Query 004839
Match_columns 728
No_of_seqs 446 out of 3990
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 07:26:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004839.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004839hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xe4_A Oligopeptidase B; hydro 100.0 5.9E-77 2E-81 701.3 68.5 621 40-728 106-743 (751)
2 3iuj_A Prolyl endopeptidase; h 100.0 7.7E-77 2.6E-81 696.2 68.4 604 37-728 65-686 (693)
3 2xdw_A Prolyl endopeptidase; a 100.0 6.4E-71 2.2E-75 648.9 68.1 602 40-728 63-706 (710)
4 2bkl_A Prolyl endopeptidase; m 100.0 2.1E-70 7.2E-75 642.8 65.9 604 37-728 56-677 (695)
5 1yr2_A Prolyl oligopeptidase; 100.0 1.1E-69 3.9E-74 641.0 63.2 601 38-727 96-718 (741)
6 4hvt_A Ritya.17583.B, post-pro 100.0 5.1E-66 1.8E-70 594.7 62.1 611 40-728 59-708 (711)
7 3azo_A Aminopeptidase; POP fam 100.0 1.8E-49 6.3E-54 462.7 54.5 518 132-727 87-649 (662)
8 4a5s_A Dipeptidyl peptidase 4 100.0 3.6E-46 1.2E-50 440.3 50.2 526 125-727 113-726 (740)
9 2z3z_A Dipeptidyl aminopeptida 100.0 1.8E-43 6E-48 415.3 55.0 512 126-726 123-706 (706)
10 2ecf_A Dipeptidyl peptidase IV 100.0 2.9E-43 9.9E-48 415.7 53.3 517 125-727 153-740 (741)
11 3o4h_A Acylamino-acid-releasin 100.0 2.1E-43 7.3E-48 405.2 44.7 499 125-727 66-580 (582)
12 1z68_A Fibroblast activation p 100.0 5.8E-43 2E-47 411.8 47.7 523 126-727 112-719 (719)
13 1xfd_A DIP, dipeptidyl aminope 100.0 7.8E-43 2.7E-47 410.7 42.3 523 126-728 116-723 (723)
14 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 2.4E-24 8.2E-29 233.7 22.7 239 465-727 125-365 (386)
15 4ao6_A Esterase; hydrolase, th 99.9 7.6E-24 2.6E-28 216.4 20.3 217 465-727 28-259 (259)
16 1vlq_A Acetyl xylan esterase; 99.9 2.4E-23 8.3E-28 221.1 22.1 247 462-727 63-335 (337)
17 3f67_A Putative dienelactone h 99.9 9.4E-22 3.2E-26 197.5 22.3 225 464-725 3-241 (241)
18 1mpx_A Alpha-amino acid ester 99.9 5.4E-22 1.8E-26 227.3 21.8 255 462-727 20-355 (615)
19 3hxk_A Sugar hydrolase; alpha- 99.9 8.6E-22 2.9E-26 202.6 20.6 233 470-726 17-266 (276)
20 1l7a_A Cephalosporin C deacety 99.9 1.1E-21 3.7E-26 205.6 21.1 247 462-727 51-317 (318)
21 3bxp_A Putative lipase/esteras 99.9 5.6E-21 1.9E-25 196.6 24.7 233 466-726 3-271 (277)
22 3ga7_A Acetyl esterase; phosph 99.9 6.6E-21 2.2E-25 201.5 24.4 233 463-727 59-323 (326)
23 3doh_A Esterase; alpha-beta hy 99.9 3.1E-21 1E-25 208.7 22.1 221 465-725 142-378 (380)
24 2b9v_A Alpha-amino acid ester 99.9 1.9E-21 6.5E-26 223.5 20.9 251 463-727 33-367 (652)
25 3fcy_A Xylan esterase 1; alpha 99.9 6.4E-21 2.2E-25 203.2 22.3 244 462-724 77-343 (346)
26 3ebl_A Gibberellin receptor GI 99.9 3.2E-20 1.1E-24 199.2 26.2 243 462-727 59-352 (365)
27 3bjr_A Putative carboxylestera 99.9 2.5E-21 8.6E-26 200.1 15.7 234 465-725 17-282 (283)
28 2wtm_A EST1E; hydrolase; 1.60A 99.8 3.6E-20 1.2E-24 187.9 21.1 239 470-727 4-250 (251)
29 2hdw_A Hypothetical protein PA 99.8 3.2E-20 1.1E-24 199.1 21.8 247 462-726 63-367 (367)
30 2o7r_A CXE carboxylesterase; a 99.8 1E-20 3.6E-25 201.0 17.8 246 463-727 51-332 (338)
31 2i3d_A AGR_C_3351P, hypothetic 99.8 1.5E-19 5.2E-24 183.1 25.5 208 466-726 22-233 (249)
32 3qh4_A Esterase LIPW; structur 99.8 3.6E-20 1.2E-24 195.0 20.3 235 463-727 56-316 (317)
33 3ksr_A Putative serine hydrola 99.8 6.5E-21 2.2E-25 197.4 14.3 237 465-727 4-242 (290)
34 1zi8_A Carboxymethylenebutenol 99.8 2.5E-20 8.6E-25 186.4 17.8 210 470-727 6-233 (236)
35 3k2i_A Acyl-coenzyme A thioest 99.8 1.3E-19 4.6E-24 198.6 24.8 224 479-727 144-412 (422)
36 2o2g_A Dienelactone hydrolase; 99.8 5.5E-20 1.9E-24 182.0 18.4 216 463-727 8-223 (223)
37 3hlk_A Acyl-coenzyme A thioest 99.8 3.1E-19 1.1E-23 197.0 24.7 224 479-727 160-428 (446)
38 3i6y_A Esterase APC40077; lipa 99.8 1.6E-19 5.5E-24 186.1 19.8 242 465-727 15-279 (280)
39 2hm7_A Carboxylesterase; alpha 99.8 3.4E-19 1.2E-23 186.8 22.5 238 462-727 43-310 (310)
40 3trd_A Alpha/beta hydrolase; c 99.8 4.2E-19 1.4E-23 174.2 21.8 186 467-707 6-194 (208)
41 2zsh_A Probable gibberellin re 99.8 3.7E-19 1.3E-23 190.1 23.1 235 463-724 68-350 (351)
42 3ls2_A S-formylglutathione hyd 99.8 6.9E-20 2.4E-24 188.8 16.6 243 465-727 13-279 (280)
43 3fak_A Esterase/lipase, ESTE5; 99.8 2.5E-19 8.6E-24 189.0 20.7 234 463-727 55-309 (322)
44 3ain_A 303AA long hypothetical 99.8 1.3E-18 4.5E-23 183.5 26.2 236 462-727 60-321 (323)
45 3pfb_A Cinnamoyl esterase; alp 99.8 6E-19 2E-23 180.1 22.8 242 464-725 19-267 (270)
46 1lns_A X-prolyl dipeptidyl ami 99.8 1.8E-19 6.2E-24 210.1 21.0 237 473-727 179-522 (763)
47 3hju_A Monoglyceride lipase; a 99.8 2.3E-18 7.9E-23 182.5 27.2 237 471-726 39-312 (342)
48 1lzl_A Heroin esterase; alpha/ 99.8 7.5E-19 2.6E-23 185.4 23.3 247 463-727 47-317 (323)
49 2c7b_A Carboxylesterase, ESTE1 99.8 5.1E-19 1.7E-23 185.5 21.5 241 462-727 43-309 (311)
50 3fcx_A FGH, esterase D, S-form 99.8 1.6E-19 5.4E-24 186.1 17.0 242 466-727 15-281 (282)
51 2wir_A Pesta, alpha/beta hydro 99.8 4.6E-19 1.6E-23 186.1 20.6 237 462-727 46-312 (313)
52 3e4d_A Esterase D; S-formylglu 99.8 9.6E-19 3.3E-23 180.0 22.5 243 465-727 13-278 (278)
53 1jkm_A Brefeldin A esterase; s 99.8 1.3E-18 4.3E-23 186.7 23.2 246 463-726 78-358 (361)
54 2fuk_A XC6422 protein; A/B hyd 99.8 2.1E-18 7.3E-23 170.5 22.1 207 465-727 8-217 (220)
55 3pe6_A Monoglyceride lipase; a 99.8 7E-18 2.4E-22 174.2 26.4 238 471-727 21-295 (303)
56 3fnb_A Acylaminoacyl peptidase 99.8 1E-18 3.5E-23 190.5 21.1 242 465-727 133-402 (405)
57 3iii_A COCE/NOND family hydrol 99.8 7E-19 2.4E-23 197.4 19.9 240 463-726 37-320 (560)
58 4fbl_A LIPS lipolytic enzyme; 99.8 5.8E-19 2E-23 182.4 17.2 216 494-725 49-281 (281)
59 3k6k_A Esterase/lipase; alpha/ 99.8 2.9E-18 1E-22 180.8 22.9 233 462-727 55-309 (322)
60 4e15_A Kynurenine formamidase; 99.8 1.8E-19 6.2E-24 188.3 13.0 211 466-704 57-280 (303)
61 3llc_A Putative hydrolase; str 99.8 5.8E-18 2E-22 172.1 23.2 241 464-724 8-268 (270)
62 4b6g_A Putative esterase; hydr 99.8 1.9E-18 6.5E-23 178.4 17.2 242 466-727 21-283 (283)
63 1jfr_A Lipase; serine hydrolas 99.8 5.6E-18 1.9E-22 172.8 19.9 206 462-727 20-232 (262)
64 4h0c_A Phospholipase/carboxyle 99.8 1.4E-18 4.7E-23 171.1 14.2 186 493-723 19-209 (210)
65 3mve_A FRSA, UPF0255 protein V 99.8 4E-18 1.4E-22 186.0 19.2 239 464-727 165-414 (415)
66 3h04_A Uncharacterized protein 99.8 8.8E-18 3E-22 171.0 20.3 232 468-727 4-274 (275)
67 3vis_A Esterase; alpha/beta-hy 99.8 3.2E-18 1.1E-22 179.2 17.2 190 475-727 79-276 (306)
68 1jjf_A Xylanase Z, endo-1,4-be 99.8 1.8E-17 6.3E-22 169.7 21.7 219 463-725 28-260 (268)
69 4ezi_A Uncharacterized protein 99.8 1.4E-17 4.6E-22 178.3 21.1 253 462-727 38-371 (377)
70 1ufo_A Hypothetical protein TT 99.8 2.2E-17 7.5E-22 164.6 21.3 219 473-727 8-236 (238)
71 1jji_A Carboxylesterase; alpha 99.8 1.3E-17 4.3E-22 175.0 19.7 231 466-724 55-310 (311)
72 2pbl_A Putative esterase/lipas 99.8 3.1E-18 1.1E-22 174.5 14.6 200 469-707 40-246 (262)
73 2uz0_A Esterase, tributyrin es 99.8 1E-17 3.5E-22 170.5 17.8 238 465-727 5-257 (263)
74 1sfr_A Antigen 85-A; alpha/bet 99.8 3.6E-17 1.2E-21 171.0 21.9 245 465-728 7-285 (304)
75 3i2k_A Cocaine esterase; alpha 99.8 4.5E-18 1.5E-22 193.4 15.9 242 466-726 8-322 (587)
76 3og9_A Protein YAHD A copper i 99.7 2.8E-17 9.6E-22 161.5 17.2 190 484-725 8-208 (209)
77 3rm3_A MGLP, thermostable mono 99.7 2.5E-17 8.6E-22 168.1 17.0 216 495-727 39-270 (270)
78 4fhz_A Phospholipase/carboxyle 99.7 1.2E-17 4.2E-22 171.9 14.6 211 470-726 42-266 (285)
79 4f0j_A Probable hydrolytic enz 99.7 2.7E-16 9.2E-21 163.5 24.7 133 464-610 17-149 (315)
80 3d0k_A Putative poly(3-hydroxy 99.7 8.2E-17 2.8E-21 168.1 20.7 215 467-705 24-273 (304)
81 3g8y_A SUSD/RAGB-associated es 99.7 7.1E-18 2.4E-22 182.8 11.6 149 462-613 82-262 (391)
82 3d7r_A Esterase; alpha/beta fo 99.7 6.9E-17 2.4E-21 170.6 18.9 220 480-727 84-323 (326)
83 3bdi_A Uncharacterized protein 99.7 4.1E-16 1.4E-20 152.1 23.1 193 475-724 11-206 (207)
