCeeeEEEEecCCcccC-ceEEEEEEECC-CCCcCCHHH----HHHHHHhhcccccCCcEEEEeccCCCCccccee
Confidence 6 8999999999999887666 78999998876 431234444 455688899999999999999999999999999
Q ss_pred HHHHH
Q 004825 712 RRVLR 716 (728)
Q Consensus 712 R~~L~ 716 (728)
|++|+
T Consensus 537 r~~l~ 541 (541)
T TIGR03205 537 RHELR 541 (541)
T ss_pred HhhcC
Confidence 99874
No 86
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-62 Score=556.10 Aligned_cols=496 Identities=19% Similarity=0.203 Sum_probs=402.9
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..++|.++++++|+++|+++.+. .+||.||.++++++|+.|.+.|+++|++|++++++++++++++|||+++
T Consensus 14 ~~~~~~~~~~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~ 85 (524)
T PRK06188 14 YGHLLVSALKRYPDRPALVLGDT--------RLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLA 85 (524)
T ss_pred HHHHHHHHHHHCCCCeEEEECCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 44667788889999999999876 9999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcC--CcEEEEcCCCCCcccccCCCCcCHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQA--PLAIVIPAKGSSFSMKLRDGDISWLD 335 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~ 335 (728)
|++++|++|..+.+++..++++++++.+++++... .... ....... ...+.+.... ...+
T Consensus 86 G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 148 (524)
T PRK06188 86 GLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPF-----VERALALLARVPSLKHVLTLGPVP------------DGVD 148 (524)
T ss_pred CCEEEecccCCCHHHHHHHHHhcCceEEEEecchh-----hHHHHHHhhhcCCceEEEEeCCcc------------chhh
Confidence 99999999999999999999999999999987521 0000 1111111 1112111110 0111
Q ss_pred HHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHH
Q 004825 336 FLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLV 415 (728)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 415 (728)
+............ .....++++++|+|||||||.||+|+++|+++.+.+......+++..+|++++..|++|..++. +
T Consensus 149 ~~~~~~~~~~~~~-~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~ 226 (524)
T PRK06188 149 LLAAAAKFGPAPL-VAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-F 226 (524)
T ss_pred HHHhhhccCcccc-cccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-H
Confidence 1111111011111 1122456799999999999999999999999999988888889999999999999999988764 6
Q ss_pred HHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhcc
Q 004825 416 YASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRA 495 (728)
Q Consensus 416 ~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~ 495 (728)
+.++..|+++++.+. .++..+++.++++++|++.++|+++..+++.......+++++|.+++||++++++....+.+.+
T Consensus 227 ~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~ 305 (524)
T PRK06188 227 LPTLLRGGTVIVLAK-FDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF 305 (524)
T ss_pred HHHHHcCCEEEEcCC-CCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh
Confidence 788999999999875 5678999999999999999999999999987665666789999999999999999888877766
Q ss_pred CCCCeEecccccccccccccCCcc-----cccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCcccc
Q 004825 496 LYKPVIEYCGGTEIGGGFITGSLL-----QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLL 570 (728)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~-----~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~ 570 (728)
+ ..+++.||+||++..++..... ......++|+|++|+.++|+|+++++++.|+. |||+|.+..... .|++
T Consensus 306 ~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~--Gel~v~~~~~~~-gy~~ 381 (524)
T PRK06188 306 G-PIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEV--GEICVRGPLVMD-GYWN 381 (524)
T ss_pred C-chhhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCe--eEEEEECcchhh-hhcC
Confidence 5 6799999999997654433221 12345689999999999999999999999986 999997665443 2355
Q ss_pred CccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCC
Q 004825 571 NANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPD 650 (728)
Q Consensus 571 ~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~ 650 (728)
+++.+...|. +| ||+|||+|++++||.++++||.|++||++|++|+|.+||++|. .||+|.+++|++.+++.
T Consensus 382 ~~~~~~~~~~-----~g--~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~-~~~~v~~~~v~~~~~~~ 453 (524)
T PRK06188 382 RPEETAEAFR-----DG--WLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLA-EHPAVAQVAVIGVPDEK 453 (524)
T ss_pred ChHHhhhhhc-----CC--ceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHH-hCCCeeEEEEEeccCCC
Confidence 6666665553 23 9999999999999999999999999999999999999999995 99999999999988877
Q ss_pred CCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 651 GGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 651 ~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
.+ +.+++++++.+ +. ..+.. .|++++++.++.|++|..|+++++||+|++||++|++|++++.+
T Consensus 454 ~~-~~~~~~v~~~~-~~-~~~~~----~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~ 517 (524)
T PRK06188 454 WG-EAVTAVVVLRP-GA-AVDAA----ELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWE 517 (524)
T ss_pred cC-ceEEEEEEECC-CC-CCCHH----HHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHh
Confidence 66 88999999876 33 23434 45556888899999999999999999999999999999999854
No 87
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-62 Score=557.82 Aligned_cols=509 Identities=19% Similarity=0.186 Sum_probs=397.9
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
..+.|.++++++|+++|++..+. ++||+||.++++++|+.|.+.|+++||+|+|+++|+.++++++|||+++
T Consensus 12 l~~~l~~~a~~~p~~~a~~~~~~--------~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~ 83 (540)
T PRK06164 12 LASLLDAHARARPDAVALIDEDR--------PLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARL 83 (540)
T ss_pred HHHHHHHHHHhCCCCeEEecCCC--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHh
Confidence 45667888899999999996655 8999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhc-------CCcEEEEcCCCCCcccccCCCCc
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQ-------APLAIVIPAKGSSFSMKLRDGDI 331 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~ 331 (728)
|++++|+++..+.+++.+++++++++++|++++... +.....+... ...++++........ .....
T Consensus 84 G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 156 (540)
T PRK06164 84 GATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKG----IDFAAILAAVPPDALPPLRAIAVVDDAADATP---APAPG 156 (540)
T ss_pred CcEEEecCCCCCcHHHHHHHHhcCccEEEEcccccc----ccHHHHhhcccccccCCcceEEEeccCcccCC---CCCcc
Confidence 999999999999999999999999999999875421 1111111110 012222221110000 00000
Q ss_pred CHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhh
Q 004825 332 SWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMG 411 (728)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 411 (728)
.+.++..................++++++++|||||||.||||+++|+++.+.+......+++..+++++++.|++|.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g 236 (540)
T PRK06164 157 ARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFG 236 (540)
T ss_pred cccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHH
Confidence 11111110000000000112335689999999999999999999999999998888888899999999999999999999
Q ss_pred HHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeec-CCCCHHHHHH
Q 004825 412 PWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTG-EASNVDEYLW 490 (728)
Q Consensus 412 ~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gG-e~l~~~~~~~ 490 (728)
+..++.++..|+++++.+. .++..+++.|+++++|+++++|+++..|.+.. ....++++++.+.++| .+...+..++
T Consensus 237 ~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~ 314 (540)
T PRK06164 237 FSTLLGALAGGAPLVCEPV-FDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAAL 314 (540)
T ss_pred HHHHHHHHhcCceEEecCC-CCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHH
Confidence 9889999999999998753 56788999999999999999999999998762 3445688999887776 4455556666
Q ss_pred HHhccCCCCeEecccccccccccccCCccc--ccccccccCCC-CCceEEEEcC-CCCccCCCCCceeEEEEeccccCCC
Q 004825 491 LMGRALYKPVIEYCGGTEIGGGFITGSLLQ--AQSLAAFSTPA-MGCKLFILGN-DGCPIPQNVPGMGELALSPLIFGAS 566 (728)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~-~~~~v~i~d~-~g~~vp~g~~giGEl~v~~~~~~~~ 566 (728)
+... ++++++.||+||++..++...... .....+.|.|+ +++.++|+|+ ++++++.|+. |||+|.+..+..
T Consensus 315 ~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~~~- 389 (540)
T PRK06164 315 ARAR--GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGES--GEIEIRAPSLMR- 389 (540)
T ss_pred Hhhc--CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCe--eEEEEecccccc-
Confidence 6544 588999999999987655443321 12234567775 7999999994 6899999986 999997665543
Q ss_pred ccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEee
Q 004825 567 STLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGV 646 (728)
Q Consensus 567 ~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~ 646 (728)
.|+++++.|+..|..+ | ||+|||+|++++||.+++.||.|++||++|++|+|.|||++|. .||+|.+++|++.
T Consensus 390 gY~~~~~~t~~~~~~~----~--~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~-~~~~v~~~~v~~~ 462 (540)
T PRK06164 390 GYLDNPDATARALTDD----G--YFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALE-ALPGVAAAQVVGA 462 (540)
T ss_pred cccCCchhhhhcccCC----C--ceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHH-hCCCceeEEEEec
Confidence 3467788888777643 2 9999999999999999999999999999999999999999995 8999999999998
Q ss_pred cCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCC---chhHHHHHHHHHhhc
Q 004825 647 PPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATN---KVMRRVLRKQLAQLD 723 (728)
Q Consensus 647 ~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~G---KvdR~~L~~~~~~~~ 723 (728)
+. .++ ..+++++++.+ +. ..+.++ +.++++++||+|++|..|++++.+|+|++| |++|+.|+++++++.
T Consensus 463 ~~-~~~-~~~~~~vv~~~-~~-~~~~~~----l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~~ 534 (540)
T PRK06164 463 TR-DGK-TVPVAFVIPTD-GA-SPDEAG----LMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQARL 534 (540)
T ss_pred CC-CCc-eeEEEEEEeCC-CC-CCCHHH----HHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHhh
Confidence 74 333 78999999876 43 344444 445688899999999999999999999999 999999999988754
Q ss_pred c
Q 004825 724 Q 724 (728)
Q Consensus 724 ~ 724 (728)
+
T Consensus 535 ~ 535 (540)
T PRK06164 535 A 535 (540)
T ss_pred h
Confidence 3
No 88
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.4e-62 Score=560.91 Aligned_cols=506 Identities=19% Similarity=0.208 Sum_probs=397.4
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALN-ALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~-~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
..+.|.++++++|+++|+++.++ ++||+||.++++++|+.|. +.|+++|++|+++++|++++++++|||++
T Consensus 27 ~~~~l~~~~~~~~~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 98 (560)
T PRK08751 27 VAEVFATSVAKFADRPAYHSFGK--------TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLR 98 (560)
T ss_pred HHHHHHHHHHhCCCCceEEECCc--------eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 45667888889999999998776 9999999999999999997 68999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCC-----------------
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGS----------------- 320 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------------- 320 (728)
+|++++|++|.++.+++.+++++++++++++++..... + ...........+++.....
T Consensus 99 ~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (560)
T PRK08751 99 AGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTT---V--QQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYV 173 (560)
T ss_pred hCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHH---H--HHHhhCCCccEEEEechhhhcccccchhhhhhhhhh
Confidence 99999999999999999999999999999998753210 0 0111111111111110000
Q ss_pred --CcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcC----C
Q 004825 321 --SFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMD----I 394 (728)
Q Consensus 321 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~----~ 394 (728)
........+...+.+....... .........++++++++|||||||.||||+++|+++...+.+....++ +
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~ 250 (560)
T PRK08751 174 KKLVPEYRINGAIRFREALALGRK---HSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKL 250 (560)
T ss_pred hccccccCCCccccHHHHHhccCC---CCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhcccccc
Confidence 0000001122334443332211 111223456789999999999999999999999999887776655443 3
Q ss_pred CCC-CEEEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcC
Q 004825 395 RKA-DIVAWPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSS 472 (728)
Q Consensus 395 ~~~-d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~ 472 (728)
..+ ++++...++.|..++ ...+.++..|+++++.....++..+++.|+++++|++..+|+++..+.+.......++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 330 (560)
T PRK08751 251 EEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSS 330 (560)
T ss_pred CCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhh
Confidence 344 567778899988887 346677888998888766567788999999999999999999999998876555567889
Q ss_pred eeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCc
Q 004825 473 IRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPG 552 (728)
Q Consensus 473 lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~g 552 (728)
+|.+++||+++++.+.+.+.+.+ ++++++.||+||++..++..........+++|.|++++.++|+|++|++++.|+.
T Consensus 331 lr~v~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~- 408 (560)
T PRK08751 331 LKMTLGGGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPSTDACIKDDAGTVLAIGEI- 408 (560)
T ss_pred heeeeeCCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceecccccccccCCCcCccCCCceEEEECCCCCCCCCCCc-
Confidence 99999999999999988888765 4789999999999875544332223345789999999999999999999999986
Q ss_pred eeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHh
Q 004825 553 MGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICN 632 (728)
Q Consensus 553 iGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~ 632 (728)
|||+|.+..+.. .|+++++.++++|..+ | ||+|||+|++++||.++++||.||+||++|++|+|.|||++|.
T Consensus 409 -Gel~v~~~~~~~-gy~~~~~~~~~~~~~~----g--~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~ 480 (560)
T PRK08751 409 -GELCIKGPQVMK-GYWKRPEETAKVMDAD----G--WLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIA 480 (560)
T ss_pred -eEEEEecCccch-hhcCChhhhhhccccC----C--CccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHH
Confidence 999996655433 2456777777777432 3 9999999999999999999999999999999999999999995
Q ss_pred cCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhH
Q 004825 633 AVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMR 712 (728)
Q Consensus 633 ~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR 712 (728)
.+|+|.+|+|++++++..| +.++++++... . ..+.++++ ++++++|++|++|..++++++||+|++||++|
T Consensus 481 -~~~~v~~~~v~~~~~~~~g-e~~~~~v~~~~-~--~~~~~~l~----~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r 551 (560)
T PRK08751 481 -MMPGVLEVAAVGVPDEKSG-EIVKVVIVKKD-P--ALTAEDVK----AHARANLTGYKQPRIIEFRKELPKTNVGKILR 551 (560)
T ss_pred -hCcCeeeeEEEecCCCCCC-ceEEEEEEcCC-C--CCCHHHHH----HHHHHhhhhccCCeEEEEhhhCCCCccccccH
Confidence 9999999999999887776 67777776543 2 23444444 46778899999999999999999999999999
Q ss_pred HHHHHHH
Q 004825 713 RVLRKQL 719 (728)
Q Consensus 713 ~~L~~~~ 719 (728)
++|++..
T Consensus 552 ~~L~~~~ 558 (560)
T PRK08751 552 RELRDAA 558 (560)
T ss_pred HHHHHhh
Confidence 9998763
No 89
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-62 Score=559.99 Aligned_cols=510 Identities=20% Similarity=0.242 Sum_probs=396.0
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
...++|.++++++|+++|+++.+. .+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||++
T Consensus 25 ~~~~~~~~~a~~~p~~~a~~~~~~--------~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 96 (563)
T PRK06710 25 PLHKYVEQMASRYPEKKALHFLGK--------DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLL 96 (563)
T ss_pred cHHHHHHHHHHHCCCceEEEecCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 345667778889999999999776 899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcc--------------
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFS-------------- 323 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------- 323 (728)
+|++++|++|.++.+++.++++.++++++++++......... ........+++........
T Consensus 97 ~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (563)
T PRK06710 97 AGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNV-----QSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQ 171 (563)
T ss_pred cCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhcc-----chhhccceeEEeccccccccccccccchhhccc
Confidence 999999999999999999999999999999987543211111 0000001111110000000
Q ss_pred --ccc-CCC---CcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHH-hcCCCC
Q 004825 324 --MKL-RDG---DISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWC-HMDIRK 396 (728)
Q Consensus 324 --~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~-~~~~~~ 396 (728)
... .+. ...|.++.... ..........+++++|++|||||||.||||+++|+++......... .++...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 247 (563)
T PRK06710 172 SNLVVKVSESETIHLWNSVEKEV----NTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKE 247 (563)
T ss_pred ccccccccccchhhhhhhhhhcc----ccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCC
Confidence 000 000 00111111100 0011111223578999999999999999999999998755433322 234444
Q ss_pred -CCEEEecCCcchhhhHH-HHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCee
Q 004825 397 -ADIVAWPTNLGWMMGPW-LVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIR 474 (728)
Q Consensus 397 -~d~~l~~~~~~~~~~~~-~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr 474 (728)
++++++..|++|..+.. .++.++..|+++++.+. .++..+++.|+++++|++.++|+++..++.........++++|
T Consensus 248 ~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr 326 (563)
T PRK06710 248 GEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPK-FDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIR 326 (563)
T ss_pred CCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCC-CCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhh
Confidence 45788999999998874 46678999999998764 5778899999999999999999999999876555555678999
Q ss_pred EEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEc-CCCCccCCCCCce
Q 004825 475 CFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILG-NDGCPIPQNVPGM 553 (728)
Q Consensus 475 ~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d-~~g~~vp~g~~gi 553 (728)
.+++||+++++++.+++.+.+ +.+++|.||+||++..............+++|+|.+++.++|+| ++++++|.|+.
T Consensus 327 ~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~-- 403 (563)
T PRK06710 327 ACISGSAPLPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEI-- 403 (563)
T ss_pred heeeCCCcCCHHHHHHHHHhh-CCCEecccccccCccccccCcccccccCCccCCCCCCCeEEEEECCCCccCCCCCc--
Confidence 999999999999998887766 47899999999998654333222233456899999999999998 56899999986
Q ss_pred eEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhc
Q 004825 554 GELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNA 633 (728)
Q Consensus 554 GEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~ 633 (728)
|||++.+..+..+ |+.+++.+...|. +| ||+|||++++++||.++++||.||+||++|.+|+|.|||++|.
T Consensus 404 Gel~v~g~~~~~g-Y~~~~~~~~~~~~-----~g--~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~- 474 (563)
T PRK06710 404 GEIVVKGPQIMKG-YWNKPEETAAVLQ-----DG--WLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLY- 474 (563)
T ss_pred eEEEEecCccchh-hhCChHHHhhhcc-----cC--cccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHH-
Confidence 9999976654432 4566777776663 23 9999999999999999999999999999999999999999995
Q ss_pred CCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHH
Q 004825 634 VDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRR 713 (728)
Q Consensus 634 ~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~ 713 (728)
.+|.|.+++|++.+++..| +.++++++..+ +. ..+.+++ +++++++|+.|++|..++++++||+|++||++|+
T Consensus 475 ~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~-~~-~~~~~~l----~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~ 547 (563)
T PRK06710 475 EHEKVQEVVTIGVPDPYRG-ETVKAFVVLKE-GT-ECSEEEL----NQFARKYLAAYKVPKVYEFRDELPKTTVGKILRR 547 (563)
T ss_pred hCcceeeEEEEccccCCcC-ceeEEEEEECC-CC-CCCHHHH----HHHHHHhcccccCCcEEEEcccCCCCccchhhHH
Confidence 8999999999999888777 78999998876 43 3444444 4467788999999999999999999999999999
Q ss_pred HHHHHHHhhcc
Q 004825 714 VLRKQLAQLDQ 724 (728)
Q Consensus 714 ~L~~~~~~~~~ 724 (728)
+|++++..-.+
T Consensus 548 ~L~~~~~~~~~ 558 (563)
T PRK06710 548 VLIEEEKRKNE 558 (563)
T ss_pred HHHHHHhhcCc
Confidence 99998876444
No 90
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-62 Score=546.41 Aligned_cols=456 Identities=21% Similarity=0.201 Sum_probs=378.0
Q ss_pred CCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCC
Q 004825 188 KRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIAD 267 (728)
Q Consensus 188 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p 267 (728)
++.++++|+++.++ ++||+||.++++++|..|+ ++|+|+++++|++++++++|||+++|++++|++|
T Consensus 11 ~~~~~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~ 77 (471)
T PRK07787 11 AAADIADAVRIGGR--------VLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPP 77 (471)
T ss_pred cccCCceEEEeCCc--------EEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCC
Confidence 56899999999877 9999999999999999996 4699999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCc
Q 004825 268 SFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENE 347 (728)
Q Consensus 268 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (728)
..+.+++.++++++++++++++..... ..++ ...+... ...+.
T Consensus 78 ~~~~~~l~~~l~~~~~~~il~~~~~~~--~~~~---------~~~~~~~-------------~~~~~------------- 120 (471)
T PRK07787 78 DSGVAERRHILADSGAQAWLGPAPDDP--AGLP---------HVPVRLH-------------ARSWH------------- 120 (471)
T ss_pred CCChHHHHHHHHhcCCCEEEecCCccc--cccc---------ceeeecc-------------ccccc-------------
Confidence 999999999999999999999763110 0000 0000000 00000
Q ss_pred cccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH-HHHHHHhhhCcEEE
Q 004825 348 FAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP-WLVYASLLNGASIA 426 (728)
Q Consensus 348 ~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv 426 (728)
......++++++++|||||||.||||+++|+++...+......+++..+|++++..|+.|..++ ..++.++..|++++
T Consensus 121 -~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~ 199 (471)
T PRK07787 121 -RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFV 199 (471)
T ss_pred -cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEE
Confidence 0112356899999999999999999999999999988888788899999999999999999887 46899999999998
Q ss_pred EeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccc
Q 004825 427 LYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGG 506 (728)
Q Consensus 427 l~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~ 506 (728)
+.+. .++..+++.|+ +++|++..+|+++..|++... ....++++|.+++||+++++++.+++.+.+ +.++++.||+
T Consensus 200 ~~~~-~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~-~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~ 275 (471)
T PRK07787 200 HTGR-PTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE-AARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGM 275 (471)
T ss_pred ecCC-CCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc-ccccccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCc
Confidence 8754 57789999999 999999999999999987532 234578999999999999999999888766 4789999999
Q ss_pred cccccccccCCcccccccccccCCCCCceEEEEcCCCCccCC-CCCceeEEEEeccccCCCccccCccccccccccCCCC
Q 004825 507 TEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQ-NVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSR 585 (728)
Q Consensus 507 TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~-g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~ 585 (728)
||++...+.. ........++|+|++|++++|+|+++++++. |. .+|||++.+..... .|+++++.+++.|..+
T Consensus 276 tE~~~~~~~~-~~~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~-~~Gei~v~g~~~~~-gy~~~~~~t~~~~~~~--- 349 (471)
T PRK07787 276 TETLITLSTR-ADGERRPGWVGLPLAGVETRLVDEDGGPVPHDGE-TVGELQVRGPTLFD-GYLNRPDATAAAFTAD--- 349 (471)
T ss_pred cccCcceecC-CCCcccCCcccccCCCcEEEEECCCCCCCCCCCC-CceEEEEECcccch-hhcCChhhchhcccCC---
Confidence 9998643332 2223345689999999999999999999873 43 14999997665443 2456777788777643
Q ss_pred CCceeEEeCceEEEecCceEEEEccc-CCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecC
Q 004825 586 NGQILRRHGDVFERTSGGYYRAHGRA-DDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKD 664 (728)
Q Consensus 586 ~g~~~y~TGDl~~~~~dG~l~~~GR~-d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~ 664 (728)
| ||+|||+|++++||.++++||. |++||++|++|+|.|||++|. .+|.|.+++|++.+++..+ +.+++|++...
T Consensus 350 -~--~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~a~v~~~~ 424 (471)
T PRK07787 350 -G--WFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALL-GHPGVREAAVVGVPDDDLG-QRIVAYVVGAD 424 (471)
T ss_pred -C--ceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHH-hCCCcceEEEEcccccccC-eEEEEEEEeCC
Confidence 2 9999999999999999999996 899999999999999999995 8999999999999887766 89999999744
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHH
Q 004825 665 SNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRK 717 (728)
Q Consensus 665 ~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 717 (728)
..+..++ .++++++|++|++|..++++++||+|.+||++|++|++
T Consensus 425 ----~~~~~~l----~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 425 ----DVAADEL----IDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLS 469 (471)
T ss_pred ----CCCHHHH----HHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhcc
Confidence 2344544 44688889999999999999999999999999999976
No 91
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.6e-62 Score=556.60 Aligned_cols=520 Identities=18% Similarity=0.180 Sum_probs=401.5
Q ss_pred CCCCCCcchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH
Q 004825 169 QWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNS 248 (728)
Q Consensus 169 ~w~~~~~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~ 248 (728)
.|++....+ ..+.|.++++.+|+++|+.+.+. .+||.||+++++++|++|.+.|+++|++|+|+++|++++
T Consensus 26 ~~~~~~~~~-l~~~l~~~a~~~p~~~al~~~~~--------~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~ 96 (567)
T PRK06178 26 PEYPHGERP-LTEYLRAWARERPQRPAIIFYGH--------VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQF 96 (567)
T ss_pred CCCCcCccc-HHHHHHHHHHHCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHH
Confidence 355555543 44567778889999999998776 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcC-CCCCcc---c
Q 004825 249 VVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPA-KGSSFS---M 324 (728)
Q Consensus 249 vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~---~ 324 (728)
+++++||+++|++++|++|.++.+++.+++++++++++++++...... ...........+++.. .+.... .
T Consensus 97 ~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l-----~~~~~~~~~~~i~~~~~~~~~~~~~~~ 171 (567)
T PRK06178 97 HIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVV-----EQVRAETSLRHVIVTSLADVLPAEPTL 171 (567)
T ss_pred HHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHH-----HHhhccCCcceEEEecccccccccccc
Confidence 999999999999999999999999999999999999999987542110 0111111112222211 000000 0
Q ss_pred cc-------CCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHH-hcCCCC
Q 004825 325 KL-------RDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWC-HMDIRK 396 (728)
Q Consensus 325 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~-~~~~~~ 396 (728)
.. ......+.++.+.... .+.........++++|+|+|||||||.||||+++|+++...+..... ...+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~ 250 (567)
T PRK06178 172 PLPDSLRAPRLAAAGAIDLLPALRA-CTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGE 250 (567)
T ss_pred ccccccccccccccccccHHHHhhc-cccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCC
Confidence 00 0001112223222211 11111223356799999999999999999999999998876554433 356788
Q ss_pred CCEEEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeE
Q 004825 397 ADIVAWPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRC 475 (728)
Q Consensus 397 ~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~ 475 (728)
+|+++.+.|++|..+. ..++.+|..|+++++.++ .++..++..|+++++|.+..+|..+..+.........++++++.
T Consensus 251 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~-~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~ 329 (567)
T PRK06178 251 DSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLAR-WDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQ 329 (567)
T ss_pred CcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCC-CCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchhee
Confidence 9999999999999987 568889999999999874 57889999999999999999999999988765444556778887
Q ss_pred EEe--ecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCc--cc----ccccccccCCCCCceEEEEc-CCCCcc
Q 004825 476 FGS--TGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSL--LQ----AQSLAAFSTPAMGCKLFILG-NDGCPI 546 (728)
Q Consensus 476 i~~--gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~--~~----~~~~~~iG~p~~~~~v~i~d-~~g~~v 546 (728)
+.. +|+.++++..+++.+.++...+.+.||+||++..++.... .. ...+.++|+|++|++++|+| ++++++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~ 409 (567)
T PRK06178 330 VRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELL 409 (567)
T ss_pred eeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcC
Confidence 654 4589999999988887764444568999998765433221 11 12346799999999999999 669999
Q ss_pred CCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHH
Q 004825 547 PQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVE 626 (728)
Q Consensus 547 p~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~e 626 (728)
+.|+. |||+|.+..+.. .|+++++.++..|. +| ||+|||+|++++||+++++||+||+||++|++|+|.|
T Consensus 410 ~~g~~--Gel~v~g~~v~~-gY~~~~~~~~~~~~-----dg--~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~e 479 (567)
T PRK06178 410 PLGAE--GEIVVRTPSLLK-GYWNKPEATAEALR-----DG--WLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSE 479 (567)
T ss_pred CCCCc--eEEEEECCcccc-cccCChhhhhhccc-----CC--ceeecceEEEecCCeEEEEecccccEEECCEEECHHH
Confidence 99986 999997665443 24566666766663 24 9999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCC
Q 004825 627 IERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTA 706 (728)
Q Consensus 627 IE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~ 706 (728)
||+++. .+|+|.+++|++.+++..| +.+++++++.+ +. ..+.+++ ++.++++|+.|++|. ++++++||+|+
T Consensus 480 iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~-~~-~~~~~~l----~~~~~~~l~~~~~p~-i~~v~~iP~t~ 550 (567)
T PRK06178 480 VEALLG-QHPAVLGSAVVGRPDPDKG-QVPVAFVQLKP-GA-DLTAAAL----QAWCRENMAVYKVPE-IRIVDALPMTA 550 (567)
T ss_pred HHHHHH-hCCCeeEEEEEcCcCcccC-cceEEEEEeCC-CC-cCCHHHH----HHHHHhcCcccCCce-EEEeccCCCCC
Confidence 999995 8999999999998887777 78999998876 43 3454444 446778899999996 88899999999
Q ss_pred CCchhHHHHHHHHHhhc
Q 004825 707 TNKVMRRVLRKQLAQLD 723 (728)
Q Consensus 707 ~GKvdR~~L~~~~~~~~ 723 (728)
+||++|++|++++++++
T Consensus 551 ~GKv~r~~l~~~~~~~~ 567 (567)
T PRK06178 551 TGKVRKQDLQALAEELK 567 (567)
T ss_pred ccceeHHHHHHHHHhhC
Confidence 99999999999998753
No 92
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.5e-62 Score=552.92 Aligned_cols=473 Identities=19% Similarity=0.219 Sum_probs=379.6
Q ss_pred hhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Q 004825 181 NCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGY 260 (728)
Q Consensus 181 ~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~ 260 (728)
..|.++++++|+++|+++.+. .+||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++|+
T Consensus 39 ~~~~~~a~~~p~~~a~~~~~~--------~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~ 110 (516)
T PRK13383 39 TLLAVTAARWPGRTAIIDDDG--------ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGA 110 (516)
T ss_pred HHHHHHHHHCCCCcEEEeCCC--------cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCe
Confidence 346677788999999998765 899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhh
Q 004825 261 IVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERV 340 (728)
Q Consensus 261 ~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (728)
+++|+++.++.+++.+++++++++++++++..... +.........++... ... ..
T Consensus 111 v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~---------~~~~~~~~~~~~~~~--------------~~~--~~ 165 (516)
T PRK13383 111 DVVPISTEFRSDALAAALRAHHISTVVADNEFAER---------IAGADDAVAVIDPAT--------------AGA--EE 165 (516)
T ss_pred EEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHH---------HHhhhcceEEeccch--------------hhh--hc
Confidence 99999999999999999999999999998754311 111111222221100 000 00
Q ss_pred hccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHH--HHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHH
Q 004825 341 RKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFK--AAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYAS 418 (728)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~--~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (728)
. ...+...++.++|+|||||||.||||+++|..... ........+++.++|+++...|++|.+++..++.+
T Consensus 166 ---~----~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~ 238 (516)
T PRK13383 166 ---S----GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLMLT 238 (516)
T ss_pred ---C----CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHHH
Confidence 0 00112245678999999999999999999984322 12222345678899999999999999999888899
Q ss_pred hhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCC--CCCCCcCeeEEEeecCCCCHHHHHHHHhccC
Q 004825 419 LLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCI--DGYDWSSIRCFGSTGEASNVDEYLWLMGRAL 496 (728)
Q Consensus 419 L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~ 496 (728)
+..|+++++.. ..++..+++.++++++|.+.++|+++..+...... ....++++|.+++||+++++++.+++.+.++
T Consensus 239 l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g 317 (516)
T PRK13383 239 IALGGTVLTHR-HFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYG 317 (516)
T ss_pred HhcCCEEEECC-CCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcC
Confidence 99999998765 35778899999999999999999999999865321 1235789999999999999999999988775
Q ss_pred CCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccc
Q 004825 497 YKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYD 576 (728)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~ 576 (728)
..+++.||+||++..+............++|+|++|++++|+|++|++++.|+. |||++.+..... +|.+...
T Consensus 318 -~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~--~Y~~~~~-- 390 (516)
T PRK13383 318 -DILYNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILDRNNRPVGPRVT--GRIFVGGELAGT--RYTDGGG-- 390 (516)
T ss_pred -chhhhcccccccccceeccccccccCCCcccCCCCCcEEEEECCCCCCCCCCCc--eEEEEecCcccc--cccCCch--
Confidence 789999999999865443322222345689999999999999999999999987 999997654433 2222211
Q ss_pred cccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEE
Q 004825 577 VYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQL 656 (728)
Q Consensus 577 ~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l 656 (728)
..+ .+| ||+|||+|++++||+++++||.||+||++|++|+|.|||.+|. .||.|.+++|++.+++..+ +.+
T Consensus 391 ~~~-----~~g--~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~-~~~~v~~~~vv~~~~~~~g-~~~ 461 (516)
T PRK13383 391 KAV-----VDG--MTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALA-AHPAVADNAVIGVPDERFG-HRL 461 (516)
T ss_pred hhe-----ecC--ceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccccccC-ceE
Confidence 111 224 9999999999999999999999999999999999999999995 9999999999999887777 889
Q ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHH
Q 004825 657 TIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLR 716 (728)
Q Consensus 657 ~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 716 (728)
.++|+.++ +. ..+..+ +++.++++++.|++|..++++++||+|++||++|++|+
T Consensus 462 ~~~v~~~~-~~-~~~~~~----l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 462 AAFVVLHP-GS-GVDAAQ----LRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred EEEEEECC-CC-CCCHHH----HHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 99999876 43 234444 55567888999999999999999999999999999985
No 93
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.5e-63 Score=573.63 Aligned_cols=525 Identities=17% Similarity=0.139 Sum_probs=383.9
Q ss_pred CCCCCCCCcchHhhhhcccccCCCCCCeEEEEecc-----------CCC--------CCCceeecHHHHHHHHHHHHHHH
Q 004825 167 GGQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDE-----------GDG--------GLPVKSMTLKELRAEVWLVAYAL 227 (728)
Q Consensus 167 ~~~w~~~~~~~~~~~~l~~~~~~~pd~~Al~~~~~-----------~~~--------~~~~~~lTY~eL~~~a~~lA~~L 227 (728)
...|+.. ....++|.++++++||++|+.+... ++. .+.++.+||+||.++++++|++|
T Consensus 62 ~~~~~~~---~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L 138 (700)
T PTZ00216 62 RNEWYYG---PNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGL 138 (700)
T ss_pred ccccCCC---CCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHH
Confidence 3456543 3467889999999999999998521 010 12457999999999999999999
Q ss_pred HHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhh
Q 004825 228 NALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDA 307 (728)
Q Consensus 228 ~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 307 (728)
+++|+++||+|+|+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|++...... .......
T Consensus 139 ~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~-----l~~~~~~ 213 (700)
T PTZ00216 139 AELGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPN-----LLRLMKS 213 (700)
T ss_pred HHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHH-----HHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999998643210 0011111
Q ss_pred --c-CCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHH
Q 004825 308 --Q-APLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKA 384 (728)
Q Consensus 308 --~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~ 384 (728)
. ...+++++....... .......+|.++...+..............++++|||+|||||||.||||+++|+|+++.
T Consensus 214 ~~~~~~~ii~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~ 292 (700)
T PTZ00216 214 GGMPNTTIIYLDSLPASVD-TEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAG 292 (700)
T ss_pred ccCCceEEEEECCCccccc-cCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHH
Confidence 1 112333322111000 001123567777665421011111123446899999999999999999999999999988
Q ss_pred HHHHHHhc-----CCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHH-------HHHHhCCcEEEec
Q 004825 385 AADAWCHM-----DIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAK-------FVQDAKVTMLGVV 452 (728)
Q Consensus 385 ~~~~~~~~-----~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~-------~i~~~~vt~l~~~ 452 (728)
+.+....+ .++++|+++++.|++|.++.......+..|+++++.+ +..+.+ .|+++++|++.++
T Consensus 293 ~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~~----~~~l~~~~~~~~~~l~~~~pT~~~~v 368 (700)
T PTZ00216 293 ILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFGS----PRTLTDTFARPHGDLTEFRPVFLIGV 368 (700)
T ss_pred HHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEECC----HHHhhhhhccccchHHHcCCcEEEec
Confidence 77665433 2478899999999999988755555677888776632 233333 6889999999999
Q ss_pred HHHHHHHHcCCCC-------------------------CCCC----------------CcCeeEEEeecCCCCHHHHHHH
Q 004825 453 PSIVRTWKSTNCI-------------------------DGYD----------------WSSIRCFGSTGEASNVDEYLWL 491 (728)
Q Consensus 453 Ps~l~~l~~~~~~-------------------------~~~~----------------l~~lr~i~~gGe~l~~~~~~~~ 491 (728)
|.+++.+.+.... .+.. -+++|.+++||+++++++.+++
T Consensus 369 P~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~ 448 (700)
T PTZ00216 369 PRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFV 448 (700)
T ss_pred hHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHH
Confidence 9999987642100 0000 1579999999999999998777
Q ss_pred HhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCC--ccCCCCCceeEEEEeccccCCCccc
Q 004825 492 MGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGC--PIPQNVPGMGELALSPLIFGASSTL 569 (728)
Q Consensus 492 ~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~--~vp~g~~giGEl~v~~~~~~~~~~~ 569 (728)
...+ + +++|.||+||+++..+.... .....+++|+|++|++++|+|+++. ..+++.. |||+|++..+.. .||
T Consensus 449 ~~~~-~-~l~~~YG~TEt~~~~~~~~~-~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~--GEL~vrG~~v~~-GY~ 522 (700)
T PTZ00216 449 NVVF-G-MVIQGWGLTETVCCGGIQRT-GDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPR--GEILLRGPFLFK-GYY 522 (700)
T ss_pred HHHh-h-hHhhccCcccccccccccCC-CCCCCCCcCCcCCCeEEEEeechhhccCCCCCCC--ceEEEcCCcccc-hhc
Confidence 6544 4 89999999999865444332 2335679999999999999998652 3344544 999997665543 357
Q ss_pred cCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeee-cCceeecHHHHHHHHhcCCCCeeee--EEEee
Q 004825 570 LNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMN-LGGIKVSSVEIERICNAVDSNVLET--AAIGV 646 (728)
Q Consensus 570 ~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~ik-i~G~ri~~~eIE~~l~~~~p~V~~~--~Vv~~ 646 (728)
++++.|++.|..+ | ||+|||+|++++||+|+|+||+||+|| ++|++|+|+|||+++. .||.|.++ +|++.
T Consensus 523 ~~pe~T~~~f~~d----G--w~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~-~~p~V~~~~~~v~~~ 595 (700)
T PTZ00216 523 KQEELTREVLDED----G--WFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYG-QNELVVPNGVCVLVH 595 (700)
T ss_pred CChhHhhhhcccc----C--CeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHh-cCcCcccceEEEEEe
Confidence 7889999988654 3 999999999999999999999999999 8999999999999995 99999973 34433
Q ss_pred cCCCCCceEEEEEEEecCC---------CCC-----CCCHHHHHHHHHHHH-----HhhCCCCcccceEEECCC------
Q 004825 647 PPPDGGPEQLTIVVVFKDS---------NYT-----PPDLNQLRMSFNSAV-----QKKLNPLFKVSHVVPLPS------ 701 (728)
Q Consensus 647 ~~~~~g~~~l~a~vv~~~~---------~~~-----~~~~~~l~~~l~~~l-----~~~Lp~~~~P~~i~~v~~------ 701 (728)
++ . ..++|+|++... +.. -....++++.+.+.+ +..|..|.+|..|.++++
T Consensus 596 ~~--~--~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~ 671 (700)
T PTZ00216 596 PA--R--SYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPEN 671 (700)
T ss_pred cC--C--ceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCC
Confidence 22 2 679999987530 110 011123344444433 246888889988888753
Q ss_pred CCCCCCCchhHHHHHHHHHh
Q 004825 702 LPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 702 lP~t~~GKvdR~~L~~~~~~ 721 (728)
=-+|+++|+.|+.+.+.|++
T Consensus 672 g~lT~t~K~~R~~i~~~y~~ 691 (700)
T PTZ00216 672 GVLTAAMKLKRRVIDERYAD 691 (700)
T ss_pred CCCChhhccchHHHHHHHHH
Confidence 34799999999999998876
No 94
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.5e-61 Score=552.26 Aligned_cols=521 Identities=19% Similarity=0.213 Sum_probs=396.3
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
....|.+.++.+|+++|+++.+. .+||+||+++++++|..|.+.|+++||+|+++++|++++++++|||+++
T Consensus 22 ~~~~~~~~~~~~p~~~a~~~~~~--------~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~ 93 (567)
T PLN02479 22 PLWFLERAAVVHPTRKSVVHGSV--------RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMA 93 (567)
T ss_pred HHHHHHHHHhhCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhC
Confidence 34557778888999999998766 8999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhh------cCCcEEEEcCCCCC---cccccCCC
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDA------QAPLAIVIPAKGSS---FSMKLRDG 329 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~---~~~~~~~~ 329 (728)
|++++|++|.++.+++.+++++++++++|+++......... ...... ....++++...... .......+
T Consensus 94 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (567)
T PLN02479 94 GAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEA--LKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKG 171 (567)
T ss_pred CcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHH--HHHHhhcccccCCCceEEEecCCcCCccccccccccC
Confidence 99999999999999999999999999999987543211000 010000 11123333211100 00011123
Q ss_pred CcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchh
Q 004825 330 DISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWM 409 (728)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 409 (728)
...|.+++..... . .........+++++++|||||||.||||+++|+++..........++++.+|++++..|++|.
T Consensus 172 ~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~ 248 (567)
T PLN02479 172 AIEYEKFLETGDP--E-FAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHC 248 (567)
T ss_pred cccHHHHHhcccc--c-cccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhh
Confidence 4456666543221 0 001112234577889999999999999999999987766555567788999999999999999
Q ss_pred hhHHHHH-HHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCC-CCCcCeeEEEeecCCCCHHH
Q 004825 410 MGPWLVY-ASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDG-YDWSSIRCFGSTGEASNVDE 487 (728)
Q Consensus 410 ~~~~~~~-~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~-~~l~~lr~i~~gGe~l~~~~ 487 (728)
.++...+ .++..|+++++. ..++..+++.++++++|++..+|+++..|........ ..+++++.++++|+++++.+
T Consensus 249 ~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~ 326 (567)
T PLN02479 249 NGWCFTWTLAALCGTNICLR--QVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSV 326 (567)
T ss_pred hhHHHHHHHHhhcCceEecc--CCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHH
Confidence 8874433 455666665543 3577889999999999999999999999987543222 25688999999999999999
Q ss_pred HHHHHhccCCCCeEecccccccccccccCCcc---------c-ccccccccCCCCCce-EEEEc-CCCCccCCCCCceeE
Q 004825 488 YLWLMGRALYKPVIEYCGGTEIGGGFITGSLL---------Q-AQSLAAFSTPAMGCK-LFILG-NDGCPIPQNVPGMGE 555 (728)
Q Consensus 488 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---------~-~~~~~~iG~p~~~~~-v~i~d-~~g~~vp~g~~giGE 555 (728)
.+++.+. +.++++.||+||+++.++..... . .......|.|.+|+. ++|+| +.++++|.+...+||
T Consensus 327 ~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GE 404 (567)
T PLN02479 327 LFAMSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGE 404 (567)
T ss_pred HHHHHhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceE
Confidence 8888754 57899999999986433321100 0 011135688888875 89999 468888765212499
Q ss_pred EEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCC
Q 004825 556 LALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVD 635 (728)
Q Consensus 556 l~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~ 635 (728)
|++.+..+.. .|+++++.+++.|.. | ||+|||+|++++||+++|+||.||+||++|++|+|.|||.+|. .|
T Consensus 405 l~v~g~~~~~-GY~~~~~~t~~~~~~-----g--~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~-~~ 475 (567)
T PLN02479 405 IVMRGNMVMK-GYLKNPKANEEAFAN-----G--WFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVY-TH 475 (567)
T ss_pred EEEeccchhh-hhhcCcccccchhcC-----C--ceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHH-hC
Confidence 9997655433 346677888877742 3 9999999999999999999999999999999999999999995 89
Q ss_pred CCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHH
Q 004825 636 SNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVL 715 (728)
Q Consensus 636 p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L 715 (728)
|.|.+++|++.+++..+ +.+++++++.. +....+...+.+.|+++++++||.|++|..+++ ++||+|++||++|+.|
T Consensus 476 ~~v~~~~v~~~~~~~~~-~~~~~~v~~~~-~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L 552 (567)
T PLN02479 476 PAVLEASVVARPDERWG-ESPCAFVTLKP-GVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQKHVL 552 (567)
T ss_pred cccceeeEEeccchhcC-ceeEEEEEecC-cccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCeeHHHH
Confidence 99999999998877666 78999999876 331122245566788889999999999988776 6799999999999999
Q ss_pred HHHHHh--hcccCCC
Q 004825 716 RKQLAQ--LDQNSKL 728 (728)
Q Consensus 716 ~~~~~~--~~~~~~l 728 (728)
++.+.. +..+|||
T Consensus 553 ~~~~~~~~~~~~~~~ 567 (567)
T PLN02479 553 RAKAKEMGPVKKSRL 567 (567)
T ss_pred HHHHHhhCCcccccC
Confidence 998776 6677765
No 95
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=8.8e-62 Score=536.56 Aligned_cols=427 Identities=17% Similarity=0.153 Sum_probs=347.5
Q ss_pred eecHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEE
Q 004825 210 SMTLKELRAEVWLVAYALNALGL-DKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFT 288 (728)
Q Consensus 210 ~lTY~eL~~~a~~lA~~L~~~Gv-~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~ 288 (728)
-+.|+||+++++++|++|++.|+ ++|++|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 47899999999999999999998 57999999999999999999999999999999999999999999999999999998
Q ss_pred ecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCC
Q 004825 289 QDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTT 368 (728)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGST 368 (728)
++..... ... .. . .......++++++++||||||
T Consensus 99 ~~~~~~~------------------~~~-------------~~------------~---~~~~~~~~~~~~~i~~TSGTT 132 (452)
T PRK07445 99 LDQLKLS------------------HPP-------------PL------------P---SQGILPNLETGWIMIPTGGSS 132 (452)
T ss_pred cCccccc------------------cCC-------------CC------------C---ccccCCCCCCcEEEEeCCCCC
Confidence 7642100 000 00 0 000123468999999999999
Q ss_pred CCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcE
Q 004825 369 GEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTM 448 (728)
Q Consensus 369 G~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~ 448 (728)
|.||||+++|++++..+.+....+++.+ ++.++..|++|.+++..++.+|+.|+++++.+.. ..........++++|+
T Consensus 133 G~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~-~~~~~~~~~~~~~~t~ 210 (452)
T PRK07445 133 GQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYK-RLKSGQELPPNPSDFF 210 (452)
T ss_pred CCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChH-hccchhhhhhhcCceE
Confidence 9999999999999888887777777765 4678889999999998888999999999998632 1222234456789999
Q ss_pred EEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCccc-ccccccc
Q 004825 449 LGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQ-AQSLAAF 527 (728)
Q Consensus 449 l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~-~~~~~~i 527 (728)
+.++|++++.+++. ....+++||.+++||+++++++.+++.. . ++++++.||+||++..++...+.. .....++
T Consensus 211 ~~~vP~~l~~l~~~---~~~~l~~l~~i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~ 285 (452)
T PRK07445 211 LSLVPTQLQRLLQL---RPQWLAQFRTILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATLKPDDFLAGNNSS 285 (452)
T ss_pred EEehHHHHHHHHhh---ChhhhhcceEEEECCccCCHHHHHHHHh-c-CCeEecCcchhhhcccccccCchhhccCCCcC
Confidence 99999999999863 2334789999999999999999887764 3 588999999999876544332221 1234679
Q ss_pred cCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEE
Q 004825 528 STPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRA 607 (728)
Q Consensus 528 G~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~ 607 (728)
|+|++|++++|+ .|+. |||+|.+..+..+ |++. +. ...+||+|||+|++++||+++|
T Consensus 286 G~~~p~~~v~i~--------~g~~--Gel~v~g~~~~~g--Y~~~----------~~-~~~g~~~TGDl~~~d~dG~l~~ 342 (452)
T PRK07445 286 GQVLPHAQITIP--------ANQT--GNITIQAQSLALG--YYPQ----------IL-DSQGIFETDDLGYLDAQGYLHI 342 (452)
T ss_pred CccCCCCeEEEc--------CCCc--ceEEEeCCccchh--hcCC----------cc-CCCCEEECCCEEEEcCCCCEEE
Confidence 999999999998 3444 9999966543322 2221 11 1234999999999999999999
Q ss_pred EcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhC
Q 004825 608 HGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKL 687 (728)
Q Consensus 608 ~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~L 687 (728)
.||.||+||++|+||+|.|||++|. .||+|.+|+|++.+++..| +.++|+++..+ +. .+.++ ++++++++|
T Consensus 343 ~GR~dd~I~~~G~~V~p~eIE~~l~-~~p~V~~a~V~g~~~~~~g-~~~~a~vv~~~-~~--~~~~~----l~~~~~~~L 413 (452)
T PRK07445 343 LGRNSQKIITGGENVYPAEVEAAIL-ATGLVQDVCVLGLPDPHWG-EVVTAIYVPKD-PS--ISLEE----LKTAIKDQL 413 (452)
T ss_pred EeecCCEEEECCEEECHHHHHHHHH-hCCCcceEEEEeccCcCCC-cEEEEEEEeCC-CC--CCHHH----HHHHHHHhC
Confidence 9999999999999999999999995 8999999999999988777 88999998876 32 34444 455688899
Q ss_pred CCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 688 NPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 688 p~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
+.|++|..++++++||+|++||++|++|++++++
T Consensus 414 ~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 447 (452)
T PRK07445 414 SPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQ 447 (452)
T ss_pred CcccCCeEEEEecCCCCCCCcccCHHHHHHHHHH
Confidence 9999999999999999999999999999999876
No 96
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=5.1e-62 Score=565.16 Aligned_cols=524 Identities=16% Similarity=0.122 Sum_probs=388.5
Q ss_pred hHhhhhcccccCCCCCCeEEEEec---------cCC------CCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 004825 177 NPAKNCLSVNSKRSLDDIVIRWCD---------EGD------GGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAID 241 (728)
Q Consensus 177 ~~~~~~l~~~~~~~pd~~Al~~~~---------~~~------~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~ 241 (728)
++..++|.+.++++||++|+.+.. .++ ..+.++.+||+||.++++++|++|.++|+++||+|+|+
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~ 137 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIF 137 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 345678899999999999995421 000 12456679999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCC--cEEEEcCC
Q 004825 242 MPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAP--LAIVIPAK 318 (728)
Q Consensus 242 ~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~--~~~~i~~~ 318 (728)
++|+++|++++|||+++|+++||+++.++.+++.++|++++++++|++..... .. ......+. .++.++..
