BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004835
(728 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 25/165 (15%)
Query: 543 GKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNI 600
++++ P AGT GFRAPEVL + +Q +D+WSAGV L L+ GR PF+ D +
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTAL 257
Query: 601 KDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLI----TKRPDFLEV 656
I +RGS + + AK +F + + +K +P +L + C+ + + P
Sbjct: 258 AQIMTIRGSRETIQAAK------TFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSD 311
Query: 657 I-------------PSSLFDLVDKCLTVNPRLRISAEDALKHEFF 688
I P +DL+DK L +NP RI+AE+AL H FF
Sbjct: 312 IQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFF 356
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 203 FIVEEEEGSGGYGTVYRARRK-NDGTVVAIKCPHANASKH--YVSNELRMLERFGGKNFI 259
F +E++ G G + +VY A + G I H + H ++ EL+ L GG++ +
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNV 82
Query: 260 IKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRD 319
+ + CF+ D + +++H+ + + +++ Y LF+AL +H+ GIVHRD
Sbjct: 83 MGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRD 142
Query: 320 VKPGNFLFSCKAVKGYLIDFNLA 342
VKP NFL++ + K L+DF LA
Sbjct: 143 VKPSNFLYNRRLKKYALVDFGLA 165
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V EHV D LKK +D S L + Y + L +
Sbjct: 64 HPN-IVKLLDVIHTENKLYLVFEHVDQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 153
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSED- 611
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 612 -LWE-VAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFD---LVD 666
+W V + + + SF P+W R DF +V+P D L+
Sbjct: 229 VVWPGVTSMPDYKPSF---------------PKWA-----RQDFSKVVPPLDEDGRSLLS 268
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
+ L +P RISA+ AL H FF
Sbjct: 269 QMLHYDPNKRISAKAALAHPFF 290
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 1 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 52
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 53 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHY 112
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 173 LVRGEPNVSXICSRYYRAP 191
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 245 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 290
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 291 PTARLTPLEACAHSFF 306
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGK 256
E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALASLHK 312
N I+K + V EHV D + I L ++ Y + L + LA H
Sbjct: 62 N-IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 313 QGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
++HRD+KP N L + + A+K L DF LA
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIK--LADFGLA 149
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 223
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 224 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 265
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 266 MLHYDPNKRISAKAALAHPFF 286
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIK-----CPHANASKHYVSNELRMLERFGGKNFIIKY 262
E G G +G VY AR + VVAIK +N + E+R L++ N I+Y
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN-TIQY 119
Query: 263 EGCFKCGDSDCFVLEHV---KHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRD 319
GC+ + V+E+ D EV KK + ++ + + LA LH ++HRD
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 179
Query: 320 VKPGNFLFS 328
VK GN L S
Sbjct: 180 VKAGNILLS 188
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 44/139 (31%)
Query: 552 AGTKGFRAPEVLF---RSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRG 608
GT + APEV+ Q+ G K+D+WS G+T + L + P F +
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPLF-----------NMNA 258
Query: 609 SEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
L+ +A+ ES P + W + + VD C
Sbjct: 259 MSALYHIAQ---NES------------PALQSGHWSEYFR--------------NFVDSC 289
Query: 669 LTVNPRLRISAEDALKHEF 687
L P+ R ++E LKH F
Sbjct: 290 LQKIPQDRPTSEVLLKHRF 308
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 19/200 (9%)
Query: 175 ISRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP 234
+S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 1 LSKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-- 52
Query: 235 HANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------ 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 53 KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH 112
Query: 288 ----KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAM 343
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 113 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 172
Query: 344 VGFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 173 QLVRGEPNVSXICSRYYRAP 192
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 245
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 246 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 291
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 292 PTARLTPLEACAHSFF 307
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF---GDPEQ--NIKDIAKLRG 608
T +RAPEVL +S + P +D+WS G + M R P F D +Q I D+ L G
Sbjct: 182 TLWYRAPEVLLQSSYATP-VDLWSVG-CIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 609 SEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
ED W R+ + P + +KS PI K +T + + DL+ KC
Sbjct: 240 EED-WP------RDVALPRQAFHSKSAQPIE-----KFVTDIDELGK-------DLLLKC 280
Query: 669 LTVNPRLRISAEDALKHEFF 688
LT NP RISA AL H +F
Sbjct: 281 LTFNPAKRISAYSALSHPYF 300
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 65/154 (42%), Gaps = 19/154 (12%)
Query: 208 EEGSGGYGTVYRARR-KNDGTVVAIKCPHANASKHYVSNE-------LRMLERFGGKNFI 259
E G G YG V++AR KN G VA+K + + LR LE F N +
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 260 IKYEGCFKCGDSD-----CFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALASL 310
++ C +D V EHV D L K + ++ + L R L L
Sbjct: 78 RLFDVC-TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
H +VHRD+KP N L + + L DF LA +
Sbjct: 137 HSHRVVHRDLKPQNILVTSSG-QIKLADFGLARI 169
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF---GDPEQ--NIKDIAKLRG 608
T +RAPEVL +S + P +D+WS G + M R P F D +Q I D+ L G
Sbjct: 182 TLWYRAPEVLLQSSYATP-VDLWSVG-CIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 609 SEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
ED W R+ + P + +KS PI K +T + + DL+ KC
Sbjct: 240 EED-WP------RDVALPRQAFHSKSAQPIE-----KFVTDIDELGK-------DLLLKC 280
Query: 669 LTVNPRLRISAEDALKHEFF 688
LT NP RISA AL H +F
Sbjct: 281 LTFNPAKRISAYSALSHPYF 300
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 65/154 (42%), Gaps = 19/154 (12%)
Query: 208 EEGSGGYGTVYRARR-KNDGTVVAIKCPHANASKHYV-------SNELRMLERFGGKNFI 259
E G G YG V++AR KN G VA+K + + LR LE F N +
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 260 IKYEGCFKCGDSD-----CFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALASL 310
++ C +D V EHV D L K + ++ + L R L L
Sbjct: 78 RLFDVC-TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
H +VHRD+KP N L + + L DF LA +
Sbjct: 137 HSHRVVHRDLKPQNILVTSSG-QIKLADFGLARI 169
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF---GDPEQ--NIKDIAKLRG 608
T +RAPEVL +S + P +D+WS G + M R P F D +Q I D+ L G
Sbjct: 182 TLWYRAPEVLLQSSYATP-VDLWSVG-CIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 609 SEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
ED W R+ + P + +KS PI K +T + + DL+ KC
Sbjct: 240 EED-WP------RDVALPRQAFHSKSAQPIE-----KFVTDIDELGK-------DLLLKC 280
Query: 669 LTVNPRLRISAEDALKHEFF 688
LT NP RISA AL H +F
Sbjct: 281 LTFNPAKRISAYSALSHPYF 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 65/154 (42%), Gaps = 19/154 (12%)
Query: 208 EEGSGGYGTVYRARR-KNDGTVVAIKCPHANASKHYV-------SNELRMLERFGGKNFI 259
E G G YG V++AR KN G VA+K + + LR LE F N +
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 260 IKYEGCFKCGDSD-----CFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALASL 310
++ C +D V EHV D L K + ++ + L R L L
Sbjct: 78 RLFDVC-TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
H +VHRD+KP N L + + L DF LA +
Sbjct: 137 HSHRVVHRDLKPQNILVTSSG-QIKLADFGLARI 169
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSEDL 612
T+ +RAPEV+ H +DIWS G + ++ G+T F G D + I K+ G
Sbjct: 204 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGT 263
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSS---LFDLVDKCL 669
V KL+++ AAKS +LP+ T R DF ++ P + DL++K L
Sbjct: 264 EFVQKLNDK---------AAKSYIQ-SLPQ-----TPRKDFTQLFPRASPQAADLLEKML 308
Query: 670 TVNPRLRISAEDALKHEFFAP 690
++ R++A AL H FF P
Sbjct: 309 ELDVDKRLTAAQALTHPFFEP 329
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Query: 188 NDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK------CPHANASKH 241
D A LP ++++ GSG YG+V A K G VAIK A +
Sbjct: 31 QDVNKTAWELP--KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA 88
Query: 242 YVSNELRMLERFGGKNFIIKYEGCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQ 295
Y EL +L+ +N +I F S D + V+ ++ D +++ E +
Sbjct: 89 Y--RELLLLKHMQHEN-VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEK 145
Query: 296 LQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+Q+ Y + + L +H G+VHRD+KPGN L + + ++DF LA
Sbjct: 146 IQYLVYQMLKGLKYIHSAGVVHRDLKPGN-LAVNEDCELKILDFGLA 191
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIK-----CPHANASKHYVSNELRMLERFGGKNFIIKY 262
E G G +G VY AR + VVAIK +N + E+R L++ N I+Y
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN-TIQY 80
Query: 263 EGCFKCGDSDCFVLEHV---KHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRD 319
GC+ + V+E+ D EV KK + ++ + + LA LH ++HRD
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 140
Query: 320 VKPGNFLFS 328
VK GN L S
Sbjct: 141 VKAGNILLS 149
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 44/139 (31%)
Query: 552 AGTKGFRAPEVLF---RSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRG 608
GT + APEV+ Q+ G K+D+WS G+T + L + P F +
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPLFN-----------MNA 219
Query: 609 SEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
L+ +A+ ES P + W + + VD C
Sbjct: 220 MSALYHIAQ---NES------------PALQSGHWSEYFR--------------NFVDSC 250
Query: 669 LTVNPRLRISAEDALKHEF 687
L P+ R ++E LKH F
Sbjct: 251 LQKIPQDRPTSEVLLKHRF 269
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 20 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 71
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 72 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 131
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 132 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 191
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 192 LVRGEPNVSXICSRYYRAP 210
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 263
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 264 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 309
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 310 PTARLTPLEACAHSFF 325
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 9 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 60
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 61 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 120
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 121 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 180
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 181 LVRGEPNVSXICSRYYRAP 199
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 252
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 253 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 298
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 299 PTARLTPLEACAHSFF 314
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 19/200 (9%)
Query: 175 ISRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP 234
+S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 5 LSKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-- 56
Query: 235 HANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------ 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 57 KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH 116
Query: 288 ----KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAM 343
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 117 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 176
Query: 344 VGFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 177 QLVRGEPNVSYICSRYYRAP 196
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 190 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 249
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 250 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 295
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 296 PTARLTPLEACAHSFF 311
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 13 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 64
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 65 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 124
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 125 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 184
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 185 LVRGEPNVSXICSRYYRAP 203
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 256
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 257 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 302
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 303 PTARLTPLEACAHSFF 318
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 35 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 86
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 87 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 146
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 147 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 207 LVRGEPNVSXICSRYYRAP 225
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 278
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 279 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 324
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 325 PTARLTPLEACAHSFF 340
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSEDL 612
T+ +RAPEV+ H +DIWS G + ++ G+T F G D + I K+ G
Sbjct: 186 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGT 245
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSS---LFDLVDKCL 669
V KL+++ AAKS +LP+ T R DF ++ P + DL++K L
Sbjct: 246 EFVQKLNDK---------AAKSYIQ-SLPQ-----TPRKDFTQLFPRASPQAADLLEKML 290
Query: 670 TVNPRLRISAEDALKHEFFAP 690
++ R++A AL H FF P
Sbjct: 291 ELDVDKRLTAAQALTHPFFEP 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Query: 188 NDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK------CPHANASKH 241
D A LP ++++ GSG YG+V A K G VAIK A +
Sbjct: 13 QDVNKTAWELP--KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA 70
Query: 242 YVSNELRMLERFGGKNFIIKYEGCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQ 295
Y EL +L+ +N +I F S D + V+ ++ D +++ + +
Sbjct: 71 Y--RELLLLKHMQHEN-VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEK 127
Query: 296 LQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+Q+ Y + + L +H G+VHRD+KPGN L + + ++DF LA
Sbjct: 128 IQYLVYQMLKGLKYIHSAGVVHRDLKPGN-LAVNEDCELKILDFGLA 173
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 13 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 64
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 65 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 124
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 125 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 184
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 185 LVRGEPNVSXICSRYYRAP 203
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 256
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 257 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 302
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 303 PTARLTPLEACAHSFF 318
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 1 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 52
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 53 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 112
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 173 LVRGEPNVSXICSRYYRAP 191
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 245 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 290
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 291 PTARLTPLEACAHSFF 306
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 1 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 52
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 53 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 112
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 173 LVRGEPNVSXICSRYYRAP 191
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 245 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 290
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 291 PTARLTPLEACAHSFF 306
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 14 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 65
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 66 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 125
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 126 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 185
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 186 LVRGEPNVSYICSRYYRAP 204
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 257
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 258 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 303
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 304 PTARLTPLEACAHSFF 319
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 37 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 88
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 89 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 148
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 149 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 208
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 209 LVRGEPNVSYICSRYYRAP 227
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 280
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 281 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 326
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 327 PTARLTPLEACAHSFF 342
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 35 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 86
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 87 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 146
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 147 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 207 LVRGEPNVSYICSRYYRAP 225
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 278
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 279 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 324
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 325 PTARLTPLEACAHSFF 340
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 5 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 56
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 57 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 116
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 117 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 176
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 177 LVRGEPNVSXICSRYYRAP 195
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 248
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 249 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 294
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 295 PTARLTPLEACAHSFF 310
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 29 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 80
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 81 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 140
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 141 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 200
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 201 LVRGEPNVSYICSRYYRAP 219
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 213 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 272
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 273 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 318
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 319 PTARLTPLEACAHSFF 334
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 39 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 90
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 91 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 150
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 151 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 208
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 282
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 283 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 328
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 329 PTARLTPLEACAHSFF 344
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 80 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 131
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 132 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 191
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 192 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 249
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 264 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 323
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 324 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 369
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 370 PTARLTPLEACAHSFF 385
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 1 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 52
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 53 VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 112
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 173 LVRGEPNVSYICSRYYRAP 191
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 245 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 290
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 291 PTARLTPLEACAHSFF 306
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 16/140 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGS--E 610
T +RAP+VL S+ +DIWS G L ++ G+ F G + E+ +K I + G+ E
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNE 230
Query: 611 DLW-EVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
LW V KL P+ + PP +L + + TK P + +L D + L
Sbjct: 231 SLWPSVTKL-------PKYNPNIQQRPPRDLRQVLQPHTKEP-----LDGNLMDFLHGLL 278
Query: 670 TVNPRLRISAEDALKHEFFA 689
+NP +R+SA+ AL H +FA
Sbjct: 279 QLNPDMRLSAKQALHHPWFA 298
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYE 263
E+ G+G Y TVY+ K G VA+K ++ + S +R +++ +N + Y+
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 264 GCFKCGDSDCFVLEHVKHDRPEVLK--------KEIDLSQLQWYGYCLFRALASLHKQGI 315
+ V E + +D + + + ++L+ ++++ + L + LA H+ I
Sbjct: 71 -VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKI 129
Query: 316 VHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+HRD+KP N L + + + L DF LA
Sbjct: 130 LHRDLKPQNLLINKRG-QLKLGDFGLA 155
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 1 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 52
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 53 VLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 112
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 173 LVRGEPNVSYICSRYYRAP 191
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F + P I W K+ R P L + L
Sbjct: 245 EQIREMNPNYTEF--------AFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 290
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 291 PTARLTPLEACAHSFF 306
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLER 252
L + E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 253 FGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLF 304
N I+K + V E + D LKK +D S L + Y + L
Sbjct: 63 LNHPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 305 RALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
+ LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 154
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 228
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 229 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 270
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 271 MLHYDPNKRISAKAALAHPFF 291
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 1 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 52
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS-DCFVLEHVKHDRPEVL------- 287
K + + EL+++ + N + + G+ D L V PE +
Sbjct: 53 VLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 112
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 173 LVRGEPNVSYICSRYYRAP 191
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F P I W K+ R P L + L
Sbjct: 245 EQIREMNPNYTEF--------KFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 290
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 291 PTARLTPLEACAHSFF 306
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 41/177 (23%)
Query: 515 DLSDLQILLLTKLHPVPV-LIIFYLLLG-NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPK 572
DL +LL +KL V L F L + G+Q+ AGT G+ +PEVL R G
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL-RKDPYGKP 204
Query: 573 LDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAA 632
+D+W+ GV L L++G PF+ + + + K G+ D FP
Sbjct: 205 VDLWACGVILYILLVGYPPFWDEDQHRLYQQIK-AGAYD-------------FPS----- 245
Query: 633 KSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFA 689
PEW + + DL++K LT+NP RI+A +ALKH + +
Sbjct: 246 --------PEW-----------DTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 283
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCK----AVKGYLIDFNLAMVGFDGS----FNQAT 354
+ A+ H+ G+VHRD+KP N L + K AVK L DF LA + +G F A
Sbjct: 130 ILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVK--LADFGLA-IEVEGEQQAWFGFAG 186
Query: 355 LPGTKYVPPVNGRKVPSAK 373
PG Y+ P RK P K
Sbjct: 187 TPG--YLSPEVLRKDPYGK 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 21/159 (13%)
Query: 198 PNF-ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLER 252
P F E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 65
Query: 253 FGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLF 304
N I+K + V E + D LKK +D S L + Y + L
Sbjct: 66 LNHPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 305 RALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
+ LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 121 QGLAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 157
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSED- 611
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 612 -LWE-VAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFD---LVD 666
+W V + + + SF P+W R DF +V+P D L+
Sbjct: 233 VVWPGVTSMPDYKPSF---------------PKWA-----RQDFSKVVPPLDEDGRSLLS 272
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
+ L +P RISA+ AL H FF
Sbjct: 273 QMLHYDPNKRISAKAALAHPFF 294
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLER 252
L + E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 253 FGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLF 304
N I+K + V E + D LKK +D S L + Y + L
Sbjct: 62 LNHPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 305 RALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
+ LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 153
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSED- 611
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 612 -LWE-VAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFD---LVD 666
+W V + + + SF P+W R DF +V+P D L+
Sbjct: 229 VVWPGVTSMPDYKPSF---------------PKWA-----RQDFSKVVPPLDEDGRSLLS 268
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
+ L +P RISA+ AL H FF
Sbjct: 269 QMLHYDPNKRISAKAALAHPFF 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLER 252
L + E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 253 FGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLF 304
N I+K + V E + D LKK +D S L + Y + L
Sbjct: 63 LNHPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 305 RALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
+ LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 154
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 228
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 229 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 270
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 271 MLHYDPNKRISAKAALAHPFF 291
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 252 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 305
Query: 670 TVNPRLRISAEDALKHEFFAPC 691
+ + R++A +A++H +F P
Sbjct: 306 RYDHQSRLTAREAMEHPYFYPV 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 170 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 204
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 21/159 (13%)
Query: 198 PNF-ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLER 252
P F E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 65
Query: 253 FGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLF 304
N I+K + V E + D LKK +D S L + Y + L
Sbjct: 66 LNHPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 305 RALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
+ LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 121 QGLAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 157
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSED- 611
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 173 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 612 -LWE-VAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFD---LVD 666
+W V + + + SF P+W R DF +V+P D L+
Sbjct: 233 VVWPGVTSMPDYKPSF---------------PKWA-----RQDFSKVVPPLDEDGRSLLS 272
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
+ L +P RISA+ AL H FF
Sbjct: 273 QMLHYDPNKRISAKAALAHPFF 294
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ + H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFANV---------FIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLA 172
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGK 256
E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRALA 308
N I+K + V E + D LKK +D S L + Y + L + LA
Sbjct: 63 N-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 309 SLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 150
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 224
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 225 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 266
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 267 MLHYDPNKRISAKAALAHPFF 287
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 63 HPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 152
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSED- 611
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 612 -LWE-VAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFD---LVD 666
+W V + + + SF P+W R DF +V+P D L+
Sbjct: 228 VVWPGVTSMPDYKPSF---------------PKWA-----RQDFSKVVPPLDEDGRSLLS 267
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
+ L +P RISA+ AL H FF
Sbjct: 268 QMLHYDPNKRISAKAALAHPFF 289
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 39/147 (26%)
Query: 543 GKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKD 602
G+Q+ AGT G+ +PEVL R G +D+W+ GV L L++G PF+ + + +
Sbjct: 165 GEQQAWFGFAGTPGYLSPEVL-RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQ 223
Query: 603 IAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF 662
K G+ D FP PEW + +
Sbjct: 224 QIK-AGAYD-------------FPS-------------PEW-----------DTVTPEAK 245
Query: 663 DLVDKCLTVNPRLRISAEDALKHEFFA 689
DL++K LT+NP RI+A +ALKH + +
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWIS 272
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCK----AVKGYLIDFNLAMVGFDGS----FNQAT 354
+ A+ H+ G+VHR++KP N L + K AVK L DF LA + +G F A
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVK--LADFGLA-IEVEGEQQAWFGFAG 175
Query: 355 LPGTKYVPPVNGRKVPSAK 373
PG Y+ P RK P K
Sbjct: 176 TPG--YLSPEVLRKDPYGK 192
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 63 HPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 152
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSED- 611
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 612 -LWE-VAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFD---LVD 666
+W V + + + SF P+W R DF +V+P D L+
Sbjct: 228 VVWPGVTSMPDYKPSF---------------PKWA-----RQDFSKVVPPLDEDGRSLLS 267
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
+ L +P RISA+ AL H FF
Sbjct: 268 QMLHYDPNKRISAKAALAHPFF 289
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 176 SRIMALKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPH 235
S++ + AT D+ P S+ + G+G +G VY+A+ + G +VAIK
Sbjct: 1 SKVTTVVATPGQGPDR------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--K 52
Query: 236 ANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSD-----CFVLEHVKHDRPEVL--- 287
K + + EL+++ + N + + G+ VL++V V
Sbjct: 53 VLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHY 112
Query: 288 ---KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
K+ + + ++ Y Y LFR+LA +H GI HRD+KP N L L DF A
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 345 GFDGSFNQATLPGTKYVPP 363
G N + + Y P
Sbjct: 173 LVRGEPNVSXICSRYYRAP 191
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGSEDL 612
++ +RAPE++F + +D+WSAG L L++G+ F GD + +I K+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ + F + P I W K+ R P L + L
Sbjct: 245 EQIREMNPNYTEF--------AFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYT 290
Query: 673 PRLRISAEDALKHEFF 688
P R++ +A H FF
Sbjct: 291 PTARLTPLEACAHSFF 306
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 61 HPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 150
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 224
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 225 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 266
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 267 MLHYDPNKRISAKAALAHPFF 287
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLER 252
L + E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 253 FGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLF 304
N I+K + V E + D LKK +D S L + Y + L
Sbjct: 62 LNHPN-IVKLLDVIHTENKLYLVFEFLSMD----LKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 305 RALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
+ LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 117 QGLAFCHSHRVLHRDLKPENLLINTEGAIK--LADFGLA 153
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSED- 611
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 612 -LWE-VAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFD---LVD 666
+W V + + + SF P+W R DF +V+P D L+
Sbjct: 229 VVWPGVTSMPDYKPSF---------------PKWA-----RQDFSKVVPPLDEDGRSLLS 268
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
+ L +P RISA+ AL H FF
Sbjct: 269 QMLHYDPNKRISAKAALAHPFF 290
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 61 HPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 150
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 224
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 225 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 266
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 267 MLHYDPNKRISAKAALAHPFF 287
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 64 HPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 153
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 227
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 228 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 269
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 270 MLHYDPNKRISAKAALAHPFF 290
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 61 HPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 150
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 224
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 225 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 266
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 267 MLHYDPNKRISAKAALAHPFF 287
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 HMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 62 HPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 151
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 225
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 226 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 267
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 268 MLHYDPNKRISAKAALAHPFF 288
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 60/141 (42%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + + R +SLP W KL K S DL+D+
Sbjct: 268 SQEDLNCIINMKARNY--------LQSLPSKTKVAWAKLFPKS-------DSKALDLLDR 312
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI+ E+AL H +
Sbjct: 313 MLTFNPNKRITVEEALAHPYL 333
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 9/144 (6%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFI----IKY 262
G G YG V A T VAIK + Y LR +L RF +N I I
Sbjct: 52 GEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILR 111
Query: 263 EGCFKCGDSDCFVLEHVKHDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIVHRDVK 321
+ V + ++ D ++LK +++ + ++ Y + R L +H ++HRD+K
Sbjct: 112 ASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLK 171
Query: 322 PGNFLFSCKAVKGYLIDFNLAMVG 345
P N L + + DF LA +
Sbjct: 172 PSNLLINT-TCDLKICDFGLARIA 194
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLER 252
L + E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 253 FGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALA 308
N I+K + V E + D + + I L ++ Y + L + LA
Sbjct: 62 LNHPN-IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 309 SLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 153
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSED- 611
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 612 -LWE-VAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFD---LVD 666
+W V + + + SF P+W R DF +V+P D L+
Sbjct: 229 VVWPGVTSMPDYKPSF---------------PKWA-----RQDFSKVVPPLDEDGRSLLS 268
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
+ L +P RISA+ AL H FF
Sbjct: 269 QMLHYDPNKRISAKAALAHPFF 290
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 63 HPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 118 LAFCHSHRVLHRDLKPENLLINTEGAIK--LADFGLA 152
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSED- 611
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 612 -LWE-VAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFD---LVD 666
+W V + + + SF P+W R DF +V+P D L+
Sbjct: 228 VVWPGVTSMPDYKPSF---------------PKWA-----RQDFSKVVPPLDEDGRSLLS 267
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
+ L +P RISA+ AL H FF
Sbjct: 268 QMLHYDPNKRISAKAALAHPFF 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 62 HPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 151
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 225
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 226 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 267
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 268 MLHYDPNKRISAKAALAHPFF 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 62 HPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 151
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 225
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 226 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 267
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 268 MLHYDPNKRISAKAALAHPFF 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGK 256
E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRALA 308
N I+K + V E + D LKK +D S L + Y + L + LA
Sbjct: 63 N-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 309 SLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 150
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 224
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 225 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 266
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 267 MLHYDPNKRISAKAALAHPFF 287
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGK 256
E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRALA 308
N I+K + V E + D LKK +D S L + Y + L + LA
Sbjct: 62 N-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 309 SLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 149
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 223
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 224 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 265
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 266 MLHYDPNKRISAKAALAHPFF 286
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGK 256
E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRALA 308
N I+K + V E + D LKK +D S L + Y + L + LA
Sbjct: 62 N-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 309 SLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 149
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 223
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 224 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 265
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 266 MLHYDPNKRISAKAALAHPFF 286
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGK 256
E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRALA 308
N I+K + V E + D LKK +D S L + Y + L + LA
Sbjct: 62 N-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 309 SLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 149
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 223
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 224 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 265
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 266 MLHYDPNKRISAKAALAHPFF 286
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 62 HPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINTEGAIK--LADFGLA 151
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 225
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 226 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 267
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 268 MLHYDPNKRISAKAALAHPFF 288
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLER 252
L + E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 253 FGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALA 308
N I+K + V E + D + + I L ++ Y + L + LA
Sbjct: 61 LNHPN-IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 309 SLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 152
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 226
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 227 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 268
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 269 MLHYDPNKRISAKAALAHPFF 289
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGK 256
E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRALA 308
N I+K + V E + D LKK +D S L + Y + L + LA
Sbjct: 62 N-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 309 SLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 149
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 223
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 224 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 265
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 266 MLHYDPNKRISAKAALAHPFF 286
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 61 HPN-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 150
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 224
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 225 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 266
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 267 MLHYDPNKRISAKAALAHPFF 287
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG--DPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ R PFF D + IAK+ G+
Sbjct: 193 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT 252
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
E+L+ K ++ + D + L + W I L V P +L DL+DK L
Sbjct: 253 EELYGYLKKYHIDL----DPHFNDILGQHSRKRWENFIHSENRHL-VSPEAL-DLLDKLL 306
Query: 670 TVNPRLRISAEDALKHEFFAPC 691
+ + R++A++A++H +F P
Sbjct: 307 RYDHQQRLTAKEAMEHPYFYPV 328
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 250 LERFGGKNFIIKYEGCFK--CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRAL 307
LE G IIK K + V E++ + + L + + +++Y Y L +AL
Sbjct: 86 LENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELLKAL 145
Query: 308 ASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
H +GI+HRDVKP N + + K LID+ LA
Sbjct: 146 DYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA 180
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG--DPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ R PFF D + IAK+ G+
Sbjct: 198 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT 257
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
E+L+ K ++ + D + L + W I L V P +L DL+DK L
Sbjct: 258 EELYGYLKKYHIDL----DPHFNDILGQHSRKRWENFIHSENRHL-VSPEAL-DLLDKLL 311
Query: 670 TVNPRLRISAEDALKHEFFAPC 691
+ + R++A++A++H +F P
Sbjct: 312 RYDHQQRLTAKEAMEHPYFYPV 333
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 250 LERFGGKNFIIKYEGCFK--CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRAL 307
LE G IIK K + V E++ + + L + + +++Y Y L +AL
Sbjct: 91 LENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELLKAL 150
Query: 308 ASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
H +GI+HRDVKP N + + K LID+ LA
Sbjct: 151 DYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA 185
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGK 256
E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRALA 308
N I+K + V E + D LKK +D S L + Y + L + LA
Sbjct: 63 N-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 309 SLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 150
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 224
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 225 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 266
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 267 MLHYDPNKRISAKAALAHPFF 287
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRA 306
N I+K + V E + D LKK +D S L + Y + L +
Sbjct: 62 HPN-IVKLLDVIHTENKLYLVFEFLSMD----LKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 307 LASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
LA H ++HRD+KP N L + + A+K L DF LA
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINTEGAIK--LADFGLA 151
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 225
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 226 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 267
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 268 MLHYDPNKRISAKAALAHPFF 288
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALASL 310
N I+K + V E + D + + I L ++ Y + L + LA
Sbjct: 61 HPN-IVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 311 HKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIK--LADFGLA 150
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 224
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 225 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 266
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 267 MLHYDPNKRISAKAALAHPFF 287
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 254 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 301
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 302 LDSDKRITAAQALAHAYFAQYHD 324
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 42 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 98
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 158
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 159 HRDLKPSNLAVN-EDCELKILDFGLA 183
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLA 172
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 263 GA-ELLKKISSESA-RNYIQSLAQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 310
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 311 LDSDKRITAAQALAHAYFAQYHD 333
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 51 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 107
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 168 HRDLKPSNLAVN-EDCELKILDFGLA 192
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 255 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 302
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 303 LDSDKRITAAQALAHAYFAQYHD 325
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 43 GSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 99
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 160 HRDLKPSNLAVN-EDCELKILDFGLA 184
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 250 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 297
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 298 LDSDKRITAAQALAHAYFAQYHD 320
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 94
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 155 HRDLKPSNLAVN-EDCELKILDFGLA 179
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 255 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 302
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 303 LDSDKRITAAQALAHAYFAQYHD 325
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 43 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 99
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 160 HRDLKPSNLAVN-EDCELKILDFGLA 184
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 240
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 241 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 288
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 289 LDSDKRITAAQALAHAYFAQYHD 311
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 29 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 85
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 86 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 145
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 146 HRDLKPSNLAVN-EDCELKILDFGLA 170
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNF 325
HRD+KP N
Sbjct: 148 HRDLKPSNL 156
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 255 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 302
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 303 LDSDKRITAAQALAHAYFAQYHD 325
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 43 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 99
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 160 HRDLKPSNLAVN-EDCELKILDFGLA 184
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 254 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 301
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 302 LDSDKRITAAQALAHAYFAQYHD 324
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 42 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 98
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 158
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 159 HRDLKPSNLAVN-EDXELKILDFGLA 183
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 39/147 (26%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIK 601
G Q+ AGT G+ +PEVL R G +D+W+ GV L L++G PF+ + + +
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVL-RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLY 215
Query: 602 DIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSL 661
K G+ D FP PEW + +
Sbjct: 216 QQIK-AGAYD-------------FPS-------------PEW-----------DTVTPEA 237
Query: 662 FDLVDKCLTVNPRLRISAEDALKHEFF 688
DL++K LT+NP RI+A +ALKH +
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI 264
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 301 YCLFRALASL---HKQGIVHRDVKPGNFLFSCK----AVKGYLIDFNLAM-VGFD--GSF 350
+C+ + L S+ H GIVHRD+KP N L + K AVK L DF LA+ V D F
Sbjct: 107 HCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVK--LADFGLAIEVQGDQQAWF 164
Query: 351 NQATLPGTKYVPPVNGRKVPSAK 373
A PG Y+ P RK P K
Sbjct: 165 GFAGTPG--YLSPEVLRKDPYGK 185
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 250 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 297
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 298 LDSDKRITAAQALAHAYFAQYHD 320
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 94
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 155 HRDLKPSNLAVN-EDCELKILDFGLA 179
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 239 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 286
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 287 LDSDKRITAAQALAHAYFAQYHD 309
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK--------CPHANASKHYVSNELRMLERFGGKNFIIK 261
GSG YG+V A G VA+K HA + ELR+L+ +N +I
Sbjct: 27 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHEN-VIG 81
Query: 262 YEGCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQG 314
F S D +++ H+ D ++K +++ +Q+ Y + R L +H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
I+HRD+KP N + + + ++DF LA
Sbjct: 142 IIHRDLKPSNLAVN-EDCELKILDFGLA 168
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 263 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 310
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 311 LDSDKRITAAQALAHAYFAQYHD 333
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 51 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 107
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 168 HRDLKPSNLAVN-EDCELKILDFGLA 192
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 39/147 (26%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIK 601
G Q+ AGT G+ +PEVL R G +D+W+ GV L L++G PF+ + + +
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVL-RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLY 215
Query: 602 DIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSL 661
K G+ D FP PEW + +
Sbjct: 216 QQIK-AGAYD-------------FPS-------------PEW-----------DTVTPEA 237
Query: 662 FDLVDKCLTVNPRLRISAEDALKHEFF 688
DL++K LT+NP RI+A +ALKH +
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI 264
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 301 YCLFRALASL---HKQGIVHRDVKPGNFLFSCK----AVKGYLIDFNLAM-VGFD--GSF 350
+C+ + L S+ H GIVHRD+KP N L + K AVK L DF LA+ V D F
Sbjct: 107 HCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVK--LADFGLAIEVQGDQQAWF 164
Query: 351 NQATLPGTKYVPPVNGRKVPSAK 373
A PG Y+ P RK P K
Sbjct: 165 GFAGTPG--YLSPEVLRKDPYGK 185
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 249 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 296
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 297 LDSDKRITAAQALAHAYFAQYHD 319
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 37 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 93
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 154 HRDLKPSNLAVN-EDCELKILDFGLA 178
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 240 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 287
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 288 LDSDKRITAAQALAHAYFAQYHD 310
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 28 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 84
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 144
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 145 HRDLKPSNLAVN-EDCELKILDFGLA 169
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 262 GA-ELLKKISSESA-RNYIQSLAQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 309
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 310 LDSDKRITAAQALAHAYFAQYHD 332
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 50 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 106
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 166
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 167 HRDLKPSNLAVN-EDCELKILDFGLA 191
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 266 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 313
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 314 LDSDKRITAAQALAHAYFAQYHD 336
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 54 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 110
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 170
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 171 HRDLKPSNLAVN-EDCELKILDFGLA 195
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 262 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 309
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 310 LDSDKRITAAQALAHAYFAQYHD 332
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 50 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 106
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 166
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 167 HRDLKPSNLAVN-EDCELKILDFGLA 191
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLA 172
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLA 172
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNF 325
HRD+KP N
Sbjct: 148 HRDLKPSNL 156
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNF 325
HRD+KP N
Sbjct: 148 HRDLKPSNL 156
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 250 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 297
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 298 LDSDKRITAAQALAHAYFAQYHD 320
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 94
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 155 HRDLKPSNLAVN-EDCELKILDFGLA 179
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNF 325
HRD+KP N
Sbjct: 148 HRDLKPSNL 156
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 266 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 313