84 1r88_A MPT51/MPB51 antigen; AL 99.7 8.3E-17 2.8E-21 166.0 18.9 237 465-726 9-273 (280)
85 1fj2_A Protein (acyl protein t 99.7 1.3E-16 4.6E-21 158.7 19.5 202 484-727 14-229 (232)
86 3nuz_A Putative acetyl xylan e 99.7 1.1E-17 3.8E-22 181.6 12.1 149 462-613 87-267 (398)
87 2r8b_A AGR_C_4453P, uncharacte 99.7 6.6E-17 2.3E-21 163.5 17.0 182 494-727 60-249 (251)
88 3h2g_A Esterase; xanthomonas o 99.7 1.1E-16 3.8E-21 173.9 19.5 153 462-614 41-213 (397)
89 3cn9_A Carboxylesterase; alpha 99.7 3E-16 1E-20 155.9 21.1 191 492-726 20-226 (226)
90 1vkh_A Putative serine hydrola 99.7 1.9E-17 6.4E-22 170.0 12.6 195 493-707 38-259 (273)
91 3dkr_A Esterase D; alpha beta 99.7 6.2E-17 2.1E-21 162.4 16.0 217 494-725 20-248 (251)
92 1auo_A Carboxylesterase; hydro 99.7 1.8E-16 6.1E-21 156.1 18.9 191 494-727 12-218 (218)
93 1tht_A Thioesterase; 2.10A {Vi 99.7 1.9E-16 6.5E-21 165.4 19.8 222 467-707 7-245 (305)
94 3u0v_A Lysophospholipase-like 99.7 2.9E-16 9.8E-21 157.4 18.8 193 494-727 21-232 (239)
95 2qjw_A Uncharacterized protein 99.7 3.4E-16 1.1E-20 148.8 17.9 174 494-724 2-175 (176)
96 1k8q_A Triacylglycerol lipase, 99.7 2.8E-16 9.5E-21 168.3 18.0 147 464-612 24-185 (377)
97 2qm0_A BES; alpha-beta structu 99.7 6.5E-17 2.2E-21 166.4 12.3 216 462-705 13-259 (275)
98 3b5e_A MLL8374 protein; NP_108 99.7 1.5E-16 5.2E-21 157.7 13.8 199 476-726 14-217 (223)
99 2h1i_A Carboxylesterase; struc 99.7 5.1E-16 1.7E-20 154.1 17.6 183 494-726 36-226 (226)
100 2gop_A Trilobed protease; beta 99.7 4.5E-14 1.5E-18 149.6 33.2 248 126-418 61-339 (347)
101 3ia2_A Arylesterase; alpha-bet 99.7 8.1E-16 2.8E-20 157.1 18.7 222 471-723 2-270 (271)
102 1dqz_A 85C, protein (antigen 8 99.7 1.4E-15 4.9E-20 156.7 20.6 241 467-727 6-279 (280)
103 1gkl_A Endo-1,4-beta-xylanase 99.7 2.2E-15 7.6E-20 156.6 20.7 208 463-705 37-272 (297)
104 3r0v_A Alpha/beta hydrolase fo 99.7 2.2E-15 7.5E-20 152.4 19.9 200 471-704 6-246 (262)
105 2fx5_A Lipase; alpha-beta hydr 99.7 2.6E-15 9.1E-20 152.6 19.5 196 463-726 21-228 (258)
106 4fle_A Esterase; structural ge 99.7 5.1E-16 1.7E-20 151.6 13.4 186 497-725 3-192 (202)
107 1a8s_A Chloroperoxidase F; hal 99.7 7E-15 2.4E-19 150.3 22.3 118 472-609 3-121 (273)
108 2y6u_A Peroxisomal membrane pr 99.6 1.1E-15 3.9E-20 165.5 16.2 241 472-726 25-345 (398)
109 1a8q_A Bromoperoxidase A1; hal 99.6 2.7E-14 9.2E-19 146.0 25.6 118 472-609 3-121 (274)
110 3qit_A CURM TE, polyketide syn 99.6 3.7E-15 1.3E-19 152.1 18.6 122 475-612 11-132 (286)
111 3d59_A Platelet-activating fac 99.6 3.5E-15 1.2E-19 161.2 18.9 191 493-727 95-351 (383)
112 2qru_A Uncharacterized protein 99.6 1.1E-14 3.9E-19 149.4 21.6 226 472-724 9-273 (274)
113 1imj_A CIB, CCG1-interacting f 99.6 3E-15 1E-19 146.4 15.8 193 475-724 14-208 (210)
114 3dqz_A Alpha-hydroxynitrIle ly 99.6 5.1E-15 1.7E-19 149.4 17.8 210 497-726 5-258 (258)
115 1qlw_A Esterase; anisotropic r 99.6 7.1E-15 2.4E-19 155.2 19.4 200 479-726 49-321 (328)
116 3kxp_A Alpha-(N-acetylaminomet 99.6 1.1E-14 3.9E-19 152.0 20.7 219 475-723 55-313 (314)
117 3vdx_A Designed 16NM tetrahedr 99.6 3.3E-14 1.1E-18 157.1 25.0 229 469-726 5-280 (456)
118 1brt_A Bromoperoxidase A2; hal 99.6 2.3E-14 7.9E-19 147.1 21.4 220 474-723 9-276 (277)
119 1a88_A Chloroperoxidase L; hal 99.6 3.1E-14 1.1E-18 145.6 22.0 120 472-609 3-123 (275)
120 1zoi_A Esterase; alpha/beta hy 99.6 2.7E-14 9.2E-19 146.3 21.0 120 472-609 4-124 (276)
121 3fsg_A Alpha/beta superfamily 99.6 1.5E-14 5E-19 146.8 18.4 221 476-725 9-268 (272)
122 3i28_A Epoxide hydrolase 2; ar 99.6 1.1E-14 3.8E-19 164.5 19.2 127 466-610 236-362 (555)
123 3u1t_A DMMA haloalkane dehalog 99.6 1.2E-14 4E-19 150.6 17.6 222 476-726 17-297 (309)
124 3fob_A Bromoperoxidase; struct 99.6 1.1E-13 3.7E-18 142.4 23.5 117 473-609 12-129 (281)
125 3oos_A Alpha/beta hydrolase fa 99.6 6.5E-15 2.2E-19 149.8 14.2 205 475-706 10-263 (278)
126 2ocg_A Valacyclovir hydrolase; 99.6 1.1E-13 3.8E-18 139.8 23.1 208 475-706 9-238 (254)
127 3sty_A Methylketone synthase 1 99.6 5.8E-14 2E-18 142.3 21.1 211 494-724 10-265 (267)
128 2gzs_A IROE protein; enterobac 99.6 7.3E-15 2.5E-19 151.2 14.1 226 462-725 8-265 (278)
129 4dnp_A DAD2; alpha/beta hydrol 99.6 3.2E-15 1.1E-19 151.5 11.2 211 495-724 19-268 (269)
130 1tqh_A Carboxylesterase precur 99.6 5.2E-15 1.8E-19 149.4 12.4 207 496-724 16-244 (247)
131 3pe7_A Oligogalacturonate lyas 99.6 4.6E-13 1.6E-17 144.1 28.2 264 127-418 39-338 (388)
132 1mtz_A Proline iminopeptidase; 99.6 1.9E-14 6.4E-19 148.7 16.4 227 475-726 12-293 (293)
133 3c8d_A Enterochelin esterase; 99.6 1.6E-14 5.4E-19 156.6 16.2 222 465-726 166-398 (403)
134 2pl5_A Homoserine O-acetyltran 99.6 9.5E-14 3.3E-18 148.2 21.9 222 496-725 46-365 (366)
135 2r11_A Carboxylesterase NP; 26 99.6 1.7E-13 5.7E-18 142.7 23.2 228 468-723 46-305 (306)
136 1hkh_A Gamma lactamase; hydrol 99.6 5.4E-14 1.8E-18 144.2 19.1 102 497-610 24-126 (279)
137 2qs9_A Retinoblastoma-binding 99.6 1.5E-14 5.2E-19 140.0 14.0 179 495-726 3-186 (194)
138 3v48_A Aminohydrolase, putativ 99.6 4.5E-14 1.5E-18 144.3 17.9 210 495-726 14-261 (268)
139 3guu_A Lipase A; protein struc 99.6 1.1E-13 3.7E-18 150.2 21.8 244 464-726 72-406 (462)
140 1uxo_A YDEN protein; hydrolase 99.6 2.8E-14 9.5E-19 137.7 15.5 163 496-707 4-170 (192)
141 4f21_A Carboxylesterase/phosph 99.6 7.8E-14 2.7E-18 140.4 19.1 213 466-728 14-246 (246)
142 3i1i_A Homoserine O-acetyltran 99.6 4.4E-14 1.5E-18 151.1 18.4 143 466-610 11-183 (377)
143 2yys_A Proline iminopeptidase- 99.6 3.9E-14 1.3E-18 146.3 17.0 226 471-725 6-276 (286)
144 3qvm_A OLEI00960; structural g 99.6 3.4E-15 1.2E-19 152.3 8.5 211 497-725 29-278 (282)
145 3hss_A Putative bromoperoxidas 99.6 2.7E-14 9.3E-19 147.1 15.3 207 495-724 42-290 (293)
146 4g9e_A AHL-lactonase, alpha/be 99.6 1.9E-14 6.6E-19 146.5 14.0 232 468-725 4-269 (279)
147 2hqs_A Protein TOLB; TOLB, PAL 99.6 3.2E-12 1.1E-16 139.5 32.5 204 125-350 180-387 (415)
148 1q0r_A RDMC, aclacinomycin met 99.6 1.6E-13 5.3E-18 142.5 20.9 121 475-610 8-129 (298)
149 1iup_A META-cleavage product h 99.6 4.8E-14 1.6E-18 145.3 16.7 221 475-724 12-272 (282)
150 1j1i_A META cleavage compound 99.6 1.5E-13 5.2E-18 142.5 20.5 226 475-727 23-284 (296)
151 3e0x_A Lipase-esterase related 99.5 8E-14 2.7E-18 139.0 17.2 187 495-705 15-229 (245)
152 2puj_A 2-hydroxy-6-OXO-6-pheny 99.5 1.2E-13 4E-18 142.6 18.7 209 496-724 33-285 (286)
153 3om8_A Probable hydrolase; str 99.5 1.8E-13 6E-18 139.8 19.3 223 471-723 8-265 (266)
154 1wm1_A Proline iminopeptidase; 99.5 3.5E-13 1.2E-17 140.8 22.1 125 469-610 16-140 (317)
155 1c4x_A BPHD, protein (2-hydrox 99.5 1.6E-13 5.6E-18 141.3 18.4 227 472-724 11-284 (285)
156 3r40_A Fluoroacetate dehalogen 99.5 8.3E-14 2.8E-18 143.9 15.4 123 472-610 17-139 (306)
157 3p2m_A Possible hydrolase; alp 99.5 1.2E-13 4E-18 145.7 16.2 206 496-724 81-329 (330)
158 2xt0_A Haloalkane dehalogenase 99.5 5.6E-13 1.9E-17 138.5 21.0 118 478-610 33-150 (297)
159 1ycd_A Hypothetical 27.3 kDa p 99.5 8.2E-14 2.8E-18 140.0 14.0 203 495-726 4-238 (243)
160 3g9x_A Haloalkane dehalogenase 99.5 2E-13 6.9E-18 140.6 17.3 118 475-611 17-134 (299)
161 2xua_A PCAD, 3-oxoadipate ENOL 99.5 2.7E-13 9.2E-18 138.3 17.6 221 475-723 9-263 (266)
162 1b6g_A Haloalkane dehalogenase 99.5 6.2E-13 2.1E-17 139.1 20.7 118 478-610 34-151 (310)
163 1azw_A Proline iminopeptidase; 99.5 1.1E-12 3.9E-17 136.6 22.5 125 469-610 13-137 (313)
164 2hqs_A Protein TOLB; TOLB, PAL 99.5 1.6E-11 5.6E-16 133.8 32.5 251 132-417 140-395 (415)
165 1u2e_A 2-hydroxy-6-ketonona-2, 99.5 4.1E-13 1.4E-17 138.5 18.7 207 497-723 37-287 (289)
166 2qvb_A Haloalkane dehalogenase 99.5 1E-13 3.6E-18 142.6 13.5 121 474-611 14-135 (297)
167 3bdv_A Uncharacterized protein 99.5 7E-13 2.4E-17 127.8 18.3 171 495-726 16-188 (191)
168 3c5m_A Oligogalacturonate lyas 99.5 9.5E-13 3.3E-17 141.7 21.4 257 126-418 38-338 (396)
169 3nwo_A PIP, proline iminopepti 99.5 2.9E-13 1E-17 142.8 16.2 126 475-610 35-161 (330)