T Consensus 138 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~------~l~~~~~~~~~l~~ii~~~~~ 211 (696)
T PLN02387 138 ADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLK------KLIDISSQLETVKRVIYMDDE 211 (696)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHH------HHHHHhhccCCceEEEEECCC
Confidence 99999999999999999999999999999999999999999999999864321 11 22222221 23333321
Q ss_pred CCCccc----ccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhc-C
Q 004825 319 GSSFSM----KLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHM-D 393 (728)
Q Consensus 319 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~-~ 393 (728)
...... ........|.++...+... ........++++++|+|||||||.||||+++|+|++..+......+ +
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~ 288 (696)
T PLN02387 212 GVDSDSSLSGSSNWTVSSFSEVEKLGKEN---PVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPK 288 (696)
T ss_pred CchhhhhhhccCCcEEEEHHHHHHhhccC---CCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCC
Confidence 110000 0001123466665543221 1112234679999999999999999999999999998877665543 6
Q ss_pred CCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCC-------CcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCC
Q 004825 394 IRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSP-------LGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCID 466 (728)
Q Consensus 394 ~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~-------~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~ 466 (728)
++++|++++++|++|.++....+..+..|+++.+..... .+..++..++++++|++.++|+++..+.+.....
T Consensus 289 ~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~ 368 (696)
T PLN02387 289 LGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKK 368 (696)
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHH
Confidence 889999999999999999865556678888876643211 1234567899999999999999999886431000
Q ss_pred -------------------------------C--C-------------CC-cCeeEEEeecCCCCHHHHHHHHhccCCCC
Q 004825 467 -------------------------------G--Y-------------DW-SSIRCFGSTGEASNVDEYLWLMGRALYKP 499 (728)
Q Consensus 467 -------------------------------~--~-------------~l-~~lr~i~~gGe~l~~~~~~~~~~~~~~~~ 499 (728)
. . .+ +++|.+++||+++++++.+++...+ +++
T Consensus 369 ~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~ 447 (696)
T PLN02387 369 VDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAP 447 (696)
T ss_pred HhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCC
Confidence 0 0 01 5899999999999999987776555 489
Q ss_pred eEecccccccccccccCCcccccccccccCCCCCceEEEEc-CCCCcc---CCCCCceeEEEEeccccCCCccccCcccc
Q 004825 500 VIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILG-NDGCPI---PQNVPGMGELALSPLIFGASSTLLNANHY 575 (728)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d-~~g~~v---p~g~~giGEl~v~~~~~~~~~~~~~~~~~ 575 (728)
+++.||+||+++..+.... .....+++|+|+++++++|+| +++... .++. .|||+|.++.+.. .||++++.|
T Consensus 448 v~~~YG~TEt~~~~~~~~~-~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p--~GEi~vrGp~v~~-GY~~~pe~T 523 (696)
T PLN02387 448 IGQGYGLTETCAGATFSEW-DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMP--RGEIVIGGPSVTL-GYFKNQEKT 523 (696)
T ss_pred eeEeechhhcccceeecCc-ccCCCCccCCCCCceEEEEeeccccCcccCCCCCC--CceEEeccCcccc-hhcCCHHHH
Confidence 9999999999866554433 233567899999999999998 444322 2222 3999996655433 356788889
Q ss_pred ccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeec-CceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCce
Q 004825 576 DVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNL-GGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPE 654 (728)
Q Consensus 576 ~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki-~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~ 654 (728)
++.|..++ +|.+||+|||+|++++||+|+++||+||+||+ +|++|+|+|||++|. .||.|.+|+|++.+. . .
T Consensus 524 ~~~f~~d~--~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~-~~p~V~~~~V~g~~~--~--~ 596 (696)
T PLN02387 524 DEVYKVDE--RGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALS-VSPYVDNIMVHADPF--H--S 596 (696)
T ss_pred hhhhcccc--CCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHh-cCCCeeEEEEEecCC--c--c
Confidence 98885433 35679999999999999999999999999998 699999999999995 999999999998542 1 5
Q ss_pred EEEEEEEecCC---------CCCCC------CHHHHHHHHHHHH-----HhhCCCCcccceEEECCCCC------CCCCC
Q 004825 655 QLTIVVVFKDS---------NYTPP------DLNQLRMSFNSAV-----QKKLNPLFKVSHVVPLPSLP------RTATN 708 (728)
Q Consensus 655 ~l~a~vv~~~~---------~~~~~------~~~~l~~~l~~~l-----~~~Lp~~~~P~~i~~v~~lP------~t~~G 708 (728)
.++|+|++... +.... ...++++.+.+.+ +.+|+.|.+|..|.++++-. +|++.
T Consensus 597 ~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t~ 676 (696)
T PLN02387 597 YCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAAL 676 (696)
T ss_pred eEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChhh
Confidence 78999987541 11000 1123344443333 34699999999998887633 78888
Q ss_pred chhHHHHHHHHHh
Q 004825 709 KVMRRVLRKQLAQ 721 (728)
Q Consensus 709 KvdR~~L~~~~~~ 721 (728)
|+.|+.+.+.|++
T Consensus 677 K~~R~~i~~~y~~ 689 (696)
T PLN02387 677 KLKREQIRKKFKD 689 (696)
T ss_pred hhhhHHHHHHHHH
Confidence 9999999999986
No 97
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-61 Score=558.18 Aligned_cols=517 Identities=15% Similarity=0.111 Sum_probs=382.8
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEEcC
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNAL---GLDKG-----------SAIAIDMP 243 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~---Gv~~g-----------d~Vai~~~ 243 (728)
...++|.++++++|+++|+++... ...++.+||+||.++++++|++|.+. |+++| |+|+|+++
T Consensus 62 ~l~~~l~~~~~~~p~~~Al~~~~~---g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~ 138 (746)
T PTZ00342 62 HIMKLLLEKYKLNNNKIAIVEHSC---GEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGS 138 (746)
T ss_pred hHHHHHHHHHhhcCCceeEeccCC---CCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcC
Confidence 455778889999999999986422 11246899999999999999999974 99999 99999999
Q ss_pred CCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCC--cEEEEcCCCC
Q 004825 244 MNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAP--LAIVIPAKGS 320 (728)
Q Consensus 244 ~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~--~~~~i~~~~~ 320 (728)
|+++|+++++||+++|++.||+++.++.+++.++|++++++++|++.... +.. ......+. .+++++....
T Consensus 139 N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~l~~ii~~~~~~~ 212 (746)
T PTZ00342 139 NSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLV------EGLLERKNELPHLKKLIILDTLIK 212 (746)
T ss_pred CCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHH------HHHHHhhccCCCceEEEEECCCCc
Confidence 99999999999999999999999999999999999999999999975432 111 12222222 3334432110
Q ss_pred Cc-----------------ccccC--------------------------CCCcCHHHHHHhhhc-------------cc
Q 004825 321 SF-----------------SMKLR--------------------------DGDISWLDFLERVRK-------------LK 344 (728)
Q Consensus 321 ~~-----------------~~~~~--------------------------~~~~~~~~~~~~~~~-------------~~ 344 (728)
.. ..... .....|.++...... ..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 292 (746)
T PTZ00342 213 SKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNK 292 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhc
Confidence 00 00000 000112222211100 00
Q ss_pred cCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhc--CCCCCCEEEecCCcchhhhHHHHHHHhhhC
Q 004825 345 ENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHM--DIRKADIVAWPTNLGWMMGPWLVYASLLNG 422 (728)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (728)
..........++++|+|+|||||||.||||++||+|+++.+....... .....|++++++|++|.++....+.+++.|
T Consensus 293 ~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G 372 (746)
T PTZ00342 293 TTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLG 372 (746)
T ss_pred ccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcC
Confidence 011122345689999999999999999999999999998876554321 233568999999999999987777889999
Q ss_pred cEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcC--------CCCCC---------------------------
Q 004825 423 ASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKST--------NCIDG--------------------------- 467 (728)
Q Consensus 423 ~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~--------~~~~~--------------------------- 467 (728)
+++++.++ ++..+++.|+++++|+++++|.++..+.+. .....
T Consensus 373 ~~i~~~~~--~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 450 (746)
T PTZ00342 373 GTINIWSK--DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITH 450 (746)
T ss_pred CEEEEeCC--CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHH
Confidence 99999864 678899999999999999999999998652 10000
Q ss_pred -------CCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCC-CCceEEEE
Q 004825 468 -------YDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPA-MGCKLFIL 539 (728)
Q Consensus 468 -------~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~v~i~ 539 (728)
.-.++||.+++||+++++++.+++...++ ++++++||+||+++..+.... .....+++|+|+ |+++++|+
T Consensus 451 v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g-~~i~~gYGlTEt~~~~~~~~~-~~~~~gsvG~p~~pg~e~ki~ 528 (746)
T PTZ00342 451 ISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLN-VNYYQGYGLTETTGPIFVQHA-DDNNTESIGGPISPNTKYKVR 528 (746)
T ss_pred HHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcC-CCEEEeeccCcccceeeeccC-CCCCcccccCcCCCcEEEEEe
Confidence 00158999999999999999999987664 899999999999865554433 234568999998 99999999
Q ss_pred c-CCCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeec-
Q 004825 540 G-NDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNL- 617 (728)
Q Consensus 540 d-~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki- 617 (728)
| +++...+.+.. |||+|.++.+.. .|+++++.|++.|..+ | ||+|||+|++++||+|+|+||+||+||+
T Consensus 529 d~~~~~~~~~~~~--GEl~vrGp~v~~-GY~~~pe~T~~~f~~d----G--W~~TGDig~~d~dG~l~i~gR~kdlIkls 599 (746)
T PTZ00342 529 TWETYKATDTLPK--GELLIKSDSIFS-GYFLEKEQTKNAFTED----G--YFKTGDIVQINKNGSLTFLDRSKGLVKLS 599 (746)
T ss_pred cccccccCCCCCc--eEEEEecCcccc-cccCChhhhhhhcCcC----C--cccCCcEEEECCCCeEEEEccCCCeEEeC
Confidence 8 43444444433 999996654432 2567889999988643 3 9999999999999999999999999995
Q ss_pred CceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCC---------------CCCCCCH----------
Q 004825 618 GGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDS---------------NYTPPDL---------- 672 (728)
Q Consensus 618 ~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~---------------~~~~~~~---------- 672 (728)
+|++|+|.+||++|. .||.|.+|+|++... . ..++|+|++... +....+.
T Consensus 600 ~Ge~I~p~eIE~~l~-~~p~V~~~~VvG~~~--~--~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~ 674 (746)
T PTZ00342 600 QGEYIETDMLNNLYS-QISFINFCVVYGDDS--M--DGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETIN 674 (746)
T ss_pred CCEEEchHHHHHHHh-cCCCccEEEEEccCC--c--cccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhc
Confidence 799999999999995 999999999998421 1 468999987530 1100011
Q ss_pred -HHHHHHHHHHHH-----hhCCCCcccceEEECC-CCC----CCCCCchhHHHHHHHHHh
Q 004825 673 -NQLRMSFNSAVQ-----KKLNPLFKVSHVVPLP-SLP----RTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 673 -~~l~~~l~~~l~-----~~Lp~~~~P~~i~~v~-~lP----~t~~GKvdR~~L~~~~~~ 721 (728)
.++++.+.+.+. ..|+.|.++..|..++ .+. +||+.|+.|+.+.+.++.
T Consensus 675 ~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~ 734 (746)
T PTZ00342 675 NNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAF 734 (746)
T ss_pred cHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHH
Confidence 123343443332 3699999998888775 332 999999999999988874
No 98
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-61 Score=546.00 Aligned_cols=497 Identities=20% Similarity=0.197 Sum_probs=392.8
Q ss_pred ccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEE
Q 004825 184 SVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVV 263 (728)
Q Consensus 184 ~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~v 263 (728)
..+++++|+++|+++...+ +.+||.||.++++++|++|++.|+++|++|++++++++++++++|||+++|++++
T Consensus 4 ~~~a~~~p~~~a~~~~~~~------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~ 77 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTG------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYT 77 (511)
T ss_pred hhhHhhCCCceEEEecCCC------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEe
Confidence 3466789999999885331 2899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCC--cEEEEcCCCCCcccccCCCCcCHHHHHHhhh
Q 004825 264 SIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAP--LAIVIPAKGSSFSMKLRDGDISWLDFLERVR 341 (728)
Q Consensus 264 pl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (728)
|+++.++.+++.++++++++++++++....... ......... ..+.+..... ......+.+......
T Consensus 78 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 146 (511)
T PRK13391 78 CVNSHLTPAEAAYIVDDSGARALITSAAKLDVA-----RALLKQCPGVRHRLVLDGDGE------LEGFVGYAEAVAGLP 146 (511)
T ss_pred ccccccCHHHHHHHHhccCCcEEEEchhhHHHH-----HHHHhcCCCceEEEEecCCCC------CcccccHHHHhcCCC
Confidence 999999999999999999999999987532110 011111111 1122211110 011122332221110
Q ss_pred ccccCccccccCCCCCceEEEecCCCCCCCceEEec--CcHHHH---HHHHHHHhcCCCCCCEEEecCCcchhhhHHHHH
Q 004825 342 KLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWT--NATPFK---AAADAWCHMDIRKADIVAWPTNLGWMMGPWLVY 416 (728)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~s--h~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 416 (728)
.......++.++++|||||||.||||+++ |.++.. ........+++..++++++..|++|..++...+
T Consensus 147 -------~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~ 219 (511)
T PRK13391 147 -------ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVM 219 (511)
T ss_pred -------CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHH
Confidence 01112335678999999999999999964 666532 233344567788999999999999999887778
Q ss_pred HHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC--CCCCCCcCeeEEEeecCCCCHHHHHHHHhc
Q 004825 417 ASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC--IDGYDWSSIRCFGSTGEASNVDEYLWLMGR 494 (728)
Q Consensus 417 ~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~ 494 (728)
.++..|+++++.+. .++..+++.++++++|++.++|+++..+++... ....+++++|.+++||+++++++.+++.+.
T Consensus 220 ~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~ 298 (511)
T PRK13391 220 LVIRLGGTVIVMEH-FDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDW 298 (511)
T ss_pred HHHHcCceEEECCC-CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHH
Confidence 89999999999864 577899999999999999999999998876532 223457899999999999999999988876
Q ss_pred cCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccc
Q 004825 495 ALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANH 574 (728)
Q Consensus 495 ~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~ 574 (728)
++ ..+++.||+||++.+............+++|+|+++ .++|+|++|++++.|+. |||++.+... . .|+.+++.
T Consensus 299 ~g-~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g~~--Gel~~~g~~~-~-gy~~~~~~ 372 (511)
T PRK13391 299 WG-PIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILDDDGAELPPGEP--GTIWFEGGRP-F-EYLNDPAK 372 (511)
T ss_pred cC-CceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEECCCCCCCCCCCc--eEEEEecCcc-e-EEcCChhH
Confidence 64 789999999999865443222222345789999999 69999999999999987 9999976632 2 35667777
Q ss_pred cccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCce
Q 004825 575 YDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPE 654 (728)
Q Consensus 575 ~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~ 654 (728)
++..|..+ .+||+|||+|++++||.++++||.||++|++|++|++.|||++|. .||.|.+|+|++.+++..| +
T Consensus 373 ~~~~~~~~-----~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~-~~~~v~~~~v~~~~~~~~g-~ 445 (511)
T PRK13391 373 TAEARHPD-----GTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLI-THPKVADAAVFGVPNEDLG-E 445 (511)
T ss_pred hHHhhccC-----CCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHH-hCCCcceEEEEecCCcccC-c
Confidence 77766543 249999999999999999999999999999999999999999996 8999999999999887777 7
Q ss_pred EEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 655 QLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
.+++++++.. +. .....+.+.++++++++||.|++|..+..++++|+|++||++|+.|++.+..
T Consensus 446 ~~~~~~~~~~-~~--~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 446 EVKAVVQPVD-GV--DPGPALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred eeEEEEEECC-CC--CcccchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 8889988765 33 1223345677778999999999999999999999999999999999998754
No 99
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5e-61 Score=547.90 Aligned_cols=507 Identities=21% Similarity=0.228 Sum_probs=395.1
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNA-LGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
....|+++++++|+++|+++.+. ++||.||.++++++|.+|++ .|+++|++|+|+++|++++++++|||++
T Consensus 25 l~~~l~~~a~~~p~~~a~~~~~~--------~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 96 (560)
T PRK08974 25 LVDMFEQAVARYADQPAFINMGE--------VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILR 96 (560)
T ss_pred HHHHHHHHHHhCCCCceEEECCc--------cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 44667888899999999998765 99999999999999999985 8999999999999999999999999999
Q ss_pred cCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCccc-------------
Q 004825 258 AGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSM------------- 324 (728)
Q Consensus 258 aG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------- 324 (728)
+|++++|++|.++.+++.+++++++++++++++....... .+........+++.........
T Consensus 97 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (560)
T PRK08974 97 AGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLE-----KVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYI 171 (560)
T ss_pred cCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHH-----HHhhhcCcceEEEecccccccccccccccchhhhc
Confidence 9999999999999999999999999999999864321100 1111111111111110000000
Q ss_pred ------ccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcC---CC
Q 004825 325 ------KLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMD---IR 395 (728)
Q Consensus 325 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~---~~ 395 (728)
........+.+....... .........++++++|+|||||||.||||+++|+++...+......+. ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~ 248 (560)
T PRK08974 172 KRLVPKYHLPDAISFRSALHKGRR---MQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHP 248 (560)
T ss_pred ccccccccCCCcccHHHHhhccCC---CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCC
Confidence 000011122222211110 111122356789999999999999999999999999876654433332 34
Q ss_pred CCCEEEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCee
Q 004825 396 KADIVAWPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIR 474 (728)
Q Consensus 396 ~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr 474 (728)
.++.++...|++|.++. ...+.++..|+++++.....++..+++.++++++|++..+|++++.|.........+++++|
T Consensus 249 ~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr 328 (560)
T PRK08974 249 GKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLK 328 (560)
T ss_pred CccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCcccee
Confidence 45678888898888876 45677888999988876545677899999999999999999999999876554556678999
Q ss_pred EEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCcee
Q 004825 475 CFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMG 554 (728)
Q Consensus 475 ~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giG 554 (728)
.+++||+++++.+.+++.+.+ ++++++.||+||++..++...........++|.|++|+.++|+|++++++|.|+. |
T Consensus 329 ~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--G 405 (560)
T PRK08974 329 LSVGGGMAVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEIKLVDDDGNEVPPGEP--G 405 (560)
T ss_pred EEEecCccCCHHHHHHHHHHh-CCcEEeeecccccCceeeccCCCCcccCCccccCcCCCEEEEECCCCCCCCCCCc--e
Confidence 999999999999988887765 5899999999999876554443333345789999999999999999999999986 9
Q ss_pred EEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcC
Q 004825 555 ELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAV 634 (728)
Q Consensus 555 El~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~ 634 (728)
||+|.+..+..+ |+++++.++..|. +| ||+|||+|+++++|.++++||.||+|+++|.+|+|.+||++|. .
T Consensus 406 el~v~g~~~~~g-y~~~~~~~~~~~~-----~g--~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~-~ 476 (560)
T PRK08974 406 ELWVKGPQVMLG-YWQRPEATDEVIK-----DG--WLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVM-L 476 (560)
T ss_pred EEEEecCCcchh-hcCChhhhhhhhh-----cC--CcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHH-h
Confidence 999976655433 4556677776662 23 9999999999999999999999999999999999999999995 9
Q ss_pred CCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHH
Q 004825 635 DSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRV 714 (728)
Q Consensus 635 ~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~ 714 (728)
||+|.+++|++.+++..+ +.++++++... . ..+.+ .++++++++|+.|++|..+.++++||+|++||++|++
T Consensus 477 ~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~-~--~~~~~----~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~ 548 (560)
T PRK08974 477 HPKVLEVAAVGVPSEVSG-EAVKIFVVKKD-P--SLTEE----ELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRE 548 (560)
T ss_pred CCCeeEEEEEeeecCCcc-eEEEEEEECCC-C--CCCHH----HHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHH
Confidence 999999999999887777 77777776543 2 23333 4555688899999999999999999999999999999
Q ss_pred HHHHHHh
Q 004825 715 LRKQLAQ 721 (728)
Q Consensus 715 L~~~~~~ 721 (728)
|++...+
T Consensus 549 l~~~~~~ 555 (560)
T PRK08974 549 LRDEARA 555 (560)
T ss_pred HHHHHHh
Confidence 9988765
No 100
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=7.7e-61 Score=540.21 Aligned_cols=487 Identities=21% Similarity=0.211 Sum_probs=383.6
Q ss_pred eEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHH
Q 004825 194 IVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLE 273 (728)
Q Consensus 194 ~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~ 273 (728)
.|++..++ .+||.||.++++++|++|.+.|+++|++|+++++|++++++++|||+++|++++|++|.++.++
T Consensus 3 ~~~~~~~~--------~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 74 (509)
T PRK12406 3 ATIISGDR--------RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEE 74 (509)
T ss_pred eEEEECCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHH
Confidence 46666555 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCc--EEEEcCCCC---C----cc-cccCCCCcCHHHHHHhhhcc
Q 004825 274 ISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPL--AIVIPAKGS---S----FS-MKLRDGDISWLDFLERVRKL 343 (728)
Q Consensus 274 l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~---~----~~-~~~~~~~~~~~~~~~~~~~~ 343 (728)
+.++++++++++++++...... +.+..... .+.+..... . .. .........|.+......
T Consensus 75 ~~~~l~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 144 (509)
T PRK12406 75 IAYILEDSGARVLIAHADLLHG--------LASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE-- 144 (509)
T ss_pred HHHHHhccCCcEEEEccchhhh--------hhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccC--
Confidence 9999999999999998754321 11111111 111110000 0 00 001122344554432211
Q ss_pred ccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHH---HHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhh
Q 004825 344 KENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKA---AADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLL 420 (728)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~ 420 (728)
......++++++++|||||||.||||+++|.+..+. .......+++.++++++...|++|..+....+.++.
T Consensus 145 -----~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~ 219 (509)
T PRK12406 145 -----PYDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGR 219 (509)
T ss_pred -----ccCCCCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHh
Confidence 112335689999999999999999999987764433 333345678899999999999999988766667889
Q ss_pred hCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC--CCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCC
Q 004825 421 NGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC--IDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYK 498 (728)
Q Consensus 421 ~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (728)
.|+++++.+. .++..+++.++++++|++.++|+++..|+.... ....+++++|.+++||+++++++.+++.+.++ +
T Consensus 220 ~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~-~ 297 (509)
T PRK12406 220 LGGVLVLQPR-FDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWG-P 297 (509)
T ss_pred hheEEEEccC-CCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcC-C
Confidence 9999988764 577889999999999999999999999987543 23456789999999999999999999887664 7
Q ss_pred CeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccc
Q 004825 499 PVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVY 578 (728)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~ 578 (728)
.+++.||+||++.+.+.........++++|+|++++.++|+|+++++++.|.. |||++.+......+|+.+++.++..
T Consensus 298 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~~~y~~~~~~~~~~ 375 (509)
T PRK12406 298 VIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVDEDGRPLPQGEI--GEIYSRIAGNPDFTYHNKPEKRAEI 375 (509)
T ss_pred cEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEECCCCCCCCCCCc--eEEEEECCccccccccCCchhcccc
Confidence 89999999999875543332222345789999999999999999999999987 9999966544322344555555544
Q ss_pred cccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEE
Q 004825 579 FSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTI 658 (728)
Q Consensus 579 f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a 658 (728)
+. ..||+|||+|++++||.++++||.||+||++|++|++.|||++|. .+|+|.+++|++.++...+ +.+++
T Consensus 376 ~~-------~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~ 446 (509)
T PRK12406 376 DR-------GGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLH-AVPGVHDCAVFGIPDAEFG-EALMA 446 (509)
T ss_pred cC-------CCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeeeccccC-ceeEE
Confidence 32 239999999999999999999999999999999999999999996 8999999999999887666 78899
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhh
Q 004825 659 VVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 659 ~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 722 (728)
++++.+ +. ..+.+++ ++.+++.|++|++|..++++++||+|++||++|++|++.+...
T Consensus 447 ~v~~~~-~~-~~~~~~l----~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~ 504 (509)
T PRK12406 447 VVEPQP-GA-TLDEADI----RAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWAN 504 (509)
T ss_pred EEEECC-CC-CCCHHHH----HHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhh
Confidence 998876 33 2344444 4467888999999999999999999999999999999887653
No 101
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.9e-61 Score=553.69 Aligned_cols=521 Identities=20% Similarity=0.179 Sum_probs=386.8
Q ss_pred cchHhhhhcccccCCCCCCeEEEEec-cCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Q 004825 175 FVNPAKNCLSVNSKRSLDDIVIRWCD-EGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYL 253 (728)
Q Consensus 175 ~~~~~~~~l~~~~~~~pd~~Al~~~~-~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~l 253 (728)
..++..++|.+.++++|+++|+.+.. ..+..+.+..+||+||.++++++|++|.+.|+++||+|+|+++|+++|++++|
T Consensus 40 ~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~l 119 (660)
T PLN02430 40 DITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAME 119 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 44567788988999999999997643 11122345568999999999999999999999999999999999999999999
Q ss_pred HHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcC--CcEEEEcCCCCCccc---ccC
Q 004825 254 AIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQA--PLAIVIPAKGSSFSM---KLR 327 (728)
Q Consensus 254 A~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~--~~~~~i~~~~~~~~~---~~~ 327 (728)
||+++|+++||+++.++++++.+++++++++++|+++.... ... ......+ ..++.+......... ...
T Consensus 120 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~ 194 (660)
T PLN02430 120 ACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIK-----ELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIG 194 (660)
T ss_pred HHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHH-----HHHhhhcccCCCceEEEEECCCChHHhhhhhcCC
Confidence 99999999999999999999999999999999999764210 000 0001111 122333211100000 000
Q ss_pred CCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHh-----cCCCCCCEEEe
Q 004825 328 DGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCH-----MDIRKADIVAW 402 (728)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~-----~~~~~~d~~l~ 402 (728)
....+|.++...+... ........++++++|+|||||||.||||+++|+|++..+...... .+++++|++++
T Consensus 195 ~~~~~~~~~~~~~~~~---~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls 271 (660)
T PLN02430 195 VKTYSWIDFLHMGKEN---PSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLS 271 (660)
T ss_pred cEEEEHHHHHHhhccC---CCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEE
Confidence 1124577776544321 111223467999999999999999999999999998877654322 25778999999
Q ss_pred cCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC------------------
Q 004825 403 PTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC------------------ 464 (728)
Q Consensus 403 ~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~------------------ 464 (728)
+.|++|.++....+.++..|++++++.+ ++..+++.|++.++|++.++|.+++.+.+...
T Consensus 272 ~lPl~H~~~~~~~~~~l~~G~~i~~~~~--~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 349 (660)
T PLN02430 272 FLPLAHILDRMIEEYFFRKGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALY 349 (660)
T ss_pred eCcHHHHHHHHHHHHHHHcCCEEEEeCC--ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 9999999988655677899999988764 45779999999999999999999988764200
Q ss_pred -------------CCCC---C----------C-cCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCC
Q 004825 465 -------------IDGY---D----------W-SSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGS 517 (728)
Q Consensus 465 -------------~~~~---~----------l-~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 517 (728)
.... + + +++|.+++||+++++++.+++ +.++.+.+++.||+||+++.++...
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~-~~~~~~~i~~~YG~TE~~~~~~~~~ 428 (660)
T PLN02430 350 KYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFL-RVTSCAFVVQGYGLTETLGPTTLGF 428 (660)
T ss_pred HHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHH-HHhcCCCeeeecchhhhhhceEeec
Confidence 0000 0 1 579999999999999986555 4555578999999999987655444
Q ss_pred cccccccccccCCCCCceEEEEc--CCC-CccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeC
Q 004825 518 LLQAQSLAAFSTPAMGCKLFILG--NDG-CPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHG 594 (728)
Q Consensus 518 ~~~~~~~~~iG~p~~~~~v~i~d--~~g-~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TG 594 (728)
+......+++|+|.++++++|.| +.| .+++.+.. |||+|.++.+.. .|+++++.|++.|. +| ||+||
T Consensus 429 ~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~--GEi~vrg~~v~~-GY~~~~e~t~~~~~-----dG--w~~TG 498 (660)
T PLN02430 429 PDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPR--GEICVRGKCLFS-GYYKNPELTEEVMK-----DG--WFHTG 498 (660)
T ss_pred cccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCc--ceEEecCCCccc-cccCChHHhhhhhh-----cc--ceecc
Confidence 33333468999999999999986 333 44555544 999996654433 25678888888773 24 99999
Q ss_pred ceEEEecCceEEEEcccCCeeec-CceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCC--------
Q 004825 595 DVFERTSGGYYRAHGRADDTMNL-GGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDS-------- 665 (728)
Q Consensus 595 Dl~~~~~dG~l~~~GR~d~~iki-~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~-------- 665 (728)
|+|++++||+|+++||+||+||+ +|++|+|++||++|. .||.|.+|+|++.. .+ +.++|+|++...
T Consensus 499 Dig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~-~~p~V~~~~V~G~~---~~-~~~~A~vv~~~~~~~~~~~~ 573 (660)
T PLN02430 499 DIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYG-QNPIVEDIWVYGDS---FK-SMLVAVVVPNEENTNKWAKD 573 (660)
T ss_pred ceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHh-cCCCeeEEEEEecC---Cc-ceEEEEEEcCHHHHHHHHHh
Confidence 99999999999999999999997 699999999999995 99999999999832 23 689999997641
Q ss_pred -CCCC-----CCHHHHHHHHHHHHH-----hhCCCCcccceEEECCC-C-----CCCCCCchhHHHHHHHHHh
Q 004825 666 -NYTP-----PDLNQLRMSFNSAVQ-----KKLNPLFKVSHVVPLPS-L-----PRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 666 -~~~~-----~~~~~l~~~l~~~l~-----~~Lp~~~~P~~i~~v~~-l-----P~t~~GKvdR~~L~~~~~~ 721 (728)
+... ....++++.|.+.+. +.|+.|.++..|.++++ + .+|+++|+.|+.+.+.+++
T Consensus 574 ~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~ 646 (660)
T PLN02430 574 NGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQV 646 (660)
T ss_pred CCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHH
Confidence 1100 111234444433332 35999999998888764 3 5999999999999887765
No 102
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-60 Score=536.33 Aligned_cols=478 Identities=21% Similarity=0.159 Sum_probs=382.8
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEe
Q 004825 210 SMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQ 289 (728)
Q Consensus 210 ~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~ 289 (728)
.+||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++++++++++++++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cceecCCcccchHhhHhhcC--CcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCC
Q 004825 290 DLIIRGDKSIPLYRVIDAQA--PLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGT 367 (728)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGS 367 (728)
+....... ...+... ...+.+.... ......|.+...... .......++.++++|||||
T Consensus 91 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-------~~~~~~~~~~a~i~~TSGt 151 (502)
T PRK08276 91 AALADTAA-----ELAAELPAGVPLLLVVAGP-------VPGFRSYEEALAAQP-------DTPIADETAGADMLYSSGT 151 (502)
T ss_pred cchhhHHH-----HHhhhccccccEEEEeCCC-------CCccccHHHHHhcCC-------CCCCCCCCcceEEEECCCC
Confidence 75432110 1111111 1222221110 012233444332111 1112345678999999999
Q ss_pred CCCCceEEecCcHHHHHH------HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHH
Q 004825 368 TGEPKAIPWTNATPFKAA------ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFV 441 (728)
Q Consensus 368 TG~PKgV~~sh~~l~~~~------~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i 441 (728)
||.||||+++|.++.... ......+....++++++..|++|..++...+.++..|+++++.+. .++..+++.+
T Consensus 152 TG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i 230 (502)
T PRK08276 152 TGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEK-FDAEEALALI 230 (502)
T ss_pred CCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCC-CCHHHHHHHH
Confidence 999999999988754322 222222334578899999999999998777789999999988764 5778999999
Q ss_pred HHhCCcEEEecHHHHHHHHcCCCC--CCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcc
Q 004825 442 QDAKVTMLGVVPSIVRTWKSTNCI--DGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLL 519 (728)
Q Consensus 442 ~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~ 519 (728)
+++++|++.++|+++..++..... ...+++++|.+++||++++.++.+++.+.++ ..+++.||+||++.++......
T Consensus 231 ~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~-~~~~~~yG~tE~~~~~~~~~~~ 309 (502)
T PRK08276 231 ERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG-PIIHEYYASSEGGGVTVITSED 309 (502)
T ss_pred HHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhC-cHhhhhcccccccceeEecCcc
Confidence 999999999999999999876432 3456789999999999999999999888764 7799999999998744433322
Q ss_pred cccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEE
Q 004825 520 QAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFER 599 (728)
Q Consensus 520 ~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~ 599 (728)
.....+++|+|+ +..++|+|+++++++.|.. |||++.+..... .|+.+++.+.+.|..+ +||+|||+|++
T Consensus 310 ~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~-gy~~~~~~~~~~~~~~------~~~~TGD~~~~ 379 (502)
T PRK08276 310 WLAHPGSVGKAV-LGEVRILDEDGNELPPGEI--GTVYFEMDGYPF-EYHNDPEKTAAARNPH------GWVTVGDVGYL 379 (502)
T ss_pred ccccCCCcceec-ccEEEEECCCCCCCcCCCc--eEEEEECCCccc-hhcCCHHHHHHHhcCC------CceeecceEEE
Confidence 223456899999 8899999999999999986 999997555443 3556677777777643 39999999999
Q ss_pred ecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHH
Q 004825 600 TSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSF 679 (728)
Q Consensus 600 ~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l 679 (728)
++||.+++.||.|+++|++|++|++.|||.+|+ .+|+|.+|+|++..++..+ +.+++++++.+ +. ....++.+.+
T Consensus 380 ~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~-~~--~~~~~~~~~i 454 (502)
T PRK08276 380 DEDGYLYLTDRKSDMIISGGVNIYPQEIENLLV-THPKVADVAVFGVPDEEMG-ERVKAVVQPAD-GA--DAGDALAAEL 454 (502)
T ss_pred cCCcCEEEeccCcceEEeCCEEeCHHHHHHHHH-hCCCcceEEEEeCCCcccC-ceEEEEEEECC-CC--CCChhhHHHH
Confidence 999999999999999999999999999999996 8999999999999887777 89999999876 43 2334556678
Q ss_pred HHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhhc
Q 004825 680 NSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQLD 723 (728)
Q Consensus 680 ~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~ 723 (728)
++.++++|+.+|+|..++++++||+|+|||++|++|++.+..-.
T Consensus 455 ~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~~ 498 (502)
T PRK08276 455 IAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEGR 498 (502)
T ss_pred HHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhhh
Confidence 88899999999999999999999999999999999999976533
No 103
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=5.2e-61 Score=552.08 Aligned_cols=506 Identities=14% Similarity=0.106 Sum_probs=377.5
Q ss_pred HhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Q 004825 178 PAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVL 257 (728)
Q Consensus 178 ~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lk 257 (728)
...+.|.++++++|+++|+++.+. .+.++++||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||++
T Consensus 40 ~l~~~l~~~a~~~p~~~a~~~~~~---~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~ 116 (614)
T PRK08180 40 RLTDRLVHWAQEAPDRVFLAERGA---DGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMY 116 (614)
T ss_pred cHHHHHHHHHHHCCCCceeeeccC---CCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHH
Confidence 345668888899999999987532 12245899999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCC-----HHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcC
Q 004825 258 AGYIVVSIADSFA-----SLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDIS 332 (728)
Q Consensus 258 aG~~~vpl~p~~~-----~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 332 (728)
+|++++|++|.++ .+++.+++++++++++|+++.... ..............+...... .......
T Consensus 117 ~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~i~~~~~~------~~~~~~~ 186 (614)
T PRK08180 117 AGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAF----ARALAAVVPADVEVVAVRGAV------PGRAATP 186 (614)
T ss_pred cCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHH----HHHHhhhccCCceEEEecCCC------CCccccc
Confidence 9999999999998 799999999999999999753100 000000001111122221100 0011245
Q ss_pred HHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCC--CCCEEEecCCcchhh
Q 004825 333 WLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIR--KADIVAWPTNLGWMM 410 (728)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~ 410 (728)
|.++...... ...........++++|+|+|||||||.||||+++|+++...+......+++. .+++++++.|++|.+
T Consensus 187 ~~~~~~~~~~-~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~ 265 (614)
T PRK08180 187 FAALLATPPT-AAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTF 265 (614)
T ss_pred HHHHhccccc-cchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHh
Confidence 6655543211 0001111234679999999999999999999999999998887776666664 568999999999999
Q ss_pred hH-HHHHHHhhhCcEEEEeCCCCCc---chHHHHHHHhCCcEEEecHHHHHHHHcCCC----CCCCCCcCeeEEEeecCC
Q 004825 411 GP-WLVYASLLNGASIALYNGSPLG---SGFAKFVQDAKVTMLGVVPSIVRTWKSTNC----IDGYDWSSIRCFGSTGEA 482 (728)
Q Consensus 411 ~~-~~~~~~L~~G~~lvl~~~~~~~---~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~----~~~~~l~~lr~i~~gGe~ 482 (728)
+. ..++.+|+.|+++++.++.+++ ..+++.++++++|+++++|+++..|++... .....+++||.+++||++
T Consensus 266 g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~ 345 (614)
T PRK08180 266 GGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAA 345 (614)
T ss_pred hHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCC
Confidence 87 5678899999999998654443 357888999999999999999999876421 122346899999999999
Q ss_pred CCHHHHHHHHhc----cC-CCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEE
Q 004825 483 SNVDEYLWLMGR----AL-YKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELA 557 (728)
Q Consensus 483 l~~~~~~~~~~~----~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~ 557 (728)
+++++.+++.+. ++ ++++++.||+||++..++.... .....+++|+|++|++++|+|++ . .|||+
T Consensus 346 l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~v~i~d~~-------~--~GEi~ 415 (614)
T PRK08180 346 LSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTG-PLSRAGNIGLPAPGCEVKLVPVG-------G--KLEVR 415 (614)
T ss_pred CCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEeccc-ccCCCCcccCccCCcEEEEecCC-------C--CcEEE
Confidence 999998888764 22 3679999999999865443332 23456799999999999999863 2 39999
Q ss_pred EeccccCCCccccCccccccccccCCCCCCceeEEeCceEEE----ecCceEEEEcccCCeeec-Cceeec--HHHHHHH
Q 004825 558 LSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFER----TSGGYYRAHGRADDTMNL-GGIKVS--SVEIERI 630 (728)
Q Consensus 558 v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~----~~dG~l~~~GR~d~~iki-~G~ri~--~~eIE~~ 630 (728)
|.+..+.. .|+++++.|++.|..+ | ||+|||+|++ ++||+++|+||+||+||+ +|++|+ +.|||.+
T Consensus 416 vrg~~v~~-GY~~~p~~t~~~~~~d----g--w~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~ 488 (614)
T PRK08180 416 VKGPNVTP-GYWRAPELTAEAFDEE----G--YYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAV 488 (614)
T ss_pred EecCccch-hhcCChhHhHhhcccC----C--ceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHH
Confidence 96654432 2466778888777532 3 9999999999 468999999999999985 798776 7889998
Q ss_pred HhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCC--------------CCCCHHHHHHHHHHHHHhhC----CCCcc
Q 004825 631 CNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNY--------------TPPDLNQLRMSFNSAVQKKL----NPLFK 692 (728)
Q Consensus 631 l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~--------------~~~~~~~l~~~l~~~l~~~L----p~~~~ 692 (728)
+. .||.|.+|+|++.++ +.+.|+|++.+ +. +..+.+++++++++.|.+.- +.+.+
T Consensus 489 l~-~~p~V~~a~V~g~~~-----~~~~a~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 561 (614)
T PRK08180 489 SA-GAPLVQDVVITGHDR-----DEIGLLVFPNL-DACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQATGSSTR 561 (614)
T ss_pred hh-cCchhheEEEEcCCC-----CceEEEEEcCH-HHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhh
Confidence 85 899999999999765 45778888765 21 00234556666555544332 22338
Q ss_pred cceEEECCCCCCCCCC------chhHHHHHHHHHh
Q 004825 693 VSHVVPLPSLPRTATN------KVMRRVLRKQLAQ 721 (728)
Q Consensus 693 P~~i~~v~~lP~t~~G------KvdR~~L~~~~~~ 721 (728)
|..+++++++|++++| |+.|+++.+.+++
T Consensus 562 p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~ 596 (614)
T PRK08180 562 VARALLLDEPPSLDAGEITDKGYINQRAVLARRAA 596 (614)
T ss_pred eeEEEEecCCCCCccCccCccccccHHHHHHHhHH
Confidence 9999999999977655 7778888877765
No 104
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.2e-60 Score=587.83 Aligned_cols=494 Identities=15% Similarity=0.147 Sum_probs=383.0
Q ss_pred hhcccccCCCC-CCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Q 004825 181 NCLSVNSKRSL-DDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAG 259 (728)
Q Consensus 181 ~~l~~~~~~~p-d~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG 259 (728)
+.+.++++++| +++|+.+.+. +++||+||+++++++|++|++ |+++||+|+|+++|++++++++|||+++|
T Consensus 635 ~~l~~~~~~~~~~~~ai~~~~~-------~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G 706 (1140)
T PRK06814 635 EALIEAAKIHGFKKLAVEDPVN-------GPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAG 706 (1140)
T ss_pred HHHHHHHHHcCCCCeEeECCCC-------CccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCC
Confidence 44555666665 6777776332 289999999999999999975 99999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC--CcEEEEcCCCCCcccccCCCCcCHHHHH
Q 004825 260 YIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA--PLAIVIPAKGSSFSMKLRDGDISWLDFL 337 (728)
Q Consensus 260 ~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 337 (728)
++++|+||.++.+++.+++++++++++|+++......+.. ...+... ..++.++.... ....+..+.
T Consensus 707 ~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~ 775 (1140)
T PRK06814 707 RVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLG---PLIEALEFGIRIIYLEDVRA--------QIGLADKIK 775 (1140)
T ss_pred CEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcch---hHHHHhccCceEEEehHhhc--------cCChHHHHH
Confidence 9999999999999999999999999999987543211100 1111111 12222221100 001111111
Q ss_pred HhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH-HHHH
Q 004825 338 ERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP-WLVY 416 (728)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~ 416 (728)
..... ...........+++++||+|||||||.||||+++|+++.+.+......++++++|++++..|+.|..+. ..++
T Consensus 776 ~~~~~-~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~ 854 (1140)
T PRK06814 776 GLLAG-RFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLV 854 (1140)
T ss_pred HHhhc-cCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHH
Confidence 11110 000111113567999999999999999999999999999988888888899999999999999999998 6788
Q ss_pred HHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccC
Q 004825 417 ASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRAL 496 (728)
Q Consensus 417 ~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~ 496 (728)
.++..|+++++.+...+...+.+.++++++|++..+|++++.+.+.. ...+++++|.+++|||++++++.+++.+.+
T Consensus 855 ~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~- 931 (1140)
T PRK06814 855 LPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF- 931 (1140)
T ss_pred HHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-
Confidence 99999999999876555567889999999999999999999987653 345678999999999999999998888776
Q ss_pred CCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccc
Q 004825 497 YKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYD 576 (728)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~ 576 (728)
+++++|.||+||++..++.... ......++|+|++|+++++.+..+ .|+. |||++.+.....+ |++++. .