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 314 LDSDKRITAAQALAHAYFAQYHD 336
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 54 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 110
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 170
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 171 HRDLKPSNLAVN-EDCELKILDFGLA 195
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 248 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 295
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 296 LDSDKRITAAQALAHAYFAQYHD 318
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 36 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 92
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 153 HRDLKPSNLAVN-EDCELKILDFGLA 177
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 245 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 292
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 293 LDSDKRITAAQALAHAYFAQYHD 315
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 33 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 89
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 150 HRDLKPSNLAVN-EDCELKILDFGLA 174
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 245 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 292
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 293 LDSDKRITAAQALAHAYFAQYHD 315
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 33 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 89
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 150 HRDLKPSNLAVNEDS-ELKILDFGLA 174
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 249 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 296
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 297 LDSDKRITAAQALAHAYFAQYHD 319
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 37 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 93
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 154 HRDLKPSNLAVNEDS-ELKILDFGLA 178
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 239 GA-ELLKKISSESA-RNYIQSLAQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 286
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 287 LDSDKRITAAQALAHAYFAQYHD 309
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK--------CPHANASKHYVSNELRMLERFGGKNFIIK 261
GSG YG+V A G VA+K HA + ELR+L+ +N +I
Sbjct: 27 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHEN-VIG 81
Query: 262 YEGCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQG 314
F S D +++ H+ D ++K ++ +Q+ Y + R L +H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
I+HRD+KP N + + + ++DF LA
Sbjct: 142 IIHRDLKPSNLAVN-EDCELKILDFGLA 168
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLAQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLA 172
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 60/146 (41%), Gaps = 19/146 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 250 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNAD-------SKALDLLDK 294
Query: 668 CLTVNPRLRISAEDALKHEFFAPCHE 693
LT NP RI E AL H + A ++
Sbjct: 295 MLTFNPHKRIEVEQALAHPYLAQYYD 320
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRML--------ERFGGKNFIIK 261
G G YG V A + VAIK + Y LR + E G N II+
Sbjct: 34 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIR 93
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIVHRDV 320
+ D V + ++ D ++LK + + + ++ Y + R L +H ++HRD+
Sbjct: 94 APTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 152
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 153 KPSNLLLN-TTCDLKICDFGLARVA 176
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 239 GA-ELLKKISSESA-RNYIQSLAQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 286
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 287 LDSDKRITAAQALAHAYFAQYHD 309
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK--------CPHANASKHYVSNELRMLERFGGKNFIIK 261
GSG YG+V A G VA+K HA + ELR+L+ +N +I
Sbjct: 27 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHEN-VIG 81
Query: 262 YEGCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQG 314
F S D +++ H+ D ++K +++ +Q+ Y + R L +H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
I+HRD+KP N + + + ++DF LA
Sbjct: 142 IIHRDLKPSNLAVN-EDCELKILDFGLA 168
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 263 GA-ELLKKISSESA-RNYIQSLAQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 310
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 311 LDSDKRITAAQALAHAYFAQYHD 333
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 51 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 107
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 168 HRDLKPSNLAVN-EDCELKILDFGLA 192
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 240 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 287
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 288 LDSDKRITAAQALAHAYFAQYHD 310
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK--------CPHANASKHYVSNELRMLERFGGKNFIIK 261
GSG YG+V A G VA+K HA + ELR+L+ +N +I
Sbjct: 28 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHEN-VIG 82
Query: 262 YEGCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQG 314
F S D +++ H+ D ++K +++ +Q+ Y + R L +H
Sbjct: 83 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 142
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
I+HRD+KP N + + + ++DF LA
Sbjct: 143 IIHRDLKPSNLAVN-EDCELKILDFGLA 169
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLA 172
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 245 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 292
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 293 LDSDKRITAAQALAHAYFAQYHD 315
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 33 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 89
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 150 HRDLKPSNLAVN-EDCELKILDFGLA 174
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK--------CPHANASKHYVSNELRMLERFGGKNFIIK 261
GSG YG+V A G VA+K HA + ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHEN-VIG 85
Query: 262 YEGCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQG 314
F S D +++ H+ D ++K +++ +Q+ Y + R L +H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
I+HRD+KP N + + + ++DF LA
Sbjct: 146 IIHRDLKPSNLAVN-EDCELKILDFYLA 172
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N L + + ++DF LA
Sbjct: 148 HRDLKPSN-LAVNEDXELKILDFGLA 172
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLA 172
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLA 172
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNF 325
HRD+KP N
Sbjct: 148 HRDLKPSNL 156
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNF 325
HRD+KP N
Sbjct: 148 HRDLKPSNL 156
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 239 GA-ELLKKISSESA-RNYIQSLAQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 286
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 287 LDSDKRITAAQALAHAYFAQYHD 309
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 27/158 (17%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK--------CPHANASKHYVSNELRMLERFGGKNFIIK 261
GSG YG+V A G VA+K HA + ELR+L+ +N +I
Sbjct: 27 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHEN-VIG 81
Query: 262 YEGCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQG 314
F S D +++ H+ D ++K +++ +Q+ Y + R L +H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA------MVGF 346
I+HRD+KP N + + + ++DF LA M GF
Sbjct: 142 IIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMAGF 178
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLA 172
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 248 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 295
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 296 LDSDKRITAAQALAHAYFAQYHD 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 36 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 92
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 153 HRDLKPSNLAVN-EDXELKILDFGLA 177
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 23/156 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA------MVGF 346
HRD+KP N + + + ++DF LA M GF
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLARHTDDEMAGF 182
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 245 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 292
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 293 LDSDKRITAAQALAHAYFAQYHD 315
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 33 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 89
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 150 HRDLKPSNLAVN-EDCELKILDFGLA 174
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 250 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 297
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 298 LDSDKRITAAQALAHAYFAQYHD 320
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 94
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 155 HRDLKPSNLAVN-EDCELKILDFGLA 179
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 248 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 295
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 296 LDSDKRITAAQALAHAYFAQYHD 318
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 36 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 92
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 153 HRDLKPSNLAVN-EDCELKILDFGLA 177
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLAQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 23/156 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA------MVGF 346
HRD+KP N + + + ++DF LA M GF
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLARHTDDEMAGF 182
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 249 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 296
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 297 LDSDKRITAAQALAHAYFAQYHD 319
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK--------CPHANASKHYVSNELRMLERFGGKNFIIK 261
GSG YG+V A G VA+K HA + ELR+L+ +N +I
Sbjct: 37 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHEN-VIG 91
Query: 262 YEGCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQG 314
F S D +++ H+ D ++K +++ +Q+ Y + R L +H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
I+HRD+KP N + + + ++DF LA
Sbjct: 152 IIHRDLKPSNLAVN-EDCELKILDFGLA 178
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 252
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 253 GA-ELLKKISSESA-RNYIQSLAQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 300
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 301 LDSDKRITAAQALAHAYFAQYHD 323
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 41 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 97
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 98 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 157
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 158 HRDLKPSNLAVN-EDCELKILDFGLA 182
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 241
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 242 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 289
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 290 LDSDKRITAAQALAHAYFAQYHD 312
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 30 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 86
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 87 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 146
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 147 HRDLKPSNLAVN-EDCELKILDFGLA 171
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLA 172
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 249 GA-ELLKKISSESA-RNYIQSLAQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 296
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 297 LDSDKRITAAQALAHAYFAQYHD 319
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK--------CPHANASKHYVSNELRMLERFGGKNFIIK 261
GSG YG+V A G VA+K HA + ELR+L+ +N +I
Sbjct: 37 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHEN-VIG 91
Query: 262 YEGCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQG 314
F S D +++ H+ D ++K +++ +Q+ Y + R L +H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
I+HRD+KP N + + + ++DF LA
Sbjct: 152 IIHRDLKPSNLAVN-EDCELKILDFGLA 178
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 248 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 295
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 296 LDSDKRITAAQALAHAYFAQYHD 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 36 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 92
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 153 HRDLKPSNLAVN-EDXELKILDFGLA 177
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D +K I +L G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
E+ K + ES+ + + +P +N F+ P ++ DL++K L
Sbjct: 243 GA-ELLKKISSESA-RNYIQSLTQMPKMNFAN---------VFIGANPLAV-DLLEKMLV 290
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A AL H +FA H+
Sbjct: 291 LDSDKRITAAQALAHAYFAQYHD 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V A G VA+K +A + Y ELR+L+ +N +I
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHEN-VIGLL 87
Query: 264 GCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIV 316
F S D +++ H+ D ++K +++ +Q+ Y + R L +H I+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+KP N + + + ++DF LA
Sbjct: 148 HRDLKPSNLAVN-EDCELKILDFGLA 172
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFG 254
+ E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALASL 310
N I+K + V E + D + I L ++ Y + L + LA
Sbjct: 64 HPN-IVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 311 HKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 153
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 227
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 228 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 269
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 270 MLHYDPNKRISAKAALAHPFF 290
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 39/146 (26%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIK 601
G Q+ AGT G+ +PEVL R + G +DIW+ GV L L++G PF+ + + +
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVL-RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLY 215
Query: 602 DIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSL 661
K G+ D FP PEW + +
Sbjct: 216 QQIK-AGAYD-------------FPS-------------PEW-----------DTVTPEA 237
Query: 662 FDLVDKCLTVNPRLRISAEDALKHEF 687
+L+++ LT+NP RI+A +ALKH +
Sbjct: 238 KNLINQMLTINPAKRITAHEALKHPW 263
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFS--CKAVKGYLIDFNLAM-VGFD--GSFNQATLPG 357
+ A+ H+ G+VHRD+KP N L + CK L DF LA+ V D F A PG
Sbjct: 112 ILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG 171
Query: 358 TKYVPPVNGRKVPSAK 373
Y+ P RK K
Sbjct: 172 --YLSPEVLRKEAYGK 185
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSE 610
T+ +RAPE++ H +DIWS G + L+ GRT F G D ++ I +L G+
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTP 271
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
++++ + E+ SLP + + + F+ P ++ DL++K L
Sbjct: 272 PASVISRMPSHEAR-----NYINSLPQMPKRNFADV------FIGANPLAV-DLLEKMLV 319
Query: 671 VNPRLRISAEDALKHEFFAPCHE 693
++ RI+A +AL H +F+ H+
Sbjct: 320 LDTDKRITASEALAHPYFSQYHD 342
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK--------CPHANASKHYVSNELRMLERFGGKNFIIK 261
GSG YG+V + G +A+K HA + ELR+L+ +N +I
Sbjct: 60 GSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHEN-VIG 114
Query: 262 YEGCFKCGDS-----DCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQG 314
F S D +++ H+ D ++K +++ +Q+ Y + R L +H
Sbjct: 115 LLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 174
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
I+HRD+KP N + + + ++DF LA
Sbjct: 175 IIHRDLKPSNLAVN-EDCELKILDFGLA 201
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGK 256
E+F E+ G G YG VY+AR K G VVA+K + V + E+ +L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRALA 308
N I+K + V E + D LKK +D S L + Y + L + L+
Sbjct: 63 N-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQGLS 117
Query: 309 SLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 150
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 224
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 225 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 266
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 267 MLHYDPNKRISAKAALAHPFF 287
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 28/161 (17%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK-CPHA-----NASKHYVSNELRMLERFG 254
+ + + E G+G YG V ARR+ G VAIK P+A NA + EL++L+ F
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKR--TLRELKILKHFK 111
Query: 255 GKNFI---------IKYEGCFKCGDSDCFVLEHVKHDRPEVL--KKEIDLSQLQWYGYCL 303
N I + Y G FK S VL+ ++ D +++ + + L ++++ Y L
Sbjct: 112 HDNIIAIKDILRPTVPY-GEFK---SVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL 167
Query: 304 FRALASLHKQGIVHRDVKPGNFLF--SCKAVKGYLIDFNLA 342
R L +H ++HRD+KP N L +C+ G DF +A
Sbjct: 168 LRGLKYMHSAQVIHRDLKPSNLLVNENCELKIG---DFGMA 205
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 28/161 (17%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK-CPHA-----NASKHYVSNELRMLERFG 254
+ + + E G+G YG V ARR+ G VAIK P+A NA + EL++L+ F
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKR--TLRELKILKHFK 112
Query: 255 GKNFI---------IKYEGCFKCGDSDCFVLEHVKHDRPEVL--KKEIDLSQLQWYGYCL 303
N I + Y G FK S VL+ ++ D +++ + + L ++++ Y L
Sbjct: 113 HDNIIAIKDILRPTVPY-GEFK---SVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL 168
Query: 304 FRALASLHKQGIVHRDVKPGNFLF--SCKAVKGYLIDFNLA 342
R L +H ++HRD+KP N L +C+ G DF +A
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLVNENCELKIG---DFGMA 206
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 248 SQEDLNXIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 292
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 293 MLTFNPHKRIEVEQALAHPYL 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 32 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 90
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 151 KPSNLLLNT-TXDLKICDFGLARVA 174
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 248 SQEDLNXIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 292
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 293 MLTFNPHKRIEVEQALAHPYL 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 32 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 90
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 151 KPSNLLLNT-TXDLKIXDFGLARVA 174
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 9/140 (6%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK----CPHANASKHYVSNELRMLERFGGKNFIIKYEGC 265
G G YG V + R K+ G +VAIK K E+++L++ +N + E C
Sbjct: 34 GEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC 93
Query: 266 FKCGDSDCFVLEHVKH---DRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKP 322
K V E V H D E+ +D +Q Y + + + H I+HRD+KP
Sbjct: 94 -KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKP 152
Query: 323 GNFLFSCKAVKGYLIDFNLA 342
N L S V L DF A
Sbjct: 153 ENILVSQSGVVK-LCDFGFA 171
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSE 610
T+ +RAPE+L G +D+W+ G + + +G F GD + + I G+
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNL 244
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
+ +L N+ F A LP I E L + P EV+ DL KCL
Sbjct: 245 -IPRHQELFNKNPVF-----AGVRLPEIKERE--PLERRYPKLSEVV----IDLAKKCLH 292
Query: 671 VNPRLRISAEDALKHEFF 688
++P R + L H+FF
Sbjct: 293 IDPDKRPFCAELLHHDFF 310
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 210 GSGGYGTVYRARR--KNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G G Y V+ A N+ VV I P K+ + E+++LE G II K
Sbjct: 46 GRGKYSEVFEAINITNNEKVVVKILKP---VKKNKIKREIKILENLRGGPNIITLADIVK 102
Query: 268 --CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNF 325
+ V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 162
Query: 326 LFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
+ + K LID+ LA + PG +Y V R + LV
Sbjct: 163 MIDHEHRKLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 204
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 252 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 305
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 306 RYDHQSRLTAREAMEHPYF 324
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGSEDL 612
T+ +RAPEV+ +DIWS G + ++ G+T F G D +K+I K+ G+
Sbjct: 188 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPA 247
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
V +L + E+ K LP + ++ ++T P ++ +L++K L ++
Sbjct: 248 EFVQRLQSDEAK-----NYMKGLPELEKKDFASILTNAS------PLAV-NLLEKMLVLD 295
Query: 673 PRLRISAEDALKHEFFAPCHEMLRKQKLLRQGSSIDNT 710
R++A +AL H +F H+ + ++ + S D+
Sbjct: 296 AEQRVTAGEALAHPYFESLHDTEDEPQVQKYDDSFDDV 333
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGKNFIIKYEGC 265
GSG YG V A G VAIK + + ELR+L+ +N +I
Sbjct: 34 GSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHEN-VIGLLDV 92
Query: 266 FKCGDS-DCF-----VLEHVKHDRPEVLKKE-IDLSQLQWYGYCLFRALASLHKQGIVHR 318
F ++ D F V+ + D +++K E + ++Q+ Y + + L +H GI+HR
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHR 152
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLA 342
D+KPGN + + + ++DF LA
Sbjct: 153 DLKPGNLAVN-EDCELKILDFGLA 175
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
T+ +RAPE+L S +D+WS G L ++ G+ F G N + ++ G D
Sbjct: 191 VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN--QLERIIGVID 248
Query: 612 LWEVAKLHNRESSFPEDLYAA-KSLPPINLPEWCKLITKRPDFL-EVIPSS-----LFDL 664
+ + +S F + + + K I + TK + L ++ P + DL
Sbjct: 249 FPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDL 308
Query: 665 VDKCLTVNPRLRISAEDALKHEFFAPCH 692
+DK L NP RISA DALKH F + H
Sbjct: 309 LDKLLQFNPNKRISANDALKHPFVSIFH 336
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK----CPHANASKHYVSNELRMLERFGGKNFIIKYEGC 265
G G YG V+++ + G VVA+K + E+ +L G I+
Sbjct: 18 GKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNV 77
Query: 266 FKC-GDSDCF-VLEHVKHDRPEVLKKEI-DLSQLQWYGYCLFRALASLHKQGIVHRDVKP 322
+ D D + V ++++ D V++ I + Q+ Y L + + LH G++HRD+KP
Sbjct: 78 LRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKP 137
Query: 323 GNFLFSCK 330
N L + +
Sbjct: 138 SNILLNAE 145
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGK 256
E+F E+ G G YG VY+AR K G VVA+ + V + E+ +L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRALA 308
N I+K + V E + D LKK +D S L + Y + L + LA
Sbjct: 63 N-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 309 SLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 150
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 224
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 225 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 266
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 267 MLHYDPNKRISAKAALAHPFF 287
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGK 256
E+F E+ G G YG VY+AR K G VVA+ + V + E+ +L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQL--------QWYGYCLFRALA 308
N I+K + V E + D LKK +D S L + Y + L + LA
Sbjct: 62 N-IVKLLDVIHTENKLYLVFEFLHQD----LKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 309 SLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLA 342
H ++HRD+KP N L + + A+K L DF LA
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIK--LADFGLA 149
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
T +RAPE+L ++ +DIWS G ++ R F GD E + I + G+ D
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD- 223
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPI--NLPEWCKLITKRPDFLEVIPSSLFD---LVDK 667
E +P S+P + P+W R DF +V+P D L+ +
Sbjct: 224 ---------EVVWP----GVTSMPDYKPSFPKWA-----RQDFSKVVPPLDEDGRSLLSQ 265
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L +P RISA+ AL H FF
Sbjct: 266 MLHYDPNKRISAKAALAHPFF 286
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 39/146 (26%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIK 601
G+Q+ AGT G+ +PEVL R G +DIW+ GV L L++G PF+ + + +
Sbjct: 184 QGEQQAWFGFAGTPGYLSPEVL-RKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLY 242
Query: 602 DIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSL 661
K G+ D FP PEW + +
Sbjct: 243 QQIK-AGAYD-------------FPS-------------PEW-----------DTVTPEA 264
Query: 662 FDLVDKCLTVNPRLRISAEDALKHEF 687
+L+++ LT+NP RI+A+ ALKH +
Sbjct: 265 KNLINQMLTINPAKRITADQALKHPW 290
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 12/82 (14%)
Query: 301 YCLFRALAS---LHKQGIVHRDVKPGNFLFS--CKAVKGYLIDFNLAMVGFDGS----FN 351
+C+ + L S +H+ IVHRD+KP N L + CK L DF LA + G F
Sbjct: 134 HCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFG 192
Query: 352 QATLPGTKYVPPVNGRKVPSAK 373
A PG Y+ P RK P K
Sbjct: 193 FAGTPG--YLSPEVLRKDPYGK 212
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 252 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 305
Query: 670 TVNPRLRISAEDALKHEFFAPCHEMLRKQKLLRQGSS 706
+ + R++A +A++H +F + +++ Q R GSS
Sbjct: 306 RYDHQSRLTAREAMEHPYF---YTVVKDQA--RMGSS 337
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 170 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 204
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGKNFI--- 259
E+ G G YG VY+A+ + G +VA+K +A + + E+ +L+ N +
Sbjct: 27 EKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 260 --IKYEGCFKCGDSDCFVLEHVKHDRPEVL---KKEIDLSQLQWYGYCLFRALASLHKQG 314
I E C V E ++ D +VL K + SQ++ Y Y L R +A H+
Sbjct: 86 DVIHSERCL------TLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 315 IVHRDVKPGNFLF-SCKAVKGYLIDFNLA 342
I+HRD+KP N L S A+K L DF LA
Sbjct: 140 ILHRDLKPQNLLINSDGALK--LADFGLA 166
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 14/136 (10%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN-IKDIAKLRGSEDL 612
T +RAP+VL S+ +DIWS G ++ G+ F G + + + I + G+ +
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
E ++ P L+ ++ W +I P F + DL+ L +
Sbjct: 242 REWPQVQE----LP--LWKQRTFQVFEKKPWSSII---PGFCQ----EGIDLLSNMLCFD 288
Query: 673 PRLRISAEDALKHEFF 688
P RISA DA+ H +F
Sbjct: 289 PNKRISARDAMNHPYF 304
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGKNFI--- 259
E+ G G YG VY+A+ + G +VA+K +A + + E+ +L+ N +
Sbjct: 27 EKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 260 --IKYEGCFKCGDSDCFVLEHVKHDRPEVL---KKEIDLSQLQWYGYCLFRALASLHKQG 314
I E C V E ++ D +VL K + SQ++ Y Y L R +A H+
Sbjct: 86 DVIHSERCL------TLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 315 IVHRDVKPGNFLF-SCKAVKGYLIDFNLA 342
I+HRD+KP N L S A+K L DF LA
Sbjct: 140 ILHRDLKPQNLLINSDGALK--LADFGLA 166
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 14/136 (10%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN-IKDIAKLRGSEDL 612
T +RAP+VL S+ +DIWS G ++ G+ F G + + + I + G+ +
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
E ++ P L+ ++ W +I P F + DL+ L +
Sbjct: 242 REWPQVQE----LP--LWKQRTFQVFEKKPWSSII---PGFCQ----EGIDLLSNMLCFD 288
Query: 673 PRLRISAEDALKHEFF 688
P RISA DA+ H +F
Sbjct: 289 PNKRISARDAMNHPYF 304
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 252 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 305
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 306 RYDHQSRLTAREAMEHPYF 324
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 170 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 204
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 252 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 305
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 306 RYDHQSRLTAREAMEHPYF 324
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 170 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 204
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 252 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 305
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 306 RYDHQSRLTAREAMEHPYF 324
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 170 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 204
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 252 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 305
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 306 RYDHQSRLTAREAMEHPYF 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L++ + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 110 ALVFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 170 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 204
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 252 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 305
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 306 RYDHQSRLTAREAMEHPYF 324
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 170 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 204
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 252 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 305
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 306 RYDHQSRLTAREAMEHPYF 324
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 170 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 204
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 252 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 305
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 306 RYDHQSRLTAREAMEHPYF 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N L +
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHR 169
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 170 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 204
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 251 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 304
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 305 RYDHQSRLTAREAMEHPYF 323
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 109 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 168
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 169 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 203
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVA---IKCPHANASKHYVSNELRMLERFGGK 256
E++I ++ G G Y TVY+ + K +VA I+ H + E+ +L+
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLK---KEIDLSQLQWYGYCLFRALASLHKQ 313
N I+ S V E++ D + L I++ ++ + + L R LA H+Q
Sbjct: 61 N-IVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 314 GIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
++HRD+KP N L + + + L DF LA
Sbjct: 120 KVLHRDLKPQNLLINERG-ELKLADFGLA 147
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP-EQNIKDIAKLRGS--E 610
T +R P++L S ++D+W G + GR F G E+ + I ++ G+ E
Sbjct: 163 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTE 222
Query: 611 DLWEVAKLHNRE---SSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
+ W L N E ++P+ Y A++L ++ P + S DL+ K
Sbjct: 223 ETWP-GILSNEEFKTYNYPK--YRAEAL-----------LSHAPR----LDSDGADLLTK 264
Query: 668 CLTVNPRLRISAEDALKHEFFAPCHEMLRK 697
L R RISAEDA+KH FF E + K
Sbjct: 265 LLQFEGRNRISAEDAMKHPFFLSLGERIHK 294
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 252 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 305
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 306 RYDHQSRLTAREAMEHPYF 324
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 170 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 204
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 252 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 296
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 297 MLTFNPHKRIEVEQALAHPYL 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 94
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 154
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 155 KPSNLLLNT-TCDLKICDFGLARVA 178
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 253 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 297
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 298 MLTFNPHKRIEVEQALAHPYL 318
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 37 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 95
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 155
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 156 KPSNLLLNT-TCDLKICDFGLARVA 179
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 196 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 255
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 256 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 300
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 301 MLTFNPHKRIEVEQALAHPYL 321
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 40 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 98
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 158
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 159 KPSNLLLNT-TCDLKICDFGLARVA 182
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 248 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 292
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 293 MLTFNPHKRIEVEQALAHPYL 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 32 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 90
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 151 KPSNLLLNT-TCDLKICDFGLARVA 174
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 251 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 304
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 305 RYDHQSRLTAREAMEHPYF 323
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 109 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 168
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 169 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 203
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 268 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 312
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 313 MLTFNPHKRIEVEQALAHPYL 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 52 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 110
Query: 267 KCGD----SDCFVLEHVK-HDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIVHRDV 320
+ D +++ H+ D ++LK + + + ++ Y + R L +H ++HRD+
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 170
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 171 KPSNLLLNT-TXDLKICDFGLARVA 194
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 24/168 (14%)
Query: 190 DQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRM 249
D +N L +F F VE E G G VYR ++K A+K K V E+ +
Sbjct: 44 DGSNRDALSDF--FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGV 101
Query: 250 LERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC------- 302
L R N IIK + F+ VLE V E+ + ++ GY
Sbjct: 102 LLRLSHPN-IIKLKEIFETPTEISLVLELVTGG--ELFDRIVE------KGYYSERDAAD 152
Query: 303 ----LFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYL--IDFNLAMV 344
+ A+A LH+ GIVHRD+KP N L++ A L DF L+ +
Sbjct: 153 AVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 38/135 (28%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDL 612
GT G+ APE+L R GP++D+WS G+ L+ G PF+ + RG + +
Sbjct: 212 GTPGYCAPEIL-RGCAYGPEVDMWSVGIITYILLCGFEPFYDE-----------RGDQFM 259
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
+ ++ N E F P W + + + DLV K + ++
Sbjct: 260 FR--RILNCEYYFIS-------------PWW-----------DEVSLNAKDLVRKLIVLD 293
Query: 673 PRLRISAEDALKHEF 687
P+ R++ AL+H +
Sbjct: 294 PKKRLTTFQALQHPW 308
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 268 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 312
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 313 MLTFNPHKRIEVEQALAHPYL 333
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 52 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 110
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 170
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 171 KPSNLLLNT-TCDLKICDFGLARVA 194
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 252 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 296
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 297 MLTFNPHKRIEVEQALAHPYL 317
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 94
Query: 267 KCGD----SDCFVLEHV-KHDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + + D ++LK + + + ++ Y + R L +H ++HRD+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 154
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 155 KPSNLLLN-TTCDLKICDFGLARVA 178
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 190 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 249
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 250 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 303
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 304 RYDHQSRLTAREAMEHPYF 322
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 108 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 167
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 168 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 202
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G L ++ + PFF D + IAK+ G+
Sbjct: 197 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 256
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
EDL++ +N E D L + W + + L V P +L D +DK L
Sbjct: 257 EDLYDYIDKYNIEL----DPRFNDILGRHSRKRWERFVHSENQHL-VSPEAL-DFLDKLL 310
Query: 670 TVNPRLRISAEDALKHEFF 688
+ + R++A +A++H +F
Sbjct: 311 RYDHQSRLTAREAMEHPYF 329
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 273 CFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV 332
V EHV + + L + + +++Y Y + +AL H GI+HRDVKP N + +
Sbjct: 115 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 174
Query: 333 KGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLV 376
K LID+ LA + PG +Y V R + LV
Sbjct: 175 KLRLIDWGLA---------EFYHPGQEYNVRVASRYFKGPELLV 209
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 252 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 296
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 297 MLTFNPHKRIEVEQALAHPYL 317
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAI+ + Y LR +L RF +N II
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 94
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 154
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 155 KPSNLLLN-TTCDLKICDFGLARVA 178
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 253 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 297
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 298 MLTFNPHKRIEVEQALAHPYL 318
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 37 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 95
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 155
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 156 KPSNLLLNT-TCDLKICDFGLARVA 179
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 194 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 253
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 254 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 298
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 299 MLTFNPHKRIEVEQALAHPYL 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 38 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 96
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 156
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 157 KPSNLLLNT-TCDLKICDFGLARVA 180
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 185 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 244
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 245 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 289
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 290 MLTFNPHKRIEVEQALAHPYL 310
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 29 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 87
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 147
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 148 KPSNLLLNT-TCDLKICDFGLARVA 171
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 252 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 296
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 297 MLTFNPHKRIEVEQALAHPYL 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 94
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 154
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 155 KPSNLLLNT-TCDLKICDFGLARVA 178
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 248 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 292
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 293 MLTFNPHKRIEVEQALAHPYL 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 32 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 90
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 151 KPSNLLLNT-TCDLKICDFGLARVA 174
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 250 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 294
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 295 MLTFNPHKRIEVEQALAHPYL 315
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 34 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 92
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 152
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 153 KPSNLLLNT-TCDLKICDFGLARVA 176
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 245
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 246 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 290
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 291 MLTFNPHKRIEVEQALAHPYL 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 30 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 88
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 148
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 149 KPSNLLLNT-TCDLKICDFGLARVA 172
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 248 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 292
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 293 MLTFNPHKRIEVEQALAHPYL 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 32 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 90
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 151 KPSNLLLNT-TXDLKICDFGLARVA 174
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 252 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 296
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 297 MLTFNPHKRIEVEQALAHPYL 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 94
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 154
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 155 KPSNLLLNT-TXDLKICDFGLARVA 178
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 252 SQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 296
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 297 MLTFNPHKRIEVEQALAHPYL 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN-IIGINDII 94
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 154
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 155 KPSNLLLNT-TXDLKICDFGLARVA 178
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 29/178 (16%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA-SKHYVSNELRMLERFGGKNFIIK 261
F + E G+G YG VY+ R G + AIK + + E+ ML+++ I
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 262 YEGCF------KCGDSDCFVLEH---------VKHDRPEVLKKEIDLSQLQWYGYC---L 303
Y G F D V+E +K+ + LK+E W Y +
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEE-------WIAYICREI 138
Query: 304 FRALASLHKQGIVHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
R L+ LH+ ++HRD+K N L + A VK L+DF ++ + T GT Y
Sbjct: 139 LRGLSHLHQHKVIHRDIKGQNVLLTENAEVK--LVDFGVSAQLDRTVGRRNTFIGTPY 194
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 14/144 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVA---IKCPHANASKHYVS----NELRMLERFGGKNFIIKY 262
G G + TVY+AR KN +VA IK H + +K ++ E+++L+ N II
Sbjct: 19 GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN-IIGL 77
Query: 263 EGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQWYGYCLFRALASLHKQGIVHR 318
F + V + ++ D EV+ K+ L S ++ Y + L LH+ I+HR
Sbjct: 78 LDAFGHKSNISLVFDFMETDL-EVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 136
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLA 342
D+KP N L V L DF LA
Sbjct: 137 DLKPNNLLLDENGVLK-LADFGLA 159
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 34/146 (23%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLW 613
T+ +RAPE+LF ++ G +D+W+ G L L++ R PF L G DL
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPF-------------LPGDSDLD 220
Query: 614 EVAKLHN-----RESSFPE-----DLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFD 663
++ ++ E +P+ D KS P I L L D
Sbjct: 221 QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHH----------IFSAAGDDLLD 270
Query: 664 LVDKCLTVNPRLRISAEDALKHEFFA 689
L+ NP RI+A ALK ++F+
Sbjct: 271 LIQGLFLFNPCARITATQALKMKYFS 296
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 59/146 (40%), Gaps = 19/146 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL L R SLP N W +L S DL+DK
Sbjct: 250 SQEDLNCGINLKARNYLL--------SLPHKNKVPWNRLFPNAD-------SKALDLLDK 294
Query: 668 CLTVNPRLRISAEDALKHEFFAPCHE 693
LT NP RI E AL H + A ++
Sbjct: 295 MLTFNPHKRIEVEQALAHPYLAQYYD 320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRML--------ERFGGKNFIIK 261
G G YG V A + VAIK + Y LR + E G N II+
Sbjct: 34 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIR 93
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIVHRDV 320
+ D V + ++ D ++LK + + + ++ Y + R L +H ++HRD+
Sbjct: 94 APTIEQMKDV-YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 152
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + + DF LA V
Sbjct: 153 KPSNLLLNTTS-DLKICDFGLARVA 176
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 91/225 (40%), Gaps = 48/225 (21%)
Query: 502 AVAGAGLMNKGP---SDLSDLQILLLTKLHPVPVLII-FYLLLGNGKQKKDGPCAGTKGF 557
++G M+K DL +LL +K + II F L KK GT +
Sbjct: 135 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 194
Query: 558 RAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAK 617
APEVL + + K D+WS GV L L+ G PF G E +I + K
Sbjct: 195 IAPEVLHGTYDE--KCDVWSTGVILYILLSGCPPFNGANEYDI--------------LKK 238
Query: 618 LHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRI 677
+ + +F LP+W K + S DL+ K LT P +RI
Sbjct: 239 VEKGKYTF-------------ELPQWKK-----------VSESAKDLIRKMLTYVPSMRI 274
Query: 678 SAEDALKHEFFAPCHEMLRKQKLLRQGSSIDNTTGNPSHKQCSAR 722
SA DAL HE+ + K+++ S+DN N Q + +
Sbjct: 275 SARDALDHEWI----QTYTKEQISVDVPSLDNAILNIRQFQGTQK 315
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKG--YLIDFNLAMVGFDGSFNQATLPGTKY 360
+ + +HK IVHRD+KP N L K+ +IDF L+ F+ S GT Y
Sbjct: 135 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDKIGTAY 193
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ-NIKDIAKLRGSEDL 612
++ +RAPE++F +QH +DIWS G +M+G F GD + +I ++ G
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR 253
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
+ KL+ + DLY +K +P W + + D +DL+ L
Sbjct: 254 EVLRKLNPSHTDV--DLYNSKGIP------WSNVFS---DHSLKDAKEAYDLLSALLQYL 302
Query: 673 PRLRISAEDALKHEFFAPCHE 693
P R+ +AL H +F H+
Sbjct: 303 PEERMKPYEALCHPYFDELHD 323
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNF- 258
+ F VE G G +GTV + K+ G VAIK + + EL++++ +
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK--KVIQDPRFRNRELQIMQDLAVLHHP 79
Query: 259 -IIKYEGCF-KCGDSD------CFVLEHV---------KHDRPEVLKKEIDLSQLQWYGY 301
I++ + F G+ D V+E+V + R +V I ++ + +
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPI---LIKVFLF 136
Query: 302 CLFRALASLH--KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
L R++ LH + HRD+KP N L + L DF A
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSA 179
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG----DPEQNIKDIAKLR 607
T+ +RAPE++ S+ +DIWS G L ++ R F G D +I I
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 245
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
EDL + L R SLP N W +L S DL+DK
Sbjct: 246 EQEDLNCIINLKARNYLL--------SLPHKNKVPWNRLFPNA-------DSKALDLLDK 290
Query: 668 CLTVNPRLRISAEDALKHEFF 688
LT NP RI E AL H +
Sbjct: 291 MLTFNPHKRIEVEQALAHPYL 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELR---MLERFGGKNFIIKYEGCF 266
G G YG V A + VAIK + Y LR +L RF +N II
Sbjct: 30 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDII 88
Query: 267 KCGD----SDCFVLEHVKHDRPEVLKKEIDLS--QLQWYGYCLFRALASLHKQGIVHRDV 320
+ D ++++ + L K LS + ++ Y + R L +H ++HRD+
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 148
Query: 321 KPGNFLFSCKAVKGYLIDFNLAMVG 345
KP N L + + DF LA V
Sbjct: 149 KPSNLLLNT-TCDLKICDFGLARVA 172
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 85/209 (40%), Gaps = 45/209 (21%)
Query: 515 DLSDLQILLLTKLHPVPVLII-FYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKL 573
DL +LL +K + II F L KK GT + APEVL + + K
Sbjct: 174 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE--KC 231
Query: 574 DIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAK 633
D+WS GV L L+ G PF G E +I + K+ + +F
Sbjct: 232 DVWSTGVILYILLSGCPPFNGANEYDI--------------LKKVEKGKYTF-------- 269
Query: 634 SLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAPCHE 693
LP+W K + S DL+ K LT P +RISA DAL HE+ +
Sbjct: 270 -----ELPQWKK-----------VSESAKDLIRKMLTYVPSMRISARDALDHEWI----Q 309
Query: 694 MLRKQKLLRQGSSIDNTTGNPSHKQCSAR 722
K+++ S+DN N Q + +
Sbjct: 310 TYTKEQISVDVPSLDNAILNIRQFQGTQK 338
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKG--YLIDFNLAMVGFDGSFNQATLPGTKY 360
+ + +HK IVHRD+KP N L K+ +IDF L+ F+ S GT Y
Sbjct: 158 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDKIGTAY 216
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 85/209 (40%), Gaps = 45/209 (21%)
Query: 515 DLSDLQILLLTKLHPVPVLII-FYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKL 573
DL +LL +K + II F L KK GT + APEVL + + K
Sbjct: 175 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE--KC 232
Query: 574 DIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAK 633
D+WS GV L L+ G PF G E +I + K+ + +F
Sbjct: 233 DVWSTGVILYILLSGCPPFNGANEYDI--------------LKKVEKGKYTF-------- 270
Query: 634 SLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAPCHE 693
LP+W K + S DL+ K LT P +RISA DAL HE+ +
Sbjct: 271 -----ELPQWKK-----------VSESAKDLIRKMLTYVPSMRISARDALDHEWI----Q 310
Query: 694 MLRKQKLLRQGSSIDNTTGNPSHKQCSAR 722
K+++ S+DN N Q + +
Sbjct: 311 TYTKEQISVDVPSLDNAILNIRQFQGTQK 339
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKG--YLIDFNLAMVGFDGSFNQATLPGTKY 360
+ + +HK IVHRD+KP N L K+ +IDF L+ F+ S GT Y
Sbjct: 159 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDKIGTAY 217
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 36/137 (26%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT + APEVL R ++ G D+WS GVTL +++G P F DPE+ +D K
Sbjct: 178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP-FEDPEEP-RDYRK------ 229
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
+ ++ + + S P+D+ + PE C LI+ +
Sbjct: 230 --TIQRILSVKYSIPDDIRIS--------PECCHLIS------------------RIFVA 261
Query: 672 NPRLRISAEDALKHEFF 688
+P RIS + H +F
Sbjct: 262 DPATRISIPEIKTHSWF 278
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCG 269
G+G +G V++A+ + VAIK K + + EL+++ N + + G
Sbjct: 49 GNGSFGVVFQAKLV-ESDEVAIK--KVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNG 105
Query: 270 DS-DCFVLEHVKHDRPEV----------LKKEIDLSQLQWYGYCLFRALASLHKQGIVHR 318
D D L V PE LK+ + + ++ Y Y L R+LA +H GI HR
Sbjct: 106 DKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHR 165
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
D+KP N L + LIDF A + G N + + Y P
Sbjct: 166 DIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAP 210
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
++ +RAPE++F + + +DIWS G + LM G+ F G+ + +I K+ G+
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSR 263
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ ++ Y P I + K+ R P DL+ + L
Sbjct: 264 EQIKTMNPN--------YMEHKFPQIRPHPFSKVFRPR------TPPDAIDLISRLLEYT 309
Query: 673 PRLRISAEDALKHEFF 688
P R++A +AL H FF
Sbjct: 310 PSARLTAIEALCHPFF 325
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT+ + +PE L + H + DIWS G++L+ + +GR P P + K++ + G +
Sbjct: 226 VGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAVGRYPI---PPPDAKELELMFGCQV 281
Query: 612 LWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF-----DL 664
+ A+ R + L Y S PP+ + E I P +PS++F D
Sbjct: 282 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP--PKLPSAVFSLEFQDF 339
Query: 665 VDKCLTVNPRLRISAEDALKHEFF 688
V+KCL NP R + + H F
Sbjct: 340 VNKCLIKNPAERADLKQLMVHAFI 363
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEG 264
E G+G G V++ K G V+A K H A ++ + EL++L +I+ + G
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP-YIVGFYG 133
Query: 265 CFKCGDSDCFVLEHVKHDR-PEVLKK--EIDLSQLQWYGYCLFRALASL-HKQGIVHRDV 320
F +EH+ +VLKK I L + + L L K I+HRDV
Sbjct: 134 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 193
Query: 321 KPGNFLFSCK--------AVKGYLID-FNLAMVGFDGSFNQATLPGTKY 360
KP N L + + V G LID + VG + L GT Y
Sbjct: 194 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 242
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 84/209 (40%), Gaps = 45/209 (21%)
Query: 515 DLSDLQILLLTKLHPVPVLII-FYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKL 573
DL +LL +K + II F L KK GT + APEVL + + K
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDE--KC 208
Query: 574 DIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAK 633
D+WS GV L L+ G PF G E +I + K+ + +F
Sbjct: 209 DVWSTGVILYILLSGCPPFNGANEYDI--------------LKKVEKGKYTF-------- 246
Query: 634 SLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAPCHE 693
LP+W K + S DL+ K LT P RISA DAL HE+ +
Sbjct: 247 -----ELPQWKK-----------VSESAKDLIRKXLTYVPSXRISARDALDHEWI----Q 286
Query: 694 MLRKQKLLRQGSSIDNTTGNPSHKQCSAR 722
K+++ S+DN N Q + +
Sbjct: 287 TYTKEQISVDVPSLDNAILNIRQFQGTQK 315
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKG--YLIDFNLAMVGFDGSFNQATLPGTKY 360
+ + HK IVHRD+KP N L K+ +IDF L+ F+ S GT Y
Sbjct: 135 VLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKXKDKIGTAY 193
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGS- 609
T+ +RAPE++ H +DIWS G + L+ G+ F G D +K I ++ G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTP 248
Query: 610 --EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
E L +++ H R +SLPP+ + + F P ++ DL+ +
Sbjct: 249 SPEVLAKISSEHARTY--------IQSLPPMPQKDLSSI------FRGANPLAI-DLLGR 293
Query: 668 CLTVNPRLRISAEDALKHEFFAPCHE 693
L ++ R+SA +AL H +F+ H+
Sbjct: 294 MLVLDSDQRVSAAEALAHAYFSQYHD 319
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHA---NASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V Y AR + V + P +A + Y ELR+L+ +N I +
Sbjct: 37 GSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY--RELRLLKHLKHENVIGLLD 94
Query: 264 GCFKCGDSDCF-----VLEHVKHDRPEVLKKE-IDLSQLQWYGYCLFRALASLHKQGIVH 317
+ F V + D ++K + + +Q+ Y L R L +H GI+H
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIH 154
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLA 342
RD+KP N + + + ++DF LA
Sbjct: 155 RDLKPSNVAVNEDS-ELRILDFGLA 178
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGS- 609
T+ +RAPE++ H +DIWS G + L+ G+ F G D +K I ++ G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTP 248
Query: 610 --EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
E L +++ H R +SLPP+ + + F P ++ DL+ +
Sbjct: 249 SPEVLAKISSEHARTY--------IQSLPPMPQKDLSSI------FRGANPLAI-DLLGR 293
Query: 668 CLTVNPRLRISAEDALKHEFFAPCHE 693
L ++ R+SA +AL H +F+ H+
Sbjct: 294 MLVLDSDQRVSAAEALAHAYFSQYHD 319
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHA---NASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V Y AR + V + P +A + Y ELR+L+ +N I +
Sbjct: 37 GSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY--RELRLLKHLKHENVIGLLD 94
Query: 264 GCFKCGDSDCF-----VLEHVKHDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIVH 317
+ F V + D ++K + + +Q+ Y L R L +H GI+H
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIH 154
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLA 342
RD+KP N + + + ++DF LA
Sbjct: 155 RDLKPSNVAVNEDS-ELRILDFGLA 178
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSEDL 612
++ +RAPE++ + P +D+WS G L++G+ F G+ + I ++ G+
Sbjct: 204 SRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTK 263
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
++ +++ Y P + +W K++ E PS DL+++ L
Sbjct: 264 EQMIRMNPH--------YTEVRFPTLKAKDWRKILP------EGTPSLAIDLLEQILRYE 309
Query: 673 PRLRISAEDALKHEFF 688
P LRI+ +A+ H FF
Sbjct: 310 PDLRINPYEAMAHPFF 325
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 275 VLEHVKHDRPEVLK------KEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFS 328
++E+V +VLK + I ++ + Y Y LFRA+ +H GI HRD+KP N L +
Sbjct: 116 IMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN 175
Query: 329 CKAVKGYLIDFNLA 342
K L DF A
Sbjct: 176 SKDNTLKLCDFGSA 189
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFII 260
E F V E+ G G YG+VY+A K G +VAIK + + E+ ++++ + ++
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPH-VV 87
Query: 261 KYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIV 316
KY G + V+E+ D + K + ++ + L LH +
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLA 342
HRD+K GN L + + L DF +A
Sbjct: 148 HRDIKAGNILLNTEG-HAKLADFGVA 172
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRGS- 609
T+ +RAPE++ H +DIWS G + L+ G+ F G D +K I ++ G+
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTP 240
Query: 610 --EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
E L +++ H R +SLPP+ + + F P ++ DL+ +
Sbjct: 241 SPEVLAKISSEHARTY--------IQSLPPMPQKDLSSI------FRGANPLAI-DLLGR 285
Query: 668 CLTVNPRLRISAEDALKHEFFAPCHE 693
L ++ R+SA +AL H +F+ H+
Sbjct: 286 MLVLDSDQRVSAAEALAHAYFSQYHD 311
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPH---ANASKHYVSNELRMLERFGGKNFIIKYE 263
GSG YG+V Y AR + V + P +A + Y ELR+L+ +N I +
Sbjct: 29 GSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY--RELRLLKHLKHENVIGLLD 86