170 2e3j_A Epoxide hydrolase EPHB; 99.5 6.2E-13 2.1E-17 141.9 18.9 122 475-610 10-131 (356)
171 2vat_A Acetyl-COA--deacetylcep 99.5 1.9E-13 6.4E-18 150.7 14.7 143 467-611 78-236 (444)
172 2b61_A Homoserine O-acetyltran 99.5 2.2E-13 7.4E-18 146.1 14.6 144 466-611 24-190 (377)
173 2cjp_A Epoxide hydrolase; HET: 99.5 5.8E-13 2E-17 140.1 17.6 121 474-608 17-137 (328)
174 2wue_A 2-hydroxy-6-OXO-6-pheny 99.5 6.9E-13 2.4E-17 137.3 17.8 224 474-723 19-288 (291)
175 1mj5_A 1,3,4,6-tetrachloro-1,4 99.5 1.9E-13 6.7E-18 141.2 13.5 122 473-611 14-136 (302)
176 1xkl_A SABP2, salicylic acid-b 99.5 6.9E-13 2.4E-17 135.9 17.2 104 496-609 4-107 (273)
177 2wfl_A Polyneuridine-aldehyde 99.5 7.6E-13 2.6E-17 134.8 16.9 105 495-609 9-113 (264)
178 3bwx_A Alpha/beta hydrolase; Y 99.5 8.9E-13 3E-17 135.6 17.3 123 469-607 7-129 (285)
179 1qe3_A PNB esterase, para-nitr 99.5 1.8E-14 6.1E-19 159.8 4.7 221 474-707 79-316 (489)
180 3kda_A CFTR inhibitory factor 99.5 3.6E-13 1.2E-17 139.1 14.0 115 475-610 17-132 (301)
181 2xmz_A Hydrolase, alpha/beta h 99.5 5.9E-13 2E-17 135.8 15.3 104 496-611 16-119 (269)
182 2rau_A Putative esterase; NP_3 99.5 3.3E-13 1.1E-17 143.6 13.4 113 494-609 48-179 (354)
183 3bf7_A Esterase YBFF; thioeste 99.4 4.3E-13 1.5E-17 135.8 13.0 205 496-725 16-255 (255)
184 3c6x_A Hydroxynitrilase; atomi 99.4 1.4E-12 4.7E-17 132.3 16.5 103 497-609 4-106 (257)
185 1isp_A Lipase; alpha/beta hydr 99.4 1.2E-12 4.2E-17 124.9 15.0 169 496-725 3-176 (181)
186 1wom_A RSBQ, sigma factor SIGB 99.4 6.4E-13 2.2E-17 135.8 13.8 211 497-726 21-271 (271)
187 3fla_A RIFR; alpha-beta hydrol 99.4 1.5E-12 5.2E-17 131.9 16.3 208 494-725 18-249 (267)
188 2ecf_A Dipeptidyl peptidase IV 99.4 1.9E-11 6.6E-16 143.5 27.8 253 125-416 110-422 (741)
189 3afi_E Haloalkane dehalogenase 99.4 2.8E-12 9.5E-17 134.4 18.5 114 476-608 15-128 (316)
190 2q0x_A Protein DUF1749, unchar 99.4 6.3E-12 2.2E-16 132.9 20.4 127 465-611 13-146 (335)
191 3pe7_A Oligogalacturonate lyas 99.4 3.3E-11 1.1E-15 129.4 25.1 216 127-349 128-383 (388)
192 3gff_A IROE-like serine hydrol 99.4 4.9E-13 1.7E-17 140.4 9.8 227 463-725 8-265 (331)
193 3pic_A CIP2; alpha/beta hydrol 99.4 1.1E-11 3.8E-16 128.3 19.6 117 478-611 90-220 (375)
194 2xdw_A Prolyl endopeptidase; a 99.4 8.5E-11 2.9E-15 137.4 28.9 258 132-411 80-370 (710)
195 1m33_A BIOH protein; alpha-bet 99.4 1.4E-12 4.9E-17 131.9 12.1 95 497-609 13-108 (258)
196 1pja_A Palmitoyl-protein thioe 99.4 2.4E-12 8.1E-17 133.6 13.8 104 494-611 34-140 (302)
197 1ehy_A Protein (soluble epoxid 99.4 2.9E-11 9.9E-16 125.1 21.8 118 475-609 16-133 (294)
198 4a5s_A Dipeptidyl peptidase 4 99.4 2.6E-11 8.8E-16 142.5 24.1 211 128-350 175-449 (740)
199 4g4g_A 4-O-methyl-glucuronoyl 99.4 1.8E-11 6.1E-16 128.0 19.6 115 479-611 124-254 (433)
200 4fol_A FGH, S-formylglutathion 99.4 4.5E-12 1.5E-16 130.9 14.9 245 465-728 12-298 (299)
201 3b12_A Fluoroacetate dehalogen 99.1 4.7E-14 1.6E-18 145.6 0.0 121 475-611 12-132 (304)
202 1r3d_A Conserved hypothetical 99.4 7.6E-12 2.6E-16 127.3 16.2 104 496-610 16-122 (264)
203 2gop_A Trilobed protease; beta 99.4 3.4E-10 1.2E-14 119.5 29.2 200 125-347 16-250 (347)
204 2ojh_A Uncharacterized protein 99.4 1.6E-10 5.5E-15 118.0 25.8 202 125-351 43-259 (297)
205 2qmq_A Protein NDRG2, protein 99.4 3.8E-12 1.3E-16 130.7 13.4 123 476-610 19-146 (286)
206 3qmv_A Thioesterase, REDJ; alp 99.4 5E-13 1.7E-17 137.2 6.7 221 465-707 13-264 (280)
207 2psd_A Renilla-luciferin 2-mon 99.3 8.9E-12 3E-16 130.7 15.7 116 475-608 28-144 (318)
208 3c5m_A Oligogalacturonate lyas 99.3 5.3E-11 1.8E-15 127.9 21.0 257 128-416 85-391 (396)
209 3ibt_A 1H-3-hydroxy-4-oxoquino 99.3 1.3E-11 4.6E-16 124.6 15.1 116 476-610 7-123 (264)
210 3l80_A Putative uncharacterize 99.3 1.8E-12 6.2E-17 133.5 7.7 103 496-609 41-144 (292)
211 3azo_A Aminopeptidase; POP fam 99.3 3.4E-10 1.2E-14 131.0 27.5 210 124-351 130-370 (662)
212 1yr2_A Prolyl oligopeptidase; 99.3 4.7E-10 1.6E-14 131.8 28.3 260 131-415 114-401 (741)
213 2bkl_A Prolyl endopeptidase; m 99.3 3.9E-10 1.3E-14 131.4 26.9 207 131-351 75-305 (695)
214 3s25_A Hypothetical 7-bladed b 99.3 3.1E-09 1.1E-13 109.9 30.5 225 57-350 22-255 (302)
215 1xfd_A DIP, dipeptidyl aminope 99.3 2.1E-10 7.2E-15 134.1 24.4 258 126-410 63-396 (723)
216 4i19_A Epoxide hydrolase; stru 99.3 6.8E-11 2.3E-15 127.4 18.6 122 474-610 74-204 (388)
217 2z3z_A Dipeptidyl aminopeptida 99.3 5.3E-10 1.8E-14 130.5 26.8 211 126-350 183-435 (706)
218 1z68_A Fibroblast activation p 99.3 8.6E-11 3E-15 137.5 19.8 268 105-410 46-394 (719)
219 2d81_A PHB depolymerase; alpha 99.3 9.9E-12 3.4E-16 129.1 9.8 148 570-726 6-176 (318)
220 1ukc_A ESTA, esterase; fungi, 99.2 3.2E-12 1.1E-16 142.7 5.3 223 474-706 82-327 (522)
221 3s25_A Hypothetical 7-bladed b 99.2 1.8E-09 6.3E-14 111.6 24.0 182 130-349 110-292 (302)
222 2ojh_A Uncharacterized protein 99.2 3.1E-09 1.1E-13 108.3 24.8 234 148-417 20-266 (297)
223 2wj6_A 1H-3-hydroxy-4-oxoquina 99.2 2.6E-10 9E-15 116.8 15.9 117 475-609 11-128 (276)
224 3o4h_A Acylamino-acid-releasin 99.2 7.4E-10 2.5E-14 126.2 21.1 199 126-352 24-229 (582)
225 3iuj_A Prolyl endopeptidase; h 99.2 7.3E-09 2.5E-13 120.5 29.8 249 57-351 137-406 (693)
226 1thg_A Lipase; hydrolase(carbo 99.1 2.2E-11 7.5E-16 136.6 5.7 225 474-706 102-359 (544)
227 1l0q_A Surface layer protein; 99.1 3.8E-08 1.3E-12 105.4 30.2 242 126-413 34-279 (391)
228 2h7c_A Liver carboxylesterase 99.1 6.3E-11 2.1E-15 133.0 7.7 132 474-612 95-234 (542)
229 2xe4_A Oligopeptidase B; hydro 99.1 2.4E-08 8.1E-13 117.2 29.7 254 57-351 182-459 (751)
230 1l0q_A Surface layer protein; 99.1 1.2E-07 4E-12 101.6 32.8 198 125-351 75-276 (391)
231 3fle_A SE_1780 protein; struct 99.1 2.4E-09 8.3E-14 107.3 16.5 211 497-722 7-247 (249)
232 3ds8_A LIN2722 protein; unkonw 99.1 1.4E-09 4.9E-14 109.9 14.5 210 497-725 4-242 (254)
233 1k32_A Tricorn protease; prote 99.1 1.1E-07 3.6E-12 116.2 33.5 152 125-281 54-263 (1045)
234 2ogt_A Thermostable carboxyles 99.0 3.5E-10 1.2E-14 125.6 10.0 131 474-611 81-224 (498)
235 1llf_A Lipase 3; candida cylin 99.0 6.7E-11 2.3E-15 132.4 3.2 133 474-609 94-243 (534)
236 1gpl_A RP2 lipase; serine este 99.0 2.3E-10 8E-15 124.7 7.0 111 495-610 69-181 (432)
237 3vgz_A Uncharacterized protein 99.0 2E-07 6.9E-12 97.9 28.5 238 126-406 91-352 (353)
238 2ha2_A ACHE, acetylcholinester 99.0 3.3E-10 1.1E-14 127.2 6.8 132 474-610 93-232 (543)
239 1k32_A Tricorn protease; prote 99.0 2.6E-08 8.9E-13 121.5 24.2 188 126-339 298-494 (1045)
240 3lcr_A Tautomycetin biosynthet 99.0 2.6E-09 8.7E-14 111.9 13.1 207 494-725 79-302 (319)
241 3lp5_A Putative cell surface h 99.0 7.2E-09 2.5E-13 103.9 15.7 199 497-723 5-232 (250)
242 3vgz_A Uncharacterized protein 98.9 8.4E-07 2.9E-11 93.1 31.0 247 126-413 43-307 (353)
243 3c5v_A PME-1, protein phosphat 98.9 2.1E-08 7.1E-13 104.6 17.5 104 496-609 38-145 (316)
244 2k2q_B Surfactin synthetase th 98.9 3.9E-09 1.3E-13 105.4 10.7 91 495-600 12-109 (242)
245 3ils_A PKS, aflatoxin biosynth 98.9 3.7E-09 1.3E-13 107.5 9.6 101 494-609 19-122 (265)
246 1p0i_A Cholinesterase; serine 98.9 3.3E-09 1.1E-13 118.7 10.1 132 474-611 89-228 (529)
247 3g02_A Epoxide hydrolase; alph 98.9 2.1E-08 7.3E-13 108.3 16.0 120 476-609 93-219 (408)
248 2fj0_A JuvenIle hormone estera 98.9 8.2E-10 2.8E-14 124.1 5.0 131 474-610 87-233 (551)
249 1kez_A Erythronolide synthase; 98.9 3.3E-09 1.1E-13 110.0 9.1 105 494-611 65-173 (300)
250 3u4y_A Uncharacterized protein 98.9 7.8E-07 2.7E-11 92.7 27.5 250 128-412 44-307 (331)
251 1pby_B Quinohemoprotein amine 98.9 2.1E-07 7.3E-12 96.8 22.7 247 126-413 36-314 (337)
252 3u4y_A Uncharacterized protein 98.9 1.3E-06 4.4E-11 91.0 28.5 244 130-417 4-260 (331)
253 1ea5_A ACHE, acetylcholinester 98.8 4.6E-09 1.6E-13 117.6 8.9 132 474-611 91-230 (537)
254 3qyj_A ALR0039 protein; alpha/ 98.8 4.7E-08 1.6E-12 100.7 15.2 118 475-608 12-129 (291)