T Consensus 932 ~~~~~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~~g~~~~~~~~~~----~~~~--Gel~v~g~~~~~g--Y~~~~~-~ 1001 (1140)
T PRK06814 932 GIRILEGYGVTETAPVIALNTP-MHNKAGTVGRLLPGIEYRLEPVPG----IDEG--GRLFVRGPNVMLG--YLRAEN-P 1001 (1140)
T ss_pred CCcEEeccccccccceEEecCC-CCCCCCcCCccCCCCeEEEeecCC----CCCc--eEEEEeCCCcchh--hcCCCC-C
Confidence 4889999999999875544332 224467899999999999987643 2454 9999976654332 333221 1
Q ss_pred cccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEE
Q 004825 577 VYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQL 656 (728)
Q Consensus 577 ~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l 656 (728)
..+.. . +++||+|||+|++|+||+++++||.||+||++|+||+|.|||++|. .||.|.+++|++++++..| +.+
T Consensus 1002 ~~~~~--~--~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~-~~~~v~~~~vv~~~~~~~g-~~~ 1075 (1140)
T PRK06814 1002 GVLEP--P--ADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAA-ELWPDALHAAVSIPDARKG-ERI 1075 (1140)
T ss_pred Ccccc--C--CCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHH-hcCCcccEEEEEcccCCCC-ceE
Confidence 11211 1 2349999999999999999999999999999999999999999995 8999999999999988777 777
Q ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHHHh-hCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhh
Q 004825 657 TIVVVFKDSNYTPPDLNQLRMSFNSAVQK-KLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQL 722 (728)
Q Consensus 657 ~a~vv~~~~~~~~~~~~~l~~~l~~~l~~-~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 722 (728)
++++. .. ..+.+++++ ++++ .++.|++|..++.+++||+|++||+||++|+++.++.
T Consensus 1076 ~~~~~-~~----~~~~~~l~~----~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 1133 (1140)
T PRK06814 1076 ILLTT-AS----DATRAAFLA----HAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEA 1133 (1140)
T ss_pred EEEEc-CC----CcCHHHHHH----HHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 77654 22 244555555 4554 5999999999999999999999999999999998874
No 105
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.2e-62 Score=568.11 Aligned_cols=553 Identities=19% Similarity=0.195 Sum_probs=440.8
Q ss_pred HHHcCCChHHHHHHHHHHHHHHHhcCC--CChhhHHHHHHhhcCCCCCCccchhheeeecccCCCC--CCCccCCh----
Q 004825 17 IEALGIPSKLAEQLHEKLAEIVNTHGA--ATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPD--PPAWIPDP---- 88 (728)
Q Consensus 17 ~~~~~~~~~~~~~f~~~l~~~~~~~~~--~hq~~pfe~lv~~l~~~r~~~~~~~~f~~~~~~~~~~--~~~~~~~~---- 88 (728)
..+++.......+|.++++++.+.... +||++||+.+++.+...|+.+ +|+ |+++|++... .....+..
T Consensus 67 ~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~h~~~p~~~l~~~~~~~~~~~-~~l--~~~~~~~~~~~~~~~~~~~~~~~~ 143 (642)
T COG1020 67 TLPLRLDISGRVTFAELLARLRELALGALEHQDLPGEQLVERLGRERSLS-EPL--FDVVFVLQNGPTAGLKLPGLRVEE 143 (642)
T ss_pred eeeeeeccCCCCCHHHHHHHHHHHHHHHhhccCCCHHHHHHHHhhhccCC-CCc--eeeEEEecCccccccccccccccc
Confidence 356777777888999999999988877 999999999999999999988 888 8888888322 11001111
Q ss_pred ----hhhhhccHHHHHHHhccccccCC-CCCCCCCHHHHHHHHhhCHHHHHHHHHHhcCcceecCCceeecCCCCCCCCC
Q 004825 89 ----EAAKVTNVGKLLQTRGEEFLGSG-YKDPISSFSNFQEFSVSNPEVYWKTVLNEMSTSFSVPPQCILRENPNGENHL 163 (728)
Q Consensus 89 ----~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (728)
....++|+.+.+.+. ++...+ |.+ ++|++.+++++..||..++..+. ..+...+...++..+.+
T Consensus 144 ~~~~~~~~~~d~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~l~ll~~~e 212 (642)
T COG1020 144 LGIETPAAKLDLALAVVEG--GLRLSFDYAR-----ELFDAETIERELRHFLQLLAALA----DAPRTSLSALPLLLPSE 212 (642)
T ss_pred ccccCcccccceEEEEEeC--ceEEEEEeec-----ccCCHHHHHHHHHHHHHHHHHHH----hCcccCcccCCCCCHHH
Confidence 234566776665554 566677 988 99999999999999999999873 33333444444333332
Q ss_pred CCCCCCCCCCCcc----hHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEE
Q 004825 164 SNPGGQWLPGAFV----NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIA 239 (728)
Q Consensus 164 ~~~~~~w~~~~~~----~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Va 239 (728)
. ..|+..... ...+..|.+++.+.|+++|+.+.+. ++||+||+.+++++|+.|.+.|++++++|+
T Consensus 213 ~---~~~~~~~~~~~~~~~i~~~f~~~a~~~p~~~a~~~~~~--------~lty~el~~~a~~la~~l~~~g~~~~~~V~ 281 (642)
T COG1020 213 R---EVWNALAAPIPLRLTIHLLFEEQAATTPDAVALVRGGQ--------QLTYAELDARANRLARLLISLGVGPGETVA 281 (642)
T ss_pred H---hhccccccCCCccchHHHHHHHHHHhCCCceeEecCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCeEE
Confidence 3 335522221 2356678889999999999999866 999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCC
Q 004825 240 IDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKG 319 (728)
Q Consensus 240 i~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 319 (728)
++++++++++++++|++|+|++|+|+||.+|.+|+.+++++++++++++..........++. +.
T Consensus 282 i~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------~~--- 345 (642)
T COG1020 282 ILADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG-------------LA--- 345 (642)
T ss_pred EEcCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc-------------cc---
Confidence 99999999999999999999999999999999999999999999999998543211101100 00
Q ss_pred CCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCE
Q 004825 320 SSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADI 399 (728)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~ 399 (728)
.+...... ...........+++++|++|||||||+||||+++|+++++.+.+....+.++.+|+
T Consensus 346 -------------~~~~~~~~---~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~ 409 (642)
T COG1020 346 -------------LDDALSEI---PDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDR 409 (642)
T ss_pred -------------cccccccC---CccCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccE
Confidence 00000000 00000123345689999999999999999999999999999999988899999999
Q ss_pred EEecCCcchhhhHHHHHHHhhhCcEEEEeCCC--CCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCC--CCCCcCeeE
Q 004825 400 VAWPTNLGWMMGPWLVYASLLNGASIALYNGS--PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCID--GYDWSSIRC 475 (728)
Q Consensus 400 ~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~--~~~l~~lr~ 475 (728)
++..++++||.+.+++|.++..|+++++.+.. .++..+.+.+.++++|++..+|+++..++...... ....+.+|.
T Consensus 410 ~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~ 489 (642)
T COG1020 410 VLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQ 489 (642)
T ss_pred EeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccE
Confidence 99999999999999999999999999998754 36678999999999999999999999998762211 122335999
Q ss_pred EEeecCCCCHHHHHHHHhccC-CCCeEecccccccccccccCCcccccc-cccccCCCCCceEEEEcCCCCccCCCCCce
Q 004825 476 FGSTGEASNVDEYLWLMGRAL-YKPVIEYCGGTEIGGGFITGSLLQAQS-LAAFSTPAMGCKLFILGNDGCPIPQNVPGM 553 (728)
Q Consensus 476 i~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~-~~~iG~p~~~~~v~i~d~~g~~vp~g~~gi 553 (728)
+++|||.++..+...+....+ ...+.|.||+||+++............ ..++|+|++|++++|+|+.++++|.|+.
T Consensus 490 ~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild~~~~~~p~gv~-- 567 (642)
T COG1020 490 LLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILDQGLRPLPLGVP-- 567 (642)
T ss_pred EEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEECCCCCcCCCCCC--
Confidence 999999999999887776554 468999999999776544433322111 5799999999999999999999999998
Q ss_pred eEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhc
Q 004825 554 GELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNA 633 (728)
Q Consensus 554 GEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~ 633 (728)
||++|++..+..+ |+++++.|+++|..+ ++|+|||++|+.+||.++++||.|+|||++|+||+++|||.++.
T Consensus 568 gel~i~g~~~a~g-y~~~p~lt~~~f~~~------~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~- 639 (642)
T COG1020 568 GELYIAGLGLALG-YLNRPDLTAERFIAL------RLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALA- 639 (642)
T ss_pred eeeEECCcchhhh-hcCChhhhHHHhhhc------cCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHh-
Confidence 9999988887765 567899999999986 49999999999999999999999999999999999999999995
Q ss_pred CCC
Q 004825 634 VDS 636 (728)
Q Consensus 634 ~~p 636 (728)
.+|
T Consensus 640 ~~~ 642 (642)
T COG1020 640 EQP 642 (642)
T ss_pred cCC
Confidence 664
No 106
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-60 Score=530.84 Aligned_cols=447 Identities=19% Similarity=0.162 Sum_probs=367.5
Q ss_pred cccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEE
Q 004825 183 LSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIV 262 (728)
Q Consensus 183 l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~ 262 (728)
...+++++|+++|+++.+. .+||+||.++++++|++|.+.|+++|++|+++++++++++++++||+++|+++
T Consensus 9 ~~~~a~~~~~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~ 80 (458)
T PRK09029 9 WRHWAQVRPQAIALRLNDE--------VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARV 80 (458)
T ss_pred HHHHHHhCCCceeeecCCc--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEE
Confidence 3445678999999998766 99999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhc
Q 004825 263 VSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRK 342 (728)
Q Consensus 263 vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (728)
+|+++..+.+++..++++++++++++++.... .. . . .. ..+. . .
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~--~----~-------~~-------------~~~~---~--~- 124 (458)
T PRK09029 81 LPLNPQLPQPLLEELLPSLTLDFALVLEGENT----FS--A----L-------TS-------------LHLQ---L--V- 124 (458)
T ss_pred eecCCCCCHHHHHHHHHhcCCCEEEEcCcccc----hh--h----c-------cc-------------cccc---c--c-
Confidence 99999999999999999999999999875311 00 0 0 00 0000 0 0
Q ss_pred cccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhC
Q 004825 343 LKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNG 422 (728)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (728)
.........++++++++|||||||.||||+++|++++..+......+++.++|+++...|++|.+++..++.+|..|
T Consensus 125 ---~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G 201 (458)
T PRK09029 125 ---EGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAG 201 (458)
T ss_pred ---cccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCC
Confidence 00112334678999999999999999999999999999888887888999999999999999999987778899999
Q ss_pred cEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEe
Q 004825 423 ASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIE 502 (728)
Q Consensus 423 ~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (728)
+++++.+. ..+++.+ .++|.+..+|+++..++..... ..++|.+++||+++++.+.+++.+ + +.++++
T Consensus 202 ~~v~~~~~----~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~-~-g~~~~~ 269 (458)
T PRK09029 202 ATLVVRDK----QPLEQAL--AGCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQ-Q-GIRCWC 269 (458)
T ss_pred ceEEeCCh----HHHHHHH--hhceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHH-c-CCcEec
Confidence 99998764 4566777 4899999999999998865432 347999999999999999888765 3 588999
Q ss_pred cccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccccC
Q 004825 503 YCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGM 582 (728)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~ 582 (728)
.||+||++...+.... ....++|+|+++++++|+| |||+|.+.....+ |+++++.+...
T Consensus 270 ~YG~tE~~~~~~~~~~---~~~~~~G~~~~~~~~~i~~-------------gel~v~g~~~~~g-Y~~~~~~~~~~---- 328 (458)
T PRK09029 270 GYGLTEMASTVCAKRA---DGLAGVGSPLPGREVKLVD-------------GEIWLRGASLALG-YWRQGQLVPLV---- 328 (458)
T ss_pred cccccccCcceeccCC---CCCCCCCCCCCCCEEEEeC-------------CEEEEecCceeee-eecCccccccc----
Confidence 9999999865443222 2235699999999999975 7999966554332 23444443211
Q ss_pred CCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEe
Q 004825 583 PSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVF 662 (728)
Q Consensus 583 p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~ 662 (728)
.+.+||+|||+|+++ ||.++++||+||+||++|++|+|.|||++|. .||+|.+|+|++.+++..+ +.++++|+.
T Consensus 329 ---~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~a~v~~ 402 (458)
T PRK09029 329 ---NDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVIN-QHPLVQQVFVVPVADAEFG-QRPVAVVES 402 (458)
T ss_pred ---cCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHh-cCCCcceEEEEccCCcccC-ceEEEEEEc
Confidence 133499999999999 9999999999999999999999999999995 8999999999999988777 789999987
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhhc
Q 004825 663 KDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQLD 723 (728)
Q Consensus 663 ~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~ 723 (728)
.. ..+.. .|+++++++||+|++|..++.++++|+|.+||++|+.|++++++..
T Consensus 403 ~~----~~~~~----~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~ 455 (458)
T PRK09029 403 DS----EAAVV----NLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQL 455 (458)
T ss_pred Cc----ccCHH----HHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhcc
Confidence 64 23444 4555688899999999999999999999999999999999998643
No 107
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.9e-60 Score=536.59 Aligned_cols=510 Identities=19% Similarity=0.184 Sum_probs=386.9
Q ss_pred hhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Q 004825 179 AKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLA 258 (728)
Q Consensus 179 ~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lka 258 (728)
....|.+.++.+|+++|+.+.+. .+||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 20 ~~~~~~~~~~~~~~~~a~~~~~~--------~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~ 91 (545)
T PRK08162 20 PLSFLERAAEVYPDRPAVIHGDR--------RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMA 91 (545)
T ss_pred HHHHHHHHHHHCCCCeEEEECCe--------EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHh
Confidence 33557778889999999998766 8999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC-CcEEEEcCCCCCcccccCCCCcCHHHHH
Q 004825 259 GYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA-PLAIVIPAKGSSFSMKLRDGDISWLDFL 337 (728)
Q Consensus 259 G~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 337 (728)
|++++|++|.++.+++..+++++++++++++...... + .+...... ...+++.............+..++.++.
T Consensus 92 G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (545)
T PRK08162 92 GAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEV---A--REALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFL 166 (545)
T ss_pred CcEEeccccccChHHHHHHHHhCCCeEEEEccchhhH---H--HHHHhhCCCCceEEEecCccccccCCCcccccHHHHh
Confidence 9999999999999999999999999999998754211 0 01111111 1233333221111000011233455554
Q ss_pred HhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHH
Q 004825 338 ERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYA 417 (728)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (728)
..... ..........+++++|+|||||||.||||+++|+++..........+++..++++++..|+.|..+....+.
T Consensus 167 ~~~~~---~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~ 243 (545)
T PRK08162 167 ASGDP---DFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWT 243 (545)
T ss_pred ccCCc---cccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHH
Confidence 32211 001111223467999999999999999999999988766665566678888999999999999988754434
Q ss_pred HhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCC
Q 004825 418 SLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALY 497 (728)
Q Consensus 418 ~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~ 497 (728)
..+.|++.++.. ..++..+++.|+++++|++.++|++++.|++........+.+++.++++|+.++++..+++.+ . +
T Consensus 244 ~~~~~g~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~-~ 320 (545)
T PRK08162 244 VAARAGTNVCLR-KVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEE-I-G 320 (545)
T ss_pred HHHHccEEEEeC-CCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHH-h-C
Confidence 444566555554 367889999999999999999999999998765443334556677789999999998888765 3 5
Q ss_pred CCeEecccccccccccccCCccc----------ccccccccCCCC-CceEEEEcC-CCCccCCCCCceeEEEEeccccCC
Q 004825 498 KPVIEYCGGTEIGGGFITGSLLQ----------AQSLAAFSTPAM-GCKLFILGN-DGCPIPQNVPGMGELALSPLIFGA 565 (728)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~-~~~v~i~d~-~g~~vp~g~~giGEl~v~~~~~~~ 565 (728)
+++++.||+||+++.++...... .....+.|.+.+ +..++|+|+ .+++++.+...+|||+|.+..+..
T Consensus 321 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~ 400 (545)
T PRK08162 321 FDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMK 400 (545)
T ss_pred CceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchh
Confidence 88999999999864433221100 011235566654 346889995 688887642125999997665433
Q ss_pred CccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEe
Q 004825 566 SSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIG 645 (728)
Q Consensus 566 ~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~ 645 (728)
.|+++++.+...|.. | ||+|||+|++++||+++++||.|++||++|++|+|.|||++|. .||+|.+++|++
T Consensus 401 -gY~~~~~~~~~~~~~-----g--~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~vv~ 471 (545)
T PRK08162 401 -GYLKNPKATEEAFAG-----G--WFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLY-RHPAVLVAAVVA 471 (545)
T ss_pred -hhcCChhhhHHHhhC-----C--CcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHH-hCCcccEEEEEe
Confidence 346677777777742 3 9999999999999999999999999999999999999999995 999999999999
Q ss_pred ecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHhhcc
Q 004825 646 VPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQLDQ 724 (728)
Q Consensus 646 ~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~ 724 (728)
.+++..+ +.+++++++.+ +. ..+.. .+++++++.||.|++|..+++ ++||+|+|||++|+.|+++++++..
T Consensus 472 ~~~~~~~-~~~~~~v~~~~-~~-~~~~~----~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~~l~~ 542 (545)
T PRK08162 472 KPDPKWG-EVPCAFVELKD-GA-SATEE----EIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLREQAKSLKA 542 (545)
T ss_pred eeccccC-ceEEEEEEeCC-CC-CCCHH----HHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHHHHHhhhhh
Confidence 8887666 78999998876 43 23444 455568889999999998875 6899999999999999999988654
No 108
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.6e-60 Score=519.92 Aligned_cols=407 Identities=17% Similarity=0.151 Sum_probs=347.2
Q ss_pred EEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHH
Q 004825 195 VIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEI 274 (728)
Q Consensus 195 Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l 274 (728)
|+++.++ ++||+||.++++++|+.|. .|+++|++|+|+++|++++++++||++++|++++|++++.+.+++
T Consensus 1 ~~~~~~~--------~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~ 71 (414)
T PRK08308 1 MLIVNDE--------EYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAA 71 (414)
T ss_pred CeEecCc--------eecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHH
Confidence 4666666 9999999999999999985 689999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCccccccCC
Q 004825 275 SARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQP 354 (728)
Q Consensus 275 ~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (728)
..++++++++++++++.... +. ......
T Consensus 72 ~~~~~~~~~~~~i~~~~~~~--------------------~~--------------------------------~~~~~~ 99 (414)
T PRK08308 72 IRMAKRAGCHGLLYGESDFT--------------------KL--------------------------------EAVNYL 99 (414)
T ss_pred HHHHHhCCCCEEEecCcccc--------------------cc--------------------------------cCCCCC
Confidence 99999999999998762100 00 001124
Q ss_pred CCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCC
Q 004825 355 VEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP-WLVYASLLNGASIALYNGSPL 433 (728)
Q Consensus 355 ~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~ 433 (728)
+++++|++|||||||.||||+++|+++.+.+.+....+++..+|+++...|++|.+++ ..++.+|..|+++++.+. .+
T Consensus 100 ~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~-~~ 178 (414)
T PRK08308 100 AEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN-KN 178 (414)
T ss_pred CCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC-CC
Confidence 5789999999999999999999999999988888888889999999999999999987 578999999999999864 56
Q ss_pred cchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEeccccccccccc
Q 004825 434 GSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGF 513 (728)
Q Consensus 434 ~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 513 (728)
+..+++.++++++|++.++|+++..+.+.... ..+++.+++||+++++++.+++.+. ..+++|.||+||+++..
T Consensus 179 ~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~ 252 (414)
T PRK08308 179 PKFALNILRNTPQHILYAVPLMLHILGRLLPG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVS 252 (414)
T ss_pred HHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCee
Confidence 78899999999999999999999999875322 2368899999999999998888765 36899999999998543
Q ss_pred ccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEe
Q 004825 514 ITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRH 593 (728)
Q Consensus 514 ~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~T 593 (728)
.... .....++|+|++++++++.++. |.+ |||++... .+||+|
T Consensus 253 ~~~~---~~~~~~~G~p~~~~~~~~~~~~------~~~--gel~v~~~--------------------------~~~~~T 295 (414)
T PRK08308 253 ICPD---MKSHLDLGNPLPHVSVSAGSDE------NAP--EEIVVKMG--------------------------DKEIFT 295 (414)
T ss_pred ecCC---CCCCCccCccCCCeEEEEecCC------CCC--ceEEEEcC--------------------------CceEEC
Confidence 3211 1245689999999999998643 444 99998421 139999
Q ss_pred CceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHH
Q 004825 594 GDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLN 673 (728)
Q Consensus 594 GDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~ 673 (728)
||+|++++||+++++||.|++||++|+||+|.|||++|. .+|+|.+|+|++.+++..+ +.++++++... ..+..
T Consensus 296 GDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~-~~~~v~~a~v~~~~~~~~~-~~~~~~v~~~~----~~~~~ 369 (414)
T PRK08308 296 KDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVML-RLPGVQEAVVYRGKDPVAG-ERVKAKVISHE----EIDPV 369 (414)
T ss_pred CceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCCC-ceEEEEEEeCC----CCCHH
Confidence 999999999999999999999999999999999999995 8999999999999888777 78889988765 24555
Q ss_pred HHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHH
Q 004825 674 QLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLR 716 (728)
Q Consensus 674 ~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 716 (728)
++++ +++++|+.|++|..++++++||+|++||++|++|+
T Consensus 370 ~l~~----~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 370 QLRE----WCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred HHHH----HHHHhCccccCCcEEEEeccCCCCCCcCeehhhhh
Confidence 5544 67788999999999999999999999999999543
No 109
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.2e-59 Score=535.12 Aligned_cols=501 Identities=18% Similarity=0.179 Sum_probs=365.1
Q ss_pred hhcccccCCCCCCeEEEEeccCC-CCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Q 004825 181 NCLSVNSKRSLDDIVIRWCDEGD-GGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAG 259 (728)
Q Consensus 181 ~~l~~~~~~~pd~~Al~~~~~~~-~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG 259 (728)
..|.+++..+|+++|+++.+..+ ..+..+++||+||.++++++|++|.+.| ++||+|+|+++|++++++++|||+++|
T Consensus 5 ~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~~~~G 83 (578)
T PRK05850 5 SLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGALQAG 83 (578)
T ss_pred HHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHHHHcC
Confidence 45777888999999999754210 1112358999999999999999999999 689999999999999999999999999
Q ss_pred cEEEecCC---CCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhc----CCcEEEEcCCCCCcccccCCCCcC
Q 004825 260 YIVVSIAD---SFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQ----APLAIVIPAKGSSFSMKLRDGDIS 332 (728)
Q Consensus 260 ~~~vpl~p---~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~ 332 (728)
++++|+++ ..+.+++.++|++++++++++++....... ...... ...++.++. .
T Consensus 84 ~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-------------~- 144 (578)
T PRK05850 84 LIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVT-----EYVAPQPGQSAPPVIEVDL-------------L- 144 (578)
T ss_pred ceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHH-----HHHhhcccccccceEeecc-------------c-
Confidence 99999997 557899999999999999999875431100 110000 001111110 0
Q ss_pred HHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHh-cC-----CCCCCEEEecCCc
Q 004825 333 WLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCH-MD-----IRKADIVAWPTNL 406 (728)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~-~~-----~~~~d~~l~~~~~ 406 (728)
++. .. .........+++++||+|||||||.||||+++|+++++.+.+.... +. ...++++++..|+
T Consensus 145 --~~~---~~---~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 216 (578)
T PRK05850 145 --DLD---SP---RGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPF 216 (578)
T ss_pred --ccc---cC---CccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCC
Confidence 000 00 0001123456899999999999999999999999998876655433 22 3568899999999
Q ss_pred chhhhH-HHHHHHhhhCcEEEEeCCC---CCcchHHHHHHHhCCcEEEecHHH-HHHHHcCC---CCCCCCCcCeeEEEe
Q 004825 407 GWMMGP-WLVYASLLNGASIALYNGS---PLGSGFAKFVQDAKVTMLGVVPSI-VRTWKSTN---CIDGYDWSSIRCFGS 478 (728)
Q Consensus 407 ~~~~~~-~~~~~~L~~G~~lvl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~-l~~l~~~~---~~~~~~l~~lr~i~~ 478 (728)
+|+.++ ..++.+++.|+++++.+.. .++..+++++++++++++ .+|++ +..+.... .....+++++|.+++
T Consensus 217 ~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 295 (578)
T PRK05850 217 YHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIIS 295 (578)
T ss_pred CCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEE
Confidence 999998 5689999999999998642 257789999999999866 45554 44333211 112345788999999
Q ss_pred ecCCCCHHHHHHHHhccC-----CCCeEecccccccccccccCCcccc------------------------cccccccC
Q 004825 479 TGEASNVDEYLWLMGRAL-----YKPVIEYCGGTEIGGGFITGSLLQA------------------------QSLAAFST 529 (728)
Q Consensus 479 gGe~l~~~~~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~------------------------~~~~~iG~ 529 (728)
||+++++++.+++.+.++ +..+++.||+||++..+........ ....++|.
T Consensus 296 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~ 375 (578)
T PRK05850 296 GSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGS 375 (578)
T ss_pred CcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccC
Confidence 999999999888877653 3468999999998754333211100 01124556
Q ss_pred CCCCceEEEEcC-CCCccCCCCCceeEEEEeccccCCCccccCcccccccccc---CCC--CCCceeEEeCceEEEecCc
Q 004825 530 PAMGCKLFILGN-DGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSG---MPS--RNGQILRRHGDVFERTSGG 603 (728)
Q Consensus 530 p~~~~~v~i~d~-~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~---~p~--~~g~~~y~TGDl~~~~~dG 603 (728)
|. +.+++|+|+ +++++|.|+. |||+|.+..+..+ |+++++.+++.|.. +|. ....+||+|||+|+++ ||
T Consensus 376 p~-~~~~~ivd~~~~~~~~~g~~--Gel~v~g~~~~~g-Y~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G 450 (578)
T PRK05850 376 PR-SPTVRIVDPDTCIECPAGTV--GEIWVHGDNVAAG-YWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EG 450 (578)
T ss_pred CC-CCEEEEEcCCCCcCCCCCCE--EEEEEecCccccc-ccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CC
Confidence 64 678999995 4789999986 9999977655432 46788888888853 221 1123599999999998 99
Q ss_pred eEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHH--HHHHHHH
Q 004825 604 YYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQ--LRMSFNS 681 (728)
Q Consensus 604 ~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~--l~~~l~~ 681 (728)
+++++||.||+||++|++|+|.|||++|. .||.+ +++|++++++ .+ +.++++|++++ +. ..+.++ ....+++
T Consensus 451 ~l~~~GR~~d~i~~~G~~i~p~eIE~~l~-~~~~~-~~~v~~v~~~-~~-~~~~a~v~~~~-~~-~~~~~~~~~~~~l~~ 524 (578)
T PRK05850 451 ELFIVGRIKDLLIVDGRNHYPDDIEATIQ-EITGG-RVAAISVPDD-GT-EKLVAIIELKK-RG-DSDEEAMDRLRTVKR 524 (578)
T ss_pred EEEEEcccccEEEECCeecCHHHHHHHHH-HhcCC-cEEEEEecCC-Cc-eEEEEEEEecc-cc-CcchhhhhhHHHHHH
Confidence 99999999999999999999999999996 89985 5788888876 45 78999999876 33 122221 2234444
Q ss_pred HHHhhCCC--CcccceEEEC--CCCCCCCCCchhHHHHHHHHHh
Q 004825 682 AVQKKLNP--LFKVSHVVPL--PSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 682 ~l~~~Lp~--~~~P~~i~~v--~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
++...++. ++.|..++++ +.||+|++||++|++|++.+.+
T Consensus 525 ~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~ 568 (578)
T PRK05850 525 EVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQ 568 (578)
T ss_pred HHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHc
Confidence 44443332 2456666666 4899999999999999999876
No 110
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=6.2e-59 Score=514.49 Aligned_cols=435 Identities=20% Similarity=0.227 Sum_probs=354.3
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecc
Q 004825 212 TLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 212 TY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
||+||.++++++|+.|++.|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred eecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCC
Q 004825 292 IIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEP 371 (728)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~P 371 (728)
.... .+. ...+.++..... ...........+++++++|||||||.|
T Consensus 81 ~~~~--~~~-----------------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGtTG~P 126 (436)
T TIGR01923 81 LEEK--DFQ-----------------------------ADSLDRIEAAGR---YETSLSASFNMDQIATLMFTSGTTGKP 126 (436)
T ss_pred cccc--cee-----------------------------ecchHhhhhccc---ccccccccCCcCceEEEEeCCCCCCCC
Confidence 3110 000 000111111000 001112334568999999999999999
Q ss_pred ceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 372 KAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 372 KgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
|+|+++|+++...+.+....++++++|++++..|+.|..++..++.++..|+++++.++. ..+++.|+++++|++.+
T Consensus 127 K~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~~ 203 (436)
T TIGR01923 127 KAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHISL 203 (436)
T ss_pred cEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEEe
Confidence 999999999999888888889999999999999999999988889999999999998643 38999999999999999
Q ss_pred cHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCC
Q 004825 452 VPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPA 531 (728)
Q Consensus 452 ~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~ 531 (728)
+|+++..|.+.... .+++|.+++|||++++++.+++.. . +++++|.||+||++..++...........++|+|+
T Consensus 204 ~P~~l~~l~~~~~~----~~~l~~~~~~G~~~~~~~~~~~~~-~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~ 277 (436)
T TIGR01923 204 VPTQLNRLLDEGGH----NENLRKILLGGSAIPAPLIEEAQQ-Y-GLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPL 277 (436)
T ss_pred HHHHHHHHHhCcCC----CCceEEEEECCCCCCHHHHHHHHH-h-CCceeeEecCCccchhccCcCccccccccCCCccC
Confidence 99999999876432 268999999999999999887765 3 58999999999998765544332222223589999
Q ss_pred CCceEEE-EcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcc
Q 004825 532 MGCKLFI-LGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGR 610 (728)
Q Consensus 532 ~~~~v~i-~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR 610 (728)
++++++| .|+.+ + .|||++.+.....+ |+.+++.+...+. .+||+|||+|++++||.+++.||
T Consensus 278 ~~~~~~i~~~~~~------~--~Gel~v~~~~~~~g-y~~~~~~~~~~~~-------~~~~~TGD~~~~~~dg~~~~~GR 341 (436)
T TIGR01923 278 AGREIKIKVDNKE------G--HGEIMVKGANLMKG-YLYQGELTPAFEQ-------QGWFNTGDIGELDGEGFLYVLGR 341 (436)
T ss_pred CCcEEEEEeCCCC------C--ceEEEEECCccchh-hCCChhhhhhhhc-------CCCeeccceEEEcCCCCEEEecc
Confidence 9999999 44332 3 39999976654432 2334444443332 23999999999999999999999
Q ss_pred cCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 004825 611 ADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPL 690 (728)
Q Consensus 611 ~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~ 690 (728)
.||+||++|++|++.+||++|. .+|.|.+++|++.++...+ ..++++++... + .+..++. +++++.|+.|
T Consensus 342 ~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~-~---~~~~~l~----~~l~~~l~~~ 411 (436)
T TIGR01923 342 RDDLIISGGENIYPEEIETVLY-QHPGIQEAVVVPKPDAEWG-QVPVAYIVSES-D---ISQAKLI----AYLTEKLAKY 411 (436)
T ss_pred ccCeEEeCCEeeCHHHHHHHHH-hCCCeeEEEEeCCcchhcC-CeeEEEEEECC-C---CCHHHHH----HHHHHhhhCC
Confidence 9999999999999999999995 8999999999988776655 78888888765 2 3444444 4677889999
Q ss_pred cccceEEECCCCCCCCCCchhHHHH
Q 004825 691 FKVSHVVPLPSLPRTATNKVMRRVL 715 (728)
Q Consensus 691 ~~P~~i~~v~~lP~t~~GKvdR~~L 715 (728)
++|..++++++||+|++||++|++|
T Consensus 412 ~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 412 KVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred CCCeEEEEecCCCCCCCCceecccC
Confidence 9999999999999999999999875
No 111
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-59 Score=538.20 Aligned_cols=516 Identities=16% Similarity=0.145 Sum_probs=376.3
Q ss_pred CCCCCcchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH
Q 004825 170 WLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSV 249 (728)
Q Consensus 170 w~~~~~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~v 249 (728)
|..........++|.++++++||++|+++.+.. .+.++++||+||.++++++|++|++.|+++||+|+|+++|+++++
T Consensus 42 ~~~~~~~~~l~~~l~~~a~~~pd~~a~~~~~~~--~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~ 119 (624)
T PRK12582 42 HPLGPYPRSIPHLLAKWAAEAPDRPWLAQREPG--HGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHA 119 (624)
T ss_pred CCCCCcccCHHHHHHHHHHHCCCchheecccCC--CCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHH
Confidence 333333444667788889999999999875421 233569999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcEEEecCCCCCH-----HHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCccc
Q 004825 250 VIYLAIVLAGYIVVSIADSFAS-----LEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSM 324 (728)
Q Consensus 250 va~lA~lkaG~~~vpl~p~~~~-----~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 324 (728)
+++|||+++|++++|++|.++. +++.+++++++++++|+++.... .............++.+.....
T Consensus 120 ~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~---- 191 (624)
T PRK12582 120 LMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPF----ARALAALDLLDVTVVHVTGPGE---- 191 (624)
T ss_pred HHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHH----HHHHHhhhhcCceEEEEcCCCc----
Confidence 9999999999999999999985 89999999999999999763110 0000111111122333321110
Q ss_pred ccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCC---CCEEE
Q 004825 325 KLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRK---ADIVA 401 (728)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~---~d~~l 401 (728)
......+.++...... ...........++++++|+|||||||.||||+++|++++..+......+.... .++++
T Consensus 192 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l 268 (624)
T PRK12582 192 --GIASIAFADLAATPPT-AAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSL 268 (624)
T ss_pred --ccccccHHHHhhcCCc-chhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEE
Confidence 0112345554432211 00001112346789999999999999999999999999887766655455444 57999
Q ss_pred ecCCcchhhhH-HHHHHHhhhCcEEEEeCCCCCcc---hHHHHHHHhCCcEEEecHHHHHHHHcCCCCC----CCCCcCe
Q 004825 402 WPTNLGWMMGP-WLVYASLLNGASIALYNGSPLGS---GFAKFVQDAKVTMLGVVPSIVRTWKSTNCID----GYDWSSI 473 (728)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~---~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~----~~~l~~l 473 (728)
.+.|++|.++. ..++.+|..|+++++.++..++. .+++.++++++|++.++|+++..|++..... ...+++|
T Consensus 269 ~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~sl 348 (624)
T PRK12582 269 DWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNL 348 (624)
T ss_pred EechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhhe
Confidence 99999999987 45778999999999976544443 4567788999999999999999887542111 1246799
Q ss_pred eEEEeecCCCCHHHHHHHHhcc----C-CCCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCCCCccCC
Q 004825 474 RCFGSTGEASNVDEYLWLMGRA----L-YKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQ 548 (728)
Q Consensus 474 r~i~~gGe~l~~~~~~~~~~~~----~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~ 548 (728)
|.+++||+++++++.+++.+.+ + ++++++.||+||++.+++.... .....+++|+|++|++++|+ |.
T Consensus 349 r~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~v~i~-------~~ 420 (624)
T PRK12582 349 RLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHW-DTERVGLIGLPLPGVELKLA-------PV 420 (624)
T ss_pred eEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccC-CCCCCCCCCcCCCCcEEEEc-------cC
Confidence 9999999999999998887652 2 3579999999999865442222 22446789999999999985 45
Q ss_pred CCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEE-e---cCceEEEEcccCCeeec-Cceeec
Q 004825 549 NVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFER-T---SGGYYRAHGRADDTMNL-GGIKVS 623 (728)
Q Consensus 549 g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~-~---~dG~l~~~GR~d~~iki-~G~ri~ 623 (728)
|+. |||+|.+..+.. .|+++++.|++.|..+ | ||+|||+|++ + +||+++|+||+||+||+ +|++|+
T Consensus 421 G~~--GEl~vrg~~v~~-GY~~~p~~t~~~f~~d----g--w~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~ 491 (624)
T PRK12582 421 GDK--YEVRVKGPNVTP-GYHKDPELTAAAFDEE----G--FYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVS 491 (624)
T ss_pred CCc--eEEEEECCcccc-cccCCccchhhhcCcc----C--CccccceEEecCCcCCCCceEEeccchhhEecCCCcEec
Confidence 665 999996655432 2566788888888532 3 9999999998 4 46999999999999996 799999
Q ss_pred HHHHH--HHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecC---------CCCC---CCCHHHHHHHHHHHH---Hhh
Q 004825 624 SVEIE--RICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKD---------SNYT---PPDLNQLRMSFNSAV---QKK 686 (728)
Q Consensus 624 ~~eIE--~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~---------~~~~---~~~~~~l~~~l~~~l---~~~ 686 (728)
|.+|| .++ ..||.|.+|+|++.+++ .+.+.|++.. .+.. ..+.+++++.+++.| ++.
T Consensus 492 p~~iE~e~~l-~~~p~V~~a~VvG~~~~-----~~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 565 (624)
T PRK12582 492 VGTLRPDAVA-ACSPVIHDAVVAGQDRA-----FIGLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNAE 565 (624)
T ss_pred hHHHHHHHHH-hcCcchheEEEEcCCCC-----cEEEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHhh
Confidence 99885 566 48999999999997654 3444444321 0100 013345555554444 445
Q ss_pred CCCCc-ccceEEECCCCC------CCCCCchhHHHHHHHHHh
Q 004825 687 LNPLF-KVSHVVPLPSLP------RTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 687 Lp~~~-~P~~i~~v~~lP------~t~~GKvdR~~L~~~~~~ 721 (728)
+|.+. +|..+++++++| +|++||+.|++..+.+++
T Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~ 607 (624)
T PRK12582 566 AGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAA 607 (624)
T ss_pred cCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHH
Confidence 77777 999999999887 456677888888777765
No 112
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.7e-59 Score=533.08 Aligned_cols=495 Identities=17% Similarity=0.164 Sum_probs=374.1
Q ss_pred hHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Q 004825 177 NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIV 256 (728)
Q Consensus 177 ~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~l 256 (728)
....++|...++++|+.+++ .... ..++.+||.||+.+++++|++|+++|+++||+|+|+++|++++++++|||+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~ 95 (579)
T PRK09192 21 PTLVEALDYAALGEAGMNFY-DRRG----QLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQ 95 (579)
T ss_pred hhHHHHHHHhhccCCceEEE-ecCC----CEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHH
Confidence 45667788788777755543 3221 123589999999999999999999999999999999999999999999999
Q ss_pred HcCcEEEecCCCCC-------HHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCC
Q 004825 257 LAGYIVVSIADSFA-------SLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDG 329 (728)
Q Consensus 257 kaG~~~vpl~p~~~-------~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 329 (728)
++|++++|+++..+ .+++.+++++++++++|+++...... ........ ...
T Consensus 96 ~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~-----~~~~~~~~-~~~---------------- 153 (579)
T PRK09192 96 YAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWV-----NEATHGNP-LLH---------------- 153 (579)
T ss_pred HcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHH-----HHhhcccc-ccc----------------
Confidence 99999999987543 68999999999999999987532100 01110000 000
Q ss_pred CcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHH-hcCCCCCCEEEecCCcch
Q 004825 330 DISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWC-HMDIRKADIVAWPTNLGW 408 (728)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~-~~~~~~~d~~l~~~~~~~ 408 (728)
...+.++..... .........+++++||+|||||||.||||+++|++++..+..... .+++.++|+++++.|++|
T Consensus 154 ~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h 229 (579)
T PRK09192 154 VLSHAWFKALPE----ADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYH 229 (579)
T ss_pred eeehhhhcccCC----CccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCC
Confidence 111222211111 011122346789999999999999999999999999988877776 789999999999999999
Q ss_pred hhhHH-HHHHHhhhCcEEEEeCCC---CCcchHHHHHHHhCCcEEEecHHHHHHHHcCC---CCCCCCCcCeeEEEeecC
Q 004825 409 MMGPW-LVYASLLNGASIALYNGS---PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTN---CIDGYDWSSIRCFGSTGE 481 (728)
Q Consensus 409 ~~~~~-~~~~~L~~G~~lvl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~---~~~~~~l~~lr~i~~gGe 481 (728)
++++. .++.++..|+++++.+.. .++..+++.+.++++|++..+|.++..+.... .....+++++|.+++||+
T Consensus 230 ~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~ 309 (579)
T PRK09192 230 DMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGAD 309 (579)
T ss_pred cchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCc
Confidence 99985 466789999999876521 24667899999999998777666565554322 122356789999999999
Q ss_pred CCCHHHHHHHHhccC-----CCCeEecccccccccccccCCcccc---------------------------cccccccC
Q 004825 482 ASNVDEYLWLMGRAL-----YKPVIEYCGGTEIGGGFITGSLLQA---------------------------QSLAAFST 529 (728)
Q Consensus 482 ~l~~~~~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~---------------------------~~~~~iG~ 529 (728)
++++.+.+.+.+.+. ...+++.||+||+++.++....... ....++|+
T Consensus 310 ~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ 389 (579)
T PRK09192 310 MIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGK 389 (579)
T ss_pred cCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCC
Confidence 999999888877653 1358999999999865443221100 01247899
Q ss_pred CCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEc
Q 004825 530 PAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHG 609 (728)
Q Consensus 530 p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~G 609 (728)
|++|++++|+|+++++++.|+. |||++.+..+..+ |+++ +.+.+.|..+ | ||+|||+|++ +||+++++|
T Consensus 390 ~~p~~~v~i~d~~~~~~~~g~~--Gel~i~g~~~~~g-Y~~~-~~~~~~~~~d----g--w~~TGDlg~~-~~G~l~~~G 458 (579)
T PRK09192 390 ALPGHEIEIRNEAGMPLPERVV--GHICVRGPSLMSG-YFRD-EESQDVLAAD----G--WLDTGDLGYL-LDGYLYITG 458 (579)
T ss_pred cCCCcEEEEECCCCCCCCCCCE--EEEEecCCchhhh-hcCC-ccccccccCC----c--eeeccceeeE-ECCEEEEEe
Confidence 9999999999999999999975 9999966544332 3444 5555555432 3 9999999999 999999999
Q ss_pred ccCCeeecCceeecHHHHHHHHhcCCCCee--eeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhC
Q 004825 610 RADDTMNLGGIKVSSVEIERICNAVDSNVL--ETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKL 687 (728)
Q Consensus 610 R~d~~iki~G~ri~~~eIE~~l~~~~p~V~--~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~L 687 (728)
|+||+||++|++|+|.|||++|. .||+|. +|+|++.+++. + +.++++++... +. ..+.+++++++++++..
T Consensus 459 R~dd~i~~~G~~v~p~eIE~~l~-~~p~V~~~~~~v~~~~~~~-~-~~~~~~v~~~~-~~-~~~~~~l~~~~~~~l~~-- 531 (579)
T PRK09192 459 RAKDLIIINGRNIWPQDIEWIAE-QEPELRSGDAAAFSIAQEN-G-EKIVLLVQCRI-SD-EERRGQLIHALAALVRS-- 531 (579)
T ss_pred ccccEEEECCCccCHHHHHHHHH-hcCCccCCcEEEEEeccCC-C-eeEEEEEEecC-CC-hHHHHHHHHHHHHHHHH--
Confidence 99999999999999999999995 899998 89999988874 4 57888887665 33 23445666655554432
Q ss_pred CCCcccceEEECC--CCCCCCCCchhHHHHHHHHHh
Q 004825 688 NPLFKVSHVVPLP--SLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 688 p~~~~P~~i~~v~--~lP~t~~GKvdR~~L~~~~~~ 721 (728)
.+++|..+++++ .||+|++||++|++|++++..
