Query         004835
Match_columns 728
No_of_seqs    537 out of 2887
Neff          6.6 
Searched_HMMs 13730
Date          Mon Mar 25 07:19:33 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004835.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/004835hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 2.9E-54 2.1E-58  451.7  23.2  145  198-344     2-152 (271)
  2 d2j4za1 d.144.1.7 (A:126-388)  100.0 4.2E-54   3E-58  448.5  22.4  248  200-690     5-260 (263)
  3 d1yhwa1 d.144.1.7 (A:249-541)  100.0 4.4E-53 3.2E-57  447.5  26.3  253  201-692    20-277 (293)
  4 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 1.1E-52 7.9E-57  452.9  27.3  264  199-703     3-279 (337)
  5 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 7.2E-54 5.2E-58  458.7  16.8  143  200-344     5-154 (322)
  6 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 3.5E-53 2.6E-57  447.2  21.6  256  201-695     8-277 (288)
  7 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 1.2E-52   9E-57  443.4  22.0  279  205-696     2-291 (299)
  8 d1fota_ d.144.1.7 (A:) cAMP-de 100.0 4.5E-52 3.3E-56  444.1  25.7  254  200-697     3-269 (316)
  9 d2jfla1 d.144.1.7 (A:21-308) S 100.0 2.6E-52 1.9E-56  440.4  22.8  142  201-344    12-159 (288)
 10 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 6.7E-52 4.9E-56  438.1  24.9  285  200-696     1-294 (298)
 11 d1omwa3 d.144.1.7 (A:186-549)  100.0 8.6E-52 6.2E-56  450.3  24.4  263  200-701     3-281 (364)
 12 d1koaa2 d.144.1.7 (A:5915-6264 100.0 9.4E-52 6.9E-56  447.7  24.1  257  200-693    25-288 (350)
 13 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 5.9E-52 4.3E-56  441.5  22.1  253  201-690     9-269 (307)
 14 d1jksa_ d.144.1.7 (A:) Death-a 100.0 1.8E-51 1.3E-55  434.0  25.4  256  201-693    10-279 (293)
 15 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 1.6E-51 1.2E-55  445.9  24.9  262  199-704    39-313 (350)
 16 d1t4ha_ d.144.1.7 (A:) Protein 100.0 1.3E-51 9.6E-56  431.1  23.5  141  203-344    11-164 (270)
 17 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 5.3E-51 3.9E-55  436.1  28.0  290  199-693    33-327 (328)
 18 d2java1 d.144.1.7 (A:3-271) Se 100.0 7.7E-52 5.6E-56  432.5  20.5  249  200-688     3-269 (269)
 19 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0 1.8E-51 1.3E-55  438.2  23.2  141  202-344    16-164 (309)
 20 d1koba_ d.144.1.7 (A:) Twitchi 100.0 3.1E-51 2.3E-55  444.0  23.1  257  200-693    28-291 (352)
 21 d1xjda_ d.144.1.7 (A:) Protein 100.0 4.6E-51 3.4E-55  437.0  23.3  255  200-695     1-265 (320)
 22 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 1.7E-50 1.2E-54  437.0  26.9  279  202-694    21-312 (350)
 23 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 1.7E-50 1.2E-54  427.3  24.4  276  201-692     7-300 (305)
 24 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 1.4E-50 1.1E-54  424.6  23.5  278  200-690     1-286 (286)
 25 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 9.6E-51   7E-55  424.4  20.1  245  201-692     4-262 (273)
 26 d1phka_ d.144.1.7 (A:) gamma-s 100.0 6.8E-50   5E-54  419.5  26.3  255  200-691     2-276 (277)
 27 d1tkia_ d.144.1.7 (A:) Titin,  100.0   4E-50 2.9E-54  429.8  20.8  254  200-691     4-264 (321)
 28 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 2.6E-49 1.9E-53  426.2  24.8  281  201-695    18-311 (346)
 29 d3blha1 d.144.1.7 (A:8-325) Ce 100.0   8E-49 5.8E-53  417.1  25.9  287  199-690     8-310 (318)
 30 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 7.9E-49 5.8E-53  410.7  25.0  282  200-693     1-291 (292)
 31 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 1.9E-49 1.4E-53  427.0  18.6  141  200-344    10-163 (335)
 32 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 8.7E-49 6.4E-53  424.2  18.1  291  200-693    16-319 (355)
 33 d1opja_ d.144.1.7 (A:) Abelson 100.0 4.4E-48 3.2E-52  407.5  22.4  148  195-344    11-164 (287)
 34 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0 4.2E-48 3.1E-52  404.3  22.0  146  195-344     7-158 (272)
 35 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 1.5E-47 1.1E-51  412.9  26.7  287  201-695     8-305 (345)
 36 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 1.6E-47 1.2E-51  397.7  23.1  142  200-344     4-150 (263)
 37 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0 1.5E-47 1.1E-51  405.6  22.3  144  199-344    24-177 (299)
 38 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0   1E-47 7.4E-52  411.2  20.1  269  199-702    22-309 (322)
 39 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 2.2E-47 1.6E-51  408.7  22.2  146  197-344    33-213 (325)
 40 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 2.6E-47 1.9E-51  410.0  22.3  280  201-693    18-309 (348)
 41 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0   1E-47 7.6E-52  402.5  18.1  143  196-344     3-153 (276)
 42 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 2.9E-47 2.1E-51  401.0  21.1  143  199-344     6-158 (285)
 43 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 2.2E-47 1.6E-51  400.1  19.0  135  207-344    13-156 (277)
 44 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 4.3E-47 3.1E-51  396.8  20.9  142  201-344     7-160 (277)
 45 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0   7E-47 5.1E-51  392.5  21.8  142  200-344     3-149 (258)
 46 d1fmka3 d.144.1.7 (A:249-533)  100.0 1.6E-46 1.1E-50  395.5  21.8  146  195-344    11-162 (285)
 47 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 1.5E-46 1.1E-50  392.0  19.0  143  199-344     5-157 (273)
 48 d1mqba_ d.144.1.7 (A:) epha2 r 100.0   1E-45 7.3E-50  388.2  24.4  143  200-344     6-159 (283)
 49 d1byga_ d.144.1.7 (A:) Carboxy 100.0 1.1E-45 7.9E-50  384.4  19.9  145  196-344     2-152 (262)
 50 d1ywna1 d.144.1.7 (A:818-1166) 100.0 1.4E-45   1E-49  389.1  21.0  146  198-344    10-183 (299)
 51 d1xkka_ d.144.1.7 (A:) EGF rec 100.0 2.2E-45 1.6E-49  391.6  22.3  141  201-344     9-160 (317)
 52 d1ckia_ d.144.1.7 (A:) Casein  100.0 3.7E-45 2.7E-49  385.6  21.2  145  201-345     7-156 (299)
 53 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 5.5E-45   4E-49  385.6  21.5  143  200-344    12-189 (301)
 54 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 5.7E-45 4.1E-49  387.1  19.4  145  198-344     7-176 (309)
 55 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 4.2E-44 3.1E-48  378.6  22.4  147  196-344     8-184 (299)
 56 d1u46a_ d.144.1.7 (A:) Activat 100.0 1.7E-44 1.2E-48  377.4  18.8  143  199-344     6-160 (273)
 57 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 2.7E-44   2E-48  381.8  20.7  149  194-344    13-182 (308)
 58 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0   7E-44 5.1E-48  384.2  22.4  293  201-694    13-337 (362)
 59 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0 2.8E-43   2E-47  374.4  23.8  148  195-344    17-194 (311)
 60 d1csna_ d.144.1.7 (A:) Casein  100.0 6.5E-43 4.7E-47  368.4  23.3  144  201-344     5-155 (293)
 61 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0   1E-42 7.5E-47  370.4  22.7  139  204-344    30-179 (311)
 62 d1vjya_ d.144.1.7 (A:) Type I  100.0 8.8E-43 6.4E-47  369.4  13.2  140  201-344     3-157 (303)
 63 d1zara2 d.144.1.9 (A:91-281) R  99.8 1.4E-21 9.8E-26  191.5  12.8  130  203-344     2-151 (191)
 64 d1j7la_ d.144.1.6 (A:) Type II  98.3 2.1E-06 1.5E-10   85.1  11.9  140  200-344    13-213 (263)
 65 d1nd4a_ d.144.1.6 (A:) Aminogl  97.8 2.3E-05 1.7E-09   77.0   9.8  142  199-344     9-205 (255)
 66 d2pula1 d.144.1.6 (A:5-396) Me  97.5 0.00014 9.9E-09   77.1  10.3   75  206-282    31-116 (392)
 67 d1nw1a_ d.144.1.8 (A:) Choline  96.7  0.0014   1E-07   68.8   8.9   73  206-282    47-126 (395)
 68 d2ppqa1 d.144.1.6 (A:5-320) Ho  96.7  0.0015 1.1E-07   65.9   8.5  142  200-344    17-213 (316)
 69 d1zyla1 d.144.1.6 (A:4-328) Rd  96.6  0.0012 8.5E-08   67.6   6.6   67  215-282    36-109 (325)
 70 d1lu0a_ g.3.2.1 (A:) Trypsin i  59.8     1.5 0.00011   27.5   1.1   15    2-16      2-16  (29)
 71 d1cjaa_ d.144.1.3 (A:) Actin-f  31.3      44  0.0032   32.7   7.2  138  198-342    66-235 (342)

No 1  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.9e-54  Score=451.66  Aligned_cols=145  Identities=25%  Similarity=0.334  Sum_probs=130.7

Q ss_pred             CCCCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC---chhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEE
Q 004835          198 PNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA---SKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCF  274 (728)
Q Consensus       198 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~---~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~L  274 (728)
                      |.+++|++++.||+|+||+||+|+++.+|+.||||++....   ..+.+.+|+.+|++++||| |+++++++.+++..|+
T Consensus         2 Pf~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~Hpn-Iv~~~~~~~~~~~~~i   80 (271)
T d1nvra_           2 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGHRREGNIQYL   80 (271)
T ss_dssp             TTTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTT-BCCEEEEEEETTEEEE
T ss_pred             CCCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCC-EeeEeeeeccCceeEE
Confidence            56789999999999999999999999999999999986542   2356889999999999999 9999999999999999


Q ss_pred             EEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          275 VLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       275 V~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      ||||+.+++|..+..   .+++..++.++.||+.||.|||++|||||||||+||||+ +++.+||+|||+|+.
T Consensus        81 vmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~-~~~~~KL~DFG~a~~  152 (271)
T d1nvra_          81 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATV  152 (271)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-TTCCEEECCCTTCEE
T ss_pred             EEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEEC-CCCCEEEccchhhee
Confidence            999999988766643   489999999999999999999999999999999999999 666899999999975


No 2  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-54  Score=448.47  Aligned_cols=248  Identities=24%  Similarity=0.379  Sum_probs=212.5

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccC-----cCchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEE
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHA-----NASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCF  274 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~-----~~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~L  274 (728)
                      +++|++++.||+|+||+||+|+++.+|+.||||++..     ......+.+|+.++++++||| |+++++++.+++..|+
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~~~~~~~~~~~~~i   83 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN-ILRLYGYFHDATRVYL   83 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTT-BCCEEEEEECSSEEEE
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCC-CCeEEEEEEECCEEEE
Confidence            5789999999999999999999999999999999863     234567889999999999999 9999999999999999


Q ss_pred             EEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCCc
Q 004835          275 VLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFN  351 (728)
Q Consensus       275 V~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~~  351 (728)
                      ||||++++++..+..   .+++..++.|+.||+.||+|||++|||||||||+||||+ .++.+||+|||+|+.....   
T Consensus        84 vmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~-~~~~~kl~DFG~a~~~~~~---  159 (263)
T d2j4za1          84 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWSVHAPSS---  159 (263)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTSCEEECCCCSCSCCCCC---
T ss_pred             EEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceec-CCCCEeecccceeeecCCC---
Confidence            999999998876653   489999999999999999999999999999999999999 6678999999999641100   


Q ss_pred             cccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCccccccccc
Q 004835          352 QATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATS  431 (728)
Q Consensus       352 ~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~  431 (728)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (263)
T d2j4za1         160 --------------------------------------------------------------------------------  159 (263)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCC
Q 004835          432 TRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNK  511 (728)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (728)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (263)
T d2j4za1         160 --------------------------------------------------------------------------------  159 (263)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCC
Q 004835          512 GPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTP  591 (728)
Q Consensus       512 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~P  591 (728)
                                                         .....+||+.|+|||++.+. .|+.++|||||||++|+|++|++|
T Consensus       160 -----------------------------------~~~~~~Gt~~Y~APE~~~~~-~~~~~~DiwSlGvilyell~G~~P  203 (263)
T d2j4za1         160 -----------------------------------RRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSLGVLCYEFLVGKPP  203 (263)
T ss_dssp             -----------------------------------CCEETTEEGGGCCHHHHTTC-CCCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             -----------------------------------cccccCCCCcccCHHHHcCC-CCCchhhhhhHhHHHHHHhcCCCC
Confidence                                               00123599999999999665 469999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhccc
Q 004835          592 FFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV  671 (728)
Q Consensus       592 F~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~~  671 (728)
                      |.+.+...+...+.                                          ...+.+++.+++++.+||.+||..
T Consensus       204 f~~~~~~~~~~~i~------------------------------------------~~~~~~p~~~s~~~~~li~~~L~~  241 (263)
T d2j4za1         204 FEANTYQETYKRIS------------------------------------------RVEFTFPDFVTEGARDLISRLLKH  241 (263)
T ss_dssp             TCCSSHHHHHHHHH------------------------------------------TTCCCCCTTSCHHHHHHHHHHTCS
T ss_pred             CCCCCHHHHHHHHH------------------------------------------cCCCCCCccCCHHHHHHHHHHccC
Confidence            99877655443221                                          112234456789999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCcc
Q 004835          672 NPRLRISAEDALKHEFFAP  690 (728)
Q Consensus       672 dP~~Rpta~e~L~Hp~f~~  690 (728)
                      ||++|||++|+|+||||+.
T Consensus       242 dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         242 NPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             SGGGSCCHHHHHTCHHHHH
T ss_pred             CHhHCcCHHHHHcCcCcCC
Confidence            9999999999999999974


No 3  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.4e-53  Score=447.52  Aligned_cols=253  Identities=27%  Similarity=0.404  Sum_probs=213.0

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc--CchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEec
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN--ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH  278 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~--~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E~  278 (728)
                      ++|++.+.||+|+||+||+|+++.+|+.||||++...  ...+.+.+|+.++++++||| |++++++|...+.+|+||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-IVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTT-BCCEEEEEEETTEEEEEEEC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCC-EeeEeEEEEECCEEEEEEEe
Confidence            4799999999999999999999999999999998643  34567899999999999999 99999999999999999999


Q ss_pred             cCCCChHHHhh--cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCCccccCC
Q 004835          279 VKHDRPEVLKK--EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATLP  356 (728)
Q Consensus       279 ~~~~~l~~l~~--~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~~~~~~~  356 (728)
                      +.++++..+..  .+++..++.|+.||+.||.|||++|||||||||+||||+ .++.+||+|||+|+......       
T Consensus        99 ~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~-~~~~vkl~DFG~a~~~~~~~-------  170 (293)
T d1yhwa1          99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQ-------  170 (293)
T ss_dssp             CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTCCEEECCCTTCEECCSTT-------
T ss_pred             cCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEEC-CCCcEeeccchhheeecccc-------
Confidence            99999887764  489999999999999999999999999999999999999 56789999999997521100       


Q ss_pred             CCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCccccccccccCCcc
Q 004835          357 GTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATSTRTPA  436 (728)
Q Consensus       357 ~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  436 (728)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (293)
T d1yhwa1         171 --------------------------------------------------------------------------------  170 (293)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCCCCCCc
Q 004835          437 ERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNKGPSDL  516 (728)
Q Consensus       437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  516 (728)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (293)
T d1yhwa1         171 --------------------------------------------------------------------------------  170 (293)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCCCCCCC
Q 004835          517 SDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGDP  596 (728)
Q Consensus       517 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~PF~~~~  596 (728)
                                                   ......+||+.|+|||++.+. .|+.++|||||||++|+|++|++||.+.+
T Consensus       171 -----------------------------~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DiwSlGvilyemltG~~Pf~~~~  220 (293)
T d1yhwa1         171 -----------------------------SKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMIEGEPPYLNEN  220 (293)
T ss_dssp             -----------------------------CCBCCCCSCGGGCCHHHHSSS-CBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             -----------------------------ccccccccCCCccChhhhcCC-CCCchhceehHhHHHHHHhhCCCCCCCCC
Confidence                                         011245799999999999654 46999999999999999999999998877


Q ss_pred             hHH-HHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcccCCCC
Q 004835          597 EQN-IKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNPRL  675 (728)
Q Consensus       597 ~~~-l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~~dP~~  675 (728)
                      ... +..+.. .+.                                       ....++..+++.+.+||.+||..||++
T Consensus       221 ~~~~~~~~~~-~~~---------------------------------------~~~~~~~~~s~~~~~li~~~L~~dP~~  260 (293)
T d1yhwa1         221 PLRALYLIAT-NGT---------------------------------------PELQNPEKLSAIFRDFLNRCLDMDVEK  260 (293)
T ss_dssp             HHHHHHHHHH-HCS---------------------------------------CCCSSGGGSCHHHHHHHHHHTCSSTTT
T ss_pred             HHHHHHHHHh-CCC---------------------------------------CCCCCcccCCHHHHHHHHHHccCChhH
Confidence            643 333221 110                                       012234568899999999999999999


Q ss_pred             CCCHHHHhcCCCCccch
Q 004835          676 RISAEDALKHEFFAPCH  692 (728)
Q Consensus       676 Rpta~e~L~Hp~f~~~~  692 (728)
                      ||||+|+|+||||+...
T Consensus       261 R~s~~eil~Hp~~~~~~  277 (293)
T d1yhwa1         261 RGSAKELLQHQFLKIAK  277 (293)
T ss_dssp             SCCHHHHTTCGGGGGCC
T ss_pred             CcCHHHHhcCHhhCCCC
Confidence            99999999999997543


No 4  
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-52  Score=452.92  Aligned_cols=264  Identities=24%  Similarity=0.361  Sum_probs=223.9

Q ss_pred             CCCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc-----CchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeE
Q 004835          199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN-----ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDC  273 (728)
Q Consensus       199 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~-----~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~  273 (728)
                      .+++|++++.||+|+||.||+|+++.+|+.||||++.+.     .....+.+|+.+|++++||| |++++++|.+.+.+|
T Consensus         3 ~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~-Iv~l~~~~~~~~~~~   81 (337)
T d1o6la_           3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF-LTALKYAFQTHDRLC   81 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTT-BCCEEEEEECSSEEE
T ss_pred             chHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCC-EEEEEeeeccccccc
Confidence            467899999999999999999999999999999998742     34567889999999999999 999999999999999


Q ss_pred             EEEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCC
Q 004835          274 FVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSF  350 (728)
Q Consensus       274 LV~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~  350 (728)
                      +||||+.++.+..+..   .+++..++.++.||+.||+|||++|||||||||+||||+ .++.+||+|||+|+.....  
T Consensus        82 iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~-~~g~vkl~DFG~a~~~~~~--  158 (337)
T d1o6la_          82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISD--  158 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-TTSCEEECCCTTCBCSCCT--
T ss_pred             cceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEec-CCCCEEEeecccccccccC--
Confidence            9999999999876654   389999999999999999999999999999999999999 6678999999999742100  


Q ss_pred             ccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccccccc
Q 004835          351 NQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEAT  430 (728)
Q Consensus       351 ~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~  430 (728)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (337)
T d1o6la_         159 --------------------------------------------------------------------------------  158 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCC
Q 004835          431 STRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMN  510 (728)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (728)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (337)
T d1o6la_         159 --------------------------------------------------------------------------------  158 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCC
Q 004835          511 KGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRT  590 (728)
Q Consensus       511 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~  590 (728)
                                                        .......+||+.|+|||++.+.. |+.++|||||||++|||++|++
T Consensus       159 ----------------------------------~~~~~~~~GT~~Y~aPE~~~~~~-y~~~~DiwSlGvilyeml~G~~  203 (337)
T d1o6la_         159 ----------------------------------GATMKTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRL  203 (337)
T ss_dssp             ----------------------------------TCCBCCCEECGGGCCGGGGSSSC-BCTTHHHHHHHHHHHHHHHSSC
T ss_pred             ----------------------------------CcccccceeCHHHhhhhhccCCC-CChhhcccchhhHHHHHHHCCC
Confidence                                              00112457999999999996655 6999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcc
Q 004835          591 PFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT  670 (728)
Q Consensus       591 PF~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~  670 (728)
                      ||.+.+...+...+.                                          ...+.++..+++++.|||.+||+
T Consensus       204 pf~~~~~~~~~~~i~------------------------------------------~~~~~~p~~~s~~~~dli~~~L~  241 (337)
T d1o6la_         204 PFYNQDHERLFELIL------------------------------------------MEEIRFPRTLSPEAKSLLAGLLK  241 (337)
T ss_dssp             SSCCSSHHHHHHHHH------------------------------------------HCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             CCCCcCHHHHHHHHh------------------------------------------cCCCCCCccCCHHHHHHHHhhcc
Confidence            999988766544331                                          12334556789999999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCCCccchhcchHhHhhhc
Q 004835          671 VNPRLRIS-----AEDALKHEFFAPCHEMLRKQKLLRQ  703 (728)
Q Consensus       671 ~dP~~Rpt-----a~e~L~Hp~f~~~~~~~~~~~~~~~  703 (728)
                      +||.+|++     ++|+++||||+++.+....++.+.+
T Consensus       242 ~dP~~R~~~~~~~~~eil~Hp~f~~i~~~~l~~~~~~~  279 (337)
T d1o6la_         242 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP  279 (337)
T ss_dssp             SSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCC
T ss_pred             CCchhhcccccccHHHHHcCcccccCCHHHHHhCCCCC
Confidence            99999994     9999999999998876555544443


No 5  
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.2e-54  Score=458.74  Aligned_cols=143  Identities=27%  Similarity=0.372  Sum_probs=130.2

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc---CchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEE
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVL  276 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~---~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~  276 (728)
                      -++|++++.||+|+||+||+|+++.+|+.||||+++..   .....+.+|+.+|++++||| |++++++|.+.+.+|+||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-IVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTT-BCCEEEEEECSSEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCC-CCcEEEEEEECCEEEEEE
Confidence            36899999999999999999999999999999998753   23457889999999999999 999999999999999999


Q ss_pred             eccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          277 EHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHK-QGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       277 E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs-~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      ||+.+++|..+..   .+++..++.++.||+.||.|||+ +||+||||||+||||+ +++.+||+|||+|+.
T Consensus        84 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~-~~~~vkl~DFGla~~  154 (322)
T d1s9ja_          84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQ  154 (322)
T ss_dssp             ECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC-TTCCEEECCCCCCHH
T ss_pred             EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeEC-CCCCEEEeeCCCccc
Confidence            9999998887653   49999999999999999999997 4999999999999999 667899999999974


No 6  
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.5e-53  Score=447.16  Aligned_cols=256  Identities=27%  Similarity=0.345  Sum_probs=214.4

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccC-----cCchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEE
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHA-----NASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFV  275 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~-----~~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV  275 (728)
                      ++|++++.||+|+||+||+|+++.+|+.||||++..     ......+.+|+.++++++||| |++++++|.+.+..|+|
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~~~~~~~~~~~iv   86 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF-FVKLYFTFQDDEKLYFG   86 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTT-BCCEEEEEECSSEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCC-eeEEEEEEEECCEEEEE
Confidence            579999999999999999999999999999999863     234567889999999999999 99999999999999999


Q ss_pred             EeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCCcc
Q 004835          276 LEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQ  352 (728)
Q Consensus       276 ~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~~~  352 (728)
                      |||+.++++..+..   .+++..++.++.||+.||+|||++|||||||||+||||+ +++.+||+|||+|+......   
T Consensus        87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~-~~~~vkl~DFG~a~~~~~~~---  162 (288)
T d1uu3a_          87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPES---  162 (288)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTSCEEECCCTTCEECC------
T ss_pred             EEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccC-CCceEEecccccceecccCC---
Confidence            99999988866543   499999999999999999999999999999999999999 66789999999997521100   


Q ss_pred             ccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccccccccc
Q 004835          353 ATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATST  432 (728)
Q Consensus       353 ~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~  432 (728)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (288)
T d1uu3a_         163 --------------------------------------------------------------------------------  162 (288)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCCC
Q 004835          433 RTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNKG  512 (728)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (728)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (288)
T d1uu3a_         163 --------------------------------------------------------------------------------  162 (288)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCCC
Q 004835          513 PSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF  592 (728)
Q Consensus       513 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~PF  592 (728)
                                                     ........+||+.|+|||++.+.. |+.++|||||||++|||++|++||
T Consensus       163 -------------------------------~~~~~~~~~GT~~Y~APE~~~~~~-~~~~~DiwSlGvilyell~g~~Pf  210 (288)
T d1uu3a_         163 -------------------------------KQARANSFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPF  210 (288)
T ss_dssp             --------------------------------------CCCCGGGCCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             -------------------------------cccccccccCCccccCceeeccCC-CCcccceehhhHHHHHHhhCCCCC
Confidence                                           000112457999999999996554 699999999999999999999999