255 1dx4_A ACHE, acetylcholinester 98.8 8.5E-09 2.9E-13 116.6 10.0 116 493-610 138-267 (585)
256 2bce_A Cholesterol esterase; h 98.8 3.3E-09 1.1E-13 119.4 5.9 133 472-609 75-222 (579)
257 3hfq_A Uncharacterized protein 98.8 3.1E-06 1.1E-10 88.9 27.9 257 126-417 42-327 (347)
258 3hfq_A Uncharacterized protein 98.7 9.7E-07 3.3E-11 92.8 23.2 204 126-351 88-320 (347)
259 1ri6_A Putative isomerase YBHE 98.7 3.2E-06 1.1E-10 88.0 26.4 259 126-418 40-319 (343)
260 1tca_A Lipase; hydrolase(carbo 98.7 4.3E-08 1.5E-12 102.2 11.6 177 477-675 13-194 (317)
261 1bu8_A Protein (pancreatic lip 98.7 1.3E-08 4.6E-13 111.1 7.4 112 494-610 68-181 (452)
262 1ys1_X Lipase; CIS peptide Leu 98.7 3.7E-08 1.3E-12 102.7 10.4 104 495-610 7-114 (320)
263 1ex9_A Lactonizing lipase; alp 98.7 2.4E-08 8.1E-13 102.7 8.6 101 495-610 6-109 (285)
264 3bws_A Protein LP49; two-domai 98.7 3E-05 1E-09 83.9 32.5 199 125-351 171-391 (433)
265 3icv_A Lipase B, CALB; circula 98.7 9.4E-08 3.2E-12 98.2 11.6 113 484-611 54-170 (316)
266 1w52_X Pancreatic lipase relat 98.7 2.2E-08 7.7E-13 109.4 7.4 111 495-610 69-181 (452)
267 3scy_A Hypothetical bacterial 98.7 8E-05 2.7E-09 78.5 34.8 257 126-415 52-345 (361)
268 3bix_A Neuroligin-1, neuroligi 98.7 3.6E-08 1.2E-12 111.2 9.0 129 474-609 108-248 (574)
269 4h5i_A Guanine nucleotide-exch 98.6 2.6E-06 9E-11 90.6 22.7 199 127-349 137-342 (365)
270 2mad_H Methylamine dehydrogena 98.6 2.3E-05 7.9E-10 83.5 29.8 119 131-252 28-157 (373)
271 1ri6_A Putative isomerase YBHE 98.6 2.9E-06 9.8E-11 88.4 21.3 203 126-350 86-310 (343)
272 3zwl_B Eukaryotic translation 98.6 0.00013 4.4E-09 76.3 33.4 199 125-351 34-250 (369)
273 1jmx_B Amine dehydrogenase; ox 98.5 4.4E-06 1.5E-10 87.3 21.1 115 126-252 45-176 (349)
274 3scy_A Hypothetical bacterial 98.5 7.2E-06 2.5E-10 86.6 22.8 159 127-301 158-338 (361)
275 3n2z_B Lysosomal Pro-X carboxy 98.5 3.8E-07 1.3E-11 98.9 12.6 111 496-609 39-160 (446)
276 1nir_A Nitrite reductase; hemo 98.5 2.4E-05 8.3E-10 87.8 27.9 260 126-413 224-518 (543)
277 3bws_A Protein LP49; two-domai 98.5 1.7E-05 5.7E-10 85.9 25.4 201 126-343 214-427 (433)
278 2vdu_B TRNA (guanine-N(7)-)-me 98.5 3.1E-05 1.1E-09 84.7 27.7 246 125-413 104-397 (450)
279 2x5x_A PHB depolymerase PHAZ7; 98.5 1.5E-07 5.1E-12 98.6 7.6 109 497-611 41-166 (342)
280 1gxr_A ESG1, transducin-like e 98.5 0.00017 5.9E-09 74.4 31.2 237 125-413 53-300 (337)
281 3zwl_B Eukaryotic translation 98.5 6.2E-05 2.1E-09 78.8 27.7 150 125-282 76-238 (369)
282 1hpl_A Lipase; hydrolase(carbo 98.5 1.7E-07 5.8E-12 101.9 7.6 112 494-610 67-180 (449)
283 1rp1_A Pancreatic lipase relat 98.4 1.9E-07 6.7E-12 101.4 7.1 110 495-610 69-180 (450)
284 2dst_A Hypothetical protein TT 98.4 1.4E-06 4.7E-11 77.8 11.3 96 475-599 9-104 (131)
285 4gqb_B Methylosome protein 50; 98.4 2.6E-05 8.9E-10 82.1 22.7 196 125-346 129-329 (344)
286 4g56_B MGC81050 protein; prote 98.4 2.4E-05 8.2E-10 82.8 22.5 248 125-413 44-305 (357)
287 2cb9_A Fengycin synthetase; th 98.4 7.5E-07 2.6E-11 89.1 9.8 91 496-610 22-115 (244)
288 1pby_B Quinohemoprotein amine 98.4 1.7E-05 5.8E-10 82.2 20.1 124 151-280 12-152 (337)
289 2zyr_A Lipase, putative; fatty 98.4 1.8E-07 6.2E-12 101.3 5.0 113 495-611 21-167 (484)
290 1jof_A Carboxy-CIS,CIS-muconat 98.4 2.2E-05 7.5E-10 83.3 21.3 120 128-251 87-226 (365)
291 3g4e_A Regucalcin; six bladed 98.4 0.00018 6E-09 73.8 27.5 198 127-351 16-230 (297)
292 3sjl_D Methylamine dehydrogena 98.3 7.4E-05 2.5E-09 79.2 23.7 243 129-413 83-367 (386)
293 2dg1_A DRP35, lactonase; beta 98.3 0.00051 1.8E-08 71.2 30.3 203 125-348 46-261 (333)
294 3mkq_A Coatomer beta'-subunit; 98.3 0.00012 4E-09 86.2 28.1 196 125-350 15-217 (814)
295 1nir_A Nitrite reductase; hemo 98.3 0.00034 1.2E-08 78.5 30.3 253 126-412 181-461 (543)
296 1gxr_A ESG1, transducin-like e 98.3 0.0002 6.9E-09 73.9 26.5 187 125-344 143-333 (337)
297 1jmk_C SRFTE, surfactin synthe 98.3 1.1E-06 3.8E-11 86.7 8.3 90 496-610 17-109 (230)
298 2aq5_A Coronin-1A; WD40 repeat 98.3 2.4E-05 8.3E-10 84.0 19.2 151 125-284 133-289 (402)
299 2ynn_A Coatomer subunit beta'; 98.3 0.00055 1.9E-08 70.3 28.3 112 125-251 15-128 (304)
300 4ery_A WD repeat-containing pr 98.3 0.00037 1.3E-08 71.6 26.7 195 125-350 25-223 (312)
301 4gqb_B Methylosome protein 50; 98.2 0.00028 9.6E-09 74.1 26.0 249 125-414 32-294 (344)
302 2oiz_A Aromatic amine dehydrog 98.2 0.00059 2E-08 72.2 28.2 118 132-251 12-140 (361)
303 3ei3_B DNA damage-binding prot 98.2 0.0014 4.7E-08 69.4 31.2 200 125-351 75-283 (383)
304 2ghs_A AGR_C_1268P; regucalcin 98.2 0.00089 3.1E-08 69.6 29.1 196 127-348 52-258 (326)
305 3c75_H MADH, methylamine dehyd 98.2 0.00016 5.4E-09 77.9 23.6 116 132-252 81-210 (426)
306 3ow8_A WD repeat-containing pr 98.2 7.2E-05 2.5E-09 77.8 20.5 140 126-281 167-309 (321)
307 4g56_B MGC81050 protein; prote 98.2 7.5E-05 2.6E-09 78.9 20.6 197 125-349 141-342 (357)
308 1jmx_B Amine dehydrogenase; ox 98.2 0.00012 4.1E-09 76.2 21.6 142 128-279 4-163 (349)
309 2mad_H Methylamine dehydrogena 98.2 0.00035 1.2E-08 74.3 25.2 75 128-206 70-158 (373)
310 2hfk_A Pikromycin, type I poly 98.2 2.3E-06 7.9E-11 89.2 7.5 103 498-609 91-199 (319)
311 2vdu_B TRNA (guanine-N(7)-)-me 98.2 0.00071 2.4E-08 73.7 27.9 198 125-349 151-392 (450)
312 3ow8_A WD repeat-containing pr 98.2 0.00048 1.6E-08 71.4 25.2 193 125-350 82-279 (321)
313 1jof_A Carboxy-CIS,CIS-muconat 98.1 8.3E-05 2.8E-09 78.8 19.4 148 126-280 147-327 (365)
314 1pgu_A Actin interacting prote 98.1 0.00066 2.2E-08 76.7 28.1 197 125-351 20-239 (615)
315 2aq5_A Coronin-1A; WD40 repeat 98.1 0.00045 1.5E-08 73.9 25.1 201 125-350 83-299 (402)
316 1qks_A Cytochrome CD1 nitrite 98.1 0.0009 3.1E-08 75.1 28.3 261 127-413 243-542 (567)
317 1ei9_A Palmitoyl protein thioe 98.1 3.4E-06 1.2E-10 86.1 7.6 103 498-608 7-114 (279)
318 3e5z_A Putative gluconolactona 98.1 0.00029 9.8E-09 71.9 22.1 237 126-412 30-289 (296)
319 1nr0_A Actin interacting prote 98.1 0.0015 5E-08 74.4 30.2 195 126-350 21-221 (611)
320 2pm9_A Protein WEB1, protein t 98.1 0.00017 5.7E-09 77.2 21.1 205 125-350 14-249 (416)
321 4aez_A CDC20, WD repeat-contai 98.1 0.00083 2.8E-08 71.8 26.4 194 125-350 136-336 (401)
322 4h5i_A Guanine nucleotide-exch 98.1 0.00012 4.2E-09 77.6 19.2 157 125-300 178-343 (365)
323 1got_B GT-beta; complex (GTP-b 98.1 0.0037 1.3E-07 65.1 30.3 193 125-350 57-257 (340)
324 3lrv_A PRE-mRNA-splicing facto 98.1 0.0009 3.1E-08 69.9 25.6 162 125-311 127-299 (343)
325 2hih_A Lipase 46 kDa form; A1 98.1 1.1E-05 3.7E-10 87.0 10.5 114 495-610 51-212 (431)
326 3fm0_A Protein CIAO1; WDR39,SG 98.1 0.00076 2.6E-08 70.6 24.8 194 126-347 19-224 (345)
327 4gga_A P55CDC, cell division c 98.1 0.0035 1.2E-07 67.4 30.7 255 109-412 95-356 (420)
328 3vl1_A 26S proteasome regulato 98.1 0.00053 1.8E-08 73.5 24.0 196 125-346 141-363 (420)
329 3jrp_A Fusion protein of prote 98.0 0.0058 2E-07 63.8 31.0 199 125-350 13-240 (379)
330 3dr2_A Exported gluconolactona 98.0 0.00053 1.8E-08 70.5 22.1 159 126-301 47-223 (305)
331 1npe_A Nidogen, entactin; glyc 98.0 0.0019 6.5E-08 64.8 25.7 199 125-351 37-239 (267)
332 1erj_A Transcriptional repress 98.0 0.0015 5.1E-08 69.7 26.3 138 125-280 66-225 (393)
333 2dsn_A Thermostable lipase; T1 98.0 1.8E-05 6.2E-10 83.9 10.4 100 497-609 7-163 (387)
334 3vl1_A 26S proteasome regulato 98.0 0.0012 4.1E-08 70.6 24.7 111 126-251 100-212 (420)
335 4ery_A WD repeat-containing pr 97.9 0.0025 8.7E-08 65.2 25.7 113 125-251 109-223 (312)
336 2j04_A TAU60, YPL007P, hypothe 97.9 0.001 3.5E-08 73.5 22.8 189 125-347 87-296 (588)
337 2oiz_A Aromatic amine dehydrog 97.9 0.0026 9E-08 67.1 25.6 76 128-206 54-142 (361)
338 4ggc_A P55CDC, cell division c 97.9 0.018 6.1E-07 58.4 31.4 147 110-279 16-167 (318)
339 1k8k_C P40, ARP2/3 complex 41 97.9 0.0017 5.6E-08 68.0 23.7 144 125-282 10-162 (372)
340 1k8k_C P40, ARP2/3 complex 41 97.9 0.0025 8.4E-08 66.7 24.7 113 125-250 54-172 (372)