T Consensus 532 -~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~ 566 (579)
T PRK09192 532 -EFGVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLS 566 (579)
T ss_pred -HhCCCceEEEeCCCCcCCCCCcchhHHHHHHHHHc
Confidence 467787777775 899999999999999998875
No 113
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-57 Score=517.03 Aligned_cols=489 Identities=18% Similarity=0.178 Sum_probs=365.0
Q ss_pred hhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Q 004825 181 NCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGY 260 (728)
Q Consensus 181 ~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~ 260 (728)
+.|..+++.+|+.+|+...+. .+.+||.||+++++++|++|.+.|+++||+|+|+++|++++++++|||+++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~------~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~ 79 (545)
T PRK07768 6 EKMYANARTSPRGMVTGEPDA------PVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGA 79 (545)
T ss_pred HHHHHHhhCCCcceEEecCCC------ceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCc
Confidence 445567788999999966554 24899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHH-------HHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCH
Q 004825 261 IVVSIADSFASLEI-------SARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISW 333 (728)
Q Consensus 261 ~~vpl~p~~~~~~l-------~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 333 (728)
+++|+++..+.+++ .++++.++++.+++++...... ....... .....+
T Consensus 80 v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~~~~~------------------~~~~~~ 135 (545)
T PRK07768 80 SLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAA------PVLEEKG------------------IRVLTV 135 (545)
T ss_pred cccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhh------hhhcccC------------------Cceeeh
Confidence 99999998887654 4567778999999977532110 0000000 012233
Q ss_pred HHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCC-CEEEecCCcchhhhH
Q 004825 334 LDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKA-DIVAWPTNLGWMMGP 412 (728)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~ 412 (728)
.++..... .......++++++|+|||||||.||||+++|+++...+......+++..+ |++++..|++|+.++
T Consensus 136 ~~l~~~~~------~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~ 209 (545)
T PRK07768 136 ADLLAADP------IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGM 209 (545)
T ss_pred hhhcccCC------CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHH
Confidence 34332111 12234567999999999999999999999999999988887777888876 899999999999998
Q ss_pred H-HHHHHhhhCcEEEEeCCC---CCcchHHHHHHHhCCcEEEecHHHHHHHHcCC----CCCCCCCcCeeEEEeecCCCC
Q 004825 413 W-LVYASLLNGASIALYNGS---PLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTN----CIDGYDWSSIRCFGSTGEASN 484 (728)
Q Consensus 413 ~-~~~~~L~~G~~lvl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~----~~~~~~l~~lr~i~~gGe~l~ 484 (728)
. .++.++..|+++++.... .++..+++.++++++|++..+|.++..+.... .....+++++|.+++||++++
T Consensus 210 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~ 289 (545)
T PRK07768 210 VGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPID 289 (545)
T ss_pred HHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCC
Confidence 5 467789999999988642 25567889999999999988888777665421 112356789999999999999
Q ss_pred HHHHHHHHhc---cC--CCCeEecccccccccccccCCccc-------------------------ccccccccCCCCCc
Q 004825 485 VDEYLWLMGR---AL--YKPVIEYCGGTEIGGGFITGSLLQ-------------------------AQSLAAFSTPAMGC 534 (728)
Q Consensus 485 ~~~~~~~~~~---~~--~~~l~n~YG~TE~~~~~~~~~~~~-------------------------~~~~~~iG~p~~~~ 534 (728)
++..+++.+. ++ ...+++.||+||++..++...... .....++|+|++|+
T Consensus 290 ~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~ 369 (545)
T PRK07768 290 PADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGL 369 (545)
T ss_pred HHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCC
Confidence 9998887653 32 235999999999986543322110 11245899999999
Q ss_pred eEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCe
Q 004825 535 KLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDT 614 (728)
Q Consensus 535 ~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~ 614 (728)
+++|+|++|++++.|+. |||++.+..+..+ |++...+.. ... +..||+|||+|++++||.++++||.||+
T Consensus 370 ~~~i~~~~~~~~~~g~~--Gel~v~~~~~~~g--y~~~~~~~~----~~~--~~g~~~TGDl~~~~~~g~l~~~GR~~d~ 439 (545)
T PRK07768 370 EVRVVDEDGQVLPPRGV--GVIELRGESVTPG--YLTMDGFIP----AQD--ADGWLDTGDLGYLTEEGEVVVCGRVKDV 439 (545)
T ss_pred EEEEECCCCCCCCCCCE--EEEEEccCccccc--ccCCCCCcc----ccc--CCCeeeccceEEEecCCEEEEEccccce
Confidence 99999999999999986 9999976544332 233332221 111 2239999999999999999999999999
Q ss_pred eecCceeecHHHHHHHHhcCCCCeeeeEEEeecC--CCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcc
Q 004825 615 MNLGGIKVSSVEIERICNAVDSNVLETAAIGVPP--PDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFK 692 (728)
Q Consensus 615 iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~--~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~ 692 (728)
||++|++|+|.|||++|. .||+|.+++|+++.. ...+ +.+++++.... ..+.....++.+.+++.+...+. .+
T Consensus 440 i~~~G~~v~~~eiE~~l~-~~~~v~~~~vv~~~~~~~~~~-~~~~~~v~~~~-~~~~~~~~~l~~~~~~~l~~~~~--~~ 514 (545)
T PRK07768 440 IIMAGRNIYPTDIERAAA-RVEGVRPGNAVAVRLDAGHSR-EGFAVAVESNA-FEDPAEVRRIRHQVAHEVVAEVG--VR 514 (545)
T ss_pred EEECCEecCHHHHHHHHH-hCcccccceEEEEEecCCCCc-eEEEEEEEecc-cccHHHHHHHHHHHHHHHHHHhC--CC
Confidence 999999999999999995 899999988776543 3333 44554544433 22011122344444444433322 56
Q ss_pred cceEEECC--CCCCCCCCchhHHHHHHHHH
Q 004825 693 VSHVVPLP--SLPRTATNKVMRRVLRKQLA 720 (728)
Q Consensus 693 P~~i~~v~--~lP~t~~GKvdR~~L~~~~~ 720 (728)
|..+.+++ .||+|++||++|+.|+++|.
T Consensus 515 p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 515 PRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred ccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 77777776 89999999999999999875
No 114
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2.9e-57 Score=496.09 Aligned_cols=504 Identities=19% Similarity=0.204 Sum_probs=374.8
Q ss_pred CCCCCcchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH
Q 004825 170 WLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSV 249 (728)
Q Consensus 170 w~~~~~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~v 249 (728)
|..-...+.....+.++++.+|+.+|+.+... +.+..+||+|+.+++.++|++|++.|++.||+|+|++.|+++|+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~----~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~ 84 (613)
T COG1022 9 WEDVAEIHTLPKRLAERVKDRPDGVALMYKEL----GGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWA 84 (613)
T ss_pred chhhhhcccHHHHHHHHhhcCCcceeEeeecC----CcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHH
Confidence 43333444555667788899999999987764 56789999999999999999999999977999999999999999
Q ss_pred HHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCC---cEEEEc---CCCC--
Q 004825 250 VIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAP---LAIVIP---AKGS-- 320 (728)
Q Consensus 250 va~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~---~~~~i~---~~~~-- 320 (728)
++.+||+.+|++.||++++.+++.++++|+++++++|+++..... ... .+....+. ....++ ....
T Consensus 85 i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (613)
T COG1022 85 IADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELL-----DLVLPVLEDCPKVVDLIVIIDLVREAVEAK 159 (613)
T ss_pred HHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHH-----HHHHhhhccccchhhhhhhhhhhhhccchh
Confidence 999999999999999999999999999999999999999984321 111 11111110 000000 0000
Q ss_pred Cccccc--CCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcC-CCCC
Q 004825 321 SFSMKL--RDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMD-IRKA 397 (728)
Q Consensus 321 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~ 397 (728)
...... ..+...+ .+.. ........+..++|+|.|+|||||||.|||||++|+|++..+......+. ++++
T Consensus 160 ~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~ 233 (613)
T COG1022 160 ALVLEVFPDEGISLF-LIDS-----AGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPG 233 (613)
T ss_pred hccccccccccchhh-hhcc-----cccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCC
Confidence 000000 0001111 0100 01111224567899999999999999999999999999999999999996 9999
Q ss_pred CEEEecCCcchhhhHH-HHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCC-------C-CC--
Q 004825 398 DIVAWPTNLGWMMGPW-LVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTN-------C-ID-- 466 (728)
Q Consensus 398 d~~l~~~~~~~~~~~~-~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~-------~-~~-- 466 (728)
|++++++|++|.+... .....+..|+++... .++..+++.+++.++|+++.+|.+|+.+.+.. . ..
T Consensus 234 d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~---~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~ 310 (613)
T COG1022 234 DRVLSFLPLAHIFERAFEGGLALYGGVTVLFK---EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRK 310 (613)
T ss_pred cEEEEeCcHHHHHHHHHHHHHHhhcceEEEec---CCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHH
Confidence 9999999999999885 454555555555543 35678999999999999999999999875420 0 00
Q ss_pred ---------------------------------------CCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEeccccc
Q 004825 467 ---------------------------------------GYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGT 507 (728)
Q Consensus 467 ---------------------------------------~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~T 507 (728)
... .++|.+++||.++++++..+++.. ++++.++||.|
T Consensus 311 if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lG-gri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlT 387 (613)
T COG1022 311 LFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALG-GRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLT 387 (613)
T ss_pred HHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhC-CcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEeccc
Confidence 011 378999999999999999888764 49999999999
Q ss_pred ccccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEecc-ccCCCccccCccccccccccCCCCC
Q 004825 508 EIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPL-IFGASSTLLNANHYDVYFSGMPSRN 586 (728)
Q Consensus 508 E~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~-~~~~~~~~~~~~~~~~~f~~~p~~~ 586 (728)
||+...+...+. ....+++|+|+|+++++|.|+ |||+|.++ .+.+ ||++|+.|++.|..+
T Consensus 388 Ets~~~~v~~~~-~~~~gtvG~p~p~~evKI~d~------------GEilVRG~~Vm~G--Yyk~pe~Taeaf~~D---- 448 (613)
T COG1022 388 ETSAVVSVNPPD-RFVLGTVGKPLPGIEVKIADD------------GEILVRGPNVMKG--YYKNPEATAEAFTED---- 448 (613)
T ss_pred ccccceEEcccc-CcccCCcCCcCCCceEEEccC------------ceEEEecchhcch--hcCChHHHhhhcccc----
Confidence 999877766553 356788999999999999993 99999554 4443 688999999999864
Q ss_pred CceeEEeCceEEEecCceEEEEcccCCeeec-CceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCC
Q 004825 587 GQILRRHGDVFERTSGGYYRAHGRADDTMNL-GGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDS 665 (728)
Q Consensus 587 g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki-~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~ 665 (728)
| ||+|||+|.++++|+|.++||++|.||. +|++|.|+.||+.+ +.+|.|.+++|++ ++. ..+.|.|++...
T Consensus 449 G--Wf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l-~~~~~I~qi~vvg-~~k----~~~~AlIvp~~~ 520 (613)
T COG1022 449 G--WFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKL-AKSPLIEQICVVG-DDK----KFLVALIVPDFD 520 (613)
T ss_pred C--CcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHH-hcCCCeeEEEEEe-cCC----cceEEEEeCCHH
Confidence 4 9999999999999999999999999997 99999999999999 5999999999998 321 579999987641
Q ss_pred CC----------CCCCHH------HHHHHHHHHHHh---hCCCCcccceEEECC-CCC-----CCCCCchhHHHHHHHHH
Q 004825 666 NY----------TPPDLN------QLRMSFNSAVQK---KLNPLFKVSHVVPLP-SLP-----RTATNKVMRRVLRKQLA 720 (728)
Q Consensus 666 ~~----------~~~~~~------~l~~~l~~~l~~---~Lp~~~~P~~i~~v~-~lP-----~t~~GKvdR~~L~~~~~ 720 (728)
.. ...+.. ++++.+...+.. .+..+..+..++.++ ++. +|++-|+.|..+.+.++
T Consensus 521 ~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~ 600 (613)
T COG1022 521 ALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYK 600 (613)
T ss_pred HHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhh
Confidence 00 001121 223333222222 233334444555543 233 78899999999888776
Q ss_pred h
Q 004825 721 Q 721 (728)
Q Consensus 721 ~ 721 (728)
.
T Consensus 601 ~ 601 (613)
T COG1022 601 D 601 (613)
T ss_pred h
Confidence 5
No 115
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1e-54 Score=467.52 Aligned_cols=519 Identities=17% Similarity=0.145 Sum_probs=392.7
Q ss_pred chHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Q 004825 176 VNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAI 255 (728)
Q Consensus 176 ~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~ 255 (728)
..++++.|.+-+...|+.+++-+.......+.+..+||.|..+++.++|..|++.|+++++.|||+.-|++||+++++||
T Consensus 74 ~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a~ 153 (691)
T KOG1256|consen 74 PLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMAC 153 (691)
T ss_pred cccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHHH
Confidence 34567889999999999999988764334577899999999999999999999999999999999999999999999999
Q ss_pred HHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhh--cCCcEEEEcCCCCCcc-cccC----
Q 004825 256 VLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDA--QAPLAIVIPAKGSSFS-MKLR---- 327 (728)
Q Consensus 256 lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~--~~~~~~~i~~~~~~~~-~~~~---- 327 (728)
...|++.|||...++++.+.+|++++.+.++|+++.. ..... +.... .+....++.-...... ....
T Consensus 154 ~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~-----k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~g 228 (691)
T KOG1256|consen 154 YAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAK-----KAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNG 228 (691)
T ss_pred HhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHH-----HHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCC
Confidence 9999999999999999999999999999999999642 11111 22221 2323333322221110 1111
Q ss_pred CCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHH--Hh----cCCCCCCEEE
Q 004825 328 DGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAW--CH----MDIRKADIVA 401 (728)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~--~~----~~~~~~d~~l 401 (728)
-...+|+++...+... ..... .+..|+++|.|+|||||||.|||||+||+|++..+.... .. ......|+++
T Consensus 229 v~v~S~~e~~~lG~~~-~~~~~-~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~l 306 (691)
T KOG1256|consen 229 VEVYSWDEFEELGKKN-QRKPR-VPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYL 306 (691)
T ss_pred eEEEEHHHHHhhcccc-cCCCC-CCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEE
Confidence 1267899999988642 22222 577899999999999999999999999999988654311 11 1223469999
Q ss_pred ecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC-----------------
Q 004825 402 WPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC----------------- 464 (728)
Q Consensus 402 ~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~----------------- 464 (728)
+++|++|++-...-...+..|+++.+..+ |+..+.+.|++.++|++.++|.+|+++.....
T Consensus 307 SyLPLAHi~er~~~~~~~~~G~~IgF~~g--D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A 384 (691)
T KOG1256|consen 307 SYLPLAHIFERVVELYTFYIGAKIGFARG--DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFA 384 (691)
T ss_pred EeCcHHHHHHHHHHHhHhhcccEEEEecC--ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 99999999998655566699999999985 56778888999999999999999998744200
Q ss_pred ---------CCCCCC-------------------cCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccC
Q 004825 465 ---------IDGYDW-------------------SSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITG 516 (728)
Q Consensus 465 ---------~~~~~l-------------------~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~ 516 (728)
..+... .++|.+++|+.|+++++...++..+ +++++++||.|||++..+..
T Consensus 385 ~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~ 463 (691)
T KOG1256|consen 385 MAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLT 463 (691)
T ss_pred HHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEec
Confidence 000000 3689999999999999999888776 49999999999999665555
Q ss_pred CcccccccccccCCCCCceEEEEcC-CCCccCCCCCceeEEEEecc-ccCCCccccCccccccccccCCCCCCceeEEeC
Q 004825 517 SLLQAQSLAAFSTPAMGCKLFILGN-DGCPIPQNVPGMGELALSPL-IFGASSTLLNANHYDVYFSGMPSRNGQILRRHG 594 (728)
Q Consensus 517 ~~~~~~~~~~iG~p~~~~~v~i~d~-~g~~vp~g~~giGEl~v~~~-~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TG 594 (728)
.+.+. ..+++|.|+|+++++++|. +.+.-+.|.. |||||.|. .+.+ ||.+++.|++.|..+ | |++||
T Consensus 464 ~~~d~-~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~--GEIcirG~~Vf~G--YyK~p~~T~e~ideD----G--WLhTG 532 (691)
T KOG1256|consen 464 LPGDN-VLGSVGPPVPGNEVKLVDVPEMNYDADGSK--GEICVRGPNVFMG--YYKDPEKTAEAIDED----G--WLHTG 532 (691)
T ss_pred cCCCC-CCCCcCCcccCceEEEechHHhCcCcCCCc--ceEEEecchhcee--ccCChHHHhhhhccc----c--ccccc
Confidence 55443 6789999999999999884 3444555554 99999554 4443 688999999999754 4 99999
Q ss_pred ceEEEecCceEEEEcccCCeeec-CceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCC----
Q 004825 595 DVFERTSGGYYRAHGRADDTMNL-GGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTP---- 669 (728)
Q Consensus 595 Dl~~~~~dG~l~~~GR~d~~iki-~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~---- 669 (728)
|+|+|+++|.|.+.||+++.+|. +|++|.|+.||++.. ..+-|.+.+|.+-... ..|+|.|+++. ....
T Consensus 533 DiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~-~~~~V~qi~V~g~s~~----~~LvaiVvpd~-e~~~~~a~ 606 (691)
T KOG1256|consen 533 DIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYK-RSLPVQQIFVLGDSLR----SFLVAIVVPDP-EVLKSWAA 606 (691)
T ss_pred cceeECCCccEEEEecccceEEcCCCCccChHHHHHHHh-cCCceEEEEEECCcch----hcEEEEEecCh-hhchhhHH
Confidence 99999999999999999999997 999999999999995 7788999888874322 68999999865 2101
Q ss_pred -----CCHHH------HHHHHHHHH-----HhhCCCCcccceEEE------CCCCCCCCCCchhHHHHHHHHHh
Q 004825 670 -----PDLNQ------LRMSFNSAV-----QKKLNPLFKVSHVVP------LPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 670 -----~~~~~------l~~~l~~~l-----~~~Lp~~~~P~~i~~------v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
.+.++ +++.+.+.+ ...|..+.....+.. ++.=-+||+=|+.|..|.+.|++
T Consensus 607 ~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~ 680 (691)
T KOG1256|consen 607 KDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKK 680 (691)
T ss_pred HccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHH
Confidence 11111 122222222 123444444445554 23334789999999999999876
No 116
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=6.7e-54 Score=471.43 Aligned_cols=401 Identities=24% Similarity=0.282 Sum_probs=311.2
Q ss_pred cccccCCCCCCeEEEE-eccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcE
Q 004825 183 LSVNSKRSLDDIVIRW-CDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYI 261 (728)
Q Consensus 183 l~~~~~~~pd~~Al~~-~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~ 261 (728)
|+++|+++||++|+++ ... ++||+||+++++++|..|+++|+++|++|+|+++|+.++++++|||+++|++
T Consensus 1 f~~~a~~~pd~~a~~~~~~~--------~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~ 72 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGR--------SLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAI 72 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTE--------EEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-E
T ss_pred ChhHHhhCCCceEEEECCCE--------EEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccc
Confidence 4567889999999999 444 9999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhc--CCcEEEEcCCCCCcccccCCCCcCHHHHHH
Q 004825 262 VVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQ--APLAIVIPAKGSSFSMKLRDGDISWLDFLE 338 (728)
Q Consensus 262 ~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 338 (728)
++|++|.++.+++.++++.+++++||+ .+...... +... ...... ......++.... .....+..
T Consensus 73 ~v~l~~~~~~~~~~~~l~~~~~~~ii~-~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 140 (417)
T PF00501_consen 73 PVPLDPSLSEDELRHILRQSGPKVIIT-SEAVDSEP-LKKLKSIFKQEDPSSSIIILDRDDL----------PKKEALKS 140 (417)
T ss_dssp EEEEETTSSHHHHHHHHHHHTESEEEE-CHHHSCHH-HHHHHHHHTTSTTTEEEEEESHSSC----------TTCHHHHH
T ss_pred ccccccccccccccccccccceeEEEE-eccccccc-cccchhhhccccccccccccccccc----------cccccccc
Confidence 999999999999999999999999998 20000000 1101 111111 122333332111 11111111
Q ss_pred hhhccccCcccccc-CCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHH--HhcCCCCCCEEEecCCcchhhhH-HH
Q 004825 339 RVRKLKENEFAAVE-QPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAW--CHMDIRKADIVAWPTNLGWMMGP-WL 414 (728)
Q Consensus 339 ~~~~~~~~~~~~~~-~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~-~~ 414 (728)
.... . ... .. ..++++++++|||||||.||+|.++|+++++.+.... ..++++ |++++..|++|.+++ ..
T Consensus 141 ~~~~-~--~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~ 214 (417)
T PF00501_consen 141 ASLS-D--EPQ-SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISA 214 (417)
T ss_dssp HHHC-H--CSH-STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHH
T ss_pred cccc-c--ccc-cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeecccccccccccc
Confidence 1110 0 000 00 0569999999999999999999999999999877754 223334 699999999999999 88
Q ss_pred HHHHhhhCcEEEEeCCCCC--cchHHHHHHHhCCcEEEecHHHHHHHHcCCCCC----CCCCcCeeEEEeecCCCCHHHH
Q 004825 415 VYASLLNGASIALYNGSPL--GSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCID----GYDWSSIRCFGSTGEASNVDEY 488 (728)
Q Consensus 415 ~~~~L~~G~~lvl~~~~~~--~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~----~~~l~~lr~i~~gGe~l~~~~~ 488 (728)
++.++..|+++++++.... +..+++.|+++++|++.++|+++..|++..... ..++++||.+++||+++++++.
T Consensus 215 ~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~ 294 (417)
T PF00501_consen 215 LLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLL 294 (417)
T ss_dssp HHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHH
T ss_pred ccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhc
Confidence 9999999999999986432 456889999999999999999999998742221 3468899999999999999999
Q ss_pred HHHHhccCCCCeEecccccccccccccCC-cccccccccccCCCCCceEEEEcCC-CCccCCCCCceeEEEEeccccCCC
Q 004825 489 LWLMGRALYKPVIEYCGGTEIGGGFITGS-LLQAQSLAAFSTPAMGCKLFILGND-GCPIPQNVPGMGELALSPLIFGAS 566 (728)
Q Consensus 489 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~-~~~~~~~~~iG~p~~~~~v~i~d~~-g~~vp~g~~giGEl~v~~~~~~~~ 566 (728)
+++.+.++.+++++.||+||++..++... ........++|.|++|++++|+|++ +++++.|+. |||+|.+..+..+
T Consensus 295 ~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~--Gei~i~~~~~~~g 372 (417)
T PF00501_consen 295 RRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEP--GEIVIRGPNVFSG 372 (417)
T ss_dssp HHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSE--EEEEEESTTSBSE
T ss_pred cccccccccccceecccccccceeeeccccccccccccccccccccccccccccccccccccccc--ccccccCCcccee
Confidence 99999887568999999999998765442 2222356789999999999999998 999999986 9999977765432
Q ss_pred ccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecC
Q 004825 567 STLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLG 618 (728)
Q Consensus 567 ~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~ 618 (728)
|+.+++.+++.|.. +| ||+|||+|++|+||.|+++||.||+||+|
T Consensus 373 -y~~~~~~~~~~~~~----~~--~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 373 -YYNDPELTAEAFID----DG--WYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp -ETTBHHHHHHHEET----TS--EEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred -eecccccccccccc----cc--ceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 34566778887864 12 99999999999999999999999999986
No 117
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=2.5e-52 Score=430.36 Aligned_cols=512 Identities=19% Similarity=0.176 Sum_probs=395.5
Q ss_pred hHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Q 004825 177 NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIV 256 (728)
Q Consensus 177 ~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~l 256 (728)
....++|.++++++|+++|+++.+.. +++||+|++++++++|+.|...|++.||.||++|+|+++++..+||.+
T Consensus 77 ~ti~~~F~~~vrr~p~k~aii~~~~~------~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLa 150 (649)
T KOG1179|consen 77 RTIAELFLSQVRRQPDKPAIIYEGPF------QSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLA 150 (649)
T ss_pred CcHHHHHHHHHHhCCCccEEEEeCCC------ceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHH
Confidence 34567788899999999999998852 399999999999999999999999999999999999999999999999
Q ss_pred HcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcC-CcEEEEcCCCCCcccccCCCCcCHHH
Q 004825 257 LAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQA-PLAIVIPAKGSSFSMKLRDGDISWLD 335 (728)
Q Consensus 257 kaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~ 335 (728)
|+|++...|+++...+-|.+-|+-++++++|++.+...... ++.+... ..+.+....... ..++..++.+
T Consensus 151 KlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~-----e~~~~l~~~~i~~~~~~~~~----~~~g~~~L~~ 221 (649)
T KOG1179|consen 151 KLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALE-----EILPLLIKNGIHVFSLGPTS----VPDGIESLLA 221 (649)
T ss_pred hhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHH-----hcchhhhhccceEEecCCCC----CCchHHHHHH
Confidence 99999999999999999999999999999999986542111 1111111 112222111110 1122222333
Q ss_pred HHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH-HH
Q 004825 336 FLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP-WL 414 (728)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~ 414 (728)
.++.....+.+..........++++.||||||||.||..+++|.-...........++++++|+++...|++|.++. ..
T Consensus 222 ~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilG 301 (649)
T KOG1179|consen 222 KLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILG 301 (649)
T ss_pred hhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHH
Confidence 33322221111123345567889999999999999999999999887777766678999999999999999999987 68
Q ss_pred HHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhc
Q 004825 415 VYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGR 494 (728)
Q Consensus 415 ~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~ 494 (728)
+-++|..|+|+|+-.. ++...+|+...+++||++.-.--+++.|++.+......-..+|..+ |-.+.++.|+.+.++
T Consensus 302 i~~~l~~GaT~VlrkK-FSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~--GNGLR~diW~~Fv~R 378 (649)
T KOG1179|consen 302 IGGCLLHGATVVLRKK-FSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAY--GNGLRPDIWQQFVKR 378 (649)
T ss_pred HHHHHhcCceEEEecc-cchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEe--cCCCCchHHHHHHHH
Confidence 9999999999999754 6778999999999999999999999999999877666667788765 556779999999999
Q ss_pred cCCCCeEecccccccccccccCCcccccccccccC---------CC------CCceEEEEcCCCC--ccCCCCCceeEEE
Q 004825 495 ALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFST---------PA------MGCKLFILGNDGC--PIPQNVPGMGELA 557 (728)
Q Consensus 495 ~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~---------p~------~~~~v~i~d~~g~--~vp~g~~giGEl~ 557 (728)
|+..++.+.||+||..+..+... ...+.+|. |+ +.+.--|.|++|- +|++|++ |.++
T Consensus 379 Fg~~~IgE~YgaTEgn~~~~N~d----~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEp--GlLv 452 (649)
T KOG1179|consen 379 FGIIKIGEFYGATEGNSNLVNYD----GRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEP--GLLV 452 (649)
T ss_pred cCCCeEEEEeccccCcceeeeec----CccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCC--ceEE
Confidence 98888999999999876433221 12222332 11 1112223445553 5789998 7554
Q ss_pred E---eccccCCCccccC-ccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhc
Q 004825 558 L---SPLIFGASSTLLN-ANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNA 633 (728)
Q Consensus 558 v---~~~~~~~~~~~~~-~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~ 633 (728)
- .........+|.+ .+.|+.+...|-+..|+.||.|||+-.+|+.|+++|..|..|.+.-.|+||+..|||.+| .
T Consensus 453 ~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l-~ 531 (649)
T KOG1179|consen 453 GKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVL-S 531 (649)
T ss_pred EEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHH-h
Confidence 2 2222111223444 778888999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHH
Q 004825 634 VDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRR 713 (728)
Q Consensus 634 ~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~ 713 (728)
...++.|+.|.++.-+......=.|.|+..+ +. +.+.+ .+-+++++.||+|.+|..+.+.++|++|.+=|..+.
T Consensus 532 ~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p-~~-~~d~~----~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~ 605 (649)
T KOG1179|consen 532 ALDFLQDVNVYGVTVPGYEGRAGMAAIVLDP-TT-EKDLE----KLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKT 605 (649)
T ss_pred hhccccceeEEEEecCCccCccceEEEEecC-cc-cchHH----HHHHHHHhhCccccchHHHHHHhhhhcccchhhHHH
Confidence 8999999999998766543245566666555 33 34444 455579999999999999999999999999999999
Q ss_pred HHHHHH
Q 004825 714 VLRKQL 719 (728)
Q Consensus 714 ~L~~~~ 719 (728)
.|.+.-
T Consensus 606 ~L~~eg 611 (649)
T KOG1179|consen 606 ELQKEG 611 (649)
T ss_pred HHHHcc
Confidence 998754
No 118
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=7e-52 Score=424.89 Aligned_cols=495 Identities=18% Similarity=0.166 Sum_probs=373.7
Q ss_pred CceeecHHHHHHHHHHHHHHHHHcCCCCCCE-EEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceE
Q 004825 207 PVKSMTLKELRAEVWLVAYALNALGLDKGSA-IAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKA 285 (728)
Q Consensus 207 ~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~-Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~ 285 (728)
...-+||.|+.+++.++|+.|.+.|++++++ |+|+++.+.+|+++.+||++.+...|-+...+..+.+.+-|+.++++.
T Consensus 86 ~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~ 165 (678)
T KOG1180|consen 86 DYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTA 165 (678)
T ss_pred ceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceE
Confidence 3468999999999999999999999998776 999999999999999999999999999999999999999999999999
Q ss_pred EEEecceecCCcccchH-hhHhhcCCc--EEEEcCCCCCc-cccc------CCCCcCHHHHHHhhhccccCccccccCCC
Q 004825 286 IFTQDLIIRGDKSIPLY-RVIDAQAPL--AIVIPAKGSSF-SMKL------RDGDISWLDFLERVRKLKENEFAAVEQPV 355 (728)
Q Consensus 286 il~~~~~~~~~~~~~~~-~~~~~~~~~--~~~i~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (728)
|+|+...+ +.. ..+...... ++.++..+... .... .-..++++++++.+.... .++.+..|
T Consensus 166 i~T~~~LL------~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~---~~~~~P~p 236 (678)
T KOG1180|consen 166 IFTDSELL------PKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE---IPPHPPKP 236 (678)
T ss_pred EEeCHHHH------HHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC---CCCCCCCC
Confidence 99998654 222 223333332 33333211111 1111 123477888888876522 33444478
Q ss_pred CCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhc-CCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCc
Q 004825 356 EAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHM-DIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLG 434 (728)
Q Consensus 356 ~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~ 434 (728)
+|+|+|||||||||.|||||++|+|+++.+....... .+.+.|+++.++|+.|..-+..=+.++..|+++=..+.....
T Consensus 237 ~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLt 316 (678)
T KOG1180|consen 237 SDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLT 316 (678)
T ss_pred CceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceec
Confidence 9999999999999999999999999999888777665 789999999999999999985445888999887654322111
Q ss_pred c-------hHHHHHHHhCCcEEEecHHHHHHHHcCCC-------------------------C-CCC-------------
Q 004825 435 S-------GFAKFVQDAKVTMLGVVPSIVRTWKSTNC-------------------------I-DGY------------- 468 (728)
Q Consensus 435 ~-------~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~-------------------------~-~~~------------- 468 (728)
+ .---.+...++|++.++|.+|.++.+... . ...
T Consensus 317 dts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKI 396 (678)
T KOG1180|consen 317 DTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKI 396 (678)
T ss_pred ccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHH
Confidence 1 11224677899999999999998754300 0 000
Q ss_pred ---CCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccccccccccCCCCCceEEEEc-CCCC
Q 004825 469 ---DWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILG-NDGC 544 (728)
Q Consensus 469 ---~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d-~~g~ 544 (728)
-=-.||.+++||.+++++..+.+.-.+ .+++..+||.||++...+...+.+ ...+.+|.|++.++++++| ++|-
T Consensus 397 r~~lGG~lR~~LsGGapLS~dtQrF~nic~-C~Pv~qGYGLTEtca~~tv~e~~d-~~~g~vG~pl~c~eiKLvdw~EgG 474 (678)
T KOG1180|consen 397 RALLGGNLRYILSGGAPLSPDTQRFMNICF-CCPVLQGYGLTETCAAATVLEPED-FSTGRVGAPLPCCEIKLVDWEEGG 474 (678)
T ss_pred HHHhCCceEEEEeCCCCCCHHHHHHHHHhc-cccccccccccchhcccEecChhh-cccccccCCccceEEEEEEhhhcC
Confidence 002699999999999999977766544 369999999999998776666533 4457899999999999999 3333
Q ss_pred ccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEecCceEEEEcccCCeeec-Cceeec
Q 004825 545 PIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSGGYYRAHGRADDTMNL-GGIKVS 623 (728)
Q Consensus 545 ~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki-~G~ri~ 623 (728)
-.+.+.|-.|||+|+|..+.. .||+|++.|++.|.. .+|.|||+|||+|++.+||.|.++.|++|.||. +|+.|.
T Consensus 475 Y~~~~~PPrGEI~i~G~~vt~-gY~kn~ekT~e~ft~---~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIs 550 (678)
T KOG1180|consen 475 YFAKNKPPRGEILIGGPNVTM-GYYKNEEKTKEDFTV---EDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYIS 550 (678)
T ss_pred ccCCCCCCCceEEecCCccCh-hhhCChhhhhhhcee---cCCcEEEeccccceecCCCcEEEeechhhhhhhcccceee
Confidence 333222223999997776654 368899999999986 469999999999999999999999999999997 999999
Q ss_pred HHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCC---------CCCCCCHH------HHHH----HHHHH-H
Q 004825 624 SVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDS---------NYTPPDLN------QLRM----SFNSA-V 683 (728)
Q Consensus 624 ~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~---------~~~~~~~~------~l~~----~l~~~-l 683 (728)
++-||+++. ..|-|...+|.+- ... ..++++||+... |....+-+ .+++ .|.++ -
T Consensus 551 L~KvEa~l~-s~p~V~NICvyAd--~~~--s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak 625 (678)
T KOG1180|consen 551 LGKVEAALR-SSPYVDNICVYAD--SNK--SKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAK 625 (678)
T ss_pred hHHHHHHHh-cCcchhheEEecc--ccc--ceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHH
Confidence 999999995 9999999888873 333 589999998751 11011111 1222 22222 2
Q ss_pred HhhCCCCcccceEEECCCC--C----CCCCCchhHHHHHHHHHh
Q 004825 684 QKKLNPLFKVSHVVPLPSL--P----RTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 684 ~~~Lp~~~~P~~i~~v~~l--P----~t~~GKvdR~~L~~~~~~ 721 (728)
.++|....+|..|++.++- | .|..-|+.|+.+...+++
T Consensus 626 ~~~L~~iEip~~I~l~~e~WTPenGlvT~A~KLKRk~I~~~~k~ 669 (678)
T KOG1180|consen 626 SQKLERIEIPAKIVLSPEPWTPENGLVTAALKLKRKEILAAYKK 669 (678)
T ss_pred hcccccccccceeEecCCCcCCCccccHHHHHhhHHHHHHHHHH
Confidence 4578888999998888752 2 444559999999988875
No 119
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.2e-51 Score=450.12 Aligned_cols=399 Identities=21% Similarity=0.224 Sum_probs=330.1
Q ss_pred cHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEec
Q 004825 212 TLKELRAEVWLVAYALNA-LGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 212 TY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 290 (728)
||.||.++++++|++|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++++++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999988
Q ss_pred ceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCC
Q 004825 291 LIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGE 370 (728)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~ 370 (728)
......... ......+... +....... ...........++++++++|||||||.
T Consensus 81 ~~~~~~~~~---------~~~~~~~~~~--------------~~~~~~~~---~~~~~~~~~~~~~~~~~i~~TSGTtG~ 134 (408)
T TIGR01733 81 ALASRLAGL---------VLPIILVDPL--------------ELAALDDA---PAPPPPDAPSGPDDLAYVIYTSGSTGR 134 (408)
T ss_pred chhhhcccc---------CCceEEechh--------------hhhhcccc---cccccccCCCCCCCcEEEEEcCCCCCC
Confidence 643211111 1111111100 00000000 000011111457899999999999999
Q ss_pred CceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCC--cchHHHHHHHhCCcE
Q 004825 371 PKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPL--GSGFAKFVQDAKVTM 448 (728)
Q Consensus 371 PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~--~~~l~~~i~~~~vt~ 448 (728)
||+|.++|+++.+.+......+.++++|+++...|++|.++++.++.++..|++++++++... +..+.+.++++++|.
T Consensus 135 pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 214 (408)
T TIGR01733 135 PKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTV 214 (408)
T ss_pred CCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceE
Confidence 999999999999999888888999999999999999999999999999999999999876544 567889999999999
Q ss_pred EEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcc--ccc--cc
Q 004825 449 LGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLL--QAQ--SL 524 (728)
Q Consensus 449 l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~--~~~--~~ 524 (728)
+.++|++++.|++... ..+++||.+++||+++++++.+++.+.++++.+++.||+||++..++..... ... ..
T Consensus 215 l~~~p~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~ 291 (408)
T TIGR01733 215 LNLTPSLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESP 291 (408)
T ss_pred EEeCHHHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccc
Confidence 9999999999988653 4578999999999999999999999988778999999999998765422211 111 26
Q ss_pred ccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCC--CceeEEeCceEEEecC
Q 004825 525 AAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRN--GQILRRHGDVFERTSG 602 (728)
Q Consensus 525 ~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~--g~~~y~TGDl~~~~~d 602 (728)
.++|+|.++++++|+|+++++++.|+. |||+|.+..... .|+++++.+.+.|..+++.. |.+||+|||+|+++++
T Consensus 292 ~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gel~v~~~~~~~-gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~ 368 (408)
T TIGR01733 292 VPIGRPLANTRLYVLDDDLRPVPVGVV--GELYIGGPGVAR-GYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPD 368 (408)
T ss_pred cccCcccCCceEEEECCCCCCCCCCCc--eEEEecCccccc-cccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCC
Confidence 789999999999999999999999986 999996654433 24567788888888776543 4469999999999999
Q ss_pred ceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEE
Q 004825 603 GYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAA 643 (728)
Q Consensus 603 G~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~V 643 (728)
|.+++.||.||+|+++|++|+|.|||++|. .||.|.+|+|
T Consensus 369 g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~-~~~~v~~~~v 408 (408)
T TIGR01733 369 GNLEFLGRIDDQVKIRGYRIELGEIEAALL-RHPGVREAVV 408 (408)
T ss_pred CCEEEeeccCCEEEeCeEEechHHHHHHHh-cCcchhhhcC
Confidence 999999999999999999999999999996 9999999875
No 120
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-45 Score=396.63 Aligned_cols=322 Identities=20% Similarity=0.216 Sum_probs=262.7
Q ss_pred CCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEe--CC
Q 004825 353 QPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALY--NG 430 (728)
Q Consensus 353 ~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~--~~ 430 (728)
..+++++|++|||||||.||||+++|+++.+.+......+ ...++++...|++|..++..++.+++.|++++++ ..
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 3468999999999999999999999999988877665443 3567888999999999998888999999999884 34
Q ss_pred CCCcchHHHHHHHhC--CcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccc
Q 004825 431 SPLGSGFAKFVQDAK--VTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTE 508 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~--vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 508 (728)
..++..+++.+++++ +++...+|+.+..++.... ....++++|.+++||+++++++.+++.+ . ++++++.||+||
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~-~-~~~v~~~YG~TE 186 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAA-A-GINVVRTYGMSE 186 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHh-c-CCcEEecccCCc
Confidence 457788999999998 5667788998887766432 2345789999999999999999888775 3 589999999999
Q ss_pred cccccccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCc
Q 004825 509 IGGGFITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQ 588 (728)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~ 588 (728)
++..+ ...|+|++|++++|.| |||++.+..+..+ |+++++. . .|. .+|
T Consensus 187 ~~~~~-----------~~~G~~~~g~~v~i~~-------------Gei~v~g~~~~~g-Y~~~~~~-~-~~~----~~g- 234 (358)
T PRK07824 187 TSGGC-----------VYDGVPLDGVRVRVED-------------GRIALGGPTLAKG-YRNPVDP-D-PFA----EPG- 234 (358)
T ss_pred cCCCc-----------CcCceeCCCCEEEecC-------------CEEEEecCccccc-cCCCccc-c-ccc----CCC-
Confidence 87532 1358999999999842 8999866554432 2333332 1 222 123
Q ss_pred eeEEeCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCC
Q 004825 589 ILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYT 668 (728)
Q Consensus 589 ~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~ 668 (728)
||+|||+|++ .||.++++||.||+||++|++|+|.|||++|. .||+|.+|+|++.+++..| +.++++++... +.
T Consensus 235 -~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~vv~~~~~~~g-~~~~a~v~~~~-~~- 308 (358)
T PRK07824 235 -WFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALA-THPAVADCAVFGLPDDRLG-QRVVAAVVGDG-GP- 308 (358)
T ss_pred -ceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHH-hCCCcceEEEEecCCCCCc-eEEEEEEEeCC-CC-
Confidence 9999999999 89999999999999999999999999999995 9999999999999888777 88999998765 33
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHHh
Q 004825 669 PPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 669 ~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 721 (728)
....+ .|++++++.|+.|++|..|+++++||+|++||+||++|++++.+
T Consensus 309 ~~~~~----~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 309 APTLE----ALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred CcCHH----HHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 23444 45557888999999999999999999999999999999998864
No 121
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=2e-43 Score=421.54 Aligned_cols=490 Identities=13% Similarity=0.060 Sum_probs=345.7
Q ss_pred CCCCCCCcchHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH
Q 004825 168 GQWLPGAFVNPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVN 247 (728)
Q Consensus 168 ~~w~~~~~~~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~ 247 (728)
.+|+.-.......++|.+.++++|+++|+.+... .+.++.+||+|+.++++++|++|++.|+++||+|+|+++|+++
T Consensus 418 ~~~~~~~~~~Tl~dll~~~a~~~pd~~al~~~~~---~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~E 494 (1452)
T PTZ00297 418 REYNPLAGVRSLGEMWERSVTRHSTFRCLGQTSE---SGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRN 494 (1452)
T ss_pred hcCCCcccCCCHHHHHHHHHHHCCCCeEEEEecc---CCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH
Confidence 4566656566777888889999999999974311 1224589999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCCcEEEEcCCCC-C-ccc
Q 004825 248 SVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAPLAIVIPAKGS-S-FSM 324 (728)
Q Consensus 248 ~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~-~-~~~ 324 (728)
|+++.+||+++|+++||+++ +.+.+.+++++++++++|++..... .. .+....-..+++++.... . ...
T Consensus 495 wvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~------kl~~i~~~~Lr~IIv~d~~~~~~~~~~ 566 (1452)
T PTZ00297 495 IVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVA------AILTCRSRKLETVVYTHSFYDEDDHAV 566 (1452)
T ss_pred HHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHH------HHHhhcccCCcEEEEECCCcccccccc
Confidence 99999999999999999975 4678999999999999999864321 11 111111223444432100 0 000
Q ss_pred cc--CCCCcCHHHHHHhhhccccCccccccCCCCCceEEEe---cCCCCCCCceEEecCcHHHHHHHHHHHhc---CCCC
Q 004825 325 KL--RDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILF---SSGTTGEPKAIPWTNATPFKAAADAWCHM---DIRK 396 (728)
Q Consensus 325 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiy---TSGSTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~ 396 (728)
.. .....+|+++++.+... . ........+++++.|+| ||||||.||||++||+|++..+....... ...+
T Consensus 567 ~~~~~i~~~s~~~ll~~G~~~-~-~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~ 644 (1452)
T PTZ00297 567 ARDLNITLIPYEFVEQKGRLC-P-VPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFK 644 (1452)
T ss_pred cccCCcceeeHHHHHhcCccc-C-ccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCC
Confidence 00 01245688888765321 1 11123346889999996 99999999999999999999887765432 4567
Q ss_pred CCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCC----C-------
Q 004825 397 ADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNC----I------- 465 (728)
Q Consensus 397 ~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~----~------- 465 (728)
+|+++.++|++|.++....+.++..|+++.. .++..+++.|+++++|+++++|.+|+.+..... .
T Consensus 645 ~D~~Ls~LPLaHI~er~~~~~~l~~G~~I~~----~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~ 720 (1452)
T PTZ00297 645 KHLMVHFTPFAMLFNRVFVLGLFAHGSAVAT----VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSW 720 (1452)
T ss_pred CCEEEEechHHHHHHHHHHHHHHHcCCEEEe----CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 8999999999999987667788999999864 346789999999999999999999998754310 0
Q ss_pred ---------------CCCC---------------C-cCeeEEEeecC--CCCHHHHHHHHhccCCCCeEecccccccccc
Q 004825 466 ---------------DGYD---------------W-SSIRCFGSTGE--ASNVDEYLWLMGRALYKPVIEYCGGTEIGGG 512 (728)
Q Consensus 466 ---------------~~~~---------------l-~~lr~i~~gGe--~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~ 512 (728)
.... + .++|.+++||. +++..+. . +.++..+||.||+.
T Consensus 721 lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~-----~--~i~i~~g~glTE~~-- 791 (1452)
T PTZ00297 721 LFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL-----E--HISVCYVPCLREVF-- 791 (1452)
T ss_pred HHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh-----C--CceEEEecceEEee--
Confidence 0000 0 36899998873 4443321 1 36788899999953
Q ss_pred cccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEE
Q 004825 513 FITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRR 592 (728)
Q Consensus 513 ~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~ 592 (728)
+...+. .....|+|+||++++|.|....--..+ .|||+++. .++++.|++.+
T Consensus 792 -~~~~~~---~~~~~G~PlpgvEvKI~~~~E~~~~~~---~GEIlvr~--------~kdpe~T~e~~------------- 843 (1452)
T PTZ00297 792 -FLPSEG---VFCVDGTPAPSLQVDLEPFDEPSDGAG---IGQLVLAK--------KGEPRRTLPIA------------- 843 (1452)
T ss_pred -eecCCC---CcccCCeecCceEEEEcccccccCCCC---CCeEEEEE--------CCChHHHHHhh-------------
Confidence 222221 122349999999999986421101112 39999942 23566665421
Q ss_pred eCceEEEecCceEEEEcccCCeeec-CceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCC------
Q 004825 593 HGDVFERTSGGYYRAHGRADDTMNL-GGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDS------ 665 (728)
Q Consensus 593 TGDl~~~~~dG~l~~~GR~d~~iki-~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~------ 665 (728)
+.|++||+|.++||++|.||. +|++|.|+.||+.+ ..+|.|.+++|++-.. ..++|.|++...
T Consensus 844 ----~gW~~dG~L~IidRkKdlikls~GEyVaP~~IE~~l-~~sp~I~qi~V~Gd~~-----k~lvALVvpd~e~l~~~w 913 (1452)
T PTZ00297 844 ----AQWKRDRTLRLLGPPLGILLPVAYEYVIAAELERIF-SQSRYVNDIFLYADPS-----RPIIAIVSPNRDTVEFEW 913 (1452)
T ss_pred ----CcCccCCeEEEEeccccceECCCCcEEcHHHHHHHH-hcCCCccEEEEEecCC-----CceEEEEEeCHHHHHHHH
Confidence 234579999999999999997 99999999999999 5999999999998432 459999987631
Q ss_pred ----CCC-------CCCHHHHHH----HHHHH---HH--hhCCCCcccceEEECC-CC-----CCCCCCchhHHHHHHHH
Q 004825 666 ----NYT-------PPDLNQLRM----SFNSA---VQ--KKLNPLFKVSHVVPLP-SL-----PRTATNKVMRRVLRKQL 719 (728)
Q Consensus 666 ----~~~-------~~~~~~l~~----~l~~~---l~--~~Lp~~~~P~~i~~v~-~l-----P~t~~GKvdR~~L~~~~ 719 (728)
+.. ..+..++.+ .+.+. +. ..+..+.++..|.+++ .+ -+||+.|+.|+.+.+.+
T Consensus 914 a~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY 993 (1452)
T PTZ00297 914 RQSHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYF 993 (1452)
T ss_pred HHHcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHH
Confidence 100 012233322 12222 22 2256678887766654 45 48999999999999988
Q ss_pred Hh
Q 004825 720 AQ 721 (728)
Q Consensus 720 ~~ 721 (728)
++
T Consensus 994 ~~ 995 (1452)
T PTZ00297 994 SS 995 (1452)
T ss_pred HH
Confidence 76
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=8.5e-41 Score=357.62 Aligned_cols=289 Identities=18% Similarity=0.178 Sum_probs=229.0
Q ss_pred CCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCC--CCEEEecCCcchhhhH-HHHHHHhhhCcEEEEeCCCC
Q 004825 356 EAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRK--ADIVAWPTNLGWMMGP-WLVYASLLNGASIALYNGSP 432 (728)
Q Consensus 356 ~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~ 432 (728)
+..++++|||||||.||||+++|+++.+.+.+....++++. .|++++..|++|..+. +.++.++..|+++++.+. .