Q ss_pred             CCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcccC
Q 004835          593 FGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN  672 (728)
Q Consensus       593 ~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~~d  672 (728)
                      .+.+...+...+.                                          ...+.+++.+++++.+||.+||..|
T Consensus       211 ~~~~~~~~~~~i~------------------------------------------~~~~~~p~~~s~~~~~li~~~L~~d  248 (288)
T d1uu3a_         211 RAGNEYLIFQKII------------------------------------------KLEYDFPEKFFPKARDLVEKLLVLD  248 (288)
T ss_dssp             CCSSHHHHHHHHH------------------------------------------TTCCCCCTTCCHHHHHHHHTTSCSS
T ss_pred             CCcCHHHHHHHHH------------------------------------------cCCCCCCccCCHHHHHHHHHHccCC
Confidence            9877655433221                                          1223445678899999999999999


Q ss_pred             CCCCCCHHH------HhcCCCCccchhcc
Q 004835          673 PRLRISAED------ALKHEFFAPCHEML  695 (728)
Q Consensus       673 P~~Rpta~e------~L~Hp~f~~~~~~~  695 (728)
                      |++|||++|      +++||||+++.+..
T Consensus       249 P~~R~t~~e~~~~~~i~~Hpff~~i~w~~  277 (288)
T d1uu3a_         249 ATKRLGCEEMEGYGPLKAHPFFESVTWEN  277 (288)
T ss_dssp             GGGSTTSGGGTCHHHHHTSGGGTTCCCTT
T ss_pred             HhHCcCHHHHcCCHHHHcCCccCCCCHHH
Confidence            999999988      58899999998653


No 7  
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-52  Score=443.42  Aligned_cols=279  Identities=27%  Similarity=0.384  Sum_probs=219.6

Q ss_pred             EEEEecccCceEEEEEEEcCCCeEEEEEeccCcC-------chhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEe
Q 004835          205 VEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA-------SKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLE  277 (728)
Q Consensus       205 i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~-------~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E  277 (728)
                      .+++||+|+||+||+|+++.+|+.||||+++...       ....+.+|+.+|++++|+| |+++++++..++..|+|||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpn-Iv~~~~~~~~~~~~~ivmE   80 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN-IIGLLDAFGHKSNISLVFD   80 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTT-BCCEEEEECCTTCCEEEEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCC-EeEEEeeeccCCceeehhh
Confidence            4689999999999999999999999999986432       1346889999999999999 9999999999999999999


Q ss_pred             ccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCCcccc
Q 004835          278 HVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQAT  354 (728)
Q Consensus       278 ~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~~~~~  354 (728)
                      |+.++++..+..   .+++..++.++.||+.||+|||++||+||||||+|||++ ..+.+||+|||+|+......     
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~-~~~~~KL~DFG~a~~~~~~~-----  154 (299)
T d1ua2a_          81 FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD-ENGVLKLADFGLAKSFGSPN-----  154 (299)
T ss_dssp             CCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTCCEEECCCGGGSTTTSCC-----
T ss_pred             hhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEec-CCCccccccCccccccCCCc-----
Confidence            999988777654   389999999999999999999999999999999999999 66789999999996421000     


Q ss_pred             CCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCccccccccccCC
Q 004835          355 LPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATSTRT  434 (728)
Q Consensus       355 ~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  434 (728)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (299)
T d1ua2a_         155 --------------------------------------------------------------------------------  154 (299)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCCCCC
Q 004835          435 PAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNKGPS  514 (728)
Q Consensus       435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (728)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (299)
T d1ua2a_         155 --------------------------------------------------------------------------------  154 (299)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCCCCC
Q 004835          515 DLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFG  594 (728)
Q Consensus       515 d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~PF~~  594 (728)
                                                     ......+||+.|+|||++.+...|+.++|||||||++|||++|.+||.+
T Consensus       155 -------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~  203 (299)
T d1ua2a_         155 -------------------------------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG  203 (299)
T ss_dssp             -------------------------------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -------------------------------ccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCC
Confidence                                           0111347999999999998777789999999999999999999999998


Q ss_pred             CCh-HHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcccCC
Q 004835          595 DPE-QNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNP  673 (728)
Q Consensus       595 ~~~-~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~~dP  673 (728)
                      .+. +.+..|.+.+|++.........    ..+.. ......+...   +.       .....+++++.|||.+||++||
T Consensus       204 ~~~~~~l~~i~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~---~~-------~~~~~~s~~~~dll~~~L~~dP  268 (299)
T d1ua2a_         204 DSDLDQLTRIFETLGTPTEEQWPDMC----SLPDY-VTFKSFPGIP---LH-------HIFSAAGDDLLDLIQGLFLFNP  268 (299)
T ss_dssp             SSHHHHHHHHHHHHCCCCTTTSSSTT----SSTTC-CCCCCCCCCC---HH-------HHCTTCCHHHHHHHHHHHCSST
T ss_pred             CCHHHHHHHHHHhcCCCChhhccchh----ccchh-hhhccCCCCC---hH-------HhcccCCHHHHHHHHHHccCCh
Confidence            776 6688888888865431110000    00000 0001111111   11       1224578899999999999999


Q ss_pred             CCCCCHHHHhcCCCCccchhcch
Q 004835          674 RLRISAEDALKHEFFAPCHEMLR  696 (728)
Q Consensus       674 ~~Rpta~e~L~Hp~f~~~~~~~~  696 (728)
                      ++||||+|+|+||||++.+.+..
T Consensus       269 ~~R~sa~e~L~Hp~f~~~p~p~~  291 (299)
T d1ua2a_         269 CARITATQALKMKYFSNRPGPTP  291 (299)
T ss_dssp             TTSCCHHHHHTSGGGTSSSCCCC
T ss_pred             hhCcCHHHHhCCHhhCCCCCCCC
Confidence            99999999999999998765443


No 8  
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=4.5e-52  Score=444.14  Aligned_cols=254  Identities=22%  Similarity=0.316  Sum_probs=216.4

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccC-----cCchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEE
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHA-----NASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCF  274 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~-----~~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~L  274 (728)
                      +++|++++.||+|+||+||+|+++.+|+.||||+++.     ....+.+.+|+.+++.++||| |+++++++.+++.+|+
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~~~~~~~~~~~~~i   81 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF-IIRMWGTFQDAQQIFM   81 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTT-BCCEEEEEECSSEEEE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcC-hhheeeeEeeCCeeee
Confidence            5689999999999999999999999999999999863     234567889999999999999 9999999999999999


Q ss_pred             EEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCCc
Q 004835          275 VLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFN  351 (728)
Q Consensus       275 V~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~~  351 (728)
                      ||||+.++++..+..   .+++..++.++.||+.||.|||++|||||||||+||||+ .++.+||+|||+|+....    
T Consensus        82 vmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~-~~g~vkL~DFG~a~~~~~----  156 (316)
T d1fota_          82 IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD-KNGHIKITDFGFAKYVPD----  156 (316)
T ss_dssp             EECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC-TTSCEEECCCSSCEECSS----
T ss_pred             EeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEc-CCCCEEEecCccceEecc----
Confidence            999999998877653   378899999999999999999999999999999999999 667899999999975210    


Q ss_pred             cccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCccccccccc
Q 004835          352 QATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATS  431 (728)
Q Consensus       352 ~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~  431 (728)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (316)
T d1fota_         157 --------------------------------------------------------------------------------  156 (316)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCC
Q 004835          432 TRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNK  511 (728)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (728)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (316)
T d1fota_         157 --------------------------------------------------------------------------------  156 (316)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCC
Q 004835          512 GPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTP  591 (728)
Q Consensus       512 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~P  591 (728)
                                                         .....+||+.|+|||++.+.. |+.++|||||||++|+|++|+.|
T Consensus       157 -----------------------------------~~~~~~Gt~~Y~APE~l~~~~-y~~~~DiwSlGvilyemltG~~P  200 (316)
T d1fota_         157 -----------------------------------VTYTLCGTPDYIAPEVVSTKP-YNKSIDWWSFGILIYEMLAGYTP  200 (316)
T ss_dssp             -----------------------------------CBCCCCSCTTTCCHHHHTTCC-BCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             -----------------------------------ccccccCcccccCHHHHcCCC-CCchhhccccchhHHHHHhCCCC
Confidence                                               001346999999999995554 69999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhccc
Q 004835          592 FFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV  671 (728)
Q Consensus       592 F~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~~  671 (728)
                      |.+.+...+...+.                                          .....++..+++++.+||.+||..
T Consensus       201 f~~~~~~~~~~~i~------------------------------------------~~~~~~p~~~s~~~~~li~~~L~~  238 (316)
T d1fota_         201 FYDSNTMKTYEKIL------------------------------------------NAELRFPPFFNEDVKDLLSRLITR  238 (316)
T ss_dssp             TCCSSHHHHHHHHH------------------------------------------HCCCCCCTTSCHHHHHHHHHHTCS
T ss_pred             CCCcCHHHHHHHHH------------------------------------------cCCCCCCCCCCHHHHHHHHHHhhh
Confidence            99877654433221                                          112334456789999999999999


Q ss_pred             CCCCCC-----CHHHHhcCCCCccchhcchH
Q 004835          672 NPRLRI-----SAEDALKHEFFAPCHEMLRK  697 (728)
Q Consensus       672 dP~~Rp-----ta~e~L~Hp~f~~~~~~~~~  697 (728)
                      ||.+|+     |++++|+||||+++.+....
T Consensus       239 dp~~R~~~~r~t~~~il~Hp~f~~i~~~~l~  269 (316)
T d1fota_         239 DLSQRLGNLQNGTEDVKNHPWFKEVVWEKLL  269 (316)
T ss_dssp             CTTTCTTSSTTTTHHHHTSGGGSSCCHHHHH
T ss_pred             CHHhccccchhhHHHHHcCcccccCCHHHHH
Confidence            999996     89999999999999865433


No 9  
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-52  Score=440.37  Aligned_cols=142  Identities=25%  Similarity=0.345  Sum_probs=129.8

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc--CchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEec
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN--ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH  278 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~--~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E~  278 (728)
                      +.|++++.||+|+||+||+|+++.+|+.||||++...  ...+.+.+|+.+|++++||| |+++++++.+.+..|+||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN-IVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTT-BCCEEEEEEETTEEEEEEEC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCC-CCeEEEEEeeCCeEEEEEec
Confidence            4699999999999999999999999999999998653  33467889999999999999 99999999999999999999


Q ss_pred             cCCCChHHHhh----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          279 VKHDRPEVLKK----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       279 ~~~~~l~~l~~----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      +.++++..+..    .+++..++.++.||+.||.|||++|||||||||+||||+ .++.+||+|||+|+.
T Consensus        91 ~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~-~~~~~Kl~DFG~a~~  159 (288)
T d2jfla1          91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT-LDGDIKLADFGVSAK  159 (288)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTSCEEECCCTTCEE
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC-CCCCEEEEechhhhc
Confidence            99999877642    389999999999999999999999999999999999999 667899999999864


No 10 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.7e-52  Score=438.11  Aligned_cols=285  Identities=27%  Similarity=0.377  Sum_probs=225.7

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC----chhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEE
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA----SKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFV  275 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~----~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV  275 (728)
                      +++|++++.||+|+||+||+|+++.+|+.||||+++...    ....+.+|+.+|++++|+| |++++++|.+++..|+|
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~-Iv~~~~~~~~~~~~~iv   79 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-IVKLLDVIHTENKLYLV   79 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTT-BCCEEEEEEETTEEEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCc-EEEeccccccccceeEE
Confidence            479999999999999999999999999999999986432    3567889999999999999 99999999999999999


Q ss_pred             EeccCCCChHHHhh----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCCc
Q 004835          276 LEHVKHDRPEVLKK----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFN  351 (728)
Q Consensus       276 ~E~~~~~~l~~l~~----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~~  351 (728)
                      |||+.++++..+..    .+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||+|||+|+.....   
T Consensus        80 ~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~-~~~~~kl~DFG~a~~~~~~---  155 (298)
T d1gz8a_          80 FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVP---  155 (298)
T ss_dssp             EECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTSCEEECSTTHHHHHCCC---
T ss_pred             EeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeec-ccCcceeccCCcceeccCC---
Confidence            99999887665532    389999999999999999999999999999999999999 6668999999999752100   


Q ss_pred             cccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCccccccccc
Q 004835          352 QATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATS  431 (728)
Q Consensus       352 ~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~  431 (728)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (298)
T d1gz8a_         156 --------------------------------------------------------------------------------  155 (298)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCC
Q 004835          432 TRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNK  511 (728)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (728)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (298)
T d1gz8a_         156 --------------------------------------------------------------------------------  155 (298)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCC
Q 004835          512 GPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTP  591 (728)
Q Consensus       512 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~P  591 (728)
                                                       .......+||+.|+|||++.....++.++|||||||++|+|++|+.|
T Consensus       156 ---------------------------------~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~P  202 (298)
T d1gz8a_         156 ---------------------------------VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL  202 (298)
T ss_dssp             ---------------------------------SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ---------------------------------cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCC
Confidence                                             00112446999999999998887779999999999999999999999


Q ss_pred             CCCCCh-HHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcc
Q 004835          592 FFGDPE-QNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT  670 (728)
Q Consensus       592 F~~~~~-~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~  670 (728)
                      |.+.+. +.+..++...|.+............    .   .....+......+       ......+++++.|||.+||.
T Consensus       203 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~-------~~~~~~~s~~~~dll~~mL~  268 (298)
T d1gz8a_         203 FPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP----D---YKPSFPKWARQDF-------SKVVPPLDEDGRSLLSQMLH  268 (298)
T ss_dssp             CCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST----T---CCTTSCCCCCCCH-------HHHSTTCCHHHHHHHHHHTC
T ss_pred             CCCCCHHHHHHHHHHhcCCCchhhcccccccc----c---cccccccccccch-------hhhccCCCHHHHHHHHHHcc
Confidence            998775 5677888877764322111111000    0   0000111111111       11224678899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCccchhcch
Q 004835          671 VNPRLRISAEDALKHEFFAPCHEMLR  696 (728)
Q Consensus       671 ~dP~~Rpta~e~L~Hp~f~~~~~~~~  696 (728)
                      +||++||||+|+|+||||++++.+..
T Consensus       269 ~dP~~R~t~~ell~H~ff~~~~~p~p  294 (298)
T d1gz8a_         269 YDPNKRISAKAALAHPFFQDVTKPVP  294 (298)
T ss_dssp             SSTTTSCCHHHHHTSGGGTTCCCCCC
T ss_pred             CChhHCcCHHHHhCCHhhccCCCCCC
Confidence            99999999999999999999877654


No 11 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=8.6e-52  Score=450.30  Aligned_cols=263  Identities=23%  Similarity=0.358  Sum_probs=214.9

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc-----CchhHHHHH---HHHHHhcCCCCceEEecceEEeCCe
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN-----ASKHYVSNE---LRMLERFGGKNFIIKYEGCFKCGDS  271 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~-----~~~~~~~~E---i~iL~~L~h~n~Ivkl~~~~~~~~~  271 (728)
                      +++|++++.||+|+||.||+|+++.+|+.||||++...     .....+.+|   +.+++.+.||| |++++++|...+.
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpn-Iv~l~~~~~~~~~   81 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF-IVCMSYAFHTPDK   81 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTT-BCCEEEEEECSSE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCc-EEEEEEEEEECCE
Confidence            67999999999999999999999999999999998632     222334444   66677778998 9999999999999


Q ss_pred             eEEEEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCC
Q 004835          272 DCFVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDG  348 (728)
Q Consensus       272 ~~LV~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~  348 (728)
                      +|+||||+.+++|..++.   .+++..++.|+.||+.||.|||++|||||||||+||||+ ..+.+||+|||+|+.....
T Consensus        82 ~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~-~~g~iKl~DFGla~~~~~~  160 (364)
T d1omwa3          82 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKK  160 (364)
T ss_dssp             EEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-SSSCEEECCCTTCEECSSS
T ss_pred             EEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEc-CCCcEEEeeeceeeecCCC
Confidence            999999999999877654   388999999999999999999999999999999999999 6678999999999742100


Q ss_pred             CCccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccccc
Q 004835          349 SFNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKE  428 (728)
Q Consensus       349 ~~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~  428 (728)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (364)
T d1omwa3         161 --------------------------------------------------------------------------------  160 (364)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCC
Q 004835          429 ATSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGL  508 (728)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (728)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (364)
T d1omwa3         161 --------------------------------------------------------------------------------  160 (364)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcC
Q 004835          509 MNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIG  588 (728)
Q Consensus       509 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG  588 (728)
                                                            .....+||+.|+|||++.+...|+.++|||||||++|||++|
T Consensus       161 --------------------------------------~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG  202 (364)
T d1omwa3         161 --------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG  202 (364)
T ss_dssp             --------------------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             --------------------------------------cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhC
Confidence                                                  011346999999999997666689999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHh
Q 004835          589 RTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC  668 (728)
Q Consensus       589 ~~PF~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~  668 (728)
                      +.||.+........+.+..                                       ....+.++..+++++.+||.+|
T Consensus       203 ~~Pf~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~s~~~~~li~~~  243 (364)
T d1omwa3         203 HSPFRQHKTKDKHEIDRMT---------------------------------------LTMAVELPDSFSPELRSLLEGL  243 (364)
T ss_dssp             SCSSCSSCSSCHHHHHHHS---------------------------------------SSCCCCCCSSSCHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHhc---------------------------------------ccCCCCCCCCCCHHHHHHHHHH
Confidence            9999876543332222210                                       1122344567899999999999


Q ss_pred             cccCCCCCCC-----HHHHhcCCCCccchhcchHhHhh
Q 004835          669 LTVNPRLRIS-----AEDALKHEFFAPCHEMLRKQKLL  701 (728)
Q Consensus       669 L~~dP~~Rpt-----a~e~L~Hp~f~~~~~~~~~~~~~  701 (728)
                      |..||++|||     |+|+++||||+++.+.....+.+
T Consensus       244 L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~  281 (364)
T d1omwa3         244 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKY  281 (364)
T ss_dssp             TCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCS
T ss_pred             cccCHHHhCCCcccCHHHHHcCccccCCCHHHHhcCCC
Confidence            9999999999     89999999999998765544433


No 12 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=9.4e-52  Score=447.73  Aligned_cols=257  Identities=23%  Similarity=0.349  Sum_probs=213.7

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC--chhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEe
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA--SKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLE  277 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~--~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E  277 (728)
                      +++|++++.||+|+||+||+|+++.+|+.||||++....  ..+.+.+|+.+|++++||| |++++++|.+.+.+|+|||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~~~~~~~~~~~~~ivmE  103 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT-LVNLHDAFEDDNEMVMIYE  103 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTT-BCCEEEEEEETTEEEEEEC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCC-CCcEEEEEEECCEEEEEEE
Confidence            578999999999999999999999999999999987543  3456889999999999999 9999999999999999999


Q ss_pred             ccCCCChHHHh-h---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeec-CCCceEEEeeeccccccCCCCcc
Q 004835          278 HVKHDRPEVLK-K---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSC-KAVKGYLIDFNLAMVGFDGSFNQ  352 (728)
Q Consensus       278 ~~~~~~l~~l~-~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~-~~~~~kL~DFGlA~~~~~~~~~~  352 (728)
                      |+.+++|..+. +   .+++..++.|+.||+.||.|||++|||||||||+||||+. .++.+||+|||+|+......   
T Consensus       104 ~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~---  180 (350)
T d1koaa2         104 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---  180 (350)
T ss_dssp             CCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS---
T ss_pred             cCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheeccccc---
Confidence            99999886654 2   3899999999999999999999999999999999999974 35689999999997521100   


Q ss_pred             ccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccccccccc
Q 004835          353 ATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATST  432 (728)
Q Consensus       353 ~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~  432 (728)
                                                                                                      
T Consensus       181 --------------------------------------------------------------------------------  180 (350)
T d1koaa2         181 --------------------------------------------------------------------------------  180 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCCC
Q 004835          433 RTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNKG  512 (728)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (728)
                                                                                                      
T Consensus       181 --------------------------------------------------------------------------------  180 (350)
T d1koaa2         181 --------------------------------------------------------------------------------  180 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCCC
Q 004835          513 PSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF  592 (728)
Q Consensus       513 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~PF  592 (728)
                                                        .....+||+.|||||++.+.. |+.++||||||||+|+|++|++||
T Consensus       181 ----------------------------------~~~~~~gT~~Y~aPEv~~~~~-~~~~~DiwSlGvilyell~G~~Pf  225 (350)
T d1koaa2         181 ----------------------------------SVKVTTGTAEFAAPEVAEGKP-VGYYTDMWSVGVLSYILLSGLSPF  225 (350)
T ss_dssp             ----------------------------------CEEEECSCTTTCCHHHHHTCC-BCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ----------------------------------ccceecCcccccCHHHHcCCC-CChhHhhhhhhHHHHHHHhCCCCC
Confidence                                              001346899999999996654 699999999999999999999999


Q ss_pred             CCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcccC
Q 004835          593 FGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN  672 (728)
Q Consensus       593 ~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~~d  672 (728)
                      .+.+...+...+...              ...+                        .......+++++.+||.+||.+|
T Consensus       226 ~~~~~~~~~~~i~~~--------------~~~~------------------------~~~~~~~~s~~~~~li~~~L~~d  267 (350)
T d1koaa2         226 GGENDDETLRNVKSC--------------DWNM------------------------DDSAFSGISEDGKDFIRKLLLAD  267 (350)
T ss_dssp             CCSSHHHHHHHHHHT--------------CCCS------------------------CCGGGGGCCHHHHHHHHHHCCSS
T ss_pred             CCCCHHHHHHHHHhC--------------CCCC------------------------CcccccCCCHHHHHHHHHHccCC
Confidence            988775443322110              0000                        11223467899999999999999


Q ss_pred             CCCCCCHHHHhcCCCCccchh
Q 004835          673 PRLRISAEDALKHEFFAPCHE  693 (728)
Q Consensus       673 P~~Rpta~e~L~Hp~f~~~~~  693 (728)
                      |++|||++|+|+||||++.+.
T Consensus       268 P~~R~t~~eil~hp~~~~~~~  288 (350)
T d1koaa2         268 PNTRMTIHQALEHPWLTPGNA  288 (350)
T ss_dssp             GGGSCCHHHHHHSTTTSCTTC
T ss_pred             hhHCcCHHHHhcCcccCCCCC
Confidence            999999999999999997654


No 13 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=5.9e-52  Score=441.52  Aligned_cols=253  Identities=25%  Similarity=0.412  Sum_probs=198.9

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc---CchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEe
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLE  277 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~---~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E  277 (728)
                      +.|++.+.||+|+||+||+|+++.+|+.||||++...   .....+.+|+.+|++++||| |+++++++.+++.+|+|||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN-IVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTT-BCCEEEEEECSSEEEEEEC
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCC-CCcEEEEEEECCEEEEEEe
Confidence            4699999999999999999999999999999998753   23355779999999999999 9999999999999999999


Q ss_pred             ccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeec--CCCceEEEeeeccccccCCCCcc
Q 004835          278 HVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSC--KAVKGYLIDFNLAMVGFDGSFNQ  352 (728)
Q Consensus       278 ~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~--~~~~~kL~DFGlA~~~~~~~~~~  352 (728)
                      |+++++|..++.   .+++..+..++.||+.||+|||++|||||||||+|||+..  +++.+||+|||+|+.....    
T Consensus        88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~----  163 (307)
T d1a06a_          88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG----  163 (307)
T ss_dssp             CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred             ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCC----
Confidence            999988876653   3999999999999999999999999999999999999963  4578999999999742100    


Q ss_pred             ccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccccccccc
Q 004835          353 ATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATST  432 (728)
Q Consensus       353 ~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~  432 (728)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (307)
T d1a06a_         164 --------------------------------------------------------------------------------  163 (307)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCCC
Q 004835          433 RTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNKG  512 (728)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (728)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (307)
T d1a06a_         164 --------------------------------------------------------------------------------  163 (307)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCCC
Q 004835          513 PSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF  592 (728)
Q Consensus       513 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~PF  592 (728)
                                                       ......+||+.|+|||++.+. .|+.++|||||||++|||++|++||
T Consensus       164 ---------------------------------~~~~~~~GT~~y~APE~~~~~-~~~~~~DiwSlGvilyell~g~~Pf  209 (307)
T d1a06a_         164 ---------------------------------SVLSTACGTPGYVAPEVLAQK-PYSKAVDCWSIGVIAYILLCGYPPF  209 (307)
T ss_dssp             ------------------------------------------CTTSCHHHHTTC-CCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ---------------------------------CeeeeeeeCccccCcHHHcCC-CCCcHHHhhhhhHHHHHHHhCCCCC
Confidence                                             001134699999999999655 4799999999999999999999999