341 1r5m_A SIR4-interacting protei 97.9 0.006 2E-07 64.8 28.0 111 125-251 47-180 (425)
342 1sq9_A Antiviral protein SKI8; 97.8 0.003 1E-07 66.8 24.9 116 125-252 123-268 (397)
343 3ei3_B DNA damage-binding prot 97.8 0.0017 5.7E-08 68.7 22.6 116 125-252 165-283 (383)
344 3fm0_A Protein CIAO1; WDR39,SG 97.8 0.0041 1.4E-07 64.9 25.3 199 125-346 63-281 (345)
345 1mda_H Methylamine dehydrogena 97.8 0.002 6.8E-08 68.0 22.7 113 134-251 30-158 (368)
346 3dw8_B Serine/threonine-protei 97.8 0.0046 1.6E-07 66.6 26.2 58 125-187 30-114 (447)
347 2pbi_B Guanine nucleotide-bind 97.8 0.036 1.2E-06 57.9 32.3 195 125-350 66-271 (354)
348 3tej_A Enterobactin synthase c 97.8 2.4E-05 8.2E-10 81.8 7.3 103 495-612 100-206 (329)
349 3jrp_A Fusion protein of prote 97.8 0.006 2.1E-07 63.7 25.9 199 125-347 57-286 (379)
350 3mkq_A Coatomer beta'-subunit; 97.8 0.0016 5.3E-08 76.6 23.5 195 125-350 57-259 (814)
351 1qks_A Cytochrome CD1 nitrite 97.8 0.0016 5.4E-08 73.1 22.3 194 129-351 159-374 (567)
352 1got_B GT-beta; complex (GTP-b 97.8 0.0013 4.4E-08 68.6 20.2 140 125-279 186-329 (340)
353 3v65_B Low-density lipoprotein 97.8 0.0082 2.8E-07 63.9 26.4 197 126-350 118-318 (386)
354 1vyh_C Platelet-activating fac 97.8 0.008 2.7E-07 64.4 26.4 141 125-281 110-253 (410)
355 3v64_C Agrin; beta propeller, 97.7 0.014 4.8E-07 61.2 27.2 197 126-350 75-275 (349)
356 1erj_A Transcriptional repress 97.7 0.012 4E-07 62.7 27.0 114 125-251 167-287 (393)
357 3dwl_C Actin-related protein 2 97.7 0.00073 2.5E-08 71.3 17.4 144 125-282 13-166 (377)
358 2xyi_A Probable histone-bindin 97.7 0.0057 1.9E-07 66.0 24.6 205 125-347 183-409 (430)
359 3c75_H MADH, methylamine dehyd 97.7 0.0022 7.4E-08 69.0 20.7 76 128-206 122-211 (426)
360 1r5m_A SIR4-interacting protei 97.7 0.0031 1.1E-07 67.1 21.7 193 125-350 110-319 (425)
361 3i2n_A WD repeat-containing pr 97.7 0.0049 1.7E-07 63.9 22.8 198 125-349 20-242 (357)
362 3tjm_A Fatty acid synthase; th 97.6 0.00014 4.9E-09 74.0 9.6 95 495-609 23-123 (283)
363 3sjl_D Methylamine dehydrogena 97.6 0.00068 2.3E-08 71.7 14.5 117 131-252 40-170 (386)
364 2ymu_A WD-40 repeat protein; u 97.6 0.0057 1.9E-07 68.5 23.1 138 125-281 387-527 (577)
365 3dsm_A Uncharacterized protein 97.6 0.015 5.1E-07 60.3 24.5 244 133-412 51-304 (328)
366 3dwl_C Actin-related protein 2 97.6 0.0015 5.2E-08 68.8 17.2 113 125-250 57-176 (377)
367 2hes_X YDR267CP; beta-propelle 97.6 0.021 7.3E-07 58.9 25.7 202 125-346 60-278 (330)
368 4aez_A CDC20, WD repeat-contai 97.6 0.038 1.3E-06 58.7 28.4 240 126-414 96-341 (401)
369 3sov_A LRP-6, low-density lipo 97.6 0.031 1.1E-06 57.6 26.6 198 126-351 37-239 (318)
370 1nr0_A Actin interacting prote 97.6 0.011 3.9E-07 67.0 25.4 114 125-251 149-270 (611)
371 2ynn_A Coatomer subunit beta'; 97.6 0.022 7.4E-07 58.1 25.2 114 125-252 57-173 (304)
372 2pbi_B Guanine nucleotide-bind 97.6 0.028 9.6E-07 58.8 26.5 188 125-343 156-352 (354)
373 1yfq_A Cell cycle arrest prote 97.5 0.0091 3.1E-07 61.5 22.5 111 125-251 13-131 (342)
374 2iwa_A Glutamine cyclotransfer 97.5 0.011 3.8E-07 59.0 21.8 193 127-349 24-236 (266)
375 3lrv_A PRE-mRNA-splicing facto 97.5 0.0036 1.2E-07 65.2 19.4 114 125-251 172-292 (343)
376 1npe_A Nidogen, entactin; glyc 97.5 0.071 2.4E-06 53.0 28.3 186 135-349 1-197 (267)
377 2xzm_R RACK1; ribosome, transl 97.5 0.0091 3.1E-07 62.1 22.3 140 125-281 78-232 (343)
378 3f3f_A Nucleoporin SEH1; struc 97.5 0.027 9.2E-07 57.5 25.7 114 125-252 13-144 (351)
379 2pm9_A Protein WEB1, protein t 97.5 0.0015 5.2E-08 69.6 16.4 200 125-350 115-337 (416)
380 1pgu_A Actin interacting prote 97.5 0.0055 1.9E-07 69.0 21.5 196 126-350 67-283 (615)
381 4e54_B DNA damage-binding prot 97.5 0.0017 5.7E-08 70.4 16.4 199 125-350 121-327 (435)
382 1vyh_C Platelet-activating fac 97.5 0.024 8.3E-07 60.6 25.5 112 125-251 152-265 (410)
383 3i2n_A WD repeat-containing pr 97.5 0.015 5.3E-07 60.0 23.0 198 125-346 67-289 (357)
384 2ymu_A WD-40 repeat protein; u 97.5 0.017 5.8E-07 64.6 24.8 188 125-348 346-537 (577)
385 2pm7_B Protein transport prote 97.4 0.086 3E-06 53.3 27.9 198 125-346 11-236 (297)
386 3sfz_A APAF-1, apoptotic pepti 97.4 0.0049 1.7E-07 76.2 21.9 192 126-351 964-1159(1249)
387 3dm0_A Maltose-binding peripla 97.4 0.0078 2.7E-07 69.4 22.3 194 125-350 432-632 (694)
388 1ijq_A LDL receptor, low-densi 97.4 0.061 2.1E-06 55.3 26.8 199 126-351 32-239 (316)
389 4e54_B DNA damage-binding prot 97.4 0.0037 1.3E-07 67.6 18.2 115 126-252 212-328 (435)
390 4a11_B DNA excision repair pro 97.4 0.015 5.1E-07 61.4 22.6 143 125-284 45-208 (408)
391 2xzm_R RACK1; ribosome, transl 97.4 0.1 3.6E-06 53.9 28.7 138 125-278 120-271 (343)
392 4a11_B DNA excision repair pro 97.4 0.023 8E-07 59.8 24.1 114 125-252 101-219 (408)
393 4ebb_A Dipeptidyl peptidase 2; 97.4 0.00074 2.5E-08 73.9 12.3 113 495-610 42-163 (472)
394 1sq9_A Antiviral protein SKI8; 97.4 0.0097 3.3E-07 62.8 20.7 115 125-251 188-322 (397)
395 4gga_A P55CDC, cell division c 97.4 0.029 9.8E-07 60.1 24.7 197 125-348 149-393 (420)
396 3g4e_A Regucalcin; six bladed 97.4 0.009 3.1E-07 60.9 19.6 150 125-284 99-263 (297)
397 3hrp_A Uncharacterized protein 97.4 0.017 5.8E-07 61.9 22.6 199 125-350 132-354 (409)
398 2oit_A Nucleoporin 214KDA; NH2 97.4 0.004 1.4E-07 67.6 17.5 116 125-250 94-222 (434)
399 2ece_A 462AA long hypothetical 97.4 0.03 1E-06 59.9 23.4 121 127-249 141-287 (462)
400 3mmy_A MRNA export factor; mRN 97.4 0.047 1.6E-06 56.4 25.1 139 125-282 41-188 (368)
401 2j04_A TAU60, YPL007P, hypothe 97.3 0.0036 1.2E-07 69.2 16.6 183 126-350 18-211 (588)
402 3v7d_B Cell division control p 97.3 0.05 1.7E-06 58.8 26.2 187 130-348 275-463 (464)
403 2ece_A 462AA long hypothetical 97.3 0.0038 1.3E-07 66.7 16.3 150 128-281 192-399 (462)
404 3frx_A Guanine nucleotide-bind 97.3 0.075 2.6E-06 54.4 25.7 142 125-281 109-256 (319)
405 2dg1_A DRP35, lactonase; beta 97.3 0.016 5.4E-07 59.7 20.6 162 126-301 137-315 (333)
406 1whs_A Serine carboxypeptidase 97.3 0.0015 5.1E-08 64.5 11.8 144 467-614 21-190 (255)
407 3dr2_A Exported gluconolactona 97.3 0.0026 9.1E-08 65.1 14.2 148 126-282 133-296 (305)
408 3v64_C Agrin; beta propeller, 97.3 0.091 3.1E-06 54.8 26.2 175 152-350 55-234 (349)
409 3dw8_B Serine/threonine-protei 97.3 0.013 4.4E-07 63.0 20.3 112 125-251 179-315 (447)
410 3v65_B Low-density lipoprotein 97.3 0.057 1.9E-06 57.3 24.9 175 152-350 98-277 (386)
411 3frx_A Guanine nucleotide-bind 97.3 0.036 1.2E-06 56.9 22.7 139 125-281 67-215 (319)
412 3p5b_L Low density lipoprotein 97.2 0.16 5.3E-06 54.2 28.0 199 126-351 114-321 (400)
413 1ijq_A LDL receptor, low-densi 97.2 0.15 5.1E-06 52.3 27.0 175 152-350 12-195 (316)
414 3k26_A Polycomb protein EED; W 97.2 0.04 1.4E-06 56.9 22.9 113 125-251 71-192 (366)
415 4aow_A Guanine nucleotide-bind 97.2 0.21 7.1E-06 50.9 28.0 112 125-251 40-159 (340)
416 3qqz_A Putative uncharacterize 97.2 0.2 6.8E-06 49.5 27.2 212 106-347 12-250 (255)
417 3odt_A Protein DOA1; ubiquitin 97.2 0.15 5E-06 51.2 26.4 190 125-351 20-215 (313)
418 1mda_H Methylamine dehydrogena 97.2 0.0057 2E-07 64.5 15.8 60 128-187 69-142 (368)
419 3jro_A Fusion protein of prote 97.2 0.02 6.9E-07 66.7 21.9 114 125-252 11-133 (753)
420 2pm7_B Protein transport prote 97.2 0.13 4.3E-06 52.0 25.5 199 125-347 55-284 (297)
421 3sov_A LRP-6, low-density lipo 97.2 0.27 9.1E-06 50.5 27.8 177 150-350 13-197 (318)
422 3v7d_B Cell division control p 97.2 0.36 1.2E-05 51.9 30.3 190 125-350 164-381 (464)
423 2xyi_A Probable histone-bindin 97.1 0.031 1E-06 60.2 21.4 200 125-349 130-352 (430)
424 3dm0_A Maltose-binding peripla 97.1 0.15 5E-06 58.6 27.8 195 125-350 384-592 (694)
425 3mmy_A MRNA export factor; mRN 97.1 0.007 2.4E-07 62.8 14.8 58 125-187 88-148 (368)
426 3nol_A Glutamine cyclotransfer 97.1 0.081 2.8E-06 52.3 21.3 190 126-347 45-253 (262)
427 3vu4_A KMHSV2; beta-propeller 97.1 0.021 7.3E-07 59.7 18.5 108 130-252 144-272 (355)
428 3m0c_C LDL receptor, low-densi 97.0 0.23 7.7E-06 57.8 28.6 198 127-351 427-633 (791)