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~-~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAA-A 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCC-C
Confidence 55889999999999999999999999988877777777644 4689999999998886 678889999999998764 4
Q ss_pred CcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccc
Q 004825 433 LGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGG 512 (728)
Q Consensus 433 ~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~ 512 (728)
++..+++.++. .|++.++|++++.+.+.. .++++++. ++||+++++++++++.+. +...+++.||+||++++
T Consensus 174 ~~~~~l~~i~~--~t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i 245 (386)
T TIGR02372 174 PASGIMRHARP--GDLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGI 245 (386)
T ss_pred ChHHHHHhhcc--CCEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccccc
Confidence 55667776654 389999999999997642 34677876 688999999999988764 33468999999999864
Q ss_pred cccCCcccccccccccCCCCCceEEEEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEE
Q 004825 513 FITGSLLQAQSLAAFSTPAMGCKLFILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRR 592 (728)
Q Consensus 513 ~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~ 592 (728)
.+... +...|+|+|+.++.+ | ++ . +. .| ..|++
T Consensus 246 ~~~~~------~~~~~~~~p~~~~~~-~-~~------~----~~-------------------------g~----~~~~~ 278 (386)
T TIGR02372 246 GLREA------PDDPFRLLPDLACFA-D-TL------S----SA-------------------------GL----ARRLD 278 (386)
T ss_pred ccccC------CCCCcccCCCccccC-C-Cc------c----CC-------------------------Cc----cceee
Confidence 43221 123456666554432 1 00 0 00 00 12689
Q ss_pred eCceEEEecCceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCH
Q 004825 593 HGDVFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDL 672 (728)
Q Consensus 593 TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~ 672 (728)
|||+++|+++|+++|+||+||+||++|++|+|.|||++|. .||+|.+|+|+. .+ +++.|+|++++ +. +.
T Consensus 279 tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~-~~p~V~~~~v~~-----~g-~~~~a~vv~~~-~~---~~ 347 (386)
T TIGR02372 279 LQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILE-RNPRVRAAAVRL-----DG-RRLKAFIVVAE-DA---DE 347 (386)
T ss_pred cCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHH-cCCCceEEEEEc-----CC-ceEEEEEEECC-CC---Ch
Confidence 9999999999999999999999999999999999999995 999999998853 24 68999999876 33 33
Q ss_pred HHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchh
Q 004825 673 NQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVM 711 (728)
Q Consensus 673 ~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvd 711 (728)
..+.+.|+++++++||+|++|..+.++++||+|++||++
T Consensus 348 ~~~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 348 AELEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 445667888899999999999999999999999999985
No 123
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5e-40 Score=372.26 Aligned_cols=502 Identities=17% Similarity=0.105 Sum_probs=340.6
Q ss_pred hcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcE
Q 004825 182 CLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYI 261 (728)
Q Consensus 182 ~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~ 261 (728)
.+.+.+.+.|+.++..+-......+...++||++....+|.+++.|...|...|+.|++++.++.++++..++++++|..
T Consensus 41 ~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~ 120 (1032)
T KOG1178|consen 41 SFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLAAGLT 120 (1032)
T ss_pred HHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhhcceE
Confidence 35555666777777766544333455569999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCC----HHHHHHH---HHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHH
Q 004825 262 VVSIADSFA----SLEISAR---LRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWL 334 (728)
Q Consensus 262 ~vpl~p~~~----~~~l~~~---l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 334 (728)
++|+||++| ++++..+ +......++ ..+ ++.+... .+...+...... .
T Consensus 121 ~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~----------~~l---~i~~~~~--------~~~~~~~sv~~~----~ 175 (1032)
T KOG1178|consen 121 FLPIDPSWPNSELAGYLMRIAHFLTSVELEIV----------RRL---NIIDILL--------NSLFPKLSVETI----A 175 (1032)
T ss_pred EEEecCCCcccccchHHHhhhhhheeccceeh----------hhh---hhHHHHh--------hccccccchhhc----c
Confidence 999999999 3322211 111111110 001 1110000 000000000000 1
Q ss_pred HHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHH
Q 004825 335 DFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWL 414 (728)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 414 (728)
+....... ...........+++.+++.||||+||.||||.-+|..+++...|....+..+..+++-....++++.....
T Consensus 176 ~~f~~~~~-~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~ 254 (1032)
T KOG1178|consen 176 DSFQMVLH-NEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQK 254 (1032)
T ss_pred chhhhhhc-cCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchHH
Confidence 11111111 11122223455788999999999999999999999999999999999999999998866667777777765
Q ss_pred HHHHhhhCcEEEEeCCCC---CcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCC-------------CCCCcCeeEEEe
Q 004825 415 VYASLLNGASIALYNGSP---LGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCID-------------GYDWSSIRCFGS 478 (728)
Q Consensus 415 ~~~~L~~G~~lvl~~~~~---~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~-------------~~~l~~lr~i~~ 478 (728)
+..++++.+..++++... .+..+.+.+++++++.++.+|++.+.++...... ....+.|+...+
T Consensus 255 ~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~ 334 (1032)
T KOG1178|consen 255 FIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVL 334 (1032)
T ss_pred HHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeee
Confidence 555555555544444222 2578999999999999999999988887653221 112347999999
Q ss_pred ecCCCCHHHHHHHHhccCCCCeEecccccccccccccCCcccc--------cccccccCCC--CCceEEEEcCCCCccCC
Q 004825 479 TGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFITGSLLQA--------QSLAAFSTPA--MGCKLFILGNDGCPIPQ 548 (728)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~--------~~~~~iG~p~--~~~~v~i~d~~g~~vp~ 548 (728)
+||+....++..+...+.-.-...-|++++............. ....+.+.-+ +.+.+.+....|.+.+.
T Consensus 335 ~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 414 (1032)
T KOG1178|consen 335 GGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLYRAGGEGEG 414 (1032)
T ss_pred cCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeeeccCcccCC
Confidence 9999998887755544432223445888887764432211100 0000111001 12344555555666655
Q ss_pred CCCceeEEEEecccc-CCCccccCccccccccccCC-CC--CCceeEEeCceEEEecCceEEEEcccCCeeecCceeecH
Q 004825 549 NVPGMGELALSPLIF-GASSTLLNANHYDVYFSGMP-SR--NGQILRRHGDVFERTSGGYYRAHGRADDTMNLGGIKVSS 624 (728)
Q Consensus 549 g~~giGEl~v~~~~~-~~~~~~~~~~~~~~~f~~~p-~~--~g~~~y~TGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~ 624 (728)
++. -.+++.... +.... .+-.+.+.|.++. +. .-+|+|||||+||..++|.+++.||.|+|||+||+||++
T Consensus 415 ~v~---~~~l~~~~~~~~~~~--~g~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L 489 (1032)
T KOG1178|consen 415 GVG---KGCLGAEQNLSSWVV--DGYSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIEL 489 (1032)
T ss_pred ccc---ceeecccccccceee--ccccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEeh
Confidence 552 222222111 11100 1111222332222 12 236899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCC
Q 004825 625 VEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPR 704 (728)
Q Consensus 625 ~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~ 704 (728)
+||+.++. .||.|.++.+.+..+...+ +++++|++... +. ...+...|++++.++|+.||+|..+|.++++|+
T Consensus 490 ~ei~t~v~-~~p~v~~~itl~~~~~~~~-~~l~aFvv~~~-~~----~~~~~~~i~~~l~~~La~y~vPs~~V~l~~vPl 562 (1032)
T KOG1178|consen 490 GELNTVVE-VHPDVKEAITLARENSTVG-QTLLAFVVERG-GS----KSVLIRDIRNYLKKELASYMLPSLVVPLAKVPL 562 (1032)
T ss_pred hhhchhhc-cCcchhhhheeeeeccccC-ceEEEEEeccC-CC----CchhHHHHHHhhcccccceecceEEEEhhhCCc
Confidence 99999995 8899999999999888776 89999999876 33 222366788899999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHh
Q 004825 705 TATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 705 t~~GKvdR~~L~~~~~~ 721 (728)
|+|||||+++|.+...+
T Consensus 563 ~~~GKvDkkaL~~~~s~ 579 (1032)
T KOG1178|consen 563 NPNGKVDKKALLEYNSK 579 (1032)
T ss_pred CCCCCcChhhhhhhhhh
Confidence 99999999999994444
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=6e-36 Score=328.33 Aligned_cols=328 Identities=20% Similarity=0.187 Sum_probs=241.0
Q ss_pred CCCCCceEEEecCCCCCCCceEEecCcHHHHHHHH---HHHhcCCCCCCEEEecCCcchhhhH-HHHHHHhhhCcEEEEe
Q 004825 353 QPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAAD---AWCHMDIRKADIVAWPTNLGWMMGP-WLVYASLLNGASIALY 428 (728)
Q Consensus 353 ~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~ 428 (728)
.+.+++++++|||||||.||+|.++|.++...... ....++++++|+++...++++..+. ...+.++..|++++..
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 35578899999999999999999999987654332 2344688999999887766654443 3456788899999877
Q ss_pred CCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCC--CCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccc
Q 004825 429 NGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGY--DWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGG 506 (728)
Q Consensus 429 ~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~--~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~ 506 (728)
+.. ++..+++.|+++++|++.++|+++..|++.....+. ...++|.+++|||+++++..+++.+.++ ++++|.||+
T Consensus 152 ~~~-~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g-~~v~~~YG~ 229 (422)
T TIGR02155 152 SGG-QTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLG-MKATDIYGL 229 (422)
T ss_pred CCC-CHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhC-CceEecccc
Confidence 543 457899999999999999999999988765322222 2358999999999999999988887775 899999999
Q ss_pred cccccccccCCcccccccccccCCC--CCceEEEEcC-CCCccCCCCCceeEEEEeccccCCCccccCccccccccccCC
Q 004825 507 TEIGGGFITGSLLQAQSLAAFSTPA--MGCKLFILGN-DGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMP 583 (728)
Q Consensus 507 TE~~~~~~~~~~~~~~~~~~iG~p~--~~~~v~i~d~-~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p 583 (728)
||+++......... ...|.++ ++..++|+|+ +|+++|+|+. |||++++.. +..| |
T Consensus 230 tE~~~~~~~~~~~~----~~~g~~~~~~~~~~eivd~~~g~~v~~Ge~--Gelvvt~~~-------------~~~~---p 287 (422)
T TIGR02155 230 SEVIGPGVAMECVE----TQDGLHIWEDHFYPEIIDPHTGEVLPDGEE--GELVFTTLT-------------KEAL---P 287 (422)
T ss_pred hhhcCCceeecccc----cCCCceEecCeeEEEEECCCCCCCCCCCCe--eEEEEecCC-------------cccc---c
Confidence 99852111111100 0123333 3567789994 7999999987 999996421 1122 2
Q ss_pred CCCCceeEEeCceEEEecC-c-----eEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEE
Q 004825 584 SRNGQILRRHGDVFERTSG-G-----YYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLT 657 (728)
Q Consensus 584 ~~~g~~~y~TGDl~~~~~d-G-----~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~ 657 (728)
. .||+|||+++++++ | .+++.||.||+||++|.+|+|.|||.+|. .||+|.....+.+...... +.++
T Consensus 288 ~----~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~-~~~~v~~~~q~~~~~~~~~-~~~~ 361 (422)
T TIGR02155 288 V----IRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVIL-KMDELSPHYQLELTRNGHM-DELT 361 (422)
T ss_pred e----eeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHH-hCcCcCCCEEEEEEcCCCc-cEEE
Confidence 1 28999999999876 4 46899999999999999999999999995 8999984454555444333 5787
Q ss_pred EEEEecCCCCC----CCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHH
Q 004825 658 IVVVFKDSNYT----PPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRR 713 (728)
Q Consensus 658 a~vv~~~~~~~----~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~ 713 (728)
+.++... +.. ..+...+.+.|++.+++.+..++. ..++.+++||+|+ ||+.|.
T Consensus 362 ~~v~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 362 LKVELKP-ESYTLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEEEec-CcccccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 7777664 220 122345577888889888887642 3444567999988 999763
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=5.6e-29 Score=273.31 Aligned_cols=328 Identities=16% Similarity=0.065 Sum_probs=218.8
Q ss_pred CCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHH---hcCCCCCCEEEecCCcchhhhHHH-HHHHhhhCcEEEEe
Q 004825 353 QPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWC---HMDIRKADIVAWPTNLGWMMGPWL-VYASLLNGASIALY 428 (728)
Q Consensus 353 ~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~~~~~~~~~~~-~~~~L~~G~~lvl~ 428 (728)
.+.++++.+.|||||||.||+|.++|.++......... ..+++++|+++...++++..+.+. .++++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 45678899999999999999999999998766544433 358999999999999988877644 45667888886543
Q ss_pred CCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCC--CCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccc
Q 004825 429 NGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGY--DWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGG 506 (728)
Q Consensus 429 ~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~--~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~ 506 (728)
. . ....++.|+++++|++..+|+.+..|.+.....+. ..+++|.+++|||+++++..+++.+.+ +++++|.||+
T Consensus 163 ~-~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~ 238 (445)
T TIGR03335 163 G-K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGS 238 (445)
T ss_pred C-c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCCh
Confidence 2 2 24568899999999999999988877654222221 246899999999999999888887766 4899999999
Q ss_pred cccccccccCCcccccccccccCCCCCceEEEEcCC-CCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCC
Q 004825 507 TEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGND-GCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSR 585 (728)
Q Consensus 507 TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~-g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~ 585 (728)
||++... .+.. ......+-+.+.+.|+|++ ++++|+|+. |||+++...-.. ....--++
T Consensus 239 TE~~~~~-~c~~-----~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~--GELvvT~L~~~~-------~r~~~Pli----- 298 (445)
T TIGR03335 239 TEGTMCG-ECQA-----VAGLHVPEDLVHLDVYDPRHQRFLPDGEC--GRIVLTTLLKPG-------ERCGSLLI----- 298 (445)
T ss_pred hhhhheE-EecC-----CCCccccCCceEEEEEcCCCCCCCcCCCc--eEEEEEecCCCC-------ccCCceEE-----
Confidence 9986322 1111 0112223345789999987 567999987 999996543110 00000122
Q ss_pred CCceeEEeCceEEEec-C----c----eEEEEcccCCeeecCceeecHHHHHHHHhcCC---CCee-eeEEEeecCCCCC
Q 004825 586 NGQILRRHGDVFERTS-G----G----YYRAHGRADDTMNLGGIKVSSVEIERICNAVD---SNVL-ETAAIGVPPPDGG 652 (728)
Q Consensus 586 ~g~~~y~TGDl~~~~~-d----G----~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~---p~V~-~~~Vv~~~~~~~g 652 (728)
.|+|||++++.. + | .+...||.||+++++|.+|+|.+||++|. .+ +++. +..++...+. .+
T Consensus 299 ----RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~-~~~~~~~~~~~~~~~~~~~~-~~ 372 (445)
T TIGR03335 299 ----NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVF-QRENMDSLTGEYEAFLYGEE-EG 372 (445)
T ss_pred ----EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHh-ccCCCCCCCccEEEEEecCC-CC
Confidence 499999999742 2 3 24557999999999999999999999996 64 5554 2333332222 22
Q ss_pred ceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCC-------CCcccceEEE--CCCCCCCC-CCchhH
Q 004825 653 PEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLN-------PLFKVSHVVP--LPSLPRTA-TNKVMR 712 (728)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp-------~~~~P~~i~~--v~~lP~t~-~GKvdR 712 (728)
...+...+...+ +. ..+.+++.+.+.+.+...++ ...+...+.. -..||+++ .||..|
T Consensus 373 ~~~~~v~~e~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 373 EITLRVSLECED-KD-NCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred CceEEEEEEecC-cc-cchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 235555555544 22 12344555555444111121 1222333333 34799984 698765
No 126
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.95 E-value=1.1e-25 Score=247.22 Aligned_cols=516 Identities=14% Similarity=0.110 Sum_probs=339.4
Q ss_pred hHhhhhcccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHH
Q 004825 177 NPAKNCLSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNAL-GLDKGSAIAIDMPMNVNSVVIYLAI 255 (728)
Q Consensus 177 ~~~~~~l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-Gv~~gd~Vai~~~~s~~~vva~lA~ 255 (728)
-+.-++|...++++||.+|+..-+.. .....++||++|..+|.++|.+|... -+++||.|+++.+++.|++++++||
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~--~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~C 847 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNAR--GATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYAC 847 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccC--CcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHH
Confidence 34557788889999999999887653 34457999999999999999999987 6799999999999999999999999
Q ss_pred HHcCcEEEecCCCCC------HHHHHHHHHhcCceEEEEecceecCCcccchH-hhHhhcCCcEEEEcCCCCCcccccCC
Q 004825 256 VLAGYIVVSIADSFA------SLEISARLRISKAKAIFTQDLIIRGDKSIPLY-RVIDAQAPLAIVIPAKGSSFSMKLRD 328 (728)
Q Consensus 256 lkaG~~~vpl~p~~~------~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~ 328 (728)
+.+|.+.+|+.|-.. -..+..|++.+++++|+++.......+.-... .+....-+.+.+.+...
T Consensus 848 ly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~--------- 918 (1363)
T KOG3628|consen 848 LYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLP--------- 918 (1363)
T ss_pred HhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccc---------
Confidence 999999999988443 34678899999999999998543211111111 11111111111111100
Q ss_pred CCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcch
Q 004825 329 GDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGW 408 (728)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 408 (728)
.+|..-...... .....++.....+.+||+=+.--++|.--||..+|.++++.++.......+.+.--++.+.+.+-
T Consensus 919 --~t~~k~~~~~~k-~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~s 995 (1363)
T KOG3628|consen 919 --ETIRKRKKNIKK-LNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYS 995 (1363)
T ss_pred --hhhhhhhhhhhc-cCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCcc
Confidence 001111111110 11122233345688999999888999999999999999999999988888877776666666666
Q ss_pred hhhH-HHHHHHhhhCcEEEEeCCCC---CcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCC-------CCCcCeeEEE
Q 004825 409 MMGP-WLVYASLLNGASIALYNGSP---LGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDG-------YDWSSIRCFG 477 (728)
Q Consensus 409 ~~~~-~~~~~~L~~G~~lvl~~~~~---~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~-------~~l~~lr~i~ 477 (728)
..|+ ..++...++|...++.+... ++..|+..|++++|.-++.+=+.++.+...-.... .++++ ..++
T Consensus 996 Glgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~-s~vv 1074 (1363)
T KOG3628|consen 996 GLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSS-SIVV 1074 (1363)
T ss_pred chhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhccccc-ceee
Confidence 6665 56888999999988876432 56779999999999999999888888766533222 22222 3344
Q ss_pred eecCCCCHHHHHHHHhccC----CC-C-------------eEecccccccccccccCCcccccc-------------ccc
Q 004825 478 STGEASNVDEYLWLMGRAL----YK-P-------------VIEYCGGTEIGGGFITGSLLQAQS-------------LAA 526 (728)
Q Consensus 478 ~gGe~l~~~~~~~~~~~~~----~~-~-------------l~n~YG~TE~~~~~~~~~~~~~~~-------------~~~ 526 (728)
..-|+-...+..-+.+.+. .+ . ..+.|-..|-+....-........ ...
T Consensus 1075 ~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~d 1154 (1363)
T KOG3628|consen 1075 PAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYD 1154 (1363)
T ss_pred ecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCcccccc
Confidence 4444443444443333221 00 0 123343333332211100000000 112
Q ss_pred ccCCCCCceEEEEcCC-CCccCCCCCceeEEEEeccccCCCccccCcccccccccc---CCCCCCceeEEeCceEEEec-
Q 004825 527 FSTPAMGCKLFILGND-GCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSG---MPSRNGQILRRHGDVFERTS- 601 (728)
Q Consensus 527 iG~p~~~~~v~i~d~~-g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~---~p~~~g~~~y~TGDl~~~~~- 601 (728)
.|.-.+++++.|++++ -.+|..|+ .||||+.+..-...+....++.....|.. .....|..|-||||+|+...
T Consensus 1155 SG~~~~~~~i~IvnPEtk~pc~dge--~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t 1232 (1363)
T KOG3628|consen 1155 SGKLPVYTDIAIVNPETKGPCRDGE--LGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRT 1232 (1363)
T ss_pred CCcccccceeEEeCCccccccccCC--cceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeee
Confidence 3667789999999987 56788886 49999944322211111122222222221 11234667999999999742
Q ss_pred -----C----ceEEEEcccCCeeecCceeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCH
Q 004825 602 -----G----GYYRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDL 672 (728)
Q Consensus 602 -----d----G~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~ 672 (728)
. ..||++|-.++.+-++|.|.+|.+||..+.+.||.|.+|+|+.. . ..+|..+.... ....
T Consensus 1233 ~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~----~--glvVvviE~~g----q~~~ 1302 (1363)
T KOG3628|consen 1233 SLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQA----T--GLVVVVIECHG----QQEL 1302 (1363)
T ss_pred ecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEee----C--CeEEEEEEecC----chhH
Confidence 2 35899999999999999999999999999889999999999863 2 35666665554 2345
Q ss_pred HHHHHHHHHHHHhhCCCCcccceEEECCC--CCCCCCCchhHHHHHHHHHh
Q 004825 673 NQLRMSFNSAVQKKLNPLFKVSHVVPLPS--LPRTATNKVMRRVLRKQLAQ 721 (728)
Q Consensus 673 ~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~--lP~t~~GKvdR~~L~~~~~~ 721 (728)
.+|.-.|.+.+-++ ++.+-..+++++. +|+++.|...|..+++.+-.
T Consensus 1303 ~~LvPlIv~~vL~e--H~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~ 1351 (1363)
T KOG3628|consen 1303 ADLVPLIVNVVLEE--HYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLA 1351 (1363)
T ss_pred hhhhHHHHHHHHhh--cceEEEEEEEecCCccccCCchhhHHHHHHHHHHh
Confidence 55666554444332 2344466667764 99999999999998887654
No 127
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.93 E-value=7.1e-25 Score=217.45 Aligned_cols=221 Identities=19% Similarity=0.119 Sum_probs=161.8
Q ss_pred cccccCCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcE
Q 004825 183 LSVNSKRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNA-LGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYI 261 (728)
Q Consensus 183 l~~~~~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~ 261 (728)
|...++++|+++|+++.+.+ .+..+++||+||.++++++|+.|++ .|+++||+|+|+++|+++++++++|++++|++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~--~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v 79 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDA--TGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVE 79 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCC--CCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCE
Confidence 34456789999999864321 0012479999999999999999998 79999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCc--ccccCCCCcCHHHHHHh
Q 004825 262 VVSIADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSF--SMKLRDGDISWLDFLER 339 (728)
Q Consensus 262 ~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~ 339 (728)
++|++ +++++++|++........ ....++.+....... ......+..+|.+....
T Consensus 80 ~vp~n-------------~s~a~~~v~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (227)
T TIGR03089 80 VVLAG-------------DPDADVVVTGPDRLAAAA----------GSGEVVALSLDPLGRRVAGELPPGVIDFAPEVRV 136 (227)
T ss_pred EEeCC-------------CCCCCEEEeCcchhhhcc----------cCCceEEEeccccccCCCCCCCCcccchhhhhhc
Confidence 99995 789999999886543211 112223321100000 00001222345554432
Q ss_pred hhccccCccccc-cCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhH-HHHHH
Q 004825 340 VRKLKENEFAAV-EQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGP-WLVYA 417 (728)
Q Consensus 340 ~~~~~~~~~~~~-~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~ 417 (728)
.. ....+. ...++|+|.|+||||+ +|++++... ...+++++|+++ .+|++|..++ ..++.
T Consensus 137 ~~----~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~ 198 (227)
T TIGR03089 137 HG----DQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLA 198 (227)
T ss_pred cC----CCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHH
Confidence 11 111212 4567999999999985 666655543 456789999999 9999999998 57999
Q ss_pred HhhhCcEEEEeCCCCCcchHHHHHHHhCCc
Q 004825 418 SLLNGASIALYNGSPLGSGFAKFVQDAKVT 447 (728)
Q Consensus 418 ~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt 447 (728)
+|..|+++++.+ .+++..+++.|+++|||
T Consensus 199 ~l~~G~t~v~~~-rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 199 PLAAGGSLVLVT-HPDPARLDQIAETERVT 227 (227)
T ss_pred HhccCceEEEec-CCCHHHHHHHHHhhcCC
Confidence 999999999996 57999999999999997
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.92 E-value=5.6e-23 Score=213.92 Aligned_cols=326 Identities=23% Similarity=0.211 Sum_probs=228.2
Q ss_pred cCCCCCceEEEecCCCCCCCceEEecCcHHHHH---HHHHHHhcCCCCCCEEEecCCcchhhhH-HHHHHHhhhCcEEEE
Q 004825 352 EQPVEAFTNILFSSGTTGEPKAIPWTNATPFKA---AADAWCHMDIRKADIVAWPTNLGWMMGP-WLVYASLLNGASIAL 427 (728)
Q Consensus 352 ~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl 427 (728)
..+-++..+|--||||||+|+-+..+...+... +.......+...+|++..+..++...+- ..-+++--.|++++-
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 344566667888999999999999998765443 3333344688999998887776655544 444555556666543
Q ss_pred eCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCC--CCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEeccc
Q 004825 428 YNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDG--YDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCG 505 (728)
Q Consensus 428 ~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~--~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (728)
..+ ...+..+++|+++++|++.++|+.+..|.......+ ..-.+|+.+++|+|+++++..+.+.++++ +..++.||
T Consensus 166 ~~~-g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g-~~~~diYG 243 (438)
T COG1541 166 ISG-GNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFG-CKAFDIYG 243 (438)
T ss_pred cCC-ccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhC-Cceeeccc
Confidence 322 245678999999999999999999999987654442 33357999999999999999999988875 88999999
Q ss_pred cccccccc-ccCCcccccccccccCCCCCceEEEEcCC-CCccCCCCCceeEEEEeccccCCCccccCccccccccccCC
Q 004825 506 GTEIGGGF-ITGSLLQAQSLAAFSTPAMGCKLFILGND-GCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMP 583 (728)
Q Consensus 506 ~TE~~~~~-~~~~~~~~~~~~~iG~p~~~~~v~i~d~~-g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p 583 (728)
.||..+.. ..+... .-.-..-+...+.|+|++ |+++|.|+. |||+++...-.+ --++
T Consensus 244 ltE~~g~g~~eC~~~-----~glhi~eD~~~~Ei~dP~t~e~l~dge~--GelV~T~L~~~~-----------~PlI--- 302 (438)
T COG1541 244 LTEGFGPGAGECTER-----NGLHIWEDHFIFEIVDPETGEQLPDGER--GELVITTLTKEG-----------MPLI--- 302 (438)
T ss_pred cccccCCcccccccc-----cCCCcchhhceeeeecCCcCccCCCCCe--eEEEEEeccccC-----------cceE---
Confidence 99997652 111111 011234467889999965 999999986 999985432110 0122
Q ss_pred CCCCceeEEeCceEEEecC----ce-----EEEEcccCCeeecCceeecHHHHHHHHhcCCCCee-eeEEEeecCCCCCc
Q 004825 584 SRNGQILRRHGDVFERTSG----GY-----YRAHGRADDTMNLGGIKVSSVEIERICNAVDSNVL-ETAAIGVPPPDGGP 653 (728)
Q Consensus 584 ~~~g~~~y~TGDl~~~~~d----G~-----l~~~GR~d~~iki~G~ri~~~eIE~~l~~~~p~V~-~~~Vv~~~~~~~g~ 653 (728)
.|+|||+++..++ |. ..+.||.||+++++|.+|+|..||++|. +.+.+. +..++... .++.
T Consensus 303 ------RYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~-~~~~~~~~yqi~~~~--~~~~ 373 (438)
T COG1541 303 ------RYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLL-QIPEVTPHYQIILTR--NGGL 373 (438)
T ss_pred ------EEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHh-cccCCCceEEEEEec--CCCC
Confidence 4999999999763 32 3578999999999999999999999997 888888 55555554 2333
Q ss_pred eEEEEEEEecCCCCC-CCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhH
Q 004825 654 EQLTIVVVFKDSNYT-PPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMR 712 (728)
Q Consensus 654 ~~l~a~vv~~~~~~~-~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR 712 (728)
..|.+-|+..+ +.+ ..+...+.+.+...+...+.. -+--.++.+..+|+|- ||..|
T Consensus 374 d~L~V~vE~~~-~~~~~~~~~~~~~~l~~~~~~~~~~-~~~v~~v~~g~l~r~~-~K~kr 430 (438)
T COG1541 374 DELTVRVELEN-EAEELEDERRLAKKLIKNIKSELGV-RVEVELVEPGELPRTE-GKAKR 430 (438)
T ss_pred ceEEEEEEecC-cccchHHHHHHHHHHHHHHHhhcCC-ceEEEEEeccceeccc-CceeE
Confidence 68888888875 220 112222334555555555442 2223566677899995 46543
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=1.3e-20 Score=197.50 Aligned_cols=114 Identities=22% Similarity=0.247 Sum_probs=102.4
Q ss_pred eEEeCceEEE-ecCceEEEEcccCCeeecCc---eeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCC
Q 004825 590 LRRHGDVFER-TSGGYYRAHGRADDTMNLGG---IKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDS 665 (728)
Q Consensus 590 ~y~TGDl~~~-~~dG~l~~~GR~d~~iki~G---~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~ 665 (728)
||+|||+|++ |+||+++|.||.| +| ++|+|. ||++|. +||+|.+|+|++++++..| +.++|||++..
T Consensus 210 W~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~-~hp~V~eaaVvgvpd~~~g-e~v~A~Vv~~~- 280 (365)
T PRK09188 210 WLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALK-SDPAVSDVAIALFSLPAKG-VGLYAFVEAEL- 280 (365)
T ss_pred EEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHH-hCCCccEEEEEEEEcCCCC-eEEEEEEEECC-
Confidence 9999999998 6999999999998 88 799999 999995 9999999999999999888 89999999764
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCCCCCCCCCchhHHHHHHHHH
Q 004825 666 NYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPSLPRTATNKVMRRVLRKQLA 720 (728)
Q Consensus 666 ~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~ 720 (728)
..+.+++++ +++++||. |+|..++++++||+|+|||++|++|++.+.
T Consensus 281 ---~~~~~el~~----~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~ 327 (365)
T PRK09188 281 ---PADEKSLRA----RLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAM 327 (365)
T ss_pred ---CCCHHHHHH----HHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhh
Confidence 345555554 68888999 999999999999999999999999998864
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.71 E-value=2.9e-15 Score=161.00 Aligned_cols=257 Identities=15% Similarity=0.065 Sum_probs=161.1
Q ss_pred eEEEecCCCCCCCceEEecCcHHHHHHHHHH---HhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcE-EEEeCCCCCc
Q 004825 359 TNILFSSGTTGEPKAIPWTNATPFKAAADAW---CHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGAS-IALYNGSPLG 434 (728)
Q Consensus 359 a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~-lvl~~~~~~~ 434 (728)
..+..||||||+|-.+.++............ ...++..+++++.+. +..+ .++.++.+... +-.++-..+.
T Consensus 102 ~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~---~~~~--~ly~~~~~~~~~~~~~~l~~~~ 176 (430)
T TIGR02304 102 ISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFL---RADN--NLYQSVNNRWISLDFFDLLAPF 176 (430)
T ss_pred EEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEE---ccCh--hHHHHHHhccceeeecCCCcCH
Confidence 3567899999999999999876533222211 112556666665442 1110 12222222211 2333322345
Q ss_pred chHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhccCCCCeEecccccccccccc
Q 004825 435 SGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFI 514 (728)
Q Consensus 435 ~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~ 514 (728)
+..++.|++++++++.++|+.+..|++.......+ .+++.++++||.+++...+.+.+.++ +++++.||+|| +.+..
T Consensus 177 ~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg-~~V~~~YG~tE-g~la~ 253 (430)
T TIGR02304 177 QAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVFK-NTVHQIYQATE-GFLAS 253 (430)
T ss_pred HHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHhC-CCeeEccCCch-hheEE
Confidence 67899999999999999999999998764333333 46899999999999998888888775 89999999999 54322
Q ss_pred cCCcccccccccccCCCCCceEE--EEcCCCCccCCCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEE
Q 004825 515 TGSLLQAQSLAAFSTPAMGCKLF--ILGNDGCPIPQNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRR 592 (728)
Q Consensus 515 ~~~~~~~~~~~~iG~p~~~~~v~--i~d~~g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~ 592 (728)
.+.. +..-.--...-++ ++|+++++ ..+|+...-.. .-++ .|+
T Consensus 254 eC~~------g~lHl~ed~~~vE~~ivD~~~~~---------~~ViT~L~n~~-----------~PlI---------RYr 298 (430)
T TIGR02304 254 TCRC------GTLHLNEDLVHIEKQYLDEHKRF---------VPIITDFTRTT-----------QPIV---------RYR 298 (430)
T ss_pred ecCC------CCEEEccccEEEEeeEECCCCce---------EEEEecCCCcc-----------ceEE---------eee
Confidence 2211 0011111223344 78876643 33443322110 0122 499
Q ss_pred eCceEEEecC----ce----E-EEEcccCCeeec---Cc--eeecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEE
Q 004825 593 HGDVFERTSG----GY----Y-RAHGRADDTMNL---GG--IKVSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTI 658 (728)
Q Consensus 593 TGDl~~~~~d----G~----l-~~~GR~d~~iki---~G--~ri~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a 658 (728)
|||++++.++ |. | .+.||.||++++ +| ..|.|..|+.++....+.|.+..++... . ..+..
T Consensus 299 tGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~---~--~~l~v 373 (430)
T TIGR02304 299 LNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTG---S--AQLEL 373 (430)
T ss_pred CCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEcc---C--CeEEE
Confidence 9999998543 32 4 378999999985 34 4569999998865567889998776421 2 45666
Q ss_pred EEEec
Q 004825 659 VVVFK 663 (728)
Q Consensus 659 ~vv~~ 663 (728)
.++..
T Consensus 374 ~~~~~ 378 (430)
T TIGR02304 374 IADCE 378 (430)
T ss_pred EEEeC
Confidence 66653
No 131
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.57 E-value=5e-13 Score=148.59 Aligned_cols=490 Identities=14% Similarity=0.073 Sum_probs=296.4
Q ss_pred CCCCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCcEEEe
Q 004825 188 KRSLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAY-ALNALGLDKGSAIAIDMPMN--VNSVVIYLAIVLAGYIVVS 264 (728)
Q Consensus 188 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~-~L~~~Gv~~gd~Vai~~~~s--~~~vva~lA~lkaG~~~vp 264 (728)
..++-.+|.++-+..|. ..++||..+..|+.+.|+ .|-+-|.+++|+|.++...+ .+++++.++|.-.|.+.+|
T Consensus 105 nhs~~~ta~i~id~kgk---~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp 181 (1363)
T KOG3628|consen 105 NHSATSTAHICIDKKGK---ATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVP 181 (1363)
T ss_pred cCCCCCceEEEEcCCCc---eeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeecc
Confidence 56778899998887433 569999999999999999 66667999999999999876 6999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEecceecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccc
Q 004825 265 IADSFASLEISARLRISKAKAIFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLK 344 (728)
Q Consensus 265 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (728)
+.+.++.+++..+++-...+++++.....+........ ..+.....+|......+.. .
T Consensus 182 ~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~---------------------~s~~k~v~~w~t~~~k~~~-~ 239 (1363)
T KOG3628|consen 182 LSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSP---------------------VSLAKAVAWWKTNDFKGNY-T 239 (1363)
T ss_pred chhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCc---------------------ccHHHHHHhhhccccccee-e
Confidence 99999999999999999999999987654311111000 0000000000000000000 0
Q ss_pred cCccccccCCCCCceEEEecCCCCCCCceEEecCcHHHHHHHHH--------------------HHhcCCCCCCEEEecC
Q 004825 345 ENEFAAVEQPVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADA--------------------WCHMDIRKADIVAWPT 404 (728)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~--------------------~~~~~~~~~d~~l~~~ 404 (728)
-.....+..... .+||=||++++|.--||+.+|+ ++...+.. ...++....++++...
T Consensus 240 ~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~ 317 (1363)
T KOG3628|consen 240 KDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNL 317 (1363)
T ss_pred hhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeecc
Confidence 000011111122 7899999999999999999997 43322221 1123445566666555
Q ss_pred CcchhhhH-HHHHHHhhhCcEEEEeCCCC--CcchHHHHHHHhCCcEEEecHHHHHHHHcCC-----------CCCCCCC
Q 004825 405 NLGWMMGP-WLVYASLLNGASIALYNGSP--LGSGFAKFVQDAKVTMLGVVPSIVRTWKSTN-----------CIDGYDW 470 (728)
Q Consensus 405 ~~~~~~~~-~~~~~~L~~G~~lvl~~~~~--~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~-----------~~~~~~l 470 (728)
..+-..|+ +.++.+|++|.|.+.++... .+..+..++.+++.+++..--..++.....- .....++
T Consensus 318 ~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~ 397 (1363)
T KOG3628|consen 318 DPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDL 397 (1363)
T ss_pred CcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCc
Confidence 55555555 45889999999999988643 3456888899999999877655555432211 1123578
Q ss_pred cCeeEEEeecCCCCHHHHH----HHHhccCCCCeEecc-----------------cccccccccccCCccc---------
Q 004825 471 SSIRCFGSTGEASNVDEYL----WLMGRALYKPVIEYC-----------------GGTEIGGGFITGSLLQ--------- 520 (728)
Q Consensus 471 ~~lr~i~~gGe~l~~~~~~----~~~~~~~~~~l~n~Y-----------------G~TE~~~~~~~~~~~~--------- 520 (728)
+++|...+.-+.+..+..+ +|.+-.+....--.| +.+|.+....- .+..
T Consensus 398 sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r-~p~~~~~~~~~e~ 476 (1363)
T KOG3628|consen 398 SSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIR-RPEQMADTLPGEG 476 (1363)
T ss_pred cceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhccccc-CcccccccCccce
Confidence 8999999999998877432 333322211111111 11333321110 0000
Q ss_pred ----------------c-----cccccccCCCC-CceEEEEcCC-CCccCCCCCceeEEEEeccccCCCccccCcccccc
Q 004825 521 ----------------A-----QSLAAFSTPAM-GCKLFILGND-GCPIPQNVPGMGELALSPLIFGASSTLLNANHYDV 577 (728)
Q Consensus 521 ----------------~-----~~~~~iG~p~~-~~~v~i~d~~-g~~vp~g~~giGEl~v~~~~~~~~~~~~~~~~~~~ 577 (728)
. .....+|.-.+ .+.+.|++++ .+.|..++. |||||.....+..++ .-+..|..
T Consensus 477 ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eV--GEIwVsS~~~~~~~~-al~~~t~~ 553 (1363)
T KOG3628|consen 477 LLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEV--GEIWVSSNSLGKLFY-ALDKQTEN 553 (1363)
T ss_pred eeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcc--eeEEEecCCccccee-eccccccc
Confidence 0 00011222222 4566777766 678888875 999997666654432 22223333
Q ss_pred ccccCC------CCCCceeEEeCceEEEecCceEEEEcccCCee-ecCceeecHHH----------HHHHHhcCCCCeee
Q 004825 578 YFSGMP------SRNGQILRRHGDVFERTSGGYYRAHGRADDTM-NLGGIKVSSVE----------IERICNAVDSNVLE 640 (728)
Q Consensus 578 ~f~~~p------~~~g~~~y~TGDl~~~~~dG~l~~~GR~d~~i-ki~G~ri~~~e----------IE~~l~~~~p~V~~ 640 (728)
-|.-.| ......+.|||=+|++.+++ ++++|-.+|++ -+.|.+....+ |+.++ +..+.|-+
T Consensus 554 ~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~gk-i~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~-R~v~~VF~ 631 (1363)
T KOG3628|consen 554 TFKATPVESSGKPPSNVPFMRTGLLGFVHNGK-IYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVM-RGVIAVFD 631 (1363)
T ss_pred eEEeeeccccCCCCccchhhhhcceeeeeCCe-EEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHH-hccceEEE
Confidence 333222 12234578999999998655 55555555554 56777765543 34444 46778888
Q ss_pred eEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCccc---ceEEECCCCCCCCCCchhHHHHHH
Q 004825 641 TAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKV---SHVVPLPSLPRTATNKVMRRVLRK 717 (728)
Q Consensus 641 ~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P---~~i~~v~~lP~t~~GKvdR~~L~~ 717 (728)
+.|+- . ++++..++-++ .. ..++-.+++.+-++.-..-+.+- -.++.-+.||||+-|-|.-..+++
T Consensus 632 ~saf~------~-E~~~Vv~~esP-~a---~e~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi~~~~~k~ 700 (1363)
T KOG3628|consen 632 VSAFE------D-EHIVVVVLESP-DA---TEENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGIHNNECKQ 700 (1363)
T ss_pred Eeeee------c-ceEEEEEEeCc-ch---hhhhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCccccccccHHHHH
Confidence 87773 1 55655555444 32 22222223333222221112221 245666789999988899999999
Q ss_pred HHHh
Q 004825 718 QLAQ 721 (728)
Q Consensus 718 ~~~~ 721 (728)
.|.+
T Consensus 701 ~F~~ 704 (1363)
T KOG3628|consen 701 AFLE 704 (1363)
T ss_pred HHHc
Confidence 9876
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.30 E-value=4.7e-12 Score=101.39 Aligned_cols=70 Identities=37% Similarity=0.547 Sum_probs=59.2
Q ss_pred HHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCCccc--ceEEECCC-C
Q 004825 626 EIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPLFKV--SHVVPLPS-L 702 (728)
Q Consensus 626 eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P--~~i~~v~~-l 702 (728)
|||++|. +||+|.+|+|++.+++..| +.++||+++ . .+.|+++++++||.||+| ..++.+++ |
T Consensus 1 EIE~~l~-~~~~V~~~~V~~~~d~~~g-~~l~a~vv~-~-----------~~~i~~~~~~~l~~~~~P~~~~~v~~~~~l 66 (73)
T PF13193_consen 1 EIESVLR-QHPGVAEAAVVGVPDEDWG-ERLVAFVVL-D-----------EEEIRDHLRDKLPPYMVPRRIRFVRLDEEL 66 (73)
T ss_dssp HHHHHHH-TSTTEEEEEEEEEEETTTE-EEEEEEEEE-H-----------HHHHHHHHHHHS-GGGS-SEEEEEEESSSE
T ss_pred CHHHHHh-cCCCccEEEEEEEEccccc-ccceeEEEe-e-----------ecccccchhhhCCCcceeeEEEEccccCcC
Confidence 8999995 9999999999999988888 999999987 2 155666788899999999 67777788 9
Q ss_pred CCCCCCc
Q 004825 703 PRTATNK 709 (728)
Q Consensus 703 P~t~~GK 709 (728)
|+|+|||
T Consensus 67 P~t~~GK 73 (73)
T PF13193_consen 67 PRTPSGK 73 (73)
T ss_dssp EBETTSS
T ss_pred CCCCCCC
Confidence 9999999
No 133
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A.
Probab=99.00 E-value=6.7e-12 Score=105.68 Aligned_cols=80 Identities=13% Similarity=0.042 Sum_probs=51.0
Q ss_pred CChhhHHHHHHhhcCCCCCCccchhheeeecccCCCC----------CCCccCChhhhhhccHHHHHHHhccccccCC-C
Q 004825 44 ATPATWQNITTHILSPDLPFSFHQLLYYGCYKDFGPD----------PPAWIPDPEAAKVTNVGKLLQTRGEEFLGSG-Y 112 (728)
Q Consensus 44 ~hq~~pfe~lv~~l~~~r~~~~~~~~f~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-y 112 (728)
+||+|||++||++|+++|+.+++|+ ||++|++.+. .....+.....+++||.+.+.+.++++.+.+ |
T Consensus 1 ~hq~~Pf~~lv~~l~~~r~~~~~pl--fqv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~l~~~~~~~~l~~~~~Y 78 (91)
T PF13745_consen 1 EHQDYPFERLVEALGPPRDPSRNPL--FQVMFNYQNFSQSALDLGGLRLEPIPLENGGAKFDLTLEVREDGDGLRLQLEY 78 (91)
T ss_dssp -T--S-HHHHHHHT-----TTS-SS---SEEEEEE----S----SSEEEEE-SS--SB-SSSEEEEEEE-SS-EEEEEEE
T ss_pred CCccCCHHHHHHHhCcccCCccccc--cCeEEEEEecccccccCCCceEEEeeccccceeeeEEEEEEecCCeEEEEEEE
Confidence 6999999999999999999999999 9999999211 1112334457799999999999999999999 9
Q ss_pred CCCCCCHHHHHHHHhhCH
Q 004825 113 KDPISSFSNFQEFSVSNP 130 (728)
Q Consensus 113 ~~~~~~~~~~~~~ti~~~ 130 (728)
++ ++|++.+|++|
T Consensus 79 ~~-----~lf~~~ti~~~ 91 (91)
T PF13745_consen 79 NT-----DLFSEETIERM 91 (91)
T ss_dssp ET-----TT--HHHHHHH
T ss_pred Eh-----HhCCHHHHhcC
Confidence 99 99999999875
No 134
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.82 E-value=2.3e-07 Score=97.88 Aligned_cols=236 Identities=16% Similarity=0.123 Sum_probs=130.2
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHHHH---HHHhcCCCCCC--EEEecCCcchh---hh--HHHHHHHhhhCc
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAAAD---AWCHMDIRKAD--IVAWPTNLGWM---MG--PWLVYASLLNGA 423 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d--~~l~~~~~~~~---~~--~~~~~~~L~~G~ 423 (728)
+.+++..++-||||||.|--+.+.+.++...... ....+...... .++...|-... ++ .......+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 4566777899999999985555655544443322 22323222222 23333332211 11 122333445555
Q ss_pred EEEEeC-CCCCcchHHHHH----HHhCCcEEEecHHHHHHHHcCCCCC--CCCCc-CeeEEEeec------CCCCHHH-H
Q 004825 424 SIALYN-GSPLGSGFAKFV----QDAKVTMLGVVPSIVRTWKSTNCID--GYDWS-SIRCFGSTG------EASNVDE-Y 488 (728)
Q Consensus 424 ~lvl~~-~~~~~~~l~~~i----~~~~vt~l~~~Ps~l~~l~~~~~~~--~~~l~-~lr~i~~gG------e~l~~~~-~ 488 (728)
. .+.+ ...+.+.+.+.+ .+.++..+++.|.++-.++...... ...|+ ..+.+-.|| |.++.+. .