Q ss_pred             CCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcccC
Q 004835          593 FGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN  672 (728)
Q Consensus       593 ~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~~d  672 (728)
                      .+.....+...+.. +             ...+                        ....+..+++++.+||.+||..|
T Consensus       210 ~~~~~~~~~~~i~~-~-------------~~~~------------------------~~~~~~~~s~~~~~li~~~L~~d  251 (307)
T d1a06a_         210 YDENDAKLFEQILK-A-------------EYEF------------------------DSPYWDDISDSAKDFIRHLMEKD  251 (307)
T ss_dssp             CCSSHHHHHHHHHT-T-------------CCCC------------------------CTTTTTTSCHHHHHHHHHHSCSS
T ss_pred             CCCCHHHHHHHHhc-c-------------CCCC------------------------CCccccCCCHHHHHHHHHHccCC
Confidence            98776554332210 0             0000                        11223567899999999999999


Q ss_pred             CCCCCCHHHHhcCCCCcc
Q 004835          673 PRLRISAEDALKHEFFAP  690 (728)
Q Consensus       673 P~~Rpta~e~L~Hp~f~~  690 (728)
                      |++|||++|+|+||||++
T Consensus       252 P~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         252 PEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             GGGSCCHHHHHHSTTTTS
T ss_pred             HhHCcCHHHHhcCHhhCC
Confidence            999999999999999985


No 14 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-51  Score=434.00  Aligned_cols=256  Identities=24%  Similarity=0.362  Sum_probs=210.6

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc--------CchhHHHHHHHHHHhcCCCCceEEecceEEeCCee
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN--------ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSD  272 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~--------~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~  272 (728)
                      +.|++++.||+|+||+||+|+++.+|+.||||++...        ...+.+.+|+.+|++++||| |++++++|.+.+.+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~~~~~~~~~~~~   88 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN-VITLHEVYENKTDV   88 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTT-BCCEEEEEECSSEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCC-CCcEEEEEEECCEE
Confidence            4699999999999999999999999999999998632        12456889999999999999 99999999999999


Q ss_pred             EEEEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCC---ceEEEeeecccccc
Q 004835          273 CFVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV---KGYLIDFNLAMVGF  346 (728)
Q Consensus       273 ~LV~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~---~~kL~DFGlA~~~~  346 (728)
                      |+|||||.+++|..++.   .+++..++.++.||+.||+|||++|||||||||+|||++.++.   .+||+|||+|....
T Consensus        89 ~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~  168 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID  168 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECT
T ss_pred             EEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcC
Confidence            99999999998877653   3999999999999999999999999999999999999984442   58999999997521


Q ss_pred             CCCCccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccc
Q 004835          347 DGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSA  426 (728)
Q Consensus       347 ~~~~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~  426 (728)
                      ..                                                                              
T Consensus       169 ~~------------------------------------------------------------------------------  170 (293)
T d1jksa_         169 FG------------------------------------------------------------------------------  170 (293)
T ss_dssp             TS------------------------------------------------------------------------------
T ss_pred             CC------------------------------------------------------------------------------
Confidence            00                                                                              


Q ss_pred             ccccccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccC
Q 004835          427 KEATSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGA  506 (728)
Q Consensus       427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (728)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (293)
T d1jksa_         171 --------------------------------------------------------------------------------  170 (293)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHh
Q 004835          507 GLMNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLM  586 (728)
Q Consensus       507 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLl  586 (728)
                                                             ......+||+.|+|||++.+. .++.++|||||||++|||+
T Consensus       171 ---------------------------------------~~~~~~~~t~~y~APE~~~~~-~~~~~~DiwSlGvilyell  210 (293)
T d1jksa_         171 ---------------------------------------NEFKNIFGTPEFVAPEIVNYE-PLGLEADMWSIGVITYILL  210 (293)
T ss_dssp             ---------------------------------------CBCSCCCCCGGGCCHHHHTTC-CBCTHHHHHHHHHHHHHHH
T ss_pred             ---------------------------------------ccccccCCCCcccCHHHHcCC-CCCCcccchhhhHHHHHHH
Confidence                                                   001134689999999999554 4699999999999999999


Q ss_pred             cCCCCCCCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHH
Q 004835          587 IGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD  666 (728)
Q Consensus       587 tG~~PF~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~  666 (728)
                      +|+.||.+.+...+...+..              ....++                        ..++..+++.+.+||.
T Consensus       211 ~g~~Pf~~~~~~~~~~~i~~--------------~~~~~~------------------------~~~~~~~s~~~~~li~  252 (293)
T d1jksa_         211 SGASPFLGDTKQETLANVSA--------------VNYEFE------------------------DEYFSNTSALAKDFIR  252 (293)
T ss_dssp             HSSCSSCCSSHHHHHHHHHT--------------TCCCCC------------------------HHHHTTSCHHHHHHHH
T ss_pred             cCCCCCCCCCHHHHHHHHHh--------------cCCCCC------------------------chhcCCCCHHHHHHHH
Confidence            99999998877554332210              011111                        1223567899999999


Q ss_pred             HhcccCCCCCCCHHHHhcCCCCccchh
Q 004835          667 KCLTVNPRLRISAEDALKHEFFAPCHE  693 (728)
Q Consensus       667 ~~L~~dP~~Rpta~e~L~Hp~f~~~~~  693 (728)
                      +||..||++|||++|+|+||||++..+
T Consensus       253 ~~L~~dP~~R~s~~eil~hp~~~~~~~  279 (293)
T d1jksa_         253 RLLVKDPKKRMTIQDSLQHPWIKPKDT  279 (293)
T ss_dssp             TTSCSSGGGSCCHHHHHHSTTTCC---
T ss_pred             HHccCChhHCcCHHHHhcCcccCCCCh
Confidence            999999999999999999999987653


No 15 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.6e-51  Score=445.92  Aligned_cols=262  Identities=23%  Similarity=0.312  Sum_probs=220.9

Q ss_pred             CCCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc-----CchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeE
Q 004835          199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN-----ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDC  273 (728)
Q Consensus       199 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~-----~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~  273 (728)
                      .+++|++++.||+|+||.||+|+++.+|+.||||++...     ...+.+.+|+.+|+.++||| |+++++++......+
T Consensus        39 ~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~~~~~~~~~~~~~  117 (350)
T d1rdqe_          39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF-LVKLEFSFKDNSNLY  117 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTT-BCCEEEEEECSSEEE
T ss_pred             CccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCc-Eeecccccccccccc
Confidence            357999999999999999999999999999999998632     34466889999999999999 999999999999999


Q ss_pred             EEEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCC
Q 004835          274 FVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSF  350 (728)
Q Consensus       274 LV~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~  350 (728)
                      +||||+.++.+..+..   .+++..++.|+.||+.||.|||++|||||||||+||||+ .++.+||+|||+|+....   
T Consensus       118 ~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~-~~g~ikL~DFG~a~~~~~---  193 (350)
T d1rdqe_         118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKG---  193 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTSCEEECCCTTCEECSS---
T ss_pred             cccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccC-CCCCEEeeeceeeeeccc---
Confidence            9999999998866643   499999999999999999999999999999999999999 567899999999975210   


Q ss_pred             ccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccccccc
Q 004835          351 NQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEAT  430 (728)
Q Consensus       351 ~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~  430 (728)
                                                                                                      
T Consensus       194 --------------------------------------------------------------------------------  193 (350)
T d1rdqe_         194 --------------------------------------------------------------------------------  193 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCC
Q 004835          431 STRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMN  510 (728)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (728)
                                                                                                      
T Consensus       194 --------------------------------------------------------------------------------  193 (350)
T d1rdqe_         194 --------------------------------------------------------------------------------  193 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCC
Q 004835          511 KGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRT  590 (728)
Q Consensus       511 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~  590 (728)
                                                          .....+||+.|||||++.+.. |+.++||||||||+|||++|++
T Consensus       194 ------------------------------------~~~~~~Gt~~Y~APE~~~~~~-~~~~~DiwSlGvilyemltG~~  236 (350)
T d1rdqe_         194 ------------------------------------RTWTLCGTPEALAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP  236 (350)
T ss_dssp             ------------------------------------CBCCCEECGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ------------------------------------ccccccCccccCCHHHHcCCC-CCccccccchhHHHHHHHhCCC
Confidence                                                001346999999999996654 6999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcc
Q 004835          591 PFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT  670 (728)
Q Consensus       591 PF~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~  670 (728)
                      ||.+.+...+...+.                                          ...+.++..+++++.+||.+||.
T Consensus       237 Pf~~~~~~~~~~~i~------------------------------------------~~~~~~p~~~s~~~~~li~~~L~  274 (350)
T d1rdqe_         237 PFFADQPIQIYEKIV------------------------------------------SGKVRFPSHFSSDLKDLLRNLLQ  274 (350)
T ss_dssp             SSCCSSHHHHHHHHH------------------------------------------HCCCCCCTTCCHHHHHHHHHHSC
T ss_pred             CCCCcCHHHHHHHHh------------------------------------------cCCCCCCccCCHHHHHHHHHHhh
Confidence            999877654433221                                          11233445688999999999999


Q ss_pred             cCCCCCC-----CHHHHhcCCCCccchhcchHhHhhhcc
Q 004835          671 VNPRLRI-----SAEDALKHEFFAPCHEMLRKQKLLRQG  704 (728)
Q Consensus       671 ~dP~~Rp-----ta~e~L~Hp~f~~~~~~~~~~~~~~~~  704 (728)
                      .||.+|+     |++++|+||||+++.+....++.+.+.
T Consensus       275 ~dP~kR~~~~r~t~~ell~Hp~f~~~~~~~~~~~~~~~p  313 (350)
T d1rdqe_         275 VDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP  313 (350)
T ss_dssp             SCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCS
T ss_pred             hCHHhccccccccHHHHHcCccccCCCHHHHHhcCCCcC
Confidence            9999995     899999999999998766655554443


No 16 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-51  Score=431.09  Aligned_cols=141  Identities=21%  Similarity=0.293  Sum_probs=124.8

Q ss_pred             eeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC----chhHHHHHHHHHHhcCCCCceEEecceEEe----CCeeEE
Q 004835          203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA----SKHYVSNELRMLERFGGKNFIIKYEGCFKC----GDSDCF  274 (728)
Q Consensus       203 y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~----~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~----~~~~~L  274 (728)
                      |++.++||+|+||+||+|++..+++.||+|++....    ..+.+.+|+.+|++++||| |++++++|..    ...+|+
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~~~~~~~~~~~~~~~~~i   89 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN-IVRFYDSWESTVKGKKCIVL   89 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTT-BCCEEEEEEEESSSCEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCC-eeeEEEEEeeccccCCEEEE
Confidence            478889999999999999999999999999986432    2356889999999999999 9999999875    356899


Q ss_pred             EEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCC--cEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          275 VLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQG--IVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       275 V~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~g--IIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      ||||+++++|..+..   .+++..++.++.||+.||+|||+++  ||||||||+||||+.+++.+||+|||+|+.
T Consensus        90 vmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~  164 (270)
T d1t4ha_          90 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  164 (270)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence            999999999877653   3899999999999999999999998  999999999999975677899999999974


No 17 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=5.3e-51  Score=436.08  Aligned_cols=290  Identities=27%  Similarity=0.449  Sum_probs=230.1

Q ss_pred             CCCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCchhHHHHHHHHHHhcC-CCCceEEecceEEe--CCeeEEE
Q 004835          199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFG-GKNFIIKYEGCFKC--GDSDCFV  275 (728)
Q Consensus       199 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~Ei~iL~~L~-h~n~Ivkl~~~~~~--~~~~~LV  275 (728)
                      +.++|+++++||+|+||+||+|+++.+|+.||||+++.. ...++.+|+.+|+.+. |+| |++++++|..  ....|+|
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-~~~~~~~Ei~il~~l~~hpn-Iv~~~~~~~~~~~~~~~~v  110 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-KKKKIKREIKILENLRGGPN-IITLADIVKDPVSRTPALV  110 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-CHHHHHHHHHHHHHHTTSTT-BCCEEEEEECTTTCSEEEE
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-HHHHHHHHHHHHHhccCCCC-CcEEEEEEEecCCCceeEE
Confidence            346899999999999999999999999999999998754 3566889999999996 777 9999999974  4568999


Q ss_pred             EeccCCCChHHHhhcCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCCccccC
Q 004835          276 LEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQATL  355 (728)
Q Consensus       276 ~E~~~~~~l~~l~~~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~~~~~~  355 (728)
                      |||+.++++..+.+.+++..++.++.||+.||.|||++|||||||||+||||+.++..+||+|||+|......       
T Consensus       111 ~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~-------  183 (328)
T d3bqca1         111 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG-------  183 (328)
T ss_dssp             EECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT-------
T ss_pred             EeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCC-------
Confidence            9999999998888889999999999999999999999999999999999999966777999999999752110       


Q ss_pred             CCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCccccccccccCCc
Q 004835          356 PGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATSTRTP  435 (728)
Q Consensus       356 ~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~  435 (728)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (328)
T d3bqca1         184 --------------------------------------------------------------------------------  183 (328)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCCCCCC
Q 004835          436 AERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNKGPSD  515 (728)
Q Consensus       436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  515 (728)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (328)
T d3bqca1         184 --------------------------------------------------------------------------------  183 (328)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             chhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCCCCCC
Q 004835          516 LSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFFGD  595 (728)
Q Consensus       516 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~PF~~~  595 (728)
                                                    ......+||+.|+|||++.+...++.++||||+||++|+|++|+.||...
T Consensus       184 ------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~  233 (328)
T d3bqca1         184 ------------------------------QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG  233 (328)
T ss_dssp             ------------------------------CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             ------------------------------CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCC
Confidence                                          00113468999999999988777899999999999999999999999765


Q ss_pred             Ch--HHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcccCC
Q 004835          596 PE--QNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVNP  673 (728)
Q Consensus       596 ~~--~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~~dP  673 (728)
                      ..  .+...+...+|.+..+...........  ....  ..........|...  ........+++++.|||.+||++||
T Consensus       234 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~--~~~~~~~~~s~~~~dli~~mL~~dP  307 (328)
T d3bqca1         234 HDNYDQLVRIAKVLGTEDLYDYIDKYNIELD--PRFN--DILGRHSRKRWERF--VHSENQHLVSPEALDFLDKLLRYDH  307 (328)
T ss_dssp             SSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC--GGGG--GTCCCCCCCCGGGG--CCTTTGGGCCHHHHHHHHHHSCSSG
T ss_pred             chhHHHHHHHHHHHCCchhhhhhhhcccccC--cccc--hhcccccccchhhc--ccccccccCCHHHHHHHHHHccCCh
Confidence            43  567778888887665554433221111  0000  11111111122111  1223345688999999999999999


Q ss_pred             CCCCCHHHHhcCCCCccchh
Q 004835          674 RLRISAEDALKHEFFAPCHE  693 (728)
Q Consensus       674 ~~Rpta~e~L~Hp~f~~~~~  693 (728)
                      ++||||+|||+||||+++.+
T Consensus       308 ~~R~ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         308 QSRLTAREAMEHPYFYTVVK  327 (328)
T ss_dssp             GGSCCHHHHHTSGGGTTSCC
T ss_pred             hHCcCHHHHhcCcccCCCCC
Confidence            99999999999999999865


No 18 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.7e-52  Score=432.52  Aligned_cols=249  Identities=24%  Similarity=0.306  Sum_probs=198.7

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC----chhHHHHHHHHHHhcCCCCceEEecceEEe--CCeeE
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA----SKHYVSNELRMLERFGGKNFIIKYEGCFKC--GDSDC  273 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~----~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~--~~~~~  273 (728)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++....    ..+.+.+|+.++++++||| |+++++++.+  ++.+|
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~~~~~~~~~~~~~~~   81 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN-IVRYYDRIIDRTNTTLY   81 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTT-BCCEEEEEEC----CEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCC-EeeEEEEEEeCCCCEEE
Confidence            368999999999999999999999999999999987543    2345789999999999999 9999998854  46689


Q ss_pred             EEEeccCCCChHHHhh-------cCChHHHHHHHHHHHHHHHHHHhCC-----cEeccCCCCceEeecCCCceEEEeeec
Q 004835          274 FVLEHVKHDRPEVLKK-------EIDLSQLQWYGYCLFRALASLHKQG-----IVHRDVKPGNFLFSCKAVKGYLIDFNL  341 (728)
Q Consensus       274 LV~E~~~~~~l~~l~~-------~l~~~~~~~i~~QIl~aL~yLHs~g-----IIHRDIKPeNILld~~~~~~kL~DFGl  341 (728)
                      +||||+++++|..+..       .+++..++.++.||+.||.|||++|     ||||||||+||||+ .++.+||+|||+
T Consensus        82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~-~~~~vkl~DFG~  160 (269)
T d2java1          82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD-GKQNVKLGDFGL  160 (269)
T ss_dssp             EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC-TTSCEEECCHHH
T ss_pred             EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcC-CCCcEEEeeccc
Confidence            9999999998877653       3899999999999999999999976     99999999999999 667899999999


Q ss_pred             cccccCCCCccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCC
Q 004835          342 AMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGS  421 (728)
Q Consensus       342 A~~~~~~~~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~  421 (728)
                      |+......                                                                        
T Consensus       161 a~~~~~~~------------------------------------------------------------------------  168 (269)
T d2java1         161 ARILNHDT------------------------------------------------------------------------  168 (269)
T ss_dssp             HHHC----------------------------------------------------------------------------
T ss_pred             eeecccCC------------------------------------------------------------------------
Confidence            97521100                                                                        


Q ss_pred             CccccccccccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCc
Q 004835          422 GITSAKEATSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGI  501 (728)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (728)
                                                                                                      
T Consensus       169 --------------------------------------------------------------------------------  168 (269)
T d2java1         169 --------------------------------------------------------------------------------  168 (269)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHH
Q 004835          502 AVAGAGLMNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVT  581 (728)
Q Consensus       502 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~i  581 (728)
                                                                  ......+||+.|+|||++.+. .|+.++|||||||+
T Consensus       169 --------------------------------------------~~~~~~~gt~~Y~APE~l~~~-~~~~~~DIwSlGvi  203 (269)
T d2java1         169 --------------------------------------------SFAKAFVGTPYYMSPEQMNRM-SYNEKSDIWSLGCL  203 (269)
T ss_dssp             ---------------------------------------------------CCCSCCCHHHHTTC-CCCHHHHHHHHHHH
T ss_pred             --------------------------------------------CccccCCCCcccCCHHHHcCC-CCChHHHHHhhCHH
Confidence                                                        001134699999999999554 47999999999999


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhH
Q 004835          582 LLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSL  661 (728)
Q Consensus       582 l~eLltG~~PF~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  661 (728)
                      +|||++|++||.+.+...+...+.. |                                        ..+.++..+++++
T Consensus       204 lyel~tg~~Pf~~~~~~~~~~~i~~-~----------------------------------------~~~~~~~~~s~~l  242 (269)
T d2java1         204 LYELCALMPPFTAFSQKELAGKIRE-G----------------------------------------KFRRIPYRYSDEL  242 (269)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHH-T----------------------------------------CCCCCCTTSCHHH
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHc-C----------------------------------------CCCCCCcccCHHH
Confidence            9999999999998777655433310 0                                        0112334678999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhcCCCC
Q 004835          662 FDLVDKCLTVNPRLRISAEDALKHEFF  688 (728)
Q Consensus       662 ~dLi~~~L~~dP~~Rpta~e~L~Hp~f  688 (728)
                      .+||.+||..||.+|||++|+|+|||.
T Consensus       243 ~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         243 NEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            999999999999999999999999995


No 19 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.8e-51  Score=438.17  Aligned_cols=141  Identities=30%  Similarity=0.441  Sum_probs=128.3

Q ss_pred             CeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCc-----hhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEE
Q 004835          202 SFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS-----KHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVL  276 (728)
Q Consensus       202 ~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~-----~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~  276 (728)
                      .|++++.||+|+||+||+|++..+|+.||||++.....     .+.+.+|+.+|++++||| |+++++++.+++..|+||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN-TIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTT-BCCEEEEEEETTEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCC-EeeEEEEEEECCEEEEEE
Confidence            59999999999999999999999999999999875432     245789999999999999 999999999999999999


Q ss_pred             eccCCCChHHHh---hcCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          277 EHVKHDRPEVLK---KEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       277 E~~~~~~l~~l~---~~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      |||.++++..+.   ..+++..++.|+.||+.||.|||++|||||||||+||||+ +++.+||+|||+|..
T Consensus        95 E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~-~~~~~Kl~DFG~a~~  164 (309)
T d1u5ra_          95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASI  164 (309)
T ss_dssp             ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE-TTTEEEECCCTTCBS
T ss_pred             EecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEC-CCCCEEEeecccccc
Confidence            999999887654   2489999999999999999999999999999999999999 677899999999864


No 20 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=3.1e-51  Score=443.98  Aligned_cols=257  Identities=26%  Similarity=0.367  Sum_probs=212.8

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC--chhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEe
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA--SKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLE  277 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~--~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E  277 (728)
                      ++.|++++.||+|+||+||+|+++.+|+.||||++....  ....+.+|+.+|++++||| |++++++|.+++.+|||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~~~~~~~~~~~~~ivmE  106 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK-LINLHDAFEDKYEMVLILE  106 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTT-BCCEEEEEECSSEEEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCC-CCcEEEEEEECCEEEEEEE
Confidence            568999999999999999999999999999999987543  2456789999999999999 9999999999999999999


Q ss_pred             ccCCCChHHHhh----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeec-CCCceEEEeeeccccccCCCCcc
Q 004835          278 HVKHDRPEVLKK----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSC-KAVKGYLIDFNLAMVGFDGSFNQ  352 (728)
Q Consensus       278 ~~~~~~l~~l~~----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~-~~~~~kL~DFGlA~~~~~~~~~~  352 (728)
                      ||.++.|.....    .+++.+++.|+.||+.||.|||++|||||||||+||||+. ..+.+||+|||+|.......   
T Consensus       107 ~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~---  183 (352)
T d1koba_         107 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---  183 (352)
T ss_dssp             CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS---
T ss_pred             cCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCC---
Confidence            999998865432    3899999999999999999999999999999999999973 45789999999997521100   


Q ss_pred             ccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccccccccc
Q 004835          353 ATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATST  432 (728)
Q Consensus       353 ~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~  432 (728)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (352)
T d1koba_         184 --------------------------------------------------------------------------------  183 (352)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCCC
Q 004835          433 RTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNKG  512 (728)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (728)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (352)
T d1koba_         184 --------------------------------------------------------------------------------  183 (352)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCCC
Q 004835          513 PSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF  592 (728)
Q Consensus       513 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~PF  592 (728)
                                                        ......||+.|+|||++.+.. |+.++|||||||++|+|++|++||
T Consensus       184 ----------------------------------~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvilyelltG~~Pf  228 (352)
T d1koba_         184 ----------------------------------IVKVTTATAEFAAPEIVDREP-VGFYTDMWAIGVLGYVLLSGLSPF  228 (352)
T ss_dssp             ----------------------------------CEEEECSSGGGCCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred             ----------------------------------ceeeccCcccccCHHHHcCCC-CCCccchHHHHHHHHHHHhCCCCC
Confidence                                              011345899999999996554 699999999999999999999999


Q ss_pred             CCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcccC
Q 004835          593 FGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN  672 (728)
Q Consensus       593 ~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~~d  672 (728)
                      .+.+...+...+.. +             ...++                        ...+..+++++.+||.+||++|
T Consensus       229 ~~~~~~~~~~~i~~-~-------------~~~~~------------------------~~~~~~~s~~~~~li~~~L~~d  270 (352)
T d1koba_         229 AGEDDLETLQNVKR-C-------------DWEFD------------------------EDAFSSVSPEAKDFIKNLLQKE  270 (352)
T ss_dssp             CCSSHHHHHHHHHH-C-------------CCCCC------------------------SSTTTTSCHHHHHHHHTTSCSS
T ss_pred             CCCCHHHHHHHHHh-C-------------CCCCC------------------------cccccCCCHHHHHHHHHHccCC
Confidence            98777544332211 0             11111                        1223467899999999999999


Q ss_pred             CCCCCCHHHHhcCCCCccchh
Q 004835          673 PRLRISAEDALKHEFFAPCHE  693 (728)
Q Consensus       673 P~~Rpta~e~L~Hp~f~~~~~  693 (728)
                      |.+|||++|+|+||||+....
T Consensus       271 p~~R~s~~eil~Hp~~~~~~~  291 (352)
T d1koba_         271 PRKRLTVHDALEHPWLKGDHS  291 (352)
T ss_dssp             GGGSCCHHHHHTSTTTSSCCT
T ss_pred             hhHCcCHHHHhcCHhhCCCcc
Confidence            999999999999999986543