429 3dsm_A Uncharacterized protein 97.0 0.15 5.2E-06 52.5 24.8 225 139-412 4-256 (328)
430 4aow_A Guanine nucleotide-bind 97.0 0.12 4.2E-06 52.6 24.0 142 125-281 88-234 (340)
431 1yfq_A Cell cycle arrest prote 97.0 0.052 1.8E-06 55.6 20.8 111 125-251 103-225 (342)
432 1ivy_A Human protective protei 97.0 0.0041 1.4E-07 67.3 12.5 140 468-613 22-184 (452)
433 1fwx_A Nitrous oxide reductase 97.0 0.2 6.8E-06 55.5 25.5 267 129-420 90-442 (595)
434 4ggc_A P55CDC, cell division c 96.9 0.18 6E-06 50.9 24.0 195 125-343 69-310 (318)
435 3sfz_A APAF-1, apoptotic pepti 96.9 0.03 1E-06 69.1 21.2 144 125-282 617-763 (1249)
436 3e5z_A Putative gluconolactona 96.9 0.013 4.4E-07 59.4 14.8 150 126-301 117-285 (296)
437 1pjx_A Dfpase, DIISOPROPYLFLUO 96.9 0.37 1.2E-05 48.6 25.9 198 126-350 20-256 (314)
438 3p5b_L Low density lipoprotein 96.9 0.24 8.2E-06 52.7 25.0 176 151-350 93-277 (400)
439 3hrp_A Uncharacterized protein 96.8 0.21 7.2E-06 53.3 24.5 112 129-251 176-298 (409)
440 4a0p_A LRP6, LRP-6, low-densit 96.8 0.4 1.4E-05 54.2 27.7 198 126-352 39-239 (628)
441 2ghs_A AGR_C_1268P; regucalcin 96.8 0.082 2.8E-06 54.5 20.5 148 125-284 135-293 (326)
442 2hes_X YDR267CP; beta-propelle 96.8 0.58 2E-05 47.9 27.1 193 125-346 16-228 (330)
443 3fvz_A Peptidyl-glycine alpha- 96.8 0.37 1.3E-05 49.4 25.0 118 125-251 25-175 (329)
444 3m0c_C LDL receptor, low-densi 96.7 0.26 8.8E-06 57.3 25.7 176 152-350 406-589 (791)
445 2vpj_A Kelch-like protein 12; 96.7 0.28 9.5E-06 49.5 23.5 244 150-418 31-287 (301)
446 2oit_A Nucleoporin 214KDA; NH2 96.7 0.052 1.8E-06 58.6 18.3 116 125-251 151-278 (434)
447 3jro_A Fusion protein of prote 96.7 0.061 2.1E-06 62.6 19.9 114 125-252 55-190 (753)
448 3gre_A Serine/threonine-protei 96.6 0.17 5.8E-06 54.0 22.0 144 125-282 65-234 (437)
449 2iwa_A Glutamine cyclotransfer 96.6 0.63 2.2E-05 46.2 24.5 157 171-352 23-183 (266)
450 2oaj_A Protein SNI1; WD40 repe 96.6 0.2 6.8E-06 59.5 24.4 110 125-251 19-129 (902)
451 3iz6_a 40S ribosomal protein R 96.6 0.24 8.1E-06 52.1 22.3 114 125-251 159-280 (380)
452 3iz6_a 40S ribosomal protein R 96.6 0.064 2.2E-06 56.5 17.9 141 125-280 207-362 (380)
453 1rwi_B Serine/threonine-protei 96.6 0.15 5.2E-06 50.2 19.7 191 126-349 26-221 (270)
454 3k26_A Polycomb protein EED; W 96.6 0.093 3.2E-06 54.1 18.8 142 125-282 20-181 (366)
455 3mbr_X Glutamine cyclotransfer 96.5 0.48 1.6E-05 46.3 22.0 190 127-348 24-233 (243)
456 1rwi_B Serine/threonine-protei 96.5 0.26 8.9E-06 48.5 20.8 190 126-349 69-263 (270)
457 3gre_A Serine/threonine-protei 96.5 0.28 9.5E-06 52.3 22.3 113 125-251 113-245 (437)
458 3s94_A LRP-6, low-density lipo 96.4 0.24 8.4E-06 55.9 22.4 198 126-351 42-244 (619)
459 3vu4_A KMHSV2; beta-propeller 96.4 0.64 2.2E-05 48.2 24.2 147 126-282 61-260 (355)
460 2p4o_A Hypothetical protein; p 96.4 0.63 2.2E-05 47.1 23.5 199 126-349 34-241 (306)
461 2fp8_A Strictosidine synthase; 96.4 0.22 7.7E-06 50.9 19.9 157 126-301 128-312 (322)
462 2w18_A PALB2, fancn, partner a 96.3 0.099 3.4E-06 54.0 16.3 126 149-280 202-344 (356)
463 3bg1_A Protein SEC13 homolog; 96.2 0.13 4.3E-06 52.6 16.6 113 125-251 15-136 (316)
464 2px6_A Thioesterase domain; th 96.2 0.017 5.9E-07 59.4 10.0 94 495-608 45-144 (316)
465 1n7d_A LDL receptor, low-densi 96.0 0.023 7.7E-07 65.5 11.2 198 126-350 408-614 (699)
466 3f3f_A Nucleoporin SEH1; struc 96.0 0.35 1.2E-05 48.9 19.4 113 125-251 112-249 (351)
467 3odt_A Protein DOA1; ubiquitin 96.0 0.32 1.1E-05 48.7 18.7 133 125-275 144-279 (313)
468 3no2_A Uncharacterized protein 95.9 1.5 5.2E-05 43.6 24.1 91 150-251 15-108 (276)
469 2fp8_A Strictosidine synthase; 95.9 1.3 4.4E-05 45.0 23.1 198 127-349 22-268 (322)
470 3nok_A Glutaminyl cyclase; bet 95.9 0.23 7.8E-06 49.1 16.1 186 128-347 59-263 (268)
471 3s94_A LRP-6, low-density lipo 95.9 1.1 3.8E-05 50.5 24.2 196 128-351 353-552 (619)
472 1ac5_A KEX1(delta)P; carboxype 95.9 0.045 1.5E-06 59.7 12.1 130 477-613 48-218 (483)
473 2ovr_B FBW7, F-BOX/WD repeat p 95.9 2.3 8E-05 45.2 28.7 182 134-351 208-392 (445)
474 4a0p_A LRP6, LRP-6, low-densit 95.9 3 0.0001 47.0 27.5 197 128-351 344-550 (628)
475 2qe8_A Uncharacterized protein 95.8 0.13 4.3E-06 53.4 14.9 163 126-301 122-336 (343)
476 2oaj_A Protein SNI1; WD40 repe 95.8 0.088 3E-06 62.6 15.1 113 125-251 100-242 (902)
477 4gq1_A NUP37; propeller, trans 95.8 0.23 7.7E-06 52.5 17.0 73 125-206 138-220 (393)
478 1pjx_A Dfpase, DIISOPROPYLFLUO 95.8 0.46 1.6E-05 47.8 18.7 158 126-301 119-298 (314)
479 1fwx_A Nitrous oxide reductase 95.7 0.17 5.9E-06 55.9 15.8 99 148-251 173-308 (595)
480 1gxs_A P-(S)-hydroxymandelonit 95.7 0.074 2.5E-06 52.8 11.6 145 467-614 26-195 (270)
481 3tc9_A Hypothetical hydrolase; 95.7 0.45 1.5E-05 51.1 18.9 157 125-301 138-300 (430)
482 4hw6_A Hypothetical protein, I 95.6 1.1 3.7E-05 48.1 21.9 157 125-301 140-303 (433)
483 1n7d_A LDL receptor, low-densi 95.6 0.082 2.8E-06 60.8 13.6 176 151-350 387-571 (699)
484 4gq1_A NUP37; propeller, trans 95.5 0.23 7.9E-06 52.4 15.7 146 125-282 188-379 (393)
485 2qe8_A Uncharacterized protein 95.5 0.45 1.5E-05 49.1 17.6 122 126-251 19-154 (343)
486 2z2n_A Virginiamycin B lyase; 95.5 2.2 7.5E-05 42.1 22.8 188 126-349 101-294 (299)
487 4az3_A Lysosomal protective pr 95.4 0.16 5.5E-06 51.2 13.1 139 472-614 28-187 (300)
488 4hvt_A Ritya.17583.B, post-pro 95.3 0.65 2.2E-05 53.2 19.4 120 129-251 245-381 (711)
489 3tc9_A Hypothetical hydrolase; 95.3 3.5 0.00012 44.0 24.4 118 126-251 181-301 (430)
490 4hw6_A Hypothetical protein, I 95.3 2.9 9.8E-05 44.8 23.5 118 126-251 184-304 (433)
491 1q7f_A NHL, brain tumor CG1071 95.2 2.7 9.2E-05 41.4 22.2 191 126-348 79-278 (286)
492 1p22_A F-BOX/WD-repeat protein 95.2 3.9 0.00013 43.3 26.4 186 130-351 138-326 (435)
493 2w18_A PALB2, fancn, partner a 95.2 3.4 0.00012 42.5 23.6 119 125-251 113-269 (356)
494 1p22_A F-BOX/WD-repeat protein 95.0 4.3 0.00015 42.9 26.9 182 131-349 179-364 (435)
495 3bg1_A Protein SEC13 homolog; 95.0 0.84 2.9E-05 46.3 17.7 162 125-312 105-300 (316)
496 2j04_B YDR362CP, TAU91; beta p 94.9 0.22 7.4E-06 55.2 13.6 140 125-279 268-414 (524)
497 1cpy_A Serine carboxypeptidase 94.9 0.16 5.3E-06 54.2 11.8 133 476-613 26-182 (421)
498 2j04_B YDR362CP, TAU91; beta p 94.7 1.8 6.3E-05 47.6 20.5 193 125-348 209-426 (524)
499 2ovr_B FBW7, F-BOX/WD repeat p 94.7 5.3 0.00018 42.3 29.7 184 130-351 124-309 (445)
500 1tib_A Lipase; hydrolase(carbo 94.6 0.058 2E-06 54.1 7.4 110 478-608 61-174 (269)
No 1
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=5.9e-77 Score=701.33 Aligned_cols=621 Identities=24% Similarity=0.403 Sum_probs=518.9
Q ss_pred hHHHHhCCCCCCCCCCCeEeCCeEEEEEccCCCeeEEEEEEecCCCcccccCCCCCCCccCCCCCC--CcEEEeeccccc
Q 004839 40 LAWLLSFPLLPSAGAPGDLHHRRLYYRRVEEGKQYLVLCRRLVSLNEEFISHKSPAAGFDFTSGKK--IEQKLLDYNQEA 117 (728)
Q Consensus 40 ~~~~~~~r~~~~~~~~p~~~g~~~yy~~~~~g~e~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lld~n~~~ 117 (728)
|...|++|+++++.++|.++|+|+||.|..+|++|+++||++... ...+ .+++|+|+|.++
T Consensus 106 l~~e~~~~~~~~~~~~p~~~g~~~yy~~~~~g~~~~vl~r~~~~~-----------------~~~~~~~~~vlld~n~~a 168 (751)
T 2xe4_A 106 IYAEHISHINEDDMSAPYVYGKYRYYTREVKGKPYKIYCRVFTDK-----------------EPGDVAAEEVIIDVNQVA 168 (751)
T ss_dssp HHHHHHHTSCSSEECCCEEETTEEEEEEECTTCCSCEEEEEETTS-----------------CTTCTTTCEEEEEHHHHT
T ss_pred HHHHHHHhcccccCCCCeEECCEEEEEEECCCCceeEEEEEcCCC-----------------CCCCCcCCEEEechhHhc
Confidence 667788999999999999999999999999999999999987510 0013 578999999999
Q ss_pred ccCCceEEeeceeeC-CCCCEEEEEEEcCCCcEEEEEEEECCCC-ceeccCccceeeeEEEecCCCEEEEEEecCCCCcc
Q 004839 118 ERFGGYAYEELSEVS-PDHKFLAYTMYDKDNDYFTLSVRNLNSG-ALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPY 195 (728)
Q Consensus 118 ~~~~~~~~~~~~~~S-PDG~~lA~~~~~~g~e~~~l~v~dl~tg-~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~ 195 (728)
++++ ++.++.++|| |||++|||+.+..|++.++||++|+++| +.+..........+.|||||+.|+|++.+...++.