Query: 264 GCFKCGDSDCF-----VLEHVKHDRPEVLK-KEIDLSQLQWYGYCLFRALASLHKQGIVH 317
+ F V + D ++K + + +Q+ Y L R L +H GI+H
Sbjct: 87 VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIH 146
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLA 342
RD+KP N + + + ++DF LA
Sbjct: 147 RDLKPSNVAVN-EDCELRILDFGLA 170
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 78/190 (41%), Gaps = 44/190 (23%)
Query: 502 AVAGAGLMNKGP---SDLSDLQILLLTKLHPVPVLII-FYLLLGNGKQKKDGPCAGTKGF 557
++G M+K DL +LL +K + II F L KK GT +
Sbjct: 141 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 200
Query: 558 RAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAK 617
APEVL + + K D+WS GV L L+ G PF G E +I + K
Sbjct: 201 IAPEVLHGTYDE--KCDVWSTGVILYILLSGCPPFNGANEYDI--------------LKK 244
Query: 618 LHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRI 677
+ + +F LP+W K + S DL+ K LT P +RI
Sbjct: 245 VEKGKYTF-------------ELPQWKK-----------VSESAKDLIRKMLTYVPSMRI 280
Query: 678 SAEDALKHEF 687
SA DAL HE+
Sbjct: 281 SARDALDHEW 290
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKG--YLIDFNLAMVGFDGSFNQATLPGTKY 360
+ + +HK IVHRD+KP N L K+ +IDF L+ F+ S GT Y
Sbjct: 141 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDKIGTAY 199
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 39/133 (29%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
AGT G+ +PEVL + + P +DIW+ GV L L++G PF+ + + +
Sbjct: 191 AGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRL----------- 238
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
A++ +P PEW + + L+D LTV
Sbjct: 239 ---YAQIKAGAYDYPS-------------PEW-----------DTVTPEAKSLIDSMLTV 271
Query: 672 NPRLRISAEDALK 684
NP+ RI+A+ ALK
Sbjct: 272 NPKKRITADQALK 284
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFII 260
+++ V+EE G G + V R K G A K + +K + + + LER +
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN---TKKLSARDFQKLEREARICRKL 85
Query: 261 KYEGCFKCGDSDCFVLEHVKHDR--PEVLKKEI--DLSQLQWYG-----YCLFRALASL- 310
++ + DS + E H V E+ D+ ++Y +C+ + L S+
Sbjct: 86 QHPNIVRLHDS---IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 142
Query: 311 --HKQGIVHRDVKPGNFLFSCKAVKGY---LIDFNLAMVGFDGSFNQATLPGTKYVPPVN 365
H GIVHR++KP N L + KA KG L DF LA+ D Y+ P
Sbjct: 143 YCHSNGIVHRNLKPENLLLASKA-KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 201
Query: 366 GRKVPSAK 373
+K P +K
Sbjct: 202 LKKDPYSK 209
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 76/191 (39%), Gaps = 36/191 (18%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK----CPHANASKHYVSNELRMLERFGGKNFIIKYEGC 265
G G YG V++ R ++ G +VAIK K E+RML++ N + E
Sbjct: 12 GEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE-V 70
Query: 266 FKCGDSDCFVLEHVKH------DR-----PEVLKKEIDLSQLQWYGYCLFRALASLHKQG 314
F+ V E+ H DR PE L K I LQ +C HK
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFC--------HKHN 122
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKS 374
+HRDVKP N L + +V L DF A + T P Y V R S +
Sbjct: 123 CIHRDVKPENILITKHSVIK-LCDFGFARL--------LTGPSDYYDDEVATRWYRSPEL 173
Query: 375 LVAVKQDTRKG 385
LV DT+ G
Sbjct: 174 LVG---DTQYG 181
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
T+ +R+PE+L GP +D+W+ G L+ G + G + ++ + +R +
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPG--KSDVDQLYLIRKT-- 218
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
L ++ H + S + K P ++ L K P+ I L+ CL +
Sbjct: 219 LGDLIPRHQQVFSTNQYFSGVKIPDPEDME---PLELKFPN----ISYPALGLLKGCLHM 271
Query: 672 NPRLRISAEDALKHEFFAPCHEM 694
+P R++ E L H +F E+
Sbjct: 272 DPTERLTCEQLLHHPYFENIREI 294
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT+ + +PE L + H + DIWS G++L+ + +GR P P + K++ + G +
Sbjct: 164 VGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAVGRYPI---PPPDAKELELMFGCQV 219
Query: 612 LWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF-----DL 664
+ A+ R + L Y S PP+ + E I P +PS +F D
Sbjct: 220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDF 277
Query: 665 VDKCLTVNPRLRISAEDALKHEFF 688
V+KCL NP R + + H F
Sbjct: 278 VNKCLIKNPAERADLKQLMVHAFI 301
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEG 264
E G+G G V++ K G V+A K H A ++ + EL++L +I+ + G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP-YIVGFYG 71
Query: 265 CFKCGDSDCFVLEHVKHDR-PEVLKK--EIDLSQLQWYGYCLFRALASL-HKQGIVHRDV 320
F +EH+ +VLKK I L + + L L K I+HRDV
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 321 KPGNFLFSCK--------AVKGYLID-FNLAMVGFDGSFNQATLPGTKY 360
KP N L + + V G LID + VG + L GT Y
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT+ + +PE L + H + DIWS G++L+ + +GR P P + K++ + G +
Sbjct: 164 VGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAVGRYPI---PPPDAKELELMFGCQV 219
Query: 612 LWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF-----DL 664
+ A+ R + L Y S PP+ + E I P +PS +F D
Sbjct: 220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDF 277
Query: 665 VDKCLTVNPRLRISAEDALKHEFF 688
V+KCL NP R + + H F
Sbjct: 278 VNKCLIKNPAERADLKQLMVHAFI 301
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEG 264
E G+G G V++ K G V+A K H A ++ + EL++L +I+ + G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP-YIVGFYG 71
Query: 265 CFKCGDSDCFVLEHVKHDR-PEVLKK--EIDLSQLQWYGYCLFRALASL-HKQGIVHRDV 320
F +EH+ +VLKK I L + + L L K I+HRDV
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 321 KPGNFLFSCK--------AVKGYLID-FNLAMVGFDGSFNQATLPGTKY 360
KP N L + + V G LID + VG + L GT Y
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT+ + +PE L + H + DIWS G++L+ + +GR P P + K++ + G +
Sbjct: 164 VGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAVGRYPI---PPPDAKELELMFGCQV 219
Query: 612 LWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF-----DL 664
+ A+ R + L Y S PP+ + E I P +PS +F D
Sbjct: 220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDF 277
Query: 665 VDKCLTVNPRLRISAEDALKHEFF 688
V+KCL NP R + + H F
Sbjct: 278 VNKCLIKNPAERADLKQLMVHAFI 301
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEG 264
E G+G G V++ K G V+A K H A ++ + EL++L +I+ + G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP-YIVGFYG 71
Query: 265 CFKCGDSDCFVLEHVKHDR-PEVLKK--EIDLSQLQWYGYCLFRALASL-HKQGIVHRDV 320
F +EH+ +VLKK I L + + L L K I+HRDV
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 321 KPGNFLFSCK--------AVKGYLID-FNLAMVGFDGSFNQATLPGTKY 360
KP N L + + V G LID + VG + L GT Y
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT+ + +PE L + H + DIWS G++L+ + +GR P P + K++ + G +
Sbjct: 164 VGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAVGRYPI---PPPDAKELELMFGCQV 219
Query: 612 LWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF-----DL 664
+ A+ R + L Y S PP+ + E I P +PS +F D
Sbjct: 220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDF 277
Query: 665 VDKCLTVNPRLRISAEDALKHEFF 688
V+KCL NP R + + H F
Sbjct: 278 VNKCLIKNPAERADLKQLMVHAFI 301
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEG 264
E G+G G V++ K G V+A K H A ++ + EL++L +I+ + G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP-YIVGFYG 71
Query: 265 CFKCGDSDCFVLEHVKHDR-PEVLKK--EIDLSQLQWYGYCLFRALASL-HKQGIVHRDV 320
F +EH+ +VLKK I L + + L L K I+HRDV
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 321 KPGNFLFSCK--------AVKGYLID-FNLAMVGFDGSFNQATLPGTKY 360
KP N L + + V G LID + VG + L GT Y
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 39/133 (29%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
AGT G+ +PEVL + + P +DIW+ GV L L++G PF+ + + +
Sbjct: 167 AGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRL----------- 214
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
A++ +P PEW + + L+D LTV
Sbjct: 215 ---YAQIKAGAYDYPS-------------PEW-----------DTVTPEAKSLIDSMLTV 247
Query: 672 NPRLRISAEDALK 684
NP+ RI+A+ ALK
Sbjct: 248 NPKKRITADQALK 260
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKGY---LIDFNLAMVGFDGSFNQATLPGTK 359
+ ++A H GIVHR++KP N L + KA KG L DF LA+ D
Sbjct: 113 ILESIAYCHSNGIVHRNLKPENLLLASKA-KGAAVKLADFGLAIEVNDSEAWHGFAGTPG 171
Query: 360 YVPPVNGRKVPSAK 373
Y+ P +K P +K
Sbjct: 172 YLSPEVLKKDPYSK 185
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 39/133 (29%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
AGT G+ +PEVL + + P +DIW+ GV L L++G PF+ + + +
Sbjct: 168 AGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRL----------- 215
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
A++ +P PEW + + L+D LTV
Sbjct: 216 ---YAQIKAGAYDYPS-------------PEW-----------DTVTPEAKSLIDSMLTV 248
Query: 672 NPRLRISAEDALK 684
NP+ RI+A+ ALK
Sbjct: 249 NPKKRITADQALK 261
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKGY---LIDFNLAMVGFDGSFNQATLPGTK 359
+ ++A H GIVHR++KP N L + KA KG L DF LA+ D
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLASKA-KGAAVKLADFGLAIEVNDSEAWHGFAGTPG 172
Query: 360 YVPPVNGRKVPSAK 373
Y+ P +K P +K
Sbjct: 173 YLSPEVLKKDPYSK 186
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 39/133 (29%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
AGT G+ +PEVL + + P +DIW+ GV L L++G PF+ + + +
Sbjct: 168 AGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRL----------- 215
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
A++ +P PEW + + L+D LTV
Sbjct: 216 ---YAQIKAGAYDYPS-------------PEW-----------DTVTPEAKSLIDSMLTV 248
Query: 672 NPRLRISAEDALK 684
NP+ RI+A+ ALK
Sbjct: 249 NPKKRITADQALK 261
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKGY---LIDFNLAMVGFDGSFNQATLPGTK 359
+ ++A H GIVHR++KP N L + KA KG L DF LA+ D
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLASKA-KGAAVKLADFGLAIEVNDSEAWHGFAGTPG 172
Query: 360 YVPPVNGRKVPSAK 373
Y+ P +K P +K
Sbjct: 173 YLSPEVLKKDPYSK 186
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT+ + +PE L + H + DIWS G++L+ + +GR P P + K++ + G +
Sbjct: 191 VGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAVGRYPI---PPPDAKELELMFGCQV 246
Query: 612 LWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF-----DL 664
+ A+ R + L + S PP+ + E I P +PS +F D
Sbjct: 247 EGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDF 304
Query: 665 VDKCLTVNPRLRISAEDALKHEFF 688
V+KCL NP R + + H F
Sbjct: 305 VNKCLIKNPAERADLKQLMVHAFI 328
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEG 264
E G+G G V++ K G V+A K H A ++ + EL++L +I+ + G
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP-YIVGFYG 98
Query: 265 CFKCGDSDCFVLEHVKHDR-PEVLKK--EIDLSQLQWYGYCLFRALASL-HKQGIVHRDV 320
F +EH+ +VLKK I L + + L L K I+HRDV
Sbjct: 99 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 158
Query: 321 KPGNFLFSCK--------AVKGYLID-FNLAMVGFDGSFNQATLPGTKY 360
KP N L + + V G LID + VG + L GT Y
Sbjct: 159 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 207
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY---VSNELRMLERFGGKNFI----IKY 262
G G YG V A K G +VAIK + E+++L+ F +N I I+
Sbjct: 20 GEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQR 79
Query: 263 EGCFKCGDSDCFVLEHVKHDRPEVLKKE-IDLSQLQWYGYCLFRALASLHKQGIVHRDVK 321
F+ + + E ++ D V+ + + +Q++ Y RA+ LH ++HRD+K
Sbjct: 80 PDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLK 139
Query: 322 PGNFLFSCKAVKGYLIDFNLAMV 344
P N L + + DF LA +
Sbjct: 140 PSNLLINSNC-DLKVCDFGLARI 161
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 20/157 (12%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNI 600
G+Q T+ +RAPEV+ S +D+WS G L L + R F G D +
Sbjct: 173 TGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 601 KDIAKLRGS----EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEV 656
I + G+ DL + RE +Y A L + F V
Sbjct: 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKM--------------FPRV 278
Query: 657 IPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAPCHE 693
P + DL+ + L +P RI+A++AL+H + H+
Sbjct: 279 NPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY---VSNELRMLERFGGKNFI----IKY 262
G G YG V A K G +VAIK + E+++L+ F +N I I+
Sbjct: 20 GEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQR 79
Query: 263 EGCFKCGDSDCFVLEHVKHDRPEVLKKE-IDLSQLQWYGYCLFRALASLHKQGIVHRDVK 321
F+ + + E ++ D V+ + + +Q++ Y RA+ LH ++HRD+K
Sbjct: 80 PDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLK 139
Query: 322 PGNFLFSCKAVKGYLIDFNLAMV 344
P N L + + DF LA +
Sbjct: 140 PSNLLINSNC-DLKVCDFGLARI 161
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 20/157 (12%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNI 600
G+Q T+ +RAPEV+ S +D+WS G L L + R F G D +
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 601 KDIAKLRGS----EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEV 656
I + G+ DL + RE +Y A L + F V
Sbjct: 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKM--------------FPRV 278
Query: 657 IPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAPCHE 693
P + DL+ + L +P RI+A++AL+H + H+
Sbjct: 279 NPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 40/133 (30%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDL 612
GT + APEVL R + K D+WSAGV L L+ G PF+G E +I
Sbjct: 185 GTAYYIAPEVL-RGTYD-EKCDVWSAGVILYILLSGTPPFYGKNEYDI------------ 230
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
+ ++ + +F +LP+W I DL+ K LT +
Sbjct: 231 --LKRVETGKYAF-------------DLPQW-----------RTISDDAKDLIRKMLTFH 264
Query: 673 PRLRISAEDALKH 685
P LRI+A L+H
Sbjct: 265 PSLRITATQCLEH 277
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 18/146 (12%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH----YVSNELRMLERFGGKNFIIKYEGC 265
G G +G V + + + A+K + ++K+ + E+ +L++ N + +E
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE-- 88
Query: 266 FKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC-----LFRALASLHKQGIVHRDV 320
DS F + + E+ + I + + +F + +HK IVHRD+
Sbjct: 89 -ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 321 KPGNFLFSCKA----VKGYLIDFNLA 342
KP N L K +K +IDF L+
Sbjct: 148 KPENILLESKEKDCDIK--IIDFGLS 171
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY---VSNELRMLERFGGKNFI----IKY 262
G G YG V A K G +VAIK + E+++L+ F +N I I+
Sbjct: 20 GEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQR 79
Query: 263 EGCFKCGDSDCFVLEHVKHDRPEVLKKE-IDLSQLQWYGYCLFRALASLHKQGIVHRDVK 321
F+ + + E ++ D V+ + + +Q++ Y RA+ LH ++HRD+K
Sbjct: 80 PDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLK 139
Query: 322 PGNFLFSCKAVKGYLIDFNLAMV 344
P N L + + DF LA +
Sbjct: 140 PSNLLINSNC-DLKVCDFGLARI 161
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 20/157 (12%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNI 600
G+Q T+ +RAPEV+ S +D+WS G L L + R F G D +
Sbjct: 173 TGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 601 KDIAKLRGS----EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEV 656
I + G+ DL + RE +Y A L + F V
Sbjct: 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKM--------------FPRV 278
Query: 657 IPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAPCHE 693
P + DL+ + L +P RI+A++AL+H + H+
Sbjct: 279 NPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 40/133 (30%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDL 612
GT + APEVL R + K D+WSAGV L L+ G PF+G E +I
Sbjct: 185 GTAYYIAPEVL-RGTYD-EKCDVWSAGVILYILLSGTPPFYGKNEYDI------------ 230
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
+ ++ + +F +LP+W I DL+ K LT +
Sbjct: 231 --LKRVETGKYAF-------------DLPQW-----------RTISDDAKDLIRKMLTFH 264
Query: 673 PRLRISAEDALKH 685
P LRI+A L+H
Sbjct: 265 PSLRITATQCLEH 277
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKA----VKGYLIDFNLA 342
+F + +HK IVHRD+KP N L K +K +IDF L+
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK--IIDFGLS 171
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 67/166 (40%), Gaps = 23/166 (13%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNE-------LRMLERFGGKNFII 260
E G G YGTVY+AR + G VA+K + + LR LE F N +
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 261 KYEGCFKCGDSD-----CFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALASLH 311
+ C +D V EHV D L K + ++ R L LH
Sbjct: 71 LMDVC-ATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 312 KQGIVHRDVKPGNFLF-SCKAVKGYLIDFNLAMVGFDGSFNQATLP 356
IVHRD+KP N L S VK L DF LA + S+ A P
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVK--LADFGLARI---YSYQMALFP 170
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 28/145 (19%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF-GDPEQN-IKDIAKLR 607
P T +RAPEVL +S + P +D+WS G + M R P F G+ E + + I L
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATP-VDMWSVG-CIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
Query: 608 G--SEDLWEVAKLHNRESSFPEDLYAAKSLPPIN--LPEWCKLITKRPDFLEVIPSSLFD 663
G ED W R+ S P + + P+ +PE + S
Sbjct: 228 GLPPEDDWP------RDVSLPRGAFPPRGPRPVQSVVPE--------------MEESGAQ 267
Query: 664 LVDKCLTVNPRLRISAEDALKHEFF 688
L+ + LT NP RISA AL+H +
Sbjct: 268 LLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 40/133 (30%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDL 612
GT + APEVL R + K D+WSAGV L L+ G PF+G E +I
Sbjct: 185 GTAYYIAPEVL-RGTYD-EKCDVWSAGVILYILLSGTPPFYGKNEYDI------------ 230
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
+ ++ + +F +LP+W I DL+ K LT +
Sbjct: 231 --LKRVETGKYAF-------------DLPQW-----------RTISDDAKDLIRKMLTFH 264
Query: 673 PRLRISAEDALKH 685
P LRI+A L+H
Sbjct: 265 PSLRITATQCLEH 277
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKA----VKGYLIDFNLA 342
+F + +HK IVHRD+KP N L K +K +IDF L+
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK--IIDFGLS 171
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 28/144 (19%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS-- 609
T +R P+VLF ++ +D+WSAG L P F D + +K I +L G+
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 610 EDLW-EVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIP---SSLFDLV 665
E+ W + KL + + P +Y A + + V+P ++ DL+
Sbjct: 224 EEQWPSMTKLPDYK---PYPMYPATT-----------------SLVNVVPKLNATGRDLL 263
Query: 666 DKCLTVNPRLRISAEDALKHEFFA 689
L NP RISAE+AL+H +F+
Sbjct: 264 QNLLKCNPVQRISAEEALQHPYFS 287
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGKNFIIKY 262
E+ G G YGTV++A+ + +VA+K + V + E+ +L+ KN I++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN-IVRL 66
Query: 263 EGCFKCGDSDCFVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRD 319
V E D + ++D ++ + + L + L H + ++HRD
Sbjct: 67 HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 320 VKPGNFLFSCKAVKGYLIDFNLA-MVGFDGSFNQATLPGTKYVPP 363
+KP N L + + + L DF LA G A + Y PP
Sbjct: 127 LKPQNLLIN-RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPP 170
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 28/144 (19%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS-- 609
T +R P+VLF ++ +D+WSAG L P F D + +K I +L G+
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 610 EDLW-EVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIP---SSLFDLV 665
E+ W + KL + + P +Y A + + V+P ++ DL+
Sbjct: 224 EEQWPSMTKLPDYK---PYPMYPATT-----------------SLVNVVPKLNATGRDLL 263
Query: 666 DKCLTVNPRLRISAEDALKHEFFA 689
L NP RISAE+AL+H +F+
Sbjct: 264 QNLLKCNPVQRISAEEALQHPYFS 287
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGKNFIIKY 262
E+ G G YGTV++A+ + +VA+K + V + E+ +L+ KN I++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN-IVRL 66
Query: 263 EGCFKCGDSDCFVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRD 319
V E D + ++D ++ + + L + L H + ++HRD
Sbjct: 67 HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 320 VKPGNFLFS 328
+KP N L +
Sbjct: 127 LKPQNLLIN 135
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 10/169 (5%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS--KHYVSNELRMLERFGGKNFIIKYEG 264
E+ G G GTVY A G VAI+ + K + NE+ ++ N I+ Y
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-IVNYLD 84
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGIVHRDVKP 322
+ GD V+E++ + E + + Q C +AL LH ++HRD+K
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 323 GNFLFSCK-AVKGYLIDFNLAMVGFDGSFNQATLPGTKY--VPPVNGRK 368
N L +VK L DF ++T+ GT Y P V RK
Sbjct: 145 DNILLGMDGSVK--LTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 42/146 (28%)
Query: 544 KQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
+Q K GT + APEV+ R + GPK+DIWS G+ + ++ G P+ +
Sbjct: 169 EQSKRSTMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIEGEPPYLNE-------- 219
Query: 604 AKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF- 662
LR L+ +A E PE L S++F
Sbjct: 220 NPLRA---LYLIATNGTPELQNPEKL-----------------------------SAIFR 247
Query: 663 DLVDKCLTVNPRLRISAEDALKHEFF 688
D +++CL ++ R SA++ L+H+F
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS--KHYVSNELRMLERFGGKNF 258
++FI E GSG + V+ +++ G + A+KC + + + NE+ +L++ +N
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN- 67
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH--------DRPEVLKKEIDLSQLQWYGYCLFRALASL 310
I+ E ++ V++ V +R +K+ L Q + A+ L
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ-----VLSAVKYL 122
Query: 311 HKQGIVHRDVKPGNFLFSC--KAVKGYLIDFNLAMVGFDGSFNQAT-LPGTKYVPPVNGR 367
H+ GIVHRD+KP N L+ + K + DF L+ + +G + A PG YV P
Sbjct: 123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPG--YVAPEVLA 180
Query: 368 KVPSAKSL 375
+ P +K++
Sbjct: 181 QKPYSKAV 188
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Query: 496 LHSNGIAVAGAGLMNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDG---PCA 552
LH NGI DL +L LT ++I + G K +++G
Sbjct: 122 LHENGIV----------HRDLKPENLLYLTPEENSKIMITDF---GLSKMEQNGIMSTAC 168
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNI 600
GT G+ APEVL + + +D WS GV L+ G PF+ + E +
Sbjct: 169 GTPGYVAPEVLAQKPY-SKAVDCWSIGVITYILLCGYPPFYEETESKL 215
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 63/154 (40%), Gaps = 20/154 (12%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNE-------LRMLERFGGKNFII 260
E G G YGTVY+AR + G VA+K + + LR LE F N +
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 261 KYEGCFKCGDSD-----CFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALASLH 311
+ C +D V EHV D L K + ++ R L LH
Sbjct: 71 LMDVC-ATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 312 KQGIVHRDVKPGNFLF-SCKAVKGYLIDFNLAMV 344
IVHRD+KP N L S VK L DF LA +
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVK--LADFGLARI 161
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 28/150 (18%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF-GDPEQN-IKD 602
Q P T +RAPEVL +S + P +D+WS G + M R P F G+ E + +
Sbjct: 165 QMALAPVVVTLWYRAPEVLLQSTYATP-VDMWSVG-CIFAEMFRRKPLFCGNSEADQLGK 222
Query: 603 IAKLRG--SEDLWEVAKLHNRESSFPEDLYAAKSLPPIN--LPEWCKLITKRPDFLEVIP 658
I L G ED W R+ S P + + P+ +PE +
Sbjct: 223 IFDLIGLPPEDDWP------RDVSLPRGAFPPRGPRPVQSVVPE--------------ME 262
Query: 659 SSLFDLVDKCLTVNPRLRISAEDALKHEFF 688
S L+ + LT NP RISA AL+H +
Sbjct: 263 ESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 63/154 (40%), Gaps = 20/154 (12%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNE-------LRMLERFGGKNFII 260
E G G YGTVY+AR + G VA+K + + LR LE F N +
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 261 KYEGCFKCGDSD-----CFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALASLH 311
+ C +D V EHV D L K + ++ R L LH
Sbjct: 71 LMDVC-ATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 312 KQGIVHRDVKPGNFLF-SCKAVKGYLIDFNLAMV 344
IVHRD+KP N L S VK L DF LA +
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVK--LADFGLARI 161
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 28/145 (19%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF-GDPEQN-IKDIAKLR 607
P T +RAPEVL +S + P +D+WS G + M R P F G+ E + + I L
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATP-VDMWSVG-CIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
Query: 608 G--SEDLWEVAKLHNRESSFPEDLYAAKSLPPIN--LPEWCKLITKRPDFLEVIPSSLFD 663
G ED W R+ S P + + P+ +PE + S
Sbjct: 228 GLPPEDDWP------RDVSLPRGAFPPRGPRPVQSVVPE--------------MEESGAQ 267
Query: 664 LVDKCLTVNPRLRISAEDALKHEFF 688
L+ + LT NP RISA AL+H +
Sbjct: 268 LLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 21/187 (11%)
Query: 190 DQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVS 244
+ +N + NFE V G G +G V AR K G + A+K +
Sbjct: 15 NSSNRLGIDNFEFIRVL---GKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTM 71
Query: 245 NELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKE--IDLSQLQWYGY 301
E R+L F+ + CF+ D FV+E V D ++K D ++ ++Y
Sbjct: 72 TEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAA 131
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFS----CKAVKGYLIDFNLAMVGFDGSFNQATLPG 357
+ AL LH +GI++RD+K N L CK L DF + G AT G
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLLDHEGHCK-----LADFGMCKEGICNGVTTATFCG 186
Query: 358 T-KYVPP 363
T Y+ P
Sbjct: 187 TPDYIAP 193
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNI 600
GT + APE+L + GP +D W+ GV L ++ G PF + E ++
Sbjct: 185 CGTPDYIAPEIL-QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL 232
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
Q KD GT + APEVL + ++ G D+WS GVTL +++G P F DPE+
Sbjct: 172 QPKD--TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP-FEDPEE 222
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 551 CAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + APEVL + ++ G D+WS GVTL +++G P F DPE+
Sbjct: 176 AVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP-FEDPEE 222
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + APEVL + ++ G D+WS GVTL +++G P F DPE+
Sbjct: 176 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP-FEDPEE 221
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 64/157 (40%), Gaps = 23/157 (14%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIK---CPHANASKHYVSNE-------LRMLERFGGKN 257
E G G YGTVY+AR + G VA+K P+ + LR LE F N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 258 FIIKYEGCFKCGDSD-----CFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALA 308
+ + C +D V EHV D L K + ++ R L
Sbjct: 76 VVRLMDVC-ATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 134
Query: 309 SLHKQGIVHRDVKPGNFLF-SCKAVKGYLIDFNLAMV 344
LH IVHRD+KP N L S VK L DF LA +
Sbjct: 135 FLHANCIVHRDLKPENILVTSGGTVK--LADFGLARI 169
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 63/146 (43%), Gaps = 30/146 (20%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF-GDPEQN-IKDIAKLR 607
P T +RAPEVL +S + P +D+WS G + M R P F G+ E + + I L
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATP-VDMWSVG-CIFAEMFRRKPLFCGNSEADQLGKIFDLI 235
Query: 608 G--SEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPS---SLF 662
G ED W R+ S P + + P+ V+P S
Sbjct: 236 GLPPEDDWP------RDVSLPRGAFPPRGPRPVQ---------------SVVPEMEESGA 274
Query: 663 DLVDKCLTVNPRLRISAEDALKHEFF 688
L+ + LT NP RISA AL+H +
Sbjct: 275 QLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + APEVL + ++ G D+WS GVTL +++G P F DPE+
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP-FEDPEE 222
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + APEVL + ++ G D+WS GVTL +++G P F DPE+
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP-FEDPEE 222
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 43/141 (30%)
Query: 553 GTKGFRAPEVLFRSQHQ-----GPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLR 607
GT G+ APE+L S + G ++D+W+ GV L L+ G PF+ + + I LR
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFW-----HRRQILMLR 315
Query: 608 GSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
E Y S PEW + S++ DL+ +
Sbjct: 316 ----------------MIMEGQYQFSS------PEW-----------DDRSSTVKDLISR 342
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L V+P R++AE AL+H FF
Sbjct: 343 LLQVDPEARLTAEQALQHPFF 363
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 61/163 (37%), Gaps = 23/163 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASK----------HYVSNELRMLERFGGKNFI 259
G G V R + G A+K A + E +L + G I
Sbjct: 103 GRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHI 162
Query: 260 IKYEGCFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQLQWYGY--CLFRALASLHKQGIV 316
I ++ V + + K + + L +++ LS+ + L A++ LH IV
Sbjct: 163 ITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIV 222
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK 359
HRD+KP N L+D N+ + D F+ PG K
Sbjct: 223 HRDLKPENI----------LLDDNMQIRLSDFGFSCHLEPGEK 255
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 181 LKATGNHNDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP--HANA 238
KA DQ + ++L +S++ + G G G V AR K+ G VA+K
Sbjct: 30 FKAALRMVVDQGDPRLL--LDSYV---KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ 84
Query: 239 SKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQW 298
+ + NE+ ++ + N + Y+ + G+ ++E ++ + ++ L++ Q
Sbjct: 85 RRELLFNEVVIMRDYQHFNVVEMYKS-YLVGEELWVLMEFLQGGALTDIVSQVRLNEEQI 143
Query: 299 YGYC--LFRALASLHKQGIVHRDVKPGNFLFS 328
C + +ALA LH QG++HRD+K + L +
Sbjct: 144 ATVCEAVLQALAYLHAQGVIHRDIKSDSILLT 175
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 51/157 (32%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD-PEQNIKDIAKLRGSE 610
GT + APEV+ RS + ++DIWS G+ ++ ++ G P+F D P Q +K +LR S
Sbjct: 202 VGTPYWMAPEVISRSLY-ATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK---RLRDS- 256
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
PP L K+ DFLE + L
Sbjct: 257 -------------------------PPPKLKNSHKVSPVLRDFLE-----------RMLV 280
Query: 671 VNPRLRISAEDALKHEF---------FAPCHEMLRKQ 698
+P+ R +A++ L H F P ++ RKQ
Sbjct: 281 RDPQERATAQELLDHPFLLQTGLPECLVPLIQLYRKQ 317
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF-GDPEQN-IKDIAKLRGS-- 609
T +R PE+L + GP +D+W AG ++ M R+P G+ EQ+ + I++L GS
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAG-CIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
++W + N E +L + + + K + P L DL+DK L
Sbjct: 251 PEVW--PNVDNYELYEKLELVKGQKR---KVKDRLKAYVRDPYAL--------DLIDKLL 297
Query: 670 TVNPRLRISAEDALKHEFF 688
++P RI ++DAL H+FF
Sbjct: 298 VLDPAQRIDSDDALNHDFF 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH----YVSNELRMLERFGGKNFIIKYEGC 265
G G +G V++AR + G VA+K K E+++L+ +N + E C
Sbjct: 27 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC 86
Query: 266 F-------KCGDSDCFVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGI 315
+C S V + +HD +L + LS+++ L L +H+ I
Sbjct: 87 RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI 146
Query: 316 VHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+HRD+K N L + V L DF LA
Sbjct: 147 LHRDMKAANVLITRDGVLK-LADFGLA 172
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF-GDPEQN-IKDIAKLRGS-- 609
T +R PE+L + GP +D+W AG ++ M R+P G+ EQ+ + I++L GS
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAG-CIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
++W + N E +L + + + R P +L DL+DK L
Sbjct: 251 PEVW--PNVDNYELYEKLELVKGQK----------RKVKDRLKAYVRDPYAL-DLIDKLL 297
Query: 670 TVNPRLRISAEDALKHEFF 688
++P RI ++DAL H+FF
Sbjct: 298 VLDPAQRIDSDDALNHDFF 316
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH----YVSNELRMLERFGGKNFIIKYEGC 265
G G +G V++AR + G VA+K K E+++L+ +N + E C
Sbjct: 27 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC 86
Query: 266 F-------KCGDSDCFVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGI 315
+C S V + +HD +L + LS+++ L L +H+ I
Sbjct: 87 RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI 146
Query: 316 VHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+HRD+K N L + V L DF LA
Sbjct: 147 LHRDMKAANVLITRDGVLK-LADFGLA 172
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF-GDPEQN-IKDIAKLRGS-- 609
T +R PE+L + GP +D+W AG ++ M R+P G+ EQ+ + I++L GS
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAG-CIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
++W + N E +L + + + R P +L DL+DK L
Sbjct: 251 PEVW--PNVDNYELYEKLELVKGQK----------RKVKDRLKAYVRDPYAL-DLIDKLL 297
Query: 670 TVNPRLRISAEDALKHEFF 688
++P RI ++DAL H+FF
Sbjct: 298 VLDPAQRIDSDDALNHDFF 316
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH----YVSNELRMLERFGGKNFIIKYEGC 265
G G +G V++AR + G VA+K K E+++L+ +N + E C
Sbjct: 27 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC 86
Query: 266 F-------KCGDSDCFVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGI 315
+C S V + +HD +L + LS+++ L L +H+ I
Sbjct: 87 RTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI 146
Query: 316 VHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+HRD+K N L + V L DF LA
Sbjct: 147 LHRDMKAANVLITRDGVLK-LADFGLA 172
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 10/169 (5%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS--KHYVSNELRMLERFGGKNFIIKYEG 264
E+ G G GTVY A G VAI+ + K + NE+ ++ N I+ Y
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-IVNYLD 85
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGIVHRDVKP 322
+ GD V+E++ + E + + Q C +AL LH ++HR++K
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKS 145
Query: 323 GNFLFSCK-AVKGYLIDFNLAMVGFDGSFNQATLPGTKY--VPPVNGRK 368
N L +VK L DF ++T+ GT Y P V RK
Sbjct: 146 DNILLGMDGSVK--LTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 192
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 42/146 (28%)
Query: 544 KQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
+Q K GT + APEV+ R + GPK+DIWS G+ + ++ G P+ +
Sbjct: 170 EQSKRSTMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIEGEPPYLNE-------- 220
Query: 604 AKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF- 662
LR L+ +A E PE L S++F
Sbjct: 221 NPLRA---LYLIATNGTPELQNPEKL-----------------------------SAIFR 248
Query: 663 DLVDKCLTVNPRLRISAEDALKHEFF 688
D +++CL ++ R SA++ ++H+F
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF-GDPEQN-IKDIAKLRGS-- 609
T +R PE+L + GP +D+W AG ++ M R+P G+ EQ+ + I++L GS
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAG-CIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
++W + N E +L + + + R P +L DL+DK L
Sbjct: 250 PEVW--PNVDNYELYEKLELVKGQK----------RKVKDRLKAYVRDPYAL-DLIDKLL 296
Query: 670 TVNPRLRISAEDALKHEFF 688
++P RI ++DAL H+FF
Sbjct: 297 VLDPAQRIDSDDALNHDFF 315
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH----YVSNELRMLERFGGKNFIIKYEGC 265
G G +G V++AR + G VA+K K E+++L+ +N + E C
Sbjct: 26 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC 85
Query: 266 F-------KCGDSDCFVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGI 315
+C S V + +HD +L + LS+++ L L +H+ I
Sbjct: 86 RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI 145
Query: 316 VHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+HRD+K N L + V L DF LA
Sbjct: 146 LHRDMKAANVLITRDGVLK-LADFGLA 171
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
+ E+V + +VL + +++Y Y L +AL H QGI+HRDVKP N + + K
Sbjct: 107 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 166
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVK 379
LID+ LA + PG +Y V R + LV ++
Sbjct: 167 LRLIDWGLA---------EFYHPGKEYNVRVASRYFKGPELLVDLQ 203
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G ++ + PFF D + IAK+ G+
Sbjct: 188 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 247
Query: 610 EDLWEVAKLHNRESSFP--EDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
+ L V R P E L S P W K + D ++ D +DK
Sbjct: 248 DGL-NVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMN--ADNQHLVSPEAIDFLDK 299
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L + + R++A +A+ H +F
Sbjct: 300 LLRYDHQERLTALEAMTHPYF 320
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
+ E+V + +VL + +++Y Y L +AL H QGI+HRDVKP N + + K
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 164
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVK 379
LID+ LA + PG +Y V R + LV ++
Sbjct: 165 LRLIDWGLA---------EFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G ++ + PFF D + IAK+ G+
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 610 EDLWEVAKLHNRESSFP--EDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
+ L V R P E L S P W K + D ++ D +DK
Sbjct: 246 DGL-NVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMN--ADNQHLVSPEAIDFLDK 297
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L + + R++A +A+ H +F
Sbjct: 298 LLRYDHQERLTALEAMTHPYF 318
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
+ E+V + +VL + +++Y Y L +AL H QGI+HRDVKP N + + K
Sbjct: 126 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 185
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVK 379
LID+ LA + PG +Y V R + LV ++
Sbjct: 186 LRLIDWGLA---------EFYHPGKEYNVRVASRYFKGPELLVDLQ 222
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 14/142 (9%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G ++ + PFF D + IAK+ G+
Sbjct: 207 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 266
Query: 610 EDLWEVAKLHNRESSFP---EDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD 666
+ L A L+ E L S P W K + D ++ D +D
Sbjct: 267 DGL--NAYLNKYRIELDPQLEALVGRHSRKP-----WLKFMN--ADNQHLVSPEAIDFLD 317
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
K L + + R++A +A+ H +F
Sbjct: 318 KLLRYDHQERLTALEAMTHPYF 339
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 10/169 (5%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS--KHYVSNELRMLERFGGKNFIIKYEG 264
E+ G G GTVY A G VAI+ + K + NE+ ++ N I+ Y
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-IVNYLD 85
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGIVHRDVKP 322
+ GD V+E++ + E + + Q C +AL LH ++HRD+K
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 145
Query: 323 GNFLFSCK-AVKGYLIDFNLAMVGFDGSFNQATLPGTKY--VPPVNGRK 368
N L +VK L DF ++ + GT Y P V RK
Sbjct: 146 DNILLGMDGSVK--LTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK 192
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 42/146 (28%)
Query: 544 KQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
+Q K GT + APEV+ R + GPK+DIWS G+ + ++ G P+ +
Sbjct: 170 EQSKRSXMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIEGEPPYLNE-------- 220
Query: 604 AKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF- 662
LR L+ +A E PE L S++F
Sbjct: 221 NPLRA---LYLIATNGTPELQNPEKL-----------------------------SAIFR 248
Query: 663 DLVDKCLTVNPRLRISAEDALKHEFF 688
D +++CL ++ R SA++ ++H+F
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
+ E+V + +VL + +++Y Y L +AL H QGI+HRDVKP N + + K
Sbjct: 106 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 165
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVK 379
LID+ LA + PG +Y V R + LV ++
Sbjct: 166 LRLIDWGLA---------EFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G ++ + PFF D + IAK+ G+
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
Query: 610 EDLWEVAKLHNRESSFP--EDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
+ L V R P E L S P W K + D ++ D +DK
Sbjct: 247 DGL-NVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMN--ADNQHLVSPEAIDFLDK 298
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L + + R++A +A+ H +F
Sbjct: 299 LLRYDHQERLTALEAMTHPYF 319
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
+ E+V + +VL + +++Y Y L +AL H QGI+HRDVKP N + + K
Sbjct: 106 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 165
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVK 379
LID+ LA + PG +Y V R + LV ++
Sbjct: 166 LRLIDWGLA---------EFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G ++ + PFF D + IAK+ G+
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
Query: 610 EDLWEVAKLHNRESSFP--EDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
+ L V R P E L S P W K + D ++ D +DK
Sbjct: 247 DGL-NVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMN--ADNQHLVSPEAIDFLDK 298
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L + + R++A +A+ H +F
Sbjct: 299 LLRYDHQERLTALEAMTHPYF 319
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
+ E+V + +VL + +++Y Y L +AL H QGI+HRDVKP N + + K
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 164
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVK 379
LID+ LA + PG +Y V R + LV ++
Sbjct: 165 LRLIDWGLA---------EFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G ++ + PFF D + IAK+ G+
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 610 EDLWEVAKLHNRESSFP--EDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
+ L V R P E L S P W K + D ++ D +DK
Sbjct: 246 DGL-NVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMN--ADNQHLVSPEAIDFLDK 297
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L + + R++A +A+ H +F
Sbjct: 298 LLRYDHQERLTALEAMTHPYF 318
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
+ E+V + +VL + +++Y Y L +AL H QGI+HRDVKP N + + K
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 164
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVK 379
LID+ LA + PG +Y V R + LV ++
Sbjct: 165 LRLIDWGLA---------EFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G ++ + PFF D + IAK+ G+
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 610 EDLWEVAKLHNRESSFP--EDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
+ L V R P E L S P W K + D ++ D +DK
Sbjct: 246 DGL-NVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMN--ADNQHLVSPEAIDFLDK 297
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L + + R++A +A+ H +F
Sbjct: 298 LLRYDHQERLTALEAMTHPYF 318
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
+ E+V + +VL + +++Y Y L +AL H QGI+HRDVKP N + + K
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 164
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVK 379
LID+ LA + PG +Y V R + LV ++
Sbjct: 165 LRLIDWGLA---------EFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G ++ + PFF D + IAK+ G+
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 610 EDLWEVAKLHNRESSFP--EDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
+ L V R P E L S P W K + D ++ D +DK
Sbjct: 246 DGL-NVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMN--ADNQHLVSPEAIDFLDK 297
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L + + R++A +A+ H +F
Sbjct: 298 LLRYDHQERLTALEAMTHPYF 318
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
+ E+V + +VL + +++Y Y L +AL H QGI+HRDVKP N + + K
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 164
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVK 379
LID+ LA + PG +Y V R + LV ++
Sbjct: 165 LRLIDWGLA---------EFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G ++ + PFF D + IAK+ G+
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 610 EDLWEVAKLHNRESSFP--EDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
+ L V R P E L S P W K + D ++ D +DK
Sbjct: 246 DGL-NVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMN--ADNQHLVSPEAIDFLDK 297
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L + + R++A +A+ H +F
Sbjct: 298 LLRYDHQERLTALEAMTHPYF 318
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
+ E+V + +VL + +++Y Y L +AL H QGI+HRDVKP N + + K
Sbjct: 105 LIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 164
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVK 379
LID+ LA + PG +Y V R + LV ++
Sbjct: 165 LRLIDWGLA---------EFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKDIAKLRGS 609
++ F+ PE+L Q LD+WS G ++ + PFF D + IAK+ G+
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 610 EDLWEVAKLHNRESSFP--EDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK 667
+ L V R P E L S P W K + D ++ D +DK
Sbjct: 246 DGL-NVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMN--ADNQHLVSPEAIDFLDK 297
Query: 668 CLTVNPRLRISAEDALKHEFF 688
L + + R++A +A+ H +F
Sbjct: 298 LLRYDHQERLTALEAMTHPYF 318
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 10/169 (5%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS--KHYVSNELRMLERFGGKNFIIKYEG 264
E+ G G GTVY A G VAI+ + K + NE+ ++ N I+ Y
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-IVNYLD 84
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGIVHRDVKP 322
+ GD V+E++ + E + + Q C +AL LH ++HRD+K
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 323 GNFLFSCK-AVKGYLIDFNLAMVGFDGSFNQATLPGTKY--VPPVNGRK 368
N L +VK L DF ++ + GT Y P V RK
Sbjct: 145 DNILLGMDGSVK--LTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK 191
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 42/146 (28%)
Query: 544 KQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
+Q K GT + APEV+ R + GPK+DIWS G+ + ++ G P+ +
Sbjct: 169 EQSKRSXMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIEGEPPYLNE-------- 219
Query: 604 AKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF- 662
LR L+ +A E PE L S++F
Sbjct: 220 NPLRA---LYLIATNGTPELQNPEKL-----------------------------SAIFR 247
Query: 663 DLVDKCLTVNPRLRISAEDALKHEFF 688
D +++CL ++ R SA++ L+H+F
Sbjct: 248 DFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK---HYVSNELRMLERFGGKNFI 259
F +E G+G + V A K G + A+KC A K + NE+ +L + +N I
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHEN-I 82
Query: 260 IKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGYCLFRALASLHKQ 313
+ E ++ + V++ V DR + E D S L + A+ LH+
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLI---RQVLDAVYYLHRM 139
Query: 314 GIVHRDVKPGNFLFSCKAVKGYLI--DFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPS 371
GIVHRD+KP N L+ + + ++ DF L+ + G YV P + P
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPY 199
Query: 372 AKSL 375
+K++
Sbjct: 200 SKAV 203
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 543 GKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNI 600
GK GT G+ APEVL + + +D WS GV L+ G PF+ + + +
Sbjct: 174 GKGDVMSTACGTPGYVAPEVLAQKPY-SKAVDCWSIGVIAYILLCGYPPFYDENDSKL 230
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 10/169 (5%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS--KHYVSNELRMLERFGGKNFIIKYEG 264
E+ G G GTVY A G VAI+ + K + NE+ ++ N I+ Y
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-IVNYLD 84
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGIVHRDVKP 322
+ GD V+E++ + E + + Q C +AL LH ++HRD+K
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 323 GNFLFSCK-AVKGYLIDFNLAMVGFDGSFNQATLPGTKY--VPPVNGRK 368
N L +VK L DF ++ + GT Y P V RK
Sbjct: 145 DNILLGMDGSVK--LTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRK 191
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 42/146 (28%)
Query: 544 KQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
+Q K GT + APEV+ R + GPK+DIWS G+ + ++ G P+ +
Sbjct: 169 EQSKRSEMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIEGEPPYLNE-------- 219
Query: 604 AKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF- 662
LR L+ +A E PE L S++F
Sbjct: 220 NPLRA---LYLIATNGTPELQNPEKL-----------------------------SAIFR 247
Query: 663 DLVDKCLTVNPRLRISAEDALKHEFF 688
D +++CL ++ R SA++ L+H+F
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF-FGDPEQNIKDIAKLRGSE 610
T+ +RAPEV+ P D+WS G L+ +G T F D ++++ + ++ G
Sbjct: 195 VSTRHYRAPEVILALGWSQP-CDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPL 253
Query: 611 DLWEVAKLHNRESSFPEDL-YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
+ K R+ + L + S + CK + + +V LFDL+ K L
Sbjct: 254 PKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKML 313
Query: 670 TVNPRLRISAEDALKHEFF 688
+P RI+ +ALKH FF
Sbjct: 314 EYDPAKRITLREALKHPFF 332
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSC-KAVKGYLIDFNLA 342
+F AL LH QGI HRD+KP NFLFS K+ + L+DF L+
Sbjct: 177 IFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 540 LGNGKQKKDGPCAGTKGFRAPEVL-FRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG 594
L NG+ AGT F APEVL ++ GPK D WSAGV L L++G PF G
Sbjct: 223 LNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPG 278
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 198 PNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKN 257
PN E + + E G G +G VY+A+ K G + A K S+ + + + +E +
Sbjct: 9 PN-EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYIVEIEILATCD 66
Query: 258 --FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEID--LSQLQWYGYC--LFRALASLH 311
+I+K G + ++E + + E+D L++ Q C + AL LH
Sbjct: 67 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
+ I+HRD+K GN L + + L DF ++ + + GT Y
Sbjct: 127 SKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPY 174
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 19/181 (10%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQ-----WYGYCLFRALAS 309
N I++ G F +LE+ R EV K+ LS+ Y L AL+
Sbjct: 72 HPN-ILRLYGYFHDATRVYLILEYA--PRGEVYKELQKLSKFDEQRTATYITELANALSY 128
Query: 310 LHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNG 366
H + ++HRD+KP N L A + + DF ++ S + TL GT Y+PP + G
Sbjct: 129 CHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMIEG 185
Query: 367 R 367
R
Sbjct: 186 R 186
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 173 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 198 PNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKN 257
PN E + + E G G +G VY+A+ K G + A K S+ + + + +E +
Sbjct: 17 PN-EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYIVEIEILATCD 74
Query: 258 --FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEID--LSQLQWYGYC--LFRALASLH 311
+I+K G + ++E + + E+D L++ Q C + AL LH
Sbjct: 75 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 134
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
+ I+HRD+K GN L + + L DF ++ + + GT Y
Sbjct: 135 SKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPY 182
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 48/198 (24%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGP----CAGTKGFRAPEVLFRSQHQG 570
DL I+LL K P+P + + + G + +DG GT F APE++ + G
Sbjct: 140 DLKPENIMLLDKNIPIPHIKL--IDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-NYEPLG 196
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLY 630
+ D+WS GV L+ G +PF GD +Q +A + + F E+ +
Sbjct: 197 LEADMWSIGVITYILLSGASPFLGDTKQET--------------LANITSVSYDFDEEFF 242
Query: 631 AAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAP 690
+ S E K D + K L R R++ ++AL+H + P
Sbjct: 243 SHTS-------ELAK-----------------DFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 691 CHEMLRKQKLLRQGSSID 708
+Q ++R+ S ++
Sbjct: 279 VD---NQQAMVRRESVVN 293
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA---IKCPHANASKHYVSNE-----LRMLERFGGKNF 258
EE GSG + V + R K+ G A IK + AS+ VS E + +L + N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN- 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
+I ++ +LE V + + L ++ LS+ + + + + LH + I
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
H D+KP N + K + LIDF LA DG + ++V P
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 48/198 (24%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGP----CAGTKGFRAPEVLFRSQHQG 570
DL I+LL K P+P + + + G + +DG GT F APE++ + G
Sbjct: 140 DLKPENIMLLDKNIPIPHIKL--IDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-NYEPLG 196
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLY 630
+ D+WS GV L+ G +PF GD +Q +A + + F E+ +
Sbjct: 197 LEADMWSIGVITYILLSGASPFLGDTKQET--------------LANITSVSYDFDEEFF 242
Query: 631 AAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAP 690
+ S E K D + K L R R++ ++AL+H + P
Sbjct: 243 SHTS-------ELAK-----------------DFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 691 CHEMLRKQKLLRQGSSID 708
+Q ++R+ S ++
Sbjct: 279 VD---NQQAMVRRESVVN 293
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA---IKCPHANASKHYVSNE-----LRMLERFGGKNF 258
EE GSG + V + R K+ G A IK + AS+ VS E + +L + N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN- 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
+I ++ +LE V + + L ++ LS+ + + + + LH + I
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
H D+KP N + K + LIDF LA DG + ++V P
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 23/140 (16%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF-----GDPEQNIKDIAKLRG 608
T +RAP+VL S+ +DIWS G + M+ TP F D I I
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVG-CIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN 221
Query: 609 SEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
S++ V +L + +F + LP W FL+ + S DL+ K
Sbjct: 222 SKNWPNVTELPKYDPNFT----VYEPLP------W-------ESFLKGLDESGIDLLSKM 264
Query: 669 LTVNPRLRISAEDALKHEFF 688
L ++P RI+A+ AL+H +F
Sbjct: 265 LKLDPNQRITAKQALEHAYF 284
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGKNFIIKY 262
E+ G G YG VY+A+ N G A+K + + E+ +L+ N I+K
Sbjct: 8 EKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN-IVKL 65
Query: 263 EGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQ-------LQWYGYCLFRALASLHKQGI 315
V EH+ D LKK +D+ + + + L +A H + +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQD----LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 316 VHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+HRD+KP N L + + + + DF LA
Sbjct: 122 LHRDLKPQNLLINREG-ELKIADFGLA 147
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 23/140 (16%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF-----GDPEQNIKDIAKLRG 608
T +RAP+VL S+ +DIWS G + M+ TP F D I I
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVG-CIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN 221
Query: 609 SEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
S++ V +L + +F + LP W FL+ + S DL+ K
Sbjct: 222 SKNWPNVTELPKYDPNFT----VYEPLP------W-------ESFLKGLDESGIDLLSKM 264
Query: 669 LTVNPRLRISAEDALKHEFF 688
L ++P RI+A+ AL+H +F
Sbjct: 265 LKLDPNQRITAKQALEHAYF 284
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGKNFIIKY 262
E+ G G YG VY+A+ N G A+K + + E+ +L+ N I+K
Sbjct: 8 EKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN-IVKL 65
Query: 263 EGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQ-------LQWYGYCLFRALASLHKQGI 315
V EH+ D LKK +D+ + + + L +A H + +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQD----LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 316 VHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+HRD+KP N L + + + + DF LA
Sbjct: 122 LHRDLKPQNLLINREG-ELKIADFGLA 147
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEG 264
E G+G G V + + + G ++A K H A ++ + EL++L +I+ + G
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSP-YIVGFYG 81
Query: 265 CFKCGDSDCFVLEHVKHDR-PEVLK--KEIDLSQLQWYGYCLFRALASL-HKQGIVHRDV 320
F +EH+ +VLK K I L + R LA L K I+HRDV
Sbjct: 82 AFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDV 141
Query: 321 KPGNFLFSCK--------AVKGYLID-FNLAMVGFDGSFNQATLPGTKY 360
KP N L + + V G LID + VG L GT Y
Sbjct: 142 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHY 190
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 17/148 (11%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT+ + APE L + H + DIWS G++L+ L +GR P P + K++ + G
Sbjct: 174 VGTRSYMAPERL-QGTHYSVQSDIWSMGLSLVELAVGRYPI---PPPDAKELEAIFGRPV 229
Query: 612 L-WEVAKLHNRESSFPEDL-----YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF--- 662
+ E + H+ + S P + + E I P +P+ +F
Sbjct: 230 VDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPP--PKLPNGVFTPD 287
Query: 663 --DLVDKCLTVNPRLRISAEDALKHEFF 688
+ V+KCL NP R + H F
Sbjct: 288 FQEFVNKCLIKNPAERADLKMLTNHTFI 315
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 48/198 (24%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGP----CAGTKGFRAPEVLFRSQHQG 570
DL I+LL K P+P + + + G + +DG GT F APE++ + G
Sbjct: 140 DLKPENIMLLDKNIPIPHIKL--IDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-NYEPLG 196
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLY 630
+ D+WS GV L+ G +PF GD +Q +A + F E+ +
Sbjct: 197 LEADMWSIGVITYILLSGASPFLGDTKQET--------------LANITAVSYDFDEEFF 242
Query: 631 AAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAP 690
+ S E K D + K L R R++ ++AL+H + P
Sbjct: 243 SQTS-------ELAK-----------------DFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 691 CHEMLRKQKLLRQGSSID 708
+Q ++R+ S ++
Sbjct: 279 VD---NQQAMVRRESVVN 293
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA---IKCPHANASKHYVSNE-----LRMLERFGGKNF 258
EE GSG + V + R K+ G A IK + AS+ VS E + +L + N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN- 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
+I ++ +LE V + + L ++ LS+ + + + + LH + I
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
H D+KP N + K + LIDF LA DG + ++V P
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 41/188 (21%)
Query: 502 AVAGAGLMNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPC-AGTKGFRAP 560
AVA +N DL L LT P+ +I + L K K GT + +P
Sbjct: 135 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSP 194
Query: 561 EVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHN 620
+VL GP+ D WSAGV + L+ G PF + + + K+
Sbjct: 195 QVL--EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEV--------------MLKIRE 238
Query: 621 RESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAE 680
+FPE D+L V P + L+ + LT +P+ RI++
Sbjct: 239 GTFTFPEK-----------------------DWLNVSPQAE-SLIRRLLTKSPKQRITSL 274
Query: 681 DALKHEFF 688
AL+HE+F
Sbjct: 275 QALEHEWF 282
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 32/182 (17%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN------ELRMLERFG 254
+ + +E G G +G V A +K GT I+ K++V + E+ +++
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQK--GT--RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 255 GKNFIIKYEGCFK-----------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCL 303
N I YE F+ C + F E V H R + +E D +++ +
Sbjct: 82 HPNIIRLYE-TFEDNTDIYLVMELCTGGELF--ERVVHKR---VFRESDAARIM---KDV 132
Query: 304 FRALASLHKQGIVHRDVKPGNFLFSCKAVKG--YLIDFNLAMVGFDGSFNQATLPGTKYV 361
A+A HK + HRD+KP NFLF + LIDF LA G + + YV
Sbjct: 133 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 192
Query: 362 PP 363
P
Sbjct: 193 SP 194
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFII 260
+ ++V+E G G Y R K A+K + SK S E+ +L R+G II
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKV--IDKSKRDPSEEIEILLRYGQHPNII 84
Query: 261 KYEGCFKCGDSDCFVLEHVKHDR--PEVLKKEI-DLSQLQWYGYCLFRALASLHKQGIVH 317
+ + G V E ++ ++L+++ + + + + + + LH QG+VH
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVH 144
Query: 318 RDVKPGNFLF 327
RD+KP N L+
Sbjct: 145 RDLKPSNILY 154
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 52/138 (37%), Gaps = 37/138 (26%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