No 21 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.6e-51  Score=436.99  Aligned_cols=255  Identities=26%  Similarity=0.396  Sum_probs=215.0

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccC-----cCchhHHHHHHHHHH-hcCCCCceEEecceEEeCCeeE
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHA-----NASKHYVSNELRMLE-RFGGKNFIIKYEGCFKCGDSDC  273 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~-----~~~~~~~~~Ei~iL~-~L~h~n~Ivkl~~~~~~~~~~~  273 (728)
                      +++|++++.||+|+||+||+|+++.+|+.||||++++     ....+.+.+|..++. .++||| |+++++++.+++..|
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~-Iv~~~~~~~~~~~~y   79 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF-LTHMFCTFQTKENLF   79 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTT-BCCEEEEEECSSEEE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCc-EEEEEEEEccCCcee
Confidence            4789999999999999999999999999999999864     233455667777765 689999 999999999999999


Q ss_pred             EEEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCC
Q 004835          274 FVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSF  350 (728)
Q Consensus       274 LV~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~  350 (728)
                      +||||+.+|++..++.   .+++..++.++.||+.||.|||++||+||||||+|||++ +.+.+||+|||+|+...... 
T Consensus        80 ivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~-~~~~~kl~DFG~a~~~~~~~-  157 (320)
T d1xjda_          80 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD-KDGHIKIADFGMCKENMLGD-  157 (320)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-TTSCEEECCCTTCBCCCCTT-
T ss_pred             EEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeec-CCCceeccccchhhhccccc-
Confidence            9999999999887763   489999999999999999999999999999999999999 67789999999997421000 


Q ss_pred             ccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccccccc
Q 004835          351 NQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEAT  430 (728)
Q Consensus       351 ~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~  430 (728)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (320)
T d1xjda_         158 --------------------------------------------------------------------------------  157 (320)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCC
Q 004835          431 STRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMN  510 (728)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (728)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (320)
T d1xjda_         158 --------------------------------------------------------------------------------  157 (320)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCC
Q 004835          511 KGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRT  590 (728)
Q Consensus       511 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~  590 (728)
                                                         ...+..+||+.|+|||++.+.. |+.++|||||||++|+|++|+.
T Consensus       158 -----------------------------------~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvilyemltG~~  201 (320)
T d1xjda_         158 -----------------------------------AKTNTFCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQS  201 (320)
T ss_dssp             -----------------------------------CCBCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSC
T ss_pred             -----------------------------------ccccccCCCCCcCCHHHHcCCC-CCchhhhhhhhHHHHHHHhCCC
Confidence                                               0112346999999999996655 6999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcc
Q 004835          591 PFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT  670 (728)
Q Consensus       591 PF~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~  670 (728)
                      ||.+.+...+...+.                                          ...+.++..+++++.+||.+||.
T Consensus       202 PF~~~~~~~~~~~i~------------------------------------------~~~~~~p~~~s~~~~dli~~~L~  239 (320)
T d1xjda_         202 PFHGQDEEELFHSIR------------------------------------------MDNPFYPRWLEKEAKDLLVKLFV  239 (320)
T ss_dssp             SSCCSSHHHHHHHHH------------------------------------------HCCCCCCTTSCHHHHHHHHHHSC
T ss_pred             CCCCCCHHHHHHHHH------------------------------------------cCCCCCCccCCHHHHHHHHHhcc
Confidence            999988766544332                                          12234455688999999999999


Q ss_pred             cCCCCCCCHH-HHhcCCCCccchhcc
Q 004835          671 VNPRLRISAE-DALKHEFFAPCHEML  695 (728)
Q Consensus       671 ~dP~~Rpta~-e~L~Hp~f~~~~~~~  695 (728)
                      .||++|||+. ++++||||+++.+..
T Consensus       240 ~dP~~R~s~~~~l~~hpff~~~~~~~  265 (320)
T d1xjda_         240 REPEKRLGVRGDIRQHPLFREINWEE  265 (320)
T ss_dssp             SSGGGSBTTBSCGGGSGGGTTCCHHH
T ss_pred             cCCCCCcCHHHHHHhCchhccCCHHH
Confidence            9999999996 899999999987543


No 22 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-50  Score=436.98  Aligned_cols=279  Identities=27%  Similarity=0.464  Sum_probs=223.7

Q ss_pred             CeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCchhHHHHHHHHHHhcCCCCceEEecceEEeC------CeeEEE
Q 004835          202 SFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCG------DSDCFV  275 (728)
Q Consensus       202 ~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~------~~~~LV  275 (728)
                      +|..+++||+|+||+||+|++..+|+.||||++.....  ...+|+.+|++++|+| |++++++|...      .++|||
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~Ei~il~~l~h~n-iv~~~~~~~~~~~~~~~~~~~lv   97 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--FKNRELQIMRKLDHCN-IVRLRYFFYSSGEKKDEVYLNLV   97 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS--SCCHHHHHHHHCCCTT-BCCEEEEEEEC--CCSCCEEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch--HHHHHHHHHHhcCCCC-CCcEEEEEEecCccCCceEEEEE
Confidence            79999999999999999999999999999999875432  2347999999999999 99999988542      357999


Q ss_pred             EeccCCCChHHHhh------cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCC
Q 004835          276 LEHVKHDRPEVLKK------EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGS  349 (728)
Q Consensus       276 ~E~~~~~~l~~l~~------~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~  349 (728)
                      |||++++++..+..      .+++..++.++.||+.||+|||++||+||||||+||||+.++..+||+|||++...... 
T Consensus        98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~-  176 (350)
T d1q5ka_          98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-  176 (350)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTT-
T ss_pred             EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCC-
Confidence            99999886655432      38999999999999999999999999999999999999966678999999998752110 


Q ss_pred             CccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCccccccc
Q 004835          350 FNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEA  429 (728)
Q Consensus       350 ~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~  429 (728)
                                                                                                      
T Consensus       177 --------------------------------------------------------------------------------  176 (350)
T d1q5ka_         177 --------------------------------------------------------------------------------  176 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCC
Q 004835          430 TSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLM  509 (728)
Q Consensus       430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (728)
                                                                                                      
T Consensus       177 --------------------------------------------------------------------------------  176 (350)
T d1q5ka_         177 --------------------------------------------------------------------------------  176 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCC
Q 004835          510 NKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGR  589 (728)
Q Consensus       510 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~  589 (728)
                                                          ......+||+.|+|||++.+...|+.++||||+||++|||++|+
T Consensus       177 ------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~  220 (350)
T d1q5ka_         177 ------------------------------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ  220 (350)
T ss_dssp             ------------------------------------SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTS
T ss_pred             ------------------------------------cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCC
Confidence                                                00113468999999999988777899999999999999999999


Q ss_pred             CCCCCCCh-HHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHh
Q 004835          590 TPFFGDPE-QNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC  668 (728)
Q Consensus       590 ~PF~~~~~-~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~  668 (728)
                      +||.+.+. +.+..+++.+|++....+.........        ...+......|.+.      ....+++++.|||.+|
T Consensus       221 ~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~------~~~~~s~~~~dLl~~m  286 (350)
T d1q5ka_         221 PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE--------FKFPQIKAHPWTKV------FRPRTPPEAIALCSRL  286 (350)
T ss_dssp             CSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---C--------CCCCCCCCCCGGGT------SCTTSCHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhh--------ccccccccCchhhh------cccCCCHHHHHHHHHH
Confidence            99988766 678889999998765555443322111        11222222223221      2245788999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCccchhc
Q 004835          669 LTVNPRLRISAEDALKHEFFAPCHEM  694 (728)
Q Consensus       669 L~~dP~~Rpta~e~L~Hp~f~~~~~~  694 (728)
                      |.+||++||||.|+|+||||+++.+.
T Consensus       287 L~~dP~~R~ta~e~L~Hp~f~~~~~~  312 (350)
T d1q5ka_         287 LEYTPTARLTPLEACAHSFFDELRDP  312 (350)
T ss_dssp             SCSSGGGSCCHHHHHTSGGGGGGGCT
T ss_pred             ccCChhHCcCHHHHhcCHhhccccCC
Confidence            99999999999999999999988764


No 23 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-50  Score=427.30  Aligned_cols=276  Identities=27%  Similarity=0.397  Sum_probs=213.8

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCC-CeEEEEEeccCc----CchhHHHHHHHHHHhc---CCCCceEEecceEEe----
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKND-GTVVAIKCPHAN----ASKHYVSNELRMLERF---GGKNFIIKYEGCFKC----  268 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~-g~~VAIK~i~~~----~~~~~~~~Ei~iL~~L---~h~n~Ivkl~~~~~~----  268 (728)
                      ++|++++.||+|+||+||+|++..+ ++.||||+++..    .....+.+|+.+|+.|   +||| |++++++|..    
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~Hpn-Iv~~~~~~~~~~~~   85 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN-VVRLFDVCTVSRTD   85 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTT-BCCEEEEEEEEECS
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCC-cceeeeeecccccc
Confidence            5899999999999999999999655 678999998642    2234566888887766   6898 9999998853    


Q ss_pred             -CCeeEEEEeccCCCChHHHh----hcCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccc
Q 004835          269 -GDSDCFVLEHVKHDRPEVLK----KEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAM  343 (728)
Q Consensus       269 -~~~~~LV~E~~~~~~l~~l~----~~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~  343 (728)
                       ....|++|||+.++.+....    ..+++..++.++.||+.||+|||++|||||||||+|||++ +.+.+||+|||++.
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~-~~~~~kl~dfg~~~  164 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLAR  164 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTCCEEECSCCSCC
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEc-CCCCeeecchhhhh
Confidence             34789999999998776543    2388999999999999999999999999999999999999 66789999999986


Q ss_pred             cccCCCCccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCc
Q 004835          344 VGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGI  423 (728)
Q Consensus       344 ~~~~~~~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~  423 (728)
                      .....                                                                           
T Consensus       165 ~~~~~---------------------------------------------------------------------------  169 (305)
T d1blxa_         165 IYSFQ---------------------------------------------------------------------------  169 (305)
T ss_dssp             CCCGG---------------------------------------------------------------------------
T ss_pred             hhccc---------------------------------------------------------------------------
Confidence            41100                                                                           


Q ss_pred             cccccccccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCccc
Q 004835          424 TSAKEATSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAV  503 (728)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (728)
                                                                                                      
T Consensus       170 --------------------------------------------------------------------------------  169 (305)
T d1blxa_         170 --------------------------------------------------------------------------------  169 (305)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCCCCCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHH
Q 004835          504 AGAGLMNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLL  583 (728)
Q Consensus       504 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~  583 (728)
                                                                ......+||+.|+|||++.+.. |+.++||||+||++|
T Consensus       170 ------------------------------------------~~~~~~~gT~~Y~APE~~~~~~-y~~~~DiwSlG~il~  206 (305)
T d1blxa_         170 ------------------------------------------MALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFA  206 (305)
T ss_dssp             ------------------------------------------GGGCCCCCCCTTCCHHHHTTCC-CCTHHHHHHHHHHHH
T ss_pred             ------------------------------------------ccCCCcccChhhcCcchhcCCC-CChhehhhchHHHHH
Confidence                                                      0011346999999999996655 699999999999999


Q ss_pred             HHhcCCCCCCCCCh-HHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHH
Q 004835          584 YLMIGRTPFFGDPE-QNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF  662 (728)
Q Consensus       584 eLltG~~PF~~~~~-~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  662 (728)
                      ||++|++||.+.+. +.+..+++..|.+.......    ....+....  .....          .....+...+++.+.
T Consensus       207 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~----------~~~~~~~~~~s~~~~  270 (305)
T d1blxa_         207 EMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR----DVALPRQAF--HSKSA----------QPIEKFVTDIDELGK  270 (305)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT----TCSSCGGGS--CCCCC----------CCGGGTCCSCCHHHH
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccc----cccchhhhh--ccccc----------cchhhccccCCHHHH
Confidence            99999999998776 56788888888643221100    000111000  00000          011234567889999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCCCCccch
Q 004835          663 DLVDKCLTVNPRLRISAEDALKHEFFAPCH  692 (728)
Q Consensus       663 dLi~~~L~~dP~~Rpta~e~L~Hp~f~~~~  692 (728)
                      |||.+||.+||++||||+|+|+||||+++.
T Consensus       271 dli~~mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         271 DLLLKCLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence            999999999999999999999999999875


No 24 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=1.4e-50  Score=424.56  Aligned_cols=278  Identities=26%  Similarity=0.378  Sum_probs=220.6

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC----chhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEE
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA----SKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFV  275 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~----~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV  275 (728)
                      +++|+++++||+|+||+||+|+++ +|+.||||+++...    ....+.+|+.+|++++|+| |++++++|...+..|++
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~~~~~~~~~~~~~i~   78 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN-IVKLYDVIHTKKRLVLV   78 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTT-BCCEEEEEECSSCEEEE
T ss_pred             CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCc-EEeeeeecccCCceeEE
Confidence            479999999999999999999996 78999999986532    3467889999999999999 99999999999999999


Q ss_pred             EeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCCcc
Q 004835          276 LEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQ  352 (728)
Q Consensus       276 ~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~~~  352 (728)
                      |||+.++++..+..   .+++..++.|+.||+.||+|||++|||||||||+||||+ .++.+||+|||+|.......   
T Consensus        79 ~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~-~~~~~kl~DfG~a~~~~~~~---  154 (286)
T d1ob3a_          79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPV---  154 (286)
T ss_dssp             EECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTSCEEECCTTHHHHHCC-----
T ss_pred             EEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEc-CCCCEEecccccceecccCc---
Confidence            99999998877754   389999999999999999999999999999999999999 66789999999997521100   


Q ss_pred             ccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccccccccc
Q 004835          353 ATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATST  432 (728)
Q Consensus       353 ~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~  432 (728)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (286)
T d1ob3a_         155 --------------------------------------------------------------------------------  154 (286)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCCC
Q 004835          433 RTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNKG  512 (728)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (728)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (286)
T d1ob3a_         155 --------------------------------------------------------------------------------  154 (286)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCCC
Q 004835          513 PSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF  592 (728)
Q Consensus       513 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~PF  592 (728)
                                                       ......+||+.|+|||++.+...++.++|||||||++|||++|++||
T Consensus       155 ---------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf  201 (286)
T d1ob3a_         155 ---------------------------------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF  201 (286)
T ss_dssp             ----------------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ---------------------------------cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCC
Confidence                                             00113358999999999988777899999999999999999999999


Q ss_pred             CCCCh-HHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhccc
Q 004835          593 FGDPE-QNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTV  671 (728)
Q Consensus       593 ~~~~~-~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~~  671 (728)
                      .+.+. +++..++..+|.+..........    .+...   ..........       ...+...+++.+.|||.+||.+
T Consensus       202 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~-------~~~~~~~~s~~~~dli~~~L~~  267 (286)
T d1ob3a_         202 PGVSEADQLMRIFRILGTPNSKNWPNVTE----LPKYD---PNFTVYEPLP-------WESFLKGLDESGIDLLSKMLKL  267 (286)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCTTTSTTGGG----STTCC---TTCCCCCCCC-------GGGTCCSCCHHHHHHHHHHTCS
T ss_pred             CCCCHHHHHHHHHHhhCCCChhhccchhh----hhhcc---cccccccCcc-------hhhhcccCCHHHHHHHHHHccC
Confidence            88765 56788888888643221111000    00000   0000011111       1234567889999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCcc
Q 004835          672 NPRLRISAEDALKHEFFAP  690 (728)
Q Consensus       672 dP~~Rpta~e~L~Hp~f~~  690 (728)
                      ||++||||+|+|+||||++
T Consensus       268 dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         268 DPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             STTTSCCHHHHHTSGGGGC
T ss_pred             ChhHCcCHHHHhcCcccCc
Confidence            9999999999999999985


No 25 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.6e-51  Score=424.40  Aligned_cols=245  Identities=24%  Similarity=0.350  Sum_probs=204.9

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC--------chhHHHHHHHHHHhcC--CCCceEEecceEEeCC
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA--------SKHYVSNELRMLERFG--GKNFIIKYEGCFKCGD  270 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~--------~~~~~~~Ei~iL~~L~--h~n~Ivkl~~~~~~~~  270 (728)
                      ++|++.+.||+|+||+||+|++..+|+.||||++....        ...++.+|+.++++++  |+| |++++++|...+
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~n-Iv~~~~~~~~~~   82 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG-VIRLLDWFERPD   82 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCS-BCCEEEEEECSS
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCC-ccEEEEEEeeCC
Confidence            58999999999999999999999999999999986431        1234668999999997  777 999999999999


Q ss_pred             eeEEEEeccCC-CChHHHh---hcCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccccc
Q 004835          271 SDCFVLEHVKH-DRPEVLK---KEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGF  346 (728)
Q Consensus       271 ~~~LV~E~~~~-~~l~~l~---~~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~  346 (728)
                      ..|+||||+.+ +++..+.   ..+++..++.++.||+.||.|||++|||||||||+|||++.+++.+||+|||+|+...
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~  162 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK  162 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             eEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecc
Confidence            99999999976 4554443   2489999999999999999999999999999999999999666789999999997411


Q ss_pred             CCCCccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccc
Q 004835          347 DGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSA  426 (728)
Q Consensus       347 ~~~~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~  426 (728)
                      ..                                                                              
T Consensus       163 ~~------------------------------------------------------------------------------  164 (273)
T d1xwsa_         163 DT------------------------------------------------------------------------------  164 (273)
T ss_dssp             SS------------------------------------------------------------------------------
T ss_pred             cc------------------------------------------------------------------------------
Confidence            00                                                                              


Q ss_pred             ccccccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccC
Q 004835          427 KEATSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGA  506 (728)
Q Consensus       427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (728)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (273)
T d1xwsa_         165 --------------------------------------------------------------------------------  164 (273)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHh
Q 004835          507 GLMNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLM  586 (728)
Q Consensus       507 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLl  586 (728)
                                                              ..+..+||+.|+|||++.+...++.++|||||||++|||+
T Consensus       165 ----------------------------------------~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell  204 (273)
T d1xwsa_         165 ----------------------------------------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV  204 (273)
T ss_dssp             ----------------------------------------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHH
T ss_pred             ----------------------------------------cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHh
Confidence                                                    0113469999999999977776688899999999999999


Q ss_pred             cCCCCCCCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHH
Q 004835          587 IGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVD  666 (728)
Q Consensus       587 tG~~PF~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~  666 (728)
                      +|+.||.+..  .   +++                                           ....++..+|+++.+||.
T Consensus       205 ~g~~Pf~~~~--~---i~~-------------------------------------------~~~~~~~~~s~~~~~li~  236 (273)
T d1xwsa_         205 CGDIPFEHDE--E---IIR-------------------------------------------GQVFFRQRVSSECQHLIR  236 (273)
T ss_dssp             HSSCSCCSHH--H---HHH-------------------------------------------CCCCCSSCCCHHHHHHHH
T ss_pred             hCCCCCCCch--H---Hhh-------------------------------------------cccCCCCCCCHHHHHHHH
Confidence            9999997531  1   110                                           112234567899999999


Q ss_pred             HhcccCCCCCCCHHHHhcCCCCccch
Q 004835          667 KCLTVNPRLRISAEDALKHEFFAPCH  692 (728)
Q Consensus       667 ~~L~~dP~~Rpta~e~L~Hp~f~~~~  692 (728)
                      +||..||++|||++|+|+||||+++.
T Consensus       237 ~~L~~dp~~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         237 WCLALRPSDRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             HHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             HHccCCHhHCcCHHHHhcCHhhCCCC
Confidence            99999999999999999999999864


No 26 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=6.8e-50  Score=419.55  Aligned_cols=255  Identities=25%  Similarity=0.384  Sum_probs=211.2

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCc-----------hhHHHHHHHHHHhcC-CCCceEEecceEE
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS-----------KHYVSNELRMLERFG-GKNFIIKYEGCFK  267 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~-----------~~~~~~Ei~iL~~L~-h~n~Ivkl~~~~~  267 (728)
                      .++|++.+.||+|+||+||+|++..+|+.||||++.....           .+.+.+|+.+++++. |+| |+++++++.
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpn-Iv~~~~~~~   80 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPN-IIQLKDTYE   80 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTT-BCCEEEEEE
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCC-eEEEEeecc
Confidence            4689999999999999999999999999999999865321           235789999999997 888 999999999


Q ss_pred             eCCeeEEEEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          268 CGDSDCFVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       268 ~~~~~~LV~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      +++..||||||+++++|..+++   .+++..++.++.||+.||+|||++||+||||||+||||+ .++.+||+|||+++.
T Consensus        81 ~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~-~~~~~kl~DFG~a~~  159 (277)
T d1phka_          81 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-DDMNIKLTDFGFSCQ  159 (277)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTCCEEECCCTTCEE
T ss_pred             cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEc-CCCCeEEccchheeE
Confidence            9999999999999988877653   389999999999999999999999999999999999999 677899999999975


Q ss_pred             ccCCCCccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcc
Q 004835          345 GFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGIT  424 (728)
Q Consensus       345 ~~~~~~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~  424 (728)
                      ....                                                                            
T Consensus       160 ~~~~----------------------------------------------------------------------------  163 (277)
T d1phka_         160 LDPG----------------------------------------------------------------------------  163 (277)
T ss_dssp             CCTT----------------------------------------------------------------------------
T ss_pred             ccCC----------------------------------------------------------------------------
Confidence            2110                                                                            


Q ss_pred             ccccccccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccc
Q 004835          425 SAKEATSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVA  504 (728)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (728)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (277)
T d1phka_         164 --------------------------------------------------------------------------------  163 (277)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhc-----cCCCCCchhHHHHH
Q 004835          505 GAGLMNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFR-----SQHQGPKLDIWSAG  579 (728)
Q Consensus       505 ~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~-----~~~~~~~~DIWSlG  579 (728)
                                                               ......+||+.|+|||++.+     ...++.++||||+|
T Consensus       164 -----------------------------------------~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslG  202 (277)
T d1phka_         164 -----------------------------------------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG  202 (277)
T ss_dssp             -----------------------------------------CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHH
T ss_pred             -----------------------------------------CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccc
Confidence                                                     00113469999999999853     23468899999999


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCch
Q 004835          580 VTLLYLMIGRTPFFGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPS  659 (728)
Q Consensus       580 ~il~eLltG~~PF~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  659 (728)
                      |++|+|++|+.||.+.+...+...+. .|             ...+                        .......+|+
T Consensus       203 vilyeml~g~~Pf~~~~~~~~~~~i~-~~-------------~~~~------------------------~~~~~~~~s~  244 (277)
T d1phka_         203 VIMYTLLAGSPPFWHRKQMLMLRMIM-SG-------------NYQF------------------------GSPEWDDYSD  244 (277)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHH-HT-------------CCCC------------------------CTTTGGGSCH
T ss_pred             hhhhhhccCCCCCCCCCHHHHHHHHH-hC-------------CCCC------------------------CCcccccCCH
Confidence            99999999999999887755443221 01             0000                        1112246889


Q ss_pred             hHHHHHHHhcccCCCCCCCHHHHhcCCCCccc
Q 004835          660 SLFDLVDKCLTVNPRLRISAEDALKHEFFAPC  691 (728)
Q Consensus       660 ~l~dLi~~~L~~dP~~Rpta~e~L~Hp~f~~~  691 (728)
                      ++.+||.+||..||++|||++|+|+||||+..
T Consensus       245 ~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         245 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence            99999999999999999999999999999863


No 27 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4e-50  Score=429.76  Aligned_cols=254  Identities=23%  Similarity=0.366  Sum_probs=211.5

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCc-hhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEec
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS-KHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH  278 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~-~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E~  278 (728)
                      +++|++.+.||+|+||+||+|+++.+|+.||||+++.... ...+.+|+.+|..++|+| |++++++|.+.+.+|+||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRN-ILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTT-BCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCC-CCeEEEEEEECCEEEEEEec
Confidence            5789999999999999999999999999999999986543 345789999999999999 99999999999999999999


Q ss_pred             cCCCChHHHhh----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecC-CCceEEEeeeccccccCCCCccc
Q 004835          279 VKHDRPEVLKK----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCK-AVKGYLIDFNLAMVGFDGSFNQA  353 (728)
Q Consensus       279 ~~~~~l~~l~~----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~-~~~~kL~DFGlA~~~~~~~~~~~  353 (728)
                      |.++.|..++.    .+++.+++.|+.||+.||.|||++||+||||||+|||++.+ ...+||+|||+++......    
T Consensus        83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~----  158 (321)
T d1tkia_          83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----  158 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCC----
Confidence            99988876653    38999999999999999999999999999999999999843 4578999999987521100    