T Consensus 167 ~-~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 167 R-FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred e-eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 5 3333 334555555444 3456777888777666555432222 23343 345555554 5576554 4
Q ss_pred HHHHhccCC---CCeEecccccccccccccCCcccccccccccCCCCCceEEEEcCC-CCccCCCCCceeEEEEeccccC
Q 004825 489 LWLMGRALY---KPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCKLFILGND-GCPIPQNVPGMGELALSPLIFG 564 (728)
Q Consensus 489 ~~~~~~~~~---~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~-g~~vp~g~~giGEl~v~~~~~~ 564 (728)
+.+.+.++- ..+++.||+||.......+.... .++|-. +.|.|++ .+++|.|++ |-|-+-.....
T Consensus 246 ~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~--------~~~p~w-V~iRDp~tl~~~~~Ge~--Gli~vidl~~~ 314 (365)
T PF04443_consen 246 ARLQEVFGVIPIENIYDMYGMTELNSQAYECGHGH--------FHVPPW-VIIRDPETLEPLPPGET--GLIQVIDLANT 314 (365)
T ss_pred HHHHHHHCCCCHHHeeeeeeccccchhheeCCCCc--------ccCCCe-EEEECCCCCcCCCCCCe--eEEEEEccccc
Confidence 555565653 36999999999776443331110 122323 7777876 789999987 88876333211
Q ss_pred CCccccCccccccccccCCCCCCceeEEeCceEEEecC--------ceEEEEcccCCeeecCceeec
Q 004825 565 ASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTSG--------GYYRAHGRADDTMNLGGIKVS 623 (728)
Q Consensus 565 ~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~d--------G~l~~~GR~d~~iki~G~ri~ 623 (728)
. .++ ..-|.|+|.+..+ .+++++||.+.- .+||-...
T Consensus 315 s-------------------~p~--~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~a-e~RGCs~~ 359 (365)
T PF04443_consen 315 S-------------------YPG--FILTEDLGVLHGDDDCGCRKGKYFEVLGRADGA-EIRGCSLT 359 (365)
T ss_pred C-------------------CCc--EEEEcceeeecCCCCCCCccCCEEEEEeCCCCC-ccCCcHHH
Confidence 0 123 3569999988654 279999998743 35665543
No 135
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.39 E-value=3e-06 Score=94.68 Aligned_cols=164 Identities=16% Similarity=0.134 Sum_probs=85.8
Q ss_pred CcCeeEEEeecCCCCHHHHHHHHhccCCCCe-EecccccccccccccCCcccccccccccCCCCC-ceEEEEcCC-----
Q 004825 470 WSSIRCFGSTGEASNVDEYLWLMGRALYKPV-IEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMG-CKLFILGND----- 542 (728)
Q Consensus 470 l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l-~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~-~~v~i~d~~----- 542 (728)
+|+|+.|.+.+..-...-..++++.++++++ ...|++||+-+.+-.. + ......=.|-.+ .+..=+|+.
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i~i~~~-~---~~~~~~l~~~~~ffEFip~~~~~~~~~ 341 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFIGIPLD-P---EDPGYVLAPDSGFFEFIPVDEDEQNPS 341 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEEEEES--C---CC--EEE-TTSSEEEEEE-STT-----
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEEEEecC-C---CCCceEeecCCeEEEEEeccCCccccc
Confidence 5789966655544334455667777777654 4799999965432221 1 111111112222 122222221
Q ss_pred --CCccC-----CCCCceeEEEEeccccCCCccccCccccccccccCCCCCCceeEEeCceEEEec--Cc--eEEEEccc
Q 004825 543 --GCPIP-----QNVPGMGELALSPLIFGASSTLLNANHYDVYFSGMPSRNGQILRRHGDVFERTS--GG--YYRAHGRA 611 (728)
Q Consensus 543 --g~~vp-----~g~~giGEl~v~~~~~~~~~~~~~~~~~~~~f~~~p~~~g~~~y~TGDl~~~~~--dG--~l~~~GR~ 611 (728)
.+.+. .|+. =||+|+.. + |=-.|+.||+++... ++ .|+|+||.
T Consensus 342 ~~~~~l~~~ele~G~~--YelviTt~--~----------------------GLyRY~iGDvVrv~gf~~~~P~i~F~~R~ 395 (528)
T PF03321_consen 342 EQPKTLLLHELEVGEE--YELVITTN--S----------------------GLYRYRIGDVVRVTGFYNQTPRIEFVGRR 395 (528)
T ss_dssp --SSSEEGGG--TT-E--EEEEEEST--T----------------------S-SSEEECEEEEEEEEETTEEEEEEEEET
T ss_pred CCCceecHHHhcCCCe--EEEEEecc--c----------------------ceeeeecCCEEEEeeccCCCcEEEEeccC
Confidence 23332 3332 44555322 1 111499999999853 44 79999999
Q ss_pred CCeeecCceeecHHHHHHHHhcC----CCCeeeeEEEeecCCCCCceEEEEEEEecC
Q 004825 612 DDTMNLGGIKVSSVEIERICNAV----DSNVLETAAIGVPPPDGGPEQLTIVVVFKD 664 (728)
Q Consensus 612 d~~iki~G~ri~~~eIE~~l~~~----~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~ 664 (728)
+.++++.|+++.-.+|+.++.+. .-.+.+..+......... ..-+.|+.+..
T Consensus 396 ~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~-~~Y~~~~e~~~ 451 (528)
T PF03321_consen 396 GQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNP-PHYVLFWELEG 451 (528)
T ss_dssp TEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSS-BEEEEEEEECS
T ss_pred CceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCC-CceEEEEEeCC
Confidence 99999999999999999999643 234667666654222222 45566666654
No 136
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.75 E-value=0.0022 Score=72.25 Aligned_cols=44 Identities=14% Similarity=0.261 Sum_probs=38.8
Q ss_pred eEEeCceEEEec----CceEEEEcccCCeeecCceeecHHHHHHHHhc
Q 004825 590 LRRHGDVFERTS----GGYYRAHGRADDTMNLGGIKVSSVEIERICNA 633 (728)
Q Consensus 590 ~y~TGDl~~~~~----dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~ 633 (728)
.|+.||.++... --.|.|+||.+..+++.|+++.-.+++.+|.+
T Consensus 409 RY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 409 RYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred EeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 499999999853 35799999999999999999999999998864
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.66 E-value=0.005 Score=68.64 Aligned_cols=44 Identities=18% Similarity=0.246 Sum_probs=38.2
Q ss_pred eEEeCceEEEe----cCceEEEEcccCCeeecCceeecHHHHHHHHhc
Q 004825 590 LRRHGDVFERT----SGGYYRAHGRADDTMNLGGIKVSSVEIERICNA 633 (728)
Q Consensus 590 ~y~TGDl~~~~----~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~ 633 (728)
.||.||+++.. ..-.+.|++|.+.+..+.|.+.+-.++..++.+
T Consensus 422 RYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 422 RYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKN 469 (612)
T ss_pred EEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHH
Confidence 59999998874 456799999999999999999999999888754
No 138
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.51 E-value=0.0096 Score=66.61 Aligned_cols=44 Identities=14% Similarity=0.203 Sum_probs=38.4
Q ss_pred eEEeCceEEE----ecCceEEEEcccCCeeecCceeecHHHHHHHHhc
Q 004825 590 LRRHGDVFER----TSGGYYRAHGRADDTMNLGGIKVSSVEIERICNA 633 (728)
Q Consensus 590 ~y~TGDl~~~----~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~ 633 (728)
.||.||+++. +.--.+.|++|.+.+..+.|.+..-.++..++.+
T Consensus 416 RYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~ 463 (606)
T PLN02247 416 RYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQ 463 (606)
T ss_pred EEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHH
Confidence 5899999887 4457899999999999999999999999888853
No 139
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.48 E-value=0.00049 Score=58.00 Aligned_cols=88 Identities=24% Similarity=0.351 Sum_probs=56.2
Q ss_pred ceeecHHHHHHHHhcCCCCee-eeEEEeecCCCCCceEEEEEEEecCCCCCC--CCHHHHHHHHHHHHHhhCCCCcccce
Q 004825 619 GIKVSSVEIERICNAVDSNVL-ETAAIGVPPPDGGPEQLTIVVVFKDSNYTP--PDLNQLRMSFNSAVQKKLNPLFKVSH 695 (728)
Q Consensus 619 G~ri~~~eIE~~l~~~~p~V~-~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~--~~~~~l~~~l~~~l~~~Lp~~~~P~~ 695 (728)
|.+|+|..||++|. ..|++. +..++.. .... .+.+...|...+ +... .+..++.+.|.+.+++.|.-.. -..
T Consensus 1 GvnvfP~~Ie~vl~-~~~~~~~~y~i~v~-~~~~-~D~l~v~vE~~~-~~~~~~~~~~~l~~~i~~~lk~~lgv~~-~V~ 75 (96)
T PF14535_consen 1 GVNVFPSQIEEVLR-EFPEVSPEYQIVVT-REGG-LDELTVRVELRP-GFSDDAEDLEALAERIAERLKERLGVRP-EVE 75 (96)
T ss_dssp TEEE-HHHHHHHHC-TSTTEEEEEEEEEE-EETT-EEEEEEEEEEST-TCCTTHHHHHHHHHHHHHHHHHHHSS-E-EEE
T ss_pred CcEECHHHHHHHHH-hCcCCCCcEEEEEE-cCCC-CcEEEEEEEECC-ccCcchHHHHHHHHHHHHHHHhhcCceE-EEE
Confidence 78999999999995 899998 5544443 3333 378888888877 4311 1357788899999999886322 234
Q ss_pred EEECCCCCCCCCCchhH
Q 004825 696 VVPLPSLPRTATNKVMR 712 (728)
Q Consensus 696 i~~v~~lP~t~~GKvdR 712 (728)
++...+||++ .||..|
T Consensus 76 lv~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 76 LVPPGTLPRS-EGKAKR 91 (96)
T ss_dssp EE-TT-S----SSSS-S
T ss_pred EECCCCccCC-CCcceE
Confidence 5556689998 688765
No 140
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=93.62 E-value=0.31 Score=52.29 Aligned_cols=99 Identities=17% Similarity=0.145 Sum_probs=77.5
Q ss_pred CCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCcEEEecCC
Q 004825 192 DDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNV--NSVVIYLAIVLAGYIVVSIAD 267 (728)
Q Consensus 192 d~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~--~~vva~lA~lkaG~~~vpl~p 267 (728)
+++..++...| .+|. ..-+|+.++...+..+|+.|...|..+||+|.++..-+. .-+-.-+|+.++|++++|+.+
T Consensus 90 ~~i~~ihaSSG-TTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~ 168 (438)
T COG1541 90 EEIVRIHASSG-TTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISG 168 (438)
T ss_pred cceEEEEccCC-CCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCC
Confidence 34444554443 2333 356899999999999999999999999999998877222 125677899999999999988
Q ss_pred CCCHHHHHHHHHhcCceEEEEecce
Q 004825 268 SFASLEISARLRISKAKAIFTQDLI 292 (728)
Q Consensus 268 ~~~~~~l~~~l~~~~~~~il~~~~~ 292 (728)
+ ..++...+++|.++.+|.+..++
T Consensus 169 g-~~~~~~~l~~df~~tvI~~tps~ 192 (438)
T COG1541 169 G-NTERQLELMKDFKPTVIAATPSY 192 (438)
T ss_pred c-cHHHHHHHHHhcCCcEEEEChHH
Confidence 3 46777889999999999998865
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=82.40 E-value=10 Score=41.57 Aligned_cols=100 Identities=15% Similarity=0.073 Sum_probs=70.6
Q ss_pred CCCeEEEEeccCCCCCCc--eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCcEEEecC
Q 004825 191 LDDIVIRWCDEGDGGLPV--KSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNV--NSVVIYLAIVLAGYIVVSIA 266 (728)
Q Consensus 191 pd~~Al~~~~~~~~~~~~--~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~--~~vva~lA~lkaG~~~vpl~ 266 (728)
++.++.+....| .+|.. -.+|...+......+++.+...|+++||++..+.+.+. ......++.++.|+..++++
T Consensus 74 ~~~~~~~~~TSG-TTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 74 REQVVRIHASSG-TTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred hHHcEEEEECCC-CCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 345555533332 33332 34678888777777888888889999999987765543 22334567889999999997
Q ss_pred CCCCHHHHHHHHHhcCceEEEEecce
Q 004825 267 DSFASLEISARLRISKAKAIFTQDLI 292 (728)
Q Consensus 267 p~~~~~~l~~~l~~~~~~~il~~~~~ 292 (728)
+.. .+++...|++.++.++++....
T Consensus 153 ~~~-~~~~~~~i~~~~~t~l~~~Ps~ 177 (422)
T TIGR02155 153 GGQ-TEKQVQLIQDFKPDIIMVTPSY 177 (422)
T ss_pred CCC-HHHHHHHHHHHCCCEEEEcHHH
Confidence 765 4778889999999999887643
No 142
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=82.17 E-value=8.5 Score=42.51 Aligned_cols=95 Identities=14% Similarity=0.072 Sum_probs=68.5
Q ss_pred CCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCcEEEecCC
Q 004825 192 DDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNS--VVIYLAIVLAGYIVVSIAD 267 (728)
Q Consensus 192 d~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~--vva~lA~lkaG~~~vpl~p 267 (728)
+.++.++...| .+|. ..-+|..++...+...++.+...|+.+||++.++.+-+... ....+++.+.|+..+|...
T Consensus 86 ~~i~~i~~TSG-TTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~ 164 (445)
T TIGR03335 86 KDIYTIHETSG-TSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK 164 (445)
T ss_pred HHeEEEEeCCC-CCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc
Confidence 45665554332 2333 24579999998888889998889999999999998766532 2345788899999887653
Q ss_pred CCCHHHHHHHHHhcCceEEEEec
Q 004825 268 SFASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 268 ~~~~~~l~~~l~~~~~~~il~~~ 290 (728)
.+....++++.++.+++...
T Consensus 165 ---~~~~~~~i~~~~~t~l~~~p 184 (445)
T TIGR03335 165 ---CTFPIRIIESYRPTGIVASV 184 (445)
T ss_pred ---hhHHHHHHHHhCCCEEEECH
Confidence 24456788999999887654
No 143
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=76.58 E-value=14 Score=36.57 Aligned_cols=77 Identities=17% Similarity=0.107 Sum_probs=57.0
Q ss_pred CCCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCcEEEecCC
Q 004825 190 SLDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNV--NSVVIYLAIVLAGYIVVSIAD 267 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~--~~vva~lA~lkaG~~~vpl~p 267 (728)
.++.+|++.-.. -.|.+.+...+ ...|+.++|++. .+|-.. .+...+++++.+|+..|.+ +
T Consensus 148 ~~~D~a~l~yTs--------g~~~~~~~~~~-------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~ 210 (227)
T TIGR03089 148 DATAPALVAGGG--------EWTGAELVAAA-------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-T 210 (227)
T ss_pred CCCcceeeeccc--------cccHHHHHHHH-------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-c
Confidence 456777766554 23555443322 566899999999 988765 4556799999999999988 6
Q ss_pred CCCHHHHHHHHHhcCc
Q 004825 268 SFASLEISARLRISKA 283 (728)
Q Consensus 268 ~~~~~~l~~~l~~~~~ 283 (728)
.+.++++-..+++.++
T Consensus 211 rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 211 HPDPARLDQIAETERV 226 (227)
T ss_pred CCCHHHHHHHHHhhcC
Confidence 8999998888887765
No 144
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=68.99 E-value=36 Score=36.96 Aligned_cols=109 Identities=10% Similarity=-0.029 Sum_probs=74.7
Q ss_pred ceEEecCcHHHHHHHH---HHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcE
Q 004825 372 KAIPWTNATPFKAAAD---AWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTM 448 (728)
Q Consensus 372 KgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~ 448 (728)
-|+..|-+.++..+.. ....+++.++||+..+.|-+ ..+....+++-.+|..++...+.....++.=.|++.++.+
T Consensus 74 eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~-~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~ 152 (596)
T KOG1177|consen 74 EGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNS-YEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKA 152 (596)
T ss_pred ccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCCh-HHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEE
Confidence 3455666666554433 34568999999998877644 3334445677788888887765555566777899999999
Q ss_pred EEecHHHHHH-----HHcCC---------CCCCCCCcCeeEEEeecC
Q 004825 449 LGVVPSIVRT-----WKSTN---------CIDGYDWSSIRCFGSTGE 481 (728)
Q Consensus 449 l~~~Ps~l~~-----l~~~~---------~~~~~~l~~lr~i~~gGe 481 (728)
++..|.+... +++.. ..+...++.|+.+++.+|
T Consensus 153 l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~e 199 (596)
T KOG1177|consen 153 LFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADE 199 (596)
T ss_pred EEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCC
Confidence 9999876433 44331 233456788999999884
No 145
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=63.68 E-value=66 Score=35.90 Aligned_cols=98 Identities=15% Similarity=0.079 Sum_probs=70.8
Q ss_pred CCCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCcEEEe
Q 004825 189 RSLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNV--NSVVIYLAIVLAGYIVVS 264 (728)
Q Consensus 189 ~~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~--~~vva~lA~lkaG~~~vp 264 (728)
..++.+|.+.-..| .+|. .-.+|++.+...+..+... .++++++++..+++-.. .+...+++++..|+..++
T Consensus 163 ~~~~~~a~i~~TSG-tTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 238 (513)
T PRK07656 163 VDPDDVADILFTSG-TTGRPKGAMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILP 238 (513)
T ss_pred CCCCceEEEEeCCC-CCCCCCEEEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEe
Confidence 35677887665443 2233 3468899887666554433 47899999998888644 345568899999998887
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEecc
Q 004825 265 IADSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 265 l~p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
. +...++.+...+++.++.++.+...
T Consensus 239 ~-~~~~~~~~~~~i~~~~~t~~~~~p~ 264 (513)
T PRK07656 239 L-PVFDPDEVFRLIETERITVLPGPPT 264 (513)
T ss_pred c-CcCCHHHHHHHHHHhCCeEEechHH
Confidence 5 5678888999999999999877764
No 146
>PLN02736 long-chain acyl-CoA synthetase
Probab=62.13 E-value=56 Score=38.07 Aligned_cols=101 Identities=15% Similarity=-0.069 Sum_probs=72.1
Q ss_pred EEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 374 IPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 374 V~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
..+|.+.+...+ .......++.++|++...++-+.... ..+++.+..|+.++.++....++++...+++.++.+++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL-IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 346776654443 33345679999999988777665533 34568899999999887767778899999999999999
Q ss_pred ecHHHHHHHHcCCCCCCCCCcCeeEEEee
Q 004825 451 VVPSIVRTWKSTNCIDGYDWSSIRCFGST 479 (728)
Q Consensus 451 ~~Ps~l~~l~~~~~~~~~~l~~lr~i~~g 479 (728)
..+..+..+..... .++.++.+++-
T Consensus 156 ~~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 156 CVPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred ECHHHHHHHHHHhh----cCCCceEEEEE
Confidence 99888776654321 23556666654
No 147
>PRK08315 AMP-binding domain protein; Validated
Probab=60.47 E-value=94 Score=35.22 Aligned_cols=98 Identities=18% Similarity=0.215 Sum_probs=69.1
Q ss_pred CCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHHcCcEEEec
Q 004825 190 SLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPM--NVNSVVIYLAIVLAGYIVVSI 265 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~--s~~~vva~lA~lkaG~~~vpl 265 (728)
.++.+|.+.-..| .+|. .-.+|++.+...+..+... .+++++|++..+++- +..++..+++.+..|+..+..
T Consensus 197 ~~~~~a~i~~TSG-tTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 272 (559)
T PRK08315 197 DPDDPINIQYTSG-TTGFPKGATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYP 272 (559)
T ss_pred CCCCcEEEEEcCC-CCCCcceEEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEe
Confidence 3556666554443 2333 2467888886555544433 489999999888776 445566788999999988855
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEecc
Q 004825 266 ADSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 266 ~p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
.....+.++...+++.++.+++....
T Consensus 273 ~~~~~~~~~~~~l~~~~~t~~~~~P~ 298 (559)
T PRK08315 273 GEGFDPLATLAAVEEERCTALYGVPT 298 (559)
T ss_pred cCCCCHHHHHHHHHHcCCeEEecchH
Confidence 56677888889999999998877653
No 148
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=59.51 E-value=39 Score=31.86 Aligned_cols=56 Identities=11% Similarity=0.017 Sum_probs=41.5
Q ss_pred HHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 004825 624 SVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNP 689 (728)
Q Consensus 624 ~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~ 689 (728)
..+|+..+. ..|+|.+|.|+...+ ..+||+-+- . . .....++++.+++.++...|.
T Consensus 77 a~~i~~~v~-~~~~V~~A~vvv~~~-----~a~Vav~~~-~-~--~~~~~~i~~~V~~~v~~~~p~ 132 (177)
T PF09580_consen 77 ADRIANRVK-KVPGVEDATVVVTDD-----NAYVAVDLD-F-N--RFNTKKIKKKVEKAVKSADPR 132 (177)
T ss_pred HHHHHHHHh-cCCCceEEEEEEECC-----EEEEEEEec-c-c--ccchhHHHHHHHHHHHHhCCC
Confidence 467888884 999999999998632 556666554 2 1 246678899999999888876
No 149
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=58.24 E-value=46 Score=35.96 Aligned_cols=89 Identities=13% Similarity=0.042 Sum_probs=64.2
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHHH---HHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAAA---DAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.|+.+|++. =.+-.+|...+...+. ......+++.+|++....+-+... +..+++.+..|+..+.++.
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~-~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEF-VVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHH-HHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcccee-eeeeccccccccccccccc
Confidence 567787765 1235667766544333 333467899999988777665433 4557789999999999987
Q ss_pred CCCcchHHHHHHHhCCcEEEe
Q 004825 431 SPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~ 451 (728)
....+.+...+++.+++++++
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 777788999999999999996
No 150
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=54.18 E-value=1.5e+02 Score=32.94 Aligned_cols=98 Identities=13% Similarity=0.045 Sum_probs=69.9
Q ss_pred CCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCcEEEecC
Q 004825 190 SLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNS-VVIYLAIVLAGYIVVSIA 266 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~-vva~lA~lkaG~~~vpl~ 266 (728)
.++.+|.+.-..| .+|. .-.+|++.+...+..... ..|++++|++...++-.... ....++.+..|+..+..+
T Consensus 165 ~~~~~~~i~~TSG-tTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~ 240 (521)
T PRK06187 165 DENDAAAMLYTSG-TTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPR 240 (521)
T ss_pred CccceEEEEECCC-CCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecC
Confidence 4566777765543 2333 246789888866655544 45899999999888765422 334455888999988776
Q ss_pred CCCCHHHHHHHHHhcCceEEEEecce
Q 004825 267 DSFASLEISARLRISKAKAIFTQDLI 292 (728)
Q Consensus 267 p~~~~~~l~~~l~~~~~~~il~~~~~ 292 (728)
.. +.+.+...+++.++..+++....
T Consensus 241 ~~-~~~~~~~~l~~~~~t~l~~~p~~ 265 (521)
T PRK06187 241 RF-DPENLLDLIETERVTFFFAVPTI 265 (521)
T ss_pred CC-CHHHHHHHHHHhCCeEEEchHHH
Confidence 64 88889999999999999987653
No 151
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=53.53 E-value=1.5 Score=52.36 Aligned_cols=136 Identities=14% Similarity=-0.013 Sum_probs=84.1
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecc
Q 004825 212 TLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 212 TY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
+ .|+.++.+++|+.+...+..-.+++.|+---..++.-.+....+ +-.+..++...+.+++....+++.+-+..++..
T Consensus 130 ~-~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv~~~-~~~f~~~~~~~~~r~~~~~~~ds~~~l~~tSgs 207 (1032)
T KOG1178|consen 130 N-SELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKLSVETI-ADSFQMVLHNEDTREIRVGGNDSTALLSFTSGS 207 (1032)
T ss_pred c-cccchHHHhhhhhheeccceehhhhhhHHHHhhccccccchhhc-cchhhhhhccCCCcceeeecccccceEeecccc
Confidence 5 88999999999999987776666666665555555555555555 666777777777777777888877777766654
Q ss_pred eecCCcccchHhhHhhcCCcEEEEcCCCCCcccccCCCCcCHHHHHHhhhccccCccccccCCCCCceEEEecCCCCCCC
Q 004825 292 IIRGDKSIPLYRVIDAQAPLAIVIPAKGSSFSMKLRDGDISWLDFLERVRKLKENEFAAVEQPVEAFTNILFSSGTTGEP 371 (728)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~P 371 (728)
.- ++. +....+..+....+.....++.......+..+.+|+.+||+++
T Consensus 208 ~G-----~pk---------------------------~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~~ 255 (1032)
T KOG1178|consen 208 TG-----VPK---------------------------GVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQKF 255 (1032)
T ss_pred cc-----ccc---------------------------ccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchHHH
Confidence 21 000 0000000111111111111222222223467789999999999
Q ss_pred ceEEecCcHH
Q 004825 372 KAIPWTNATP 381 (728)
Q Consensus 372 KgV~~sh~~l 381 (728)
++..+.|.+.
T Consensus 256 ~~~~L~~~~~ 265 (1032)
T KOG1178|consen 256 IGALLFNGNN 265 (1032)
T ss_pred HhhHhhcCce
Confidence 9999998873
No 152
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=53.43 E-value=89 Score=36.81 Aligned_cols=103 Identities=8% Similarity=-0.007 Sum_probs=73.0
Q ss_pred EEecCcHHHHHHH---HHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 374 IPWTNATPFKAAA---DAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 374 V~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
..+|.+.+...+. ......++.++|++..+++-+... +...++.+..|+..|-......++.+...|++.++.+++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEW-LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 3466666544433 333467899999998877755543 344668899999999887777778899999999999999
Q ss_pred ecHHHHHHHHcCCCCCCCCCcCeeEEEeecC
Q 004825 451 VVPSIVRTWKSTNCIDGYDWSSIRCFGSTGE 481 (728)
Q Consensus 451 ~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe 481 (728)
.....+..+.... ..++.++.+++-++
T Consensus 184 ~~~~~~~~l~~~~----~~~~~l~~ii~~~~ 210 (696)
T PLN02387 184 CDSKQLKKLIDIS----SQLETVKRVIYMDD 210 (696)
T ss_pred ECHHHHHHHHHHh----hccCCceEEEEECC
Confidence 9888887775532 12445666665443
No 153
>PRK09274 peptide synthase; Provisional
Probab=50.92 E-value=1e+02 Score=34.83 Aligned_cols=99 Identities=10% Similarity=-0.023 Sum_probs=65.4
Q ss_pred CCCCceEEEecCCCC-CCCceEEecCcHHHHHHH---HHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeC
Q 004825 354 PVEAFTNILFSSGTT-GEPKAIPWTNATPFKAAA---DAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYN 429 (728)
Q Consensus 354 ~~~~~a~iiyTSGST-G~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~ 429 (728)
.|+.+|.+....+++ +..+-..+|.+.+...+. ......+++++|+++...+-+...- ..+++.+..|+..+..+
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~-~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFF-ALTFALFKAGAVPVLVD 97 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHH-HHHHHHHHcCeEEEEcC
Confidence 456666544322221 122333567776644333 3334568999999988877665443 44678899999999887
Q ss_pred CCCCcchHHHHHHHhCCcEEEecH
Q 004825 430 GSPLGSGFAKFVQDAKVTMLGVVP 453 (728)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P 453 (728)
.....+++...+++.++..+...+
T Consensus 98 ~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCccHHHHHHHHHhcCCCEEEecc
Confidence 666667888899999998888754
No 154
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=50.73 E-value=63 Score=34.49 Aligned_cols=66 Identities=23% Similarity=0.192 Sum_probs=51.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCceEEEEec
Q 004825 221 WLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADS-----FASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 221 ~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~~ 290 (728)
..|.-.|+.+||++||-|.+ .+.-++...=+++..|+.+|.+|-+ .+++.++..|... .|+||...
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVh 130 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVH 130 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEeh
Confidence 56667788889999995544 4566788888999999999988754 5788888888875 77777665
No 155
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=50.56 E-value=79 Score=35.83 Aligned_cols=97 Identities=13% Similarity=0.062 Sum_probs=67.8
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.|+.+|++..- ++.++...+|.+.+...+ .......++.++|++....+-+... +..+++.+..|+..+..+.
T Consensus 37 ~p~~~A~~~~~---~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~ 112 (547)
T PRK13295 37 CPDKTAVTAVR---LGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMP 112 (547)
T ss_pred CCCceEEEecC---CCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEecccc
Confidence 35667765432 223344567777665443 3333456899999999888877665 4456799999999988776
Q ss_pred CCCcchHHHHHHHhCCcEEEecHH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVPS 454 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps 454 (728)
....+.+...++..+++.+.....
T Consensus 113 ~~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 113 IFRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred ccCHHHHHHHHHhcCceEEEEecc
Confidence 666678889999999998877553
No 156
>PRK12583 acyl-CoA synthetase; Provisional
Probab=49.44 E-value=1.7e+02 Score=32.99 Aligned_cols=98 Identities=16% Similarity=0.226 Sum_probs=68.5
Q ss_pred CCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHHcCcEEEec
Q 004825 190 SLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPM--NVNSVVIYLAIVLAGYIVVSI 265 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~--s~~~vva~lA~lkaG~~~vpl 265 (728)
.++.+|.+.-..| .+|. ...+|++.+...+..+... .|++++|++...+|- ....+..+++.+..|+..+..
T Consensus 199 ~~~~~a~i~~TSG-sTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~ 274 (558)
T PRK12583 199 DRDDPINIQYTSG-TTGFPKGATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYP 274 (558)
T ss_pred CCCCcEEEEECCC-CCCCCceEEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEee
Confidence 4666776554432 2232 3468888886655554443 488999999887764 345667778889999988854
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEecc
Q 004825 266 ADSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 266 ~p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
.....++++...+++.++..++....
T Consensus 275 ~~~~~~~~~~~~i~~~~~t~l~~~P~ 300 (558)
T PRK12583 275 NEAFDPLATLQAVEEERCTALYGVPT 300 (558)
T ss_pred cCCCCHHHHHHHHHHcCCeEEeccHH
Confidence 55567888888999999998877654
No 157
>PLN03052 acetate--CoA ligase; Provisional
Probab=49.00 E-value=1.2e+02 Score=35.84 Aligned_cols=99 Identities=16% Similarity=0.084 Sum_probs=69.7
Q ss_pred CCCCceEEEecCCC-CCCCceEEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeC
Q 004825 354 PVEAFTNILFSSGT-TGEPKAIPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYN 429 (728)
Q Consensus 354 ~~~~~a~iiyTSGS-TG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~ 429 (728)
.++.+|.+ +...+ .|.+ ...+|.+.+...+ .......++.++|++...++-+..+- ..+++.+..|+..+.++
T Consensus 188 ~pd~~Ai~-~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~v-ia~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAII-WRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAV-IIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEE-EECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH-HHHHHHHHcCCEEEeeC
Confidence 45777755 44322 1222 2456776664433 33445679999999999888766653 44668999999999988
Q ss_pred CCCCcchHHHHHHHhCCcEEEecHHH
Q 004825 430 GSPLGSGFAKFVQDAKVTMLGVVPSI 455 (728)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~Ps~ 455 (728)
....++++...+++.++.+++.....
T Consensus 265 p~~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 265 DSFAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCCCHHHHHHHHHhcCceEEEEcCcc
Confidence 77777889999999999999886643
No 158
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=48.91 E-value=46 Score=35.54 Aligned_cols=66 Identities=23% Similarity=0.202 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCceEEEEec
Q 004825 221 WLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADS-----FASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 221 ~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~~ 290 (728)
..|-..|...|+++||.|.+-.- -+....-|++.+|+.+|.+|-+ ..++.++..+..-. ++||...
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~h 121 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVVH 121 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE-
T ss_pred HHHHHHHHhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEec
Confidence 56667788899999999888643 4455567789999999888754 56788888877544 6665544
No 159
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=48.55 E-value=73 Score=35.98 Aligned_cols=88 Identities=17% Similarity=0.082 Sum_probs=68.6
Q ss_pred eEEecCcHHHHHHHHHHHh---cC--CCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCc
Q 004825 373 AIPWTNATPFKAAADAWCH---MD--IRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVT 447 (728)
Q Consensus 373 gV~~sh~~l~~~~~~~~~~---~~--~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt 447 (728)
|..+|++.+...+...... .+ ++.+|++...+|-+..+... .++.+..|+.+.-.....+...+...++.-+++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~-~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVEL-ALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHH-HHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 7889988766555444332 33 78899999999887766543 458899999998888777888899999999999
Q ss_pred EEEecHHHHHHHHc
Q 004825 448 MLGVVPSIVRTWKS 461 (728)
Q Consensus 448 ~l~~~Ps~l~~l~~ 461 (728)
+++.....+..+..
T Consensus 122 iif~d~~~~~~i~~ 135 (537)
T KOG1176|consen 122 LIFVDEDFYDKISE 135 (537)
T ss_pred EEEEcCchHHHHHH
Confidence 99998877777643
No 160
>PRK06839 acyl-CoA synthetase; Validated
Probab=48.41 E-value=1.2e+02 Score=33.60 Aligned_cols=96 Identities=11% Similarity=0.008 Sum_probs=68.7
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHHH----hcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAWC----HMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYN 429 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~ 429 (728)
.|+.+|.+. .+..+|.+.+...+..... ..++.+++++....+-+... +..+++.+..|+..+..+
T Consensus 15 ~p~~~a~~~---------~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~~~ 84 (496)
T PRK06839 15 HPDRIAIIT---------EEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEY-IVLLFAIAKVECIAVPLN 84 (496)
T ss_pred CCCCeEEEE---------CCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecC
Confidence 456666552 1356777776554444332 35789999998877766553 345778999999999887
Q ss_pred CCCCcchHHHHHHHhCCcEEEecHHHHHHH
Q 004825 430 GSPLGSGFAKFVQDAKVTMLGVVPSIVRTW 459 (728)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l 459 (728)
....+..+...+++.+++.++..+.....+
T Consensus 85 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 85 IRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred cccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 666667888899999999999888776554
No 161
>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
Probab=48.27 E-value=64 Score=31.27 Aligned_cols=71 Identities=15% Similarity=0.033 Sum_probs=55.8
Q ss_pred CCCCeEEEEeccCCCCCCceeecHHH-HHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCC
Q 004825 190 SLDDIVIRWCDEGDGGLPVKSMTLKE-LRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADS 268 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~~~~lTY~e-L~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~ 268 (728)
.-.++++++.+. .....+ +.+.+.++++.|.++| .+.+.....=-|=++.=++...|+.++-+.|.
T Consensus 13 ~~~~i~V~~gs~--------~~~~~~~~~~~a~~lg~~la~~g-----~~V~tGG~~GiMea~~~gA~~~gg~~vGi~p~ 79 (205)
T COG1611 13 GIRQIVVICGSA--------RGIEPEEYYELARELGRELAKRG-----LLVITGGGPGVMEAVARGALEAGGLVVGILPG 79 (205)
T ss_pred CcceEEEEEeCC--------CCCCCHHHHHHHHHHHHHHHhCC-----cEEEeCCchhhhhHHHHHHHHcCCeEEEecCC
Confidence 345688888776 333334 8899999999999987 56666666667888888999999999999998
Q ss_pred CCHHH
Q 004825 269 FASLE 273 (728)
Q Consensus 269 ~~~~~ 273 (728)
++.++
T Consensus 80 ~~~~~ 84 (205)
T COG1611 80 LLHEQ 84 (205)
T ss_pred Cchhh
Confidence 87765
No 162
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=47.78 E-value=1e+02 Score=34.84 Aligned_cols=86 Identities=19% Similarity=0.209 Sum_probs=65.5
Q ss_pred EecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+...+... ....++.+++++....+-+.+. +..+++.+..|+..+..+......++...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 46666654444333 3456899999998888777665 4557799999999999887777788999999999999999
Q ss_pred cHHHHHHHHc
Q 004825 452 VPSIVRTWKS 461 (728)
Q Consensus 452 ~Ps~l~~l~~ 461 (728)
.+.....+.+
T Consensus 125 ~~~~~~~~~~ 134 (542)
T PRK06155 125 EAALLAALEA 134 (542)
T ss_pred ChhhHHHHHH
Confidence 8877666543
No 163
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=47.07 E-value=99 Score=35.25 Aligned_cols=85 Identities=14% Similarity=0.103 Sum_probs=64.5
Q ss_pred EEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 374 IPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 374 V~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
..+|.+.+...+ .......++.++|++....+-+.+. +..+++.+..|+..+..+....+..+...+++.+++.+.
T Consensus 72 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 150 (570)
T PRK04319 72 EKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPEL-YFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLI 150 (570)
T ss_pred eeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEE
Confidence 457777665444 3333457899999998887766653 345678999999998887766778899999999999999
Q ss_pred ecHHHHHHH
Q 004825 451 VVPSIVRTW 459 (728)
Q Consensus 451 ~~Ps~l~~l 459 (728)
..+..+..+
T Consensus 151 ~~~~~~~~~ 159 (570)
T PRK04319 151 TTPALLERK 159 (570)
T ss_pred EChhhhhcc
Confidence 988876554
No 164
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=47.05 E-value=2.8e+02 Score=29.22 Aligned_cols=71 Identities=8% Similarity=-0.103 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHc-CCCCCCEEEEEcCC-CHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEe
Q 004825 218 AEVWLVAYALNAL-GLDKGSAIAIDMPM-NVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQ 289 (728)
Q Consensus 218 ~~a~~lA~~L~~~-Gv~~gd~Vai~~~~-s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~ 289 (728)
+...++...|.+. |+.+.+ +.+...+ +..+..++.+.++.|-..+..++.+........++..+++++...
T Consensus 32 ~~~~~~~~~la~~~g~~~~~-~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 32 ALMDEILEGLRYVFQTENGL-TFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred HHHHHHHHHHHHHhcCCCCC-EEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 3344444444443 664444 4444445 444555666777788766666665555445566777787777654
No 165
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=46.92 E-value=95 Score=35.89 Aligned_cols=97 Identities=16% Similarity=0.092 Sum_probs=68.7
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.++.+|++. .+..+|. ...+|.+.+...+ .......+++++|++....+-+... +..+++.+..|+..+.++.
T Consensus 70 ~p~~~Al~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIW-EGDEPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA-AIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCCEEeccCC
Confidence 467777653 3222232 3467777664433 3334557899999999888866554 3456689999999998877
Q ss_pred CCCcchHHHHHHHhCCcEEEecHH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVPS 454 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps 454 (728)
...+..+...+++.++.++++...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 677788999999999999887654
No 166
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=46.54 E-value=1.9e+02 Score=32.29 Aligned_cols=81 Identities=14% Similarity=0.086 Sum_probs=61.9
Q ss_pred ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEE
Q 004825 208 VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVN-SVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAI 286 (728)
Q Consensus 208 ~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~-~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~i 286 (728)
...+|++.+...+..+...+ ++++||++...+|-+.. .+..+++++..|+..+.. +...++.+...+++.++..+
T Consensus 178 ~v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 253 (515)
T TIGR03098 178 GVVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGL 253 (515)
T ss_pred eEEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceE
Confidence 35678888877666655443 68899999999987653 345678889999998866 45678889999999999988
Q ss_pred EEecce
Q 004825 287 FTQDLI 292 (728)
Q Consensus 287 l~~~~~ 292 (728)
.+....
T Consensus 254 ~~~P~~ 259 (515)
T TIGR03098 254 AAVPPL 259 (515)
T ss_pred ecChHH
Confidence 887643
No 167
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=46.44 E-value=84 Score=33.73 Aligned_cols=67 Identities=16% Similarity=0.040 Sum_probs=54.5
Q ss_pred cCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHH
Q 004825 392 MDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTW 459 (728)
Q Consensus 392 ~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l 459 (728)
.++..+|++....+-+.. .+..+++.+..|+.++..+.......+..++++.+++.+...+.....+
T Consensus 20 ~g~~~gd~v~l~~~n~~~-~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 20 GGVGPGDRVAVLLERSAE-LVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred hCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 679999999888777754 3345778999999999888766777889999999999999988766554
No 168
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=45.99 E-value=1.1e+02 Score=35.26 Aligned_cols=96 Identities=18% Similarity=0.094 Sum_probs=66.8
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHH---HHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKA---AADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.++.+|++ +.+..+|. .-.+|.+.+... +.......+++++|++..+++-+...- ..+++.+..|+..+....
T Consensus 66 ~p~~~A~~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALI-AVSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAA-FAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCcEEEeeCC
Confidence 45677754 43332332 345676665443 333345579999999998887665543 446788999999988877
Q ss_pred CCCcchHHHHHHHhCCcEEEecH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVP 453 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P 453 (728)
......+...|++.++.+++...
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 66777899999999999988754
No 169
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=45.77 E-value=1.2e+02 Score=34.37 Aligned_cols=84 Identities=12% Similarity=-0.056 Sum_probs=64.2
Q ss_pred EecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHH
Q 004825 375 PWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPS 454 (728)
Q Consensus 375 ~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps 454 (728)
.+|.+.+...+......+.-.++|++...++-+..+. ..+++.+..|+..+.++......++...+++.++.++.....
T Consensus 45 ~~Ty~el~~~~~~lA~~L~~~~gd~Val~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~ 123 (539)
T PRK06334 45 KLSYNQVRKAVIALATKVSKYPDQHIGIMMPASAGAY-IAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQ 123 (539)
T ss_pred cccHHHHHHHHHHHHHHHhhccCCeEEEEcCCchHHH-HHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHH
Confidence 3688877776666665554468999988888776643 446799999999988876666678999999999999988877
Q ss_pred HHHHH
Q 004825 455 IVRTW 459 (728)
Q Consensus 455 ~l~~l 459 (728)
.+..+
T Consensus 124 ~~~~~ 128 (539)
T PRK06334 124 LMQHL 128 (539)
T ss_pred HHHHH
Confidence 66554
No 170
>PLN03051 acyl-activating enzyme; Provisional
Probab=45.65 E-value=1.6e+02 Score=32.95 Aligned_cols=99 Identities=6% Similarity=-0.056 Sum_probs=65.6
Q ss_pred CCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCcEEEecC
Q 004825 190 SLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVN-SVVIYLAIVLAGYIVVSIA 266 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~-~vva~lA~lkaG~~~vpl~ 266 (728)
.|+.+|++.-..| .+|. .-.+|++.+...+... ....++.++|++...+|-+.. ....+++.+..|+..+..+
T Consensus 117 ~~~d~a~i~yTSG-TTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (499)
T PLN03051 117 PVESVTNILFSSG-TTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYG 192 (499)
T ss_pred CccceEEEEeCCC-CCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecC
Confidence 3567777665443 2232 2356777665433222 234588899988777765432 1345778889999988776
Q ss_pred CCCCHHHHHHHHHhcCceEEEEecce
Q 004825 267 DSFASLEISARLRISKAKAIFTQDLI 292 (728)
Q Consensus 267 p~~~~~~l~~~l~~~~~~~il~~~~~ 292 (728)
.....+++...+++.++..+......
T Consensus 193 ~~~~~~~~~~~i~~~~vt~~~~vP~~ 218 (499)
T PLN03051 193 GAPLGRGFGKFVQDAGVTVLGLVPSI 218 (499)
T ss_pred CCCCcHHHHHHHHHhCCcEEEeCHHH
Confidence 55567889999999999998887643
No 171
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=45.54 E-value=3.8e+02 Score=30.66 Aligned_cols=84 Identities=19% Similarity=0.034 Sum_probs=61.9
Q ss_pred EecCcHHHHHHHH---HHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAAAD---AWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+...+.. .....++.++|++....+-+... +..+++.+..|+..+..+.......+...+++.++..++.
T Consensus 62 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~ 140 (600)
T PRK08279 62 SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY-LAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIV 140 (600)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 4566665444333 33456889999999888777655 3457789999999988877666678889999999999988
Q ss_pred cHHHHHHH
Q 004825 452 VPSIVRTW 459 (728)
Q Consensus 452 ~Ps~l~~l 459 (728)
.......+
T Consensus 141 ~~~~~~~~ 148 (600)
T PRK08279 141 GEELVEAF 148 (600)
T ss_pred ChHHHHHH
Confidence 77665544
No 172
>PRK07788 acyl-CoA synthetase; Validated
Probab=45.50 E-value=96 Score=35.11 Aligned_cols=84 Identities=21% Similarity=0.072 Sum_probs=62.7
Q ss_pred EecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+...+ .......++.++|++....+-+.. .+..+++.+..|+..+..+.....+++...+++.++..++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRG-FVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 46766664433 333345689999999887665433 33557799999999999987777788999999999999998
Q ss_pred cHHHHHHH
Q 004825 452 VPSIVRTW 459 (728)
Q Consensus 452 ~Ps~l~~l 459 (728)
.+.....+
T Consensus 153 ~~~~~~~~ 160 (549)
T PRK07788 153 DDEFTDLL 160 (549)
T ss_pred CchhHHHH
Confidence 88766655
No 173
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=45.47 E-value=1.3e+02 Score=34.98 Aligned_cols=97 Identities=13% Similarity=0.020 Sum_probs=68.9
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.++.+|++. .+... .....+|.+.+...+... ....++.++|++....+-+...- ..+++.+..|+..+..+.
T Consensus 80 ~p~~~Al~~-~~~~~--~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIW-EGDDP--GDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAA-VAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEE-ECCCC--CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEecCC
Confidence 467777653 22111 134568888765544333 34568999999998887766643 346689999999998887
Q ss_pred CCCcchHHHHHHHhCCcEEEecHH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVPS 454 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps 454 (728)
......+...+++.++.++++...
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 667788999999999999987653
No 174
>PLN02614 long-chain acyl-CoA synthetase
Probab=44.92 E-value=1.7e+02 Score=34.28 Aligned_cols=86 Identities=6% Similarity=-0.084 Sum_probs=64.3
Q ss_pred EecCcHHHHH---HHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKA---AADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+... +.......++.++|++...++-+... +...++.+..|+..|-......++++...+++.++.+++.
T Consensus 79 ~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~ 157 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW-IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFV 157 (666)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEE
Confidence 4576655443 33334557899999998877766543 3456789999999998887777788999999999999999
Q ss_pred cHHHHHHHHc
Q 004825 452 VPSIVRTWKS 461 (728)
Q Consensus 452 ~Ps~l~~l~~ 461 (728)
....+..+..