PC T F APEVL R Q DIWS G+ L ++ G TPF P ++I GS
Sbjct: 185 PCY-TANFVAPEVLKR-QGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS 242
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
++ W + + DLV K L
Sbjct: 243 GKF------------------------TLSGGNW-----------NTVSETAKDLVSKML 267
Query: 670 TVNPRLRISAEDALKHEF 687
V+P R++A+ L+H +
Sbjct: 268 HVDPHQRLTAKQVLQHPW 285
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 41/188 (21%)
Query: 502 AVAGAGLMNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPC-AGTKGFRAP 560
AVA +N DL L LT P+ +I + L K K GT + +P
Sbjct: 118 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSP 177
Query: 561 EVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHN 620
+VL GP+ D WSAGV + L+ G PF + + + K+
Sbjct: 178 QVL--EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEV--------------MLKIRE 221
Query: 621 RESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAE 680
+FPE D+L V P + L+ + LT +P+ RI++
Sbjct: 222 GTFTFPEK-----------------------DWLNVSPQAE-SLIRRLLTKSPKQRITSL 257
Query: 681 DALKHEFF 688
AL+HE+F
Sbjct: 258 QALEHEWF 265
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 32/182 (17%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN------ELRMLERFG 254
+ + +E G G +G V A +K GT I+ K++V + E+ +++
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQK--GT--RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 255 GKNFIIKYEGCFK-----------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCL 303
N I YE F+ C + F E V H R + +E D +++ +
Sbjct: 65 HPNIIRLYE-TFEDNTDIYLVMELCTGGELF--ERVVHKR---VFRESDAARIM---KDV 115
Query: 304 FRALASLHKQGIVHRDVKPGNFLFSCKAVKG--YLIDFNLAMVGFDGSFNQATLPGTKYV 361
A+A HK + HRD+KP NFLF + LIDF LA G + + YV
Sbjct: 116 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 175
Query: 362 PP 363
P
Sbjct: 176 SP 177
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKVVNHKN-IIGLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F S D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLA 342
RD+KP N + A ++DF LA
Sbjct: 150 RDLKPSNIVVKSDATLK-ILDFGLA 173
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP--EQNIKDIAKLR 607
P T+ +RAPEV+ ++ +DIWS GV + ++ G F G +Q K I +L
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL- 241
Query: 608 GSEDLWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLV 665
G+ + KL ++ E+ YA S + P+ L + ++ S DL+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKL-FPD--VLFPADSEHNKLKASQARDLL 298
Query: 666 DKCLTVNPRLRISAEDALKHEFFAPCHE 693
K L ++ RIS ++AL+H + ++
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYD 326
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEG 264
E G+G G V++ K G V+A K H A ++ + EL++L +I+ + G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP-YIVGFYG 71
Query: 265 CFKCGDSDCFVLEHVKHDR-PEVLKK--EIDLSQLQWYGYCLFRALASL-HKQGIVHRDV 320
F +EH+ +VLKK I L + + L L K I+HRDV
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 321 KPGNFLFSCK--------AVKGYLID-FNLAMVGFDGSFNQATLPGTKY 360
KP N L + + V G LID + VG + L GT Y
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 41/142 (28%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT+ + +PE L + H + DIWS G++L+ + +GR P P + K+
Sbjct: 164 VGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAVGRYPI---PPPDAKE--------- 210
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF-----DLVD 666
S PP+ + E I P +PS +F D V+
Sbjct: 211 ---------------------DSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVN 247
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
KCL NP R + + H F
Sbjct: 248 KCLIKNPAERADLKQLMVHAFI 269
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 48/198 (24%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGP----CAGTKGFRAPEVLFRSQHQG 570
DL I+LL K P+P + + + G + +DG GT F APE++ + G
Sbjct: 140 DLKPENIMLLDKNIPIPHIKL--IDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-NYEPLG 196
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLY 630
+ D+WS GV L+ G +PF GD +Q +A + F E+ +
Sbjct: 197 LEADMWSIGVITYILLSGASPFLGDTKQET--------------LANITAVSYDFDEEFF 242
Query: 631 AAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAP 690
+ S E K D + K L R R++ ++AL+H + P
Sbjct: 243 SQTS-------ELAK-----------------DFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 691 CHEMLRKQKLLRQGSSID 708
+Q ++R+ S ++
Sbjct: 279 VD---NQQAMVRRESVVN 293
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA---IKCPHANASKHYVSNE-----LRMLERFGGKNF 258
EE GSG + V + R K+ G A IK + AS+ VS E + +L + N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN- 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
+I ++ +LE V + + L ++ LS+ + + + + LH + I
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
H D+KP N + K + LIDF LA DG + ++V P
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 555 KGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN-IKDIAKLRGSEDLW 613
+ +RAPE++ + + +D+WSAG + + + F G N + I ++ G+ +
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 614 EVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNP 673
+V SS Y SL + W ++ P +L DL+ K L NP
Sbjct: 257 DVVMF----SSPSARDYLRNSLSNVPARAWTAVVPTAD------PVAL-DLIAKMLEFNP 305
Query: 674 RLRISAEDALKHEFF 688
+ RIS E AL+H +F
Sbjct: 306 QRRISTEQALRHPYF 320
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN-------------ELRM 249
+ V+ SG YG V A ++G VAIK S N E+R+
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 250 LERF------GGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE---IDLSQLQWYG 300
L F G ++ + +E V E ++ D +V+ + I +Q++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEE--PAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFM 140
Query: 301 YCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
Y + L LH+ G+VHRD+ PGN L + + DFNLA
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNN-DITICDFNLA 181
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 555 KGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN-IKDIAKLRGSEDLW 613
+ +RAPE++ + + +D+WSAG + + + F G N + I ++ G+ +
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 614 EVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNP 673
+V SS Y SL + W ++ P +L DL+ K L NP
Sbjct: 257 DVVMF----SSPSARDYLRNSLSNVPARAWTAVVPTAD------PVAL-DLIAKMLEFNP 305
Query: 674 RLRISAEDALKHEFF 688
+ RIS E AL+H +F
Sbjct: 306 QRRISTEQALRHPYF 320
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN-------------ELRM 249
+ V+ SG YG V A ++G VAIK S N E+R+
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 250 LERF------GGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE---IDLSQLQWYG 300
L F G ++ + +E V E ++ D +V+ + I +Q++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEE--PAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFM 140
Query: 301 YCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
Y + L LH+ G+VHRD+ PGN L + + DFNLA
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNN-DITICDFNLA 181
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 48/198 (24%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGP----CAGTKGFRAPEVLFRSQHQG 570
DL I+LL K P+P + + + G + +DG GT F APE++ + G
Sbjct: 140 DLKPENIMLLDKNIPIPHIKL--IDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-NYEPLG 196
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLY 630
+ D+WS GV L+ G +PF GD +Q +A + F E+ +
Sbjct: 197 LEADMWSIGVITYILLSGASPFLGDTKQET--------------LANITAVSYDFDEEFF 242
Query: 631 AAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAP 690
+ S E K D + K L R R++ ++AL+H + P
Sbjct: 243 SQTS-------ELAK-----------------DFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 691 CHEMLRKQKLLRQGSSID 708
+Q ++R+ S ++
Sbjct: 279 VDT---QQAMVRRESVVN 293
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 15/171 (8%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA---IKCPHANASK-----HYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A IK + AS+ + E+ +L + N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN- 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
II ++ +LE V + + L ++ LS+ + + + + LH + I
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
H D+KP N + K + LIDF LA DG + ++V P
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKVVNHKN-IIGLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F S D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLA 342
RD+KP N + A ++DF LA
Sbjct: 150 RDLKPSNIVVKSDATLK-ILDFGLA 173
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP--EQNIKDIAKLR 607
P T+ +RAPEV+ ++ +DIWS GV + ++ G F G +Q K I +L
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL- 241
Query: 608 GSEDLWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLV 665
G+ + KL ++ E+ YA S + P+ L + ++ S DL+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKL-FPD--VLFPADSEHNKLKASQARDLL 298
Query: 666 DKCLTVNPRLRISAEDALKHEFF 688
K L ++ RIS ++AL+H +
Sbjct: 299 SKMLVIDASKRISVDEALQHPYI 321
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCP--HANASKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G G G V A ++ G +VA+K + + NE+ ++ + +N + Y +
Sbjct: 160 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY-NSYL 218
Query: 268 CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCL--FRALASLHKQGIVHRDVKPGNF 325
GD V+E ++ + +++ Q CL +AL+ LH QG++HRD+K +
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 278
Query: 326 LFS 328
L +
Sbjct: 279 LLT 281
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 40/155 (25%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT + APE++ R + GP++DIWS G+ ++ ++ G P+F +P +K + +R
Sbjct: 308 VGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRD--- 361
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
NLP K + K + SL +D+ L
Sbjct: 362 ---------------------------NLPPRLKNLHK-------VSPSLKGFLDRLLVR 387
Query: 672 NPRLRISAEDALKHEFFAPCHEMLRKQKLLRQGSS 706
+P R +A + LKH F A L+RQ +
Sbjct: 388 DPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRT 422
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 16/178 (8%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G V AR K + A+K A + ++ +E +L + F++
Sbjct: 47 GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHF 106
Query: 265 CFKCGDSDCFVLEHVK------HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHR 318
F+ D FVL+++ H + E E + ++Y + AL LH IV+R
Sbjct: 107 SFQTADKLYFVLDYINGGELFYHLQRERCFLE---PRARFYAAEIASALGYLHSLNIVYR 163
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPPVNGRKVPSAKSL 375
D+KP N L + L DF L + + +T GT +Y+ P K P +++
Sbjct: 164 DLKPENILLDSQG-HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTV 220
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCP--HANASKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G G G V A ++ G +VA+K + + NE+ ++ + +N + Y +
Sbjct: 38 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY-NSYL 96
Query: 268 CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCL--FRALASLHKQGIVHRDVKPGNF 325
GD V+E ++ + +++ Q CL +AL+ LH QG++HRD+K +
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 156
Query: 326 LFS 328
L +
Sbjct: 157 LLT 159
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 40/138 (28%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT + APE++ R + GP++DIWS G+ ++ ++ G P+F +P +K + +R
Sbjct: 186 VGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRD--- 239
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
NLP K + K + SL +D+ L
Sbjct: 240 ---------------------------NLPPRLKNLHK-------VSPSLKGFLDRLLVR 265
Query: 672 NPRLRISAEDALKHEFFA 689
+P R +A + LKH F A
Sbjct: 266 DPAQRATAAELLKHPFLA 283
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFII 260
+ ++V+E G G Y R K A+K + SK S E+ +L R+G II
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKV--IDKSKRDPSEEIEILLRYGQHPNII 84
Query: 261 KYEGCFKCGDSDCFVLEHVKHDR--PEVLKKEI-DLSQLQWYGYCLFRALASLHKQGIVH 317
+ + G V E ++ ++L+++ + + + + + + LH QG+VH
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVH 144
Query: 318 RDVKPGNFLF 327
RD+KP N L+
Sbjct: 145 RDLKPSNILY 154
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 52/138 (37%), Gaps = 37/138 (26%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
PC T F APEVL R Q DIWS G+ L ++ G TPF P ++I GS
Sbjct: 185 PCY-TANFVAPEVLKR-QGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS 242
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
++ W + + DLV K L
Sbjct: 243 GKF------------------------TLSGGNW-----------NTVSETAKDLVSKML 267
Query: 670 TVNPRLRISAEDALKHEF 687
V+P R++A+ L+H +
Sbjct: 268 HVDPHQRLTAKQVLQHPW 285
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCP--HANASKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G G G V A ++ G +VA+K + + NE+ ++ + +N + Y +
Sbjct: 40 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY-NSYL 98
Query: 268 CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCL--FRALASLHKQGIVHRDVKPGNF 325
GD V+E ++ + +++ Q CL +AL+ LH QG++HRD+K +
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 158
Query: 326 LFS 328
L +
Sbjct: 159 LLT 161
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 40/138 (28%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT + APE++ R + GP++DIWS G+ ++ ++ G P+F +P +K + +R
Sbjct: 188 VGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRD--- 241
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
NLP K + K + SL +D+ L
Sbjct: 242 ---------------------------NLPPRLKNLHK-------VSPSLKGFLDRLLVR 267
Query: 672 NPRLRISAEDALKHEFFA 689
+P R +A + LKH F A
Sbjct: 268 DPAQRATAAELLKHPFLA 285
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERFG-GKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 13 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 72
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 73 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 128 NXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 178
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 155 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Query: 597 E 597
E
Sbjct: 215 E 215
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCP--HANASKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G G G V A ++ G +VA+K + + NE+ ++ + +N + Y +
Sbjct: 29 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY-NSYL 87
Query: 268 CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCL--FRALASLHKQGIVHRDVKPGNF 325
GD V+E ++ + +++ Q CL +AL+ LH QG++HRD+K +
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 147
Query: 326 LFS 328
L +
Sbjct: 148 LLT 150
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 40/138 (28%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT + APE++ R + GP++DIWS G+ ++ ++ G P+F +P +K + +R
Sbjct: 177 VGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIR---- 229
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
+LPP R L + SL +D+ L
Sbjct: 230 ---------------------DNLPP------------RLKNLHKVSPSLKGFLDRLLVR 256
Query: 672 NPRLRISAEDALKHEFFA 689
+P R +A + LKH F A
Sbjct: 257 DPAQRATAAELLKHPFLA 274
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 41/138 (29%)
Query: 551 CAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSE 610
AGT + APEV R K DIWSAGV + +L+ G PF G + ++
Sbjct: 186 AAGTALYMAPEVFKRDV--TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ--------- 234
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
+++++ E YA + P + P ++ DL+ + LT
Sbjct: 235 ----------QKATYKEPNYAVECRP-------------------LTPQAV-DLLKQMLT 264
Query: 671 VNPRLRISAEDALKHEFF 688
+P R SA L HE+F
Sbjct: 265 KDPERRPSAAQVLHHEWF 282
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 25/158 (15%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK---HYVSNELRMLERFGGKNFI 259
FI + + GSG +G V+ ++ G IK + + S+ + E+ +L+ N I
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN-I 82
Query: 260 IKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEID-------LSQLQWYGYC------LFRA 306
IK F+ + V+E + E+L++ + LS+ GY + A
Sbjct: 83 IKIFEVFEDYHNMYIVMETC--EGGELLERIVSAQARGKALSE----GYVAELMKQMMNA 136
Query: 307 LASLHKQGIVHRDVKPGNFLFSCKAVKG--YLIDFNLA 342
LA H Q +VH+D+KP N LF + +IDF LA
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
G+ + APEV+ + GP++D+WS G+ L +++GR PF
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF 208
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 11/174 (6%)
Query: 203 FIVEEEEGSGGYGTV-----YRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKN 257
+I+ E G G +G V Y+ ++K ++ + + V E+ L+ +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 258 FIIKYEGCFKCGDSDCFVLEHVKHDRPEVL--KKEIDLSQLQWYGYCLFRALASLHKQGI 315
IIK V+E+ + + + KK + + + + + A+ H+ I
Sbjct: 71 -IIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 316 VHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP--VNGR 367
VHRD+KP N L + + DF L+ + DG+F + + Y P +NG+
Sbjct: 130 VHRDLKPENLLLD-DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK 182
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 45/181 (24%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGP----CAGTKGFRAPEVLFRSQHQG 570
DL I+LL K P+P + + + G + +DG GT F APE++ + G
Sbjct: 140 DLKPENIMLLDKNIPIPHIKL--IDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-NYEPLG 196
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLY 630
+ D+WS GV L+ G +PF GD +Q +A + + F E+ +
Sbjct: 197 LEADMWSIGVITYILLSGASPFLGDTKQET--------------LANITSVSYDFDEEFF 242
Query: 631 AAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAP 690
+ S E K D + K L R R++ ++AL+H + P
Sbjct: 243 SHTS-------ELAK-----------------DFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 691 C 691
Sbjct: 279 V 279
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA---IKCPHANASKHYVSNE-----LRMLERFGGKNF 258
EE GSG + V + R K+ G A IK + AS+ VS E + +L + N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN- 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
+I ++ +LE V + + L ++ LS+ + + + + LH + I
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
H D+KP N + K + LIDF LA DG + ++V P
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKVVNHKN-IIGLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F S D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
RD+KP N + A ++DF LA SF T+Y
Sbjct: 150 RDLKPSNIVVKSDATLK-ILDFGLARTA-GTSFMMTPYVVTRY 190
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP--EQNIKDIAKLR 607
P T+ +RAPEV+ ++ +DIWS G + ++ G F G +Q K I +L
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL- 241
Query: 608 GSEDLWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLV 665
G+ + KL ++ E+ YA S + P+ L + ++ S DL+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKL-FPD--VLFPADSEHNKLKASQARDLL 298
Query: 666 DKCLTVNPRLRISAEDALKHEFF 688
K L ++ RIS ++AL+H +
Sbjct: 299 SKMLVIDASKRISVDEALQHPYI 321
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 56/141 (39%), Gaps = 40/141 (28%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIA 604
QKK GT + APEVL + + K D+WS GV L L+ G PF G +Q I
Sbjct: 192 QKKMKERLGTAYYIAPEVLRKKYDE--KCDVWSIGVILFILLAGYPPFGGQTDQEI---- 245
Query: 605 KLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDL 664
LR E K + PEW + + DL
Sbjct: 246 -LRKVE----------------------KGKYTFDSPEW-----------KNVSEGAKDL 271
Query: 665 VDKCLTVNPRLRISAEDALKH 685
+ + L + + RISA+ AL+H
Sbjct: 272 IKQMLQFDSQRRISAQQALEH 292
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 70/179 (39%), Gaps = 32/179 (17%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPH----ANASKHYVSNELRMLERFGGKNFIIKYE-- 263
GSG YG V R K AIK + +S + E+ +L+ N + Y+
Sbjct: 46 GSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF 105
Query: 264 ----------GCFKCGDSDCFVLEHVKHDRPE--VLKKEIDLSQLQWYGYCLFRALASLH 311
C+K G+ ++ +K + + V+ K++ + LH
Sbjct: 106 EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV------------LSGVTYLH 153
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGY--LIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRK 368
K IVHRD+KP N L K ++DF L+ V + + L Y+ P RK
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK 212
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 45 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 104
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 105 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 210
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 187 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 597 E 597
E
Sbjct: 247 E 247
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCP--HANASKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G G G V A ++ G +VA+K + + NE+ ++ + +N + Y +
Sbjct: 33 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY-NSYL 91
Query: 268 CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCL--FRALASLHKQGIVHRDVKPGNF 325
GD V+E ++ + +++ Q CL +AL+ LH QG++HRD+K +
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 151
Query: 326 LFS 328
L +
Sbjct: 152 LLT 154
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 40/138 (28%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT + APE++ R + GP++DIWS G+ ++ ++ G P+F +P +K + +R
Sbjct: 181 VGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIR---- 233
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
+LPP R L + SL +D+ L
Sbjct: 234 ---------------------DNLPP------------RLKNLHKVSPSLKGFLDRLLVR 260
Query: 672 NPRLRISAEDALKHEFFA 689
+P R +A + LKH F A
Sbjct: 261 DPAQRATAAELLKHPFLA 278
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 60 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 119
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 120 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 225
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 202 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
Query: 597 E 597
E
Sbjct: 262 E 262
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 46 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 105
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 106 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 211
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 188 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 597 E 597
E
Sbjct: 248 E 248
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 19/181 (10%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQ-----WYGYCLFRALAS 309
N I++ G F +LE+ R EV K+ LS+ Y L AL+
Sbjct: 72 HPN-ILRLYGYFHDATRVYLILEYA--PRGEVYKELQKLSKFDEQRTATYITELANALSY 128
Query: 310 LHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNG 366
H + ++HRD+KP N L A + + DF ++ S + L GT Y+PP + G
Sbjct: 129 CHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRXXLXGTLDYLPPEMIEG 185
Query: 367 R 367
R
Sbjct: 186 R 186
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 173 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 35/159 (22%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCG 269
GSGG+G V++A+ + DG IK N K E++ L + N I+ Y GC+
Sbjct: 20 GSGGFGQVFKAKHRIDGKTYVIKRVKYNNEK--AEREVKALAKLDHVN-IVHYNGCWDGF 76
Query: 270 DSD--------------CFVL-----------EHVKHDRPEVLKKEIDLSQLQWYGYCLF 304
D D C + + ++ R E L K + L + +
Sbjct: 77 DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE----QIT 132
Query: 305 RALASLHKQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLA 342
+ + +H + +++RD+KP N FL K VK + DF L
Sbjct: 133 KGVDYIHSKKLINRDLKPSNIFLVDTKQVK--IGDFGLV 169
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 45 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 104
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 105 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 210
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 187 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 597 E 597
E
Sbjct: 247 E 247
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 45 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 104
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 105 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 210
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 187 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 597 E 597
E
Sbjct: 247 E 247
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 46 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 105
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 106 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 211
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 188 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 597 E 597
E
Sbjct: 248 E 248
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 46 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 105
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 106 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 211
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 188 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 597 E 597
E
Sbjct: 248 E 248
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF-------GG 255
F V G GG+G VY R+ + G + A+KC K L + ER G
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 256 KNFIIKYEGCFKCGDSDCFVLE-------HVKHDRPEVLKKEIDLSQLQWYGYCLFRALA 308
FI+ F D F+L+ H + V + + +++Y + L
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE----ADMRFYAAEIILGLE 306
Query: 309 SLHKQGIVHRDVKPGNFLF 327
+H + +V+RD+KP N L
Sbjct: 307 HMHNRFVVYRDLKPANILL 325
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+KK GT G+ APEVL + D +S G L L+ G +PF
Sbjct: 344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF-------GG 255
F V G GG+G VY R+ + G + A+KC K L + ER G
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 256 KNFIIKYEGCFKCGDSDCFVLE-------HVKHDRPEVLKKEIDLSQLQWYGYCLFRALA 308
FI+ F D F+L+ H + V + + +++Y + L
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE----ADMRFYAAEIILGLE 306
Query: 309 SLHKQGIVHRDVKPGNFLF 327
+H + +V+RD+KP N L
Sbjct: 307 HMHNRFVVYRDLKPANILL 325
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+KK GT G+ APEVL + D +S G L L+ G +PF
Sbjct: 344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 46 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 105
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 106 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 211
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 188 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
Query: 597 E 597
E
Sbjct: 248 E 248
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 18 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 77
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 78 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 183
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 160 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
Query: 597 E 597
E
Sbjct: 220 E 220
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 45 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 104
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 105 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 210
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 187 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
Query: 597 E 597
E
Sbjct: 247 E 247
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 18 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 77
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 78 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 183
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 160 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
Query: 597 E 597
E
Sbjct: 220 E 220
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF-------GG 255
F V G GG+G VY R+ + G + A+KC K L + ER G
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 256 KNFIIKYEGCFKCGDSDCFVLE-------HVKHDRPEVLKKEIDLSQLQWYGYCLFRALA 308
FI+ F D F+L+ H + V + + +++Y + L
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE----ADMRFYAAEIILGLE 305
Query: 309 SLHKQGIVHRDVKPGNFLF 327
+H + +V+RD+KP N L
Sbjct: 306 HMHNRFVVYRDLKPANILL 324
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+KK GT G+ APEVL + D +S G L L+ G +PF
Sbjct: 343 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 16/154 (10%)
Query: 199 NFESFIVEEEEGSGGYGTVYRAR-RKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKN 257
+++ VEE G G +G V +A+ R D VAIK + + + ELR L R N
Sbjct: 7 DYKEIEVEEVVGRGAFGVVCKAKWRAKD---VAIKQIESESERKAFIVELRQLSRVNHPN 63
Query: 258 FIIKYEGCFKCGDSDCFVLEHVKHDR-------PEVLKKEIDLSQLQWYGYCL--FRALA 308
+ Y C + C V+E+ + E L + W C L
Sbjct: 64 IVKLYGACL---NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 309 SLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
S+ + ++HRD+KP N L + DF A
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 32 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 91
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 92 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 197
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE 597
GT+ + PE + ++ G +WS G+ L ++ G PF D E
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 234
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 65 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 124
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 125 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 179
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 180 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 230
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE 597
GT+ + PE + ++ G +WS G+ L ++ G PF D E
Sbjct: 223 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 267
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF-------GG 255
F V G GG+G VY R+ + G + A+KC K L + ER G
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 256 KNFIIKYEGCFKCGDSDCFVLE-------HVKHDRPEVLKKEIDLSQLQWYGYCLFRALA 308
FI+ F D F+L+ H + V + + +++Y + L
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE----ADMRFYAAEIILGLE 306
Query: 309 SLHKQGIVHRDVKPGNFLF 327
+H + +V+RD+KP N L
Sbjct: 307 HMHNRFVVYRDLKPANILL 325
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+KK GT G+ APEVL + D +S G L L+ G +PF
Sbjct: 344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 32 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 91
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 92 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 197
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE 597
GT+ + PE + ++ G +WS G+ L ++ G PF D E
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 234
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCP--HANASKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G G G V A ++ G +VA+K + + NE+ ++ + +N + Y +
Sbjct: 83 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY-NSYL 141
Query: 268 CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCL--FRALASLHKQGIVHRDVKPGNF 325
GD V+E ++ + +++ Q CL +AL+ LH QG++HRD+K +
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 201
Query: 326 LFS 328
L +
Sbjct: 202 LLT 204
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 40/138 (28%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT + APE++ R + GP++DIWS G+ ++ ++ G P+F +P +K + +R
Sbjct: 231 VGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRD--- 284
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
NLP K + K + SL +D+ L
Sbjct: 285 ---------------------------NLPPRLKNLHK-------VSPSLKGFLDRLLVR 310
Query: 672 NPRLRISAEDALKHEFFA 689
+P R +A + LKH F A
Sbjct: 311 DPAQRATAAELLKHPFLA 328
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 17 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 76
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 77 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 182
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 159 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 218
Query: 597 E 597
E
Sbjct: 219 E 219
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 33 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 92
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 93 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 198
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE 597
GT+ + PE + ++ G +WS G+ L ++ G PF D E
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 33 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 92
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 93 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 198
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE 597
GT+ + PE + ++ G +WS G+ L ++ G PF D E
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 33 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 92
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 93 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 198
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE 597
GT+ + PE + ++ G +WS G+ L ++ G PF D E
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 21/139 (15%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN-IKDIAKLRG---S 609
T +RAP+VL S+ +DIWS G ++ G F G E + + I ++ G S
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNS 222
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
++ V +L + +F + LP W FL+ + S DL+ K L
Sbjct: 223 KNWPNVTELPKYDPNFT----VYEPLP------W-------ESFLKGLDESGIDLLSKML 265
Query: 670 TVNPRLRISAEDALKHEFF 688
++P RI+A+ AL+H +F
Sbjct: 266 KLDPNQRITAKQALEHAYF 284
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGKNFIIKY 262
E+ G G YG VY+A+ N G A+K + + E+ +L+ N I+K
Sbjct: 8 EKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN-IVKL 65
Query: 263 EGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQ-------LQWYGYCLFRALASLHKQGI 315
V EH+ D LKK +D+ + + + L +A H + +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQD----LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 316 VHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+HRD+KP N L + + + + DF LA
Sbjct: 122 LHRDLKPQNLLINREG-ELKIADFGLA 147
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 60 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 119
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 120 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 225
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 202 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
Query: 597 E 597
E
Sbjct: 262 E 262
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 555 KGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF-FGDPEQNIKDIAKLRGSEDLW 613
+ +RAPEV+ P D+WS G L+ +G T F D ++++ + ++ G
Sbjct: 198 RHYRAPEVILALGWSQP-CDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKH 256
Query: 614 EVAKLHNRESSFPEDL-YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
+ K R+ + L + S + CK + + +V LFDL+ K L +
Sbjct: 257 MIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYD 316
Query: 673 PRLRISAEDALKHEFF 688
P RI+ +ALKH FF
Sbjct: 317 PAKRITLREALKHPFF 332
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 52 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 111
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 112 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 217
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE 597
GT+ + PE + ++ G +WS G+ L ++ G PF D E
Sbjct: 210 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 254
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 16/154 (10%)
Query: 199 NFESFIVEEEEGSGGYGTVYRAR-RKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKN 257
+++ VEE G G +G V +A+ R D VAIK + + + ELR L R N
Sbjct: 6 DYKEIEVEEVVGRGAFGVVCKAKWRAKD---VAIKQIESESERKAFIVELRQLSRVNHPN 62
Query: 258 FIIKYEGCFKCGDSDCFVLEHVKHDR-------PEVLKKEIDLSQLQWYGYCL--FRALA 308
+ Y C + C V+E+ + E L + W C L
Sbjct: 63 IVKLYGACL---NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 309 SLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
S+ + ++HRD+KP N L + DF A
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 46/140 (32%)
Query: 551 CAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK--LRG 608
C G+ + APE++ + G + D+WS G+ L LM G PF D N+ + K +RG
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD---NVMALYKKIMRG 225
Query: 609 SEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
D +P+W + PSS+ L+ +
Sbjct: 226 KYD----------------------------VPKW------------LSPSSIL-LLQQM 244
Query: 669 LTVNPRLRISAEDALKHEFF 688
L V+P+ RIS ++ L H +
Sbjct: 245 LQVDPKKRISMKNLLNHPWI 264
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 22/156 (14%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGK 256
+ + + E G+GG+ V A G +VAIK N + + E+ L+ +
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 257 NFIIKYEGCFKCGDSDCFVLEH----------VKHDRPEVLKKEIDLSQLQWYGYCLFRA 306
+ Y + + VLE+ + DR + + Q+ A
Sbjct: 69 HICQLYH-VLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQI-------VSA 120
Query: 307 LASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+A +H QG HRD+KP N LF + K LIDF L
Sbjct: 121 VAYVHSQGYAHRDLKPENLLFD-EYHKLKLIDFGLC 155
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 21/152 (13%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGR-------------TPFFGDP 596
P T +RAPE+L ++H +DIW+ G L+ P+ D
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253
Query: 597 EQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEV 656
I ++ +D WE K S+ +D + + +L ++ + +PD
Sbjct: 254 LDRIFNVMGFPADKD-WEDIKKMPEHSTLMKD-FRRNTYTNCSLIKYMEKHKVKPD---- 307
Query: 657 IPSSLFDLVDKCLTVNPRLRISAEDALKHEFF 688
S F L+ K LT++P RI++E A++ +F
Sbjct: 308 --SKAFHLLQKLLTMDPIKRITSEQAMQDPYF 337
Score = 29.6 bits (65), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 75/188 (39%), Gaps = 16/188 (8%)
Query: 210 GSGGYGTVYRARRKNDGTV--VAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G G YG VY+A+RK+ A+K E+ +L N I +
Sbjct: 30 GRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLS 89
Query: 268 CGDSDCFVL-EHVKHDRPEVLK---------KEIDLSQ--LQWYGYCLFRALASLHKQGI 315
D ++L ++ +HD ++K K + L + ++ Y + + LH +
Sbjct: 90 HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWV 149
Query: 316 VHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSL 375
+HRD+KP N L + + + +A +GF FN P P V + + L
Sbjct: 150 LHRDLKPANILVMGEGPERGRV--KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL 207
Query: 376 VAVKQDTR 383
+ + T+
Sbjct: 208 LGARHYTK 215
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA---SKHYVSNELRMLERFGGKNFIIKYEGCF 266
G+G + V A K +VAIKC A + + NE+ +L + N I+ + +
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN-IVALDDIY 85
Query: 267 KCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDV 320
+ G +++ V DR + E D S+L + + A+ LH GIVHRD+
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI---FQVLDAVKYLHDLGIVHRDL 142
Query: 321 KPGNFLFSC--KAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSL 375
KP N L+ + K + DF L+ + GS YV P + P +K++
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF 593
GT G+ APEVL + + +D WS GV L+ G PF+
Sbjct: 180 GTPGYVAPEVLAQKPY-SKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA---SKHYVSNELRMLERFGGKNFIIKYEGCF 266
G+G + V A K +VAIKC A + + NE+ +L + N I+ + +
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN-IVALDDIY 85
Query: 267 KCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDV 320
+ G +++ V DR + E D S+L + + A+ LH GIVHRD+
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI---FQVLDAVKYLHDLGIVHRDL 142
Query: 321 KPGNFLFSC--KAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSL 375
KP N L+ + K + DF L+ + GS YV P + P +K++
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF 593
GT G+ APEVL + + +D WS GV L+ G PF+
Sbjct: 180 GTPGYVAPEVLAQKPY-SKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 18 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 77
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 78 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 183
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 160 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
Query: 597 E 597
E
Sbjct: 220 E 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK---CPHANASKHYVSNELRMLERFGGKNFIIKYE--- 263
G GG G V+ A + VAIK + KH + E++++ R N + +E
Sbjct: 20 GCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHAL-REIKIIRRLDHDNIVKVFEILG 78
Query: 264 ----------GCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQ-LQWYGYCLFRALASLHK 312
G +S V E+++ D VL++ L + + + Y L R L +H
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138
Query: 313 QGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
++HRD+KP N + + + + DF LA +
Sbjct: 139 ANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLW 613
TK +R+P +L + +D+W+AG ++ G+T F G E + L
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI-------LE 239
Query: 614 EVAKLHNRESSFPEDLYAAKSLPPI----NLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
+ +H ED S+ P+ ++ E K +T+ L I D +++ L
Sbjct: 240 SIPVVHE------EDRQELLSVIPVYIRNDMTEPHKPLTQ---LLPGISREAVDFLEQIL 290
Query: 670 TVNPRLRISAEDALKHEFFA 689
T +P R++AE+AL H + +
Sbjct: 291 TFSPMDRLTAEEALSHPYMS 310
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 193 NAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELR 248
N KV N+E ++ G G YG VY A KN VAIK + + E+
Sbjct: 23 NVKVPDNYE---IKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREIT 79
Query: 249 MLERFGGKNFIIKYEGCFKCGDSDCF-----VLEHVKHDRPEVLKKEIDLSQ--LQWYGY 301
+L R ++II+ D F VLE D ++ K I L++ ++ Y
Sbjct: 80 ILNRLKS-DYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILY 138
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFS--CKAVKGYLIDFNLA 342
L +H+ GI+HRD+KP N L + C +VK + DF LA
Sbjct: 139 NLLLGEKFIHESGIIHRDLKPANCLLNQDC-SVK--ICDFGLA 178
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 27/157 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVT---LLYLM-------IGRTPFFG-------DP 596
T+ +RAPE++ ++ +DIWS G LL +M R P F P
Sbjct: 219 TRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSP 278
Query: 597 EQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDF--- 653
+ N K + + + + D ++ + N + PE+ K + + ++ KL R
Sbjct: 279 DHNSKKVHE-KSNRD--QLNIIFNVIGTPPEE--DLKCITKQEVIKYIKLFPTRDGIDLS 333
Query: 654 --LEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFF 688
I DL++ L N + RI+ + AL H +
Sbjct: 334 KKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYL 370
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGK 256
+++I++ G G YG VY A KN VAIK + + E+ +L R
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 257 NFIIKYEGCFKCG----DSDCFVLEHVKHDRPEVLKKEIDLSQ--LQWYGYCLFRALASL 310
I Y+ D VLE D ++ K I L++ ++ Y L +
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 311 HKQGIVHRDVKPGNFLFS--CKAVKGYLIDFNLA 342
H+ GI+HRD+KP N L + C +VK + DF LA
Sbjct: 146 HESGIIHRDLKPANCLLNQDC-SVK--VCDFGLA 176
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 37/172 (21%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLM----------IGRTPFFG-------DP 596
T+ +RAPE++ ++ +DIWS G L+ R P F P
Sbjct: 214 TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSP 273
Query: 597 EQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLIT----KRPD 652
++N K + + + + D ++ + N + ED L IN PE K I ++P
Sbjct: 274 DRNSKKVHE-KSNRD--QLNIIFNIIGTPTED-----DLKNINKPEVIKYIKLFPHRKPI 325
Query: 653 FLEVIPSSLFD----LVDKCLTVNPRLRISAEDALKHEFFAPCHEMLRKQKL 700
L+ S+ D L++ L NP RI+ + AL H P + +RK+KL
Sbjct: 326 NLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDH----PYLKDVRKKKL 373
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCP--HANASKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G G G V A K+ G VA+K + + NE+ ++ + N + Y +
Sbjct: 54 GEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS-YL 112
Query: 268 CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCL--FRALASLHKQGIVHRDVKPGNF 325
GD V+E ++ + +++ Q CL RAL+ LH QG++HRD+K +
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSI 172
Query: 326 LFS 328
L +
Sbjct: 173 LLT 175
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
GT + APEV+ R + G ++DIWS G+ ++ ++ G P+F +P
Sbjct: 202 VGTPYWMAPEVISRLPY-GTEVDIWSLGIMVIEMIDGEPPYFNEP 245
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 40 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 99
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 100 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 154
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 155 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 205
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 182 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 241
Query: 597 E 597
E
Sbjct: 242 E 242
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 16 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 75
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 76 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 131 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 181
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 158 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 217
Query: 597 E 597
E
Sbjct: 218 E 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA---SKHYVSNELRMLERFGGKNFIIKYEGCF 266
G+G + V A K +VAIKC A + + NE+ +L + N I+ + +
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN-IVALDDIY 85
Query: 267 KCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDV 320
+ G +++ V DR + E D S+L + + A+ LH GIVHRD+
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI---FQVLDAVKYLHDLGIVHRDL 142
Query: 321 KPGNFLFSC--KAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSL 375
KP N L+ + K + DF L+ + GS YV P + P +K++
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF 593
GT G+ APEVL + + +D WS GV L+ G PF+
Sbjct: 180 GTPGYVAPEVLAQKPY-SKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEG 264
E G+G G V++ K G V+A K H A ++ + EL++L +I+ + G
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP-YIVGFYG 90
Query: 265 CFKCGDSDCFVLEHVKHDR-PEVLKK--EIDLSQLQWYGYCLFRALASL-HKQGIVHRDV 320
F +EH+ +VLKK I L + + L L K I+HRDV
Sbjct: 91 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 150
Query: 321 KPGNFLFSCK--------AVKGYLID-FNLAMVGFDGSFNQATLPGTKY 360
KP N L + + V G LID + VG + L GT Y
Sbjct: 151 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 199
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 37/137 (27%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT+ + +PE L + H + DIWS G++L+ + +GR P I GS
Sbjct: 183 VGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAVGRYP-----------IGSGSGSMA 230
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
++E+ E PP LP V D V+KCL
Sbjct: 231 IFELLDYIVNE-------------PPPKLPSG------------VFSLEFQDFVNKCLIK 265
Query: 672 NPRLRISAEDALKHEFF 688
NP R + + H F
Sbjct: 266 NPAERADLKQLMVHAFI 282
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 70/169 (41%), Gaps = 17/169 (10%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEG 264
E G+G G V++ K G V+A K H A ++ + EL++L +I+ + G
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP-YIVGFYG 74
Query: 265 CFKCGDSDCFVLEHVKHDR-PEVLKK--EIDLSQLQWYGYCLFRALASL-HKQGIVHRDV 320
F +EH+ +VLKK I L + + L L K I+HRDV
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 134
Query: 321 KPGNFLFSCK--------AVKGYLID-FNLAMVGFDGSFNQATLPGTKY 360
KP N L + + V G LID VG + L GT Y
Sbjct: 135 KPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHY 183
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 51/142 (35%), Gaps = 51/142 (35%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT+ + +PE L + H + DIWS G++L+ + +GR P
Sbjct: 167 VGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAVGRYP-------------------- 205
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF-----DLVD 666
PP+ + E I P +PS++F D V+
Sbjct: 206 -----------------------RPPMAIFELLDYIVNEPP--PKLPSAVFSLEFQDFVN 240
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
KCL NP R + + H F
Sbjct: 241 KCLIKNPAERADLKQLMVHAFI 262
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA---SKHYVSNELRMLERFGGKNFIIKYEGCF 266
G+G + V A K +VAIKC A + + NE+ +L + N I+ + +
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN-IVALDDIY 85
Query: 267 KCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDV 320
+ G +++ V DR + E D S+L + + A+ LH GIVHRD+
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI---FQVLDAVKYLHDLGIVHRDL 142
Query: 321 KPGNFLFSC--KAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSL 375
KP N L+ + K + DF L+ + GS YV P + P +K++
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF 593
GT G+ APEVL + + +D WS GV L+ G PF+
Sbjct: 180 GTPGYVAPEVLAQKPYS-KAVDCWSIGVIAYILLCGYPPFY 219
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKVVNHKN-IIGLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F S D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLA 342
RD+KP N + A ++DF LA
Sbjct: 150 RDLKPSNIVVKSDATLK-ILDFGLA 173
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRG 608
P T+ +RAPEV+ ++ +DIWS G + ++ G F G D + + G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 609 SEDLWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD 666
+ + KL ++ E+ YA S + P+ L + ++ S DL+
Sbjct: 243 TPSPEFMKKLQPTVRTYVENRPKYAGYSFEKL-FPD--VLFPADSEHNKLKASQARDLLS 299
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
K L ++ RIS ++AL+H +
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC-----PHANASKHYVSNELRMLERFG 254
E F + G G +G VY AR KN ++A+K +H + E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 67 HPN-ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S +A L GT Y+PP + GR
Sbjct: 125 HSKKVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRAALCGTLDYLPPEMIEGR 181
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN 599
GT + PE++ H K+D+WS GV ++G+ PF + Q+
Sbjct: 168 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQD 213
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 13 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 72
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 73 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 178
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 155 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Query: 597 E 597
E
Sbjct: 215 E 215
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 13 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 72
Query: 261 KYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ-----WYGYCLFRALASLH 311
+ F+ DS +LE RPE ++ D LQ + + + A+ H
Sbjct: 73 RLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
G++HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 178
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 155 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Query: 597 E 597
E
Sbjct: 215 E 215
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 288 KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA--MVG 345
KK ID + + Y + A+ ++H+ GIVH D+KP NFL +K LIDF +A M
Sbjct: 149 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIANQMQP 206
Query: 346 FDGSFNQATLPGT-KYVPPVNGRKVPSAK 373
S + + GT Y+PP + + S++
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 50/127 (39%), Gaps = 43/127 (33%)
Query: 574 DIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAK 633
D+WS G L Y+ G+TPF +Q I I+KL D N E FP+
Sbjct: 249 DVWSLGCILYYMTYGKTPF----QQIINQISKLHAIID-------PNHEIEFPD------ 291
Query: 634 SLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFA---- 689
+PE L D++ CL +P+ RIS + L H +
Sbjct: 292 ------IPE----------------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329
Query: 690 PCHEMLR 696
P ++M +
Sbjct: 330 PVNQMAK 336
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 25/136 (18%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKH---YVS-----------NELRMLERF 253
E G G +G VY+A+ K + A K + + Y+ N +++L+ F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 254 GGKN-FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHK 312
+N I E C G D +LE L++ + SQ+Q AL LH
Sbjct: 104 YYENNLWILIEFC-AGGAVDAVMLE---------LERPLTESQIQVVCKQTLDALNYLHD 153
Query: 313 QGIVHRDVKPGNFLFS 328
I+HRD+K GN LF+
Sbjct: 154 NKIIHRDLKAGNILFT 169
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVA---IKCPHANASKHYVSNELRMLERFGGK 256
++ + + EE GSG +G V+R K G V I P+ K+ V NE+ ++ +
Sbjct: 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHP 108
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASLHK 312
+I F+ +LE + DR ++ +++ Y L +H+
Sbjct: 109 K-LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 313 QGIVHRDVKPGNFLFSCKAVKGY-LIDFNLA 342
IVH D+KP N + K +IDF LA
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLA 198
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 39/145 (26%)
Query: 551 CAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSE 610
T F APE++ R + G D+W+ GV L+ G +PF G E +++ + ++ +
Sbjct: 210 TTATAEFAAPEIVDR-EPVGFYTDMWAIGVLGYVLLSGLSPFAG--EDDLETLQNVKRCD 266
Query: 611 DLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT 670
WE F ED +++ S PE D + L
Sbjct: 267 --WE----------FDEDAFSSVS------PE------------------AKDFIKNLLQ 290
Query: 671 VNPRLRISAEDALKHEFFAPCHEML 695
PR R++ DAL+H + H L
Sbjct: 291 KEPRKRLTVHDALEHPWLKGDHSNL 315
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 25/136 (18%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKH---YVS-----------NELRMLERF 253
E G G +G VY+A+ K + A K + + Y+ N +++L+ F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 254 GGKN-FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHK 312
+N I E C G D +LE L++ + SQ+Q AL LH
Sbjct: 104 YYENNLWILIEFC-AGGAVDAVMLE---------LERPLTESQIQVVCKQTLDALNYLHD 153
Query: 313 QGIVHRDVKPGNFLFS 328
I+HRD+K GN LF+
Sbjct: 154 NKIIHRDLKAGNILFT 169
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 93 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + TL GT Y+PP + GR
Sbjct: 151 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMIEGR 207
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 194 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 25/136 (18%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKH---YVS-----------NELRMLERF 253
E G G +G VY+A+ K + A K + + Y+ N +++L+ F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 254 GGKN-FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHK 312
+N I E C G D +LE L++ + SQ+Q AL LH
Sbjct: 104 YYENNLWILIEFC-AGGAVDAVMLE---------LERPLTESQIQVVCKQTLDALNYLHD 153
Query: 313 QGIVHRDVKPGNFLFS 328
I+HRD+K GN LF+
Sbjct: 154 NKIIHRDLKAGNILFT 169
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 288 KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA--MVG 345
KK ID + + Y + A+ ++H+ GIVH D+KP NFL +K LIDF +A M
Sbjct: 149 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIANQMQP 206
Query: 346 FDGSFNQATLPGT-KYVPPVNGRKVPSAK 373
S + + GT Y+PP + + S++
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 50/127 (39%), Gaps = 43/127 (33%)
Query: 574 DIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAK 633
D+WS G L Y+ G+TPF +Q I I+KL D N E FP+
Sbjct: 249 DVWSLGCILYYMTYGKTPF----QQIINQISKLHAIID-------PNHEIEFPD------ 291
Query: 634 SLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFA---- 689
+PE L D++ CL +P+ RIS + L H +
Sbjct: 292 ------IPE----------------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329
Query: 690 PCHEMLR 696
P ++M +
Sbjct: 330 PVNQMAK 336
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 539 LLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
++ +G+ +D G+ + APEV+ + GP++DIWS GV L L+ G PF D E
Sbjct: 160 MMSDGEFLRDS--CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF--DDEH 215
Query: 599 NIKDIAKLRGS 609
K+RG
Sbjct: 216 VPTLFKKIRGG 226
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 28/183 (15%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHY-----VSNELRMLERFGGKN 257
+++ + G G +G V + G VA+K + + + E++ L+ F +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 258 FIIKYEGCFKCGDSDCF-VLEHV----------KHDRPEVLKKEIDLSQLQWYGYCLFRA 306
I Y+ +D F V+E+V KH R E ++ Q+ A
Sbjct: 73 IIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI-------LSA 123
Query: 307 LASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP--V 364
+ H+ +VHRD+KP N L + + DF L+ + DG F + + Y P +
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAH-MNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVI 182
Query: 365 NGR 367
+GR
Sbjct: 183 SGR 185
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 288 KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
KK ID + + Y + A+ ++H+ GIVH D+KP NFL +K LIDF +A
Sbjct: 149 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIA 201
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 50/127 (39%), Gaps = 43/127 (33%)
Query: 574 DIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAK 633
D+WS G L Y+ G+TPF +Q I I+KL D N E FP+
Sbjct: 249 DVWSLGCILYYMTYGKTPF----QQIINQISKLHAIID-------PNHEIEFPD------ 291
Query: 634 SLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFA---- 689
+PE L D++ CL +P+ RIS + L H +
Sbjct: 292 ------IPE----------------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329
Query: 690 PCHEMLR 696
P ++M +
Sbjct: 330 PVNQMAK 336
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
K D C G + APE+ ++ GP++D+WS GV L L+ G PF G QN+K++ +
Sbjct: 168 KLDAFC-GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---QNLKELRE 223
Query: 606 --LRG 608
LRG
Sbjct: 224 RVLRG 228
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
K D C G + APE+ ++ GP++D+WS GV L L+ G PF G QN+K++ +
Sbjct: 168 KLDAFC-GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---QNLKELRE 223
Query: 606 --LRG 608
LRG
Sbjct: 224 RVLRG 228
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKN-IIGLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F S D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
RD+KP N + A ++DF LA SF T+Y
Sbjct: 150 RDLKPSNIVVKSDATLK-ILDFGLARTA-GTSFMMTPYVVTRY 190
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRG 608
P T+ +RAPEV+ ++ +DIWS G + ++ G F G D + + G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 609 SEDLWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD 666
+ + KL ++ E+ YA S + P+ L + ++ S DL+
Sbjct: 243 TPSPEFMKKLQPTVRTYVENRPKYAGYSFEKL-FPD--VLFPADSEHNKLKASQARDLLS 299