Q ss_pred             cCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCccccccccccC
Q 004835          354 TLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATSTR  433 (728)
Q Consensus       354 ~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  433 (728)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (321)
T d1tkia_         159 --------------------------------------------------------------------------------  158 (321)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCCCC
Q 004835          434 TPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNKGP  513 (728)
Q Consensus       434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (728)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (321)
T d1tkia_         159 --------------------------------------------------------------------------------  158 (321)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCCCC
Q 004835          514 SDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPFF  593 (728)
Q Consensus       514 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~PF~  593 (728)
                                                       ......||+.|+|||++.+.. |+.++|||||||++|+|++|.+||.
T Consensus       159 ---------------------------------~~~~~~~t~~y~ape~~~~~~-~~~~~DiWSlGvily~ll~G~~Pf~  204 (321)
T d1tkia_         159 ---------------------------------NFRLLFTAPEYYAPEVHQHDV-VSTATDMWSLGTLVYVLLSGINPFL  204 (321)
T ss_dssp             ---------------------------------EEEEEESCGGGSCHHHHTTCE-ECHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             ---------------------------------cccccccccccccchhccCCC-CCchhhcccHHHHHHHHHhCCCCCC
Confidence                                             001235899999999985554 6999999999999999999999999


Q ss_pred             CCChHHHHH-HHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcccC
Q 004835          594 GDPEQNIKD-IAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLTVN  672 (728)
Q Consensus       594 ~~~~~~l~~-i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~~d  672 (728)
                      +.+...+.. |+.               ....|+.                        ..+..+++++.+||.+||..|
T Consensus       205 ~~~~~~~~~~i~~---------------~~~~~~~------------------------~~~~~~s~~~~~li~~~L~~d  245 (321)
T d1tkia_         205 AETNQQIIENIMN---------------AEYTFDE------------------------EAFKEISIEAMDFVDRLLVKE  245 (321)
T ss_dssp             CSSHHHHHHHHHH---------------TCCCCCH------------------------HHHTTSCHHHHHHHHTTSCSS
T ss_pred             CCCHHHHHHHHHh---------------CCCCCCh------------------------hhccCCCHHHHHHHHHHccCC
Confidence            887755433 221               1111111                        122457899999999999999


Q ss_pred             CCCCCCHHHHhcCCCCccc
Q 004835          673 PRLRISAEDALKHEFFAPC  691 (728)
Q Consensus       673 P~~Rpta~e~L~Hp~f~~~  691 (728)
                      |.+|||++|+|+||||++-
T Consensus       246 p~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         246 RKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             GGGSCCHHHHHHSHHHHSC
T ss_pred             hhHCcCHHHHhcCHhhccC
Confidence            9999999999999999753


No 28 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-49  Score=426.19  Aligned_cols=281  Identities=27%  Similarity=0.427  Sum_probs=214.2

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCc----hhHHHHHHHHHHhcCCCCceEEecceEEeCC------
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS----KHYVSNELRMLERFGGKNFIIKYEGCFKCGD------  270 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~----~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~------  270 (728)
                      ++|++++.||+|+||+||+|+++.+|+.||||+++....    .+.+.+|+.+|+.++|+| |++++++|...+      
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpn-iv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHEN-VIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTT-BCCCSEEECSCSSTTTCC
T ss_pred             CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCC-eeEEEEEeccCccccccc
Confidence            689999999999999999999999999999999875422    346789999999999999 999999997654      


Q ss_pred             eeEEEEeccCCCChHHHhh--cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCC
Q 004835          271 SDCFVLEHVKHDRPEVLKK--EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDG  348 (728)
Q Consensus       271 ~~~LV~E~~~~~~l~~l~~--~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~  348 (728)
                      .+|+||||++.. +..+.+  .+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||+|||+|+.... 
T Consensus        97 ~~~lv~e~~~~~-l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~-~~~~~kl~Dfg~a~~~~~-  173 (346)
T d1cm8a_          97 DFYLVMPFMGTD-LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN-EDCELKILDFGLARQADS-  173 (346)
T ss_dssp             CCEEEEECCSEE-HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-TTCCEEECCCTTCEECCS-
T ss_pred             eEEEEEeccccc-HHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcc-cccccccccccceeccCC-
Confidence            579999999544 444433  499999999999999999999999999999999999999 677899999999974110 


Q ss_pred             CCccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccccc
Q 004835          349 SFNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKE  428 (728)
Q Consensus       349 ~~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~  428 (728)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (346)
T d1cm8a_         174 --------------------------------------------------------------------------------  173 (346)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCC
Q 004835          429 ATSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGL  508 (728)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (728)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (346)
T d1cm8a_         174 --------------------------------------------------------------------------------  173 (346)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcC
Q 004835          509 MNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIG  588 (728)
Q Consensus       509 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG  588 (728)
                                                            ..+..+||+.|+|||++.+...++.++||||+||++|+|++|
T Consensus       174 --------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g  215 (346)
T d1cm8a_         174 --------------------------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG  215 (346)
T ss_dssp             --------------------------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHS
T ss_pred             --------------------------------------ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHC
Confidence                                                  011346899999999998877789999999999999999999


Q ss_pred             CCCCCCCCh-HHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHH
Q 004835          589 RTPFFGDPE-QNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDK  667 (728)
Q Consensus       589 ~~PF~~~~~-~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~  667 (728)
                      ++||.+.+. +.+..+....|.+..........     ..........+......|.       .....+++.+.|||.+
T Consensus       216 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-------~~~~~~s~~~~dli~~  283 (346)
T d1cm8a_         216 KTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS-----DEAKNYMKGLPELEKKDFA-------SILTNASPLAVNLLEK  283 (346)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC-----HHHHHHHHHSCCCCCCCGG-------GTCTTCCHHHHHHHHH
T ss_pred             cCCCCCCChHHHHHHHHhccCCCcHHHHhhhcc-----hhhhhhhccCCcccccchH-------HhccCCCHHHHHHHHH
Confidence            999998776 56777788888755433221110     0000000111111111121       2234678899999999


Q ss_pred             hcccCCCCCCCHHHHhcCCCCccchhcc
Q 004835          668 CLTVNPRLRISAEDALKHEFFAPCHEML  695 (728)
Q Consensus       668 ~L~~dP~~Rpta~e~L~Hp~f~~~~~~~  695 (728)
                      ||.+||.+||||+|+|+||||++++...
T Consensus       284 mL~~dP~~R~ta~eiL~Hp~f~~~~~~~  311 (346)
T d1cm8a_         284 MLVLDAEQRVTAGEALAHPYFESLHDTE  311 (346)
T ss_dssp             HSCSSTTTSCCHHHHHHSGGGTTTC---
T ss_pred             HCcCChhHCcCHHHHhcChhhCcCCCcc
Confidence            9999999999999999999999987544


No 29 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8e-49  Score=417.06  Aligned_cols=287  Identities=25%  Similarity=0.352  Sum_probs=212.7

Q ss_pred             CCCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc----CchhHHHHHHHHHHhcCCCCceEEecceEEe------
Q 004835          199 NFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN----ASKHYVSNELRMLERFGGKNFIIKYEGCFKC------  268 (728)
Q Consensus       199 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~----~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~------  268 (728)
                      .+++|+++++||+|+||+||+|++..+|+.||||++...    .....+.+|+.+|++++|+| |+++++.+..      
T Consensus         8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~n-ii~~~~~~~~~~~~~~   86 (318)
T d3blha1           8 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN-VVNLIEICRTKASPYN   86 (318)
T ss_dssp             BGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTT-BCCEEEEEEC------
T ss_pred             ccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCC-ccceEeeeeccccccc
Confidence            468999999999999999999999999999999998643    23456889999999999999 8888888754      


Q ss_pred             --CCeeEEEEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccc
Q 004835          269 --GDSDCFVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAM  343 (728)
Q Consensus       269 --~~~~~LV~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~  343 (728)
                        ....|+||||+.++++..+..   .+++..++.++.||+.||.|||++||+||||||+||||+ .++.+||+|||++.
T Consensus        87 ~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~-~~~~~kl~dfg~~~  165 (318)
T d3blha1          87 RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-RDGVLKLADFGLAR  165 (318)
T ss_dssp             ----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-TTSCEEECCCTTCE
T ss_pred             ccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeec-CCCcEEeeecceee
Confidence              356899999999988776643   488999999999999999999999999999999999999 66789999999997


Q ss_pred             cccCCCCccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCc
Q 004835          344 VGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGI  423 (728)
Q Consensus       344 ~~~~~~~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~  423 (728)
                      ........                                                                        
T Consensus       166 ~~~~~~~~------------------------------------------------------------------------  173 (318)
T d3blha1         166 AFSLAKNS------------------------------------------------------------------------  173 (318)
T ss_dssp             ECCC----------------------------------------------------------------------------
T ss_pred             eccccccc------------------------------------------------------------------------
Confidence            52111000                                                                        


Q ss_pred             cccccccccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCccc
Q 004835          424 TSAKEATSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAV  503 (728)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (728)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (318)
T d3blha1         174 --------------------------------------------------------------------------------  173 (318)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCCCCCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHH
Q 004835          504 AGAGLMNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLL  583 (728)
Q Consensus       504 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~  583 (728)
                                                              ........+||+.|+|||++.+...|+.++||||+||++|
T Consensus       174 ----------------------------------------~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~  213 (318)
T d3blha1         174 ----------------------------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA  213 (318)
T ss_dssp             -----------------------------------------CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             ----------------------------------------ccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceee
Confidence                                                    0001113469999999999987777899999999999999


Q ss_pred             HHhcCCCCCCCCCh-HHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHH
Q 004835          584 YLMIGRTPFFGDPE-QNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLF  662 (728)
Q Consensus       584 eLltG~~PF~~~~~-~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  662 (728)
                      ||++|++||.+.++ ..+..+.+..|+...............  ...   .............+      -....++.++
T Consensus       214 el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~------~~~~~~~~~~  282 (318)
T d3blha1         214 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY--EKL---ELVKGQKRKVKDRL------KAYVRDPYAL  282 (318)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC------------CCSSCCBCHHHHH------HHHHCCHHHH
T ss_pred             eHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhh--hhh---cccccccccchhhh------ccccCCHHHH
Confidence            99999999998776 456667777775331100000000000  000   00000000000000      0113467889


Q ss_pred             HHHHHhcccCCCCCCCHHHHhcCCCCcc
Q 004835          663 DLVDKCLTVNPRLRISAEDALKHEFFAP  690 (728)
Q Consensus       663 dLi~~~L~~dP~~Rpta~e~L~Hp~f~~  690 (728)
                      |||.+||.+||++||||+|+|+||||+.
T Consensus       283 dLl~~mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         283 DLIDKLLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             HHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence            9999999999999999999999999985


No 30 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.9e-49  Score=410.74  Aligned_cols=282  Identities=25%  Similarity=0.383  Sum_probs=220.2

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC----chhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEE
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA----SKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFV  275 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~----~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV  275 (728)
                      +++|+++++||+|+||+||+|++..+|+.||||+++...    ...++.+|+.+|+.++|+| |+++++++......++|
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~n-iv~~~~~~~~~~~~~iv   79 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN-IVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTT-BCCEEEEEECSSEEEEE
T ss_pred             CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCC-EEeeccccccccceeEE
Confidence            468999999999999999999999999999999986432    2456889999999999999 99999999999999999


Q ss_pred             EeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCCcc
Q 004835          276 LEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSFNQ  352 (728)
Q Consensus       276 ~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~~~  352 (728)
                      ++++.++.+..+..   .+++..++.++.|++.||+|||++|||||||||+||||+ .++.+||+|||.|+......   
T Consensus        80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~-~~~~~kl~DFG~a~~~~~~~---  155 (292)
T d1unla_          80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN-RNGELKLANFGLARAFGIPV---  155 (292)
T ss_dssp             EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-TTCCEEECCCTTCEECCSCC---
T ss_pred             eeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccc-cCCceeeeecchhhcccCCC---
Confidence            99999988877653   488999999999999999999999999999999999999 56689999999997521100   


Q ss_pred             ccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccccccccc
Q 004835          353 ATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEATST  432 (728)
Q Consensus       353 ~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~  432 (728)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (292)
T d1unla_         156 --------------------------------------------------------------------------------  155 (292)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCCCC
Q 004835          433 RTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMNKG  512 (728)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (728)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (292)
T d1unla_         156 --------------------------------------------------------------------------------  155 (292)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCCCC
Q 004835          513 PSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRTPF  592 (728)
Q Consensus       513 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~PF  592 (728)
                                                       .......+++.|+|||++.+...++.++||||+||++|||++|+.||
T Consensus       156 ---------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  202 (292)
T d1unla_         156 ---------------------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL  202 (292)
T ss_dssp             ---------------------------------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCS
T ss_pred             ---------------------------------ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCC
Confidence                                             00112346888999999977776799999999999999999999987


Q ss_pred             CC-CCh-HHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhcc
Q 004835          593 FG-DPE-QNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCLT  670 (728)
Q Consensus       593 ~~-~~~-~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L~  670 (728)
                      +. .+. +.+..+....|.+..........        .......+      ..............+++.+.|||.+||.
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~------~~~~~~~~~~~~~~~s~~~~dll~~mL~  268 (292)
T d1unla_         203 FPGNDVDDQLKRIFRLLGTPTEEQWPSMTK--------LPDYKPYP------MYPATTSLVNVVPKLNATGRDLLQNLLK  268 (292)
T ss_dssp             CCCSSHHHHHHHHHHHHCCCCTTTCTTGGG--------STTCCCCC------CCCTTCCCTTTSTTCCHHHHHHHHHHSC
T ss_pred             CCCCCHHHHHHHHHhhcCCCChhhhhhhhh--------cccccccc------cccccchhhhccccCCHHHHHHHHHHcc
Confidence            54 333 45666666666533211110000        00000000      0011112233446678899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCccchh
Q 004835          671 VNPRLRISAEDALKHEFFAPCHE  693 (728)
Q Consensus       671 ~dP~~Rpta~e~L~Hp~f~~~~~  693 (728)
                      +||.+||||+|+|+||||+++..
T Consensus       269 ~dP~~R~sa~e~L~Hp~f~~~~~  291 (292)
T d1unla_         269 CNPVQRISAEEALQHPYFSDFCP  291 (292)
T ss_dssp             SSGGGSCCHHHHTTSGGGSSCSC
T ss_pred             CChhHCcCHHHHhcChhhcCCCC
Confidence            99999999999999999998653


No 31 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-49  Score=427.05  Aligned_cols=141  Identities=21%  Similarity=0.209  Sum_probs=122.6

Q ss_pred             CCCeeEEE-EecccCceEEEEEEEcCCCeEEEEEeccCcCchhHHHHHHHHHHhc-CCCCceEEecceEEe----CCeeE
Q 004835          200 FESFIVEE-EEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERF-GGKNFIIKYEGCFKC----GDSDC  273 (728)
Q Consensus       200 ~~~y~i~~-~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~Ei~iL~~L-~h~n~Ivkl~~~~~~----~~~~~  273 (728)
                      +++|.+.. .||+|+||+||+|++..+|+.||||+++.   ...+.+|+.++.++ +|+| |++++++|.+    ...+|
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~---~~~~~~E~~~~~~~~~hpn-Iv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD---CPKARREVELHWRASQCPH-IVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC---SHHHHHHHHHHHHHTTSTT-BCCEEEEEEEEETTEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC---cHHHHHHHHHHHHhcCCCC-CCeEEEEEeecccCCCEEE
Confidence            57899875 59999999999999999999999999864   34577899987665 6888 9999999875    46789


Q ss_pred             EEEeccCCCChHHHhh-----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecC--CCceEEEeeecccc
Q 004835          274 FVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCK--AVKGYLIDFNLAMV  344 (728)
Q Consensus       274 LV~E~~~~~~l~~l~~-----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~--~~~~kL~DFGlA~~  344 (728)
                      +|||||++|+|..++.     .+++.+++.|+.||+.||+|||++||+||||||+|||++..  .+.+||+|||+|+.
T Consensus        86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~  163 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  163 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeee
Confidence            9999999988876653     38899999999999999999999999999999999999842  35699999999975


No 32 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.7e-49  Score=424.24  Aligned_cols=291  Identities=24%  Similarity=0.315  Sum_probs=213.4

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC----chhHHHHHHHHHHhcCCCCceEEecceEEe------C
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA----SKHYVSNELRMLERFGGKNFIIKYEGCFKC------G  269 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~----~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~------~  269 (728)
                      +++|+++++||+|+||+||+|++..+|+.||||++....    ...++.+|+.+|++++|+| |++++++|..      .
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpn-Iv~~~~~f~~~~~~~~~   94 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN-IISLLNVFTPQKTLEEF   94 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTT-BCCCSEEECSCCSTTTC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCC-eeEEEEEEecccccccC
Confidence            368999999999999999999999999999999987542    2345789999999999998 9999999963      3


Q ss_pred             CeeEEEEeccCCCChHHHhhcCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCC
Q 004835          270 DSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGS  349 (728)
Q Consensus       270 ~~~~LV~E~~~~~~l~~l~~~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~  349 (728)
                      .++|+||||+.++++..+...+++..++.++.||+.||.|||++||+||||||+|||++ .++.++++|||+++..... 
T Consensus        95 ~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~-~~~~~kl~df~~~~~~~~~-  172 (355)
T d2b1pa1          95 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTS-  172 (355)
T ss_dssp             CEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTCCEEECCCCC--------
T ss_pred             ceeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc-cccceeeechhhhhccccc-
Confidence            68899999999999988888899999999999999999999999999999999999999 5567899999998641100 


Q ss_pred             CccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCccccccc
Q 004835          350 FNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEA  429 (728)
Q Consensus       350 ~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~  429 (728)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (355)
T d2b1pa1         173 --------------------------------------------------------------------------------  172 (355)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCC
Q 004835          430 TSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLM  509 (728)
Q Consensus       430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (728)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (355)
T d2b1pa1         173 --------------------------------------------------------------------------------  172 (355)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCC
Q 004835          510 NKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGR  589 (728)
Q Consensus       510 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~  589 (728)
                                                          ...+..+||+.|+|||++.+. .++.++||||+||++|+|++|+
T Consensus       173 ------------------------------------~~~~~~~~t~~y~aPE~l~~~-~~~~~~DiwSlG~~l~ell~g~  215 (355)
T d2b1pa1         173 ------------------------------------FMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK  215 (355)
T ss_dssp             --------------------------------------------CCTTCCHHHHTTC-CCCTTHHHHHHHHHHHHHHHSS
T ss_pred             ------------------------------------cccccccccccccChhhhcCC-CCCCCcccccccchHHHHhhCC
Confidence                                                011234689999999999765 4699999999999999999999


Q ss_pred             CCCCCCCh-HHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhh--hhhccCCcccccCchhHHHHHH
Q 004835          590 TPFFGDPE-QNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWC--KLITKRPDFLEVIPSSLFDLVD  666 (728)
Q Consensus       590 ~PF~~~~~-~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~dLi~  666 (728)
                      +||.+.+. ..+..++...+.+....+.......   ..-................  ............+++++.|||.
T Consensus       216 ~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~  292 (355)
T d2b1pa1         216 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV---RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS  292 (355)
T ss_dssp             CSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHH---HHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhH---HHHhhcCccccccccccccccccccccccccccCCHHHHHHHH
Confidence            99998876 4566677766653222211110000   0000000000000000000  0111112233456788999999


Q ss_pred             HhcccCCCCCCCHHHHhcCCCCccchh
Q 004835          667 KCLTVNPRLRISAEDALKHEFFAPCHE  693 (728)
Q Consensus       667 ~~L~~dP~~Rpta~e~L~Hp~f~~~~~  693 (728)
                      +||.+||++||||+|||+||||+...+
T Consensus       293 ~mL~~dP~~R~ta~elL~Hpw~~~~~~  319 (355)
T d2b1pa1         293 KMLVIDPAKRISVDDALQHPYINVWYD  319 (355)
T ss_dssp             HHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred             HHCcCChhHCcCHHHHhcCcccCCCCC
Confidence            999999999999999999999997543


No 33 
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=4.4e-48  Score=407.52  Aligned_cols=148  Identities=19%  Similarity=0.236  Sum_probs=133.8

Q ss_pred             ccCCCCCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc-CchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeE
Q 004835          195 KVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN-ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDC  273 (728)
Q Consensus       195 ~~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~-~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~  273 (728)
                      ++..+.++|++.+.||+|+||+||+|++..+|+.||||+++.. ...+.+.+|+.+|++++||| |+++++++.+++..|
T Consensus        11 ~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~Hpn-Iv~~~~~~~~~~~~~   89 (287)
T d1opja_          11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN-LVQLLGVCTREPPFY   89 (287)
T ss_dssp             TTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTT-BCCEEEEECSSSSCE
T ss_pred             ccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCC-EecCCccEeeCCeeE
Confidence            3455667999999999999999999999999999999998754 34567899999999999999 999999999999999


Q ss_pred             EEEeccCCCChHHHhh-----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          274 FVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       274 LV~E~~~~~~l~~l~~-----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      +||||+++|++..+..     .+++..++.|+.||+.||+|||++|||||||||+||||+ .++.+||+|||+|+.
T Consensus        90 iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~-~~~~~Kl~DFG~a~~  164 (287)
T d1opja_          90 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL  164 (287)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-GGGCEEECCCCCTTT
T ss_pred             EEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEEC-CCCcEEEccccceee
Confidence            9999999998776642     378999999999999999999999999999999999999 667899999999975


No 34 
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-48  Score=404.26  Aligned_cols=146  Identities=18%  Similarity=0.271  Sum_probs=128.9

Q ss_pred             ccCCCCCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc-CchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeE
Q 004835          195 KVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN-ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDC  273 (728)
Q Consensus       195 ~~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~-~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~  273 (728)
                      ++....++|++.+.||+|+||+||+|++. +++.||||+++.. ...+.+.+|+.++.+++|+| |+++++++. .+..|
T Consensus         7 ~wei~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~Hpn-Iv~~~g~~~-~~~~~   83 (272)
T d1qpca_           7 EWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR-LVRLYAVVT-QEPIY   83 (272)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTT-BCCEEEEEC-SSSCE
T ss_pred             CeecCHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCC-EeEEEeeec-cCCeE
Confidence            34445679999999999999999999985 6789999998754 34567899999999999999 999999875 45679


Q ss_pred             EEEeccCCCChHHHhh-----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          274 FVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       274 LV~E~~~~~~l~~l~~-----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      +||||+++|++..+..     .+++..+..|+.||+.||.|||+++|+||||||+||||+ +++.+||+|||+|+.
T Consensus        84 iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~-~~~~~Kl~DFGla~~  158 (272)
T d1qpca_          84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARL  158 (272)
T ss_dssp             EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-TTSCEEECCCTTCEE
T ss_pred             EEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeee-cccceeeccccceEE
Confidence            9999999999876542     389999999999999999999999999999999999999 677899999999985


No 35 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-47  Score=412.93  Aligned_cols=287  Identities=26%  Similarity=0.356  Sum_probs=213.6

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCc---hhHHHHHHHHHHhcCCCCceEEecceEEeCC-----ee
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS---KHYVSNELRMLERFGGKNFIIKYEGCFKCGD-----SD  272 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~---~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~-----~~  272 (728)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.....   ...+.+|+.+|++++|++ |+++++++....     ..
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~-iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-IIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTT-BCCCCEEECCSSTTTCCCE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCC-CCcEEEEEeeccccccceE
Confidence            479999999999999999999999999999999875433   346789999999999999 999999987543     34


Q ss_pred             EEEEeccCCCChHHHh--hcCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCCC
Q 004835          273 CFVLEHVKHDRPEVLK--KEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGSF  350 (728)
Q Consensus       273 ~LV~E~~~~~~l~~l~--~~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~~  350 (728)
                      |++ +|+.+++|..+.  +.+++..++.++.||+.||+|||++|||||||||+||||+ +++.+||+|||+|........
T Consensus        87 ~l~-~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~-~~~~~kl~DfG~a~~~~~~~~  164 (345)
T d1pmea_          87 YLV-THLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHD  164 (345)
T ss_dssp             EEE-EECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-TTCCEEECCCTTCEECCGGGC
T ss_pred             EEE-EeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEEC-CCCCEEEcccCceeeccCCCc
Confidence            555 455566666554  3599999999999999999999999999999999999999 667899999999975211000


Q ss_pred             ccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccccccc
Q 004835          351 NQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEAT  430 (728)
Q Consensus       351 ~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~  430 (728)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (345)
T d1pmea_         165 --------------------------------------------------------------------------------  164 (345)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCCC
Q 004835          431 STRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLMN  510 (728)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (728)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (345)
T d1pmea_         165 --------------------------------------------------------------------------------  164 (345)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCCC
Q 004835          511 KGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGRT  590 (728)
Q Consensus       511 ~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~~  590 (728)
                                                       ........+||+.|+|||++.....++.++||||+||++|+|++|++
T Consensus       165 ---------------------------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~  211 (345)
T d1pmea_         165 ---------------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP  211 (345)
T ss_dssp             ---------------------------------BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSC
T ss_pred             ---------------------------------cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCC
Confidence                                             00011245799999999999777677999999999999999999999