T Consensus 169 ~~~~-~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 169 EGKA-FCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLREN 247 (751)
T ss_dssp TTCS-CCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEE
T ss_pred cCCC-eEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCC
Confidence 8766 8899999999 9999999999999999999999999999 75433233345789999999999999887666778
Q ss_pred eeEEEECCCCC-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCe--EEeeecCCceEEEEe-
Q 004839 196 QIYCSIIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL--TLIWECEGLAHCIVE- 271 (728)
Q Consensus 196 ~v~~~~l~t~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~--~~l~~~~~~~~~~~~- 271 (728)
+||++++++++ ++++++++.+..++.++.|||||++|++.+.+...++||++|++++.+++ +.+.++.....+.++
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~ 327 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM 327 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee
Confidence 99999999986 56788887777788889999999999999987778999999998854456 778777666667777
Q ss_pred ecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeE-EeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCC
Q 004839 272 HHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWES-VFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 272 ~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
++|+.|||++|.++. .+++|+.++++ .+ +.|+. ++++.++..+.++.+++++|++..+.+|..+|+++++..
T Consensus 328 ~~g~~l~~~t~~~~a----~~~~L~~~d~~-~~--~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl~~ 400 (751)
T 2xe4_A 328 HGTSHLVILTNEGGA----VNHKLLIAPRG-QP--SDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMADS 400 (751)
T ss_dssp ETTTEEEEEECTTTC----TTCEEEEEETT-ST--TCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEECCT
T ss_pred eeCCEEEEEeCCCCC----CCcEEEEEcCC-Cc--ccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEeccc
Confidence 779999999998611 26899999976 32 57888 888877778899999999999999999999999999621
Q ss_pred CCCCcceeecccc-cccccCCCceeeeecCCCc--cCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEeeccccccccc
Q 004839 351 PAGKGVVHLKELH-PHFLPLPKYVSQIVPGPNY--DYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQQNMLRERTRI 427 (728)
Q Consensus 351 ~~~~~~~~~~~~~-~~~~~~p~~~~~i~~~~~~--~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 427 (728)
..+ .+.+.+ ...+.+|...+.+..+.+. +.+++.++|+++|+++|+++|.+|+.+++.+.|++.+++.
T Consensus 401 ~~~----~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~~----- 471 (751)
T 2xe4_A 401 QDG----VFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGG----- 471 (751)
T ss_dssp TTS----CCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCCT-----
T ss_pred ccc----cccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEecccccc-----
Confidence 000 000011 2345666543322222222 5678889999999999999999999999988888665420
Q ss_pred cccCccccccccccccCccccccccCCCCccCCCCCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCC
Q 004839 428 LYGTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYG 507 (728)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~ 507 (728)
.++ ...+.++.+++++.||.+|++++++|++.+.+++.|+||++|||++
T Consensus 472 ------------------------~~~-------~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~ 520 (751)
T 2xe4_A 472 ------------------------GFD-------AANYKVERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYG 520 (751)
T ss_dssp ------------------------TCC-------GGGEEEEEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTT
T ss_pred ------------------------CCC-------ccceEEEEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCC
Confidence 012 3456789999999999999999999998766678999999999999
Q ss_pred CCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCcccc-ccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccH
Q 004839 508 ELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHH-DGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGG 586 (728)
Q Consensus 508 ~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~-~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG 586 (728)
....+.|....+.|+++||+|+++|+||+|++|+.|+. .+...++...++|+++++++|++++++|++||+|+|+|+||
T Consensus 521 ~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG 600 (751)
T 2xe4_A 521 LSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGG 600 (751)
T ss_dssp CCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHH
T ss_pred cCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHH
Confidence 88777888888899999999999999999999999999 88888888999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCC-eEEEEc
Q 004839 587 LLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYP-AVLVTS 665 (728)
Q Consensus 587 ~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P-~lli~g 665 (728)
++++++++++|++|+|+|+.+|++|+..++.....++....+.++|+|.+++.++.+.++||+.++.+ +++| +|++||
T Consensus 601 ~la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~-~~~Pp~Lii~G 679 (751)
T 2xe4_A 601 LLMGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRA-QEYPNIMVQCG 679 (751)
T ss_dssp HHHHHHHHHCGGGCSEEEEESCCCCHHHHHTCTTSTTHHHHTTTTCCTTSHHHHHHHHHHCTGGGCCS-SCCCEEEEEEE
T ss_pred HHHHHHHHhCchheeEEEEeCCcchHHhhhcccCcccchhhHHHcCCCCCHHHHHHHHhcChhhhhcc-CCCCceeEEee
Confidence 99999999999999999999999999887766666766556677898877777888999999999997 8998 999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCCCCccEEE--EcCCCCCCCc-hhhhHHHHHHHHHHHHHhhcC
Q 004839 666 SFNTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEEN-RYLQCKESALETAFLIKMMES 728 (728)
Q Consensus 666 ~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~-~~~~~~~~~~~~afl~~~l~~ 728 (728)
..|.+||++++.+++++|++++++. +++++ ++++||++.. ..+.++..+.+++||.++|+.
T Consensus 680 ~~D~~vp~~~~~~~~~~L~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~ 743 (751)
T 2xe4_A 680 LHDPRVAYWEPAKWVSKLRECKTDN--NEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKS 743 (751)
T ss_dssp TTCSSSCTHHHHHHHHHHHHHCCSC--CCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCC--ceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999987642 55555 6999999876 667888888999999999863
No 2
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=7.7e-77 Score=696.17 Aligned_cols=604 Identities=22% Similarity=0.296 Sum_probs=508.6
Q ss_pred chhhHHHHhCCCCCCCCCCCeEeCCeEEEEEccCCCeeEEEEEEecCCCcccccCCCCCCCccCCCCCCCcEEEeecccc
Q 004839 37 RWPLAWLLSFPLLPSAGAPGDLHHRRLYYRRVEEGKQYLVLCRRLVSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQE 116 (728)
Q Consensus 37 ~~~~~~~~~~r~~~~~~~~p~~~g~~~yy~~~~~g~e~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~ 116 (728)
+..+..-|++|+++++.++|.++|+|+||.+..+|++|+++||+.. ++++++|||+|++
T Consensus 65 ~~~l~~~~~~~~~~~~~~~p~~~g~~~y~~~~~~~~~~~~~~r~~~---------------------~~~~~vllD~n~l 123 (693)
T 3iuj_A 65 RAAIKEKLAASWNYAKEGAPFREGRYHYFFKNDGLQNQNVLWRQQE---------------------GKPAEVFLDPNTL 123 (693)
T ss_dssp HHHHHHHHHHHSCCCEECCCEEETTEEEEEEECSSCSSCEEEEECT---------------------TSCCEEEECGGGG
T ss_pred HHHHHHHHHHhhccccCCCCEEECCEEEEEEEcCCCceeEEEEeCC---------------------CCCcEEEEehhhc
Confidence 4447788999999999999999999999999999999999999743 2467899999999
Q ss_pred cccCCceEEeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccce-eeeEEEecCCCEEEEEEecCC----
Q 004839 117 AERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVR-VSNIAWAKDGQALIYVVTDQN---- 191 (728)
Q Consensus 117 ~~~~~~~~~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~-~~~~~WspDg~~l~y~~~~~~---- 191 (728)
+++ + ++.++.++|||||++|||+.+..|++.++|+|+|++||+.+..+.... ...++|| ||+.|+|++.+..
T Consensus 124 a~~-~-~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 124 SPD-G-TTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp STT-S-CCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred cCC-C-cEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccc
Confidence 987 3 678999999999999999999999999999999999999877654433 5789999 9999999987754
Q ss_pred ----CCcceeEEEECCCCC-ceeEEeeecC--cceEEEEEEcCCCCEEEEEEcCCCc-eEEEEEeCCCCCCCeEEeeecC
Q 004839 192 ----KRPYQIYCSIIGSTD-EDALLLEESN--ENVYVNIRHTKDFHFVCVHTFSTTS-SKVFLINAADPFSGLTLIWECE 263 (728)
Q Consensus 192 ----~~~~~v~~~~l~t~~-~~~lv~~~~~--~~~~~~~~~SpDg~~l~~~~~~~~~-~~l~~~dl~~~~~~~~~l~~~~ 263 (728)
.++.+||+|++++++ ++++++++.+ +.++.++.+||||++|++.+.+... ++||++|++++.+.++.+..+.
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC
Confidence 567899999999987 6788988766 4567789999999999998876654 6999999988655788888887
Q ss_pred CceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEE
Q 004839 264 GLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRL 343 (728)
Q Consensus 264 ~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l 343 (728)
+...+.++++|+.|||++|.++. +++|+.++++ .+....|+.++++..+. + .+.+++++|++..+++|.++|
T Consensus 281 ~~~~~~~~~~g~~l~~~t~~~~~-----~~~l~~~d~~-~~~~~~~~~l~~~~~~~-~-~~s~~g~~lv~~~~~~g~~~l 352 (693)
T 3iuj_A 281 DADVSLVDNKGSTLYLLTNRDAP-----NRRLVTVDAA-NPGPAHWRDLIPERQQV-L-TVHSGSGYLFAEYMVDATARV 352 (693)
T ss_dssp SSCEEEEEEETTEEEEEECTTCT-----TCEEEEEETT-SCCGGGCEEEECCCSSC-E-EEEEETTEEEEEEEETTEEEE
T ss_pred CceEEEEeccCCEEEEEECCCCC-----CCEEEEEeCC-CCCccccEEEecCCCCE-E-EEEEECCEEEEEEEECCeeEE
Confidence 77667789999999999998653 5899999987 55556799888776544 5 899999999999999999999
Q ss_pred EEEecCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEeeccccc
Q 004839 344 CSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQQNMLRE 423 (728)
Q Consensus 344 ~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~~~~~~~~ 423 (728)
++++++++. ...+.+|.... +. +.+.+++++.++|.++|+++|+.+|.+|+.+++.+.+++++..