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
K L ++ RIS ++AL+H +
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKXVNHKN-IISLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F + D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
RD+KP N + ++DF LA SF T+Y
Sbjct: 150 RDLKPSNIVVKSDXTLK-ILDFGLARTA-GTSFMMTPYVVTRY 190
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 230
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 231 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 282
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 288 KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA--MVG 345
KK ID + + Y + A+ ++H+ GIVH D+KP NFL +K LIDF +A M
Sbjct: 121 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIANQMQP 178
Query: 346 FDGSFNQATLPGT-KYVPPVNGRKVPSAK 373
S + + GT Y+PP + + S++
Sbjct: 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSR 207
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 39/114 (34%)
Query: 574 DIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAK 633
D+WS G L Y+ G+TPF +Q I I+KL D N E FP+
Sbjct: 221 DVWSLGCILYYMTYGKTPF----QQIINQISKLHAIID-------PNHEIEFPD------ 263
Query: 634 SLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEF 687
+PE L D++ CL +P+ RIS + L H +
Sbjct: 264 ------IPE----------------KDLQDVLKCCLKRDPKQRISIPELLAHPY 295
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
K D C G + APE+ ++ GP++D+WS GV L L+ G PF G QN+K++ +
Sbjct: 169 KLDAFC-GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---QNLKELRE 224
Query: 606 --LRG 608
LRG
Sbjct: 225 RVLRG 229
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
K D C G+ + APE+ ++ GP++D+WS GV L L+ G PF G QN+K++ +
Sbjct: 168 KLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---QNLKELRE 223
Query: 606 --LRG 608
LRG
Sbjct: 224 RVLRG 228
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
K D C G+ + APE+ ++ GP++D+WS GV L L+ G PF G QN+K++ +
Sbjct: 168 KLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---QNLKELRE 223
Query: 606 --LRG 608
LRG
Sbjct: 224 RVLRG 228
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
K D C G+ + APE+ ++ GP++D+WS GV L L+ G PF G QN+K++ +
Sbjct: 168 KLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---QNLKELRE 223
Query: 606 --LRG 608
LRG
Sbjct: 224 RVLRG 228
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
K D C G+ + APE+ ++ GP++D+WS GV L L+ G PF G QN+K++ +
Sbjct: 169 KLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---QNLKELRE 224
Query: 606 --LRG 608
LRG
Sbjct: 225 RVLRG 229
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 288 KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA--MVG 345
KK ID + + Y + A+ ++H+ GIVH D+KP NFL +K LIDF +A M
Sbjct: 102 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIANQMQP 159
Query: 346 FDGSFNQATLPGT-KYVPPVNGRKVPSAK 373
S + + GT Y+PP + + S++
Sbjct: 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSR 188
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 39/114 (34%)
Query: 574 DIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAK 633
D+WS G L Y+ G+TPF +Q I I+KL D N E FP+
Sbjct: 202 DVWSLGCILYYMTYGKTPF----QQIINQISKLHAIID-------PNHEIEFPD------ 244
Query: 634 SLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEF 687
+PE L D++ CL +P+ RIS + L H +
Sbjct: 245 ------IPE----------------KDLQDVLKCCLKRDPKQRISIPELLAHPY 276
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 37/239 (15%)
Query: 164 AKEKKQGKRDQISRIMALKATGNHND--DQTNAKVLPNFESFIVEEEE-------GSGGY 214
A +KQG R S +++ T ++ + D+ + +P+ + ++ E G G +
Sbjct: 347 ANNEKQGVR---SHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQF 403
Query: 215 GTVYRARR---KNDGTVVAIK----CPHANASKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G V++ +N VAIK C + + ++ L M R I+K G
Sbjct: 404 GDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM--RQFDHPHIVKLIGVIT 461
Query: 268 CGDSDCFVLEHV-----KHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKP 322
++ +++ + +V K +DL+ L Y Y L ALA L + VHRD+
Sbjct: 462 --ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAA 519
Query: 323 GNFLFSCK-AVKGYLIDFNLAMVGFDGSFNQAT---LPGTKYVPP--VNGRKVPSAKSL 375
N L S VK L DF L+ D ++ +A+ LP K++ P +N R+ SA +
Sbjct: 520 RNVLVSATDCVK--LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDV 575
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 288 KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA--MVG 345
KK ID + + Y + A+ ++H+ GIVH D+KP NFL +K LIDF +A M
Sbjct: 105 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIANQMQP 162
Query: 346 FDGSFNQATLPGT-KYVPPVNGRKVPSAK 373
S + + GT Y+PP + + S++
Sbjct: 163 DTTSVVKDSQVGTVNYMPPEAIKDMSSSR 191
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 39/114 (34%)
Query: 574 DIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAK 633
D+WS G L Y+ G+TPF +Q I I+KL D N E FP+
Sbjct: 205 DVWSLGCILYYMTYGKTPF----QQIINQISKLHAIID-------PNHEIEFPD------ 247
Query: 634 SLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEF 687
+PE L D++ CL +P+ RIS + L H +
Sbjct: 248 ------IPE----------------KDLQDVLKCCLKRDPKQRISIPELLAHPY 279
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 62/171 (36%), Gaps = 40/171 (23%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK-------------------CPHANASKH 241
+SF G G YG V++ R K DG + A+K H +H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 242 YVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGY 301
L GG I Y CG S + +H + L + Q +GY
Sbjct: 117 PCCVRLEQAWEEGG----ILYLQTELCGPS---LQQHCE-------AWGASLPEAQVWGY 162
Query: 302 C--LFRALASLHKQGIVHRDVKPGNFLFS----CKAVK-GYLIDFNLAMVG 345
ALA LH QG+VH DVKP N CK G L++ A G
Sbjct: 163 LRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 84 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 141
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + TL GT Y+PP + GR
Sbjct: 142 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMIEGR 198
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 185 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 229
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
G+ + APEV+ + GP++DIWS+GV L L+ G PF D
Sbjct: 176 CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP--VNGR 367
H+ +VHRD+KP N L + + DF L+ + DG F + + Y P ++GR
Sbjct: 133 HRHMVVHRDLKPENVLLDAH-MNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGR 190
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 53/133 (39%), Gaps = 40/133 (30%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDL 612
GT + APEVL + + K D+WS GV L L+ G PF G +Q I
Sbjct: 185 GTAYYIAPEVLRKKYDE--KCDVWSCGVILYILLCGYPPFGGQTDQEI------------ 230
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
+ ++ + SF + P+W + + LV LT
Sbjct: 231 --LKRVEKGKFSF-------------DPPDWTQ-----------VSDEAKQLVKLMLTYE 264
Query: 673 PRLRISAEDALKH 685
P RISAE+AL H
Sbjct: 265 PSKRISAEEALNH 277
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 310 LHKQGIVHRDVKPGNFLFSCKAVKGY--LIDFNLAMVGFDGSFNQATLPGTKYVPPVNGR 367
LHK IVHRD+KP N L K+ ++DF L+ G + L Y+ P R
Sbjct: 137 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR 196
Query: 368 K 368
K
Sbjct: 197 K 197
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 209 EGSGGYGTVYRARRKNDGT--VVAIKCPHANASKHYVS---NELRMLERFGGKNFIIKYE 263
EG G ++Y NDGT +VA+K A+A + S E+ +L ++ IIKY+
Sbjct: 41 EGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEH-IIKYK 99
Query: 264 GCFKCGDSDC----FVLEHVKHD--RPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
GC C D+ V+E+V R + + I L+QL + + +A LH Q +H
Sbjct: 100 GC--CEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIH 157
Query: 318 RDVKPGNFLF-SCKAVKGYLIDFNLA 342
RD+ N L + + VK + DF LA
Sbjct: 158 RDLAARNVLLDNDRLVK--IGDFGLA 181
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
G+ + APEV+ + GP++DIWS GV L L+ G PF D E K+RG
Sbjct: 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF--DDEHVPTLFKKIRGG 226
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 28/183 (15%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHY-----VSNELRMLERFGGKN 257
+++ + G G +G V + G VA+K + + + E++ L+ F +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 258 FIIKYEGCFKCGDSDCF-VLEHV----------KHDRPEVLKKEIDLSQLQWYGYCLFRA 306
I Y+ +D F V+E+V KH R E ++ Q+ A
Sbjct: 73 IIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI-------LSA 123
Query: 307 LASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP--V 364
+ H+ +VHRD+KP N L + + DF L+ + DG F + + Y P +
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAH-MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVI 182
Query: 365 NGR 367
+GR
Sbjct: 183 SGR 185
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 549 GPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
G GT F APEV+ R + P +D+W GV L L+ G PF+G E+ + I K
Sbjct: 193 GGRVGTPHFMAPEVVKREPYGKP-VDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 248
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 53/133 (39%), Gaps = 40/133 (30%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDL 612
GT + APEVL + + K D+WS GV L L+ G PF G +Q I
Sbjct: 168 GTAYYIAPEVLRKKYDE--KCDVWSCGVILYILLCGYPPFGGQTDQEI------------ 213
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
+ ++ + SF + P+W + + LV LT
Sbjct: 214 --LKRVEKGKFSF-------------DPPDWTQ-----------VSDEAKQLVKLMLTYE 247
Query: 673 PRLRISAEDALKH 685
P RISAE+AL H
Sbjct: 248 PSKRISAEEALNH 260
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 310 LHKQGIVHRDVKPGNFLFSCKAVKGY--LIDFNLAMVGFDGSFNQATLPGTKYVPPVNGR 367
LHK IVHRD+KP N L K+ ++DF L+ G + L Y+ P R
Sbjct: 120 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR 179
Query: 368 K 368
K
Sbjct: 180 K 180
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 549 GPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
G GT F APEV+ R + P +D+W GV L L+ G PF+G E+ + I K
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKP-VDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 246
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCK--AVKGYLIDFNLAM 343
+ AL H I+HRDVKP N L + K + L DF +A+
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAI 181
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 549 GPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
G GT F APEV+ R + P +D+W GV L L+ G PF+G E+ + I K
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKP-VDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 246
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERF-GGKNFII 260
GSGG+G+VY R +D VAIK + + V E+ +L++ G + +I
Sbjct: 17 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI 76
Query: 261 KYEGCFKCGDSDCFVLEHVK--HDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIV 316
+ F+ DS +LE ++ D + + + L + + + + + A+ H G++
Sbjct: 77 RLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 136
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
HRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 137 HRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD--FDGTRVYSPP 182
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 159 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 218
Query: 597 E 597
E
Sbjct: 219 E 219
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
K D C G+ + APE+ ++ GP++D+WS GV L L+ G PF G QN+K++ +
Sbjct: 161 KLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---QNLKELRE 216
Query: 606 --LRG 608
LRG
Sbjct: 217 RVLRG 221
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
K D C G+ + APE+ ++ GP++D+WS GV L L+ G PF G QN+K++ +
Sbjct: 166 KLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---QNLKELRE 221
Query: 606 --LRG 608
LRG
Sbjct: 222 RVLRG 226
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
K D C G+ + APE+ ++ GP++D+WS GV L L+ G PF G QN+K++ +
Sbjct: 168 KLDEFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG---QNLKELRE 223
Query: 606 --LRG 608
LRG
Sbjct: 224 RVLRG 228
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 288 KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA--MVG 345
KK ID + + Y + A+ ++H+ GIVH D+KP NFL +K LIDF +A M
Sbjct: 101 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIANQMQP 158
Query: 346 FDGSFNQATLPGT-KYVPPVNGRKVPSAK 373
S + + GT Y+PP + + S++
Sbjct: 159 DTTSVVKDSQVGTVNYMPPEAIKDMSSSR 187
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 39/114 (34%)
Query: 574 DIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAK 633
D+WS G L Y+ G+TPF +Q I I+KL D N E FP+
Sbjct: 201 DVWSLGCILYYMTYGKTPF----QQIINQISKLHAIID-------PNHEIEFPD------ 243
Query: 634 SLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEF 687
+PE L D++ CL +P+ RIS + L H +
Sbjct: 244 ------IPE----------------KDLQDVLKCCLKRDPKQRISIPELLAHPY 275
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 288 KKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
KK ID + + Y + A+ ++H+ GIVH D+KP NFL +K LIDF +A
Sbjct: 121 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIA 173
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 39/114 (34%)
Query: 574 DIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAK 633
D+WS G L Y+ G+TPF +Q I I+KL D N E FP+
Sbjct: 221 DVWSLGCILYYMTYGKTPF----QQIINQISKLHAIID-------PNHEIEFPD------ 263
Query: 634 SLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEF 687
+PE L D++ CL +P+ RIS + L H +
Sbjct: 264 ------IPE----------------KDLQDVLKCCLKRDPKQRISIPELLAHPY 295
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFII 260
+ + V+E+ G G Y R K A+K + SK + E+ +L R+G II
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI--IDKSKRDPTEEIEILLRYGQHPNII 79
Query: 261 KYEGCFKCGDSDCFVLEHVKHDR--PEVLKKEIDLSQLQWYG--YCLFRALASLHKQGIV 316
+ + G V E +K ++L+++ S+ + + + + + LH QG+V
Sbjct: 80 TLKDVYDDGKYVYVVTELMKGGELLDKILRQKF-FSEREASAVLFTITKTVEYLHAQGVV 138
Query: 317 HRDVKPGNFLF 327
HRD+KP N L+
Sbjct: 139 HRDLKPSNILY 149
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 56/149 (37%), Gaps = 37/149 (24%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
PC T F APEVL R Q DIWS GV L ++ G TPF P+
Sbjct: 180 PCY-TANFVAPEVLER-QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---------- 227
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
PE++ A +L + + + DLV K L
Sbjct: 228 ----------------PEEILARIGSGKFSLS---------GGYWNSVSDTAKDLVSKML 262
Query: 670 TVNPRLRISAEDALKHEFFAPCHEMLRKQ 698
V+P R++A L+H + ++ + Q
Sbjct: 263 HVDPHQRLTAALVLRHPWIVHWDQLPQYQ 291
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 37/239 (15%)
Query: 164 AKEKKQGKRDQISRIMALKATGNHND--DQTNAKVLPNFESFIVEEEE-------GSGGY 214
A +KQG R S +++ T ++ + D+ + +P+ + ++ E G G +
Sbjct: 347 ANNEKQGVR---SHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQF 403
Query: 215 GTVYRA---RRKNDGTVVAIK----CPHANASKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G V++ +N VAIK C + + ++ L M R I+K G
Sbjct: 404 GDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM--RQFDHPHIVKLIGVIT 461
Query: 268 CGDSDCFVLEHV-----KHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKP 322
++ +++ + +V K +DL+ L Y Y L ALA L + VHRD+
Sbjct: 462 --ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAA 519
Query: 323 GNFLFSCK-AVKGYLIDFNLAMVGFDGSFNQAT---LPGTKYVPP--VNGRKVPSAKSL 375
N L S VK L DF L+ D ++ +A+ LP K++ P +N R+ SA +
Sbjct: 520 RNVLVSSNDCVK--LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDV 575
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 5/138 (3%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCG 269
GSG +G +Y G VAIK + E + + G I + C G
Sbjct: 18 GSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIPSIKWCGAEG 77
Query: 270 DSDCFVLEHVK---HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFL 326
D + V+E + D ++ L + + + +H + +HRDVKP NFL
Sbjct: 78 DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFL 137
Query: 327 FSC--KAVKGYLIDFNLA 342
K Y+IDF LA
Sbjct: 138 MGLGKKGNLVYIIDFGLA 155
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 72/180 (40%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 69 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 126
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L G L N S + TL GT Y+PP + GR
Sbjct: 127 HSKRVIHRDIKPENLLLGS---AGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 183
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 170 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLE---RFGGKNFIIKYEG 264
E G G YG V + R G ++A+K A + L L+ R F + + G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 265 C-FKCGDSDCFVLEHVKHDRPEVLKKEIDLSQ------LQWYGYCLFRALASLH-KQGIV 316
F+ GD +E + + K+ ID Q L + +AL LH K ++
Sbjct: 118 ALFREGDV-WICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 176
Query: 317 HRDVKPGNFLFS-------CK-AVKGYLID 338
HRDVKP N L + C + GYL+D
Sbjct: 177 HRDVKPSNVLINALGQVKMCDFGISGYLVD 206
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 552 AGTKGFRAPEVL---FRSQHQGPKLDIWSAGVTLLYLMIGRTPF--FGDPEQNIKDIAK 605
AG K + APE + + K DIWS G+T++ L I R P+ +G P Q +K + +
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 68 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDG---SFNQATLPGT-KYVPP--V 364
H + ++HRD+KP N L + +A G+ S + TL GT Y+PP +
Sbjct: 126 HSKRVIHRDIKPENLLLGSAG------ELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMI 179
Query: 365 NGR 367
GR
Sbjct: 180 EGR 182
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 168 SGTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFGGKNFIIKYEG 264
G G Y V R K + A++ + + +V E + E+ F++
Sbjct: 61 GRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 120
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
CF+ FV+E+V D ++++ L + ++Y + AL LH++GI++RD+K
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 180
Query: 322 PGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
N L + +K L D+ + G +T GT Y+ P
Sbjct: 181 LDNVLLDSEGHIK--LTDYGMCKEGLRPGDTTSTFCGTPNYIAP 222
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF-----FGDPEQNIKD 602
GT + APE+L R + G +D W+ GV + +M GR+PF +P+QN +D
Sbjct: 215 GTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 268
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 19/167 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPH-----ANASKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G V R K G A+K A + E R+L+ F+ +
Sbjct: 17 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY 75
Query: 265 CFKCGDSDCFVLEHVKH-------DRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F+ D CFV+E+ R V +E + ++YG + AL LH + +V+
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEE----RARFYGAEIVSALEYLHSRDVVY 131
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
RD+K N + K + DF L G T GT +Y+ P
Sbjct: 132 RDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 177
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
GT + APEVL G +D W GV + +M GR PF+ + + ++
Sbjct: 170 GTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 219
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 19/167 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPH-----ANASKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G V R K G A+K A + E R+L+ F+ +
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY 72
Query: 265 CFKCGDSDCFVLEHVKH-------DRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F+ D CFV+E+ R V +E + ++YG + AL LH + +V+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEE----RARFYGAEIVSALEYLHSRDVVY 128
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
RD+K N + K + DF L G T GT +Y+ P
Sbjct: 129 RDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 174
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
GT + APEVL G +D W GV + +M GR PF+ + + ++
Sbjct: 167 GTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 72/180 (40%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 70 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L G L N S + TL GT Y+PP + GR
Sbjct: 128 HSKRVIHRDIKPENLLLGS---AGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 184
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 171 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKH----YVSNELRMLERFGGKNF 258
F + + GSG +G +Y VAIK + +KH Y S R+L+ GG
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-TKHPQLLYESKIYRILQ--GGTGI 65
Query: 259 I-IKYEGCFKCGDSDCFVLEHVK---HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQG 314
+++ G GD + V++ + D +++ L + + + +H +
Sbjct: 66 PNVRWFGV--EGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS 123
Query: 315 IVHRDVKPGNFLFSC--KAVKGYLIDFNLAMVGFDGSFNQ 352
+HRD+KP NFL +A + Y+IDF LA D S +Q
Sbjct: 124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 70 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + TL GT Y+PP + GR
Sbjct: 128 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMIEGR 184
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 171 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
GT + APEVL + ++GP+L++WS GVTL L+ PF
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 19/167 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPH-----ANASKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G V R K G A+K A + E R+L+ F+ +
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY 72
Query: 265 CFKCGDSDCFVLEHVKH-------DRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F+ D CFV+E+ R V +E + ++YG + AL LH + +V+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEE----RARFYGAEIVSALEYLHSRDVVY 128
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
RD+K N + K + DF L G T GT +Y+ P
Sbjct: 129 RDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 174
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
GT + APEVL G +D W GV + +M GR PF+ + + ++
Sbjct: 167 GTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 67 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + TL GT Y+PP + GR
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMIEGR 181
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 168 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 72 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + TL GT Y+PP + GR
Sbjct: 130 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMIEGR 186
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 173 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLE---RFGGKNFIIKYEG 264
E G G YG V + R G ++A+K A + L L+ R F + + G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 265 C-FKCGDSDCFVLEHVKHDRPEVLKKEIDLSQ------LQWYGYCLFRALASLH-KQGIV 316
F+ GD +E + + K+ ID Q L + +AL LH K ++
Sbjct: 74 ALFREGDV-WICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 132
Query: 317 HRDVKPGNFLFS-------CK-AVKGYLID 338
HRDVKP N L + C + GYL+D
Sbjct: 133 HRDVKPSNVLINALGQVKMCDFGISGYLVD 162
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 552 AGTKGFRAPEVL---FRSQHQGPKLDIWSAGVTLLYLMIGRTPF--FGDPEQNIKDIAK 605
AG K + APE + + K DIWS G+T++ L I R P+ +G P Q +K + +
Sbjct: 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 72 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + TL GT Y+PP + GR
Sbjct: 130 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEXIEGR 186
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE + H K+D+WS GV ++G+ PF + Q
Sbjct: 173 GTLDYLPPEXIEGRXHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 20/174 (11%)
Query: 202 SFIVEEEEGSGGYGTVYRARRKNDGTVVAIK------CPHANASKHYVSNELRMLERFGG 255
+F +E++ G G + VYRA DG VA+K A A + E+ +L++
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI-KEIDLLKQLNH 91
Query: 256 KNFIIKYEGCFKCGDSDCFVLE---------HVKHDRPEVLKKEIDLSQLQWYGYCLFRA 306
N +IKY F + VLE +KH + + K+ I + Y L A
Sbjct: 92 PN-VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQ--KRLIPERTVWKYFVQLCSA 148
Query: 307 LASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
L +H + ++HRD+KP N + V L D L + +L GT Y
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVK-LGDLGLGRFFSSKTTAAHSLVGTPY 201
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAK 605
GT + +PE + + + K DIWS G L + ++PF+GD + N+ + K
Sbjct: 197 VGTPYYMSPERIHENGYNF-KSDIWSLGCLLYEMAALQSPFYGD-KMNLYSLCK 248
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 66 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 123
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + TL GT Y+PP + GR
Sbjct: 124 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMIEGR 180
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN 599
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 167 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 212
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 20/148 (13%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 46 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 101
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
CF+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 102 LYFCFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 159
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
HRD+KP N L + + + + DF A V
Sbjct: 160 HRDLKPENILLN-EDMHIQITDFGTAKV 186
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 48/172 (27%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCG 269
GSGG+G V++A+ + DG I+ N K E++ L + N I+ Y GC+
Sbjct: 21 GSGGFGQVFKAKHRIDGKTYVIRRVKYNNEK--AEREVKALAKLDHVN-IVHYNGCWDGF 77
Query: 270 DSD---------------------------CFVL-----------EHVKHDRPEVLKKEI 291
D D C + + ++ R E L K +
Sbjct: 78 DYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 137
Query: 292 DLSQLQWYGYCLFRALASLHKQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLA 342
L + + + + +H + ++HRD+KP N FL K VK + DF L
Sbjct: 138 ALELFEQ----ITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVK--IGDFGLV 183
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 5/138 (3%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCG 269
GSG +G +Y G VAIK + E ++ + G I C G
Sbjct: 18 GSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEG 77
Query: 270 DSDCFVLEHVK---HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFL 326
D + V+E + D ++ L + + + +H + +HRDVKP NFL
Sbjct: 78 DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFL 137
Query: 327 FSC--KAVKGYLIDFNLA 342
K Y+IDF LA
Sbjct: 138 MGLGKKGNLVYIIDFGLA 155
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 70 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + TL GT Y+PP + GR
Sbjct: 128 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMIEGR 184
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN 599
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 171 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFII 260
+ + V+E+ G G Y R K A+K + SK + E+ +L R+G II
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKI--IDKSKRDPTEEIEILLRYGQHPNII 79
Query: 261 KYEGCFKCGDSDCFVLEHVKHDR--PEVLKKEIDLSQLQWYG--YCLFRALASLHKQGIV 316
+ + G V E K ++L+++ S+ + + + + + LH QG+V
Sbjct: 80 TLKDVYDDGKYVYVVTELXKGGELLDKILRQKF-FSEREASAVLFTITKTVEYLHAQGVV 138
Query: 317 HRDVKPGNFLF 327
HRD+KP N L+
Sbjct: 139 HRDLKPSNILY 149
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 55/149 (36%), Gaps = 37/149 (24%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
PC T F APEVL R Q DIWS GV L + G TPF P+
Sbjct: 180 PCY-TANFVAPEVLER-QGYDAACDIWSLGVLLYTXLTGYTPFANGPDDT---------- 227
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
PE++ A +L + + + DLV K L
Sbjct: 228 ----------------PEEILARIGSGKFSLS---------GGYWNSVSDTAKDLVSKXL 262
Query: 670 TVNPRLRISAEDALKHEFFAPCHEMLRKQ 698
V+P R++A L+H + ++ + Q
Sbjct: 263 HVDPHQRLTAALVLRHPWIVHWDQLPQYQ 291
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 22/152 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK-CPHANASKHYVSNELRMLERFGGKNFIIKYEGCF-- 266
G G +G V +AR D AIK H + +E+ +L + ++++Y +
Sbjct: 15 GQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ-YVVRYYAAWLE 73
Query: 267 ----------KCGDSDCFV-LEHVKHDRPEVLKKEIDLSQLQWYGYCLFR----ALASLH 311
S F+ +E+ ++ L +L+Q + + LFR AL+ +H
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLA 342
QGI+HRD+KP N F+ + VK + DF LA
Sbjct: 134 SQGIIHRDLKPMNIFIDESRNVK--IGDFGLA 163
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 22/152 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK-CPHANASKHYVSNELRMLERFGGKNFIIKYEGCF-- 266
G G +G V +AR D AIK H + +E+ +L + ++++Y +
Sbjct: 15 GQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ-YVVRYYAAWLE 73
Query: 267 ----------KCGDSDCFV-LEHVKHDRPEVLKKEIDLSQLQWYGYCLFR----ALASLH 311
S F+ +E+ ++ L +L+Q + + LFR AL+ +H
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLA 342
QGI+HRD+KP N F+ + VK + DF LA
Sbjct: 134 SQGIIHRDLKPMNIFIDESRNVK--IGDFGLA 163
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+G++KKD GT + APEVL + H ++DIWS G L L++G+ PF
Sbjct: 195 DGERKKD--LCGTPNYIAPEVLCKKGHSF-EVDIWSLGCILYTLLVGKPPF 242
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 25/170 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKC--------PHANASKHYVSNELRMLERFGGKNFIIK 261
G GG+ Y + V A K PH K +S E+ + + + ++
Sbjct: 51 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH---QKEKMSTEIAIHKSLDNPH-VVG 106
Query: 262 YEGCFKCGDSDCFVLEHVK-------HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQG 314
+ G F+ D VLE + H R +K + + +++ + + LH
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKR----RKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGTKYVPP 363
++HRD+K GN LF + + DF LA + FDG + Y+ P
Sbjct: 163 VIHRDLKLGN-LFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 211
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 67 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S +A L GT Y+PP + GR
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRAALCGTLDYLPPEMIEGR 181
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN 599
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 168 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 70
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 71 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 128
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + TL GT Y+PP + GR
Sbjct: 129 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMIEGR 185
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN 599
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 172 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 217
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKN-IISLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F + D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
RD+KP N + ++DF LA SF T+Y
Sbjct: 150 RDLKPSNIVVKSDXTLK-ILDFGLARTA-GTSFMMTPYVVTRY 190
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 230
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 231 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 282
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 5/138 (3%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCG 269
GSG +G +Y G VAIK + E ++ + G I C G
Sbjct: 16 GSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEG 75
Query: 270 DSDCFVLEHVK---HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFL 326
D + V+E + D ++ L + + + +H + +HRDVKP NFL
Sbjct: 76 DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFL 135
Query: 327 FSC--KAVKGYLIDFNLA 342
K Y+IDF LA
Sbjct: 136 MGLGKKGNLVYIIDFGLA 153
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+G++KKD GT + APEVL + H ++DIWS G L L++G+ PF
Sbjct: 179 DGERKKD--LCGTPNYIAPEVLCKKGHSF-EVDIWSLGCILYTLLVGKPPF 226
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 25/170 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKC--------PHANASKHYVSNELRMLERFGGKNFIIK 261
G GG+ Y + V A K PH K +S E+ + + + ++
Sbjct: 35 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH---QKEKMSTEIAIHKSLDNPH-VVG 90
Query: 262 YEGCFKCGDSDCFVLEHVK-------HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQG 314
+ G F+ D VLE + H R +K + + +++ + + LH
Sbjct: 91 FHGFFEDDDFVYVVLEICRRRSLLELHKR----RKAVTEPEARYFMRQTIQGVQYLHNNR 146
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGTKYVPP 363
++HRD+K GN LF + + DF LA + FDG + Y+ P
Sbjct: 147 VIHRDLKLGN-LFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 195
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 70 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S +A L GT Y+PP + GR
Sbjct: 128 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRAALCGTLDYLPPEMIEGR 184
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 171 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 68 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + TL GT Y+PP + GR
Sbjct: 126 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRDTLCGTLDYLPPEMIEGR 182
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
++D C GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 163 RRDTLC-GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 99 LVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL 158
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 159 K-ILDFGLARTA-GTSFMMTPYVVTRY 183
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 177 PYVVTRYYRAPEVILGMGYKE-NVDIWSVGCIMGEMVRHKILFPG------------RDY 223
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 224 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 275
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 276 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 243 VSNELRMLERFGGKNFIIKYEGCFKCGDSDCF-VLEHVKHDRPEVL----KKEIDLSQLQ 297
V E+++L R KN I + + + V+E+ E+L +K + Q
Sbjct: 53 VKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAH 112
Query: 298 WYGYCLFRALASLHKQGIVHRDVKPGNFLFS 328
Y L L LH QGIVH+D+KPGN L +
Sbjct: 113 GYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT 143
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 553 GTKGFRAPEVL-FRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
G+ F+ PE+ G K+DIWSAGVTL + G PF GD
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 210 GSGGYGTVYRARR---KNDGTVVAIKC-------PHANASKHYVSNELRMLERFGGKNFI 259
G GGYG V++ R+ N G + A+K +A + H E +LE FI
Sbjct: 26 GKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAH-TKAERNILEEVK-HPFI 83
Query: 260 IKYEGCFKCGDSDCFVLEHV-------KHDRPEVLKKEIDLSQLQWYGYCLFRALASLHK 312
+ F+ G +LE++ + +R + ++ +Y + AL LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTAC----FYLAEISMALGHLHQ 139
Query: 313 QGIVHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGF-DGSFNQATLPGTKYVPP 363
+GI++RD+KP N + + + VK L DF L DG+ +Y+ P
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVK--LTDFGLCKESIHDGTVTHTFCGTIEYMAP 190
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKD 602
GT + APE+L RS H +D WS G + ++ G PF G+ + D
Sbjct: 183 GTIEYMAPEILMRSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 9/161 (5%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G V A G VA+K + + + E+ L R IIK
Sbjct: 23 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHPHIIKLYD 81
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGIVHRDVKP 322
K D V+E+ ++ + + + +S+ + + + A+ H+ IVHRD+KP
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKP 141
Query: 323 GNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
N L + + + DF L+ + DG+F + + Y P
Sbjct: 142 ENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 181
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
G+ + APEV+ + GP++D+WS GV L ++ R PF
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 213
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKN-IIGLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F S D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
RD+KP N + ++DF LA SF T+Y
Sbjct: 150 RDLKPSNIVVKSDCTLK-ILDFGLARTA-GTSFMMTPYVVTRY 190
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRG 608
P T+ +RAPEV+ ++ +DIWS G + ++ G F G D + + G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 609 SEDLWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD 666
+ + KL ++ E+ YA S + P+ L + ++ S DL+
Sbjct: 243 TPSPEFMKKLQPTVRTYVENRPKYAGYSFEKL-FPD--VLFPADSEHNKLKASQARDLLS 299
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
K L ++ RIS ++AL+H +
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 9/161 (5%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G V A G VA+K + + + E+ L R IIK
Sbjct: 13 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHPHIIKLYD 71
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGIVHRDVKP 322
K D V+E+ ++ + + + +S+ + + + A+ H+ IVHRD+KP
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKP 131
Query: 323 GNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
N L + + + DF L+ + DG+F + + Y P
Sbjct: 132 ENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 171
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
G+ + APEV+ + GP++D+WS GV L ++ R PF
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 203
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 48/198 (24%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPAFVAPEIV-NYEPLG 195
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLY 630
+ D+WS GV L+ G +PF GD +Q E L V+ ++ F ++ +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQ-----------ETLANVSAVN---YEFEDEYF 241
Query: 631 AAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAP 690
+ N K D + + L +P+ R++ +D+L+H + P
Sbjct: 242 S-------NTSALAK-----------------DFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Query: 691 CHEMLRKQKLLRQGSSID 708
+Q L R+ S+++
Sbjct: 278 KDT---QQALSRKASAVN 292
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 77 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + + V + +IDF LA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFGGKNFIIKYEG 264
G G Y V R K + A+K + + +V E + E+ F++
Sbjct: 29 GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 88
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDL--SQLQWYGYCLFRALASLHKQGIVHRDVK 321
CF+ FV+E+V D ++++ L ++Y + AL LH++GI++RD+K
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 148
Query: 322 PGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
N L + +K L D+ + G + GT Y+ P
Sbjct: 149 LDNVLLDSEGHIK--LTDYGMCKEGLRPGDTTSXFCGTPNYIAP 190
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF-----FGDPEQNIKD 602
GT + APE+L R + G +D W+ GV + +M GR+PF +P+QN +D
Sbjct: 183 GTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 236
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 12/142 (8%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA--SKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G G +G V++ G +A K K V NE+ ++ + N I Y+ F+
Sbjct: 98 GGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD-AFE 156
Query: 268 CGDSDCFVLEHVKHDRPEVLKKEIDLS-QLQWYGYCLF-----RALASLHKQGIVHRDVK 321
+ V+E+V D E+ + ID S L LF + +H+ I+H D+K
Sbjct: 157 SKNDIVLVMEYV--DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLK 214
Query: 322 PGNFLFSCKAVKGY-LIDFNLA 342
P N L + K +IDF LA
Sbjct: 215 PENILCVNRDAKQIKIIDFGLA 236
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 59/156 (37%), Gaps = 43/156 (27%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPE-QNIKDIAKLRGSED 611
GT F APEV+ P D+WS GV L+ G +PF GD + + + +I R
Sbjct: 250 GTPEFLAPEVVNYDFVSFPT-DMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACR---- 304
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
W++ + F + AK + + K L
Sbjct: 305 -WDL-----EDEEFQDISEEAK-----------------------------EFISKLLIK 329
Query: 672 NPRLRISAEDALKHEFFA--PCHEMLRKQKLLRQGS 705
RISA +ALKH + + H L QK +GS
Sbjct: 330 EKSWRISASEALKHPWLSDHKLHSRLSAQKKKNRGS 365
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKXVNHKN-IISLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F + D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
RD+KP N + ++DF LA SF T+Y
Sbjct: 150 RDLKPSNIVVKSDXTLK-ILDFGLARTA-GTSFMMTPYVVTRY 190
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 230
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 231 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 282
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 64 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 121
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + TL GT Y+PP + GR
Sbjct: 122 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMIEGR 178
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN 599
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 165 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 210
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 185 GNHNDDQTNAKVLPN---FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKH 241
G ++DDQ + +P+ + V + G G +G V +A VA+K H
Sbjct: 78 GGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH 137
Query: 242 -YVSNELRMLERFGGKN-----FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE----I 291
+ E+R+LE ++ +I F + C E + + E++KK
Sbjct: 138 RQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGF 197
Query: 292 DLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGY-LIDF 339
L ++ + + + + L +LHK I+H D+KP N L + G +IDF
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF 246
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 9/161 (5%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G V A G VA+K + + + E+ L R IIK
Sbjct: 22 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHPHIIKLYD 80
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGIVHRDVKP 322
K D V+E+ ++ + + + +S+ + + + A+ H+ IVHRD+KP
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKP 140
Query: 323 GNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
N L + + + DF L+ + DG+F + + Y P
Sbjct: 141 ENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 180
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
G+ + APEV+ + GP++D+WS GV L ++ R PF
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 212
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 9/161 (5%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G V A G VA+K + + + E+ L R IIK
Sbjct: 17 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHPHIIKLYD 75
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGIVHRDVKP 322
K D V+E+ ++ + + + +S+ + + + A+ H+ IVHRD+KP
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKP 135
Query: 323 GNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
N L + + + DF L+ + DG+F + + Y P
Sbjct: 136 ENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 175
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
G+ + APEV+ + GP++D+WS GV L ++ R PF
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 207
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 12/164 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFGGKNFIIKYEG 264
G G Y V R K + A+K + + +V E + E+ F++
Sbjct: 14 GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 73
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
CF+ FV+E+V D ++++ L + ++Y + AL LH++GI++RD+K
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 133
Query: 322 PGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
N L + +K L D+ + G + GT Y+ P
Sbjct: 134 LDNVLLDSEGHIK--LTDYGMCKEGLRPGDTTSXFCGTPNYIAP 175
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF-----FGDPEQNIKD 602
GT + APE+L R + G +D W+ GV + +M GR+PF +P+QN +D
Sbjct: 168 GTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN 599
+K GT + +PE+ RS H G + D+WS G L+IGR PF D +N
Sbjct: 166 HEKHYTLCGTPNYISPEIATRSAH-GLESDVWSLGCMFYTLLIGRPPFDTDTVKN 219
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK-----HYVSNELRMLERFG 254
E F V G G + VYRA + G VAIK A V NE+++ +
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVKH-DRPEVLK---KEIDLSQLQWYGYCLFRALASL 310
+ I++ F+ + VLE + + LK K ++ + + + + + L
Sbjct: 70 HPS-ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
H GI+HRD+ N L + + + + DF LA TL GT Y+ P
Sbjct: 129 HSHGILHRDLTLSNLLLT-RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISP 181
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 210 GSGGYGTVYRARR---KNDGTVVAIKC-------PHANASKHYVSNELRMLERFGGKNFI 259
G GGYG V++ R+ N G + A+K +A + H E +LE FI
Sbjct: 26 GKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAH-TKAERNILEEVK-HPFI 83
Query: 260 IKYEGCFKCGDSDCFVLEHV-------KHDRPEVLKKEIDLSQLQWYGYCLFRALASLHK 312
+ F+ G +LE++ + +R + ++ +Y + AL LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTAC----FYLAEISMALGHLHQ 139
Query: 313 QGIVHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGF-DGSFNQATLPGTKYVPP 363
+GI++RD+KP N + + + VK L DF L DG+ +Y+ P
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVK--LTDFGLCKESIHDGTVTHXFCGTIEYMAP 190
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKD 602
GT + APE+L RS H +D WS G + ++ G PF G+ + D
Sbjct: 183 GTIEYMAPEILMRSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKC---PHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V A G VA+K P N A + Y EL +L+ KN II
Sbjct: 31 GSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY--RELVLLKCVNHKN-IISLL 87
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F + D + V+E + + +V+ E+D ++ + Y + + LH GI+H
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIH 147
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLA 342
RD+KP N + ++DF LA
Sbjct: 148 RDLKPSNIVVKSDCTLK-ILDFGLA 171
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRG 608
P T+ +RAPEV+ ++ +DIWS G + L+ G F G D + + G
Sbjct: 182 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLG 240
Query: 609 SEDLWEVAKLHNRESSFPEDLYAAKSLPPINL-PEWCKLITKRPDFLEVIPSSLFDLVDK 667
+ +A L ++ E+ A + L P+W + + ++ S DL+ K
Sbjct: 241 TPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDW--IFPSESERDKIKTSQARDLLSK 298
Query: 668 CLTVNPRLRISAEDALKHEFFAPCHE 693
L ++P RIS ++AL+H + ++
Sbjct: 299 MLVIDPDKRISVDEALRHPYITVWYD 324
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK----CPHANASKHYVSNELRMLERFGGKNFIIKYEGC 265
G+G YG + RRK+DG ++ K A K + +E+ +L N + Y+
Sbjct: 15 GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRI 74
Query: 266 FKCGDSDCF-VLEHVK-HDRPEVLKKEIDLSQLQWYGYC------LFRALASLHKQG--- 314
++ + V+E+ + D V+ K Q + L AL H++
Sbjct: 75 IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGG 134
Query: 315 --IVHRDVKPGN-FLFSCKAVKGYLIDFNLA-MVGFDGSFNQATLPGTKYVPP 363
++HRD+KP N FL + VK L DF LA ++ D SF +A + Y+ P
Sbjct: 135 HTVLHRDLKPANVFLDGKQNVK--LGDFGLARILNHDTSFAKAFVGTPYYMSP 185
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + + P N A + Y EL +++ KN II
Sbjct: 35 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKN-IIGLL 91
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F S D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 151
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
RD+KP N + ++DF LA SF T+Y
Sbjct: 152 RDLKPSNIVVKSDCTLK-ILDFGLARTA-GTSFMMVPFVVTRY 192
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRG 608
P T+ +RAPEV+ ++ +DIWS G + ++ G F G D + + G
Sbjct: 186 PFVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 244
Query: 609 SEDLWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD 666
+ + KL ++ E+ YA S + P+ L + ++ S DL+
Sbjct: 245 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKL-FPD--VLFPADSEHNKLKASQARDLLS 301
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
K L ++ RIS ++AL+H +
Sbjct: 302 KMLVIDASKRISVDEALQHPYI 323
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 60/146 (41%), Gaps = 39/146 (26%)
Query: 553 GTKGFRAPEVLF-RSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS-E 610
GT F PE S + G K+DIWS G+ L + PF L+ S
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF------------SLKISLV 259
Query: 611 DLWEVAKLHNRESSFPED----LYAAKSLPPINLPEWCK---LITKRPDFLEVIPSSLFD 663
+L+ + N E +P D LY P N C L + DFL++
Sbjct: 260 ELFNNIRTKNIE--YPLDRNHFLY-----PLTNKKSTCSNNFLSNEDIDFLKLF------ 306
Query: 664 LVDKCLTVNPRLRISAEDALKHEFFA 689
L NP RI++EDALKHE+ A
Sbjct: 307 -----LRKNPAERITSEDALKHEWLA 327
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 43/142 (30%)
Query: 552 AGTKGFRAPEVLFRSQHQ-----GPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKL 606
GT + APE++ S + G ++D+WS GV + L+ G PF+ + K + L
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW-----HRKQMLML 238
Query: 607 RGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD 666
R + + F PEW D+ + + DLV
Sbjct: 239 R---------MIMSGNYQFGS-------------PEW-------DDYSDTVK----DLVS 265
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
+ L V P+ R +AE+AL H FF
Sbjct: 266 RFLVVQPQKRYTAEEALAHPFF 287
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLF 327
L + +LHK IVHRD+KP N L
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILL 157
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 48/198 (24%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 195
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLY 630
+ D+WS GV L+ G +PF GD +Q E L V+ ++ F ++ +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQ-----------ETLANVSAVN---YEFEDEYF 241
Query: 631 AAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAP 690
+ N K D + + L +P+ R++ +D+L+H + P
Sbjct: 242 S-------NTSALAK-----------------DFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Query: 691 CHEMLRKQKLLRQGSSID 708
+Q L R+ S+++
Sbjct: 278 KD---TQQALSRKASAVN 292
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 77 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + + V + +IDF LA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 188 NDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNEL 247
N ++ + ++ E FI+ + G G +G V+ A K AIK + E
Sbjct: 4 NKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC 63
Query: 248 RMLER----FGGKNFIIKYEGC-FKCGDSDCFVLEHVKH-DRPEVLKK--EIDLSQLQWY 299
M+E+ ++ + + C F+ ++ FV+E++ D ++ + DLS+ +Y
Sbjct: 64 TMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY 123
Query: 300 GYCLFRALASLHKQGIVHRDVKPGNFL 326
+ L LH +GIV+RD+K N L
Sbjct: 124 AAEIILGLQFLHSKGIVYRDLKLDNIL 150
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 543 GKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNI 600
G K + C GT + APE+L Q +D WS GV L ++IG++PF G E+ +
Sbjct: 171 GDAKTNXFC-GTPDYIAPEILL-GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 226
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 12/164 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFGGKNFIIKYEG 264
G G Y V R K + A+K + + +V E + E+ F++
Sbjct: 18 GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 77
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
CF+ FV+E+V D ++++ L + ++Y + AL LH++GI++RD+K
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 137
Query: 322 PGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
N L + +K L D+ + G + GT Y+ P
Sbjct: 138 LDNVLLDSEGHIK--LTDYGMCKEGLRPGDTTSXFCGTPNYIAP 179
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF-----FGDPEQNIKD 602
GT + APE+L R + G +D W+ GV + +M GR+PF +P+QN +D
Sbjct: 172 GTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 43/142 (30%)
Query: 552 AGTKGFRAPEVLFRSQHQ-----GPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKL 606
GT + APE++ S + G ++D+WS GV + L+ G PF+ + K + L
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW-----HRKQMLML 225
Query: 607 RGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD 666
R + + F PEW D+ + + DLV
Sbjct: 226 R---------MIMSGNYQFGS-------------PEW-------DDYSDTVK----DLVS 252
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
+ L V P+ R +AE+AL H FF
Sbjct: 253 RFLVVQPQKRYTAEEALAHPFF 274
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLF 327
L + +LHK IVHRD+KP N L
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILL 144
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 48/198 (24%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 195
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLY 630
+ D+WS GV L+ G +PF GD +Q E L V+ ++ F ++ +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQ-----------ETLANVSAVN---YEFEDEYF 241
Query: 631 AAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAP 690
+ N K D + + L +P+ R++ +D+L+H + P
Sbjct: 242 S-------NTSALAK-----------------DFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Query: 691 CHEMLRKQKLLRQGSSID 708
+Q L R+ S+++
Sbjct: 278 KD---TQQALSRKASAVN 292
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 77 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + + V + +IDF LA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 43/142 (30%)
Query: 552 AGTKGFRAPEVLFRSQHQ-----GPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKL 606
GT + APE++ S + G ++D+WS GV + L+ G PF+ + K + L
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW-----HRKQMLML 238
Query: 607 RGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD 666
R + + F PEW D+ + + DLV
Sbjct: 239 R---------MIMSGNYQFGS-------------PEW-------DDYSDTVK----DLVS 265
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
+ L V P+ R +AE+AL H FF
Sbjct: 266 RFLVVQPQKRYTAEEALAHPFF 287
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLF 327
L + +LHK IVHRD+KP N L
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILL 157
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 185 GNHNDDQTNAKVLPN---FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKH 241
G ++DDQ + +P+ + V + G G +G V +A VA+K H
Sbjct: 78 GGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH 137
Query: 242 -YVSNELRMLERFGGKN-----FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE----I 291
+ E+R+LE ++ +I F + C E + + E++KK
Sbjct: 138 RQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGF 197
Query: 292 DLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGY-LIDF 339
L ++ + + + + L +LHK I+H D+KP N L + G +IDF
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF 246
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 285 EVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLAM 343
+V K +DL+ L Y Y L ALA L + VHRD+ N L S VK L DF L+
Sbjct: 105 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK--LGDFGLSR 162
Query: 344 VGFDGSFNQAT---LPGTKYVPP--VNGRKVPSAKSL 375
D ++ +A+ LP K++ P +N R+ SA +
Sbjct: 163 YMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDV 198
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 285 EVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLAM 343
+V K +DL+ L Y Y L ALA L + VHRD+ N L S VK L DF L+
Sbjct: 104 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK--LGDFGLSR 161
Query: 344 VGFDGSFNQAT---LPGTKYVPP--VNGRKVPSAKSL 375
D ++ +A+ LP K++ P +N R+ SA +
Sbjct: 162 YMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDV 197
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKC---PHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V A G VA+K P N A + Y EL +L+ KN II
Sbjct: 33 GSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY--RELVLLKCVNHKN-IISLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F + D + V+E + + +V+ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLA 342
RD+KP N + ++DF LA
Sbjct: 150 RDLKPSNIVVKSDCTLK-ILDFGLA 173
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRG 608
P T+ +RAPEV+ + +DIWS G + L+ G F G D + + G
Sbjct: 184 PYVVTRYYRAPEVILGMGY-AANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLG 242
Query: 609 SEDLWEVAKLHNRESSFPEDLYAAKSLPPINL----PEWCKLITKRPDFLEVIPSSLFDL 664
+ +A L ++ E+ P I P+W + + ++ S DL
Sbjct: 243 TPSAEFMAALQPTVRNYVEN---RPKYPGIKFEELFPDW--IFPSESERDKIKTSQARDL 297
Query: 665 VDKCLTVNPRLRISAEDALKHEFFAPCHE 693
+ K L ++P RIS ++AL+H + ++
Sbjct: 298 LSKMLVIDPDKRISVDEALRHPYITVWYD 326
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 285 EVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLAM 343
+V K +DL+ L Y Y L ALA L + VHRD+ N L S VK L DF L+
Sbjct: 130 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK--LGDFGLSR 187
Query: 344 VGFDGSFNQAT---LPGTKYVPP--VNGRKVPSAKSL 375
D ++ +A+ LP K++ P +N R+ SA +
Sbjct: 188 YMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDV 223
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 185 GNHNDDQTNAKVLPN---FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKH 241
G ++DDQ + +P+ + V + G G +G V +A VA+K H
Sbjct: 78 GGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFH 137
Query: 242 -YVSNELRMLERFGGKN-----FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE----I 291
+ E+R+LE ++ +I F + C E + + E++KK
Sbjct: 138 RQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGF 197
Query: 292 DLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGY-LIDF 339
L ++ + + + + L +LHK I+H D+KP N L + G +IDF
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF 246
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 285 EVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLAM 343
+V K +DL+ L Y Y L ALA L + VHRD+ N L S VK L DF L+
Sbjct: 107 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK--LGDFGLSR 164
Query: 344 VGFDGSFNQAT---LPGTKYVPP--VNGRKVPSAKSL 375
D ++ +A+ LP K++ P +N R+ SA +
Sbjct: 165 YMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDV 200
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 285 EVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLAM 343
+V K +DL+ L Y Y L ALA L + VHRD+ N L S VK L DF L+
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK--LGDFGLSR 159
Query: 344 VGFDGSFNQAT---LPGTKYVPP--VNGRKVPSAKSL 375
D ++ +A+ LP K++ P +N R+ SA +
Sbjct: 160 YMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDV 195
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANAS---KHYVSNELRMLERFGGKNFIIKYEG 264
E G G YG V + R G + A+K A + + + +L + R F + + G
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 265 C-FKCGDS-DCFVLEHVKHDRPEVLKKEIDLSQ------LQWYGYCLFRALASLH-KQGI 315
F+ GD C L D+ K+ ID Q L + +AL LH K +
Sbjct: 101 ALFREGDVWICXELXDTSLDK--FYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 158
Query: 316 VHRDVKPGNFLFS-------CK-AVKGYLID 338
+HRDVKP N L + C + GYL+D
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVD 189
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 552 AGTKGFRAPEVL---FRSQHQGPKLDIWSAGVTLLYLMIGRTPF--FGDPEQNIKDIAK 605
AG K + APE + + K DIWS G+T + L I R P+ +G P Q +K + +
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 285 EVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLAM 343
+V K +DL+ L Y Y L ALA L + VHRD+ N L S VK L DF L+
Sbjct: 99 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK--LGDFGLSR 156
Query: 344 VGFDGSFNQAT---LPGTKYVPP--VNGRKVPSAKSL 375