Q ss_pred             CCCCCCh-HHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHhc
Q 004835          591 PFFGDPE-QNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKCL  669 (728)
Q Consensus       591 PF~~~~~-~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~L  669 (728)
                      ||.+.+. +....+....+.+.........     +..........+......|..       ....++.++.+||.+||
T Consensus       212 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~~~s~~~~~li~~~L  279 (345)
T d1pmea_         212 IFPGKHYLDQLNHILGILGSPSQEDLNCII-----NLKARNYLLSLPHKNKVPWNR-------LFPNADSKALDLLDKML  279 (345)
T ss_dssp             SCCCSSHHHHHHHHHHHHCSCCHHHHHTCC-----CHHHHHHHHTSCCCCCCCHHH-------HCTTSCHHHHHHHHHHS
T ss_pred             CCCCCCHHHHHHHHhhhccCCChhhhhhhh-----hhhhhcccccCCccCCCCHHH-------hCCCCCHHHHHHHHHHc
Confidence            9988776 4555666666654433221100     000001111122222222322       22457789999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCccchhcc
Q 004835          670 TVNPRLRISAEDALKHEFFAPCHEML  695 (728)
Q Consensus       670 ~~dP~~Rpta~e~L~Hp~f~~~~~~~  695 (728)
                      .+||.+||||+|+|+||||+......
T Consensus       280 ~~dP~~R~ta~e~L~hpf~~~~~~~~  305 (345)
T d1pmea_         280 TFNPHKRIEVEQALAHPYLEQYYDPS  305 (345)
T ss_dssp             CSSTTTSCCHHHHHTSGGGTTTCCGG
T ss_pred             cCChhHCcCHHHHhcCHhhccCCCCc
Confidence            99999999999999999999766544


No 36 
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-47  Score=397.74  Aligned_cols=142  Identities=19%  Similarity=0.225  Sum_probs=125.6

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc-CchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEec
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN-ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH  278 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~-~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E~  278 (728)
                      -++|++.+.||+|+||+||+|++. +++.||||+++.. ...+.+.+|+.++.+++||| |+++++++..++..|+||||
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~Hpn-Iv~~~g~~~~~~~~~lv~E~   81 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK-LVQLYGVCLEQAPICLVFEF   81 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTT-BCCEEEEECSSSSCEEEEEC
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCC-cccccceeccCCceEEEEEe
Confidence            458999999999999999999986 6788999998754 34567899999999999999 99999999999999999999


Q ss_pred             cCCCChHHHhh----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          279 VKHDRPEVLKK----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       279 ~~~~~l~~l~~----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      +.++++..+..    .+++..+..|+.||+.||.|||+++|+||||||+||||+ .++.+||+|||+|+.
T Consensus        82 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~-~~~~~Kl~DFGla~~  150 (263)
T d1sm2a_          82 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTRF  150 (263)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEEC-GGGCEEECSCC----
T ss_pred             cCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeec-CCCCeEecccchhee
Confidence            99999877643    278899999999999999999999999999999999999 667899999999975


No 37 
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.5e-47  Score=405.63  Aligned_cols=144  Identities=21%  Similarity=0.303  Sum_probs=122.8

Q ss_pred             CCCCeeEEEEecccCceEEEEEEEcCCCe---EEEEEeccCcCc---hhHHHHHHHHHHhcCCCCceEEecceEEeCCee
Q 004835          199 NFESFIVEEEEGSGGYGTVYRARRKNDGT---VVAIKCPHANAS---KHYVSNELRMLERFGGKNFIIKYEGCFKCGDSD  272 (728)
Q Consensus       199 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~---~VAIK~i~~~~~---~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~  272 (728)
                      ..+.|++.++||+|+||+||+|+++.+|+   .||||++.....   .+.+.+|+.+|++++||| |+++++++..++..
T Consensus        24 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~Hpn-Iv~l~g~~~~~~~~  102 (299)
T d1jpaa_          24 DISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN-VIHLEGVVTKSTPV  102 (299)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTT-BCCEEEEECSSSSC
T ss_pred             ChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCC-CccEEEEEeeCCEE
Confidence            34689999999999999999999986664   689998865433   356889999999999999 99999999999999


Q ss_pred             EEEEeccCCCChHHHhh----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          273 CFVLEHVKHDRPEVLKK----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       273 ~LV~E~~~~~~l~~l~~----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      |+||||++++++..+..    .+++.++..|+.||+.||+|||++|||||||||+||||+ .++.+||+|||+|+.
T Consensus       103 ~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~-~~~~~Kl~DFGla~~  177 (299)
T d1jpaa_         103 MIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVN-SNLVCKVSDFGLSRF  177 (299)
T ss_dssp             EEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTCCEEECCC-----
T ss_pred             EEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEEC-CCCcEEECCcccceE
Confidence            99999999999887543    389999999999999999999999999999999999999 677899999999975


No 38 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-47  Score=411.19  Aligned_cols=269  Identities=23%  Similarity=0.371  Sum_probs=214.3

Q ss_pred             CCCCeeEEEEecccCceEEEEEEEc---CCCeEEEEEeccCc------CchhHHHHHHHHHHhcCCCCceEEecceEEeC
Q 004835          199 NFESFIVEEEEGSGGYGTVYRARRK---NDGTVVAIKCPHAN------ASKHYVSNELRMLERFGGKNFIIKYEGCFKCG  269 (728)
Q Consensus       199 ~~~~y~i~~~LG~G~fG~Vy~a~~~---~~g~~VAIK~i~~~------~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~  269 (728)
                      .+++|++++.||+|+||+||+|++.   .+|+.||||+++..      ...+.+.+|+.++++++|+++|+++++++...
T Consensus        22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~  101 (322)
T d1vzoa_          22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  101 (322)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence            4688999999999999999999974   46899999998642      23456789999999999976699999999999


Q ss_pred             CeeEEEEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccccc
Q 004835          270 DSDCFVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGF  346 (728)
Q Consensus       270 ~~~~LV~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~  346 (728)
                      ...++||||+.++++..+..   .+++..++.++.||+.||.|||++|||||||||+||||+ .++.+||+|||+|+...
T Consensus       102 ~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~-~~~~vkL~DFG~a~~~~  180 (322)
T d1vzoa_         102 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD-SNGHVVLTDFGLSKEFV  180 (322)
T ss_dssp             TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTSCEEESCSSEEEECC
T ss_pred             CceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeec-CCCCEEEeeccchhhhc
Confidence            99999999999998877653   378899999999999999999999999999999999999 56789999999997521


Q ss_pred             CCCCccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCcccc
Q 004835          347 DGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSA  426 (728)
Q Consensus       347 ~~~~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~  426 (728)
                      ....                                                                            
T Consensus       181 ~~~~----------------------------------------------------------------------------  184 (322)
T d1vzoa_         181 ADET----------------------------------------------------------------------------  184 (322)
T ss_dssp             GGGG----------------------------------------------------------------------------
T ss_pred             cccc----------------------------------------------------------------------------
Confidence            1000                                                                            


Q ss_pred             ccccccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccC
Q 004835          427 KEATSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGA  506 (728)
Q Consensus       427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (728)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (322)
T d1vzoa_         185 --------------------------------------------------------------------------------  184 (322)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccC-CCCCchhHHHHHHHHHHH
Q 004835          507 GLMNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQ-HQGPKLDIWSAGVTLLYL  585 (728)
Q Consensus       507 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~-~~~~~~DIWSlG~il~eL  585 (728)
                                                             .......||+.|+|||++.+.. .++.++|||||||+||+|
T Consensus       185 ---------------------------------------~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyel  225 (322)
T d1vzoa_         185 ---------------------------------------ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYEL  225 (322)
T ss_dssp             ---------------------------------------GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHH
T ss_pred             ---------------------------------------ccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHH
Confidence                                                   0011335899999999996543 468899999999999999


Q ss_pred             hcCCCCCCCCChHH-HHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHH
Q 004835          586 MIGRTPFFGDPEQN-IKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDL  664 (728)
Q Consensus       586 ltG~~PF~~~~~~~-l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dL  664 (728)
                      ++|..||.+..... ...+.+                                       ......+.++..+++++.+|
T Consensus       226 ltG~~PF~~~~~~~~~~~i~~---------------------------------------~~~~~~~~~~~~~s~~~~~l  266 (322)
T d1vzoa_         226 LTGASPFTVDGEKNSQAEISR---------------------------------------RILKSEPPYPQEMSALAKDL  266 (322)
T ss_dssp             HHSSCTTSCTTSCCCHHHHHH---------------------------------------HHHHCCCCCCTTSCHHHHHH
T ss_pred             HhCCCCCCCCCHHHHHHHHHH---------------------------------------hcccCCCCCcccCCHHHHHH
Confidence            99999998765422 222111                                       01112334456789999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHhcCCCCccchhcchHhHhhh
Q 004835          665 VDKCLTVNPRLRI-----SAEDALKHEFFAPCHEMLRKQKLLR  702 (728)
Q Consensus       665 i~~~L~~dP~~Rp-----ta~e~L~Hp~f~~~~~~~~~~~~~~  702 (728)
                      |.+||.+||++||     ||+|+|+||||+++++.--.++.++
T Consensus       267 i~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l~~~~~~  309 (322)
T d1vzoa_         267 IQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVP  309 (322)
T ss_dssp             HHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSC
T ss_pred             HHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCHHHHHhCCCC
Confidence            9999999999999     5999999999999886433333333


No 39 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-47  Score=408.68  Aligned_cols=146  Identities=21%  Similarity=0.262  Sum_probs=126.8

Q ss_pred             CCCCCCeeEEEEecccCceEEEEEEEcCCC-----eEEEEEeccCc---CchhHHHHHHHHHHhc-CCCCceEEecceEE
Q 004835          197 LPNFESFIVEEEEGSGGYGTVYRARRKNDG-----TVVAIKCPHAN---ASKHYVSNELRMLERF-GGKNFIIKYEGCFK  267 (728)
Q Consensus       197 ~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~g-----~~VAIK~i~~~---~~~~~~~~Ei~iL~~L-~h~n~Ivkl~~~~~  267 (728)
                      ....++|+++++||+|+||+||+|++..++     ..||+|++...   .....+.+|+.++.++ +||| |+++++++.
T Consensus        33 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~Hpn-Iv~l~~~~~  111 (325)
T d1rjba_          33 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN-IVNLLGACT  111 (325)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTT-BCCEEEEEC
T ss_pred             cCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCc-EeEEEEEEe
Confidence            344578999999999999999999987554     37999988643   3345688999999998 7888 999999999


Q ss_pred             eCCeeEEEEeccCCCChHHHhh--------------------------cCChHHHHHHHHHHHHHHHHHHhCCcEeccCC
Q 004835          268 CGDSDCFVLEHVKHDRPEVLKK--------------------------EIDLSQLQWYGYCLFRALASLHKQGIVHRDVK  321 (728)
Q Consensus       268 ~~~~~~LV~E~~~~~~l~~l~~--------------------------~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIK  321 (728)
                      ..+..|+||||+++|++..+++                          .+++..++.|+.||+.||+|||+++|||||||
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlK  191 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA  191 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCc
Confidence            9999999999999999877652                          27888999999999999999999999999999


Q ss_pred             CCceEeecCCCceEEEeeecccc
Q 004835          322 PGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       322 PeNILld~~~~~~kL~DFGlA~~  344 (728)
                      |+|||++ .++.+||+|||+|+.
T Consensus       192 p~Nill~-~~~~~Kl~DFGla~~  213 (325)
T d1rjba_         192 ARNVLVT-HGKVVKICDFGLARD  213 (325)
T ss_dssp             GGGEEEE-TTTEEEECCCGGGSC
T ss_pred             hhccccc-cCCeEEEeecccccc
Confidence            9999999 677899999999975


No 40 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-47  Score=409.96  Aligned_cols=280  Identities=27%  Similarity=0.408  Sum_probs=212.4

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC----chhHHHHHHHHHHhcCCCCceEEecceEEeC-----Ce
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA----SKHYVSNELRMLERFGGKNFIIKYEGCFKCG-----DS  271 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~----~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~-----~~  271 (728)
                      ++|+++++||+|+||+||+|++..+|+.||||++....    ...++.+|+.+|++++|+| |+++++++...     ..
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~-iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTT-BCCCSEEECSCSSTTTCC
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCC-eeeEEEEEeeccccccCc
Confidence            58999999999999999999999999999999987542    2346789999999999999 99999998643     23


Q ss_pred             eEEEEeccCCCChHHHhh--cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeeccccccCCC
Q 004835          272 DCFVLEHVKHDRPEVLKK--EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMVGFDGS  349 (728)
Q Consensus       272 ~~LV~E~~~~~~l~~l~~--~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~~~~~~  349 (728)
                      .++||+|+.+++|..+..  .+++..++.++.||+.||+|||++||+||||||+|||++ .++.+|++|||+|.....  
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~-~~~~~kl~dfg~a~~~~~--  173 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDD--  173 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-TTCCEEECCC----CCTG--
T ss_pred             eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccc-ccccccccccchhcccCc--
Confidence            456666777777777653  499999999999999999999999999999999999999 667899999999863100  


Q ss_pred             CccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCcccccccCCCCCCCccccccc
Q 004835          350 FNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINSQGADGSGITSAKEA  429 (728)
Q Consensus       350 ~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~  429 (728)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (348)
T d2gfsa1         174 --------------------------------------------------------------------------------  173 (348)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCCCCCCCcccccCCCC
Q 004835          430 TSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMPLHSNGIAVAGAGLM  509 (728)
Q Consensus       430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (728)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (348)
T d2gfsa1         174 --------------------------------------------------------------------------------  173 (348)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhHHHHHHHHHHHhcCC
Q 004835          510 NKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDIWSAGVTLLYLMIGR  589 (728)
Q Consensus       510 ~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DIWSlG~il~eLltG~  589 (728)
                                                           ......||+.|+|||++.+...++.++|||||||++|+|++|+
T Consensus       174 -------------------------------------~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~  216 (348)
T d2gfsa1         174 -------------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR  216 (348)
T ss_dssp             -------------------------------------GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             -------------------------------------ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCC
Confidence                                                 0013458899999999888877899999999999999999999


Q ss_pred             CCCCCCCh-HHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhccCCcccccCchhHHHHHHHh
Q 004835          590 TPFFGDPE-QNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLITKRPDFLEVIPSSLFDLVDKC  668 (728)
Q Consensus       590 ~PF~~~~~-~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dLi~~~  668 (728)
                      +||.+.+. .....+....|.+..........     ..........+......|..       ....++++++|||.+|
T Consensus       217 ~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-------~~~~~s~~~~dli~~m  284 (348)
T d2gfsa1         217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISS-----ESARNYIQSLTQMPKMNFAN-------VFIGANPLAVDLLEKM  284 (348)
T ss_dssp             CSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCC-----HHHHHHHTTSCCCCCCCHHH-------HSTTCCHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHhcCCCChHHhhhccc-----hhhhhhhhhcccCCCcchhh-------hcCCCCHHHHHHHHHH
Confidence            99998876 45666677666543322111000     00000000111111111111       1245789999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCccchh
Q 004835          669 LTVNPRLRISAEDALKHEFFAPCHE  693 (728)
Q Consensus       669 L~~dP~~Rpta~e~L~Hp~f~~~~~  693 (728)
                      |.+||.+||||+|+|+||||++++.
T Consensus       285 L~~dP~~R~ta~elL~Hp~f~~~~~  309 (348)
T d2gfsa1         285 LVLDSDKRITAAQALAHAYFAQYHD  309 (348)
T ss_dssp             SCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             CcCChhhCcCHHHHhcCHhhCCCCC
Confidence            9999999999999999999998764


No 41 
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-47  Score=402.53  Aligned_cols=143  Identities=22%  Similarity=0.278  Sum_probs=124.0

Q ss_pred             cCCCCCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc----CchhHHHHHHHHHHhcCCCCceEEecceEEeCCe
Q 004835          196 VLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN----ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDS  271 (728)
Q Consensus       196 ~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~----~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~  271 (728)
                      +....++|++.+.||+|+||+||+|++.   ..||||+++..    ...+.+.+|+.++.+++|+| |+++++++. .+.
T Consensus         3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpn-Iv~~~~~~~-~~~   77 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN-ILLFMGYST-APQ   77 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTT-BCCEEEEEC-SSS
T ss_pred             cccccccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCC-EeeeeEEEe-ccE
Confidence            3445678999999999999999999863   35999998743    23456889999999999999 999998765 567


Q ss_pred             eEEEEeccCCCChHHHhh----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          272 DCFVLEHVKHDRPEVLKK----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       272 ~~LV~E~~~~~~l~~l~~----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      +|+||||+++++|..+..    .+++..+..|+.||+.||+|||++|||||||||+||||+ .++.+||+|||+|+.
T Consensus        78 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~-~~~~~Kl~DFGla~~  153 (276)
T d1uwha_          78 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-EDLTVKIGDFGLATV  153 (276)
T ss_dssp             CEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE-TTSSEEECCCCCSCC
T ss_pred             EEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEc-CCCCEEEccccceee
Confidence            899999999988877652    389999999999999999999999999999999999999 677899999999975


No 42 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.9e-47  Score=401.03  Aligned_cols=143  Identities=18%  Similarity=0.267  Sum_probs=124.1

Q ss_pred             CCCCeeEEEE-ecccCceEEEEEEEcC--CCeEEEEEeccCcCc---hhHHHHHHHHHHhcCCCCceEEecceEEeCCee
Q 004835          199 NFESFIVEEE-EGSGGYGTVYRARRKN--DGTVVAIKCPHANAS---KHYVSNELRMLERFGGKNFIIKYEGCFKCGDSD  272 (728)
Q Consensus       199 ~~~~y~i~~~-LG~G~fG~Vy~a~~~~--~g~~VAIK~i~~~~~---~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~  272 (728)
                      .-++|.+.+. ||+|+||+||+|.++.  ++..||||+++....   .+.+.+|+.+|++++||| |+++++++.. +.+
T Consensus         6 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~g~~~~-~~~   83 (285)
T d1u59a_           6 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPY-IVRLIGVCQA-EAL   83 (285)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTT-BCCEEEEEES-SSE
T ss_pred             cccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCC-EeeEeeeecc-CeE
Confidence            3467888885 9999999999998754  456899999875432   356889999999999999 9999999864 568


Q ss_pred             EEEEeccCCCChHHHhh----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          273 CFVLEHVKHDRPEVLKK----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       273 ~LV~E~~~~~~l~~l~~----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      |+||||+++++|..+..    .+++..+..|+.||+.||+|||++|||||||||+||||+ .++.+||+|||+|+.
T Consensus        84 ~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~-~~~~~Kl~DFGla~~  158 (285)
T d1u59a_          84 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV-NRHYAKISDFGLSKA  158 (285)
T ss_dssp             EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE-ETTEEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeec-cCCceeeccchhhhc
Confidence            99999999999877642    389999999999999999999999999999999999999 667899999999985


No 43 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-47  Score=400.10  Aligned_cols=135  Identities=21%  Similarity=0.247  Sum_probs=117.3

Q ss_pred             EEecccCceEEEEEEEcC--CCeEEEEEeccCcC----chhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEeccC
Q 004835          207 EEEGSGGYGTVYRARRKN--DGTVVAIKCPHANA----SKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK  280 (728)
Q Consensus       207 ~~LG~G~fG~Vy~a~~~~--~g~~VAIK~i~~~~----~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E~~~  280 (728)
                      ++||+|+||+||+|.+..  +++.||||+++...    ..+.+.+|+.+|++++||| |+++++++.. +..||||||++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~~~g~~~~-~~~~lvmE~~~   90 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY-IVRMIGICEA-ESWMLVMEMAE   90 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTT-BCCEEEEEES-SSEEEEEECCT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCC-CceEEEEecc-CCEEEEEEcCC
Confidence            469999999999998753  45789999986432    2356889999999999999 9999999864 56799999999


Q ss_pred             CCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          281 HDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       281 ~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      ++++..+.+   .+++..+..|+.||+.||+|||+++||||||||+||||+ .++.+||+|||+|+.
T Consensus        91 ~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~-~~~~~kl~DFGla~~  156 (277)
T d1xbba_          91 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV-TQHYAKISDFGLSKA  156 (277)
T ss_dssp             TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE-ETTEEEECCCTTCEE
T ss_pred             CCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccc-ccCcccccchhhhhh
Confidence            999877654   389999999999999999999999999999999999999 667899999999975


No 44 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=4.3e-47  Score=396.77  Aligned_cols=142  Identities=23%  Similarity=0.200  Sum_probs=126.2

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCc-----hhHHHHHHHHHHhcCCCCceEEecceEEeCC----e
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS-----KHYVSNELRMLERFGGKNFIIKYEGCFKCGD----S  271 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~-----~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~----~  271 (728)
                      ++|++.+.||+|+||+||+|++..+|+.||||+++....     ...+.+|+.+++.++||| |+++++++...+    .
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpn-iv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA-IVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTT-BCCEEEEEEEECSSSEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCC-CCcccceeeeccCCCce
Confidence            579999999999999999999999999999999875422     345789999999999999 999999987644    4


Q ss_pred             eEEEEeccCCCChHHHhh---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          272 DCFVLEHVKHDRPEVLKK---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       272 ~~LV~E~~~~~~l~~l~~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      +|+||||+.++.+..+..   .+++.+++.|+.||+.||+|||++|||||||||+||||+ .++..+|+|||++..
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~-~~~~~~l~d~~~~~~  160 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARA  160 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE-TTSCEEECCCTTCEE
T ss_pred             EEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccC-ccccceeehhhhhhh
Confidence            899999999998876543   489999999999999999999999999999999999999 667799999999864


No 45 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7e-47  Score=392.48  Aligned_cols=142  Identities=18%  Similarity=0.181  Sum_probs=128.8

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc-CchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEec
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN-ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH  278 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~-~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E~  278 (728)
                      .++|++.++||+|+||+||+|+++ +++.||||+++.. ...+.+.+|+.++.+++|+| |+++++++.+.+.+++||||
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~Hpn-Iv~~~g~~~~~~~~~iv~Ey   80 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK-LVQLYGVCTKQRPIFIITEY   80 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTT-BCCEEEEECCSSSEEEEEEC
T ss_pred             hHHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCc-eeeEEEEEeeCCceEEEEEc
Confidence            368999999999999999999985 7889999998754 35677899999999999999 99999999999999999999


Q ss_pred             cCCCChHHHh----hcCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          279 VKHDRPEVLK----KEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       279 ~~~~~l~~l~----~~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      +.+|++..+.    ..+++..+..++.||+.||+|||++||+||||||+||||+ .++.+||+|||+|+.
T Consensus        81 ~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~-~~~~~kl~DfG~a~~  149 (258)
T d1k2pa_          81 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRY  149 (258)
T ss_dssp             CTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEEC-TTCCEEECCCSSCCB
T ss_pred             cCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEc-CCCcEEECcchhhee
Confidence            9998877663    2388999999999999999999999999999999999999 667899999999975


No 46 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-46  Score=395.51  Aligned_cols=146  Identities=21%  Similarity=0.253  Sum_probs=127.4

Q ss_pred             ccCCCCCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC-chhHHHHHHHHHHhcCCCCceEEecceEEeCCeeE
Q 004835          195 KVLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA-SKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDC  273 (728)
Q Consensus       195 ~~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~-~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~  273 (728)
                      ++....++|++.+.||+|+||+||+|++.. ++.||||++.... ..+.+.+|+.++++++|+| |+++++++. .+..|
T Consensus        11 ~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~-~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~n-Iv~~~g~~~-~~~~~   87 (285)
T d1fmka3          11 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEK-LVQLYAVVS-EEPIY   87 (285)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTT-BCCEEEEEC-SSSCE
T ss_pred             ceEcCHHHEEEeeEEeeCCCeEEEEEEECC-CCEEEEEEECcccCCHHHHHHHHHHHHhcccCC-EeEEEEEEe-cCCeE
Confidence            334456899999999999999999999964 4679999987543 4567899999999999999 999999985 45689


Q ss_pred             EEEeccCCCChHHHhh-----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          274 FVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       274 LV~E~~~~~~l~~l~~-----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      +||||+.+|++..+..     .+++.+++.|+.||+.||+|||++||+||||||+||||+ +++.+||+|||+|+.
T Consensus        88 lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~-~~~~~kl~DfGla~~  162 (285)
T d1fmka3          88 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARL  162 (285)
T ss_dssp             EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-GGGCEEECCCCTTC-
T ss_pred             EEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEEC-CCCcEEEcccchhhh
Confidence            9999999998776542     389999999999999999999999999999999999999 667899999999975