T Consensus 158 ~~~~~~~~~~ 167 (666)
T PLN02614 158 EEKKISELFK 167 (666)
T ss_pred CHHHHHHHHH
Confidence 8877666543
No 175
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.87 E-value=1.1e+02 Score=35.01 Aligned_cols=84 Identities=20% Similarity=-0.003 Sum_probs=63.3
Q ss_pred EecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+...+... ....++..+|++....+-+.. .+..+++.+..|+..+..+.....+.+...+++.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 36777665444333 345689999999888776665 34557789999999998887777788999999999999988
Q ss_pred cHHHHHHH
Q 004825 452 VPSIVRTW 459 (728)
Q Consensus 452 ~Ps~l~~l 459 (728)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 176
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=42.65 E-value=1.8e+02 Score=34.64 Aligned_cols=118 Identities=12% Similarity=0.045 Sum_probs=77.8
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHHHHH---HHh---cCCCCC-----------CEEEecCCcchhhhHHHHH
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADA---WCH---MDIRKA-----------DIVAWPTNLGWMMGPWLVY 416 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~---~~~---~~~~~~-----------d~~l~~~~~~~~~~~~~~~ 416 (728)
.++.+|++-... |.+ ...+|.+.+...+... ... .|+.++ |++..+++-+.. ++...+
T Consensus 74 ~p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~e-w~~~~l 148 (746)
T PTZ00342 74 NNNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSIN-WLVADL 148 (746)
T ss_pred cCCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHH-HHHHHH
Confidence 356777653322 221 1356766554433332 232 478887 888777665433 334567
Q ss_pred HHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHHHHHHHHcCCCCCCCCCcCeeEEEeec
Q 004825 417 ASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPSIVRTWKSTNCIDGYDWSSIRCFGSTG 480 (728)
Q Consensus 417 ~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gG 480 (728)
+++..|+..|-......++.+...|++-++.+++..+..+..+.... ..++.++.+++-+
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~----~~~~~l~~ii~~~ 208 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK----NELPHLKKLIILD 208 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh----ccCCCceEEEEEC
Confidence 89999999999887777889999999999999999888887776532 1245677666543
No 177
>PRK13383 acyl-CoA synthetase; Provisional
Probab=42.15 E-value=1.1e+02 Score=34.17 Aligned_cols=84 Identities=12% Similarity=0.026 Sum_probs=61.6
Q ss_pred EecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+...+ .......++.++|++....+-+.+. +..+++.+..|+..+..+.....+.+...+++.++..+..
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~-~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGF-VTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 35655554333 3333456899999998877655543 3456789999999999887777788999999999999998
Q ss_pred cHHHHHHH
Q 004825 452 VPSIVRTW 459 (728)
Q Consensus 452 ~Ps~l~~l 459 (728)
.+.....+
T Consensus 139 ~~~~~~~~ 146 (516)
T PRK13383 139 DNEFAERI 146 (516)
T ss_pred chhHHHHH
Confidence 88766554
No 178
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=41.75 E-value=1.1e+02 Score=35.29 Aligned_cols=96 Identities=17% Similarity=0.072 Sum_probs=67.6
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHH---HHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFK---AAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.++.+|++ +-+..+|. .-.+|.+.+.. .+.......++.++|++...++-+...- ..+++.+..|+..+.+..
T Consensus 65 ~p~~~Al~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v-~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 65 RGEQLALV-TVSSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAV-FAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHhCCEEEecCC
Confidence 45667654 43333332 23567776644 3334445679999999998888775543 456789999999988877
Q ss_pred CCCcchHHHHHHHhCCcEEEecH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVP 453 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P 453 (728)
......+...|++.++.++++..
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 66777899999999999888754
No 179
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=41.69 E-value=1.9e+02 Score=33.85 Aligned_cols=101 Identities=9% Similarity=-0.059 Sum_probs=67.9
Q ss_pred EecCcHHHHHHH---HHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAAA---DAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+...+. ......++.++|++..+++-+... +...++.+..|+..|-......++.+...++..++++++.
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~ 154 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQW-IVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFV 154 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEE
Confidence 356665544333 333456899999998777765553 3446689999999998877677788999999999999998
Q ss_pred cHHHHHHHHcCCCCCCCCCcCeeEEEee
Q 004825 452 VPSIVRTWKSTNCIDGYDWSSIRCFGST 479 (728)
Q Consensus 452 ~Ps~l~~l~~~~~~~~~~l~~lr~i~~g 479 (728)
....+..++.... ...+.++.+++-
T Consensus 155 ~~~~~~~~~~~~~---~~~~~l~~ii~~ 179 (660)
T PLN02430 155 QDKKIKELLEPDC---KSAKRLKAIVSF 179 (660)
T ss_pred CHHHHHHHHhhhc---ccCCCceEEEEE
Confidence 8765444433211 113456666544
No 180
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=41.63 E-value=99 Score=24.46 Aligned_cols=66 Identities=23% Similarity=0.167 Sum_probs=52.7
Q ss_pred eecHHHHHHHHHHHHHH---HHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEE
Q 004825 210 SMTLKELRAEVWLVAYA---LNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAI 286 (728)
Q Consensus 210 ~lTY~eL~~~a~~lA~~---L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~i 286 (728)
..||.||++.-..+++. |.+..+..+|-|+|+-=++.. ..-.+.|+..-+.+++..-+++.++++=
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~-----------Sy~V~Fl~~~~s~eev~~ele~mga~in 77 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTS-----------SYYVVFLEEVESEEEVERELEDMGAEIN 77 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCce-----------eEEEEEEeccCCHHHHHHHHHHhCchhc
Confidence 79999999998876654 556688889999999866642 2345678888899999999999998763
No 181
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=40.74 E-value=1.9e+02 Score=29.83 Aligned_cols=61 Identities=25% Similarity=0.261 Sum_probs=45.5
Q ss_pred HcC-CCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEec
Q 004825 229 ALG-LDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 229 ~~G-v~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 290 (728)
+.| ++||+.|.=...-+.-.-+||.|.++ |.-++.+=|..-..+-..+|+-.++.++++..
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~-Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAMVAAAK-GYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 445 89999777666667777778777776 76666555544445557788999999999987
No 182
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=40.38 E-value=1e+02 Score=35.87 Aligned_cols=79 Identities=10% Similarity=-0.023 Sum_probs=61.6
Q ss_pred EEecCcHHHHH---HHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 374 IPWTNATPFKA---AADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 374 V~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
..+|.+.+... +.......+++++|++...++-+-... ..+++++..|+..+.+.....++.+...|++.++++++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~-~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li 169 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPL-IAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLII 169 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEE
Confidence 56787766443 333445679999999998888776654 34668999999999888777788999999999999998
Q ss_pred ecH
Q 004825 451 VVP 453 (728)
Q Consensus 451 ~~P 453 (728)
+..
T Consensus 170 ~~~ 172 (647)
T PTZ00237 170 TTN 172 (647)
T ss_pred Ecc
Confidence 764
No 183
>PRK13382 acyl-CoA synthetase; Provisional
Probab=40.25 E-value=1.4e+02 Score=33.79 Aligned_cols=82 Identities=20% Similarity=0.018 Sum_probs=60.3
Q ss_pred EecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|...+...+ .......++.++|++....+-+.. .+..+|+.+..|+..+..+......++...+++.++++++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 46666554433 333345688999999888876665 45667899999999998876666678889999999999887
Q ss_pred cHHHHH
Q 004825 452 VPSIVR 457 (728)
Q Consensus 452 ~Ps~l~ 457 (728)
......
T Consensus 147 ~~~~~~ 152 (537)
T PRK13382 147 DEEFSA 152 (537)
T ss_pred chhhHH
Confidence 665443
No 184
>PRK08316 acyl-CoA synthetase; Validated
Probab=40.08 E-value=1.3e+02 Score=33.73 Aligned_cols=86 Identities=21% Similarity=0.121 Sum_probs=63.4
Q ss_pred EEecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 374 IPWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 374 V~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
..+|...+...+... ....++.++|++....+-+... +..+++.+..|+..+..+.......+...+++.++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~-~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAY-ALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 456766654443333 3446889999998888777653 445779999999998887666667888999999999998
Q ss_pred ecHHHHHHHH
Q 004825 451 VVPSIVRTWK 460 (728)
Q Consensus 451 ~~Ps~l~~l~ 460 (728)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8877665543
No 185
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=39.61 E-value=1.3e+02 Score=27.85 Aligned_cols=58 Identities=14% Similarity=0.061 Sum_probs=38.2
Q ss_pred HHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 004825 625 VEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPL 690 (728)
Q Consensus 625 ~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~ 690 (728)
..|.+.+ .+.|+|.+|.|+...+ ..++++-. .. +.+....+++++.+.+.+++.-|.+
T Consensus 57 ~~Ia~~v-~~v~~V~dA~vvVtg~-----~A~Vgv~~-~~-~~~~~~~~~iK~~Va~~Vk~~dp~~ 114 (158)
T TIGR02898 57 DEIASEA-AKVKGVKDATVVITGN-----YAYVGVDL-TN-GLEGSVTDELKEKVAETVKSTDNRI 114 (158)
T ss_pred HHHHHHH-hcCCCCceEEEEEECC-----EEEEEEEc-CC-CcchhhHHHHHHHHHHHHHhhCCCc
Confidence 4566767 4899999999998632 56666643 33 2212345778888888887755543
No 186
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=39.14 E-value=3.1e+02 Score=32.38 Aligned_cols=97 Identities=12% Similarity=0.089 Sum_probs=66.3
Q ss_pred CCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHHcCcEEEec
Q 004825 190 SLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPM--NVNSVVIYLAIVLAGYIVVSI 265 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~--s~~~vva~lA~lkaG~~~vpl 265 (728)
.++.+|++.-..| .+|. .-.+|++.+...+..+.. ..++.++|++..++|- +..+...+++.+..|+..+..
T Consensus 363 ~~~d~a~i~~TSG-TTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~ 438 (718)
T PRK08043 363 QPEDAALILFTSG-SEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLY 438 (718)
T ss_pred CCCCeEEEEECCC-CCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEe
Confidence 5677787665443 3333 357888888766655443 3488999999888875 334556678889999998876
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEec
Q 004825 266 ADSFASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 266 ~p~~~~~~l~~~l~~~~~~~il~~~ 290 (728)
+.......+...+++.++..+....
T Consensus 439 ~~~~~~~~~~~~i~~~~vt~~~~~p 463 (718)
T PRK08043 439 PSPLHYRIVPELVYDRNCTVLFGTS 463 (718)
T ss_pred CCcccHHHHHHHHHhcCCeEEEchH
Confidence 5444455667778888887776554
No 187
>PRK09088 acyl-CoA synthetase; Validated
Probab=39.09 E-value=2e+02 Score=31.88 Aligned_cols=92 Identities=16% Similarity=0.057 Sum_probs=64.3
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHHH---HHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAAA---DAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.|+.+|++-...| ..+|...+...+. ......++.++|++....+-+... +..+++.+..|+..+..+.
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~ 79 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNW 79 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCc
Confidence 3566665432222 3567776644443 333456889999998887766663 3456789999999998887
Q ss_pred CCCcchHHHHHHHhCCcEEEecH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVP 453 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P 453 (728)
......+...+++.+++.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 80 RLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred cCCHHHHHHHHHhCCCCEEEEcc
Confidence 66677889999999999887654
No 188
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=38.66 E-value=1.5e+02 Score=34.65 Aligned_cols=86 Identities=13% Similarity=-0.028 Sum_probs=64.0
Q ss_pred EEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 374 IPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 374 V~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
..+|.+.+...+ .......++.++|++...++-+... +...++.+..|+..|-+......+++...+++.++++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 356777655444 3334557899999998888766553 344678999999999887777778899999999999999
Q ss_pred ecHHHHHHHH
Q 004825 451 VVPSIVRTWK 460 (728)
Q Consensus 451 ~~Ps~l~~l~ 460 (728)
.....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8776665553
No 189
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=38.47 E-value=98 Score=33.27 Aligned_cols=64 Identities=20% Similarity=0.182 Sum_probs=41.0
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCceEEEEec
Q 004825 223 VAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADS-----FASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 223 lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~~ 290 (728)
+...++..++++||.|.+-.+. +.....++...|+.+++++.+ ...+.+...+.. +.++|+...
T Consensus 59 L~~~l~al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~ 127 (376)
T TIGR02379 59 LEMAALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVH 127 (376)
T ss_pred HHHHHHHcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeC
Confidence 4444556689999998875544 334445667889887777643 345667776653 667776443
No 190
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=38.16 E-value=2.2e+02 Score=31.77 Aligned_cols=99 Identities=14% Similarity=0.029 Sum_probs=69.6
Q ss_pred CCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCcEEEec
Q 004825 190 SLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVN--SVVIYLAIVLAGYIVVSI 265 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~--~vva~lA~lkaG~~~vpl 265 (728)
.++.+|.+.-..| .+|. .-.+|++.+...+.... ....+++++|++...++-... +...+++.+..|+..+..
T Consensus 159 ~~~~~a~i~~TSG-TTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 235 (508)
T TIGR02262 159 QADDPAFWLYSSG-STGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLM 235 (508)
T ss_pred CCCCcEEEEeCCC-CCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEe
Confidence 4677887765543 2332 34677887766543322 234489999998888776553 344567788899988887
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEecc
Q 004825 266 ADSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 266 ~p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
++......+...|++.++..+.....
T Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~P~ 261 (508)
T TIGR02262 236 GERPTPDAVFDRLRRHQPTIFYGVPT 261 (508)
T ss_pred CCCCCHHHHHHHHHHHCCcEEecchH
Confidence 77667888999999999999988764
No 191
>PRK07514 malonyl-CoA synthase; Validated
Probab=37.57 E-value=1.4e+02 Score=33.28 Aligned_cols=86 Identities=19% Similarity=0.111 Sum_probs=62.8
Q ss_pred eEEecCcHHHHH---HHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEE
Q 004825 373 AIPWTNATPFKA---AADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTML 449 (728)
Q Consensus 373 gV~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l 449 (728)
+..+|...+... +.......++.++|++....+-+... +..+++.+..|+..+..+.......+...++..+++.+
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~-~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEA-LALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 345776665443 33334557899999998887766443 34567999999999988776667788999999999999
Q ss_pred EecHHHHHHH
Q 004825 450 GVVPSIVRTW 459 (728)
Q Consensus 450 ~~~Ps~l~~l 459 (728)
...+.....+
T Consensus 105 i~~~~~~~~~ 114 (504)
T PRK07514 105 VCDPANFAWL 114 (504)
T ss_pred EEccchhHHH
Confidence 8887766543
No 192
>PLN03102 acyl-activating enzyme; Provisional
Probab=37.26 E-value=1.3e+02 Score=34.51 Aligned_cols=83 Identities=19% Similarity=0.145 Sum_probs=61.4
Q ss_pred EecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+...+... ....++.++|++....+-+... +..+|+.+..|+.++..+.......+...|++.++++++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~-~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAM-YEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 46766665444333 3446899999998887755543 3457789999999988887777788999999999999998
Q ss_pred cHHHHHH
Q 004825 452 VPSIVRT 458 (728)
Q Consensus 452 ~Ps~l~~ 458 (728)
.+.....
T Consensus 118 ~~~~~~~ 124 (579)
T PLN03102 118 DRSFEPL 124 (579)
T ss_pred ChhhHHH
Confidence 7665443
No 193
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=36.75 E-value=96 Score=27.83 Aligned_cols=41 Identities=22% Similarity=0.109 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC---CHHHHHHHHHHHHcCcE
Q 004825 221 WLVAYALNALGLDKGSAIAIDMPM---NVNSVVIYLAIVLAGYI 261 (728)
Q Consensus 221 ~~lA~~L~~~Gv~~gd~Vai~~~~---s~~~vva~lA~lkaG~~ 261 (728)
+.++..|.+.||.+++.|.+++.. +.....+++.+-.+|..
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 578888999999999999999975 55555566666677743
No 194
>PLN02654 acetate-CoA ligase
Probab=36.74 E-value=1.2e+02 Score=35.45 Aligned_cols=80 Identities=15% Similarity=0.098 Sum_probs=61.4
Q ss_pred EEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 374 IPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 374 V~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
..+|.+.+...+ .......+++++|++...++-.... +..+++++..|+..+.+......+.+...|++.++.+++
T Consensus 119 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~-v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li 197 (666)
T PLN02654 119 ASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMEL-PIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVI 197 (666)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEE
Confidence 457777765433 3344567999999999888776554 345678999999999888777778899999999999998
Q ss_pred ecHH
Q 004825 451 VVPS 454 (728)
Q Consensus 451 ~~Ps 454 (728)
+...
T Consensus 198 ~~~~ 201 (666)
T PLN02654 198 TCNA 201 (666)
T ss_pred EcCc
Confidence 7654
No 195
>PRK06188 acyl-CoA synthetase; Validated
Probab=36.48 E-value=3.6e+02 Score=30.09 Aligned_cols=97 Identities=15% Similarity=0.121 Sum_probs=69.5
Q ss_pred CCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCC
Q 004825 190 SLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIAD 267 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p 267 (728)
.++.+|.+.-..| .+|. ...+|++.+...+.. .....+++.++++...+|-+..+...+++.+..|+..+..+
T Consensus 166 ~~~~~a~i~~TSG-tTG~pk~v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~- 240 (524)
T PRK06188 166 LPPDIAGLAYTGG-TTGKPKGVMGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA- 240 (524)
T ss_pred CCCCeEEEEeCCC-CCCCCceeeeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-
Confidence 3455777665543 2222 346788877665443 33456888999999999888766667788888899888775
Q ss_pred CCCHHHHHHHHHhcCceEEEEecc
Q 004825 268 SFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 268 ~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
...++++...+++.++.++.....
T Consensus 241 ~~~~~~~~~~i~~~~~t~~~~~P~ 264 (524)
T PRK06188 241 KFDPAEVLRAIEEQRITATFLVPT 264 (524)
T ss_pred CCCHHHHHHHHHHhCCEEEEehHH
Confidence 456788899999999999887664
No 196
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=36.19 E-value=1.4e+02 Score=38.42 Aligned_cols=99 Identities=17% Similarity=0.080 Sum_probs=66.8
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.|+.+|++...+...+......+|.+.+...+ .+.....++.+++++..+.+-+... +..+++.+..|+..+.++.
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEeccCC
Confidence 46777765432211111123467877665443 3334456899999998888777654 3456799999999998877
Q ss_pred CCCcchHHHHHHHhCCcEEEecH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVP 453 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P 453 (728)
...+.++...++..++..+....
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEec
Confidence 66667788889999988877643
No 197
>PRK06164 acyl-CoA synthetase; Validated
Probab=35.88 E-value=3.2e+02 Score=30.74 Aligned_cols=97 Identities=18% Similarity=0.187 Sum_probs=69.4
Q ss_pred CCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCcEEEecC
Q 004825 190 SLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNV-NSVVIYLAIVLAGYIVVSIA 266 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~-~~vva~lA~lkaG~~~vpl~ 266 (728)
.++.+|++.-..| .+|. .-.+|.+.|...+..++..+ ++.+++++..++|-+. ..+..+++.+..|+..+..
T Consensus 179 ~~~~~~~i~~TSG-tTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~- 253 (540)
T PRK06164 179 DPDAGALLFTTSG-TTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE- 253 (540)
T ss_pred CCCceEEEEECCC-CCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-
Confidence 4678888775443 2222 34678888877666555554 7889999998888643 2335678888889887765
Q ss_pred CCCCHHHHHHHHHhcCceEEEEecc
Q 004825 267 DSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 267 p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
+.....++...+++.++..++....
T Consensus 254 ~~~~~~~~~~~l~~~~~t~~~~~p~ 278 (540)
T PRK06164 254 PVFDAARTARALRRHRVTHTFGNDE 278 (540)
T ss_pred CCCCHHHHHHHHHHhCCeeecCCHH
Confidence 5677888999999999988877654
No 198
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=35.75 E-value=1.9e+02 Score=32.31 Aligned_cols=101 Identities=16% Similarity=0.070 Sum_probs=68.6
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHHHH---HHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAAAD---AWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.|+.+|++.. .+ .|.. -.+|.+.+...+.. .....++.++|+++...+-+...- ..+++.+..|+..+..+.
T Consensus 20 ~p~~~a~~~~-~~-~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~-~~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 20 YGHKTALIFE-SS-GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI-FCWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCCceEEEcc-cC-CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEEcCc
Confidence 4566775442 21 1211 23566655443333 334578999999988877666543 345688999999988877
Q ss_pred CCCcchHHHHHHHhCCcEEEecHHHHHHH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVPSIVRTW 459 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l 459 (728)
...++.+...+++.+++.++..+.....+
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 66778899999999999999888765443
No 199
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=35.20 E-value=57 Score=26.10 Aligned_cols=46 Identities=13% Similarity=0.081 Sum_probs=27.2
Q ss_pred eEEEEeccCCCCCCceeecHHHHHH-HHHHHHHHHHHcCCCCCCEEEEEcCCC
Q 004825 194 IVIRWCDEGDGGLPVKSMTLKELRA-EVWLVAYALNALGLDKGSAIAIDMPMN 245 (728)
Q Consensus 194 ~Al~~~~~~~~~~~~~~lTY~eL~~-~a~~lA~~L~~~Gv~~gd~Vai~~~~s 245 (728)
+|++|.+. -.|-.-+++-.|+.+ |.++++.+|.++|++ |-+-..+|
T Consensus 16 I~vi~e~k--IqGItfslDg~efl~eri~~L~~~L~kRgv~----v~L~~~~S 62 (86)
T PF09153_consen 16 IAVIFEEK--IQGITFSLDGEEFLRERISRLIEFLKKRGVS----VSLDEEPS 62 (86)
T ss_dssp EEEEESSS--EEEEEEESSHHHHHH-HHHHHHHHHHHTT----------B---
T ss_pred EEEEEcCc--eeeEEEEeccHHHHHHHHHHHHHHHHhcCce----eEEeecCC
Confidence 67777664 223344666678877 999999999998764 55555554
No 200
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=35.02 E-value=2e+02 Score=32.37 Aligned_cols=99 Identities=12% Similarity=0.007 Sum_probs=63.7
Q ss_pred CCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCcEEEec
Q 004825 190 SLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALN-ALGLDKGSAIAIDMPMNVNS-VVIYLAIVLAGYIVVSI 265 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~-~~Gv~~gd~Vai~~~~s~~~-vva~lA~lkaG~~~vpl 265 (728)
.++.+|.+.-..| .+|. .-.+|.+.+... ..+..+. ..++.++|++..++|-.-.. ...+++.+..|+..+..
T Consensus 174 ~~~~~~~i~~TSG-TTG~PK~v~~s~~~~~~~--~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~ 250 (539)
T PRK07008 174 DENQASSLCYTSG-TTGNPKGALYSHRSTVLH--AYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLP 250 (539)
T ss_pred CcccceEEEECCC-CCCCCcEEEEecHHHHHH--HHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEe
Confidence 4566666554432 2333 345666665432 2233332 35788999988877754322 22336778899988877
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEecc
Q 004825 266 ADSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 266 ~p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
.+...++.+...+++.++..+.....
T Consensus 251 ~~~~~~~~~~~~l~~~~vt~~~~~P~ 276 (539)
T PRK07008 251 GPDLDGKSLYELIEAERVTFSAGVPT 276 (539)
T ss_pred cCCcCHHHHHHHHHHcCCEEEEechH
Confidence 77788899999999999988877654
No 201
>PRK13388 acyl-CoA synthetase; Provisional
Probab=34.85 E-value=2.2e+02 Score=32.18 Aligned_cols=84 Identities=17% Similarity=0.069 Sum_probs=62.3
Q ss_pred EecCcHHHHHHHHH---HHhcCC-CCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 375 PWTNATPFKAAADA---WCHMDI-RKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
.+|...+...+... ....++ .++|++....+-+...- ..+++.+..|+..+.++.......+...+++.++.+++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v-~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEML-FWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHH-HHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 56777665544443 344678 78999988888766643 45678999999999888766667899999999999998
Q ss_pred ecHHHHHHH
Q 004825 451 VVPSIVRTW 459 (728)
Q Consensus 451 ~~Ps~l~~l 459 (728)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 877655443
No 202
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=34.54 E-value=1.4e+02 Score=34.75 Aligned_cols=79 Identities=19% Similarity=-0.017 Sum_probs=59.7
Q ss_pred EEecCcHHHHHHH---HHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 374 IPWTNATPFKAAA---DAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 374 V~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
..+|.+.+...+. ......+++++|++...++-+.... ..+++++..|+..+.+......+.+...+++.++.+++
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~-~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li 191 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAV-VAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLF 191 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 4577776654433 3335579999999999888776544 34668999999998887766778899999999999888
Q ss_pred ecH
Q 004825 451 VVP 453 (728)
Q Consensus 451 ~~P 453 (728)
+..
T Consensus 192 ~~~ 194 (652)
T TIGR01217 192 TVD 194 (652)
T ss_pred Ecc
Confidence 754
No 203
>PLN02574 4-coumarate--CoA ligase-like
Probab=34.54 E-value=1.6e+02 Score=33.46 Aligned_cols=98 Identities=21% Similarity=0.164 Sum_probs=67.1
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHH---HHHHHHHh-cCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFK---AAADAWCH-MDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYN 429 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~---~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~ 429 (728)
.++.+|++- +.+| ..+|.+.+.. .+...... .++.++|++....+-+... +..+|+.+..|+..+..+
T Consensus 52 ~~~~~a~~~---~~~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 52 HNGDTALID---SSTG----FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYF-PVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cCCCCEEEE---CCCC----CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchH-HHHHHHHHHhCeEEeCcC
Confidence 456666553 2222 1356665533 33333344 7899999998887755443 344678999999999887
Q ss_pred CCCCcchHHHHHHHhCCcEEEecHHHHHHH
Q 004825 430 GSPLGSGFAKFVQDAKVTMLGVVPSIVRTW 459 (728)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l 459 (728)
......++...+++.++..++..+.....+
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 666667888899999999988887766554
No 204
>PRK08308 acyl-CoA synthetase; Validated
Probab=34.41 E-value=5e+02 Score=27.91 Aligned_cols=97 Identities=14% Similarity=0.089 Sum_probs=68.0
Q ss_pred CCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCcEEEec
Q 004825 190 SLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNV--NSVVIYLAIVLAGYIVVSI 265 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~--~~vva~lA~lkaG~~~vpl 265 (728)
.++..|++.-..| .+|. ...+|++.+...+..+.. ..++..+|++..++|-.. .++..++..+..|+..+..
T Consensus 99 ~~~~~~~i~~TSG-tTG~PKgv~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~ 174 (414)
T PRK08308 99 LAEEPSLLQYSSG-TTGEPKLIRRSWTEIDREIEAYNE---ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVII 174 (414)
T ss_pred CCCCceEEEECCC-CCCCCcEEEEehHhHHHHHHHHHH---hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEec
Confidence 4667777665543 2333 346799988766555544 346778898888877653 4456788899999988776
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEecc
Q 004825 266 ADSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 266 ~p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
+ ...++.+...++..++.+++....
T Consensus 175 ~-~~~~~~~~~~l~~~~~t~~~~~P~ 199 (414)
T PRK08308 175 T-NKNPKFALNILRNTPQHILYAVPL 199 (414)
T ss_pred C-CCCHHHHHHHHHHhCCeEEEcCHH
Confidence 4 456777888899999988877654
No 205
>PLN02246 4-coumarate--CoA ligase
Probab=34.23 E-value=1.5e+02 Score=33.50 Aligned_cols=98 Identities=14% Similarity=-0.002 Sum_probs=67.5
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.++.+|++ + +. ++-.+|++.+...+... ....++.++|++....+-+... +..+++.+..|++.+..+.
T Consensus 36 ~~~~~a~~-~--~~----~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 36 FSDRPCLI-D--GA----TGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEF-VLAFLGASRRGAVTTTANP 107 (537)
T ss_pred CCCCeEEE-e--cC----CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHHcCEEEecCCC
Confidence 45677754 2 11 12357887765443333 3456899999998887766443 3446788999999998877
Q ss_pred CCCcchHHHHHHHhCCcEEEecHHHHHHH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVPSIVRTW 459 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l 459 (728)
......+...+++.++..+.........+
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 66667888999999999888776555443
No 206
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=34.21 E-value=1.4e+02 Score=32.01 Aligned_cols=61 Identities=23% Similarity=0.207 Sum_probs=40.3
Q ss_pred HHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCceEEEEec
Q 004825 226 ALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADS-----FASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 226 ~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~~ 290 (728)
.+...++++||.|.+-.+..+.. .-++...|+.++.++.+ ...+.++..+.. +.++|+...
T Consensus 62 ~l~~~~~~~Gd~Viv~~~t~~~~---~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~ 127 (375)
T PRK11706 62 AALLLDIQPGDEVIMPSYTFVST---ANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPVH 127 (375)
T ss_pred HHHHhCCCCCCEEEECCCCcHHH---HHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEeC
Confidence 44445789999988866554433 44567789887777542 456778877754 677776543
No 207
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=33.93 E-value=1.5e+02 Score=34.58 Aligned_cols=95 Identities=15% Similarity=-0.077 Sum_probs=66.8
Q ss_pred CCCceEEEecCCCCCCCceEEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCC
Q 004825 355 VEAFTNILFSSGTTGEPKAIPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGS 431 (728)
Q Consensus 355 ~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~ 431 (728)
++.+|++.... .| ....+|.+.+...+ .......++.++|++....+-+... +..+++.+..|+..+.++..
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-v~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPET-VVAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCcEEEeeCCC
Confidence 56676543221 22 13457777665443 3334557899999999888866554 34567999999999988876
Q ss_pred CCcchHHHHHHHhCCcEEEecHH
Q 004825 432 PLGSGFAKFVQDAKVTMLGVVPS 454 (728)
Q Consensus 432 ~~~~~l~~~i~~~~vt~l~~~Ps 454 (728)
.....+...+++.++.++++...
T Consensus 173 ~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 173 FGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCHHHHHHHHHHcCCcEEEEccc
Confidence 67778999999999998887653
No 208
>PRK08162 acyl-CoA synthetase; Validated
Probab=33.85 E-value=1.6e+02 Score=33.10 Aligned_cols=84 Identities=15% Similarity=0.026 Sum_probs=63.2
Q ss_pred EecCcHHHHHHHHHH---HhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAAADAW---CHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+...+.... ...++.++|++....+-+.... ..+++.+..|+..+..+.......+...+++.+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMV-EAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH-HHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 477776655443333 4468999999988887776543 446788999998888877667788999999999999998
Q ss_pred cHHHHHHH
Q 004825 452 VPSIVRTW 459 (728)
Q Consensus 452 ~Ps~l~~l 459 (728)
.+.....+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 88766544
No 209
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=33.68 E-value=1.6e+02 Score=32.00 Aligned_cols=68 Identities=26% Similarity=0.149 Sum_probs=53.4
Q ss_pred HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEecHH
Q 004825 386 ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVVPS 454 (728)
Q Consensus 386 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps 454 (728)
.......++..+|++....+-+.+ .+..+++.+..|+..+..+.......+...+++.++..+...+.
T Consensus 13 a~~l~~~g~~~gd~v~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 13 AKALKAQGIRSGSRVALVGQNSIE-MVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred HHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 333455789999999988887765 34557799999999998887666778888999999998876654
No 210
>PRK07529 AMP-binding domain protein; Validated
Probab=33.43 E-value=2.4e+02 Score=32.66 Aligned_cols=96 Identities=14% Similarity=0.099 Sum_probs=63.8
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.|+.+|.+.+..+.. ..++..+|.+.+...+ .......+++++|++....+-+... +..+|+.+..|. ++.++.
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi-~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAGI-ANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCE-EEeCCC
Confidence 457777765533211 1234567777664433 3334557899999999888876654 344667777774 444455
Q ss_pred CCCcchHHHHHHHhCCcEEEec
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVV 452 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~ 452 (728)
...++.+...+++.++.+++..
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEe
Confidence 5566789999999999998875
No 211
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.13 E-value=2.1e+02 Score=32.45 Aligned_cols=83 Identities=13% Similarity=0.101 Sum_probs=60.1
Q ss_pred EEecCcHHHHHHHHHH---Hh-cCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEE
Q 004825 374 IPWTNATPFKAAADAW---CH-MDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTML 449 (728)
Q Consensus 374 V~~sh~~l~~~~~~~~---~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l 449 (728)
..+|.+.+...+.... .. .++.++|++..+.+-+... +..+|+.+..|+..+..+......++...+++.++..+
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 3577777655544443 22 4889999999887766554 34567899999999888766666788899999999888
Q ss_pred EecHHHHH
Q 004825 450 GVVPSIVR 457 (728)
Q Consensus 450 ~~~Ps~l~ 457 (728)
+.......
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 87655443
No 212
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=32.50 E-value=1.6e+02 Score=33.45 Aligned_cols=81 Identities=15% Similarity=0.059 Sum_probs=58.1
Q ss_pred EEecCcHHHHHHHHHHH---h-cCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEE
Q 004825 374 IPWTNATPFKAAADAWC---H-MDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTML 449 (728)
Q Consensus 374 V~~sh~~l~~~~~~~~~---~-~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l 449 (728)
..+|...+...+..... . .++.++|++..+.+-+.. .+..+++.+..|+..+..+.......+...+++.++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e-~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ-YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 35677766554443332 2 488999999887776665 345567889999998887765566788999999999888
Q ss_pred EecHHH
Q 004825 450 GVVPSI 455 (728)
Q Consensus 450 ~~~Ps~ 455 (728)
...+.+
T Consensus 127 i~~~~~ 132 (562)
T PRK12492 127 VYLNMF 132 (562)
T ss_pred Eecccc
Confidence 876543
No 213
>PLN02479 acetate-CoA ligase
Probab=32.46 E-value=2.1e+02 Score=32.50 Aligned_cols=82 Identities=17% Similarity=0.065 Sum_probs=60.6
Q ss_pred EecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.++...+...+ .......++.++|++....+-+.+.. ..+++.+..|+..+..+.......+...+++.++..++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~-~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMY-EAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHH-HHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 45666554433 33334568999999988888666543 446689999999998887666778999999999999998
Q ss_pred cHHHHH
Q 004825 452 VPSIVR 457 (728)
Q Consensus 452 ~Ps~l~ 457 (728)
.+..+.
T Consensus 124 ~~~~~~ 129 (567)
T PLN02479 124 DQEFFT 129 (567)
T ss_pred chhhhh
Confidence 776543
No 214
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=31.86 E-value=2.1e+02 Score=31.53 Aligned_cols=50 Identities=14% Similarity=0.068 Sum_probs=34.2
Q ss_pred HHcCCCCCCEEEEEcCCCHHHHHHHHH-HHHcCcEEEec--------------CCCCCHHHHHHHHHhcC
Q 004825 228 NALGLDKGSAIAIDMPMNVNSVVIYLA-IVLAGYIVVSI--------------ADSFASLEISARLRISK 282 (728)
Q Consensus 228 ~~~Gv~~gd~Vai~~~~s~~~vva~lA-~lkaG~~~vpl--------------~p~~~~~~l~~~l~~~~ 282 (728)
...++++||.| .+..++.+.-+ +...|++++-+ .-....+.++..|+..+
T Consensus 110 ~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 110 SRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred HHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 34589999965 34444555555 78889988744 33567889999887654
No 215
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=31.65 E-value=1.8e+02 Score=33.04 Aligned_cols=95 Identities=15% Similarity=0.050 Sum_probs=67.1
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHHHHHH----HhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADAW----CHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYN 429 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~~----~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~ 429 (728)
.++.+|++. .| -.+|.+.+...+.... ...+++++|++..+.+-+... +..+++.+..|+..+..+
T Consensus 38 ~~~~~a~~~--~~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~ 107 (560)
T PRK08751 38 FADRPAYHS--FG-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY-PIATFGVLRAGLTVVNVN 107 (560)
T ss_pred CCCCceEEE--CC-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEeccC
Confidence 356677553 12 2467776655444333 246899999998887766554 345678999999999887
Q ss_pred CCCCcchHHHHHHHhCCcEEEecHHHHHH
Q 004825 430 GSPLGSGFAKFVQDAKVTMLGVVPSIVRT 458 (728)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~ 458 (728)
......++...+.+.+++.++........
T Consensus 108 p~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 108 PLYTPRELKHQLIDSGASVLVVIDNFGTT 136 (560)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEcchhHHH
Confidence 76666788899999999998887665443
No 216
>PRK13391 acyl-CoA synthetase; Provisional
Probab=31.16 E-value=3e+02 Score=30.72 Aligned_cols=97 Identities=15% Similarity=0.062 Sum_probs=67.3
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.|+.+|.+.+.+| + .+|...+...+ .......++.+++++..+.+-+...- ..+++.+..|+..+..+.
T Consensus 10 ~p~~~a~~~~~~~-----~--~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~-~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-----E--VVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYL-EVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-----C--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhccEEecccc
Confidence 4566766554432 2 36666554433 33334568899999988777666543 346689999999998877
Q ss_pred CCCcchHHHHHHHhCCcEEEecHHHHHH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVPSIVRT 458 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps~l~~ 458 (728)
......+...+++.++..+...+.....
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 6667788899999999998887765543
No 217
>PRK07470 acyl-CoA synthetase; Validated
Probab=31.03 E-value=2.3e+02 Score=31.77 Aligned_cols=82 Identities=16% Similarity=0.033 Sum_probs=60.0
Q ss_pred EecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+...+ .......++.++|++....+-+.... ..+++.+..|+..+..+.......+...+++.+++.++.
T Consensus 32 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~-~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~ 110 (528)
T PRK07470 32 SWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMF-ESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMIC 110 (528)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEE
Confidence 46766654433 33334568999999988877666543 345689999999888877666678899999999999988
Q ss_pred cHHHHH
Q 004825 452 VPSIVR 457 (728)
Q Consensus 452 ~Ps~l~ 457 (728)
.+....
T Consensus 111 ~~~~~~ 116 (528)
T PRK07470 111 HADFPE 116 (528)
T ss_pred cchhHH
Confidence 766543
No 218
>PRK07798 acyl-CoA synthetase; Validated
Probab=30.98 E-value=2.3e+02 Score=31.67 Aligned_cols=86 Identities=10% Similarity=-0.090 Sum_probs=61.1
Q ss_pred EEecCcHHHHH---HHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 374 IPWTNATPFKA---AADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 374 V~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
-.+|...+... +.......++.++|++....+-+.+. +..+|+.+..|+..+..+.......+...+++.++..++
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~-~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEY-VEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 35666665443 33334457899999988877655443 344678899999999887666667889999999999998
Q ss_pred ecHHHHHHHH
Q 004825 451 VVPSIVRTWK 460 (728)
Q Consensus 451 ~~Ps~l~~l~ 460 (728)
........+.
T Consensus 106 ~~~~~~~~~~ 115 (533)
T PRK07798 106 YEREFAPRVA 115 (533)
T ss_pred EchhhHHHHH
Confidence 8876655543
No 219
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=30.53 E-value=1.9e+02 Score=32.26 Aligned_cols=83 Identities=17% Similarity=0.089 Sum_probs=61.0
Q ss_pred ecCcHH---HHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEec
Q 004825 376 WTNATP---FKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVV 452 (728)
Q Consensus 376 ~sh~~l---~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~ 452 (728)
+|...+ ++.+.......++.++|++..+.+-+... +..+++.+..|+..+..+.......+...+++.+++.++..
T Consensus 12 ~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~~ 90 (509)
T PRK12406 12 RSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAF-FEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIAH 90 (509)
T ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEEc
Confidence 454444 33334444557899999998887766654 34566889999999988776667788999999999999887
Q ss_pred HHHHHHH
Q 004825 453 PSIVRTW 459 (728)
Q Consensus 453 Ps~l~~l 459 (728)
......+
T Consensus 91 ~~~~~~~ 97 (509)
T PRK12406 91 ADLLHGL 97 (509)
T ss_pred cchhhhh
Confidence 7666654
No 220
>PRK05857 acyl-CoA synthetase; Validated
Probab=30.53 E-value=1.6e+02 Score=33.19 Aligned_cols=94 Identities=15% Similarity=0.038 Sum_probs=66.3
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.|+.+|.+. ..| ...+|.+.+...+... ....++.++|++..+.+-+...- ..+|+.+..|+..+.++.
T Consensus 27 ~p~~~a~~~-~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~-~~~lA~~~~G~v~v~l~~ 98 (540)
T PRK05857 27 QPEAIALRR-CDG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETY-LSVLACAKLGAIAVMADG 98 (540)
T ss_pred CCCcEEEee-cCC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEecCc
Confidence 456666543 222 1357777765444333 34568899999998887776654 446789999999998887
Q ss_pred CCCcchHHHHHHHhCCcEEEecHHH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVPSI 455 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps~ 455 (728)
....+.+..+++..++..++..+..
T Consensus 99 ~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 99 NLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred cCCHHHHHHHHHhcCCceEEEeccc
Confidence 6677788899999998888877653
No 221
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=30.44 E-value=2e+02 Score=32.48 Aligned_cols=97 Identities=11% Similarity=0.069 Sum_probs=64.9
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.|+.+|++.+-..+. .+..+|.+.+...+ .......++.+++++....+-+... +..+++.+..|+.++..+.
T Consensus 35 ~p~~~a~~~~~~~~~---~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~ 110 (538)
T TIGR03208 35 CPDKPALTAYRDGHG---AVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEF-TALYLACARIGAVLNPLMP 110 (538)
T ss_pred CCCceEEEeecccCC---CcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeccCc
Confidence 456677665422111 13457777654433 3333456899999998887766554 3446788999999887766
Q ss_pred CCCcchHHHHHHHhCCcEEEecHH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVPS 454 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps 454 (728)
......+...++..+++.+...+.
T Consensus 111 ~~~~~~l~~~l~~~~~~~li~~~~ 134 (538)
T TIGR03208 111 IFRERELSFMLNHADSKVFVVPSV 134 (538)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 556678888999999988887553
No 222
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=30.13 E-value=2.4e+02 Score=31.04 Aligned_cols=83 Identities=20% Similarity=0.097 Sum_probs=61.1
Q ss_pred EecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|...+...+... ....++.++|++....+-+.+. +..+++.+..|+..+.++.......+...+++.++..+..
T Consensus 27 ~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~ 105 (483)
T PRK03640 27 KVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEM-ILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLIT 105 (483)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEE
Confidence 47776665444333 3456789999998888877664 5567799999999999887666778888999999888877
Q ss_pred cHHHHHH
Q 004825 452 VPSIVRT 458 (728)
Q Consensus 452 ~Ps~l~~ 458 (728)
.......
T Consensus 106 ~~~~~~~ 112 (483)
T PRK03640 106 DDDFEAK 112 (483)
T ss_pred cchhhHH
Confidence 6554433
No 223
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=29.80 E-value=1.7e+02 Score=33.23 Aligned_cols=79 Identities=14% Similarity=-0.032 Sum_probs=58.5
Q ss_pred EecCcHHHHHHH---HHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAAA---DAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+...+. ......++.++|++....+-+...- ..+++.+..|+..+..+......++...+++.+++++..
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~-~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~ 110 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYL-EWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVT 110 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEE
Confidence 466666554433 3334568999999998877665543 346788999999998887667788999999999988887
Q ss_pred cHH
Q 004825 452 VPS 454 (728)
Q Consensus 452 ~Ps 454 (728)
.+.
T Consensus 111 ~~~ 113 (563)
T PLN02860 111 DET 113 (563)
T ss_pred ecc
Confidence 653
No 224
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.71 E-value=4.7e+02 Score=29.54 Aligned_cols=93 Identities=17% Similarity=0.050 Sum_probs=65.1
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.++.+|.+...-+. .+|.+.+...+... ....++.++|++....+-+..+ +..+|+++..|+..+.++.
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~-~~~~~a~~~~Gav~vpln~ 95 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEF-LIAFLAALRAGAVAVPLNP 95 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeecCc
Confidence 45666655443322 77877765544443 3445688999988777755443 3456788999999999987
Q ss_pred CCCcchHHHHHHHhCCcEEEecHH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVPS 454 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps 454 (728)
......+...++..++..++....
T Consensus 96 ~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 96 RLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 666778888888888988888766
No 225
>PRK06178 acyl-CoA synthetase; Validated
Probab=29.59 E-value=2.6e+02 Score=31.73 Aligned_cols=85 Identities=13% Similarity=-0.065 Sum_probs=62.9
Q ss_pred EecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|...+...+... ....++++++++....+-+... +..+++.+..|+..+..+.......+...+++.++..++.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQF-HIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHH-HHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 46776665444333 3346889999998877766653 3456788999999888776666678999999999999999
Q ss_pred cHHHHHHHH
Q 004825 452 VPSIVRTWK 460 (728)
Q Consensus 452 ~Ps~l~~l~ 460 (728)
.+.....+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 888766554
No 226
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=29.45 E-value=18 Score=27.19 Aligned_cols=11 Identities=36% Similarity=0.534 Sum_probs=9.0
Q ss_pred CCCceeEEeCc
Q 004825 585 RNGQILRRHGD 595 (728)
Q Consensus 585 ~~g~~~y~TGD 595 (728)
.+|..||.|||
T Consensus 69 dngkhwydtgd 79 (80)
T PF05452_consen 69 DNGKHWYDTGD 79 (80)
T ss_pred cCCcccccCCC
Confidence 44778999998
No 227
>PRK07638 acyl-CoA synthetase; Validated
Probab=29.30 E-value=5.3e+02 Score=28.39 Aligned_cols=96 Identities=7% Similarity=0.040 Sum_probs=64.2
Q ss_pred CCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCcEEEecCCC
Q 004825 192 DDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVN-SVVIYLAIVLAGYIVVSIADS 268 (728)
Q Consensus 192 d~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~-~vva~lA~lkaG~~~vpl~p~ 268 (728)
+.+|.+.-..| .+|. .-.+|.+.+...+... ....+++++|++....+-... .+..++..+..|+..+.. +.
T Consensus 143 ~~~a~i~~TSG-tTG~PKgv~~s~~~~~~~~~~~---~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~ 217 (487)
T PRK07638 143 NAPFYMGFTSG-STGKPKAFLRAQQSWLHSFDCN---VHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RK 217 (487)
T ss_pred CCcEEEEeCCC-CCCCCcEEEEecHHHHHHHHHH---HHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CC
Confidence 44455444332 2333 3467777775554433 344578899999887665443 345667778889988865 56
Q ss_pred CCHHHHHHHHHhcCceEEEEecce
Q 004825 269 FASLEISARLRISKAKAIFTQDLI 292 (728)
Q Consensus 269 ~~~~~l~~~l~~~~~~~il~~~~~ 292 (728)
..++++...+++.++.++......