D ++ +A+ LP K++ P +N R+ SA +
Sbjct: 157 YMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDV 192
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 285 EVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLAM 343
+V K +DL+ L Y Y L ALA L + VHRD+ N L S VK L DF L+
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK--LGDFGLSR 159
Query: 344 VGFDGSFNQAT---LPGTKYVPP--VNGRKVPSA 372
D ++ +A+ LP K++ P +N R+ SA
Sbjct: 160 YMEDSTYYKASKGKLP-IKWMAPESINFRRFTSA 192
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 144 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
Query: 334 GYLIDFNLA 342
++DF LA
Sbjct: 204 K-ILDFGLA 211
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 222 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 268
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 269 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 320
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 321 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 10/154 (6%)
Query: 196 VLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGG 255
V PNF V ++ G G +G + + VAIK + + E R ++ G
Sbjct: 7 VGPNFR---VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGS 63
Query: 256 KNFIIKYEGCFKCGDSDCFVLEHVK---HDRPEVLKKEIDLSQLQWYGYCLFRALASLHK 312
+ I + CG + VLE + D ++ + L + L + +H
Sbjct: 64 GDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 313 QGIVHRDVKPGNFLFSCKAVKG----YLIDFNLA 342
+ +++RDVKP NFL K ++IDF LA
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 16/145 (11%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKN-IIGLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F S D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLA 342
RD+KP N + ++DF LA
Sbjct: 150 RDLKPSNIVVKSDCTLK-ILDFGLA 173
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRG 608
P T+ +RAPEV+ ++ +DIWS G + ++ G F G D + + G
Sbjct: 184 PEVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 609 SEDLWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD 666
+ + KL ++ E+ YA S + P+ L + + S DL+
Sbjct: 243 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKL-FPD--VLFPADSEHNALKASQARDLLS 299
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
K L ++ RIS ++AL+H +
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKH---YVSNELRMLERFGGKNFIIKYEG 264
E GSG G V++ R + G V+A+K + +K + +L ++ + +I++ G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALASL-HKQGIVHRD 319
F ++D F+ + E LKK I L + +AL L K G++HRD
Sbjct: 92 TF-ITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRD 150
Query: 320 VKPGNFLFSCKAVKGYLIDFNLA 342
VKP N L + + L DF ++
Sbjct: 151 VKPSNILLDERG-QIKLCDFGIS 172
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 93 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + L GT Y+PP + GR
Sbjct: 151 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRDDLCGTLDYLPPEMIEGR 207
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
++D C GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 188 RRDDLC-GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 48/198 (24%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 195
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLY 630
+ D+WS GV L+ G +PF GD +Q E L V+ ++ F ++ +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQ-----------ETLANVSAVN---YEFEDEYF 241
Query: 631 AAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAP 690
+ N K D + + L +P+ R++ +D+L+H + P
Sbjct: 242 S-------NTSALAK-----------------DFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Query: 691 CHEMLRKQKLLRQGSSID 708
+Q L R+ S+++
Sbjct: 278 KD---TQQALSRKASAVN 292
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 77 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + + V + +IDF LA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKN-IIGLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F S D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
RD+KP N + ++DF LA SF T+Y
Sbjct: 150 RDLKPSNIVVKSDCTLK-ILDFGLARTA-GTSFMMTPYVVTRY 190
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRG 608
P T+ +RAPEV+ ++ +DIWS G + ++ G F G D + + G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 609 SEDLWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD 666
+ + KL ++ E+ YA S + P+ L + ++ S DL+
Sbjct: 243 TPSPEFMKKLQPTVRTYVENRPKYAGYSFEKL-FPD--VLFPADSEHNKLKASQARDLLS 299
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
K L ++ RIS ++AL+H +
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 19/167 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPH-----ANASKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G V R K G A+K A + E R+L+ F+ +
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY 72
Query: 265 CFKCGDSDCFVLEHVKH-------DRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F+ D CFV+E+ R V +E + ++YG + AL LH + +V+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEE----RARFYGAEIVSALEYLHSRDVVY 128
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
RD+K N + K + DF L G GT +Y+ P
Sbjct: 129 RDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
GT + APEVL G +D W GV + +M GR PF+ + + ++
Sbjct: 167 GTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 285 EVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLAM 343
+V K +DL+ L Y Y L ALA L + VHRD+ N L S VK L DF L+
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVK--LGDFGLSR 159
Query: 344 VGFDGSFNQAT---LPGTKYVPP--VNGRKVPSA 372
D ++ +A+ LP K++ P +N R+ SA
Sbjct: 160 YMEDSTYYKASKGKLP-IKWMAPESINFRRFTSA 192
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 19/167 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPH-----ANASKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G V R K G A+K A + E R+L+ F+ +
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY 72
Query: 265 CFKCGDSDCFVLEHVKH-------DRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F+ D CFV+E+ R V +E + ++YG + AL LH + +V+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEE----RARFYGAEIVSALEYLHSRDVVY 128
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
RD+K N + K + DF L G GT +Y+ P
Sbjct: 129 RDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
GT + APEVL G +D W GV + +M GR PF+ + + ++
Sbjct: 167 GTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 48/198 (24%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 195
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLY 630
+ D+WS GV L+ G +PF GD +Q E L V+ ++ F ++ +
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQ-----------ETLANVSAVN---YEFEDEYF 241
Query: 631 AAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAP 690
+ N K D + + L +P+ R++ +D+L+H + P
Sbjct: 242 S-------NTSALAK-----------------DFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Query: 691 CHEMLRKQKLLRQGSSID 708
+Q L R+ S+++
Sbjct: 278 KD---TQQALSRKASAVN 292
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 77 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLAM-VGFDGSFNQATLPGT-KYVPP 363
H D+KP N + + V + +IDF LA + F F + GT ++V P
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--NIFGTPEFVAP 186
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 19/167 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPH-----ANASKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G V R K G A+K A + E R+L+ F+ +
Sbjct: 19 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY 77
Query: 265 CFKCGDSDCFVLEHVKH-------DRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F+ D CFV+E+ R V +E + ++YG + AL LH + +V+
Sbjct: 78 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEE----RARFYGAEIVSALEYLHSRDVVY 133
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
RD+K N + K + DF L G GT +Y+ P
Sbjct: 134 RDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 179
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
GT + APEVL G +D W GV + +M GR PF+ + + ++
Sbjct: 172 GTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 221
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 19/167 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPH-----ANASKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G V R K G A+K A + E R+L+ F+ +
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKY 72
Query: 265 CFKCGDSDCFVLEHVKH-------DRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F+ D CFV+E+ R V +E + ++YG + AL LH + +V+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEE----RARFYGAEIVSALEYLHSRDVVY 128
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
RD+K N + K + DF L G GT +Y+ P
Sbjct: 129 RDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
GT + APEVL G +D W GV + +M GR PF+ + + ++
Sbjct: 167 GTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 216
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 106 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 166 K-ILDFGLARTA-GTSFMMTPYVVTRY 190
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 230
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 231 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 282
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 106 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 166 K-ILDFGLARTA-GTSFMMTPYVVTRY 190
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 230
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 231 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 282
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKXVNHKN-IISLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F + D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
RD+KP N + ++DF LA SF T+Y
Sbjct: 150 RDLKPSNIVVKSDXTLK-ILDFGLARTA-GTSFMMTPYVVTRY 190
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 230
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 231 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGL-----TFPKLFPDSLFPA 282
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 107 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 167 K-ILDFGLARTA-GTSFMMTPYVVTRY 191
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 185 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 231
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 232 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 283
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 284 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 107 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 167 K-ILDFGLARTA-GTSFMMTPYVVTRY 191
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 185 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 231
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 232 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 283
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 284 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 105 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 164
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 165 K-ILDFGLARTA-GTSFMMTPYVVTRY 189
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 183 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 229
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 230 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 281
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 282 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 539 LLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+LG+ K + GT + APE+L Q +D WS GV L ++IG++PF G E+
Sbjct: 170 MLGDAKTNE---FCGTPDYIAPEILL-GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE 225
Query: 599 NI 600
+
Sbjct: 226 EL 227
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 188 NDDQTNAKVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNEL 247
N ++ + ++ E F + + G G +G V+ A K AIK + E
Sbjct: 5 NKERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC 64
Query: 248 RMLER----FGGKNFIIKYEGC-FKCGDSDCFVLEHVKH-DRPEVLKK--EIDLSQLQWY 299
M+E+ ++ + + C F+ ++ FV+E++ D ++ + DLS+ +Y
Sbjct: 65 TMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY 124
Query: 300 GYCLFRALASLHKQGIVHRDVKPGNFL 326
+ L LH +GIV+RD+K N L
Sbjct: 125 AAEIILGLQFLHSKGIVYRDLKLDNIL 151
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 22/172 (12%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--------VSNELRMLERFG---GKNF 258
G GG+GTV+ R D VAIK N + E+ +L + G G
Sbjct: 40 GKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPG 99
Query: 259 IIKYEGCFKCGDSDCFVLEHV--KHDRPEVLKKEIDLSQLQWYGYCLF----RALASLHK 312
+I+ F+ + VLE D + + ++ L + C F A+ H
Sbjct: 100 VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP--SRCFFGQVVAAIQHCHS 157
Query: 313 QGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTK-YVPP 363
+G+VHRD+K N L + LIDF + D + GT+ Y PP
Sbjct: 158 RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTD--FDGTRVYSPP 207
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G D P GT+ + PE + R Q+ +WS G+ L ++ G PF D
Sbjct: 184 FGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ 243
Query: 597 E 597
E
Sbjct: 244 E 244
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 10/154 (6%)
Query: 196 VLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGG 255
V PNF V ++ G G +G + + VAIK + + E R ++ G
Sbjct: 7 VGPNFR---VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGS 63
Query: 256 KNFIIKYEGCFKCGDSDCFVLEHVK---HDRPEVLKKEIDLSQLQWYGYCLFRALASLHK 312
+ I + CG + VLE + D ++ + L + L + +H
Sbjct: 64 GDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 313 QGIVHRDVKPGNFLFSCKAVKG----YLIDFNLA 342
+ +++RDVKP NFL K ++IDF LA
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKN-IIGLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F S D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
RD+KP N + ++DF LA SF T+Y
Sbjct: 150 RDLKPSNIVVKSDCTLK-ILDFGLARTA-GTSFMMTPYVVTRY 190
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRG 608
P T+ +RAPEV+ ++ +DIWS G + ++ G F G D + + G
Sbjct: 184 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 609 SEDLWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD 666
+ + KL ++ E+ YA S + P+ L + ++ S DL+
Sbjct: 243 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKL-FPD--VLFPADSEHNKLKASQARDLLS 299
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
K L ++ RIS ++AL+H +
Sbjct: 300 KMLVIDASKRISVDEALQHPYI 321
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 69 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 126
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + L GT Y+PP + GR
Sbjct: 127 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRXXLCGTLDYLPPEMIEGR 183
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 170 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 10/154 (6%)
Query: 196 VLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGG 255
V PNF V ++ G G +G + + VAIK + + E R ++ G
Sbjct: 28 VGPNFR---VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGS 84
Query: 256 KNFIIKYEGCFKCGDSDCFVLEHVK---HDRPEVLKKEIDLSQLQWYGYCLFRALASLHK 312
+ I + CG + VLE + D ++ + L + L + +H
Sbjct: 85 GDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 144
Query: 313 QGIVHRDVKPGNFLFSCKAVKG----YLIDFNLA 342
+ +++RDVKP NFL K ++IDF LA
Sbjct: 145 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 25/132 (18%)
Query: 212 GGYGTVYRARRKNDGTVVAIKCPHANASKH---YVS-----------NELRMLERFGGKN 257
G +G VY+A+ K + A K + + Y+ N +++L+ F +N
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 258 -FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIV 316
I E C G D +LE L++ + SQ+Q AL LH I+
Sbjct: 81 NLWILIEFC-AGGAVDAVMLE---------LERPLTESQIQVVCKQTLDALNYLHDNKII 130
Query: 317 HRDVKPGNFLFS 328
HRD+K GN LF+
Sbjct: 131 HRDLKAGNILFT 142
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 99 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 158
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 159 K-ILDFGLARTA-GTSFMMTPYVVTRY 183
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 177 PYVVTRYYRAPEVILGMGYKE-NVDIWSVGCIMGEMVRHKILFPG------------RDY 223
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 224 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 275
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 276 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 100 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 160 K-ILDFGLARTA-GTSFMMTPYVVTRY 184
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 178 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 224
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 225 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 276
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 277 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 107 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 167 K-ILDFGLARTA-GTSFMMTPYVVTRY 191
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDIAKLRG 608
P T+ +RAPEV+ ++ +DIWS G + ++ G F G D + + G
Sbjct: 185 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 243
Query: 609 SEDLWEVAKLHNRESSFPEDL--YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD 666
+ + KL ++ E+ YA S + P+ L + ++ S DL+
Sbjct: 244 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKL-FPD--VLFPADSEHNKLKASQARDLLS 300
Query: 667 KCLTVNPRLRISAEDALKHEFF 688
K L ++ RIS ++AL+H +
Sbjct: 301 KMLVIDASKRISVDEALQHPYI 322
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 111 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 170
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 171 K-ILDFGLARTA-GTSFMMTPYVVTRY 195
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 35/156 (22%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +D+WS G + ++ + F G R
Sbjct: 189 PYVVTRYYRAPEVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPG------------RDY 235
Query: 610 EDLWE--VAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF----- 662
D W + +L F + L N P++ F ++ P LF
Sbjct: 236 IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGY-----SFEKLFPDVLFPADSE 290
Query: 663 ----------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++ RIS ++AL+H +
Sbjct: 291 HNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 326
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 100 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 160 K-ILDFGLARTA-GTSFMMTPYVVTRY 184
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 178 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 224
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI-----NLPEWCKLITKRPDFLEVIPSSLF-- 662
D W + + PE + K P + N P++ L F ++ P SLF
Sbjct: 225 IDQWNKV-IEQLGTPCPE--FMKKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFPA 276
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 277 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 144 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 204 K-ILDFGLARTA-GTSFMMTPYVVTRY 228
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 43/160 (26%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 222 PYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPG------------RDY 268
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPI------NLPEWCKLITKRPDFLEVIPSSLF- 662
D W + + PE + K L P N P++ L F ++ P SLF
Sbjct: 269 IDQWNKV-IEQLGTPCPEFM---KKLQPTVRNYVENRPKYAGLT-----FPKLFPDSLFP 319
Query: 663 --------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++P RIS +DAL+H +
Sbjct: 320 ADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN----ELRMLERFGGKNFIIKYEGC 265
G G YG VY+A VAIK + V E+ +L+ +N II+ +
Sbjct: 43 GEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN-IIELKSV 101
Query: 266 FKCGDSDCFVLEHVKHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVKPG 323
+ E+ ++D + + K D+S ++ + Y L + H + +HRD+KP
Sbjct: 102 IHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQ 161
Query: 324 NFLFSC 329
N L S
Sbjct: 162 NLLLSV 167
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 22/141 (15%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF-GDPE-QNIKDIAKLRGSED 611
T +R PE+L S+H +DIWS + M+ +TP F GD E + I ++ G D
Sbjct: 200 TLWYRPPEILLGSRHYSTSVDIWSIAC-IWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPD 258
Query: 612 --LWE-VAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
W V L + + SFP+ + K+L + ++ DL+
Sbjct: 259 DTTWPGVTALPDWKQSFPK--FRGKTLKRV--------------LGALLDDEGLDLLTAM 302
Query: 669 LTVNPRLRISAEDALKHEFFA 689
L ++P RISA++AL+H +F+
Sbjct: 303 LEMDPVKRISAKNALEHPYFS 323
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 100 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 334 GYLIDFNLAMVGFDGSFNQATLPGTKY 360
++DF LA SF T+Y
Sbjct: 160 K-ILDFGLARTA-GTSFMMTPYVVTRY 184
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +D+WS G + ++ + F G R
Sbjct: 178 PYVVTRYYRAPEVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPG------------RDY 224
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRP-----DFLEVIPSSLF-- 662
D W + + PE + K P + + RP F ++ P LF
Sbjct: 225 IDQWNKV-IEQLGTPCPE--FMKKLQPTVR-----TYVENRPKYAGYSFEKLFPDVLFPA 276
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++ RIS ++AL+H +
Sbjct: 277 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 315
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 17/181 (9%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN-----ASKHYVSNELRMLERF 253
E F + G G +G VY AR + ++A+K +H + E+ +
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 254 GGKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALAS 309
N I++ G F +LE+ + + L + D + Y L AL+
Sbjct: 70 RHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSY 127
Query: 310 LHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNG 366
H + ++HRD+KP N L + + DF ++ S + TL GT Y+PP + G
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNG-ELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMIEG 184
Query: 367 R 367
R
Sbjct: 185 R 185
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 16/145 (11%)
Query: 210 GSGGYGTV---YRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYE 263
GSG G V Y A + + + + P N A + Y EL +++ KN II
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKN-IIGLL 89
Query: 264 GCFKCGDS-----DCF-VLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
F S D + V+E + + +V++ E+D ++ + Y + + LH GI+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 318 RDVKPGNFLFSCKAVKGYLIDFNLA 342
RD+KP N + ++DF LA
Sbjct: 150 RDLKPSNIVVKSDCTLK-ILDFGLA 173
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 41/159 (25%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +D+WS G + ++ + F G R
Sbjct: 184 PEVVTRYYRAPEVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPG------------RDY 230
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRP-----DFLEVIPSSLF-- 662
D W + + PE + K P + + RP F ++ P LF
Sbjct: 231 IDQWNKV-IEQLGTPCPE--FMKKLQPTVR-----TYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 663 -------------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++ RIS ++AL+H +
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 67 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + L GT Y+PP + GR
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTELCGTLDYLPPEMIEGR 181
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 168 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 274 FVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVK 333
V+E + + +V++ E+D ++ + Y + + LH GI+HRD+KP N +
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 334 GYLIDFNLA 342
++DF LA
Sbjct: 166 K-ILDFGLA 173
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 35/156 (22%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
P T+ +RAPEV+ ++ +DIWS G + ++ + F G R
Sbjct: 184 PEVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVCHKILFPG------------RDY 230
Query: 610 EDLWE--VAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF----- 662
D W + +L +F + L N P++ F ++ P LF
Sbjct: 231 IDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGY-----SFEKLFPDVLFPADSE 285
Query: 663 ----------DLVDKCLTVNPRLRISAEDALKHEFF 688
DL+ K L ++ RIS ++AL+H +
Sbjct: 286 HNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 28/170 (16%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N ++
Sbjct: 16 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 72
Query: 261 KYEGCFK---------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLH 311
K C S + H + E +KK ID+++ R + LH
Sbjct: 73 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFE-MKKLIDIARQT------ARGMDYLH 125
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLAMVG--FDGSFNQATLPGT 358
+ I+HRD+K N FL VK + DF LA V + GS L G+
Sbjct: 126 AKSIIHRDLKSNNIFLHEDNTVK--IGDFGLATVKSRWSGSHQFEQLSGS 173
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 67 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + L GT Y+PP + GR
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMIEGR 181
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 168 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 68 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + L GT Y+PP + GR
Sbjct: 126 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMIEGR 182
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 169 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 67 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + L GT Y+PP + GR
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTXLCGTLDYLPPEMIEGR 181
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN 599
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 168 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 67 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + L GT Y+PP + GR
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMIEGR 181
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 168 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNI 600
GT + APEVL + ++ K D+WS GV + L+ G PF G +Q+I
Sbjct: 210 GTAYYIAPEVLKKKYNE--KCDVWSCGVIMYILLCGYPPFGGQNDQDI 255
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 32/185 (17%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC-------------PHANASKHY--VSN 245
ES+ + GSG YG V + KN + AIK + N K + + N
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 246 ELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC--- 302
E+ +L+ N IIK F+ D F L ++ E+ ++ I+ + + C
Sbjct: 96 EISLLKSLDHPN-IIKLFDVFE--DKKYFYLVTEFYEGGELFEQIINRHK---FDECDAA 149
Query: 303 -----LFRALASLHKQGIVHRDVKPGNFLFSCK--AVKGYLIDFNLAMVGFDGSFNQATL 355
+ + LHK IVHRD+KP N L K + ++DF L+ F +
Sbjct: 150 NIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF-FSKDYKLRDR 208
Query: 356 PGTKY 360
GT Y
Sbjct: 209 LGTAY 213
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 72 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + L GT Y+PP + GR
Sbjct: 130 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMIEGR 186
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 173 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC---PHANASKHYVSNELRMLERFGGKN 257
E F E G G +G V++ VVAIK A + E+ +L + +
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSS 81
Query: 258 FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
++ KY G + G ++E++ L + + Q + + L LH +
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 316 VHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
+HRD+K N L S + VK L DF +A D + T GT +
Sbjct: 142 IHRDIKAANVLLSEQGDVK--LADFGVAGQLTDTQIKRNTFVGTPF 185
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 53/145 (36%), Gaps = 42/145 (28%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIA 604
Q K GT + APEV+ +S + K DIWS G+T + L G P
Sbjct: 174 QIKRNTFVGTPFWMAPEVIQQSAYDS-KADIWSLGITAIELAKGEPP------------- 219
Query: 605 KLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDL 664
+ +H F L P N P P + S +
Sbjct: 220 ----------NSDMHPMRVLF---------LIPKNNP---------PTLVGDFTKSFKEF 251
Query: 665 VDKCLTVNPRLRISAEDALKHEFFA 689
+D CL +P R +A++ LKH+F
Sbjct: 252 IDACLNKDPSFRPTAKELLKHKFIV 276
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 67 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + L GT Y+PP + GR
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRXXLCGTLDYLPPEMIEGR 181
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN 599
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 168 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK----CPHANASKHYVSNELRMLERFGGKNFIIKYEGC 265
G+G YG + RRK+DG ++ K A K + +E+ +L N + Y+
Sbjct: 15 GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRI 74
Query: 266 FKCGDSDCF-VLEHVK-HDRPEVLKKEIDLSQLQWYGYC------LFRALASLHKQG--- 314
++ + V+E+ + D V+ K Q + L AL H++
Sbjct: 75 IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGG 134
Query: 315 --IVHRDVKPGN-FLFSCKAVKGYLIDFNLA-MVGFDGSFNQATLPGTKYVPP 363
++HRD+KP N FL + VK L DF LA ++ D SF + + Y+ P
Sbjct: 135 HTVLHRDLKPANVFLDGKQNVK--LGDFGLARILNHDTSFAKTFVGTPYYMSP 185
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 70 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + L GT Y+PP + GR
Sbjct: 128 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRXXLCGTLDYLPPEMIEGR 184
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN 599
GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 171 GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK-CPHANASKHYVSNELRMLERFGGKNFIIKYEGCF-- 266
G G +G V +AR D AIK H + +E+ +L + ++++Y +
Sbjct: 15 GQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ-YVVRYYAAWLE 73
Query: 267 ----------KCGDSDCFVLEHVKHDRP--EVLKKEIDLSQLQWYGYCLFR----ALASL 310
S F+ +R +++ E +L+Q + + LFR AL+ +
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYI 132
Query: 311 HKQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLA 342
H QGI+HR++KP N F+ + VK + DF LA
Sbjct: 133 HSQGIIHRNLKPXNIFIDESRNVK--IGDFGLA 163
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 17/181 (9%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN-----ASKHYVSNELRMLERF 253
E F + G G +G VY AR + ++A+K +H + E+ +
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 254 GGKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALAS 309
N I++ G F +LE+ + + L + D + Y L AL+
Sbjct: 70 RHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSY 127
Query: 310 LHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNG 366
H + ++HRD+KP N L + + DF ++ S + TL GT Y+PP + G
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNG-ELKIADFGWSVHA--PSSRRDTLCGTLDYLPPEMIEG 184
Query: 367 R 367
R
Sbjct: 185 R 185
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
++D C GT + PE++ H K+D+WS GV ++G PF
Sbjct: 166 RRDTLC-GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGMPPF 210
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 551 CAGTKGFRAPEVLFRSQ----HQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + +PEVL +SQ + G + D WS GV L +++G TPF+ D
Sbjct: 235 AVGTPDYISPEVL-KSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 282
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 6/133 (4%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC----PHANASKHYVSNELRMLERFGGK 256
E + V + G G +G V R K V A+K S E R + F
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 134
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQG 314
++++ F+ V+E++ L D+ + ++Y + AL ++H G
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 315 IVHRDVKPGNFLF 327
++HRDVKP N L
Sbjct: 195 LIHRDVKPDNMLL 207
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 551 CAGTKGFRAPEVLFRSQ----HQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + +PEVL +SQ + G + D WS GV L +++G TPF+ D
Sbjct: 229 AVGTPDYISPEVL-KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 276
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 9/171 (5%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC----PHANASKHYVSNELRMLERFGGK 256
E + V + G G +G V R K+ V A+K S E R + F
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQG 314
++++ F+ V+E++ L D+ + ++Y + AL ++H G
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGT-KYVPP 363
+HRDVKP N L K+ L DF M + +G T GT Y+ P
Sbjct: 189 FIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 238
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+G++KK GT + APEVL + H ++DIWS G L L++G+ PF
Sbjct: 195 DGERKKT--LCGTPNYIAPEVLCKKGHSF-EVDIWSLGCILYTLLVGKPPF 242
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 27/171 (15%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKC--------PHANASKHYVSNELRMLERFGGKNFIIK 261
G GG+ Y + V A K PH K +S E+ + + + ++
Sbjct: 51 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH---QKEKMSTEIAIHKSLDNPH-VVG 106
Query: 262 YEGCFKCGDSDCFVLEHVK-------HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQG 314
+ G F+ D VLE + H R +K + + +++ + + LH
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKR----RKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGT-KYVPP 363
++HRD+K GN LF + + DF LA + FDG + TL GT Y+ P
Sbjct: 163 VIHRDLKLGN-LFLNDDMDVKIGDFGLATKIEFDGE-RKKTLCGTPNYIAP 211
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 551 CAGTKGFRAPEVLFRSQ----HQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + +PEVL +SQ + G + D WS GV L +++G TPF+ D
Sbjct: 234 AVGTPDYISPEVL-KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 9/171 (5%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC----PHANASKHYVSNELRMLERFGGK 256
E + V + G G +G V R K+ V A+K S E R + F
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQG 314
++++ F+ V+E++ L D+ + ++Y + AL ++H G
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGT-KYVPP 363
+HRDVKP N L K+ L DF M + +G T GT Y+ P
Sbjct: 194 FIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+G++KK GT + APEVL + H ++DIWS G L L++G+ PF
Sbjct: 195 DGERKKX--LCGTPNYIAPEVLCKKGHSF-EVDIWSLGCILYTLLVGKPPF 242
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 25/170 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKC--------PHANASKHYVSNELRMLERFGGKNFIIK 261
G GG+ Y + V A K PH K +S E+ + + + ++
Sbjct: 51 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH---QKEKMSTEIAIHKSLDNPH-VVG 106
Query: 262 YEGCFKCGDSDCFVLEHVK-------HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQG 314
+ G F+ D VLE + H R +K + + +++ + + LH
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKR----RKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGTKYVPP 363
++HRD+K GN LF + + DF LA + FDG + Y+ P
Sbjct: 163 VIHRDLKLGN-LFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAP 211
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 16/187 (8%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC------PHANASKHYVSNELRMLER 252
+ + F + G+G +G V+ R +++G A+K +H +N+ R++
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEH--TNDERLMLS 61
Query: 253 FGGKNFIIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALAS 309
FII+ G F+ ++++++ + +L+K ++Y + AL
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 310 LHKQGIVHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRK 368
LH + I++RD+KP N L +K + DF A D ++ P Y+ P
Sbjct: 122 LHSKDIIYRDLKPENILLDKNGHIK--ITDFGFAKYVPDVTYXLCGTP--DYIAPEVVST 177
Query: 369 VPSAKSL 375
P KS+
Sbjct: 178 KPYNKSI 184
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF 593
GT + APEV+ ++ +D WS G+ + ++ G TPF+
Sbjct: 165 GTPDYIAPEVV-STKPYNKSIDWWSFGILIYEMLAGYTPFY 204
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 195
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+ D+WS GV L+ G +PF GD +Q
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQ 223
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 195
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+ D+WS GV L+ G +PF GD +Q
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQ 223
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 77 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + + V + +IDF LA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 195
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+ D+WS GV L+ G +PF GD +Q
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQ 223
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 77 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + + V + +IDF LA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 551 CAGTKGFRAPEVLFRSQ----HQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + +PEVL +SQ + G + D WS GV L +++G TPF+ D
Sbjct: 234 AVGTPDYISPEVL-KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 9/171 (5%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC----PHANASKHYVSNELRMLERFGGK 256
E + V + G G +G V R K+ V A+K S E R + F
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQG 314
++++ F+ V+E++ L D+ + ++Y + AL ++H G
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGT-KYVPP 363
+HRDVKP N L K+ L DF M + +G T GT Y+ P
Sbjct: 194 FIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 194
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+ D+WS GV L+ G +PF GD +Q
Sbjct: 195 LEADMWSIGVITYILLSGASPFLGDTKQ 222
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 76 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 134
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + + V + +IDF LA
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 195
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+ D+WS GV L+ G +PF GD +Q
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQ 223
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 77 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + + V + +IDF LA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 194
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+ D+WS GV L+ G +PF GD +Q
Sbjct: 195 LEADMWSIGVITYILLSGASPFLGDTKQ 222
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 76 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 134
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + + V + +IDF LA
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 195
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+ D+WS GV L+ G +PF GD +Q
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQ 223
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 77 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + + V + +IDF LA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 195
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+ D+WS GV L+ G +PF GD +Q
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQ 223
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 77 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + + V + +IDF LA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 59/155 (38%), Gaps = 31/155 (20%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIK----------------------------CP 234
+ +++E G G YG V A +ND T A+K C
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 235 HANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEV---LKKEI 291
V E+ +L++ N + E + +++ + + P + K +
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPL 134
Query: 292 DLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFL 326
Q ++Y L + + LH Q I+HRD+KP N L
Sbjct: 135 SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL 169
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 552 AGTKGFRAPEVL--FRSQHQGPKLDIWSAGVTLLYLMIGRTPFF 593
GT F APE L R G LD+W+ GVTL + G+ PF
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFG 254
E F + G G +G VY AR K ++A+K +H + E+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
N I++ G F +LE+ + + L K D + Y L AL+
Sbjct: 70 HPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
H + ++HRD+KP N L A + + DF ++ S + L GT Y+PP + GR
Sbjct: 128 HSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA--PSSRRDDLCGTLDYLPPEMIEGR 184
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 546 KKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQN 599
++D C GT + PE++ H K+D+WS GV ++G+ PF + Q
Sbjct: 165 RRDDLC-GTLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANAS------KHYVSNELRMLERFGGKNFIIKYE 263
G GG+G VY+ N T VA+K A K E++++ + +N +++
Sbjct: 40 GEGGFGVVYKGYVNN--TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN-LVELL 96
Query: 264 GCFKCGDSDCFVLEHVKH----DRPEVLKKEIDLSQLQWYGYCLFRALAS-----LHKQG 314
G GD C V ++ + DR L LS W+ C A+ LH+
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS---WHMRCKIAQGAANGINFLHENH 153
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+HRD+K N L +A + DF LA
Sbjct: 154 HIHRDIKSANILLD-EAFTAKISDFGLA 180
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL + P P + I L + G + K+ GT F APE++ + G
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIV-NYEPLG 195
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+ D+WS GV L+ G +PF GD +Q
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQ 223
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVA--------IKCPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R K+ G A K S+ + E+ +L+ N
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
I +E ++ +LE V + + L ++ L++ + + + + LH I
Sbjct: 77 ITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + + V + +IDF LA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANAS------KHYVSNELRMLERFGGKNFIIKYE 263
G GG+G VY+ N T VA+K A K E++++ + +N +++
Sbjct: 40 GEGGFGVVYKGYVNN--TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN-LVELL 96
Query: 264 GCFKCGDSDCFVLEHVKH----DRPEVLKKEIDLSQLQWYGYCLFRALAS-----LHKQG 314
G GD C V ++ + DR L LS W+ C A+ LH+
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS---WHMRCKIAQGAANGINFLHENH 153
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+HRD+K N L +A + DF LA
Sbjct: 154 HIHRDIKSANILLD-EAFTAKISDFGLA 180
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 61
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D Q + +
Sbjct: 62 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFH 112
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 154
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 60
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 61 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 111
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 153
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 19 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 74
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 75 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 132
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
HRD+KP N L + + + + DF A V
Sbjct: 133 HRDLKPENILLN-EDMHIQITDFGTAKV 159
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEIXINKM 60
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 61 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 111
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 153
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 96
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 317 HRDVKPGNFLFS 328
HRD+KP N L +
Sbjct: 155 HRDLKPENILLN 166
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 60
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D Q + +
Sbjct: 61 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFH 111
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 153
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANAS------KHYVSNELRMLERFGGKNFIIKYE 263
G GG+G VY+ N T VA+K A K E++++ + +N +++
Sbjct: 34 GEGGFGVVYKGYVNN--TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN-LVELL 90
Query: 264 GCFKCGDSDCFVLEHVKH----DRPEVLKKEIDLSQLQWYGYCLFRALAS-----LHKQG 314
G GD C V ++ + DR L LS W+ C A+ LH+
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS---WHMRCKIAQGAANGINFLHENH 147
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+HRD+K N L +A + DF LA
Sbjct: 148 HIHRDIKSANILLD-EAFTAKISDFGLA 174
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 42 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 97
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 98 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 155
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
HRD+KP N L + + + + DF A V
Sbjct: 156 HRDLKPENILLN-EDMHIQITDFGTAKV 182
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEIXINKM 61
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 62 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 112
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 154
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 158 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 42 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 97
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 98 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 155
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
HRD+KP N L + + + + DF A V
Sbjct: 156 HRDLKPENILLN-EDMHIQITDFGTAKV 182
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 285 EVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLAM 343
+V K +DL+ L Y Y L ALA L + VHRD+ N L S VK L DF L+
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK--LGDFGLSR 159
Query: 344 VGFDGSFNQAT---LPGTKYVPP--VNGRKVPSA 372
D + +A+ LP K++ P +N R+ SA
Sbjct: 160 YMEDSTXXKASKGKLP-IKWMAPESINFRRFTSA 192
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 94
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 317 HRDVKPGNFLFS 328
HRD+KP N L +
Sbjct: 153 HRDLKPENILLN 164
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 96
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
HRD+KP N L + + + + DF A V
Sbjct: 155 HRDLKPENILLN-EDMHIQITDFGTAKV 181
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 18 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 73
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 74 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 131
Query: 317 HRDVKPGNFLFS 328
HRD+KP N L +
Sbjct: 132 HRDLKPENILLN 143
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 94
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
HRD+KP N L + + + + DF A V
Sbjct: 153 HRDLKPENILLN-EDMHIQITDFGTAKV 179
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 96
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 317 HRDVKPGNFLFS 328
HRD+KP N L +
Sbjct: 155 HRDLKPENILLN 166
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 94
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 317 HRDVKPGNFLFS 328
HRD+KP N L +
Sbjct: 153 HRDLKPENILLN 164
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 44 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 99
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 100 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 157
Query: 317 HRDVKPGNFLFS 328
HRD+KP N L +
Sbjct: 158 HRDLKPENILLN 169
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 96
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 317 HRDVKPGNFLFS 328
HRD+KP N L +
Sbjct: 155 HRDLKPENILLN 166
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 61
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D Q + +
Sbjct: 62 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFH 112
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 154
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 61
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D Q + +
Sbjct: 62 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFH 112
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 154
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 96
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
HRD+KP N L + + + + DF A V
Sbjct: 155 HRDLKPENILLN-EDMHIQITDFGTAKV 181
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 61
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D Q + +
Sbjct: 62 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA---QRFFH 112
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 154
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 60
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 61 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 111
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 153
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 17 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 72
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 73 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 130
Query: 317 HRDVKPGNFLFS 328
HRD+KP N L +
Sbjct: 131 HRDLKPENILLN 142
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---CPHANASKHYVSNELRMLERFGGK 256
+ + + EE G+G +G V+R + G A K PH + K V E++ +
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHP 214
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEID----LSQLQWYGYC--LFRALASL 310
++ F+ + + E + E+ +K D +S+ + Y + + L +
Sbjct: 215 T-LVNLHDAFEDDNEMVMIYEFMSGG--ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGY-LIDFNLA 342
H+ VH D+KP N +F+ K LIDF L
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLD 574
DL I+ TK LI F L ++ GT F APEV + G D
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA-EGKPVGYYTD 338
Query: 575 IWSAGVTLLYLMIGRTPFFGD 595
+WS GV L+ G +PF G+
Sbjct: 339 MWSVGVLSYILLSGLSPFGGE 359
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 16 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 71
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 72 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 129
Query: 317 HRDVKPGNFLFS 328
HRD+KP N L +
Sbjct: 130 HRDLKPENILLN 141
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---CPHANASKHYVSNELRMLERFGGK 256
+ + + EE G+G +G V+R + G A K PH + K V E++ +
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHP 108
Query: 257 NFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEID----LSQLQWYGYC--LFRALASL 310
++ F+ + + E + E+ +K D +S+ + Y + + L +
Sbjct: 109 T-LVNLHDAFEDDNEMVMIYEFMSGG--ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 311 HKQGIVHRDVKPGNFLFSCKAVKGY-LIDFNLA 342
H+ VH D+KP N +F+ K LIDF L
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 198
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLD 574
DL I+ TK LI F L ++ GT F APEV + G D
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA-EGKPVGYYTD 232
Query: 575 IWSAGVTLLYLMIGRTPFFGD 595
+WS GV L+ G +PF G+
Sbjct: 233 MWSVGVLSYILLSGLSPFGGE 253
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 305 RALASLHKQGIVHRDVKPGNFLFSC-KAVKGYLIDFNLAMVGFDG--SFNQ-ATLPGT-K 359
+AL H+ GI+HRDVKP N L S AVK ++DF +A D S Q A + GT +
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVK--VVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 360 YVPPVNGR 367
Y+ P R
Sbjct: 185 YLSPEQAR 192
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEIXINKM 60
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 61 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 111
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 153
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 70/176 (39%), Gaps = 51/176 (28%)
Query: 553 GTKGFRAPEVLFRSQHQG--PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSE 610
GT + APEVL G +D WS GV L + G PF SE
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----------------SE 221
Query: 611 DLWEVAKLHNRESSFPEDLYAAKS--LPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
H + S + + + K +P + W ++ K DLV K
Sbjct: 222 --------HRTQVSLKDQITSGKYNFIPEV----WAEVSEKA-----------LDLVKKL 258
Query: 669 LTVNPRLRISAEDALKHEFFAPCHEMLRK-QKLLRQGSSIDNTTGNPSHKQCSARP 723
L V+P+ R + E+AL+H + +M RK Q LL S + +T P Q A+P
Sbjct: 259 LVVDPKARFTTEEALRHPWLQD-EDMKRKFQDLL---SEENESTAKP---QVLAQP 307
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC---------------PHANASKHYVSN 245
+ +I+ + GSG G V A + VAIK P N V
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-----VET 64
Query: 246 ELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDR---PEVLKKEIDLSQLQWYGYC 302
E+ +L++ IIK + F D VLE ++ V K + + + Y Y
Sbjct: 65 EIEILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFS 328
+ A+ LH+ GI+HRD+KP N L S
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLS 148
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 60
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 61 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 111
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 153
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 60
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 61 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 111
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 153
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 22/161 (13%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARR---KNDGTVVAIKC-------PHANASKHYVSNE 246
+ NFE V G+G YG V+ R+ + G + A+K A ++H E
Sbjct: 53 IENFELLKVL---GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEH-TRTE 108
Query: 247 LRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVL-----KKEIDLSQLQWYGY 301
++LE F++ F+ +L+++ + E+ ++ ++Q Y
Sbjct: 109 RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYI--NGGELFTHLSQRERFTEHEVQIYVG 166
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+ AL LHK GI++RD+K N L L DF L+
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNG-HVVLTDFGLS 206
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 553 GTKGFRAPEVLFRSQHQG--PKLDIWSAGVTLLYLMIGRTPFFGDPEQN 599
GT + AP+++ R G +D WS GV + L+ G +PF D E+N
Sbjct: 222 GTIEYMAPDIV-RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN 269
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 61
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 62 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 112
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 154
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 60
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 61 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 111
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 153
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 209 EGSGGYGTVYRARRKNDGT--VVAIKCPHANASKHYVS---NELRMLERFGGKNFIIKYE 263
EG G ++Y NDGT +VA+K A+ + S E+ +L ++ IIKY+
Sbjct: 24 EGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEH-IIKYK 82
Query: 264 GCFKCGD----SDCFVLEHVKHD--RPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
GC C D S V+E+V R + + I L+QL + + +A LH Q +H
Sbjct: 83 GC--CEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIH 140
Query: 318 RDVKPGNFLF-SCKAVKGYLIDFNLA 342
R++ N L + + VK + DF LA
Sbjct: 141 RNLAARNVLLDNDRLVK--IGDFGLA 164
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+G++KK GT + APEVL + H ++D+WS G + L++G+ PF
Sbjct: 174 DGERKKT--LCGTPNYIAPEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPF 221
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK-CPHANASKHYVSNELRM---LERFGGKNFIIKYEGC 265
G GG+ + + V A K P + K + ++ M + R ++ + G
Sbjct: 30 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 89
Query: 266 FKCGDSDCFVLEHVK-------HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHR 318
F+ D VLE + H R +K + + ++Y + LH+ ++HR
Sbjct: 90 FEDNDFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNRVIHR 145
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGT-KYVPP 363
D+K GN LF + ++ + DF LA V +DG + TL GT Y+ P
Sbjct: 146 DLKLGN-LFLNEDLEVKIGDFGLATKVEYDGE-RKKTLCGTPNYIAP 190
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+G++KK GT + APEVL + H ++D+WS G + L++G+ PF
Sbjct: 170 DGERKKT--LCGTPNYIAPEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPF 217
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK-CPHANASKHYVSNELRM---LERFGGKNFIIKYEGC 265
G GG+ + + V A K P + K + ++ M + R ++ + G
Sbjct: 26 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 266 FKCGDSDCFVLEHVK-------HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHR 318
F+ D VLE + H R +K + + ++Y + LH+ ++HR
Sbjct: 86 FEDNDFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGT-KYVPP 363
D+K GN LF + ++ + DF LA V +DG + TL GT Y+ P
Sbjct: 142 DLKLGN-LFLNEDLEVKIGDFGLATKVEYDGE-RKKTLCGTPNYIAP 186
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 60
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 61 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 111
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 153
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 23 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 78
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 79 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 136
Query: 317 HRDVKPGNFLFS 328
HRD+KP N L +
Sbjct: 137 HRDLKPENILLN 148
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 14/133 (10%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLER-----FGGKNFIIKYEG 264
G G +G V A RK + AIK + E M+E+ F+ +
Sbjct: 28 GKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHS 87
Query: 265 CFKCGDSDCFVLEHVK------HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHR 318
CF+ D FV+E+V H + KE Q +Y + L LHK+GI++R
Sbjct: 88 CFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE---PQAVFYAAEISIGLFFLHKRGIIYR 144
Query: 319 DVKPGNFLFSCKA 331
D+K N + +
Sbjct: 145 DLKLDNVMLDSEG 157
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNI 600
GT + APE++ Q G +D W+ GV L ++ G+ PF G+ E +
Sbjct: 181 CGTPDYIAPEII-AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+G++KK GT + APEVL + H ++D+WS G + L++G+ PF
Sbjct: 170 DGERKKT--LCGTPNYIAPEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPF 217
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK-CPHANASKHYVSNELRM---LERFGGKNFIIKYEGC 265
G GG+ + + V A K P + K + ++ M + R ++ + G
Sbjct: 26 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 266 FKCGDSDCFVLEHVK-------HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHR 318
F+ D VLE + H R +K + + ++Y + LH+ ++HR
Sbjct: 86 FEDNDFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGT-KYVPP 363
D+K GN LF + ++ + DF LA V +DG + TL GT Y+ P
Sbjct: 142 DLKLGN-LFLNEDLEVKIGDFGLATKVEYDGE-RKKTLCGTPNYIAP 186
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK---CPHANASKHYVSNELRMLERFGGKNFIIKYEGCF 266
G GG+G V+ A+ K D AIK P+ ++ V E++ L + + +
Sbjct: 14 GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWL 73
Query: 267 KCGDSD--------CFVLEHVKHDRPEVLKKEID---LSQLQWYGYCLF------RALAS 309
+ ++ ++ ++ R E LK ++ + + CL A+
Sbjct: 74 EKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEF 133
Query: 310 LHKQGIVHRDVKPGNFLFSCKAV 332
LH +G++HRD+KP N F+ V
Sbjct: 134 LHSKGLMHRDLKPSNIFFTMDDV 156