No 47 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-46  Score=392.02  Aligned_cols=143  Identities=26%  Similarity=0.308  Sum_probs=119.6

Q ss_pred             CCCCeeEEEEecccCceEEEEEEEcCC---CeEEEEEeccCcCc---hhHHHHHHHHHHhcCCCCceEEecceEEeCCee
Q 004835          199 NFESFIVEEEEGSGGYGTVYRARRKND---GTVVAIKCPHANAS---KHYVSNELRMLERFGGKNFIIKYEGCFKCGDSD  272 (728)
Q Consensus       199 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~---g~~VAIK~i~~~~~---~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~  272 (728)
                      .-++|++.+.||+|+||+||+|++..+   +..||||.++....   ...+.+|+.++++++||| |+++++++. .+..
T Consensus         5 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~Hpn-Iv~l~~~~~-~~~~   82 (273)
T d1mp8a_           5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH-IVKLIGVIT-ENPV   82 (273)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTT-BCCEEEEEC-SSSC
T ss_pred             CHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCC-EeeEEEEEe-cCeE
Confidence            346899999999999999999998654   35799998864332   356889999999999999 999999986 5678


Q ss_pred             EEEEeccCCCChHHHhh----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          273 CFVLEHVKHDRPEVLKK----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       273 ~LV~E~~~~~~l~~l~~----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      |+||||+.++.+..+..    .+++..++.++.||+.||.|||+++||||||||+|||++ ..+.+||+|||+|+.
T Consensus        83 ~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~-~~~~~Kl~DfG~a~~  157 (273)
T d1mp8a_          83 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRY  157 (273)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE-ETTEEEECC------
T ss_pred             EEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeec-CCCcEEEccchhhee
Confidence            99999999998876532    388999999999999999999999999999999999999 667899999999975


No 48 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-45  Score=388.16  Aligned_cols=143  Identities=23%  Similarity=0.291  Sum_probs=123.9

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCC----eEEEEEeccCcCc---hhHHHHHHHHHHhcCCCCceEEecceEEeCCee
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDG----TVVAIKCPHANAS---KHYVSNELRMLERFGGKNFIIKYEGCFKCGDSD  272 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g----~~VAIK~i~~~~~---~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~  272 (728)
                      .+.|++.++||+|+||+||+|.++.++    ..||||++.....   ...+.+|+.++.+++|+| |+++++++...+..
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~n-Iv~~~g~~~~~~~~   84 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN-IIRLEGVISKYKPM   84 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTT-BCCEEEEECSSSSE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCC-EeeeeEEEecCCce
Confidence            357999999999999999999987654    4799999875432   345789999999999999 99999999999999


Q ss_pred             EEEEeccCCCChHHHhh----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          273 CFVLEHVKHDRPEVLKK----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       273 ~LV~E~~~~~~l~~l~~----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      ++||||+.++++..+..    .+++..+..++.||+.||.|||+++||||||||+||||+ .++.+||+|||+|+.
T Consensus        85 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~-~~~~~Kl~DFGla~~  159 (283)
T d1mqba_          85 MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN-SNLVCKVSDFGLSRV  159 (283)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTCCEEECCCCC---
T ss_pred             EEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEEC-CCCeEEEcccchhhc
Confidence            99999999998776542    389999999999999999999999999999999999999 677899999999975


No 49 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-45  Score=384.42  Aligned_cols=145  Identities=20%  Similarity=0.252  Sum_probs=125.9

Q ss_pred             cCCCCCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCchhHHHHHHHHHHhcCCCCceEEecceEEe-CCeeEE
Q 004835          196 VLPNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKC-GDSDCF  274 (728)
Q Consensus       196 ~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~-~~~~~L  274 (728)
                      +....++|++++.||+|+||.||+|++  .|+.||||+++.....+.+.+|+.++++++|+| |+++++++.. .+.+|+
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~Hpn-Iv~~~g~~~~~~~~~~l   78 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSN-LVQLLGVIVEEKGGLYI   78 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTT-BCCEEEEECCC--CCEE
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCC-EeeEEEEEEecCCcEEE
Confidence            345677999999999999999999998  488999999988877888999999999999999 9999998854 467899


Q ss_pred             EEeccCCCChHHHhh-----cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          275 VLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       275 V~E~~~~~~l~~l~~-----~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      ||||++++++..+..     .+++..++.|+.||+.||.|||+++|+||||||+|||++ .++.+||+|||+++.
T Consensus        79 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~-~~~~~kl~dfg~s~~  152 (262)
T d1byga_          79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS-EDNVAKVSDFGLTKE  152 (262)
T ss_dssp             EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-TTSCEEECCCCC---
T ss_pred             EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheec-CCCCEeeccccccee
Confidence            999999998877642     289999999999999999999999999999999999999 667899999999874


No 50 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-45  Score=389.07  Aligned_cols=146  Identities=21%  Similarity=0.296  Sum_probs=116.1

Q ss_pred             CCCCCeeEEEEecccCceEEEEEEEcC-----CCeEEEEEeccCcCc---hhHHHHHHHHHHhcCCCCceEEecceEEe-
Q 004835          198 PNFESFIVEEEEGSGGYGTVYRARRKN-----DGTVVAIKCPHANAS---KHYVSNELRMLERFGGKNFIIKYEGCFKC-  268 (728)
Q Consensus       198 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-----~g~~VAIK~i~~~~~---~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~-  268 (728)
                      ...++|++.+.||+|+||.||+|++..     +++.||||+++....   ...+.+|..++.++.|+++|+.+++++.. 
T Consensus        10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~   89 (299)
T d1ywna1          10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP   89 (299)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence            344789999999999999999999754     457899999875432   34577888888888766668888887665 


Q ss_pred             CCeeEEEEeccCCCChHHHhh-------------------cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeec
Q 004835          269 GDSDCFVLEHVKHDRPEVLKK-------------------EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSC  329 (728)
Q Consensus       269 ~~~~~LV~E~~~~~~l~~l~~-------------------~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~  329 (728)
                      +...++||||++++++..+.+                   .+++..++.++.||+.||.|||++|||||||||+||||+ 
T Consensus        90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~-  168 (299)
T d1ywna1          90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-  168 (299)
T ss_dssp             TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-
T ss_pred             CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeEC-
Confidence            456899999999999877652                   278899999999999999999999999999999999999 


Q ss_pred             CCCceEEEeeecccc
Q 004835          330 KAVKGYLIDFNLAMV  344 (728)
Q Consensus       330 ~~~~~kL~DFGlA~~  344 (728)
                      +++.+||+|||+|+.
T Consensus       169 ~~~~~Kl~DFGla~~  183 (299)
T d1ywna1         169 EKNVVKICDFGLARD  183 (299)
T ss_dssp             GGGCEEECC------
T ss_pred             CCCcEEEccCcchhh
Confidence            667899999999975


No 51 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-45  Score=391.61  Aligned_cols=141  Identities=20%  Similarity=0.256  Sum_probs=119.5

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCe----EEEEEeccCc---CchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeE
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGT----VVAIKCPHAN---ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDC  273 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~----~VAIK~i~~~---~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~  273 (728)
                      ++|+++++||+|+||+||+|++..+|+    .||+|.+...   ...+.+.+|+.++++++||| |+++++++.++ ..+
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~Hpn-Iv~l~g~~~~~-~~~   86 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH-VCRLLGICLTS-TVQ   86 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTT-BCCEEEEEESS-SEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCC-EeeEEEEEecC-Cee
Confidence            579999999999999999999988776    5888887643   34567899999999999999 99999999865 567


Q ss_pred             EEEeccCCCChHHHh-h---cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          274 FVLEHVKHDRPEVLK-K---EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       274 LV~E~~~~~~l~~l~-~---~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      +++||+.++.+.... .   .+++..++.|+.||+.||+|||++|||||||||+||||+ .++.+||+|||+|+.
T Consensus        87 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~-~~~~~kl~DFGla~~  160 (317)
T d1xkka_          87 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK-TPQHVKITDFGLAKL  160 (317)
T ss_dssp             EEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE-ETTEEEECCCSHHHH
T ss_pred             EEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeC-CCCCeEeecccccee
Confidence            778888877665443 2   388999999999999999999999999999999999999 667899999999985


No 52 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=3.7e-45  Score=385.65  Aligned_cols=145  Identities=25%  Similarity=0.393  Sum_probs=129.6

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEeccC
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK  280 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E~~~  280 (728)
                      ++|++++.||+|+||+||+|++..+|+.||||++........+.+|+++++.+.|+++|+.+.+++..++..++||||++
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~   86 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG   86 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC
Confidence            47999999999999999999999999999999988766666788999999999999988888888899999999999998


Q ss_pred             CCChHHHh---hcCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeec--CCCceEEEeeeccccc
Q 004835          281 HDRPEVLK---KEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSC--KAVKGYLIDFNLAMVG  345 (728)
Q Consensus       281 ~~~l~~l~---~~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~--~~~~~kL~DFGlA~~~  345 (728)
                      +++...+.   +.+++..+..++.|++.||+|||++|||||||||+|||++.  .+..++|+|||+|+..
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~  156 (299)
T d1ckia_          87 PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  156 (299)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEEC
T ss_pred             CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceec
Confidence            87666554   34999999999999999999999999999999999999863  3457999999999863


No 53 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=5.5e-45  Score=385.63  Aligned_cols=143  Identities=22%  Similarity=0.335  Sum_probs=127.7

Q ss_pred             CCCeeEEEEecccCceEEEEEEEc-----CCCeEEEEEeccCcCc---hhHHHHHHHHHHhcCCCCceEEecceEEeCCe
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRK-----NDGTVVAIKCPHANAS---KHYVSNELRMLERFGGKNFIIKYEGCFKCGDS  271 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~-----~~g~~VAIK~i~~~~~---~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~  271 (728)
                      .++|++++.||+|+||+||+|+++     .+++.||||++.....   ..++.+|+.+|++++|+| |+++++++...+.
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~n-iv~~~~~~~~~~~   90 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN-IVKLLGVCAVGKP   90 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTT-BCCEEEEECSSSS
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCC-cccceeeeccCCc
Confidence            468999999999999999999985     3568999999875432   356889999999999999 9999999999999


Q ss_pred             eEEEEeccCCCChHHHhh---------------------------cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCc
Q 004835          272 DCFVLEHVKHDRPEVLKK---------------------------EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGN  324 (728)
Q Consensus       272 ~~LV~E~~~~~~l~~l~~---------------------------~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeN  324 (728)
                      .++||||+.++++..+..                           .+++..+..|+.||+.||+|||+++||||||||+|
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~N  170 (301)
T d1lufa_          91 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRN  170 (301)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             eEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccc
Confidence            999999999998877653                           26788999999999999999999999999999999


Q ss_pred             eEeecCCCceEEEeeecccc
Q 004835          325 FLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       325 ILld~~~~~~kL~DFGlA~~  344 (728)
                      |||+ .++.+||+|||+|+.
T Consensus       171 ILld-~~~~~Kl~DFGls~~  189 (301)
T d1lufa_         171 CLVG-ENMVVKIADFGLSRN  189 (301)
T ss_dssp             EEEC-GGGCEEECCCSCHHH
T ss_pred             eEEC-CCCcEEEccchhhee
Confidence            9999 667899999999975


No 54 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.7e-45  Score=387.08  Aligned_cols=145  Identities=23%  Similarity=0.323  Sum_probs=127.0

Q ss_pred             CCCCCeeEEEEecccCceEEEEEEEcCCCe--EEEEEeccCc---CchhHHHHHHHHHHhc-CCCCceEEecceEEeCCe
Q 004835          198 PNFESFIVEEEEGSGGYGTVYRARRKNDGT--VVAIKCPHAN---ASKHYVSNELRMLERF-GGKNFIIKYEGCFKCGDS  271 (728)
Q Consensus       198 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~--~VAIK~i~~~---~~~~~~~~Ei~iL~~L-~h~n~Ivkl~~~~~~~~~  271 (728)
                      .++++|++.++||+|+||+||+|+++.+|.  .||||.+...   ...+.+.+|+.+|.++ +|+| |+++++++..++.
T Consensus         7 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~Hpn-Iv~~~~~~~~~~~   85 (309)
T d1fvra_           7 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN-IINLLGACEHRGY   85 (309)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTT-BCCEEEEEEETTE
T ss_pred             cCHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCC-EeeEEEEEecCCe
Confidence            356899999999999999999999988876  4777876532   2345688999999999 6888 9999999999999


Q ss_pred             eEEEEeccCCCChHHHhh-------------------cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCC
Q 004835          272 DCFVLEHVKHDRPEVLKK-------------------EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV  332 (728)
Q Consensus       272 ~~LV~E~~~~~~l~~l~~-------------------~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~  332 (728)
                      .|+||||+++|.+..++.                   .+++..+..++.||+.||.|||+++||||||||+|||++ .++
T Consensus        86 ~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~-~~~  164 (309)
T d1fvra_          86 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG-ENY  164 (309)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-GGG
T ss_pred             eEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEc-CCC
Confidence            999999999999877652                   378999999999999999999999999999999999999 667


Q ss_pred             ceEEEeeecccc
Q 004835          333 KGYLIDFNLAMV  344 (728)
Q Consensus       333 ~~kL~DFGlA~~  344 (728)
                      .+||+|||+|+.
T Consensus       165 ~~kl~DfG~a~~  176 (309)
T d1fvra_         165 VAKIADFGLSRG  176 (309)
T ss_dssp             CEEECCTTCEES
T ss_pred             ceEEcccccccc
Confidence            899999999974


No 55 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-44  Score=378.61  Aligned_cols=147  Identities=21%  Similarity=0.254  Sum_probs=122.7

Q ss_pred             cCCCCCCeeEEEEecccCceEEEEEEEcCCC-------eEEEEEeccCcCc---hhHHHHHHHHHHhc-CCCCceEEecc
Q 004835          196 VLPNFESFIVEEEEGSGGYGTVYRARRKNDG-------TVVAIKCPHANAS---KHYVSNELRMLERF-GGKNFIIKYEG  264 (728)
Q Consensus       196 ~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~~g-------~~VAIK~i~~~~~---~~~~~~Ei~iL~~L-~h~n~Ivkl~~  264 (728)
                      +....++|++++.||+|+||.||+|++..++       ..||||+++....   ...+.+|...+.++ +|+| |+++++
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~Hpn-Iv~~~~   86 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN-IINLLG   86 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTT-BCCEEE
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCe-EEeccc
Confidence            3344579999999999999999999976544       4799999976543   34577899999888 6887 999999


Q ss_pred             eEEeCCeeEEEEeccCCCChHHHhh-------------------cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCce
Q 004835          265 CFKCGDSDCFVLEHVKHDRPEVLKK-------------------EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNF  325 (728)
Q Consensus       265 ~~~~~~~~~LV~E~~~~~~l~~l~~-------------------~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNI  325 (728)
                      ++.+++..|+||||+.+|.+..++.                   .+++..++.++.||+.||+|||+++||||||||+||
T Consensus        87 ~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~Ni  166 (299)
T d1fgka_          87 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  166 (299)
T ss_dssp             EECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             ccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccce
Confidence            9999999999999999999877652                   378999999999999999999999999999999999


Q ss_pred             EeecCCCceEEEeeecccc
Q 004835          326 LFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       326 Lld~~~~~~kL~DFGlA~~  344 (728)
                      |++ .++.+||+|||+++.
T Consensus       167 Ll~-~~~~~kl~dfg~~~~  184 (299)
T d1fgka_         167 LVT-EDNVMKIADFGLARD  184 (299)
T ss_dssp             EEC-TTCCEEECSTTCCCC
T ss_pred             eec-CCCCeEeccchhhcc
Confidence            999 667899999999975


No 56 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-44  Score=377.41  Aligned_cols=143  Identities=20%  Similarity=0.271  Sum_probs=117.0

Q ss_pred             CCCCeeEEEEecccCceEEEEEEEcCC-C--eEEEEEeccCc-----CchhHHHHHHHHHHhcCCCCceEEecceEEeCC
Q 004835          199 NFESFIVEEEEGSGGYGTVYRARRKND-G--TVVAIKCPHAN-----ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGD  270 (728)
Q Consensus       199 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~-g--~~VAIK~i~~~-----~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~  270 (728)
                      +.++|++.+.||+|+||.||+|++..+ +  ..||||++...     ...+.+.+|+.+|++++|+| |+++++++.+ .
T Consensus         6 ~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~n-Iv~~~g~~~~-~   83 (273)
T d1u46a_           6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN-LIRLYGVVLT-P   83 (273)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTT-BCCEEEEECS-S
T ss_pred             chHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCC-EEEEEEEEee-c
Confidence            346899999999999999999987533 3  47899998643     12356889999999999999 9999999975 5


Q ss_pred             eeEEEEeccCCCChHHHh----hcCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          271 SDCFVLEHVKHDRPEVLK----KEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       271 ~~~LV~E~~~~~~l~~l~----~~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      ..++||||+.++.+....    ..+++..++.++.||+.||.|||++||+||||||+||||+ .++.+||+|||+++.
T Consensus        84 ~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~-~~~~vkl~DfGl~~~  160 (273)
T d1u46a_          84 PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA-TRDLVKIGDFGLMRA  160 (273)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE-ETTEEEECCCTTCEE
T ss_pred             chheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccc-cccceeeccchhhhh
Confidence            779999999988876543    2499999999999999999999999999999999999999 567899999999985


No 57 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-44  Score=381.78  Aligned_cols=149  Identities=21%  Similarity=0.279  Sum_probs=130.7

Q ss_pred             cccCCCCCCeeEEEEecccCceEEEEEEEcC-----CCeEEEEEeccCcCch---hHHHHHHHHHHhcCCCCceEEecce
Q 004835          194 AKVLPNFESFIVEEEEGSGGYGTVYRARRKN-----DGTVVAIKCPHANASK---HYVSNELRMLERFGGKNFIIKYEGC  265 (728)
Q Consensus       194 ~~~~~~~~~y~i~~~LG~G~fG~Vy~a~~~~-----~g~~VAIK~i~~~~~~---~~~~~Ei~iL~~L~h~n~Ivkl~~~  265 (728)
                      +++....++|++.+.||+|+||+||+|.+..     +++.||||+++.....   ..+.+|+.++++++|+| |++++++
T Consensus        13 ~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~n-Iv~~~~~   91 (308)
T d1p4oa_          13 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLLGV   91 (308)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTT-BCCEEEE
T ss_pred             cceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCC-EeeeeeE
Confidence            4456667899999999999999999998852     3578999999754332   35789999999999999 9999999


Q ss_pred             EEeCCeeEEEEeccCCCChHHHhh-------------cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCC
Q 004835          266 FKCGDSDCFVLEHVKHDRPEVLKK-------------EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAV  332 (728)
Q Consensus       266 ~~~~~~~~LV~E~~~~~~l~~l~~-------------~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~  332 (728)
                      +...+..++||||+.+|++..+..             .+++..+..++.|++.||.|||+++|+||||||+||||+ .++
T Consensus        92 ~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld-~~~  170 (308)
T d1p4oa_          92 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA-EDF  170 (308)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC-TTC
T ss_pred             EecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeec-CCc
Confidence            999999999999999998877642             157888999999999999999999999999999999999 777


Q ss_pred             ceEEEeeecccc
Q 004835          333 KGYLIDFNLAMV  344 (728)
Q Consensus       333 ~~kL~DFGlA~~  344 (728)
                      .+||+|||+|+.
T Consensus       171 ~~Kl~DFGla~~  182 (308)
T d1p4oa_         171 TVKIGDFGMTRD  182 (308)
T ss_dssp             CEEECCTTCCCG
T ss_pred             eEEEeeccccee
Confidence            899999999975


No 58 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=7e-44  Score=384.19  Aligned_cols=293  Identities=22%  Similarity=0.312  Sum_probs=217.2

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcC-chhHHHHHHHHHHhcCCCC----------ceEEecceEEe-
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANA-SKHYVSNELRMLERFGGKN----------FIIKYEGCFKC-  268 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~-~~~~~~~Ei~iL~~L~h~n----------~Ivkl~~~~~~-  268 (728)
                      ++|+++++||+|+||+||+|++..+|+.||||+++... ..+.+.+|+.+++.+.|++          +|+++++++.. 
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            35999999999999999999999999999999997653 3456778999998887532          38888888754 


Q ss_pred             -CCeeEEEEeccCCCChHH--Hh----hcCChHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCceEeecCCC-----ceE
Q 004835          269 -GDSDCFVLEHVKHDRPEV--LK----KEIDLSQLQWYGYCLFRALASLHK-QGIVHRDVKPGNFLFSCKAV-----KGY  335 (728)
Q Consensus       269 -~~~~~LV~E~~~~~~l~~--l~----~~l~~~~~~~i~~QIl~aL~yLHs-~gIIHRDIKPeNILld~~~~-----~~k  335 (728)
                       ....+++|+++.......  ..    ..+++..++.++.||+.||.|||+ +||+||||||+||||+.++.     .++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~k  172 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK  172 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceee
Confidence             356677777766543221  11    238889999999999999999998 89999999999999984432     478


Q ss_pred             EEeeeccccccCCCCccccCCCCcCCCCCCCCCCCCcccccccccccccCCCCCccccchhhhhccccccCCCccccccc
Q 004835          336 LIDFNLAMVGFDGSFNQATLPGTKYVPPVNGRKVPSAKSLVAVKQDTRKGSNLEPKDLKRKVVRQTNVHNDLGSRNIINS  415 (728)
Q Consensus       336 L~DFGlA~~~~~~~~~~~~~~~t~yipPe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~  415 (728)
                      |+|||.|.....                                                                    
T Consensus       173 l~dfg~s~~~~~--------------------------------------------------------------------  184 (362)
T d1q8ya_         173 IADLGNACWYDE--------------------------------------------------------------------  184 (362)
T ss_dssp             ECCCTTCEETTB--------------------------------------------------------------------
T ss_pred             Eeeccccccccc--------------------------------------------------------------------
Confidence            899988763100                                                                    


Q ss_pred             CCCCCCCccccccccccCCcccccCCCCCccchhHHHHHHHhhhcCCCCCCCCCCCCccccccCCCCCCCccccccCCCC
Q 004835          416 QGADGSGITSAKEATSTRTPAERLREPLPCQGRKELISLLQKALRNPNYEASDCPAPRRKRVVAPPGKVGKELVYITPMP  495 (728)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~  495 (728)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (362)
T d1q8ya_         185 --------------------------------------------------------------------------------  184 (362)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCcccccCCCCCCCCCCchhHHHHHhhcCCCCchhhhhhhhccCCCCCCCCCCcCCCCcccchhhhccCCCCCchhH
Q 004835          496 LHSNGIAVAGAGLMNKGPSDLSDLQILLLTKLHPVPVLIIFYLLLGNGKQKKDGPCAGTKGFRAPEVLFRSQHQGPKLDI  575 (728)
Q Consensus       496 ~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~~DI  575 (728)
                                                                         .....+||+.|+|||++.+.. ++.++||
T Consensus       185 ---------------------------------------------------~~~~~~gt~~y~aPE~~~~~~-~~~~~Di  212 (362)
T d1q8ya_         185 ---------------------------------------------------HYTNSIQTREYRSPEVLLGAP-WGCGADI  212 (362)
T ss_dssp             ---------------------------------------------------CCCSCCSCGGGCCHHHHHTCC-CCTHHHH
T ss_pred             ---------------------------------------------------ccccccccccccChhhccccC-CCccccc
Confidence                                                               001346899999999997654 6999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCC-------hHHHHHHHHHhCCchHHHHHHhccCCCCCcchhhcccCCCCCCchhhhhhhc
Q 004835          576 WSAGVTLLYLMIGRTPFFGDP-------EQNIKDIAKLRGSEDLWEVAKLHNRESSFPEDLYAAKSLPPINLPEWCKLIT  648 (728)
Q Consensus       576 WSlG~il~eLltG~~PF~~~~-------~~~l~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (728)
                      ||+||++++|++|+.||....       ...+..++..+|............. ..+.........+.......+.....
T Consensus       213 wSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (362)
T d1q8ya_         213 WSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYT-RTFFNSRGLLRNISKLKFWPLEDVLT  291 (362)
T ss_dssp             HHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTH-HHHBCC--CBSSCCCCCBCCHHHHHH
T ss_pred             cchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhccccc-ccccccchhhhccccccCCchhhhcc
Confidence            999999999999999997543       2457777888887544333221111 11111112223344444555666666