T Consensus 218 ~~~~~~~~~i~~~~~t~~~~~P~~ 241 (487)
T PRK07638 218 FIPNQVLDKLETENISVMYTVPTM 241 (487)
T ss_pred CCHHHHHHHHHHcCCeEEEeCcHH
Confidence 778889999999999999887643
No 228
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.58 E-value=2.5e+02 Score=31.60 Aligned_cols=85 Identities=16% Similarity=0.042 Sum_probs=61.9
Q ss_pred EecCcHHHHHHHHH---HHhc-CCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 375 PWTNATPFKAAADA---WCHM-DIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
.+|.+.+...+... .... ++.++|++....+-+.. .+..+++.+..|+..+..+.......+...+++.+++.+.
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQ-FVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChH-HHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 46777664444333 2334 89999999887775543 3455778999999999887666677899999999999998
Q ss_pred ecHHHHHHHH
Q 004825 451 VVPSIVRTWK 460 (728)
Q Consensus 451 ~~Ps~l~~l~ 460 (728)
..+.....+.
T Consensus 114 ~~~~~~~~~~ 123 (546)
T PRK08314 114 VGSELAPKVA 123 (546)
T ss_pred EccchhhhHH
Confidence 8877655543
No 229
>PLN02565 cysteine synthase
Probab=28.46 E-value=4.1e+02 Score=27.78 Aligned_cols=67 Identities=18% Similarity=0.194 Sum_probs=45.3
Q ss_pred HHHHHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEec
Q 004825 224 AYALNALGL-DKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 224 A~~L~~~Gv-~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 290 (728)
-..+.+.|. .+|....|....+-.-+..-+++...|.-++.+-|...+......++..++++++++.
T Consensus 54 l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 54 ITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred HHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 334445564 7885544544444444445556667898877766766666777788999999999875
No 230
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=27.82 E-value=1.9e+02 Score=31.79 Aligned_cols=58 Identities=17% Similarity=0.138 Sum_probs=38.3
Q ss_pred HcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCceEEEEec
Q 004825 229 ALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADS-----FASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 229 ~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~~ 290 (728)
+.++++||.|.+..+... ....++...|+..+++|.+ ...+.++..+.. +.++|+...
T Consensus 105 ~~~~~pGd~VIv~~~t~~---a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~ 167 (438)
T PRK15407 105 DRALKPGDEVITVAAGFP---TTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAH 167 (438)
T ss_pred ccCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeC
Confidence 348999999887665443 3445666789887776543 356677776653 567776654
No 231
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=27.79 E-value=58 Score=25.29 Aligned_cols=23 Identities=26% Similarity=0.303 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEE
Q 004825 219 EVWLVAYALNALGLDKGSAIAID 241 (728)
Q Consensus 219 ~a~~lA~~L~~~Gv~~gd~Vai~ 241 (728)
+...+-..|++.|+++||.|-|.
T Consensus 41 ~~~Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 41 KKLGVEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHCCHHHHHHHcCCCCCCEEEEc
Confidence 33445566788999999999885
No 232
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=27.49 E-value=2.8e+02 Score=29.70 Aligned_cols=67 Identities=19% Similarity=0.104 Sum_probs=43.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCC-----CCCHHHHHHHHHh---cCceEEEEec
Q 004825 221 WLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIAD-----SFASLEISARLRI---SKAKAIFTQD 290 (728)
Q Consensus 221 ~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p-----~~~~~~l~~~l~~---~~~~~il~~~ 290 (728)
..+...+...++++||.|.+-.+.. ....-++...|+.++.++. ....+.++..++. .+.++|+...
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~ 129 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITF---VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD 129 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcch---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC
Confidence 4555566667889999977766543 3334556778887766543 2467788888864 3567776543
No 233
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=27.43 E-value=1.2e+02 Score=24.20 Aligned_cols=43 Identities=16% Similarity=0.138 Sum_probs=36.3
Q ss_pred HHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecC
Q 004825 224 AYALNAL-GLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIA 266 (728)
Q Consensus 224 A~~L~~~-Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~ 266 (728)
..+|.+. ||+.|+.++-+...-.|.+.++=+.+|+.-+-+-..
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~~~ 46 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELATF 46 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeEee
Confidence 3567665 999999999999999999999999999987766443
No 234
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=27.39 E-value=91 Score=29.80 Aligned_cols=33 Identities=18% Similarity=0.213 Sum_probs=29.0
Q ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 004825 209 KSMTLKELRAEVWLVAYALNALGLDKGSAIAID 241 (728)
Q Consensus 209 ~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~ 241 (728)
.-+||.++.+.+.++|..+++.|.+|+-.|||.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 368999999999999999999999998666654
No 235
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=27.37 E-value=2e+02 Score=32.53 Aligned_cols=84 Identities=13% Similarity=0.051 Sum_probs=60.7
Q ss_pred EEecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 374 IPWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 374 V~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
..+|.+.+...+... ....++.++|++....+-+.... ..+++.+..|+..+..+......++...+++.++..+.
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 132 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYG-IVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIV 132 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH-HHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEE
Confidence 457877765544433 34568899999988877666543 44678999999988777655567888999999998887
Q ss_pred ecHHHHHH
Q 004825 451 VVPSIVRT 458 (728)
Q Consensus 451 ~~Ps~l~~ 458 (728)
..+..+..
T Consensus 133 ~~~~~~~~ 140 (546)
T PLN02330 133 TNDTNYGK 140 (546)
T ss_pred Eccchhhh
Confidence 76655443
No 236
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.25 E-value=2.3e+02 Score=31.48 Aligned_cols=83 Identities=18% Similarity=0.062 Sum_probs=60.1
Q ss_pred ecCcHHH---HHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEec
Q 004825 376 WTNATPF---KAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGVV 452 (728)
Q Consensus 376 ~sh~~l~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~ 452 (728)
+|...+. ..+.......+++++|++....+-+.+.- ..+++.+..|+..+..+.......+...+++.+++.+...
T Consensus 12 ~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~-~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 12 VTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFF-EVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHH-HHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 4544443 33333345578999999998877775543 4467999999999988766666778889999999998888
Q ss_pred HHHHHHH
Q 004825 453 PSIVRTW 459 (728)
Q Consensus 453 Ps~l~~l 459 (728)
+.....+
T Consensus 91 ~~~~~~~ 97 (502)
T PRK08276 91 AALADTA 97 (502)
T ss_pred cchhhHH
Confidence 7666554
No 237
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=27.02 E-value=2.6e+02 Score=31.58 Aligned_cols=84 Identities=13% Similarity=-0.037 Sum_probs=61.7
Q ss_pred EEecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 374 IPWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 374 V~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
..+|...+...+... ....++.++|++....+-+...- ..+++.+..|+..+..+.......+...+++.+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~-~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYP-VAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 457887775544333 34468999999988777665543 34578999999999887666667888999999999988
Q ss_pred ecHHHHHH
Q 004825 451 VVPSIVRT 458 (728)
Q Consensus 451 ~~Ps~l~~ 458 (728)
........
T Consensus 126 ~~~~~~~~ 133 (557)
T PRK07059 126 VLENFATT 133 (557)
T ss_pred EchhhHHH
Confidence 87765443
No 238
>PRK05934 type III secretion system protein; Validated
Probab=26.98 E-value=2.9e+02 Score=28.48 Aligned_cols=72 Identities=11% Similarity=0.114 Sum_probs=49.1
Q ss_pred HHHHHHHhcCCCCeeeeEE-EeecCCCCCceEEEEEEEe--cCCCCCCCCHHHHHHHHHHHHHhhCCCCcccceEEECCC
Q 004825 625 VEIERICNAVDSNVLETAA-IGVPPPDGGPEQLTIVVVF--KDSNYTPPDLNQLRMSFNSAVQKKLNPLFKVSHVVPLPS 701 (728)
Q Consensus 625 ~eIE~~l~~~~p~V~~~~V-v~~~~~~~g~~~l~a~vv~--~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~ 701 (728)
+|+++.|. ..++|.+|-| ++.+++...+....|-|+. .+ |. ..+.+++ +.|.+.+....|. +-|..+.++|+
T Consensus 74 GELaRTIe-sld~VesARVHLAlPe~s~~~~~pTASVvLtL~~-G~-tLs~~QV-~gIvnLVAsSVpG-LtpEnVTVVDq 148 (341)
T PRK05934 74 EQLEKDLT-MFHPVAQATVALSLETEDDPMSPAEISVILSLPK-AE-TLSPSLL-HSITDYLTSSVPG-LTKEHITLSDN 148 (341)
T ss_pred HHHHHHHH-cccCcceeEEEEeCCCCCccCCCCceEEEEecCC-CC-cCCHHHH-HHHHHHHHhcCCC-CCccCeEEECC
Confidence 58888885 8899999988 4555543322344454444 44 44 4565554 5678888888875 88999999996
No 239
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=26.83 E-value=2.4e+02 Score=21.47 Aligned_cols=54 Identities=15% Similarity=0.135 Sum_probs=35.5
Q ss_pred ecHHHHHHHHhcCCCCeeeeEEEeecCCCCCceEEEEEEEecCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 004825 622 VSSVEIERICNAVDSNVLETAAIGVPPPDGGPEQLTIVVVFKDSNYTPPDLNQLRMSFNSAVQKKLNPL 690 (728)
Q Consensus 622 i~~~eIE~~l~~~~p~V~~~~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~~l~~~l~~~l~~~Lp~~ 690 (728)
-...++.+.| +.+|+|.+|..+.- +..+.+.+..+ +.+++.+.+.+.+ ..+|..
T Consensus 10 ~~~~~~~~~l-~~~p~V~~~~~vtG------~~d~~~~v~~~-------d~~~l~~~i~~~l-~~~~gV 63 (74)
T PF01037_consen 10 DAYDEFAEAL-AEIPEVVECYSVTG------EYDLILKVRAR-------DMEELEEFIREKL-RSIPGV 63 (74)
T ss_dssp THHHHHHHHH-HTSTTEEEEEEESS------SSSEEEEEEES-------SHHHHHHHHHHTH-HTSTTE
T ss_pred chHHHHHHHH-HcCCCEEEEEEEeC------CCCEEEEEEEC-------CHHHHHHHHHHHh-hcCCCE
Confidence 4467888989 49999999987752 24566666554 3566776655545 345543
No 240
>PLN02409 serine--glyoxylate aminotransaminase
Probab=26.76 E-value=3e+02 Score=29.75 Aligned_cols=74 Identities=11% Similarity=-0.064 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEec
Q 004825 217 RAEVWLVAYALNAL-GLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 217 ~~~a~~lA~~L~~~-Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 290 (728)
.+...++...|++. |..+++.|.+-..-+..+..++..+++.|-.++..++.+...+...+++..+.+++....
T Consensus 41 ~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~ 115 (401)
T PLN02409 41 PALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVES 115 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEEC
Confidence 33444444444443 665555544444333344444555667887777777888777777788888888777653
No 241
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=26.64 E-value=4.4e+02 Score=27.04 Aligned_cols=65 Identities=17% Similarity=0.221 Sum_probs=41.7
Q ss_pred HHHHcC-CCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecc
Q 004825 226 ALNALG-LDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 226 ~L~~~G-v~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
...+.| +.+|+.|.-. ..+-.-...-+++.+.|..+..+-|..-++.....++..+++++++...
T Consensus 47 ~a~~~g~~~~g~~vv~a-SsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 47 DAEKRGLLKPGKTIVEP-TSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHcCCCCCCCEEEEe-CCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 444556 4778877444 4444444444566668987666666443344577789999999999763
No 242
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=26.61 E-value=3.8e+02 Score=28.69 Aligned_cols=62 Identities=18% Similarity=0.279 Sum_probs=44.1
Q ss_pred HcC-CCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEec
Q 004825 229 ALG-LDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 229 ~~G-v~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 290 (728)
+.| ++||....|....+-.-+..-+++...|.-++.+-|...+..-..+++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 445 67885444555566666666667788898777776765556667889999999999874
No 243
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=26.57 E-value=2.8e+02 Score=32.68 Aligned_cols=87 Identities=11% Similarity=0.039 Sum_probs=62.6
Q ss_pred eEEecCcHHHHHHHH---HHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEE
Q 004825 373 AIPWTNATPFKAAAD---AWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTML 449 (728)
Q Consensus 373 gV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l 449 (728)
...+|.+.+...+.. .....++.++|++...++-+... +...++.+..|+..+-......++++...+++.++.++
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 197 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEW-LASIYGIWSQSMVAATVYANLGEDALAYALRETECKAI 197 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEE
Confidence 456777766544433 34557899999998877765443 34466889999988877665666788889999999999
Q ss_pred EecHHHHHHHH
Q 004825 450 GVVPSIVRTWK 460 (728)
Q Consensus 450 ~~~Ps~l~~l~ 460 (728)
+.....+..+.
T Consensus 198 v~~~~~~~~l~ 208 (700)
T PTZ00216 198 VCNGKNVPNLL 208 (700)
T ss_pred EECHHHHHHHH
Confidence 88776655543
No 244
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=26.53 E-value=2e+02 Score=32.41 Aligned_cols=85 Identities=19% Similarity=0.041 Sum_probs=61.4
Q ss_pred EEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 374 IPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 374 V~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
..+|.+.+...+ .......++.++|++....+-+..... .+++.+..|+..+..+.......+...+++.++..+.
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~-~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLE-AWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH-HHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 356777664433 333445789999999888776666544 4668889999998887766677889999999999988
Q ss_pred ecHHHHHHH
Q 004825 451 VVPSIVRTW 459 (728)
Q Consensus 451 ~~Ps~l~~l 459 (728)
........+
T Consensus 117 ~~~~~~~~~ 125 (542)
T PRK06018 117 TDLTFVPIL 125 (542)
T ss_pred EccccHHHH
Confidence 776544433
No 245
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=26.33 E-value=1.4e+02 Score=25.50 Aligned_cols=40 Identities=25% Similarity=0.359 Sum_probs=31.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Q 004825 221 WLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGY 260 (728)
Q Consensus 221 ~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~ 260 (728)
+.+...+...|+.+++.|.++|.++.....+...+..+|.
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 4566677788999999999999988777777777777775
No 246
>PRK07867 acyl-CoA synthetase; Validated
Probab=26.13 E-value=3.1e+02 Score=30.86 Aligned_cols=83 Identities=13% Similarity=0.023 Sum_probs=59.4
Q ss_pred EecCcHHHHHHHHHH---Hh-cCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEE
Q 004825 375 PWTNATPFKAAADAW---CH-MDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLG 450 (728)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~ 450 (728)
.+|...+...+.... .. .+..+++++....+-+... +..+++.+..|+.++.++....++++...+++.++.+++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEF-SLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 467666544433332 22 3677888887777755543 345678999999999888777778899999999999999
Q ss_pred ecHHHHHH
Q 004825 451 VVPSIVRT 458 (728)
Q Consensus 451 ~~Ps~l~~ 458 (728)
........
T Consensus 107 ~~~~~~~~ 114 (529)
T PRK07867 107 TESAHAEL 114 (529)
T ss_pred ECHhHHHH
Confidence 88766653
No 247
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=25.94 E-value=1.6e+02 Score=27.77 Aligned_cols=47 Identities=13% Similarity=-0.058 Sum_probs=36.0
Q ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Q 004825 209 KSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIV 256 (728)
Q Consensus 209 ~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~l 256 (728)
.-+||.|+.+.+.++|..+.+. .+....|.|...++-..++..||-.
T Consensus 15 ~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~~ 61 (181)
T PRK09162 15 CLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLPR 61 (181)
T ss_pred EeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHHH
Confidence 3799999999999999999985 2223346677778877777777643
No 248
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.41 E-value=2.7e+02 Score=31.75 Aligned_cols=85 Identities=14% Similarity=-0.013 Sum_probs=62.2
Q ss_pred EEecCcHHHHHHHHHH---H-hcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEE
Q 004825 374 IPWTNATPFKAAADAW---C-HMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTML 449 (728)
Q Consensus 374 V~~sh~~l~~~~~~~~---~-~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l 449 (728)
-.+|.+.+...+.... . ..++.++|++....+-+.... ..+++.+..|+..+..+.......+...++..++..+
T Consensus 37 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~-~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 115 (576)
T PRK05620 37 EQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHL-EVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVI 115 (576)
T ss_pred EEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHH-HHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEE
Confidence 4567666544433332 2 368899999988877666543 4467889999999988776667789999999999999
Q ss_pred EecHHHHHHH
Q 004825 450 GVVPSIVRTW 459 (728)
Q Consensus 450 ~~~Ps~l~~l 459 (728)
+..+.....+
T Consensus 116 i~~~~~~~~~ 125 (576)
T PRK05620 116 VADPRLAEQL 125 (576)
T ss_pred EEChhhHHHH
Confidence 9887665544
No 249
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=25.01 E-value=2.3e+02 Score=31.98 Aligned_cols=90 Identities=17% Similarity=0.008 Sum_probs=62.0
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.|+.+|++ +.. | ..+|.+.+...+ .......++.++|++....+-+.. .+..+++++..|+..+..+.
T Consensus 36 ~pd~~a~~-~~~---~----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 106 (547)
T PRK06087 36 MPDKIAVV-DNH---G----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCE-FTIIYLACLKVGAVSVPLLP 106 (547)
T ss_pred CCCceEEE-cCC---C----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEeccch
Confidence 45666654 322 2 346776664433 333345789999999887765544 34567799999999888876
Q ss_pred CCCcchHHHHHHHhCCcEEEec
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVV 452 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~ 452 (728)
......+...++..++.+++..
T Consensus 107 ~~~~~~l~~~l~~~~~~~l~~~ 128 (547)
T PRK06087 107 SWREAELVWVLNKCQAKMFFAP 128 (547)
T ss_pred hcCHHHHHHHHHhcCCeEEEEe
Confidence 6666788889999999888764
No 250
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.92 E-value=3.2e+02 Score=30.79 Aligned_cols=83 Identities=16% Similarity=-0.071 Sum_probs=59.3
Q ss_pred EecCcHHHHHHHH---HHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAAAD---AWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|...+...+.. .....++.+++++....+-+... +..+++.+..|+..+..+.......+...+++.++..+..
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 4666666444333 23446889999988777655543 4457788999999998876666678888999999998888
Q ss_pred cHHHHHH
Q 004825 452 VPSIVRT 458 (728)
Q Consensus 452 ~Ps~l~~ 458 (728)
.+.....
T Consensus 121 ~~~~~~~ 127 (542)
T PRK07786 121 EAALAPV 127 (542)
T ss_pred ccchHHH
Confidence 7765543
No 251
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=24.55 E-value=1.7e+02 Score=24.34 Aligned_cols=40 Identities=13% Similarity=-0.074 Sum_probs=31.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Q 004825 221 WLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGY 260 (728)
Q Consensus 221 ~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~ 260 (728)
+.+...+...|+.+++.|.++|.++.....+...+.+.|.
T Consensus 52 ~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~ 91 (106)
T cd01519 52 EEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGY 91 (106)
T ss_pred HHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCC
Confidence 3566777777888899999999998877677777778885
No 252
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=24.37 E-value=1.1e+02 Score=30.53 Aligned_cols=72 Identities=24% Similarity=0.155 Sum_probs=54.8
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCC--HHHHHHHHH-hcCceEEEEecceec
Q 004825 223 VAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFA--SLEISARLR-ISKAKAIFTQDLIIR 294 (728)
Q Consensus 223 lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~--~~~l~~~l~-~~~~~~il~~~~~~~ 294 (728)
+-..+.+.-.-||.-=.+.+|.+..|.+.--++--++.+-||++|+++ .+++..+++ ++.+|+++..+..-.
T Consensus 98 ~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPgNP 172 (375)
T KOG0633|consen 98 LIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPGNP 172 (375)
T ss_pred HHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCCCC
Confidence 334455555668855557788899998888899999999999999765 678888776 569999998775433
No 253
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=24.33 E-value=56 Score=25.37 Aligned_cols=31 Identities=23% Similarity=0.239 Sum_probs=19.3
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 004825 210 SMTLKELRAEVWLVAYALNALGLDKGSAIAI 240 (728)
Q Consensus 210 ~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai 240 (728)
.+.|-+-.-+...+-..|++.|+++||.|-|
T Consensus 32 ~~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 32 SLRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp GHHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 4444444445556667788899999999977
No 254
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=24.29 E-value=2.7e+02 Score=29.81 Aligned_cols=65 Identities=25% Similarity=0.204 Sum_probs=41.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCC-----CCHHHHHHHHHhcCceEEEEe
Q 004825 221 WLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADS-----FASLEISARLRISKAKAIFTQ 289 (728)
Q Consensus 221 ~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~ 289 (728)
..+...|...++++||.|.+..+.. .....++...|+.++.+|.+ ...+.++..+.. +.++|+..
T Consensus 59 ~al~lal~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~ 128 (379)
T PRK11658 59 AGMHITLMALGIGPGDEVITPSLTW---VSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPV 128 (379)
T ss_pred HHHHHHHHHcCCCCCCEEEECCCcH---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEe
Confidence 3444556667889999887655433 33334566788888776542 356777777753 56777643
No 255
>PRK07787 acyl-CoA synthetase; Validated
Probab=23.99 E-value=7.9e+02 Score=26.88 Aligned_cols=96 Identities=14% Similarity=0.074 Sum_probs=65.8
Q ss_pred CCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHHcCcEEEec
Q 004825 190 SLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPM--NVNSVVIYLAIVLAGYIVVSI 265 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~--s~~~vva~lA~lkaG~~~vpl 265 (728)
.++.+|++.-..| .+|. .-.+|++.+...+..++. ..++.+++++...+|- +..++..+++.+..|+..+..
T Consensus 126 ~~~~~a~i~~TSG-TTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 201 (471)
T PRK07787 126 DPDAPALIVYTSG-TTGPPKGVVLSRRAIAADLDALAE---AWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHT 201 (471)
T ss_pred CCCceEEEEECCC-CCCCCCEEEEeHHHHHHHHHHHHH---hcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEec
Confidence 4677777665443 2333 346788888776655554 3478889988766664 334567789999999998877
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEecc
Q 004825 266 ADSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 266 ~p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
+ ...++++...++ .++..+.+...
T Consensus 202 ~-~~~~~~~~~~i~-~~~t~~~~~P~ 225 (471)
T PRK07787 202 G-RPTPEAYAQALS-EGGTLYFGVPT 225 (471)
T ss_pred C-CCCHHHHHHHHh-hCceEEEcchH
Confidence 5 456778888888 78877766553
No 256
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=23.84 E-value=5.1e+02 Score=27.82 Aligned_cols=53 Identities=15% Similarity=0.010 Sum_probs=45.5
Q ss_pred EEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecce
Q 004825 240 IDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLI 292 (728)
Q Consensus 240 i~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~ 292 (728)
|++.-+-....+.+++.+.|.....+-|...+..--..+++.++.+++.-+..
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~ 170 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDW 170 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccH
Confidence 66666777788889999999999888899989988889999999999987643
No 257
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=23.56 E-value=4.6e+02 Score=28.19 Aligned_cols=60 Identities=15% Similarity=0.097 Sum_probs=28.7
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecce
Q 004825 232 LDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDLI 292 (728)
Q Consensus 232 v~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~ 292 (728)
+++||.|.+..+.-......+-.+.+.+++-+.+.+....+.+...++. ++++|+.....
T Consensus 87 l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~-~tklV~l~~p~ 146 (382)
T TIGR02080 87 LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQ-KPKLVLIETPS 146 (382)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEECCC
Confidence 5577776554443332332222334444444443333345556665543 46666655433
No 258
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=23.44 E-value=4.2e+02 Score=29.07 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=43.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH--HHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEec
Q 004825 221 WLVAYALNALGLDKGSAIAIDMPMNVNSVVIYL--AIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 221 ~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~l--A~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 290 (728)
..+...|... +++||.|.+ .+.+......++ .+.+.|+.+..+|.....+.++..++. +.++|+...
T Consensus 87 aAi~~al~al-l~~GD~VI~-~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~ 155 (432)
T PRK06702 87 AAIMLAVLNI-CSSGDHLLC-SSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAES 155 (432)
T ss_pred HHHHHHHHHh-cCCCCEEEE-CCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEc
Confidence 3344444444 689998765 344443333332 256789999899887777888888865 677777654
No 259
>PRK11761 cysM cysteine synthase B; Provisional
Probab=23.37 E-value=5.2e+02 Score=26.62 Aligned_cols=69 Identities=16% Similarity=0.190 Sum_probs=44.3
Q ss_pred HHHHHHHHHcC-CCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEec
Q 004825 221 WLVAYALNALG-LDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 221 ~~lA~~L~~~G-v~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 290 (728)
..+...+.+.| +++|+.|.... .+-.-...-+++.+.|.-++.+-|...+......++..+++++++..
T Consensus 48 ~~~~~~a~~~g~~~~g~~vv~aS-sGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 48 LSMIVQAEKRGEIKPGDTLIEAT-SGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred HHHHHHHHHcCCCCCCCEEEEeC-CChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 33344445556 47777765544 44444445556677887666665654445566778889999999985
No 260
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=23.28 E-value=9.5e+02 Score=25.80 Aligned_cols=59 Identities=15% Similarity=0.139 Sum_probs=30.5
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCc-EEEecCCCCCHHHHHHHHHhcCceEEEEecce
Q 004825 232 LDKGSAIAIDMPMNVNSVVIYLAIVLAGY-IVVSIADSFASLEISARLRISKAKAIFTQDLI 292 (728)
Q Consensus 232 v~~gd~Vai~~~~s~~~vva~lA~lkaG~-~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~ 292 (728)
+++||.|.+..+.-....-.+....+.|+ ....++ ....+.+...++. +.++|+.....
T Consensus 88 ~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-~~d~e~l~~~l~~-~tklV~l~sP~ 147 (386)
T PRK08045 88 LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-QGDEQALRAALAE-KPKLVLVESPS 147 (386)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-CCCHHHHHHhccc-CCeEEEEECCC
Confidence 46778777665543333333333444454 333343 2345666666643 56777665443
No 261
>PRK12582 acyl-CoA synthetase; Provisional
Probab=23.15 E-value=3.1e+02 Score=31.63 Aligned_cols=79 Identities=10% Similarity=0.003 Sum_probs=54.8
Q ss_pred EEecCcHHHHHHH---HHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCC-----cchHHHHHHHhC
Q 004825 374 IPWTNATPFKAAA---DAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPL-----GSGFAKFVQDAK 445 (728)
Q Consensus 374 V~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~-----~~~l~~~i~~~~ 445 (728)
-.+|.+.+...+. ......++.++|+++...+-+... +..+|+.+..|+..+.++.... ..++...+++.+
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEH-ALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVK 157 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH-HHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcC
Confidence 4577776654443 333456899999998888755443 3456789999999888764332 257888888888
Q ss_pred CcEEEecH
Q 004825 446 VTMLGVVP 453 (728)
Q Consensus 446 vt~l~~~P 453 (728)
+..++...
T Consensus 158 ~~~vi~~~ 165 (624)
T PRK12582 158 PRVVFAQS 165 (624)
T ss_pred CcEEEecC
Confidence 88877653
No 262
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=22.82 E-value=9e+02 Score=25.40 Aligned_cols=76 Identities=11% Similarity=-0.001 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEE-EEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEec
Q 004825 213 LKELRAEVWLVAYALNALGLDKGSAIA-IDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQD 290 (728)
Q Consensus 213 Y~eL~~~a~~lA~~L~~~Gv~~gd~Va-i~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 290 (728)
|.+..+++.+..+.|. |..++..+. +...-+..+..++.++...|...+..++.+...++....+..+++++....
T Consensus 35 ~~~~~~~~~~~l~~l~--~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~ 111 (368)
T PRK13479 35 FNALTASVRAKLVAIA--TGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDT 111 (368)
T ss_pred HHHHHHHHHHHHHHHh--CCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEEC
Confidence 5555555544433333 555554444 444445667777777777776555555666555666777777887776543
No 263
>PRK05852 acyl-CoA synthetase; Validated
Probab=22.63 E-value=3.3e+02 Score=30.59 Aligned_cols=76 Identities=9% Similarity=-0.087 Sum_probs=55.7
Q ss_pred EecCcHHHH---HHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFK---AAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|...+.. .+.......++.++|++....+-+... +..+++.+..|+..+..+.......+...|+..++..++.
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 43 AISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEF-VVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHH-HHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEE
Confidence 456665543 333334557899999998877665543 3456789999999998887777778999999999998874
No 264
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=22.54 E-value=7.6e+02 Score=30.87 Aligned_cols=100 Identities=15% Similarity=0.140 Sum_probs=69.9
Q ss_pred CCCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCcEEEe
Q 004825 189 RSLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMN--VNSVVIYLAIVLAGYIVVS 264 (728)
Q Consensus 189 ~~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s--~~~vva~lA~lkaG~~~vp 264 (728)
..+|.+|.+.-..| .+|. .-.+|++.+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+..+.
T Consensus 779 ~~~~~~a~i~~TSG-TTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~ 854 (1146)
T PRK08633 779 FKPDDTATIIFSSG-SEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVY 854 (1146)
T ss_pred CCCCCEEEEEECCC-CCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEE
Confidence 35678888765543 2333 346788887766554433 34788899887777643 3334446777888988887
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEecce
Q 004825 265 IADSFASLEISARLRISKAKAIFTQDLI 292 (728)
Q Consensus 265 l~p~~~~~~l~~~l~~~~~~~il~~~~~ 292 (728)
.......+.+...+++.++..+.+....
T Consensus 855 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~ 882 (1146)
T PRK08633 855 HPDPTDALGIAKLVAKHRATILLGTPTF 882 (1146)
T ss_pred eCCCCCHHHHHHHHHHcCCeEEEecHHH
Confidence 7666778889999999999999887643
No 265
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=22.51 E-value=4.6e+02 Score=26.67 Aligned_cols=98 Identities=18% Similarity=0.208 Sum_probs=59.2
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCC----CHHHHHHHHHhcCceE
Q 004825 210 SMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSF----ASLEISARLRISKAKA 285 (728)
Q Consensus 210 ~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~----~~~~l~~~l~~~~~~~ 285 (728)
.+-.+-+ -|+-.||..|++.| -.|.+++.+....... .+.+.|..+..++-.. ..+++...+++.++++
T Consensus 11 ~iG~GHv-~Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~ 83 (279)
T TIGR03590 11 EIGLGHV-MRCLTLARALHAQG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDI 83 (279)
T ss_pred cccccHH-HHHHHHHHHHHHCC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCE
Confidence 4444444 36788999998764 3566666655444333 3457888777774322 2446888999999999
Q ss_pred EEEecceecCCcccchHhhHhhcCCcEEEEcCC
Q 004825 286 IFTQDLIIRGDKSIPLYRVIDAQAPLAIVIPAK 318 (728)
Q Consensus 286 il~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 318 (728)
+|+|.-... .............+++++..
T Consensus 84 vV~D~y~~~----~~~~~~~k~~~~~l~~iDD~ 112 (279)
T TIGR03590 84 LIVDHYGLD----ADWEKLIKEFGRKILVIDDL 112 (279)
T ss_pred EEEcCCCCC----HHHHHHHHHhCCeEEEEecC
Confidence 999874210 11123333344566666653
No 266
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=22.23 E-value=2.8e+02 Score=30.73 Aligned_cols=78 Identities=6% Similarity=-0.062 Sum_probs=56.4
Q ss_pred EecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+...+... ....++.+++++....+-+.. .+..+|+.+..|+..+..+.......+..+++..++..++.
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~-~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPE-MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIA 105 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEe
Confidence 46777665544333 345678889999888776655 34557789999998887776556677888899988888876
Q ss_pred cH
Q 004825 452 VP 453 (728)
Q Consensus 452 ~P 453 (728)
..
T Consensus 106 ~~ 107 (503)
T PRK04813 106 TE 107 (503)
T ss_pred cc
Confidence 54
No 267
>PRK06060 acyl-CoA synthetase; Validated
Probab=22.17 E-value=3.5e+02 Score=31.78 Aligned_cols=93 Identities=12% Similarity=-0.027 Sum_probs=64.4
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHH---HHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAA---ADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.|+.+|++ + + . .+|.+.+...+ .......++.++|++..+.+-+...- ..+++.+..|+..+..+.
T Consensus 19 ~pd~~a~~-~--~-----~--~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~-~~~la~~~aG~~~vpi~p 87 (705)
T PRK06060 19 WYDRPAFY-A--A-----D--VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLV-QLLLACLARGVMAFLANP 87 (705)
T ss_pred CCCceEEE-e--c-----C--ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCcEEEecCC
Confidence 45777764 2 2 1 36777664433 33344578999999998887776653 346688999998888776
Q ss_pred CCCcchHHHHHHHhCCcEEEecHHHHH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVPSIVR 457 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps~l~ 457 (728)
.....++...+++.++.++........
T Consensus 88 ~~~~~~l~~~l~~~~~~~vi~~~~~~~ 114 (705)
T PRK06060 88 ELHRDDHALAARNTEPALVVTSDALRD 114 (705)
T ss_pred CCCHHHHHHHHhcCCCcEEEEchHHhh
Confidence 655667888888889888877655443
No 268
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=22.15 E-value=9.2e+02 Score=25.25 Aligned_cols=67 Identities=12% Similarity=0.147 Sum_probs=40.4
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEec--CCC--CCHHHHHHHHHhcCceEEEEecceecCCcccch
Q 004825 232 LDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSI--ADS--FASLEISARLRISKAKAIFTQDLIIRGDKSIPL 301 (728)
Q Consensus 232 v~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl--~p~--~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~ 301 (728)
+++||.|.+..|.-. . ...++...|+..+++ +.+ ...+.+...+...++++|+.....-..+...+.
T Consensus 97 ~~~gd~Vlv~~p~y~-~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~ 167 (351)
T PRK14807 97 INKGDVVIYPHPSFA-M--YSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIER 167 (351)
T ss_pred cCCCCEEEEeCCChH-H--HHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence 568999988765422 2 233445567665555 432 456777777766678888766544444555544
No 269
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=22.08 E-value=5.9e+02 Score=26.15 Aligned_cols=65 Identities=22% Similarity=0.258 Sum_probs=42.2
Q ss_pred HHHHcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCceEEEEecc
Q 004825 226 ALNALGL-DKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIADSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 226 ~L~~~Gv-~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
.+.+.|. .+|+.|. ....+-.-...-+++.+.|.-++.+-|...++.....++..+++++++...
T Consensus 48 ~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 48 DAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3445564 7787764 444454444555566678877766666554445556788999999998753
No 270
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=21.99 E-value=8.1e+02 Score=24.54 Aligned_cols=70 Identities=9% Similarity=0.115 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcC-CCCCCEEEEEcCCCHHHHHHHHHHHHc------C--cEEEecCCCC---CHHHHHHHHHhcCceEEE
Q 004825 220 VWLVAYALNALG-LDKGSAIAIDMPMNVNSVVIYLAIVLA------G--YIVVSIADSF---ASLEISARLRISKAKAIF 287 (728)
Q Consensus 220 a~~lA~~L~~~G-v~~gd~Vai~~~~s~~~vva~lA~lka------G--~~~vpl~p~~---~~~~l~~~l~~~~~~~il 287 (728)
.+++.+.+.+.+ +.+|++|+|.+.-+.+.++.+..+... | ...+-+|.+. ..+.+..+.+..+..+.+
T Consensus 13 ~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v 92 (258)
T PRK10696 13 RRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHI 92 (258)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEE
Confidence 345566677654 578999999999999998766555332 2 3455566543 445567777888887776
Q ss_pred Ee
Q 004825 288 TQ 289 (728)
Q Consensus 288 ~~ 289 (728)
..
T Consensus 93 ~~ 94 (258)
T PRK10696 93 EE 94 (258)
T ss_pred EE
Confidence 65
No 271
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=21.67 E-value=1.5e+02 Score=30.40 Aligned_cols=53 Identities=15% Similarity=0.074 Sum_probs=41.8
Q ss_pred eeecHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcE
Q 004825 209 KSMTLKELRA-----EVWLVAYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYI 261 (728)
Q Consensus 209 ~~lTY~eL~~-----~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~ 261 (728)
..+.|.++.. ....+...|.+.|+.+++.|.++|.++...-.+.+++-.+|.-
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 3566777653 2456777788889999999999999999888888888888864
No 272
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=21.48 E-value=7.3e+02 Score=27.80 Aligned_cols=97 Identities=13% Similarity=0.015 Sum_probs=66.8
Q ss_pred CCCCeEEEEeccCCCCCC--ceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH---HHHHHHHHcCcEEEe
Q 004825 190 SLDDIVIRWCDEGDGGLP--VKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSV---VIYLAIVLAGYIVVS 264 (728)
Q Consensus 190 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~v---va~lA~lkaG~~~vp 264 (728)
.++.+|.+.-..| .+|. .-.+|.+.+...+..... ..++.++|++..++|-+..+- ..+++++..|+..+.
T Consensus 180 ~~~~~a~i~~TSG-TTG~PKgV~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~ 255 (536)
T PRK10946 180 PADEVAFFQLSGG-STGTPKLIPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVL 255 (536)
T ss_pred CCCCeEEEEeCCC-CCCCCcEEEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEE
Confidence 5677777655433 2333 356888888776665443 457889999988887654322 257888899998876
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEecc
Q 004825 265 IADSFASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 265 l~p~~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
. +..........+++.++.++.....
T Consensus 256 ~-~~~~~~~~~~~l~~~~~t~~~~~p~ 281 (536)
T PRK10946 256 A-PDPSATLCFPLIEKHQVNVTALVPP 281 (536)
T ss_pred C-CCCCHHHHHHHHHHhCCcEEEeChH
Confidence 5 4456677788899999988877653
No 273
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=21.42 E-value=7.5e+02 Score=25.52 Aligned_cols=72 Identities=13% Similarity=0.024 Sum_probs=50.1
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH----------------------------HHHHHHHHHHcCcEE
Q 004825 211 MTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVN----------------------------SVVIYLAIVLAGYIV 262 (728)
Q Consensus 211 lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~----------------------------~vva~lA~lkaG~~~ 262 (728)
-....+.+....+...+++.|+. ..|.|.+-++-. ..+...|++++|+.|
T Consensus 126 ~~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~f 203 (295)
T PF07994_consen 126 SKREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPF 203 (295)
T ss_dssp THHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEE
T ss_pred chHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCe
Confidence 44556667778899999998773 466665544322 445567888999999
Q ss_pred EecCCCCCH--HHHHHHHHhcCce
Q 004825 263 VSIADSFAS--LEISARLRISKAK 284 (728)
Q Consensus 263 vpl~p~~~~--~~l~~~l~~~~~~ 284 (728)
+..-|.... ..+..+.++.+.-
T Consensus 204 vN~tP~~~a~~P~l~ela~~~gvp 227 (295)
T PF07994_consen 204 VNGTPSNIADDPALVELAEEKGVP 227 (295)
T ss_dssp EE-SSSTTTTSHHHHHHHHHHTEE
T ss_pred EeccCccccCCHHHHHHHHHcCCC
Confidence 999987765 6788888887765
No 274
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=21.13 E-value=2.8e+02 Score=30.70 Aligned_cols=79 Identities=9% Similarity=-0.065 Sum_probs=57.5
Q ss_pred EecCcHHHHHHHHH---HHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchHHHHHHHhCCcEEEe
Q 004825 375 PWTNATPFKAAADA---WCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKVTMLGV 451 (728)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~ 451 (728)
.+|.+.+...+... ....++.+++++....+-+.... ..+++.+..|+..+..+.......+...+++.++..+..
T Consensus 25 ~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~-~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 103 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHML-VAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIH 103 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHH-HHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEe
Confidence 57777665444333 33457888999888777666553 446799999998888776666677889999999998887
Q ss_pred cHH
Q 004825 452 VPS 454 (728)
Q Consensus 452 ~Ps 454 (728)
...
T Consensus 104 ~~~ 106 (502)
T TIGR01734 104 TAE 106 (502)
T ss_pred ccc
Confidence 654
No 275
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=20.99 E-value=2.2e+02 Score=24.53 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=27.1
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH
Q 004825 210 SMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNV 246 (728)
Q Consensus 210 ~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~ 246 (728)
-++|.++.+.++.+|..|.+.+..... .+..+++-
T Consensus 4 ~~~~~~~~~~~~~la~~i~~~~~~~~~--ivgi~~~G 38 (125)
T PF00156_consen 4 ILSPEQIEALAERLAEQIKESGFDFDV--IVGIPRGG 38 (125)
T ss_dssp EEBHHHHHHHHHHHHHHHHHHTTTSSE--EEEETTTT
T ss_pred EEcHHHHHHHHHHHHHHHHHhCCCCCE--EEeehhcc
Confidence 589999999999999999998776544 44444443
No 276
>PRK10595 SOS cell division inhibitor; Provisional
Probab=20.65 E-value=3.7e+02 Score=25.02 Aligned_cols=66 Identities=12% Similarity=0.090 Sum_probs=44.7
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEecC--C-CCCHH---HHHHHHHhcCceEEEEe
Q 004825 224 AYALNALGLDKGSAIAIDMPMNVNSVVIYLAIVLAGYIVVSIA--D-SFASL---EISARLRISKAKAIFTQ 289 (728)
Q Consensus 224 A~~L~~~Gv~~gd~Vai~~~~s~~~vva~lA~lkaG~~~vpl~--p-~~~~~---~l~~~l~~~~~~~il~~ 289 (728)
+.+|.+.|+..+..+.|...+..+.+-++-=+++.|..-+.|- | ....+ ||...-+..++-.++.-
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~R 141 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIMR 141 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEEe
Confidence 5788899998887777777788899999999999996444332 4 55444 34444445555444443
No 277
>PRK13390 acyl-CoA synthetase; Provisional
Probab=20.56 E-value=4.1e+02 Score=29.45 Aligned_cols=93 Identities=17% Similarity=0.108 Sum_probs=64.6
Q ss_pred CCCCceEEEecCCCCCCCceEEecCcHHHHHHHH---HHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCC
Q 004825 354 PVEAFTNILFSSGTTGEPKAIPWTNATPFKAAAD---AWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNG 430 (728)
Q Consensus 354 ~~~~~a~iiyTSGSTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (728)
.|+.+|++... +| ..+|.+.+...+.. .....++.++|++....+-+.+. +..+++.+..|+..+..+.
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~-~~~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEA-LVVLWAALRSGLYITAINH 81 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEecccc
Confidence 45666654421 22 35777766544433 33456899999998887776654 3456789999999888877
Q ss_pred CCCcchHHHHHHHhCCcEEEecHH
Q 004825 431 SPLGSGFAKFVQDAKVTMLGVVPS 454 (728)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps 454 (728)
...+.++...+++.++..+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~ 105 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAA 105 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcch
Confidence 666678888899888888876554
No 278
>PRK07868 acyl-CoA synthetase; Validated
Probab=20.42 E-value=8.3e+02 Score=30.20 Aligned_cols=97 Identities=14% Similarity=0.120 Sum_probs=58.2
Q ss_pred CCCeEEEEeccCCCCCCceeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCcEEEecCCC
Q 004825 191 LDDIVIRWCDEGDGGLPVKSMTLKELRAEVWLVAYALNALGLDKGSAIAIDMPMNVNSV--VIYLAIVLAGYIVVSIADS 268 (728)
Q Consensus 191 pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~~~v--va~lA~lkaG~~~vpl~p~ 268 (728)
++.+|++.-.+.+..+....+|.......+. ......++.++|++...+|=+..+- ..+++.+..|+. +.+.+.
T Consensus 605 ~dd~a~IiyTgStgtpKpk~vt~~~~~~~~~---~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~-vvl~~~ 680 (994)
T PRK07868 605 ARDLAFIAFSTAGGELVAKQITNYRWALSAF---GTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSR-IALSRG 680 (994)
T ss_pred CCccEEEEEeCCCCCcCcEEEehHHHHHHHH---hhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceE-EEecCC
Confidence 4666765543222334444566433221111 1112347889999998888665433 234455554544 555567
Q ss_pred CCHHHHHHHHHhcCceEEEEecc
Q 004825 269 FASLEISARLRISKAKAIFTQDL 291 (728)
Q Consensus 269 ~~~~~l~~~l~~~~~~~il~~~~ 291 (728)
+.++++...+++.++.++.....
T Consensus 681 ~~~~~~~~~I~~~~vT~~~~~Ps 703 (994)
T PRK07868 681 LDPDRFVQEVRQYGVTVVSYTWA 703 (994)
T ss_pred CCHHHHHHHHHHhCCcEEEeHHH
Confidence 88999999999999998877653
No 279
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=20.33 E-value=6.7e+02 Score=22.94 Aligned_cols=112 Identities=13% Similarity=-0.020 Sum_probs=70.4
Q ss_pred eEEecCcHHHHHHHHHHHhcCCCCCCEEEecCCcchhhhHHHHHHHhhhCcEEEEeCCCCCcchH---HHHHHHhCCcEE
Q 004825 373 AIPWTNATPFKAAADAWCHMDIRKADIVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGF---AKFVQDAKVTML 449 (728)
Q Consensus 373 gV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l---~~~i~~~~vt~l 449 (728)
-.++.+.++...+... +...+..+.+++=....+...++.-|...++-+.+.+.+|++.+ .+++++++-+.+
T Consensus 21 V~VvENp~Vf~~~~~~-----~~~~~~pLVCt~G~p~~A~~~LL~~L~~~g~~l~y~GDfDp~Gl~IA~~l~~r~~~~~W 95 (152)
T PF09664_consen 21 VYVVENPAVFSALADE-----LGASCPPLVCTSGQPSAAARRLLDRLAAAGARLYYSGDFDPEGLRIANRLIQRYGARPW 95 (152)
T ss_pred EEEEecHHHHHHHHHh-----cCCCCCeEEEcCCcHHHHHHHHHHHHHhCCCEEEEecCCCHHHHHHHHHHHHHhCCccc
Confidence 5678888887776543 22344444444433444445666777666666677788888754 356788898889
Q ss_pred EecHHHHHHHHcCCCCCCCCCcCeeEEEeecCCCCHHHHHHHHhc
Q 004825 450 GVVPSIVRTWKSTNCIDGYDWSSIRCFGSTGEASNVDEYLWLMGR 494 (728)
Q Consensus 450 ~~~Ps~l~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~ 494 (728)
.+.+.-+.............+. +..+ .+..+++...+.+.
T Consensus 96 rm~~~dY~~~~~~~~~~~~~l~-l~~v----~p~~~~L~~~m~~~ 135 (152)
T PF09664_consen 96 RMDAEDYLAALSAEPLSGRRLK-LPNV----APWLPELAEAMRER 135 (152)
T ss_pred cCCHHHHHHhccccCCCCCcCC-cccC----ChhcHHHHHHHHHh
Confidence 9999988766655443333333 3322 56667777777654
Done!