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 209 EGSGGYGTVYRARRKNDGT--VVAIKCPHANASKHYVS---NELRMLERFGGKNFIIKYE 263
EG G ++Y NDGT +VA+K A+ + S E+ +L ++ IIKY+
Sbjct: 24 EGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEH-IIKYK 82
Query: 264 GCFKCGD----SDCFVLEHVKHD--RPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
GC C D S V+E+V R + + I L+QL + + +A LH Q +H
Sbjct: 83 GC--CEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIH 140
Query: 318 RDVKPGNFLF-SCKAVKGYLIDFNLA 342
R++ N L + + VK + DF LA
Sbjct: 141 RNLAARNVLLDNDRLVK--IGDFGLA 164
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 210 GSGGYGTVYRAR---RKNDGTVVAIKCPHANASKHYVSNELRM-LER--FGGKN--FIIK 261
G G +G V+ R R + G + A+K K V + +R +ER N F++K
Sbjct: 37 GQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLK--VRDRVRTKMERDILADVNHPFVVK 94
Query: 262 YEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHR 318
F+ +L+ ++ D L KE+ ++ +++Y L L LH GI++R
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYR 154
Query: 319 DVKPGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP 363
D+KP N L + +K L DF L+ D + GT +Y+ P
Sbjct: 155 DLKPENILLDEEGHIK--LTDFGLSKEAIDHEKKAYSFCGTVEYMAP 199
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG 594
+KK GT + APEV+ R H D WS GV + ++ G PF G
Sbjct: 184 EKKAYSFCGTVEYMAPEVVNRQGHSHSA-DWWSYGVLMFEMLTGSLPFQG 232
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 38 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 93
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 94 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 151
Query: 317 HRDVKPGNFLFS 328
HRD+KP N L +
Sbjct: 152 HRDLKPENILLN 163
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF-FGDPEQNIKDIAKLRGSE 610
T+ +RAPEV+ P D+WS G + +G T F D +++ + ++ G
Sbjct: 214 VSTRHYRAPEVILELGWSQP-CDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPI 272
Query: 611 DLWEVAKLHNRESSFPEDL-YAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
+ K ++ + L + + + E CK + + LFDL++ L
Sbjct: 273 PSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLIESML 332
Query: 670 TVNPRLRISAEDALKHEFFA 689
P R++ +AL+H FFA
Sbjct: 333 EYEPAKRLTLGEALQHPFFA 352
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 60
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 61 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 111
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 153
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 60
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 61 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 111
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 153
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 61
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 62 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 112
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 154
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 38 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 93
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 94 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 151
Query: 317 HRDVKPGNFLFS 328
HRD+KP N L +
Sbjct: 152 HRDLKPENILLN 163
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 198 PNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNELR 248
P E + + + G G YG V A + VA+K CP N K N++
Sbjct: 2 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKML 60
Query: 249 MLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGYC 302
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 61 NHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQ 111
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 LMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 152
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 156 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N ++
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 261 KYEGCFK---------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLH 311
K C S + H + E +KK ID+++ R + LH
Sbjct: 85 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFE-MKKLIDIARQT------ARGMDYLH 137
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLA 342
+ I+HRD+K N FL VK + DF LA
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVK--IGDFGLA 167
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 67/171 (39%), Gaps = 48/171 (28%)
Query: 553 GTKGFRAPEVLFRSQHQG--PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSE 610
GT + APEVL G +D WS GV L + G PF SE
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----------------SE 221
Query: 611 DLWEVAKLHNRESSFPEDLYAAKS--LPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
H + S + + + K +P + W ++ K DLV K
Sbjct: 222 --------HRTQVSLKDQITSGKYNFIPEV----WAEVSEKA-----------LDLVKKL 258
Query: 669 LTVNPRLRISAEDALKHEFFAPCHEMLRK-QKLL---RQGSSIDNTTGNPS 715
L V+P+ R + E+AL+H + +M RK Q LL + +++ PS
Sbjct: 259 LVVDPKARFTTEEALRHPWLQD-EDMKRKFQDLLSEENESTALPQVLAQPS 308
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC----PHANASKHY------VSNELRML 250
+ +I+ + GSG G V A + VAIK A S V E+ +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 251 ERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDR---PEVLKKEIDLSQLQWYGYCLFRAL 307
++ IIK + F D VLE ++ V K + + + Y Y + A+
Sbjct: 70 KKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 308 ASLHKQGIVHRDVKPGNFLFS 328
LH+ GI+HRD+KP N L S
Sbjct: 128 QYLHENGIIHRDLKPENVLLS 148
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 67/171 (39%), Gaps = 48/171 (28%)
Query: 553 GTKGFRAPEVLFRSQHQG--PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSE 610
GT + APEVL G +D WS GV L + G PF SE
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----------------SE 221
Query: 611 DLWEVAKLHNRESSFPEDLYAAKS--LPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
H + S + + + K +P + W ++ K DLV K
Sbjct: 222 --------HRTQVSLKDQITSGKYNFIPEV----WAEVSEKA-----------LDLVKKL 258
Query: 669 LTVNPRLRISAEDALKHEFFAPCHEMLRK-QKLL---RQGSSIDNTTGNPS 715
L V+P+ R + E+AL+H + +M RK Q LL + +++ PS
Sbjct: 259 LVVDPKARFTTEEALRHPWLQD-EDMKRKFQDLLSEENESTALPQVLAQPS 308
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC---------------PHANASKHYVSN 245
+ +I+ + GSG G V A + VAIK P N V
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-----VET 64
Query: 246 ELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDR---PEVLKKEIDLSQLQWYGYC 302
E+ +L++ IIK + F D VLE ++ V K + + + Y Y
Sbjct: 65 EIEILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFS 328
+ A+ LH+ GI+HRD+KP N L S
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLS 148
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 67/171 (39%), Gaps = 48/171 (28%)
Query: 553 GTKGFRAPEVLFRSQHQG--PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSE 610
GT + APEVL G +D WS GV L + G PF SE
Sbjct: 184 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----------------SE 227
Query: 611 DLWEVAKLHNRESSFPEDLYAAKS--LPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
H + S + + + K +P + W ++ K DLV K
Sbjct: 228 --------HRTQVSLKDQITSGKYNFIPEV----WAEVSEKA-----------LDLVKKL 264
Query: 669 LTVNPRLRISAEDALKHEFFAPCHEMLRK-QKLL---RQGSSIDNTTGNPS 715
L V+P+ R + E+AL+H + +M RK Q LL + +++ PS
Sbjct: 265 LVVDPKARFTTEEALRHPWLQD-EDMKRKFQDLLSEENESTALPQVLAQPS 314
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC---------------PHANASKHYVSN 245
+ +I+ + GSG G V A + VAIK P N V
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-----VET 70
Query: 246 ELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDR---PEVLKKEIDLSQLQWYGYC 302
E+ +L++ IIK + F D VLE ++ V K + + + Y Y
Sbjct: 71 EIEILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFS 328
+ A+ LH+ GI+HRD+KP N L S
Sbjct: 129 MLLAVQYLHENGIIHRDLKPENVLLS 154
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 67/171 (39%), Gaps = 48/171 (28%)
Query: 553 GTKGFRAPEVLFRSQHQG--PKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSE 610
GT + APEVL G +D WS GV L + G PF SE
Sbjct: 177 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----------------SE 220
Query: 611 DLWEVAKLHNRESSFPEDLYAAKS--LPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC 668
H + S + + + K +P + W ++ K DLV K
Sbjct: 221 --------HRTQVSLKDQITSGKYNFIPEV----WAEVSEKA-----------LDLVKKL 257
Query: 669 LTVNPRLRISAEDALKHEFFAPCHEMLRK-QKLL---RQGSSIDNTTGNPS 715
L V+P+ R + E+AL+H + +M RK Q LL + +++ PS
Sbjct: 258 LVVDPKARFTTEEALRHPWLQD-EDMKRKFQDLLSEENESTALPQVLAQPS 307
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC---------------PHANASKHYVSN 245
+ +I+ + GSG G V A + VAIK P N V
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-----VET 63
Query: 246 ELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDR---PEVLKKEIDLSQLQWYGYC 302
E+ +L++ IIK + F D VLE ++ V K + + + Y Y
Sbjct: 64 EIEILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFS 328
+ A+ LH+ GI+HRD+KP N L S
Sbjct: 122 MLLAVQYLHENGIIHRDLKPENVLLS 147
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 65/162 (40%), Gaps = 21/162 (12%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC----PHANASKHY--VSNELRMLER 252
+F +EE G GG+G VYRA D VA+K P + S+ V E ++
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 253 FGGKNFIIKYEGCFKCGDSDCFVLEHVKHD-RPEVLK-KEIDLSQLQWYGYCLFRALASL 310
N I C K + C V+E + VL K I L + + R + L
Sbjct: 63 LKHPNIIALRGVCLK-EPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYL 121
Query: 311 HKQGIV---HRDVKPGNFLFSCKAVKGYL-------IDFNLA 342
H + IV HRD+K N L K G L DF LA
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 551 CAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG 594
AG + APEV+ R+ D+WS GV L L+ G PF G
Sbjct: 174 AAGAYAWMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G YG V A + VA+K CP N K N +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINAM 61
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 62 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 112
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 154
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 305 RALASLHKQGIVHRDVKPGNFLFSC-KAVKGYLIDFNLAMVGFDG--SFNQ-ATLPGT-K 359
+AL H+ GI+HRDVKP N + S AVK ++DF +A D S Q A + GT +
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVK--VMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 360 YVPPVNGR 367
Y+ P R
Sbjct: 185 YLSPEQAR 192
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 58/155 (37%), Gaps = 41/155 (26%)
Query: 552 AGTKGFRAPEVLFRSQHQGPK--LDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
GT + APEVL G +D WS GV L + G PF S
Sbjct: 316 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----------------S 359
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
E H + S + + + K P+ + DLV K L
Sbjct: 360 E--------HRTQVSLKDQITSGK-------------YNFIPEVWAEVSEKALDLVKKLL 398
Query: 670 TVNPRLRISAEDALKHEFFAPCHEMLRK-QKLLRQ 703
V+P+ R + E+AL+H + +M RK Q LL +
Sbjct: 399 VVDPKARFTTEEALRHPWLQD-EDMKRKFQDLLSE 432
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 299 YGYCLFRALASLHKQGIVHRDVKPGNFLFS 328
Y Y + A+ LH+ GI+HRD+KP N L S
Sbjct: 258 YFYQMLLAVQYLHENGIIHRDLKPENVLLS 287
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+G++KK GT + APEVL + H ++D+WS G + L++G+ PF
Sbjct: 192 DGERKKV--LCGTPNYIAPEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPF 239
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 17/166 (10%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK-CPHANASKHYVSNELRM---LERFGGKNFIIKYEGC 265
G GG+ + + V A K P + K + ++ M + R ++ + G
Sbjct: 48 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 107
Query: 266 FKCGDSDCFVLEHVK-------HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHR 318
F+ D VLE + H R +K + + ++Y + LH+ ++HR
Sbjct: 108 FEDNDFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNRVIHR 163
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGTKYVPP 363
D+K GN LF + ++ + DF LA V +DG + Y+ P
Sbjct: 164 DLKLGN-LFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 208
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 58/155 (37%), Gaps = 41/155 (26%)
Query: 552 AGTKGFRAPEVLFRSQHQGPK--LDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGS 609
GT + APEVL G +D WS GV L + G PF S
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----------------S 345
Query: 610 EDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL 669
E H + S + + + K P+ + DLV K L
Sbjct: 346 E--------HRTQVSLKDQITSGK-------------YNFIPEVWAEVSEKALDLVKKLL 384
Query: 670 TVNPRLRISAEDALKHEFFAPCHEMLRK-QKLLRQ 703
V+P+ R + E+AL+H + +M RK Q LL +
Sbjct: 385 VVDPKARFTTEEALRHPWLQD-EDMKRKFQDLLSE 418
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 299 YGYCLFRALASLHKQGIVHRDVKPGNFLFS 328
Y Y + A+ LH+ GI+HRD+KP N L S
Sbjct: 244 YFYQMLLAVQYLHENGIIHRDLKPENVLLS 273
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+G++KK GT + APEVL + H ++D+WS G + L++G+ PF
Sbjct: 194 DGERKKV--LCGTPNYIAPEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPF 241
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 17/166 (10%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK-CPHANASKHYVSNELRM---LERFGGKNFIIKYEGC 265
G GG+ + + V A K P + K + ++ M + R ++ + G
Sbjct: 50 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 109
Query: 266 FKCGDSDCFVLEHVK-------HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHR 318
F+ D VLE + H R +K + + ++Y + LH+ ++HR
Sbjct: 110 FEDNDFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNRVIHR 165
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGTKYVPP 363
D+K GN LF + ++ + DF LA V +DG + Y+ P
Sbjct: 166 DLKLGN-LFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 210
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 305 RALASLHKQGIVHRDVKPGNFLFSC-KAVKGYLIDFNLAMVGFDG--SFNQ-ATLPGT-K 359
+AL H+ GI+HRDVKP N + S AVK ++DF +A D S Q A + GT +
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVK--VMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 360 YVPPVNGR 367
Y+ P R
Sbjct: 185 YLSPEQAR 192
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 305 RALASLHKQGIVHRDVKPGNFLFSC-KAVKGYLIDFNLAMVGFDG--SFNQ-ATLPGT-K 359
+AL H+ GI+HRDVKP N + S AVK ++DF +A D S Q A + GT +
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVK--VMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 360 YVPPVNGR 367
Y+ P R
Sbjct: 185 YLSPEQAR 192
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 305 RALASLHKQGIVHRDVKPGNFLFSC-KAVKGYLIDFNLAMVGFDG--SFNQ-ATLPGT-K 359
+AL H+ GI+HRDVKP N + S AVK ++DF +A D S Q A + GT +
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVK--VMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 360 YVPPVNGR 367
Y+ P R
Sbjct: 185 YLSPEQAR 192
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N ++
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 261 KYEGCFK---------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLH 311
K C S + H+ + E++K ID+++ G + LH
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQG------MDYLH 149
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLAMVG--FDGSFNQATLPGT 358
+ I+HRD+K N FL VK + DF LA V + GS L G+
Sbjct: 150 AKSIIHRDLKSNNIFLHEDLTVK--IGDFGLATVKSRWSGSHQFEQLSGS 197
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK----CPHANASKHYVSNELRMLERFGGKNFIIKYEGC 265
G+G YG + RRK+DG ++ K A K + +E+ +L N + Y+
Sbjct: 15 GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRI 74
Query: 266 FKCGDSDCF-VLEHVK-HDRPEVLKKEIDLSQLQWYGYC------LFRALASLHKQG--- 314
++ + V+E+ + D V+ K Q + L AL H++
Sbjct: 75 IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGG 134
Query: 315 --IVHRDVKPGN-FLFSCKAVKGYLIDFNLA-MVGFDGSFNQATLPGTKYVPP 363
++HRD+KP N FL + VK L DF LA ++ D F + + Y+ P
Sbjct: 135 HTVLHRDLKPANVFLDGKQNVK--LGDFGLARILNHDEDFAKEFVGTPYYMSP 185
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
+G++KK GT + APEVL + H ++D+WS G + L++G+ PF
Sbjct: 168 DGERKK--VLCGTPNYIAPEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPF 215
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 17/166 (10%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK-CPHANASKHYVSNELRM---LERFGGKNFIIKYEGC 265
G GG+ + + V A K P + K + ++ M + R ++ + G
Sbjct: 24 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 83
Query: 266 FKCGDSDCFVLEHVK-------HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHR 318
F+ D VLE + H R +K + + ++Y + LH+ ++HR
Sbjct: 84 FEDNDFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNRVIHR 139
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAM-VGFDGSFNQATLPGTKYVPP 363
D+K GN LF + ++ + DF LA V +DG + Y+ P
Sbjct: 140 DLKLGN-LFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 184
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N ++
Sbjct: 39 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 95
Query: 261 KYEGCFK---------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLH 311
K C S + H+ + E++K ID+++ G + LH
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQG------MDYLH 148
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLAMVG--FDGSFNQATLPGT 358
+ I+HRD+K N FL VK + DF LA V + GS L G+
Sbjct: 149 AKSIIHRDLKSNNIFLHEDLTVK--IGDFGLATVKSRWSGSHQFEQLSGS 196
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 28/159 (17%)
Query: 554 TKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLM----------IGRTPFFG-------DP 596
T+ +RAPE++ ++ +D+WS G L+ R P F P
Sbjct: 246 TRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSP 305
Query: 597 EQNIKDIAKL--RGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKR--PD 652
+Q + K RG+ D V + + ED+ A L + + ++ KR D
Sbjct: 306 DQKAGNDFKFHTRGNRDQLNVI-FNILGTPSEEDIEA---LEKEDAKRYIRIFPKREGTD 361
Query: 653 FLEVIPSSLFD---LVDKCLTVNPRLRISAEDALKHEFF 688
E P+S D L+ + L NP RI+ + L H FF
Sbjct: 362 LAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 27/151 (17%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK-----------CPHANASKHYVSNELRMLERFGGKNF 258
G+G YG V A K + VVAIK C + E+ +L R +
Sbjct: 62 GTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKR-------ILREIAILNRLN-HDH 113
Query: 259 IIKYEGCFKCGDSDCF-----VLEHVKHDRPEVLKKEIDLSQLQWYG--YCLFRALASLH 311
++K D + F VLE D ++ + + L++L Y L + +H
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH 173
Query: 312 KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
GI+HRD+KP N L + + + DF LA
Sbjct: 174 SAGILHRDLKPANCLVN-QDCSVKVCDFGLA 203
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N ++
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 261 KYEGCFK---------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLH 311
K C S + H+ + E++K ID+++ G + LH
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQG------MDYLH 126
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLAMVG--FDGSFNQATLPGT 358
+ I+HRD+K N FL VK + DF LA V + GS L G+
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLTVK--IGDFGLATVKSRWSGSHQFEQLSGS 174
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N ++
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 261 KYEGCFK---------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLH 311
K C S + H+ + E++K ID+++ G + LH
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQG------MDYLH 126
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLAMVG--FDGSFNQATLPGT 358
+ I+HRD+K N FL VK + DF LA V + GS L G+
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLTVK--IGDFGLATVKSRWSGSHQFEQLSGS 174
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 63/149 (42%), Gaps = 22/149 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKC---PHANASKHYVSNELRMLERFGGKNFIIKYEGCF 266
G GG+G VY+ R DGT+VA+K + E+ M+ +N +++ G
Sbjct: 47 GRGGFGKVYKGRLA-DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRN-LLRLRGFC 104
Query: 267 KCGDSDCFVLEHVKH--------DRPEVLKKEIDLSQLQWYGYCLFRALASLHKQ---GI 315
V ++ + +RPE + +D + Q R LA LH I
Sbjct: 105 MTPTERLLVYPYMANGSVASCLRERPES-QPPLDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 316 VHRDVKPGNFLF--SCKAVKGYLIDFNLA 342
+HRDVK N L +AV G DF LA
Sbjct: 164 IHRDVKAANILLDEEFEAVVG---DFGLA 189
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 305 RALASLHKQGIVHRDVKPGNFLFSC-KAVKGYLIDFNLAMVGFDG--SFNQ-ATLPGT-K 359
+AL H+ GI+HRDVKP N + S AVK ++DF +A D S Q A + GT +
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVK--VMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 360 YVPPVNGR 367
Y+ P R
Sbjct: 202 YLSPEQAR 209
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N ++
Sbjct: 14 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 70
Query: 261 KYEGCFK---------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLH 311
K C S + H+ + E++K ID+++ G + LH
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQG------MDYLH 123
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLAMVG--FDGSFNQATLPGT 358
+ I+HRD+K N FL VK + DF LA V + GS L G+
Sbjct: 124 AKSIIHRDLKSNNIFLHEDLTVK--IGDFGLATVKSRWSGSHQFEQLSGS 171
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 20/148 (13%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + T AR AIK +H YV+ E ++ R F +K
Sbjct: 39 GEGSFSTTVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 94
Query: 262 YEGCFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIV 316
F+ + F L + K+ E+LK D + ++Y + AL LH +GI+
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
HRD+KP N L + + + + DF A V
Sbjct: 153 HRDLKPENILLN-EDMHIQITDFGTAKV 179
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 23/168 (13%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHAN-----ASKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G VY AR K + ++A+K + +H + E+ + N I++
Sbjct: 23 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN-ILRMYN 81
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIVHRD 319
F +LE R E+ K+ D + + L AL H++ ++HRD
Sbjct: 82 YFHDRKRIYLMLEFAP--RGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRD 139
Query: 320 VKPGNFLFSCKAVKGYLIDFNLAMVGFD---GSFNQATLPGT-KYVPP 363
+KP N L GY + +A G+ S + + GT Y+PP
Sbjct: 140 IKPENLLM------GYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPP 181
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
GT + PE++ H K+D+W AGV ++G PF
Sbjct: 174 GTLDYLPPEMIEGKTHDE-KVDLWCAGVLCYEFLVGMPPF 212
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N ++
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 261 KYEGCFK---------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLH 311
K C S + H+ + E++K ID+++ G + LH
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQG------MDYLH 121
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLAMVG--FDGSFNQATLPGT 358
+ I+HRD+K N FL VK + DF LA V + GS L G+
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVK--IGDFGLATVKSRWSGSHQFEQLSGS 169
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 109/291 (37%), Gaps = 61/291 (20%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN--ASKHYVSNELRMLERFGGK 256
NF+ F + G G +G V ++ + + A+K + ++ V N + L+ G
Sbjct: 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 257 N--FIIKYEGCFKCGDSDCFV-------------LEHVKHDRPEVLKKEIDLSQLQWYGY 301
F++ F+ + D F+ L+ H + E +K I
Sbjct: 73 EHPFLVNLWYSFQ-DEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI---------- 121
Query: 302 C-LFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
C L AL L Q I+HRD+KP N L ++ DFN+A A LP
Sbjct: 122 CELVMALDYLQNQRIIHRDMKPDNILLDEHG-HVHITDFNIA----------AMLPRETQ 170
Query: 361 VPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADG 420
+ + G K A + + +RKG+ + D S + + G
Sbjct: 171 ITTMAGTKPYMAPEMFS----SRKGAGY-------------SFAVDWWSLGVTAYELLRG 213
Query: 421 SGITSAKEATSTRTPAERLREPL---PCQGRKELISLLQKALR-NPNYEAS 467
+ +TS++ + P +E++SLL+K L NP+ S
Sbjct: 214 RRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 552 AGTKGFRAPEVLFRSQHQGPK--LDIWSAGVTLLYLMIGRTPF 592
AGTK + APE+ + G +D WS GVT L+ GR P+
Sbjct: 175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 23/168 (13%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHAN-----ASKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G VY AR K + ++A+K + +H + E+ + N I++
Sbjct: 24 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN-ILRMYN 82
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIVHRD 319
F +LE R E+ K+ D + + L AL H++ ++HRD
Sbjct: 83 YFHDRKRIYLMLEFAP--RGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRD 140
Query: 320 VKPGNFLFSCKAVKGYLIDFNLAMVGFD---GSFNQATLPGT-KYVPP 363
+KP N L GY + +A G+ S + + GT Y+PP
Sbjct: 141 IKPENLLM------GYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPP 182
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
GT + PE++ H K+D+W AGV ++G PF
Sbjct: 175 GTLDYLPPEMIEGKTHDE-KVDLWCAGVLCYEFLVGMPPF 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 23/168 (13%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHAN-----ASKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G VY AR K + ++A+K + +H + E+ + N I++
Sbjct: 23 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN-ILRMYN 81
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIVHRD 319
F +LE R E+ K+ D + + L AL H++ ++HRD
Sbjct: 82 YFHDRKRIYLMLEFAP--RGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRD 139
Query: 320 VKPGNFLFSCKAVKGYLIDFNLAMVGFD---GSFNQATLPGT-KYVPP 363
+KP N L GY + +A G+ S + + GT Y+PP
Sbjct: 140 IKPENLLM------GYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPP 181
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
GT + PE++ H K+D+W AGV ++G PF
Sbjct: 174 GTLDYLPPEMIEGKTHDE-KVDLWCAGVLCYEFLVGMPPF 212
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 542 NGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
N +++ GT + APE+L R + +D+WS G+ L ++ G P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 26/163 (15%)
Query: 197 LPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK---------CPHANASKHYVSNEL 247
+P E + + + G G G V A + VA+K CP N K N++
Sbjct: 2 VPFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKM 60
Query: 248 RMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK----HDR--PEVLKKEIDLSQLQWYGY 301
E ++K+ G + G+ LE+ DR P++ E D + + +
Sbjct: 61 LNHEN------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFH 111
Query: 302 CLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
L + LH GI HRD+KP N L + + DF LA V
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATV 153
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 258 FIIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQG 314
FI+K F+ +L+ ++ D L KE+ ++ +++Y L AL LH G
Sbjct: 88 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 147
Query: 315 IVHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
I++RD+KP N L + +K L DF L+ D + GT +Y+ P VN R
Sbjct: 148 IIYRDLKPENILLDEEGHIK--LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDI 603
+KK GT + APEV+ R H D WS GV + ++ G PF G D ++ + I
Sbjct: 181 EKKAYSFCGTVEYMAPEVVNRRGHTQSA-DWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 239
Query: 604 AK 605
K
Sbjct: 240 LK 241
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 258 FIIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQG 314
FI+K F+ +L+ ++ D L KE+ ++ +++Y L AL LH G
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 315 IVHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
I++RD+KP N L + +K L DF L+ D + GT +Y+ P VN R
Sbjct: 147 IIYRDLKPENILLDEEGHIK--LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG-DPEQNIKDI 603
+KK GT + APEV+ R H D WS GV + ++ G PF G D ++ + I
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSA-DWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
Query: 604 AK 605
K
Sbjct: 239 LK 240
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 17/189 (8%)
Query: 188 NDDQTNAKVLPNFESFIVEEEEGSGGYGT-VYRARRKNDGTVVAIKCPHANASKHYVSNE 246
+ D+ + V+ SF ++ G G GT VYR N V P + + E
Sbjct: 11 DGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADRE 67
Query: 247 LRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFR- 305
+++L +I+Y K +E E ++++ D + L L +
Sbjct: 68 VQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQK-DFAHLGLEPITLLQQ 126
Query: 306 ---ALASLHKQGIVHRDVKPGNFLFSC----KAVKGYLIDFNLA---MVGFDGSFNQATL 355
LA LH IVHRD+KP N L S +K + DF L VG ++ +
Sbjct: 127 TTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 356 PGTK-YVPP 363
PGT+ ++ P
Sbjct: 187 PGTEGWIAP 195
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 40/153 (26%)
Query: 538 LLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPK--LDIWSAGVTLLYLMIGRTPFFGD 595
L +G + GT+G+ APE+L + P +DI+SAG Y++ + FG
Sbjct: 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232
Query: 596 PEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLE 655
Q +I L A SL ++ PE + + R
Sbjct: 233 SLQRQANI-------------------------LLGACSLDCLH-PEKHEDVIAR----- 261
Query: 656 VIPSSLFDLVDKCLTVNPRLRISAEDALKHEFF 688
+L++K + ++P+ R SA+ LKH FF
Sbjct: 262 -------ELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 258 FIIKYEGCFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQG 314
FI+K F+ +L+ ++ D L KE+ ++ +++Y L AL LH G
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 315 IVHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
I++RD+KP N L + +K L DF L+ D + GT +Y+ P VN R
Sbjct: 147 IIYRDLKPENILLDEEGHIK--LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG 594
+KK GT + APEV+ R H D WS GV + ++ G PF G
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSA-DWWSFGVLMFEMLTGTLPFQG 228
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 22/148 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANAS------KHYVSNELRMLERFGGKNFIIKYE 263
G GG+G VY+ N T VA+K A K E+++ + +N +++
Sbjct: 31 GEGGFGVVYKGYVNN--TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHEN-LVELL 87
Query: 264 GCFKCGDSDCFVLEHVKH----DRPEVLKKEIDLSQLQWYGYCLFRALAS-----LHKQG 314
G GD C V + + DR L LS W+ C A+ LH+
Sbjct: 88 GFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLS---WHXRCKIAQGAANGINFLHENH 144
Query: 315 IVHRDVKPGNFLFSCKAVKGYLIDFNLA 342
+HRD+K N L +A + DF LA
Sbjct: 145 HIHRDIKSANILLD-EAFTAKISDFGLA 171
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 56/158 (35%), Gaps = 50/158 (31%)
Query: 557 FRAPEVLFRSQHQ----GPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDL 612
F APE HQ D+WS G + L+ G PF + Q I
Sbjct: 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI------------ 211
Query: 613 WEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN 672
+ + N E +F E+ + S+ + D VD+ L
Sbjct: 212 --IENIMNAEYTFDEEAFKEISIEAM------------------------DFVDRLLVKE 245
Query: 673 PRLRISAEDALKHEFFAPCHEMLRKQKLLRQGSSIDNT 710
+ R++A +AL+H + KQK+ R + + T
Sbjct: 246 RKSRMTASEALQHPWL--------KQKIERVSTKVIRT 275
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 200 FESFIVEEEEGSGGYGTVYR-ARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNF 258
+E +++ E+ G G +G V+R + T +A + V E+ +L +N
Sbjct: 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRN- 62
Query: 259 IIKYEGCFKCGDSDCFVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQG 314
I+ F+ + + E + +R E++ ++ Y + + AL LH
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 315 IVHRDVKPGNFLFSCK 330
I H D++P N ++ +
Sbjct: 123 IGHFDIRPENIIYQTR 138
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N ++
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 261 KYEGCFK----------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
+ G C S + H + E +KK ID+++ R + L
Sbjct: 85 -FMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFE-MKKLIDIARQT------ARGMDYL 136
Query: 311 HKQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLA 342
H + I+HRD+K N FL VK + DF LA
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVK--IGDFGLA 167
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 552 AGTKGFRAPEVLFRSQHQGPK------LDIWSAGVTLLYLMI-GRTPFFGDPEQNIKDIA 604
+GT G+RAPE+L S + K +DI+S G Y++ G+ P FGD +I
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP-FGDKYSRESNI- 250
Query: 605 KLRGSEDLWEVAKLHNR 621
+RG L E+ LH+R
Sbjct: 251 -IRGIFSLDEMKCLHDR 266
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 552 AGTKGFRAPEVLFRSQHQGPK------LDIWSAGVTLLYLMI-GRTPFFGDPEQNIKDIA 604
+GT G+RAPE+L S + K +DI+S G Y++ G+ P FGD +I
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP-FGDKYSRESNI- 250
Query: 605 KLRGSEDLWEVAKLHNR 621
+RG L E+ LH+R
Sbjct: 251 -IRGIFSLDEMKCLHDR 266
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC---PHANASKHYVSNELRMLERFGGKN 257
E F E+ G G +G V++ VVAIK A + E+ +L +
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP- 85
Query: 258 FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE--IDLSQLQWYGYCLFRALASLHKQGI 315
++ KY G + ++E++ L + +D +Q+ + + L LH +
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 316 VHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
+HRD+K N L S VK L DF +A D + T GT +
Sbjct: 146 IHRDIKAANVLLSEHGEVK--LADFGVAGQLTDTQIKRNTFVGTPF 189
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 55/144 (38%), Gaps = 42/144 (29%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIA 604
Q K GT + APEV+ +S + K DIWS G+T + L G P
Sbjct: 178 QIKRNTFVGTPFWMAPEVIKQSAYDS-KADIWSLGITAIELARGEPPH------------ 224
Query: 605 KLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDL 664
++LH + F L P N P + +P L +
Sbjct: 225 -----------SELHPMKVLF---------LIPKNNPPTLEGNYSKP---------LKEF 255
Query: 665 VDKCLTVNPRLRISAEDALKHEFF 688
V+ CL P R +A++ LKH+F
Sbjct: 256 VEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC---PHANASKHYVSNELRMLERFGGKN 257
E F E+ G G +G V++ VVAIK A + E+ +L +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP- 65
Query: 258 FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE--IDLSQLQWYGYCLFRALASLHKQGI 315
++ KY G + ++E++ L + +D +Q+ + + L LH +
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 316 VHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
+HRD+K N L S VK L DF +A D + T GT +
Sbjct: 126 IHRDIKAANVLLSEHGEVK--LADFGVAGQLTDTQIKRNTFVGTPF 169
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 55/144 (38%), Gaps = 42/144 (29%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIA 604
Q K GT + APEV+ +S + K DIWS G+T + L G P
Sbjct: 158 QIKRNTFVGTPFWMAPEVIKQSAYDS-KADIWSLGITAIELARGEPPH------------ 204
Query: 605 KLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDL 664
++LH + F L P N P + +P L +
Sbjct: 205 -----------SELHPMKVLF---------LIPKNNPPTLEGNYSKP---------LKEF 235
Query: 665 VDKCLTVNPRLRISAEDALKHEFF 688
V+ CL P R +A++ LKH+F
Sbjct: 236 VEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL K P P + + + + G + K+ GT F APE++ + G
Sbjct: 133 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEIV-NYEPLG 189
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+ D+WS GV L+ G +PF G+ +Q
Sbjct: 190 LEADMWSIGVITYILLSGASPFLGETKQ 217
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIK--------CPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R+K G A K S+ + E+ +L N
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN- 69
Query: 259 IIKYEGCFKCGDSDCFVLEHVK-HDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
II F+ +LE V + + L ++ L++ + + + + LH + I
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRI 129
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + K V + LIDF +A
Sbjct: 130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 203 FIVEEEEGSGGYGTVYRARRKN-----DGTVVAIKC---PHANASKHYVSNELRMLERFG 254
+++ E G G +G V+ A N D +VA+K P A K + E +L
Sbjct: 17 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDF-QREAELLTNLQ 75
Query: 255 GKNFIIKYEGCFKCGDSD--CFVLEHVKHD-------------------RPEVLKKEIDL 293
++ I+K+ G CGD D V E++KH +P K E+ L
Sbjct: 76 HEH-IVKFYGV--CGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 294 SQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQA 353
SQ+ + + L Q VHRD+ N L + + DF ++ + + +
Sbjct: 133 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVK-IGDFGMSRDVYSTDYYRV 191
Query: 354 ---TLPGTKYVPP 363
T+ +++PP
Sbjct: 192 GGHTMLPIRWMPP 204
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 56/148 (37%), Gaps = 35/148 (23%)
Query: 202 SFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFI-- 259
+F+V + G G +G V + C H + K+Y +R ++++ I
Sbjct: 36 AFLVIRKMGDGTFGRV-------------LLCQHIDNKKYYAVKVVRNIKKYTRSAKIEA 82
Query: 260 ----------------IKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE----IDLSQLQWY 299
+KY G F D C + E + E++ + + ++ Y
Sbjct: 83 DILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLY 142
Query: 300 GYCLFRALASLHKQGIVHRDVKPGNFLF 327
+ +AL L K + H D+KP N L
Sbjct: 143 CIEILKALNYLRKMSLTHTDLKPENILL 170
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 27/160 (16%)
Query: 544 KQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDI 603
K G T+ +RAPEV+ D+WS G L L G F ++++ +
Sbjct: 212 KSDYHGSIINTRQYRAPEVILNLGWDVSS-DMWSFGCVLAELYTGSLLF--RTHEHMEHL 268
Query: 604 AKLRG------SEDLWEVAKLHNRES--------SFPEDLYAAKSLPPINLPEWCKLITK 649
A + L+E K + + ++PE+ A S+ I K + K
Sbjct: 269 AMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPEN---ASSINSI------KHVKK 319
Query: 650 RPDFLEVIPSSLF-DLVDKCLTVNPRLRISAEDALKHEFF 688
++I LF D + L ++P LR S + LKH+F
Sbjct: 320 CLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 16/146 (10%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKH--------YVSNELRMLERFGGKNFIIK 261
G G + TV AR AIK +H YV+ E ++ R F +K
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSRLD-HPFFVK 96
Query: 262 YEGCFKCGDSDCFVLEHVKHD-RPEVLKK--EIDLSQLQWYGYCLFRALASLHKQGIVHR 318
F+ + F L + K+ + ++K D + ++Y + AL LH +GI+HR
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAMV 344
D+KP N L + + + + DF A V
Sbjct: 157 DLKPENILLN-EDMHIQITDFGTAKV 181
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 552 AGTKGFRAPEVLFRSQ----HQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + +PE+L + GP+ D WS GV + ++ G TPF+ +
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 35/185 (18%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF------- 253
E F + + G G +G V + KN V A+K + N+ ML+R
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMK----------ILNKWEMLKRAETACFRE 123
Query: 254 -------GGKNFIIKYEGCFKCGDSDCFVLEH-VKHDRPEVLKKEIDL---SQLQWYGYC 302
G +I F+ ++ V+++ V D +L K D ++Y
Sbjct: 124 ERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAE 183
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKGY--LIDFNLAM-VGFDGSFNQATLPGT- 358
+ A+ S+H+ VHRD+KP N L + G+ L DF + + DG+ + GT
Sbjct: 184 MVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIRLADFGSCLKLMEDGTVQSSVAVGTP 240
Query: 359 KYVPP 363
Y+ P
Sbjct: 241 DYISP 245
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL K P P + + + + G + K+ GT F APE++ + G
Sbjct: 140 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEIV-NYEPLG 196
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+ D+WS GV L+ G +PF G+ +Q
Sbjct: 197 LEADMWSIGVITYILLSGASPFLGETKQ 224
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIK--------CPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R+K G A K S+ + E+ +L N
Sbjct: 18 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN- 76
Query: 259 IIKYEGCFKCGDSDCFVLEHVK-HDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
II F+ +LE V + + L ++ L++ + + + + LH + I
Sbjct: 77 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRI 136
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + K V + LIDF +A
Sbjct: 137 AHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 515 DLSDLQILLLTKLHPVPVLIIFYLLLGN----GKQKKDGPCAGTKGFRAPEVLFRSQHQG 570
DL I+LL K P P + + + + G + K+ GT F APE++ + G
Sbjct: 154 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEIV-NYEPLG 210
Query: 571 PKLDIWSAGVTLLYLMIGRTPFFGDPEQ 598
+ D+WS GV L+ G +PF G+ +Q
Sbjct: 211 LEADMWSIGVITYILLSGASPFLGETKQ 238
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIK--------CPHANASKHYVSNELRMLERFGGKNF 258
EE GSG + V + R+K G A K S+ + E+ +L N
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPN- 90
Query: 259 IIKYEGCFKCGDSDCFVLEHVK-HDRPEVLKKEIDLSQLQWYGYC--LFRALASLHKQGI 315
II F+ +LE V + + L ++ L++ + + + + LH + I
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRI 150
Query: 316 VHRDVKPGNFLFSCKAV---KGYLIDFNLA 342
H D+KP N + K V + LIDF +A
Sbjct: 151 AHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 550 PCA----GTKGFRAPEVLFRS-QHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKD 602
PC GT + APE++ + + G DIWS G T++ + G+ PF+ G+P+ +
Sbjct: 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK 237
Query: 603 IAKLR 607
+ +
Sbjct: 238 VGMFK 242
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--VSNELRMLERFGGKNFIIKYEGCFK 267
G G YG VY R ++ +AIK S++ + E+ + + KN I++Y G F
Sbjct: 31 GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN-IVQYLGSFS 89
Query: 268 CGDSDCFVLEHVKHDRPEVLKK------EIDLSQLQWYGYCLFRALASLHKQGIVHRDVK 321
+E V L + + + + +Y + L LH IVHRD+K
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 149
Query: 322 PGNFLFS 328
N L +
Sbjct: 150 GDNVLIN 156
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 552 AGTKGFRAPEVLFRSQHQ--GPKLDIWSAGVTLLYLMI-GRTPFFGDPEQNIKDIAKLRG 608
+GT G+RAPE+L S + +DI+S G Y++ G+ P FGD +I +RG
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP-FGDKYSRESNI--IRG 267
Query: 609 SEDLWEVAKLHNR 621
L E+ LH+R
Sbjct: 268 IFSLDEMKCLHDR 280
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 547 KDGPC----AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKD 602
KDG GT + APEVL G +D W GV + +M GR PF+ + + +
Sbjct: 161 KDGATMKXFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 219
Query: 603 I 603
+
Sbjct: 220 L 220
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 552 AGTKGFRAPEVLFRSQHQ--GPKLDIWSAGVTLLYLMI-GRTPFFGDPEQNIKDIAKLRG 608
+GT G+RAPE+L S + +DI+S G Y++ G+ P FGD +I +RG
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP-FGDKYSRESNI--IRG 267
Query: 609 SEDLWEVAKLHNR 621
L E+ LH+R
Sbjct: 268 IFSLDEMKCLHDR 280
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 547 KDGPC----AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKD 602
KDG GT + APEVL G +D W GV + +M GR PF+ + + +
Sbjct: 162 KDGATMKXFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 220
Query: 603 I 603
+
Sbjct: 221 L 221
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 547 KDGPC----AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKD 602
KDG GT + APEVL G +D W GV + +M GR PF+ + + +
Sbjct: 163 KDGATMKXFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 221
Query: 603 I 603
+
Sbjct: 222 L 222
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 30/171 (17%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N I+
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN-IL 67
Query: 261 KYEGCFK----------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASL 310
+ G C S + H+ + E++K ID+++ G + L
Sbjct: 68 LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQG------MDYL 120
Query: 311 HKQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLAMVG--FDGSFNQATLPGT 358
H + I+HRD+K N FL VK + DF LA V + GS L G+
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVK--IGDFGLATVKSRWSGSHQFEQLSGS 169
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 547 KDGPC----AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKD 602
KDG GT + APEVL G +D W GV + +M GR PF+ + + +
Sbjct: 304 KDGATMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 362
Query: 603 I 603
+
Sbjct: 363 L 363
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 547 KDGPC----AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKD 602
KDG GT + APEVL G +D W GV + +M GR PF+ + + +
Sbjct: 301 KDGATMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 359
Query: 603 I 603
+
Sbjct: 360 L 360
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 550 PCA----GTKGFRAPEVLFRS-QHQGPKLDIWSAGVTLLYLMIGRTPFF--GDPEQNIKD 602
PC GT + APE++ + + G DIWS G T++ + G+ PF+ G+P+ +
Sbjct: 164 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK 223
Query: 603 IAKLR 607
+ +
Sbjct: 224 VGMFK 228
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHY--VSNELRMLERFGGKNFIIKYEGCFK 267
G G YG VY R ++ +AIK S++ + E+ + + KN I++Y G F
Sbjct: 17 GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN-IVQYLGSFS 75
Query: 268 CGDSDCFVLEHVKHDRPEVLKK------EIDLSQLQWYGYCLFRALASLHKQGIVHRDVK 321
+E V L + + + + +Y + L LH IVHRD+K
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 135
Query: 322 PGNFLFS 328
N L +
Sbjct: 136 GDNVLIN 142
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 552 AGTKGFRAPEVLFRSQ----HQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + +PE+L + GP+ D WS GV + ++ G TPF+ +
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 284
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 306 ALASLHKQGIVHRDVKPGNFLFSCKAVKGY--LIDFNLAM-VGFDGSFNQATLPGT-KYV 361
A+ S+H+ VHRD+KP N L V G+ L DF + + DG+ + GT Y+
Sbjct: 187 AIDSIHQLHYVHRDIKPDNVLLD---VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 243
Query: 362 PP 363
P
Sbjct: 244 SP 245
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 552 AGTKGFRAPEVLFRSQ----HQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + +PE+L + GP+ D WS GV + ++ G TPF+ +
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 300
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 306 ALASLHKQGIVHRDVKPGNFLFSCKAVKGY--LIDFNLAM-VGFDGSFNQATLPGT-KYV 361
A+ S+H+ VHRD+KP N L V G+ L DF + + DG+ + GT Y+
Sbjct: 203 AIDSIHQLHYVHRDIKPDNVLLD---VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 259
Query: 362 PP 363
P
Sbjct: 260 SP 261
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASK-HYVSNELRMLERFGGKNFIIKYEGCFK- 267
GSG +GTVY+ + D V +K + NE+ +L + N I+ + G
Sbjct: 45 GSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVN-ILLFMGYMTK 103
Query: 268 ---------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHR 318
C S + HV+ + ++ + ID+++ G + LH + I+HR
Sbjct: 104 DNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTAQG------MDYLHAKNIIHR 156
Query: 319 DVKPGN-FLFSCKAVKGYLIDFNLAMV 344
D+K N FL VK + DF LA V
Sbjct: 157 DMKSNNIFLHEGLTVK--IGDFGLATV 181
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 51/137 (37%), Gaps = 32/137 (23%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT + APEV+ + + K DIWS G+T + L G P+ P + +
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT------- 234
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
L N S + + + L+ S ++ CL
Sbjct: 235 ------LQNDPPSLETGV-------------------QDKEMLKKYGKSFRKMISLCLQK 269
Query: 672 NPRLRISAEDALKHEFF 688
+P R +A + L+H+FF
Sbjct: 270 DPEKRPTAAELLRHKFF 286
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 57/143 (39%), Gaps = 15/143 (10%)
Query: 199 NFESFIVEEEEGSGGYGTV---YRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGG 255
N + + ++E GSG V Y A +K + I S + E++ + +
Sbjct: 8 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH 67
Query: 256 KNFIIKYEGCFKCGD---------SDCFVLEHVKH--DRPEVLKKEIDLSQLQWYGYCLF 304
N I+ Y F D S VL+ +KH + E +D S + +
Sbjct: 68 PN-IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 305 RALASLHKQGIVHRDVKPGNFLF 327
L LHK G +HRDVK GN L
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILL 149
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 69/172 (40%), Gaps = 19/172 (11%)
Query: 557 FRAPEVLFRS-QHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEV 615
+ +PEVL ++ Q K DI+S G+T L G PF P + + KL G+ V
Sbjct: 185 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEKLNGT-----V 238
Query: 616 AKLHNRESSFPEDLYAAKSLPPIN--LPEWCKLITKRPD--------FLEVIPSSLFDLV 665
L + + E+L + S N L + T RP + V
Sbjct: 239 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFV 298
Query: 666 DKCLTVNPRLRISAEDALKHEFFAPCHEMLRKQ--KLLRQGSSIDNTTGNPS 715
++CL NP R SA L H FF + +LLR + I N G+ S
Sbjct: 299 EQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQS 350
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 51/137 (37%), Gaps = 32/137 (23%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSED 611
GT + APEV+ + + K DIWS G+T + L G P+ P + +
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT------- 239
Query: 612 LWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV 671
L N S + + + L+ S ++ CL
Sbjct: 240 ------LQNDPPSLETGV-------------------QDKEMLKKYGKSFRKMISLCLQK 274
Query: 672 NPRLRISAEDALKHEFF 688
+P R +A + L+H+FF
Sbjct: 275 DPEKRPTAAELLRHKFF 291
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 57/143 (39%), Gaps = 15/143 (10%)
Query: 199 NFESFIVEEEEGSGGYGTV---YRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGG 255
N + + ++E GSG V Y A +K + I S + E++ + +
Sbjct: 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH 72
Query: 256 KNFIIKYEGCFKCGD---------SDCFVLEHVKH--DRPEVLKKEIDLSQLQWYGYCLF 304
N I+ Y F D S VL+ +KH + E +D S + +
Sbjct: 73 PN-IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 305 RALASLHKQGIVHRDVKPGNFLF 327
L LHK G +HRDVK GN L
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILL 154
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 69/172 (40%), Gaps = 19/172 (11%)
Query: 557 FRAPEVLFRS-QHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEV 615
+ +PEVL ++ Q K DI+S G+T L G PF P + + KL G+ V
Sbjct: 201 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEKLNGT-----V 254
Query: 616 AKLHNRESSFPEDLYAAKSLPPIN--LPEWCKLITKRPD--------FLEVIPSSLFDLV 665
L + + E+L + S N L + T RP + V
Sbjct: 255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFV 314
Query: 666 DKCLTVNPRLRISAEDALKHEFFAPCHEMLRKQ--KLLRQGSSIDNTTGNPS 715
++CL NP R SA L H FF + +LLR + I N G+ S
Sbjct: 315 EQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQS 366
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF-FGDPEQNIKDIAKLRGSE 610
T+ +R PEV+ P D+WS G L G T F + +++ + K+ G
Sbjct: 232 VATRHYRPPEVILELGWAQP-CDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 290
Query: 611 DLWEVAKLHNRESSFPEDL-YAAKSLPPINLPEWCKLITKR--PDFLEVIPSSLFDLVDK 667
+ + ++ + L + S + E CK + D LE + LFDL+ +
Sbjct: 291 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV--QLFDLMRR 348
Query: 668 CLTVNPRLRISAEDALKHEFFA 689
L +P RI+ +AL H FFA
Sbjct: 349 MLEFDPAQRITLAEALLHPFFA 370
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 24/113 (21%)
Query: 273 CFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLF- 327
C E + + E LK+ L ++ Y L AL LH+ + H D+KP N LF
Sbjct: 130 CIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFV 189
Query: 328 ------------SC--KAVKGYLI---DFNLAMVGFDGSFNQATLPGTKYVPP 363
SC K+VK I DF A FD + + Y PP
Sbjct: 190 NSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT--FDHEHHTTIVATRHYRPP 240
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF--------------GG 255
G G + V + K G V A+K + N+ ML+R G
Sbjct: 70 GRGAFSEVAVVKMKQTGQVYAMK----------IMNKWDMLKRGEVSCFREERDVLVNGD 119
Query: 256 KNFIIKYEGCFKCGDSDCFVLEH-VKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLH 311
+ +I + F+ + V+E+ V D +L K I ++Y + A+ S+H
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 312 KQGIVHRDVKPGNFLFS-CKAVKGYLIDFNLAM-VGFDGSFNQATLPGT-KYVPP 363
+ G VHRD+KP N L C ++ L DF + + DG+ GT Y+ P
Sbjct: 180 RLGYVHRDIKPDNILLDRCGHIR--LADFGSCLKLRADGTVRSLVAVGTPDYLSP 232
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 552 AGTKGFRAPEVL------FRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + +PE+L + GP+ D W+ GV + G+TPF+ D
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 26/152 (17%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N ++
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 261 KYEGCFK---------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLH 311
K C S + H+ + E++K ID+++ G + LH
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQG------MDYLH 149
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLA 342
+ I+HRD+K N FL VK + DF LA
Sbjct: 150 AKSIIHRDLKSNNIFLHEDLTVK--IGDFGLA 179
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 26/152 (17%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N ++
Sbjct: 32 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 88
Query: 261 KYEGCFK---------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLH 311
K C S + H+ + E++K ID+++ G + LH
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQG------MDYLH 141
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLA 342
+ I+HRD+K N FL VK + DF LA
Sbjct: 142 AKSIIHRDLKSNNIFLHEDLTVK--IGDFGLA 171
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF-FGDPEQNIKDIAKLRGSE 610
T+ +R PEV+ P D+WS G L G T F + +++ + K+ G
Sbjct: 209 VATRHYRPPEVILELGWAQP-CDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 267
Query: 611 DLWEVAKLHNRESSFPEDL-YAAKSLPPINLPEWCKLITKR--PDFLEVIPSSLFDLVDK 667
+ + ++ + L + S + E CK + D LE + LFDL+ +
Sbjct: 268 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV--QLFDLMRR 325
Query: 668 CLTVNPRLRISAEDALKHEFFA 689
L +P RI+ +AL H FFA
Sbjct: 326 MLEFDPAQRITLAEALLHPFFA 347
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 20/89 (22%)
Query: 293 LSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLF-------------SC--KAVKGYLI 337
L ++ Y L AL LH+ + H D+KP N LF SC K+VK I
Sbjct: 131 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSI 190
Query: 338 ---DFNLAMVGFDGSFNQATLPGTKYVPP 363
DF A FD + + Y PP
Sbjct: 191 RVADFGSAT--FDHEHHTTIVATRHYRPP 217
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNI 600
GT + APE++ Q G +D W+ GV L ++ G+ PF G+ E +
Sbjct: 503 CGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 550
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 16/178 (8%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF-----GGKNFIIKYEG 264
G G +G V + RK + A+K + E M+E+ G F+ +
Sbjct: 350 GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS 409
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQ-----WYGYCLFRALASLHKQGIVHRD 319
CF+ D FV+E+V + +++ + + + +Y + L L +GI++RD
Sbjct: 410 CFQTMDRLYFVMEYV--NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 467
Query: 320 VKPGNFLFSCKA-VKGYLIDFNLAMVG-FDGSFNQATLPGTKYVPPVNGRKVPSAKSL 375
+K N + + +K + DF + +DG + Y+ P P KS+
Sbjct: 468 LKLDNVMLDSEGHIK--IADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSV 523
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF-FGDPEQNIKDIAKLRGSE 610
T+ +R PEV+ P D+WS G L G T F + +++ + K+ G
Sbjct: 200 VATRHYRPPEVILELGWAQP-CDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 258
Query: 611 DLWEVAKLHNRESSFPEDL-YAAKSLPPINLPEWCKLITKR--PDFLEVIPSSLFDLVDK 667
+ + ++ + L + S + E CK + D LE + LFDL+ +
Sbjct: 259 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV--QLFDLMRR 316
Query: 668 CLTVNPRLRISAEDALKHEFFA 689
L +P RI+ +AL H FFA
Sbjct: 317 MLEFDPAQRITLAEALLHPFFA 338
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 20/89 (22%)
Query: 293 LSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLF-------------SC--KAVKGYLI 337
L ++ Y L AL LH+ + H D+KP N LF SC K+VK I
Sbjct: 122 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSI 181
Query: 338 ---DFNLAMVGFDGSFNQATLPGTKYVPP 363
DF A FD + + Y PP
Sbjct: 182 RVADFGSAT--FDHEHHTTIVATRHYRPP 208
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 22/149 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKC---PHANASKHYVSNELRMLERFGGKNFIIKYEGCF 266
G GG+G VY+ R DG +VA+K + E+ M+ +N +++ G
Sbjct: 39 GRGGFGKVYKGRLA-DGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN-LLRLRGFC 96
Query: 267 KCGDSDCFVLEHVKH--------DRPEVLKKEIDLSQLQWYGYCLFRALASLHKQ---GI 315
V ++ + +RPE + +D + Q R LA LH I
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRERPES-QPPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 316 VHRDVKPGNFLF--SCKAVKGYLIDFNLA 342
+HRDVK N L +AV G DF LA
Sbjct: 156 IHRDVKAANILLDEEFEAVVG---DFGLA 181
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 552 AGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNI 600
GT + APE++ Q G +D W+ GV L ++ G+ PF G+ E +
Sbjct: 182 CGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 229
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 12/132 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF-----GGKNFIIKYEG 264
G G +G V + RK + A+K + E M+E+ G F+ +
Sbjct: 29 GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS 88
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQ-----WYGYCLFRALASLHKQGIVHRD 319
CF+ D FV+E+V + +++ + + + +Y + L L +GI++RD
Sbjct: 89 CFQTMDRLYFVMEYV--NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 146
Query: 320 VKPGNFLFSCKA 331
+K N + +
Sbjct: 147 LKLDNVMLDSEG 158
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC---PHANASKHYVSNELRMLERFGGKN 257
E F E+ G G +G V++ VVAIK A + E+ +L +
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP- 80
Query: 258 FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE--IDLSQLQWYGYCLFRALASLHKQGI 315
++ KY G + ++E++ L + +D +Q+ + + L LH +
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 316 VHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
+HRD+K N L S VK L DF +A D + GT +
Sbjct: 141 IHRDIKAANVLLSEHGEVK--LADFGVAGQLTDTQIKRNXFVGTPF 184
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 55/144 (38%), Gaps = 42/144 (29%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIA 604
Q K GT + APEV+ +S + K DIWS G+T + L G P
Sbjct: 173 QIKRNXFVGTPFWMAPEVIKQSAYDS-KADIWSLGITAIELARGEPPH------------ 219
Query: 605 KLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDL 664
++LH + F L P N P + +P L +
Sbjct: 220 -----------SELHPMKVLF---------LIPKNNPPTLEGNYSKP---------LKEF 250
Query: 665 VDKCLTVNPRLRISAEDALKHEFF 688
V+ CL P R +A++ LKH+F
Sbjct: 251 VEACLNKEPSFRPTAKELLKHKFI 274
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 26/152 (17%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASK----HYVSNELRMLERFGGKNFII 260
V + GSG +GTVY+ + D VA+K + A NE+ +L + N ++
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 261 KYEGCFK---------CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLH 311
K C S + H+ + E++K ID+++ G + LH
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQG------MDYLH 121
Query: 312 KQGIVHRDVKPGN-FLFSCKAVKGYLIDFNLA 342
+ I+HRD+K N FL VK + DF LA
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVK--IGDFGLA 151
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDF 339
L R+LA+L KQG H DV+P N + + LIDF
Sbjct: 348 LLRSLAALEKQGFWHDDVRPWNVMVDARQ-HARLIDF 383