Q ss_pred             cCCcccccCchhHHHHHHHhcccCCCCCCCHHHHhcCCCCccchhc
Q 004835          649 KRPDFLEVIPSSLFDLVDKCLTVNPRLRISAEDALKHEFFAPCHEM  694 (728)
Q Consensus       649 ~~~~~~~~~~~~l~dLi~~~L~~dP~~Rpta~e~L~Hp~f~~~~~~  694 (728)
                      ....+....++.+.|||.+||.+||.+||||+|||+||||+++...
T Consensus       292 ~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~~~  337 (362)
T d1q8ya_         292 EKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGM  337 (362)
T ss_dssp             HTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTC
T ss_pred             cccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCCCc
Confidence            6677778889999999999999999999999999999999976533


No 59 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.8e-43  Score=374.36  Aligned_cols=148  Identities=22%  Similarity=0.303  Sum_probs=129.1

Q ss_pred             ccCCCCCCeeEEEEecccCceEEEEEEEc-----CCCeEEEEEeccCcCc---hhHHHHHHHHHHhc-CCCCceEEecce
Q 004835          195 KVLPNFESFIVEEEEGSGGYGTVYRARRK-----NDGTVVAIKCPHANAS---KHYVSNELRMLERF-GGKNFIIKYEGC  265 (728)
Q Consensus       195 ~~~~~~~~y~i~~~LG~G~fG~Vy~a~~~-----~~g~~VAIK~i~~~~~---~~~~~~Ei~iL~~L-~h~n~Ivkl~~~  265 (728)
                      .+....++|++.++||+|+||.||+|++.     .+++.||||+++....   ...+.+|+.++.++ +|+| |++++++
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~Hpn-Iv~~~g~   95 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN-IVNLLGA   95 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT-BCCEEEE
T ss_pred             cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCC-EEEEEEE
Confidence            34445579999999999999999999873     4568999999975432   34578999999999 5777 9999999


Q ss_pred             EEeCCeeEEEEeccCCCChHHHhh---------------------cCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCc
Q 004835          266 FKCGDSDCFVLEHVKHDRPEVLKK---------------------EIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGN  324 (728)
Q Consensus       266 ~~~~~~~~LV~E~~~~~~l~~l~~---------------------~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeN  324 (728)
                      +..+...|+||||++++++..+.+                     .+++..+..|+.||+.||+|||+++||||||||+|
T Consensus        96 ~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~N  175 (311)
T d1t46a_          96 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN  175 (311)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccc
Confidence            999999999999999998877643                     27889999999999999999999999999999999


Q ss_pred             eEeecCCCceEEEeeecccc
Q 004835          325 FLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       325 ILld~~~~~~kL~DFGlA~~  344 (728)
                      ||++ ..+.++|+|||+++.
T Consensus       176 Il~~-~~~~~ki~DfG~~~~  194 (311)
T d1t46a_         176 ILLT-HGRITKICDFGLARD  194 (311)
T ss_dssp             EEEE-TTTEEEECCCGGGSC
T ss_pred             cccc-ccCcccccccchhee
Confidence            9999 667899999999975


No 60 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=6.5e-43  Score=368.43  Aligned_cols=144  Identities=20%  Similarity=0.334  Sum_probs=128.4

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEeccC
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEHVK  280 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E~~~  280 (728)
                      ++|++++.||+|+||+||+|++..+|+.||||++........+.+|++++..+.|+++++.+++++..+...|+||||++
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~   84 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLG   84 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEecC
Confidence            58999999999999999999999999999999987766666788999999999997779999999999999999999997


Q ss_pred             CCChHHHh---hcCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeec----CCCceEEEeeecccc
Q 004835          281 HDRPEVLK---KEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSC----KAVKGYLIDFNLAMV  344 (728)
Q Consensus       281 ~~~l~~l~---~~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~----~~~~~kL~DFGlA~~  344 (728)
                      +++...+.   ..+++..+..++.|++.||.|||++|||||||||+||||+.    ..+.+||+|||+|+.
T Consensus        85 ~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_          85 PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             CCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEE
Confidence            65544443   24899999999999999999999999999999999999973    246799999999986


No 61 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-42  Score=370.44  Aligned_cols=139  Identities=21%  Similarity=0.273  Sum_probs=119.7

Q ss_pred             eEEEEecccCceEEEEEEEcCCC---eEEEEEeccCcC---chhHHHHHHHHHHhcCCCCceEEecceEEe-CCeeEEEE
Q 004835          204 IVEEEEGSGGYGTVYRARRKNDG---TVVAIKCPHANA---SKHYVSNELRMLERFGGKNFIIKYEGCFKC-GDSDCFVL  276 (728)
Q Consensus       204 ~i~~~LG~G~fG~Vy~a~~~~~g---~~VAIK~i~~~~---~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~-~~~~~LV~  276 (728)
                      .+.++||+|+||+||+|++..++   ..||||+++...   ..+.+.+|+.+|.+++|+| |+++++++.. ....++||
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~Hpn-Iv~~~g~~~~~~~~~~lv~  108 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN-VLSLLGICLRSEGSPLVVL  108 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTT-BCCCCEEEEETTTEEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCC-EeEEeEEEEecCCceEEEE
Confidence            44689999999999999987543   369999986432   2356899999999999999 9999998765 56899999


Q ss_pred             eccCCCChHHHhhc----CChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          277 EHVKHDRPEVLKKE----IDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       277 E~~~~~~l~~l~~~----l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      ||+.++++..+...    +++..+..++.|++.||.|||+.+|+||||||+||||+ +++.+||+|||+++.
T Consensus       109 E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~-~~~~~kL~DFG~~~~  179 (311)
T d1r0pa_         109 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARD  179 (311)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-TTCCEEECSSGGGCC
T ss_pred             EEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeEC-CCCCEEEecccchhh
Confidence            99999999876542    66788999999999999999999999999999999999 777899999999975


No 62 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.8e-43  Score=369.43  Aligned_cols=140  Identities=21%  Similarity=0.303  Sum_probs=119.1

Q ss_pred             CCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCchhH-HHHHHHHHHhcCCCCceEEecceEEeCC----eeEEE
Q 004835          201 ESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHY-VSNELRMLERFGGKNFIIKYEGCFKCGD----SDCFV  275 (728)
Q Consensus       201 ~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~-~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~----~~~LV  275 (728)
                      ..|.+.+.||+|+||+||+|++  +|+.||||+++....... ...|+..+..++|+| |+++++++...+    .+|+|
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~Hpn-Iv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN-ILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTT-BCCEEEEEEEECSSSEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCc-CcceEEEEEeCCCcceEEEEE
Confidence            3689999999999999999997  689999999875533222 234555556789999 999999987653    58999


Q ss_pred             EeccCCCChHHHhh--cCChHHHHHHHHHHHHHHHHHHh--------CCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          276 LEHVKHDRPEVLKK--EIDLSQLQWYGYCLFRALASLHK--------QGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       276 ~E~~~~~~l~~l~~--~l~~~~~~~i~~QIl~aL~yLHs--------~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      |||+.++++..+++  .+++..+..++.|++.||+|||+        +|||||||||+||||+ +++.+||+|||+++.
T Consensus        80 ~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~-~~~~~Kl~DFGl~~~  157 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-KNGTCCIADLGLAVR  157 (303)
T ss_dssp             EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEEC-TTSCEEECCCTTCEE
T ss_pred             EecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEc-CCCCeEEEecCcccc
Confidence            99999999987765  48899999999999999999996        5999999999999999 677899999999975


No 63 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.85  E-value=1.4e-21  Score=191.47  Aligned_cols=130  Identities=18%  Similarity=0.229  Sum_probs=104.7

Q ss_pred             eeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCc--------------------hhHHHHHHHHHHhcCCCCceEEe
Q 004835          203 FIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANAS--------------------KHYVSNELRMLERFGGKNFIIKY  262 (728)
Q Consensus       203 y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~--------------------~~~~~~Ei~iL~~L~h~n~Ivkl  262 (728)
                      +.+.++||+|+||+||+|++. +|+.||||+++....                    .....+|+..+.++.|.+ ++..
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-v~~~   79 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLA-VPKV   79 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSS-SCCE
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCC-cceE
Confidence            568999999999999999985 799999998753110                    122456888999999988 7666


Q ss_pred             cceEEeCCeeEEEEeccCCCChHHHhhcCChHHHHHHHHHHHHHHHHHHhCCcEeccCCCCceEeecCCCceEEEeeecc
Q 004835          263 EGCFKCGDSDCFVLEHVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLHKQGIVHRDVKPGNFLFSCKAVKGYLIDFNLA  342 (728)
Q Consensus       263 ~~~~~~~~~~~LV~E~~~~~~l~~l~~~l~~~~~~~i~~QIl~aL~yLHs~gIIHRDIKPeNILld~~~~~~kL~DFGlA  342 (728)
                      +++.    ..++||||+++....    .++...+..++.|++.||.|||++||+||||||+|||++ ++ .++|+|||+|
T Consensus        80 ~~~~----~~~lvme~~~~~~~~----~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~-~~-~~~liDFG~a  149 (191)
T d1zara2          80 YAWE----GNAVLMELIDAKELY----RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EE-GIWIIDFPQS  149 (191)
T ss_dssp             EEEE----TTEEEEECCCCEEGG----GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TT-EEEECCCTTC
T ss_pred             EEec----CCEEEEEeecccccc----chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee-CC-CEEEEECCCc
Confidence            5442    238999999986543    356667788999999999999999999999999999998 44 4899999999


Q ss_pred             cc
Q 004835          343 MV  344 (728)
Q Consensus       343 ~~  344 (728)
                      ..
T Consensus       150 ~~  151 (191)
T d1zara2         150 VE  151 (191)
T ss_dssp             EE
T ss_pred             cc
Confidence            75


No 64 
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.26  E-value=2.1e-06  Score=85.12  Aligned_cols=140  Identities=12%  Similarity=0.061  Sum_probs=92.3

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCc--CchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEe
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHAN--ASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLE  277 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~--~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E  277 (728)
                      ++.|++.+..+-++.+.||+...  ++..++||+....  .....+.+|..++..+...--+.+++.+...++..|+||+
T Consensus        13 ~~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~   90 (263)
T d1j7la_          13 IEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS   90 (263)
T ss_dssp             HTTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             hhceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEE
Confidence            34677777655555678998864  5677888886543  2344577899888877543226777888888899999999


Q ss_pred             ccCCCChHHHhhcCChHHHHHHHHHHHHHHHHHH----------------------------------------------
Q 004835          278 HVKHDRPEVLKKEIDLSQLQWYGYCLFRALASLH----------------------------------------------  311 (728)
Q Consensus       278 ~~~~~~l~~l~~~l~~~~~~~i~~QIl~aL~yLH----------------------------------------------  311 (728)
                      +++|..+.....  +......++.++...|+.||                                              
T Consensus        91 ~l~G~~~~~~~~--~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (263)
T d1j7la_          91 EADGVLCSEEYE--DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR  168 (263)
T ss_dssp             CCSSEEHHHHTT--TCSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHH
T ss_pred             eccccccccccc--ccccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHH
Confidence            999876533211  11111222333333333333                                              


Q ss_pred             -------hC------CcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          312 -------KQ------GIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       312 -------s~------gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                             ..      .++|+|+.|.|||++ ++...-|+||+.+..
T Consensus       169 ~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~-~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVK-DGKVSGFIDLGRSGR  213 (263)
T ss_dssp             HHHHHHHHSCCCCCEEEECSCCCTTSEEEE-TTEEEEECCCTTCEE
T ss_pred             HHHHHHHhcCCcCCcEEEEeeccCcceeec-CCceEEEeechhccc
Confidence                   11      279999999999998 555556999998875


No 65 
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=97.83  E-value=2.3e-05  Score=76.96  Aligned_cols=142  Identities=14%  Similarity=0.105  Sum_probs=86.6

Q ss_pred             CCCCeeEEEEecccC-ceEEEEEEEcCCCeEEEEEeccCcCchhHHHHHHHHHHhcCCCCc-eEEecceEEeCCeeEEEE
Q 004835          199 NFESFIVEEEEGSGG-YGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNF-IIKYEGCFKCGDSDCFVL  276 (728)
Q Consensus       199 ~~~~y~i~~~LG~G~-fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~Ei~iL~~L~h~n~-Ivkl~~~~~~~~~~~LV~  276 (728)
                      .+..+.+. .+..|. -+.||+... .++..+++|...... ...+..|...++.+..... +.+++.+..+++..++||
T Consensus         9 ~l~g~~~~-~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~-~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~   85 (255)
T d1nd4a_           9 RLFGYDWA-QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA-LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL   85 (255)
T ss_dssp             TTTTCEEE-ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT-TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred             hccCCceE-EcCCcccCCeEEEEEe-CCCCEEEEEeCCccC-HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEE
Confidence            34455554 344444 468999886 356778999765443 3446788888887765442 566777777888899999


Q ss_pred             eccCCCChHH-----------H---h---hcCC---------hHHHH-----HHH---------------HHHHHHHHHH
Q 004835          277 EHVKHDRPEV-----------L---K---KEID---------LSQLQ-----WYG---------------YCLFRALASL  310 (728)
Q Consensus       277 E~~~~~~l~~-----------l---~---~~l~---------~~~~~-----~i~---------------~QIl~aL~yL  310 (728)
                      ++++|..+..           +   .   +.++         .....     .+.               ......+..+
T Consensus        86 ~~i~G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  165 (255)
T d1nd4a_          86 GEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARL  165 (255)
T ss_dssp             ECCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHH
T ss_pred             EeeeccccccccccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHH
Confidence            9998743311           0   0   0010         00000     000               0012233344


Q ss_pred             HhC-------CcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          311 HKQ-------GIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       311 Hs~-------gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      ...       .++|+|+.|.|||++ ++..+-|+||+.+..
T Consensus       166 ~~~~~~~~~~~liHgD~~~~Nvl~~-~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         166 KARMPDGEDLVVTHGDACLPNIMVE-NGRFSGFIDCGRLGV  205 (255)
T ss_dssp             HHTCCSSCCEEEECSSCCGGGEEEE-TTEEEEECCCTTCEE
T ss_pred             HHhCCccCCceEEeCCCCCcceEEe-CCceEEEEEchhccc
Confidence            332       379999999999998 555567999999875


No 66 
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=97.49  E-value=0.00014  Score=77.10  Aligned_cols=75  Identities=17%  Similarity=0.161  Sum_probs=49.1

Q ss_pred             EEEecccCceEEEEEEEcCCCeEEEEEeccC------c---CchhHHHHHHHHHHhcCC--CCceEEecceEEeCCeeEE
Q 004835          206 EEEEGSGGYGTVYRARRKNDGTVVAIKCPHA------N---ASKHYVSNELRMLERFGG--KNFIIKYEGCFKCGDSDCF  274 (728)
Q Consensus       206 ~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~------~---~~~~~~~~Ei~iL~~L~h--~n~Ivkl~~~~~~~~~~~L  274 (728)
                      .+.||.|....||++....+++.|+||.-..      .   ....+...|..+|..+..  |..+++++.+  ++...++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            4568999999999999877788999996431      1   123456678888876642  2335555533  4566789


Q ss_pred             EEeccCCC
Q 004835          275 VLEHVKHD  282 (728)
Q Consensus       275 V~E~~~~~  282 (728)
                      |||++.+.
T Consensus       109 vmE~L~~~  116 (392)
T d2pula1         109 VMEDLSHL  116 (392)
T ss_dssp             EECCCTTS
T ss_pred             EEeccCCc
Confidence            99999764


No 67 
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=96.73  E-value=0.0014  Score=68.79  Aligned_cols=73  Identities=11%  Similarity=0.087  Sum_probs=53.0

Q ss_pred             EEEecccCceEEEEEEEcC-------CCeEEEEEeccCcCchhHHHHHHHHHHhcCCCCceEEecceEEeCCeeEEEEec
Q 004835          206 EEEEGSGGYGTVYRARRKN-------DGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCFKCGDSDCFVLEH  278 (728)
Q Consensus       206 ~~~LG~G~fG~Vy~a~~~~-------~g~~VAIK~i~~~~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~~~~~~~~LV~E~  278 (728)
                      ++.|+.|-.-.+|++....       ..+.|.+++.-.........+|..+++.+...++.+++++++..    .+|+||
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ef  122 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY  122 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEE
Confidence            3578888888999998753       24678888876433344456899999888766656778777642    689999


Q ss_pred             cCCC
Q 004835          279 VKHD  282 (728)
Q Consensus       279 ~~~~  282 (728)
                      +.|.
T Consensus       123 i~g~  126 (395)
T d1nw1a_         123 IPSR  126 (395)
T ss_dssp             CCEE
T ss_pred             eccc
Confidence            9874


No 68 
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.70  E-value=0.0015  Score=65.88  Aligned_cols=142  Identities=13%  Similarity=0.054  Sum_probs=76.2

Q ss_pred             CCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCchhHHHHHHHHHHhcCCCCceE-Eec----c--eEEeCCee
Q 004835          200 FESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFII-KYE----G--CFKCGDSD  272 (728)
Q Consensus       200 ~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~Ei~iL~~L~h~n~Iv-kl~----~--~~~~~~~~  272 (728)
                      ++...-.+.|..|---+.|+....  +..+++|+.........+..|+.++..|....+-+ ...    +  ...-....
T Consensus        17 lg~~~~~~~i~~G~~N~ny~v~t~--~g~yVLri~~~~~~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~   94 (316)
T d2ppqa1          17 VGSLTSYKGIAEGVENSNFLLHTT--KDPLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRP   94 (316)
T ss_dssp             CCCEEEEEEECC---EEEEEEEES--SCCEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEE
T ss_pred             CCCceEeecCCCCcccCeEEEEEC--CCcEEEEEcCCCCCHHHHHHHHHHHHhhhhccccccccceecCCCcceeeeccc
Confidence            344555566778888889999874  34589999876555566677888887776443111 111    1  11123455


Q ss_pred             EEEEeccCCCChH-----HH------h-------hc--------C------------------ChHHHHHHHHHHHHHHH
Q 004835          273 CFVLEHVKHDRPE-----VL------K-------KE--------I------------------DLSQLQWYGYCLFRALA  308 (728)
Q Consensus       273 ~LV~E~~~~~~l~-----~l------~-------~~--------l------------------~~~~~~~i~~QIl~aL~  308 (728)
                      +.++.++.+....     ..      .       ..        .                  ........+..+...+.
T Consensus        95 ~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  174 (316)
T d2ppqa1          95 AALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLA  174 (316)
T ss_dssp             EEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHH
T ss_pred             ceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhHHHHHHHHHHhhh
Confidence            6666666553211     00      0       00        0                  00111112222222222


Q ss_pred             HHHh----CCcEeccCCCCceEeecCCCceEEEeeecccc
Q 004835          309 SLHK----QGIVHRDVKPGNFLFSCKAVKGYLIDFNLAMV  344 (728)
Q Consensus       309 yLHs----~gIIHRDIKPeNILld~~~~~~kL~DFGlA~~  344 (728)
                      -.+.    .||||+|+.++||+++ ++...-|+||+.+..
T Consensus       175 ~~~~~~L~~giIHgDl~~dNvl~~-~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         175 AHWPKDLPAGVIHADLFQDNVFFL-GDELSGLIDFYFACN  213 (316)
T ss_dssp             HHCCCSSCEEEECSCCCGGGEEEE-TTEEEEECCCTTCEE
T ss_pred             ccCccccccccccCCcchhhhhcc-cccceeEeccccccc
Confidence            2222    4799999999999998 554457999999875


No 69 
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=96.57  E-value=0.0012  Score=67.64  Aligned_cols=67  Identities=10%  Similarity=0.072  Sum_probs=45.7

Q ss_pred             eEEEEEEEcCCCeEEEEEeccCcC-chhHHHHHHHHHHhcCCCCc-eEEec-----ceEEeCCeeEEEEeccCCC
Q 004835          215 GTVYRARRKNDGTVVAIKCPHANA-SKHYVSNELRMLERFGGKNF-IIKYE-----GCFKCGDSDCFVLEHVKHD  282 (728)
Q Consensus       215 G~Vy~a~~~~~g~~VAIK~i~~~~-~~~~~~~Ei~iL~~L~h~n~-Ivkl~-----~~~~~~~~~~LV~E~~~~~  282 (728)
                      -.||++.. .+|..|++|+.+... ..+++..|+..+..|..... ++...     ..+...+..+.|++++.|.
T Consensus        36 N~vy~v~~-~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~  109 (325)
T d1zyla1          36 NRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR  109 (325)
T ss_dssp             SEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred             ceeEEEEc-CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCc
Confidence            58999987 478899999987653 45678889988887754321 11111     1234566788999998863


No 70 
>d1lu0a_ g.3.2.1 (A:) Trypsin inhibitor {Squash (Cucurbita maxima) [TaxId: 3661]}
Probab=59.85  E-value=1.5  Score=27.53  Aligned_cols=15  Identities=40%  Similarity=0.873  Sum_probs=12.9

Q ss_pred             Ccccccccccccccc
Q 004835            2 MVPKTLMQCKFDSEL   16 (728)
Q Consensus         2 ~~~~~~~~~~~~~~~   16 (728)
                      +-|+.||+||-||.-
T Consensus         2 ~CPrIlm~Ck~DSDC   16 (29)
T d1lu0a_           2 VCPRILLECKKDSDC   16 (29)
T ss_dssp             CCCSCCCBCSSGGGS
T ss_pred             cCcHHHHHhcccccc
Confidence            569999999999973


No 71 
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=31.34  E-value=44  Score=32.73  Aligned_cols=138  Identities=17%  Similarity=0.170  Sum_probs=75.6

Q ss_pred             CCCCCeeEEEEecccCceEEEEEEEcCCCeEEEEEeccCcCchhHHHHHHHHHHhcCCCCceEEecceE-----------
Q 004835          198 PNFESFIVEEEEGSGGYGTVYRARRKNDGTVVAIKCPHANASKHYVSNELRMLERFGGKNFIIKYEGCF-----------  266 (728)
Q Consensus       198 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~g~~VAIK~i~~~~~~~~~~~Ei~iL~~L~h~n~Ivkl~~~~-----------  266 (728)
                      .+++.+.-++.=-.|+-|..|. ..  ++-.++||... ....+.+-.|+...-.+.-|. ...+..+-           
T Consensus        66 ~~l~~~K~i~~s~~Gs~Gv~FV-~~--e~gaiVlK~s~-tta~E~y~~eLAr~LGvpvPq-mRvI~~~~~E~~~~~~~~l  140 (342)
T d1cjaa_          66 KNLQQFKGIERSEKGTEGLFFV-ET--ESGVFIVKRST-NIESETFCSLLCMRLGLHAPK-VRVVSSNSEEGTNMLECLA  140 (342)
T ss_dssp             TCGGGEEEEEECCSTTSCEEEE-EE--SSCEEEEECCT-THHHHHHHHHHHHHHTCCCCC-EEEEESSSHHHHHHHHHHH
T ss_pred             hhHHhhhceEEeecCCceEEEE-Ec--CCceEEEecCC-chHHHHHHHHHHHHhCCCCCc-eEEecCCCHHHHHHHHHHh
Confidence            3456777777666677666554 33  46788999643 333344555666555666565 32222100           


Q ss_pred             -----------EeCCeeEEEEeccCCCChHHHhh-----cCChHHHHHHHHHHHHHH-HHHHhC---CcEeccC-CCCce
Q 004835          267 -----------KCGDSDCFVLEHVKHDRPEVLKK-----EIDLSQLQWYGYCLFRAL-ASLHKQ---GIVHRDV-KPGNF  325 (728)
Q Consensus       267 -----------~~~~~~~LV~E~~~~~~l~~l~~-----~l~~~~~~~i~~QIl~aL-~yLHs~---gIIHRDI-KPeNI  325 (728)
                                 .-....+++|||++|..+.....     .+....+..+.+  +-|+ .++|..   .+++|+- .++||
T Consensus       141 ~~~e~d~~I~sel~~A~~liMeYvpG~~l~e~~~~~a~~~fs~~~l~~LGk--IiaFDifInN~DR~PL~Wrn~GN~~Ni  218 (342)
T d1cjaa_         141 AIDKSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLGS--LMALDVIVNNSDRLPIAWTNEGNLDNI  218 (342)
T ss_dssp             HHCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHHH--HHHHHHHHTCCSSSCSSSCSCCCGGGE
T ss_pred             cCCChhHHHHHHHhcccceeeeccCCccccccccccchhhhcHHHHHHhhh--HHHHHHHHcCCccccccccCCCCccce
Confidence                       01234688999998766543322     133332222111  2222 245542   4677633 89999


Q ss_pred             EeecCCCceEEEeeecc
Q 004835          326 LFSCKAVKGYLIDFNLA  342 (728)
Q Consensus       326 Lld~~~~~~kL~DFGlA  342 (728)
                      +++.++..+..+|=|+.
T Consensus       219 ml~~n~~~~~~IDs~i~  235 (342)
T d1cjaa_         219 MLSERGATVVPIDSKII  235 (342)
T ss_dssp             EEESBTTCEEECSCCCC
T ss_pred             EEecCCcEEEEecCCcc
Confidence            99966656777775444


Done!