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDF 339
L R+LA+L KQG H DV+P N + + LIDF
Sbjct: 348 LLRSLAALEKQGFWHDDVRPWNVMVDARQ-HARLIDF 383
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 306 ALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVP 362
A+ LH I HRDVKP N L++ K L L GF Q L Y P
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVL---KLTDFGFAKETTQNALQTPCYTP 174
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLR 607
PC T + APEVL ++ D+WS GV + L+ G PF+ + Q I K R
Sbjct: 170 PCY-TPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCK--AVKGYLIDFNLA 342
L A++ +H G+VHRD+KP N LF+ + ++ +IDF A
Sbjct: 115 LVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFA 156
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
PC T + APE+L ++ + D+WS GV L ++ G+ PF
Sbjct: 169 PCF-TLHYAAPELLNQNGYD-ESCDLWSLGVILYTMLSGQVPF 209
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 306 ALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVP 362
A+ LH I HRDVKP N L++ K L L GF Q L Y P
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVL---KLTDFGFAKETTQNALQTPCYTP 193
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIAKLR 607
PC T + APEVL ++ D+WS GV + L+ G PF+ + Q I K R
Sbjct: 189 PCY-TPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR 244
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC---PHANASKHYVSNELRMLERFGGKN 257
E F E+ G G +G V++ VVAIK A + E+ +L +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP- 65
Query: 258 FIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKE--IDLSQLQWYGYCLFRALASLHKQGI 315
++ KY G + ++E++ L + +D +Q+ + + L LH +
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 316 VHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
+HRD+K N L S VK L DF +A D + GT +
Sbjct: 126 IHRDIKAANVLLSEHGEVK--LADFGVAGQLTDTQIKRNXFVGTPF 169
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 55/144 (38%), Gaps = 42/144 (29%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIA 604
Q K GT + APEV+ +S + K DIWS G+T + L G P
Sbjct: 158 QIKRNXFVGTPFWMAPEVIKQSAYDS-KADIWSLGITAIELARGEPPH------------ 204
Query: 605 KLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDL 664
++LH + F L P N P + +P L +
Sbjct: 205 -----------SELHPMKVLF---------LIPKNNPPTLEGNYSKP---------LKEF 235
Query: 665 VDKCLTVNPRLRISAEDALKHEFF 688
V+ CL P R +A++ LKH+F
Sbjct: 236 VEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 540 LGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
L G+ K G AGT GF APE+L ++ +D ++ GVTL ++ R PF
Sbjct: 339 LKAGQTKTKG-YAGTPGFMAPELLLGEEYDF-SVDYFALGVTLYEMIAARGPF 389
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 87/222 (39%), Gaps = 26/222 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF----GGKNFIIKYEGC 265
G GG+G V+ + K G + A K + K + M+E+ FI+
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253
Query: 266 FKCGDSDCFVLEHVKHD--RPEVLKKEIDLSQLQ-----WYGYCLFRALASLHKQGIVHR 318
F+ C V+ + R + + D Q +Y + L LH++ I++R
Sbjct: 254 FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYR 313
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAM------------VGFDGSFNQATLPGTKYVPPVNG 366
D+KP N L + D LA+ G G L G +Y V+
Sbjct: 314 DLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 367 RKVP-SAKSLVAVKQDTR-KGSNLEPKDLKRKVVRQTNVHND 406
+ + ++A + R +G +E K+LK++V+ Q + D
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 540 LGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
L G+ K G AGT GF APE+L ++ +D ++ GVTL ++ R PF
Sbjct: 339 LKAGQTKTKG-YAGTPGFMAPELLLGEEYDF-SVDYFALGVTLYEMIAARGPF 389
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 87/222 (39%), Gaps = 26/222 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF----GGKNFIIKYEGC 265
G GG+G V+ + K G + A K + K + M+E+ FI+
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253
Query: 266 FKCGDSDCFVLEHVKHD--RPEVLKKEIDLSQLQ-----WYGYCLFRALASLHKQGIVHR 318
F+ C V+ + R + + D Q +Y + L LH++ I++R
Sbjct: 254 FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYR 313
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAM------------VGFDGSFNQATLPGTKYVPPVNG 366
D+KP N L + D LA+ G G L G +Y V+
Sbjct: 314 DLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 367 RKVP-SAKSLVAVKQDTR-KGSNLEPKDLKRKVVRQTNVHND 406
+ + ++A + R +G +E K+LK++V+ Q + D
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 21/172 (12%)
Query: 196 VLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK--CPHANASKHYVSNELRMLERF 253
V+ + + ++ ++ G GG+ V +DG A+K H + E M F
Sbjct: 24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF 83
Query: 254 GGKNFIIKYEGCFK---CGDSDCFVLEHVKH----DRPEVLKKEIDL---SQLQWYGYCL 303
N + C + +L K + E LK + + Q+ W +
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI 143
Query: 304 FRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATL 355
R L ++H +G HRD+KP N L + + L+D GS NQA +
Sbjct: 144 CRGLEAIHAKGYAHRDLKPTNILLGDEG-QPVLMDL--------GSMNQACI 186
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 10/152 (6%)
Query: 198 PNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKN 257
PNF V ++ G G +G + + VAIK + + E R ++
Sbjct: 4 PNFR---VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATE 60
Query: 258 FIIKYEGCFKCGDSDCFVLEHVK---HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQG 314
+ + G + VLE + D ++ + L + L + +H +
Sbjct: 61 GVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKS 120
Query: 315 IVHRDVKPGNFLFSCKAVKG----YLIDFNLA 342
+++RDVKP NFL K ++IDF LA
Sbjct: 121 LIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 540 LGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
L G+ K G AGT GF APE+L ++ +D ++ GVTL ++ R PF
Sbjct: 339 LKAGQTKTKG-YAGTPGFMAPELLLGEEYDF-SVDYFALGVTLYEMIAARGPF 389
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 87/222 (39%), Gaps = 26/222 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF----GGKNFIIKYEGC 265
G GG+G V+ + K G + A K + K + M+E+ FI+
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253
Query: 266 FKCGDSDCFVLEHVKHD--RPEVLKKEIDLSQLQ-----WYGYCLFRALASLHKQGIVHR 318
F+ C V+ + R + + D Q +Y + L LH++ I++R
Sbjct: 254 FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYR 313
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAM------------VGFDGSFNQATLPGTKYVPPVNG 366
D+KP N L + D LA+ G G L G +Y V+
Sbjct: 314 DLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 367 RKVP-SAKSLVAVKQDTR-KGSNLEPKDLKRKVVRQTNVHND 406
+ + ++A + R +G +E K+LK++V+ Q + D
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 540 LGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
L G+ K G AGT GF APE+L ++ +D ++ GVTL ++ R PF
Sbjct: 339 LKAGQTKTKG-YAGTPGFMAPELLLGEEYDF-SVDYFALGVTLYEMIAARGPF 389
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 87/222 (39%), Gaps = 26/222 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF----GGKNFIIKYEGC 265
G GG+G V+ + K G + A K + K + M+E+ FI+
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253
Query: 266 FKCGDSDCFVLEHVKHD--RPEVLKKEIDLSQLQ-----WYGYCLFRALASLHKQGIVHR 318
F+ C V+ + R + + D Q +Y + L LH++ I++R
Sbjct: 254 FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYR 313
Query: 319 DVKPGNFLFSCKAVKGYLIDFNLAM------------VGFDGSFNQATLPGTKYVPPVNG 366
D+KP N L + D LA+ G G L G +Y V+
Sbjct: 314 DLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 367 RKVP-SAKSLVAVKQDTR-KGSNLEPKDLKRKVVRQTNVHND 406
+ + ++A + R +G +E K+LK++V+ Q + D
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 54/143 (37%), Gaps = 42/143 (29%)
Query: 545 QKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDPEQNIKDIA 604
Q K GT + APEV+ +S + K DIWS G+T + L G P
Sbjct: 170 QIKRNXFVGTPFWMAPEVIKQSAYDF-KADIWSLGITAIELAKGEPP------------- 215
Query: 605 KLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDL 664
+ LH F L P N P + +P +
Sbjct: 216 ----------NSDLHPMRVLF---------LIPKNSPPTLEGQHSKP---------FKEF 247
Query: 665 VDKCLTVNPRLRISAEDALKHEF 687
V+ CL +PR R +A++ LKH+F
Sbjct: 248 VEACLNKDPRFRPTAKELLKHKF 270
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 17/170 (10%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKC---PHANASKHYVSNELRMLERFGGKN 257
E F + G G +G VY+ + VVAIK A + E+ +L +
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP- 77
Query: 258 FIIKYEGCFKCGDSDCFVLEHVKHD------RPEVLKKEIDLSQLQWYGYCLFRALASLH 311
+I +Y G + ++E++ +P L++ + L+ + + L LH
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR----EILKGLDYLH 133
Query: 312 KQGIVHRDVKPGNFLFSCKA-VKGYLIDFNLAMVGFDGSFNQATLPGTKY 360
+ +HRD+K N L S + VK L DF +A D + GT +
Sbjct: 134 SERKIHRDIKAANVLLSEQGDVK--LADFGVAGQLTDTQIKRNXFVGTPF 181
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 100 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVXECLDGGE-----LFS 148
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLID 338
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 149 RIQDRGDQAFTEREASEIX---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 205
Query: 339 FNLAMVGFDGSFNQATLPGTK--YVPP 363
+ S N T P YV P
Sbjct: 206 TDFGFAKETTSHNSLTTPCYTPYYVAP 232
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 15/177 (8%)
Query: 195 KVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS---KHYVSNELRMLE 251
K + N E ++ E+ G G +G V+ R + D T+VA+K K E R+L+
Sbjct: 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILK 167
Query: 252 RFGGKNFIIKYEGCFKCGDSDCFVLEHVKHD------RPEVLKKEIDLSQLQWYGYCLFR 305
++ N I++ G V+E V+ R E + + + LQ G
Sbjct: 168 QYSHPN-IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK-TLLQMVGDAA-A 224
Query: 306 ALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVP 362
+ L + +HRD+ N L + K V + DF ++ DG + A G + VP
Sbjct: 225 GMEYLESKCCIHRDLAARNCLVTEKNVLK-ISDFGMSREEADGVY--AASGGLRQVP 278
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
Query: 209 EGSGGYGTVYRARRKNDGT--VVAIKCPHANASKHYVSNELRMLE--RFGGKNFIIKYEG 264
EG G ++Y NDGT +VA+K S R +E R I+KY+G
Sbjct: 19 EGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKG 78
Query: 265 CFKCGD----SDCFVLEHVKHD--RPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHR 318
C C D S V+E+V R + + + L+QL + + +A LH Q +HR
Sbjct: 79 C--CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHR 136
Query: 319 DVKPGNFLF 327
+ N L
Sbjct: 137 ALAARNVLL 145
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 19/171 (11%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHAN-----ASKHYVSNELRMLERFGGKNFIIKYEG 264
G G +G VY AR K +VA+K + +H + E+ + N I++
Sbjct: 32 GKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN-ILRLYN 90
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIVHRD 319
F +LE+ R E+ K+ D + L AL H + ++HRD
Sbjct: 91 YFYDRRRIYLILEYAP--RGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRD 148
Query: 320 VKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPP--VNGR 367
+KP N L + + DF ++ S + T+ GT Y+PP + GR
Sbjct: 149 IKPEN-LLLGLKGELKIADFGWSVHA--PSLRRKTMCGTLDYLPPEMIEGR 196
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF 592
GT + PE++ H K+D+W GV L++G PF
Sbjct: 183 GTLDYLPPEMIEGRMH-NEKVDLWCIGVLCYELLVGNPPF 221
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
Query: 209 EGSGGYGTVYRARRKNDGT--VVAIKCPHANASKHYVSNELRMLE--RFGGKNFIIKYEG 264
EG G ++Y NDGT +VA+K S R +E R I+KY+G
Sbjct: 18 EGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKG 77
Query: 265 CFKCGD----SDCFVLEHVKHD--RPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHR 318
C C D S V+E+V R + + + L+QL + + +A LH Q +HR
Sbjct: 78 C--CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHR 135
Query: 319 DVKPGNFLF 327
+ N L
Sbjct: 136 ALAARNVLL 144
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 551 CAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
AGT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 198 LAGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G GG+G V + + G + A K + NE ++LE+ + F++
Sbjct: 193 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLAY 251
Query: 265 CFKCGDSDCFVLE---------HVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGI 315
++ D+ C VL H+ H + + ++ +Y + L LH++ I
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYH----MGQAGFPEARAVFYAAEICCGLEDLHRERI 307
Query: 316 VHRDVKPGNFLF 327
V+RD+KP N L
Sbjct: 308 VYRDLKPENILL 319
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 106 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVMECLDGGE-----LFS 154
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLID 338
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 155 RIQDRGDQAFTEREASEIM---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 211
Query: 339 FNLAMVGFDGSFNQATLPGTK--YVPP 363
+ S N T P YV P
Sbjct: 212 TDFGFAKETTSHNSLTTPCYTPYYVAP 238
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
PC T + APEVL ++ D+WS GV + L+ G PF+ +
Sbjct: 229 PCY-TPYYVAPEVLGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSN 272
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 100 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVMECLDGGE-----LFS 148
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLID 338
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 149 RIQDRGDQAFTEREASEIM---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 205
Query: 339 FNLAMVGFDGSFNQATLPGTK--YVPP 363
+ S N T P YV P
Sbjct: 206 TDFGFAKETTSHNSLTTPCYTPYYVAP 232
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
PC T + APEVL ++ D+WS GV + L+ G PF+ +
Sbjct: 223 PCY-TPYYVAPEVLGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSN 266
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 27/139 (19%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANA---SKHYVSNELRMLERFGGKNFIIKYEG 264
E G G YG+V + K G ++A+K + + + +L ++ R +I+++ G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 265 C-FKCGDS-DCFVLEHVKHDR-------------PEVLKKEIDLSQLQWYGYCLFRALAS 309
F+ GD C L D+ PE + +I L+ + +AL
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATV--------KALNH 140
Query: 310 LHKQ-GIVHRDVKPGNFLF 327
L + I+HRD+KP N L
Sbjct: 141 LKENLKIIHRDIKPSNILL 159
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 552 AGTKGFRAPEVLFRS---QHQGPKLDIWSAGVTLLYLMIGRTPF 592
AG + + APE + S Q + D+WS G+TL L GR P+
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFGGKNFI 259
++E+ G+G +GTV+RA G+ VA+K HA ++ E+ +++R N I
Sbjct: 41 IKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPN-I 96
Query: 260 IKYEGCFKCGDSDCFVLEHVKHDRPEVL------KKEIDLSQLQWYGYCLFRALASLHKQ 313
+ + G + V E++ L ++++D + Y + + + LH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 314 G--IVHRDVKPGNFLFSCK-AVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPPVNGRKV 369
IVHRD+K N L K VK + DF L+ + GT +++ P R
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVK--VCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 370 PS 371
PS
Sbjct: 215 PS 216
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 56 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVMECLDGGE-----LFS 104
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLID 338
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 105 RIQDRGDQAFTEREASEIM---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 161
Query: 339 FNLAMVGFDGSFNQATLPGTK--YVPP 363
+ S N T P YV P
Sbjct: 162 TDFGFAKETTSHNSLTTPCYTPYYVAP 188
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
PC T + APEVL ++ D+WS GV + L+ G PF+ +
Sbjct: 179 PCY-TPYYVAPEVLGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSN 222
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 28/181 (15%)
Query: 201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFII 260
E + + ++ G GG TVY A VAIK + L+ ER + +
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK--EETLKRFEREVHNSSQL 68
Query: 261 KYEGCFKCGD----SDCFVL-----------EHVKHDRPEVLKKEIDLSQLQWYGYCLFR 305
++ D DC+ L E+++ P + I+ + +
Sbjct: 69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTN------QILD 122
Query: 306 ALASLHKQGIVHRDVKPGNFLF-SCKAVKGYLIDFNLAMVGFDGSFNQA--TLPGTKYVP 362
+ H IVHRD+KP N L S K +K + DF +A + S Q L +Y
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDSNKTLK--IFDFGIAKALSETSLTQTNHVLGTVQYFS 180
Query: 363 P 363
P
Sbjct: 181 P 181
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 54 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVMECLDGGE-----LFS 102
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLID 338
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 103 RIQDRGDQAFTEREASEIM---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 159
Query: 339 FNLAMVGFDGSFNQATLPGTK--YVPP 363
+ S N T P YV P
Sbjct: 160 TDFGFAKETTSHNSLTTPCYTPYYVAP 186
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
PC T + APEVL ++ D+WS GV + L+ G PF+ +
Sbjct: 177 PCY-TPYYVAPEVLGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSN 220
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 67/189 (35%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK---CPHANASKHYVSNELRMLERFGGKNFIIKY---- 262
G GG+G V+ A+ K D AIK P+ ++ V E++ L + I++Y
Sbjct: 15 GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG-IVRYFNAW 73
Query: 263 -------------EGCFKCGDSDCFVLEHVKHDRPEVLKKEID-------LSQLQ----- 297
E K +D + D P V + +D + QLQ
Sbjct: 74 LETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPK 133
Query: 298 -----------------W-----------YGYCLF------RALASLHKQGIVHRDVKPG 323
W +G CL A+ LH +G++HRD+KP
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPS 193
Query: 324 NFLFSCKAV 332
N F+ V
Sbjct: 194 NIFFTMDDV 202
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 20/163 (12%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN-ASKHYVSNELRMLERFG------- 254
+I+ + G G + TV+ A+ + T VA+K + +E+++L+R
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 255 ---GKNFIIKYEGCFKC----GDSDCFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCL 303
G N I+K F G V E + + ++KK I L ++ L
Sbjct: 81 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 304 FRALASLHKQ-GIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVG 345
L +H++ GI+H D+KP N L LI +A +G
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG 183
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 13/146 (8%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFI--IKYEGCFK 267
G G +G ++ + VAIK + + +E R + G I + Y G +
Sbjct: 19 GEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFG--Q 76
Query: 268 CGDSDCFVLEHVK---HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGN 324
G + V++ + D ++ ++ + + + + S+H++ +V+RD+KP N
Sbjct: 77 EGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDN 136
Query: 325 FLF----SCKAVKGYLIDFNLAMVGF 346
FL S A Y++DF MV F
Sbjct: 137 FLIGRPNSKNANMIYVVDF--GMVKF 160
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 20/163 (12%)
Query: 203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN-ASKHYVSNELRMLERFG------- 254
+I+ + G G + TV+ A+ + T VA+K + +E+++L+R
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 255 ---GKNFIIKYEGCFKC----GDSDCFVLEHVKHDRPEVLKKE----IDLSQLQWYGYCL 303
G N I+K F G V E + + ++KK I L ++ L
Sbjct: 81 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 304 FRALASLHKQ-GIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVG 345
L +H++ GI+H D+KP N L LI +A +G
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG 183
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 13/146 (8%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFI--IKYEGCFK 267
G G +G ++ + VAIK + + +E R + G I + Y G +
Sbjct: 18 GEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFG--Q 75
Query: 268 CGDSDCFVLEHVK---HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGN 324
G + V++ + D ++ ++ + + + + S+H++ +V+RD+KP N
Sbjct: 76 EGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDN 135
Query: 325 FLF----SCKAVKGYLIDFNLAMVGF 346
FL S A Y++DF MV F
Sbjct: 136 FLIGRPNSKNANMIYVVDF--GMVKF 159
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 19/132 (14%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G GG+G V + + G + A K + NE ++LE+ + F++
Sbjct: 193 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLAY 251
Query: 265 CFKCGDSDCFVLE---------HVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGI 315
++ D+ C VL H+ H + + ++ +Y + L LH++ I
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYH----MGQAGFPEARAVFYAAEICCGLEDLHRERI 307
Query: 316 VHRDVKPGNFLF 327
V+RD+KP N L
Sbjct: 308 VYRDLKPENILL 319
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 55 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVMECLDGGE-----LFS 103
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLID 338
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 104 RIQDRGDQAFTEREASEIM---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 160
Query: 339 FNLAMVGFDGSFNQATLPGTK--YVPP 363
+ S N T P YV P
Sbjct: 161 TDFGFAKETTSHNSLTTPCYTPYYVAP 187
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
PC T + APEVL ++ D+WS GV + L+ G PF+ +
Sbjct: 178 PCY-TPYYVAPEVLGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSN 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 21/182 (11%)
Query: 205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCP-----HANASKHYVSNELRMLERFGGKNFI 259
++E+ G+G +GTV+RA G+ VA+K HA ++ E+ +++R N I
Sbjct: 41 IKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPN-I 96
Query: 260 IKYEGCFKCGDSDCFVLEHVKHDRPEVL------KKEIDLSQLQWYGYCLFRALASLHKQ 313
+ + G + V E++ L ++++D + Y + + + LH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 314 G--IVHRDVKPGNFLFSCK-AVKGYLIDFNLAMVGFDGSFNQATLPGT-KYVPPVNGRKV 369
IVHR++K N L K VK + DF L+ + + + GT +++ P R
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVK--VCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 370 PS 371
PS
Sbjct: 215 PS 216
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 56 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVMECLDGGE-----LFS 104
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLID 338
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 105 RIQDRGDQAFTEREASEIM---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 161
Query: 339 FNLAMVGFDGSFNQATLPGTK--YVPP 363
+ S N T P YV P
Sbjct: 162 TDFGFAKETTSHNSLTTPCYTPYYVAP 188
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
PC T + APEVL ++ D+WS GV + L+ G PF+ +
Sbjct: 179 PCY-TPYYVAPEVLGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSN 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 61 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVMECLDGGE-----LFS 109
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLID 338
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 110 RIQDRGDQAFTEREASEIM---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 166
Query: 339 FNLAMVGFDGSFNQATLPGTK--YVPP 363
+ S N T P YV P
Sbjct: 167 TDFGFAKETTSHNSLTTPCYTPYYVAP 193
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
PC T + APEVL ++ D+WS GV + L+ G PF+ +
Sbjct: 184 PCY-TPYYVAPEVLGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSN 227
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 60 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVMECLDGGE-----LFS 108
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLID 338
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 109 RIQDRGDQAFTEREASEIM---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 165
Query: 339 FNLAMVGFDGSFNQATLPGTK--YVPP 363
+ S N T P YV P
Sbjct: 166 TDFGFAKETTSHNSLTTPCYTPYYVAP 192
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
PC T + APEVL ++ D+WS GV + L+ G PF+ +
Sbjct: 183 PCY-TPYYVAPEVLGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSN 226
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 62 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVMECLDGGE-----LFS 110
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLID 338
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 111 RIQDRGDQAFTEREASEIM---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 167
Query: 339 FNLAMVGFDGSFNQATLPGTK--YVPP 363
+ S N T P YV P
Sbjct: 168 TDFGFAKETTSHNSLTTPCYTPYYVAP 194
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
PC T + APEVL ++ D+WS GV + L+ G PF+ +
Sbjct: 185 PCY-TPYYVAPEVLGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSN 228
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 51 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 109
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 170 PENLLIDQ---QGYIQVTDFGFA 189
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGP----KLDIWSAGVTLLYLMIGRTPFFG 594
PC G+ + APEV+ + + D+WS GV L L+ G PF G
Sbjct: 181 PC-GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 306 ALASLHKQGIVHRDVKPGNFL 326
AL LH +GI HRD+KP N L
Sbjct: 123 ALDFLHNKGIAHRDLKPENIL 143
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 71 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 129
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 190 PENLLIDQ---QGYIQVTDFGFA 209
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 221 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 195 KVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS---KHYVSNELRMLE 251
K + N E ++ E+ G G +G V+ R + D T+VA+K K E R+L+
Sbjct: 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILK 167
Query: 252 RFGGKNFI 259
++ N +
Sbjct: 168 QYSHPNIV 175
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 70 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVMECLDGGE-----LFS 118
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLID 338
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 119 RIQDRGDQAFTEREASEIM---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 175
Query: 339 FNLAMVGFDGSFNQATLPGTK--YVPP 363
+ S N T P YV P
Sbjct: 176 TDFGFAKETTSHNSLTTPCYTPYYVAP 202
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
PC T + APEVL ++ D+WS GV + L+ G PF+ +
Sbjct: 193 PCY-TPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSN 236
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 550 PCAGTKGFRAPEVL--FRSQ--HQGPKLDIWSAGVTLLYLMIGRTPFFG 594
PC G+ + APEV+ F Q + D+WS GV L ++ G PF G
Sbjct: 181 PC-GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 306 ALASLHKQGIVHRDVKPGNFL 326
AL LH +GI HRD+KP N L
Sbjct: 123 ALDFLHTKGIAHRDLKPENIL 143
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPFFAD 241
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGP----KLDIWSAGVTLLYLMIGRTPFFG 594
PC G+ + APEV+ + + D+WS GV L L+ G PF G
Sbjct: 181 PC-GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 306 ALASLHKQGIVHRDVKPGNFL 326
AL LH +GI HRD+KP N L
Sbjct: 123 ALDFLHNKGIAHRDLKPENIL 143
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 16/126 (12%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 56 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVMECLDGGE-----LFS 104
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGY--L 336
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 105 RIQDRGDQAFTEREASEIM---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 161
Query: 337 IDFNLA 342
DF A
Sbjct: 162 TDFGFA 167
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 16/126 (12%)
Query: 219 RARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH 278
+ARR+ + A +CPH N + G+ ++ C G+ L
Sbjct: 54 KARREVELHWRASQCPHIVRIVDVYEN------LYAGRKCLLIVMECLDGGE-----LFS 102
Query: 279 VKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGY--L 336
DR + E + S++ + A+ LH I HRDVKP N L++ K L
Sbjct: 103 RIQDRGDQAFTEREASEIM---KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 159
Query: 337 IDFNLA 342
DF A
Sbjct: 160 TDFGFA 165
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 550 PCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
PC T + APEVL ++ D+WS GV + L+ G PF+ +
Sbjct: 177 PCY-TPYYVAPEVLGPEKYDK-SCDMWSLGVIMYILLCGYPPFYSN 220
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 553 GTKGFRAPEV----LFRSQHQ---GPKLDIWSAGVTLLYLMIGRTPF--FGDPEQNIKDI 603
GT+ + P++ + R HQ G +D+WS GVT + G PF F P +N + +
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236
Query: 604 AKL 606
K+
Sbjct: 237 YKI 239
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDF 339
L R+LA+L K+G H DV+P N + + LIDF
Sbjct: 348 LLRSLAALEKKGFWHDDVRPWNVMVDARQ-HARLIDF 383
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 37 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 95
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 155
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 156 PENLLIDE---QGYIQVTDFGFA 175
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 187 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 228
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEY 108
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEY 108
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 553 GTKGFRAPEV----LFRSQHQ---GPKLDIWSAGVTLLYLMIGRTPF--FGDPEQNIKDI 603
GT+ + P++ + R HQ G +D+WS GVT + G PF F P +N + +
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236
Query: 604 AKL 606
K+
Sbjct: 237 YKI 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEY 108
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 43 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 101
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 161
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 162 PENLLIDQ---QGYIQVTDFGFA 181
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 193 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 234
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 304 FRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
L LH + I+H DVK N L S + L DF A+ ++ L G Y+P
Sbjct: 176 LEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG-DYIPG 234
Query: 364 VNGRKVP 370
P
Sbjct: 235 TETHMAP 241
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 304 FRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
L LH + I+H DVK N L S + L DF A+ ++ L G Y+P
Sbjct: 160 LEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG-DYIPG 218
Query: 364 VNGRKVP 370
P
Sbjct: 219 TETHMAP 225
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 109
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 170 PENLLIDQ---QGYIQVTDFGFA 189
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 109
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 170 PENLLIDQ---QGYIQVTDFGFA 189
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 109
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 170 PENLLIDQ---QGYIQVTDFGFA 189
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 71 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 129
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 190 PENLLIDQ---QGYIQVTDFGFA 209
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 221 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 210 GSGGYGTVYRARRK----NDGTVVAIK-CPHANASKHY-VSNELRMLERFGGKNFIIKYE 263
G G +G+V R N G +VA+K H+ + E+++L+ +FI+KY
Sbjct: 16 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH-SDFIVKYR 74
Query: 264 GC-FKCGDSDC-FVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
G + G + V+E++ D + + +D S+L Y + + + L + VH
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 134
Query: 318 RDVKPGNFLFSCKA-VKGYLIDFNLA 342
RD+ N L +A VK + DF LA
Sbjct: 135 RDLAARNILVESEAHVK--IADFGLA 158
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 304 FRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
L LH + I+H DVK N L S + L DF A+ ++ L G Y+P
Sbjct: 174 LEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG-DYIPG 232
Query: 364 VNGRKVP 370
P
Sbjct: 233 TETHMAP 239
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 71 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 129
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLS---QLQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + I ++Y + LH +++RD+K
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 190 PENLLIDQ---QGYIQVTDFGFA 209
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 221 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLS---QLQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + I ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 210 GSGGYGTVYRARRK----NDGTVVAIK-CPHANASKHY-VSNELRMLERFGGKNFIIKYE 263
G G +G+V R N G +VA+K H+ + E+++L+ +FI+KY
Sbjct: 19 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH-SDFIVKYR 77
Query: 264 GC-FKCGDSDC-FVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
G + G V+E++ D + + +D S+L Y + + + L + VH
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 137
Query: 318 RDVKPGNFLFSCKA-VKGYLIDFNLA-MVGFDGSFNQATLPG 357
RD+ N L +A VK + DF LA ++ D + PG
Sbjct: 138 RDLAARNILVESEAHVK--IADFGLAKLLPLDKDYYVVREPG 177
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 45 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 103
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLS---QLQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + I ++Y + LH +++RD+K
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 163
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 164 PENLLIDQ---QGYIQVTDFGFA 183
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 195 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 236
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLS---QLQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + I ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N + +GY+ DF A
Sbjct: 169 PENLIIDQ---QGYIQVTDFGFA 188
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLS---QLQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + I ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+ + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N + +GY+ DF LA
Sbjct: 169 PENLMIDQ---QGYIKVTDFGLA 188
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+ + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N + +GY+ DF LA
Sbjct: 169 PENLMIDQ---QGYIQVTDFGLA 188
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLS---QLQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + I ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E++ D L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIKVADFGFA 188
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIKVADFGFA 188
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E++ D L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIKVADFGFA 188
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 109
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 170 PENLLIDQ---QGYIQVTDFGFA 189
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLS---QLQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + I ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 193 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 234
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 43 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 101
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLS---QLQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + I ++Y + LH +++RD+K
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 161
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 162 PENLLIDQ---QGYIQVTDFGFA 181
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 109
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLS---QLQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + I ++Y + LH +++RD+K
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 170 PENLLIDQ---QGYIQVTDFGFA 189
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 109
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 170 PENLLIDQ---QGYIQVTDFGFA 189
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + K G A+K + NE R+L+ F++K E
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 109
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+ + L++ S+ ++Y + LH +++RD+K
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N + +GY+ DF A
Sbjct: 170 PENLMIDQ---QGYIKVTDFGFA 189
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 28/175 (16%)
Query: 303 LFRALASLHKQGIVHRDVKPGNFLFSCKAVKG----YLIDFNLAMVGFDGSFNQATLPGT 358
L + +H + +++RDVKP NFL + K ++IDF LA
Sbjct: 106 LLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA---------------K 150
Query: 359 KYVPPVNGRKVP--SAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQ 416
+Y+ P + +P KSL + ++L + +R + R + Q
Sbjct: 151 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 210
Query: 417 GADGSGITSAKEA---TSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASD 468
G + + T TP E L E P +E+ + L+ R +E D
Sbjct: 211 GLKADTLKERYQKIGDTKRNTPIEALCENFP----EEMATYLRYVRRLDFFEKPD 261
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKHDRPEVLKKEIDLS---QLQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + I ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 210 GSGGYGTVYRARRK----NDGTVVAIK-CPHANASKHY-VSNELRMLERFGGKNFIIKYE 263
G G +G+V R N G +VA+K H+ + E+++L+ +FI+KY
Sbjct: 20 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH-SDFIVKYR 78
Query: 264 GC-FKCGDSDC-FVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
G + G V+E++ D + + +D S+L Y + + + L + VH
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 138
Query: 318 RDVKPGNFLFSCKA-VKGYLIDFNLA-MVGFDGSFNQATLPG 357
RD+ N L +A VK + DF LA ++ D + PG
Sbjct: 139 RDLAARNILVESEAHVK--IADFGLAKLLPLDKDYYVVREPG 178
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 210 GSGGYGTVYRARRK----NDGTVVAIK-CPHANASKHY-VSNELRMLERFGGKNFIIKYE 263
G G +G+V R N G +VA+K H+ + E+++L+ +FI+KY
Sbjct: 32 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH-SDFIVKYR 90
Query: 264 GC-FKCGDSDC-FVLEHVK----HDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVH 317
G + G V+E++ D + + +D S+L Y + + + L + VH
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 150
Query: 318 RDVKPGNFLFSCKA-VKGYLIDFNLA-MVGFDGSFNQATLPG 357
RD+ N L +A VK + DF LA ++ D + PG
Sbjct: 151 RDLAARNILVESEAHVK--IADFGLAKLLPLDKDYYVVREPG 190
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 108
Query: 265 CFKCGDSDCFVLEHVKH-DRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 169 PENLLIDQ---QGYIQVTDFGFA 188
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 540 LGNGKQKKDGPCA---GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP 596
G+G KD GT+ + PE + ++ G +WS G+ L ++ G PF D
Sbjct: 202 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
Query: 597 E 597
E
Sbjct: 262 E 262
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
Query: 243 VSNELRMLERFG-GKNFIIKYEGCFKCGDSDCFVLEHVKHDRPEVLKKEIDL----SQLQ 297
V E+ +L++ G + +I+ F+ DS +LE RPE ++ D LQ
Sbjct: 101 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-----RPEPVQDLFDFITERGALQ 155
Query: 298 -----WYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQ 352
+ + + A+ H G++HRD+K N L + LIDF + D +
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 215
Query: 353 ATLPGTK-YVPP 363
GT+ Y PP
Sbjct: 216 --FDGTRVYSPP 225
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 553 GTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD 595
GT + APE++ S+ +D W+ GV + + G PFF D
Sbjct: 186 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 227
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIKCPHANA-----SKHYVSNELRMLERFGGKNFIIKYEG 264
G+G +G V + G A+K + NE R+L+ F++K E
Sbjct: 36 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP-FLVKLEF 94
Query: 265 CFKCGDSDCFVLEHV-KHDRPEVLKKEIDLSQ--LQWYGYCLFRALASLHKQGIVHRDVK 321
FK + V+E+V + L++ S+ ++Y + LH +++RD+K
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 154
Query: 322 PGNFLFSCKAVKGYL--IDFNLA 342
P N L +GY+ DF A
Sbjct: 155 PENLLIDQ---QGYIQVTDFGFA 174
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 206 EEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF 253
E++ G GG+G V++ R D +VVAIK S+ E M+E+F
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE----GETEMIEKF 67
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 206 EEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF 253
E++ G GG+G V++ R D +VVAIK S+ E M+E+F
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE----GETEMIEKF 67
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 206 EEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF 253
E++ G GG+G V++ R D +VVAIK S+ E M+E+F
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE----GETEMIEKF 67
>pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3ENH|B Chain B, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3EN9|A Chain A, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
pdb|3EN9|B Chain B, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
Length = 540
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 300 GYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
Y + + LHK ++H D+ NF+F Y+IDF L +
Sbjct: 437 AYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDL---YIIDFGLGKI 478
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 317 HRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQ 352
HRDVKP N L S YL+DF +A D Q
Sbjct: 157 HRDVKPENILVSADDF-AYLVDFGIASATTDEKLTQ 191
>pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis.
pdb|2VWB|B Chain B, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis
Length = 535
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 300 GYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
Y + + LHK ++H D+ NF+F Y+IDF L +
Sbjct: 432 AYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDL---YIIDFGLGKI 473
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 19/159 (11%)
Query: 199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIK----CPHANASKHYVSNELRMLERFG 254
+ E ++ ++ G G +G + DG IK ++ + E+ +L
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 255 GKNFIIKYEGCFKCGDSDCFVLEHVK--------HDRPEVLKKEIDLSQLQWY-GYCLFR 305
N I++Y F+ S V+++ + + + VL +E + L W+ CL
Sbjct: 82 HPN-IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI--LDWFVQICL-- 136
Query: 306 ALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV 344
AL +H + I+HRD+K N +F K L DF +A V
Sbjct: 137 ALKHVHDRKILHRDIKSQN-IFLTKDGTVQLGDFGIARV 174
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 21/136 (15%)
Query: 212 GGYGTVYRARRKNDGTVVAIKCPHANASK--HYVSNELRMLERFGGKNFIIKYEGCFKCG 269
GG+ VY A+ G A+K +N + + E+ +++ G I+++ G
Sbjct: 39 GGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIG 98
Query: 270 --DSDC----FVL--EHVKHDRPEVLKK-------EIDLSQLQWYGYCLFRALASLHKQG 314
+SD F+L E K E LKK D +Y C RA+ +H+Q
Sbjct: 99 KEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTC--RAVQHMHRQK 156
Query: 315 --IVHRDVKPGNFLFS 328
I+HRD+K N L S
Sbjct: 157 PPIIHRDLKVENLLLS 172
>pdb|4E77|A Chain A, 2.0a Crystal Structure Of A Glutamate-1-Semialdehyde
Aminotransferase From Yersinia Pestis Co92
Length = 429
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 237 NASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLE 277
N+ + +R+ + G++ IIK+EGC+ G +DC +++
Sbjct: 116 NSGTEATXSAIRLARGYTGRDKIIKFEGCYH-GHADCLLVK 155
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 304 FRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLPGTKYVPP 363
L LH + I+H DVK N L S L DF A+ ++ L G Y+P
Sbjct: 195 LEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTG-DYIPG 253
Query: 364 VNGRKVP 370
P
Sbjct: 254 TETHMAP 260
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 39/218 (17%)
Query: 182 KATGNHNDDQTNAKVLPNFESF---IVEEEE-----------GSGGYGTVYRARRKNDGT 227
KAT + ND +++ ++P FES+ +V+ EE G G +G VY+ + DG
Sbjct: 7 KATNSINDALSSSYLVP-FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGA 64
Query: 228 VVAIK--CPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPE 285
VA+K P ++ E+ L F ++ G C + + +L + K+
Sbjct: 65 KVALKRRTPESSQGIEEFETEIETLS-FCRHPHLVSLIGF--CDERNEMILIY-KYMENG 120
Query: 286 VLKKEI--------DLSQLQWYGYCL--FRALASLHKQGIVHRDVKPGNFLFSCKAVKGY 335
LK+ + +S Q C+ R L LH + I+HRDVK N L V
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPK- 179
Query: 336 LIDFNLAMVG--FDGSFNQATLPGT-KYVPP---VNGR 367
+ DF ++ G D + + GT Y+ P + GR
Sbjct: 180 ITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGR 217
>pdb|5XIN|A Chain A, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|5XIN|B Chain B, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|5XIN|C Chain C, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|5XIN|D Chain D, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
Length = 393
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 395 RKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATSTRTPAERLREPL 443
RKV+RQ ++ +LG++ ++ G +G+ SAK+ ++ +R RE L
Sbjct: 116 RKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAA---LDRYREAL 161
>pdb|8XIM|A Chain A, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|8XIM|B Chain B, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|8XIM|C Chain C, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|8XIM|D Chain D, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|9XIM|A Chain A, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|9XIM|B Chain B, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|9XIM|C Chain C, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|9XIM|D Chain D, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
Length = 393
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 395 RKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATSTRTPAERLREPL 443
RKV+RQ ++ +LG++ ++ G +G+ SAK+ ++ +R RE L
Sbjct: 116 RKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAA---LDRYREAL 161
>pdb|3XIN|A Chain A, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|3XIN|B Chain B, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|3XIN|C Chain C, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|3XIN|D Chain D, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
Length = 393
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 395 RKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATSTRTPAERLREPL 443
RKV+RQ ++ +LG++ ++ G +G+ SAK+ ++ +R RE L
Sbjct: 116 RKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAA---LDRYREAL 161
>pdb|1XIM|A Chain A, Arginine Residues As Stabilizing Elements In Proteins
pdb|1XIM|B Chain B, Arginine Residues As Stabilizing Elements In Proteins
pdb|1XIM|C Chain C, Arginine Residues As Stabilizing Elements In Proteins
pdb|1XIM|D Chain D, Arginine Residues As Stabilizing Elements In Proteins
pdb|4XIM|A Chain A, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|4XIM|B Chain B, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|4XIM|C Chain C, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|4XIM|D Chain D, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|5XIM|A Chain A, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|5XIM|B Chain B, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|5XIM|C Chain C, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|5XIM|D Chain D, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|6XIM|A Chain A, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|6XIM|B Chain B, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|6XIM|C Chain C, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|6XIM|D Chain D, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|7XIM|A Chain A, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|7XIM|B Chain B, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|7XIM|C Chain C, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|7XIM|D Chain D, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
Length = 393
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 395 RKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATSTRTPAERLREPL 443
RKV+RQ ++ +LG++ ++ G +G+ SAK+ ++ +R RE L
Sbjct: 116 RKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAA---LDRYREAL 161
>pdb|2XIN|A Chain A, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|2XIN|B Chain B, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|2XIN|C Chain C, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|2XIN|D Chain D, Protein Engineering Of Xylose (Glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
Length = 393
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 395 RKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATSTRTPAERLREPL 443
RKV+RQ ++ +LG++ ++ G +G+ SAK+ ++ +R RE L
Sbjct: 116 RKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAA---LDRYREAL 161
>pdb|2GSA|A Chain A, Crystal Structure Of Glutamate-1-Semialdehyde Aminomutase
(Aminotransferase, Wild-Type Form)
pdb|2GSA|B Chain B, Crystal Structure Of Glutamate-1-Semialdehyde Aminomutase
(Aminotransferase, Wild-Type Form)
pdb|4GSA|A Chain A, Crystal Structure Of Glutamate-1-semialdehyde Aminomutase
(aminotransferase) Reduced With Cyanoborohydrate
pdb|4GSA|B Chain B, Crystal Structure Of Glutamate-1-semialdehyde Aminomutase
(aminotransferase) Reduced With Cyanoborohydrate
pdb|3GSB|A Chain A, Crystal Structure Of Glutamate-1-Semialdehyde Aminomutase
In Complex With Gabaculine
pdb|3GSB|B Chain B, Crystal Structure Of Glutamate-1-Semialdehyde Aminomutase
In Complex With Gabaculine
Length = 432
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 247 LRMLERFGGKNFIIKYEGCFKCGDSDCFVLE 277
LR++ + G++ IIK+EGC+ G +D F+++
Sbjct: 130 LRLMRAYTGRDKIIKFEGCYH-GHADMFLVK 159
>pdb|1XIN|A Chain A, Protein Engineering Of Xylose (glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|1XIN|B Chain B, Protein Engineering Of Xylose (glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|1XIN|C Chain C, Protein Engineering Of Xylose (glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|1XIN|D Chain D, Protein Engineering Of Xylose (glucose) Isomerase From
Actinoplanes Missouriensis. 1. Crystallography And Site-
Directed Mutagenesis Of Metal Binding Sites
pdb|1BHW|A Chain A, Low Temperature Middle Resolution Structure Of Xylose
Isomerase From Masc Data
pdb|1BHW|B Chain B, Low Temperature Middle Resolution Structure Of Xylose
Isomerase From Masc Data
pdb|1BHW|C Chain C, Low Temperature Middle Resolution Structure Of Xylose
Isomerase From Masc Data
pdb|1BHW|D Chain D, Low Temperature Middle Resolution Structure Of Xylose
Isomerase From Masc Data
Length = 393
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 395 RKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATSTRTPAERLREPL 443
RKV+RQ ++ +LG++ ++ G +G+ SAK+ ++ +R RE L
Sbjct: 116 RKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAA---LDRYREAL 161
>pdb|2XIM|A Chain A, Arginine Residues As Stabilizing Elements In Proteins
pdb|2XIM|B Chain B, Arginine Residues As Stabilizing Elements In Proteins
pdb|2XIM|C Chain C, Arginine Residues As Stabilizing Elements In Proteins
pdb|2XIM|D Chain D, Arginine Residues As Stabilizing Elements In Proteins
Length = 393
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 395 RKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATSTRTPAERLREPL 443
RKV+RQ ++ +LG++ ++ G +G+ SAK+ ++ +R RE L
Sbjct: 116 RKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAA---LDRYREAL 161
>pdb|3FQA|A Chain A, Gabaculien Complex Of Gabaculine Resistant Gsam Version
pdb|3FQA|B Chain B, Gabaculien Complex Of Gabaculine Resistant Gsam Version
Length = 427
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 247 LRMLERFGGKNFIIKYEGCFKCGDSDCFVLE 277
LR++ + G++ IIK+EGC+ G +D F+++
Sbjct: 125 LRLMRAYTGRDKIIKFEGCYH-GHADMFLVK 154
>pdb|3XIM|A Chain A, Arginine Residues As Stabilizing Elements In Proteins
pdb|3XIM|B Chain B, Arginine Residues As Stabilizing Elements In Proteins
pdb|3XIM|C Chain C, Arginine Residues As Stabilizing Elements In Proteins
pdb|3XIM|D Chain D, Arginine Residues As Stabilizing Elements In Proteins
Length = 393
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 395 RKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATSTRTPAERLREPL 443
RKV+RQ ++ +LG++ ++ G +G+ SAK+ ++ +R RE L
Sbjct: 116 RKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAA---LDRYREAL 161
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 12/146 (8%)
Query: 210 GSGGYGTVYRARRKNDGTVVAIK--CPHANASKHYVSNELRMLERFGGKNFIIKYEGCFK 267
G G +G + + G V+ +K ++ E++++ N ++K+ G
Sbjct: 19 GKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPN-VLKFIGVLY 77
Query: 268 CGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLF-----RALASLHKQGIVHRDVKP 322
F+ E++K + K +D SQ W F +A LH I+HRD+
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNS 136
Query: 323 GNFLFSCKAVKGYLI-DFNLAMVGFD 347
N L + K ++ DF LA + D
Sbjct: 137 HNCL--VRENKNVVVADFGLARLMVD 160
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 565 RSQHQGPKLDIWSAGVTLLYLM-IGRTPFFGDPEQNIKDI 603
R HQ D+WS GVT+ LM G P+ G P + I D+
Sbjct: 197 RFTHQS---DVWSYGVTVWELMTFGAKPYDGIPAREIPDL 233
>pdb|2HOY|A Chain A, Inter-Subunit Signaling In Gsam
pdb|2HOY|B Chain B, Inter-Subunit Signaling In Gsam
pdb|2HOZ|A Chain A, Inter-Subunit Signaling In Gsam
pdb|2HOZ|B Chain B, Inter-Subunit Signaling In Gsam
pdb|2HP1|A Chain A, Inter-Subunit Signaling In Gsam
pdb|2HP1|B Chain B, Inter-Subunit Signaling In Gsam
pdb|2HP2|A Chain A, Inter-Subunit Signaling In Gsam
pdb|2HP2|B Chain B, Inter-Subunit Signaling In Gsam
Length = 432
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 247 LRMLERFGGKNFIIKYEGCFKCGDSDCFVLE 277
LR++ + G++ IIK+EGC+ G +D F+++
Sbjct: 130 LRIMRAYTGRDKIIKFEGCYH-GHADMFLVK 159
>pdb|3FQ7|A Chain A, Gabaculine Complex Of Gsam
pdb|3FQ7|B Chain B, Gabaculine Complex Of Gsam
pdb|3USF|A Chain A, Crystal Structure Of Dava-4
pdb|3USF|B Chain B, Crystal Structure Of Dava-4
Length = 427
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 247 LRMLERFGGKNFIIKYEGCFKCGDSDCFVLE 277
LR++ + G++ IIK+EGC+ G +D F+++
Sbjct: 125 LRIMRAYTGRDKIIKFEGCYH-GHADMFLVK 154
>pdb|3FQ8|A Chain A, M248i Mutant Of Gsam
pdb|3FQ8|B Chain B, M248i Mutant Of Gsam
Length = 427
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 247 LRMLERFGGKNFIIKYEGCFKCGDSDCFVLE 277
LR++ + G++ IIK+EGC+ G +D F+++
Sbjct: 125 LRIMRAYTGRDKIIKFEGCYH-GHADMFLVK 154
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 26/149 (17%)
Query: 202 SFIVEEEEGSGGYGTVYRARRKN-----DGTVVAIKC---PHANASKHYVSNELRMLERF 253
+ +++ E G G +G V+ A N D +VA+K NA K + E +L
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDF-HREAELLTNL 72
Query: 254 GGKNFIIKYEGCFKCGDSDCFVLEHVKH-DRPEVLK---------------KEIDLSQLQ 297
++ I+K+ G GD V E++KH D + L+ E+ SQ+
Sbjct: 73 QHEH-IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 298 WYGYCLFRALASLHKQGIVHRDVKPGNFL 326
+ + L Q VHRD+ N L
Sbjct: 132 HIAQQIAAGMVYLASQHFVHRDLATRNCL 160
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 32/172 (18%)
Query: 182 KATGNHNDDQTNAKVLPNFESF---IVEEEE-----------GSGGYGTVYRARRKNDGT 227
KAT + ND +++ ++P FES+ +V+ EE G G +G VY+ + DG
Sbjct: 7 KATNSINDALSSSYLVP-FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGA 64
Query: 228 VVAIK--CPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVKHDRPE 285
VA+K P ++ E+ L F ++ G C + + +L + K+
Sbjct: 65 KVALKRRTPESSQGIEEFETEIETLS-FCRHPHLVSLIGF--CDERNEMILIY-KYMENG 120
Query: 286 VLKKEI--------DLSQLQWYGYCL--FRALASLHKQGIVHRDVKPGNFLF 327
LK+ + +S Q C+ R L LH + I+HRDVK N L
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL 172
>pdb|3KI0|A Chain A, Catalytic Fragment Of Cholix Toxin From Vibrio Cholerae In
Complex With Inhibitor Gp-D
pdb|3KI1|A Chain A, Catalytic Fragment Of Cholix Toxin From Vibrio Cholerae In
Complex With Inhibitor Gp-F
pdb|3KI2|A Chain A, Catalytic Fragment Of Cholix Toxin From Vibrio Cholerae In
Complex With Inhibitor Gp-G
pdb|3KI3|A Chain A, Catalytic Fragment Of Cholix Toxin From Vibrio Cholerae In
Complex With Inhibitor Gp-H
pdb|3KI4|A Chain A, Catalytic Fragment Of Cholix Toxin From Vibrio Cholerae In
Complex With Inhibitor Gp-P
pdb|3KI5|A Chain A, Catalytic Fragment Of Cholix Toxin From Vibrio Cholerae In
Complex With Inhibitor Gp-M
pdb|3KI6|A Chain A, Catalytic Fragment Of Cholix Toxin From Vibrio Cholerae In
Complex With Inhibitor Gp-L
pdb|3KI7|A Chain A, Catalytic Fragment Of Cholix Toxin From Vibrio Cholerae In
Complex With Inhibitor Gp-I
pdb|3NY6|A Chain A, Catalytic Fragment Of Cholix Toxin From Vibrio Cholerae In
Complex With Inhibitor V30
Length = 211
Score = 30.0 bits (66), Expect = 5.3, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN 245
+EG+G YG RA R G ++ + P A+ + Y +N
Sbjct: 86 KEGTGEYGLPTRAERDARGVMLRVYIPRASLERFYRTN 123
>pdb|3ESS|A Chain A, Catalytic Fragment Of Cholix Toxin From Vibrio Cholerae In
Complex With The 1,8-Naphthalimide Inhibitor
Length = 230
Score = 30.0 bits (66), Expect = 5.3, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN 245
+EG+G YG RA R G ++ + P A+ + Y +N
Sbjct: 105 KEGTGEYGLPTRAERDARGVMLRVYIPRASLERFYRTN 142
>pdb|2Q6M|A Chain A, Catalytic Fragment Of Cholix Toxin From Vibrio Cholerae In
Complex With The Pj34 Inhibitor
Length = 212
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 208 EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSN 245
+EG+G YG RA R G ++ + P A+ + Y +N
Sbjct: 86 KEGTGEYGLPTRAERDARGVMLRVYIPRASLERFYRTN 123
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 29/158 (18%)
Query: 207 EEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKN-FIIKYEGC 265
E + G +G V++A+ N+ V I K NE + G K+ I+++ G
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKI---FPIQDKQSWQNEYEVYSLPGMKHENILQFIGA 86
Query: 266 FKCG---DSDCFVLE--HVKHDRPEVLKKEIDLSQLQWYGYC-----LFRALASLH---- 311
K G D D +++ H K + LK + + W C + R LA LH
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIP 142
Query: 312 ------KQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAM 343
K I HRD+K N L + + DF LA+
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLK-NNLTACIADFGLAL 179
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,814,720
Number of Sequences: 62578
Number of extensions: 932649
Number of successful extensions: 4483
Number of sequences better than 100.0: 796
Number of HSP's better than 100.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 2445
Number of HSP's gapped (non-prelim): 1703
length of query: 728
length of database: 14,973,337
effective HSP length: 106
effective length of query: 622
effective length of database: 8,340,069
effective search space: 5187522918
effective search space used: 5187522918
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)