T Consensus 353 ~~~d~~g~~-----------~~~l~~p~~~~-~~-~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~~-- 417 (693)
T 3iuj_A 353 EQFDYEGKR-----------VREVALPGLGS-VS-GFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAAP-- 417 (693)
T ss_dssp EEECTTSCE-----------EEEECCSSSSE-EE-ECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCCSS--
T ss_pred EEEECCCCe-----------eEEeecCCCce-EE-eeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCCCC--
Confidence 999986321 23456665322 11 3344678899999999999999999999999998888765431
Q ss_pred cccccccCccccccccccccCccccccccCCCCccCCCCCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEc
Q 004839 424 RTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGH 503 (728)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~h 503 (728)
++ +..+.++++++++.||.+|++++++|++...+++.|+||++|
T Consensus 418 -----------------------------~~-------~~~~~~~~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~h 461 (693)
T 3iuj_A 418 -----------------------------FK-------PEDYVSEQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGY 461 (693)
T ss_dssp -----------------------------CC-------GGGEEEEEEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECC
T ss_pred -----------------------------cC-------hhhCeeEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEEC
Confidence 12 456789999999999999999999999876678899999999
Q ss_pred CCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeC
Q 004839 504 GAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYS 583 (728)
Q Consensus 504 Gg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S 583 (728)
||++....+.|....+.|+++||+|+++|+||+|++|..|+.++...++.+.++|++++++||++++++|++||+|+|+|
T Consensus 462 Gg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S 541 (693)
T 3iuj_A 462 GGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGS 541 (693)
T ss_dssp CCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEET
T ss_pred CCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEEC
Confidence 99998888889988899999999999999999999999999999998888999999999999999999999999999999
Q ss_pred ccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHH-HHHHHccCcccccccCCCCC-eE
Q 004839 584 AGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDD-FHAIRNYSPYDNIQKDVLYP-AV 661 (728)
Q Consensus 584 ~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~-~~~~~~~sP~~~i~~~~~~P-~l 661 (728)
+||++++++++++|++|+|+|+.+|++|+..+.. +.....+..+||+|.+++. ++.+.++||++++.+.+++| +|
T Consensus 542 ~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~---~~~~~~~~~~~g~p~~~~~~~~~~~~~sp~~~~~~~~~~Pp~L 618 (693)
T 3iuj_A 542 NGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHT---FTAGTGWAYDYGTSADSEAMFDYLKGYSPLHNVRPGVSYPSTM 618 (693)
T ss_dssp HHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGG---SGGGGGCHHHHCCTTSCHHHHHHHHHHCHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHHHhhCccceeEEEecCCcchhhhhcc---CCCchhHHHHcCCccCHHHHHHHHHhcCHHHhhcccCCCCcee
Confidence 9999999999999999999999999999886542 2333346677899977666 88899999999998647898 99
Q ss_pred EEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEE--EcCCCCCCCc-hhhhHHHHHHHHHHHHHhhcC
Q 004839 662 LVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEEN-RYLQCKESALETAFLIKMMES 728 (728)
Q Consensus 662 li~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~-~~~~~~~~~~~~afl~~~l~~ 728 (728)
++||..|++||++++.+|+++|++++.. ..++.+ ++++||++.. ..+.++..+.+++||.++|+.
T Consensus 619 i~~G~~D~~v~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 686 (693)
T 3iuj_A 619 VTTADHDDRVVPAHSFKFAATLQADNAG--PHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMGY 686 (693)
T ss_dssp EEEESSCSSSCTHHHHHHHHHHHHHCCS--SSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCCCCCCChhHHHHHHHHHHhhCCC--CCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999998521 134544 8999999877 578888999999999999974
No 3
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=6.4e-71 Score=648.92 Aligned_cols=602 Identities=19% Similarity=0.245 Sum_probs=500.5
Q ss_pred hHHHHhCCCCCCCCCCCeEeCCeEEEEEccCCCeeEEEEEEecCCCcccccCCCCCCCccCCCCCCCcEEEeeccccccc
Q 004839 40 LAWLLSFPLLPSAGAPGDLHHRRLYYRRVEEGKQYLVLCRRLVSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQEAER 119 (728)
Q Consensus 40 ~~~~~~~r~~~~~~~~p~~~g~~~yy~~~~~g~e~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~ 119 (728)
+..-|+.+++..+.+.|.++|+++||.+..+|++++.+||++..+ +.+++|+|+|.+++.
T Consensus 63 l~~~~~~~~~~~~~~~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~--------------------~~~~~lld~~~l~~~ 122 (710)
T 2xdw_A 63 YKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLE--------------------GEARVFLDPNILSDD 122 (710)
T ss_dssp HHHHHHHHHCSCEECCCEEETTEEEEEEECSSCSSCEEEEESSTT--------------------SCCEEEECGGGGCTT
T ss_pred HHHHHHHhhccccCCCCEEECCEEEEEEEcCCceEEEEEEEcCCC--------------------CCcEEEECHHHhccC
Confidence 556677788888999999999999999999999999999986432 567899999999876
Q ss_pred CCceEEeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccc-eeeeEEEecCCCEEEEEEecCC-------
Q 004839 120 FGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAV-RVSNIAWAKDGQALIYVVTDQN------- 191 (728)
Q Consensus 120 ~~~~~~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~------- 191 (728)
+ ...+..++|||||++|||+.+..|++.++|+++|+++|+.+..+... .+..++|||||+.|+|++.+..
T Consensus 123 ~--~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 G--TVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp S--CEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred C--CEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3 45789999999999999999999999899999999999987754422 3578999999999999987654
Q ss_pred ----CCcceeEEEECCCCC-ceeEEeeecC-cceEEEEEEcCCCCEEEEEEcCCC--ceEEEEEeCCC------CCCCeE
Q 004839 192 ----KRPYQIYCSIIGSTD-EDALLLEESN-ENVYVNIRHTKDFHFVCVHTFSTT--SSKVFLINAAD------PFSGLT 257 (728)
Q Consensus 192 ----~~~~~v~~~~l~t~~-~~~lv~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~--~~~l~~~dl~~------~~~~~~ 257 (728)
.++.+||++++++++ ++.+++++.+ ..+..++.|||||++|++.+.... .++||++|+++ +...++
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 346789999999986 5678877654 445678899999999999887543 57999999976 433577
Q ss_pred EeeecCCceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee-CCEEEEEEe
Q 004839 258 LIWECEGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC-KTHMALILR 336 (728)
Q Consensus 258 ~l~~~~~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~-~~~lv~~~~ 336 (728)
.+........+.++++|+.||+.++.+.. +++|+.++++ .+....|+.++++.+...+.++.++ ++++++..+
T Consensus 281 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~-----~~~l~~~d~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 281 KLIDNFEGEYDYVTNEGTVFTFKTNRHSP-----NYRLINIDFT-DPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp EEECSSSSCEEEEEEETTEEEEEECTTCT-----TCEEEEEETT-SCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE
T ss_pred EeeCCCCcEEEEEeccCCEEEEEECCCCC-----CCEEEEEeCC-CCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEE
Confidence 88877777777889999999999987642 5889999987 4333468998887655678889888 789999999
Q ss_pred cCCeeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCe--EEE
Q 004839 337 EGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGK--WNI 414 (728)
Q Consensus 337 ~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~--~~~ 414 (728)
.++..+|+++++.+++ ....+.+|..... +.+.+.+++.++|+++|+++|+++|.+|+.+++ .+.
T Consensus 355 ~~g~~~l~~~~~~~g~----------~~~~l~~~~~~v~---~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~ 421 (710)
T 2xdw_A 355 HDVKNTLQLHDLATGA----------LLKIFPLEVGSVV---GYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRV 421 (710)
T ss_dssp ETTEEEEEEEETTTCC----------EEEEECCCSSEEE---EEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEE
T ss_pred ECCEEEEEEEECCCCC----------EEEecCCCCceEE---EEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEE
Confidence 9999999999975432 0134555533211 122355788999999999999999999999988 777
Q ss_pred EEeeccccccccccccCccccccccccccCccccccccCCCCccCCCCCCceEEEEEEECCCCcEEEEEEEEcCCCCCCC
Q 004839 415 IQQQNMLRERTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYSCEQYDVPSHDGISVPLTIIYSPKYKKEN 494 (728)
Q Consensus 415 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~ 494 (728)
+++++++ .++ ...+.++++++++.||.+|++++++|++...++
T Consensus 422 l~~~~~~------------------------------~~~-------~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~ 464 (710)
T 2xdw_A 422 FREVTVK------------------------------GID-------ASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDG 464 (710)
T ss_dssp EEECCCT------------------------------TCC-------GGGEEEEEEEEECTTSCEEEEEEEEETTCCCSS
T ss_pred eeecccC------------------------------CcC-------ccccEEEEEEEEcCCCCEEEEEEEecCCCCCCC
Confidence 7765442 012 456789999999999999999999999876677
Q ss_pred CccEEEEEcCCCCCCcCcccHHHHHHHHH-CCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRSELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 573 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~~~~~l~~-~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 573 (728)
+.|+||++|||++....+.|....+.|++ +||+|+++|+||+|++|..|+..+...++.+.++|+++++++|++++++|
T Consensus 465 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~ 544 (710)
T 2xdw_A 465 SHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTS 544 (710)
T ss_dssp CSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCC
T ss_pred CccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCC
Confidence 89999999999988887888888888888 99999999999999999999999888888889999999999999999999
Q ss_pred CCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccc
Q 004839 574 EHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQ 653 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~ 653 (728)
++||+|+|+|+||++++++++++|++|+|+|+.+|++|+..++.. .....+..+||.|.+++.++.+.++||+.++.
T Consensus 545 ~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~ 621 (710)
T 2xdw_A 545 PKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKY---TIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVK 621 (710)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS---TTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCC
T ss_pred cceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhcccc---CCChhHHHhCCCCCCHHHHHHHHHhCcHhhhc
Confidence 999999999999999999999999999999999999998875432 12233556789987777888999999999998
Q ss_pred -----cCCCC-CeEEEEcCCCCCCCHHHHHHHHHHHHhC-------CCCCCCccEEE--EcCCCCCCCc-hhhhHHHHHH
Q 004839 654 -----KDVLY-PAVLVTSSFNTRFGVWEAAKWVARVRES-------TIYDPKRPILL--NLTTDIVEEN-RYLQCKESAL 717 (728)
Q Consensus 654 -----~~~~~-P~lli~g~~D~~Vp~~~~~~~~~~L~~~-------~~~~~~~~~~~--~~~~gH~~~~-~~~~~~~~~~ 717 (728)
+ +++ |+|++||..|.+||++++.+++++|++. + .++.+ ++++||++.. ..+..+..+.
T Consensus 622 ~~~~~~-~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 695 (710)
T 2xdw_A 622 LPEADD-IQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQN-----NPLLIHVDTKAGHGAGKPTAKVIEEVSD 695 (710)
T ss_dssp CCSSTT-CCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCC-----SCEEEEEESSCCSSTTCCHHHHHHHHHH
T ss_pred cccccc-CCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCC-----cCEEEEEeCCCCcCCCCCHHHHHHHHHH
Confidence 5 787 8999999999999999999999999987 4 34444 8999999876 5667888899
Q ss_pred HHHHHHHhhcC
Q 004839 718 ETAFLIKMMES 728 (728)
Q Consensus 718 ~~afl~~~l~~ 728 (728)
+++||.++|+.
T Consensus 696 ~~~fl~~~l~~ 706 (710)
T 2xdw_A 696 MFAFIARCLNI 706 (710)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHcCC
Confidence 99999999874
No 4
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=2.1e-70 Score=642.81 Aligned_cols=604 Identities=22% Similarity=0.310 Sum_probs=501.5
Q ss_pred chhhHHHHhCCCCCCCCCCCeEeCCeEEEEEccCCCeeEEEEEEecCCCcccccCCCCCCCccCCCCCCCcEEEeecccc
Q 004839 37 RWPLAWLLSFPLLPSAGAPGDLHHRRLYYRRVEEGKQYLVLCRRLVSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQE 116 (728)
Q Consensus 37 ~~~~~~~~~~r~~~~~~~~p~~~g~~~yy~~~~~g~e~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~ 116 (728)
+..+..-|+.+++.++.+.|.++|+++||.+..+|++++++||++..+ +.+++|+|+|.+
T Consensus 56 ~~~l~~~~~~~~~~~~~~~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~--------------------~~~~~l~d~~~~ 115 (695)
T 2bkl_A 56 REALAARFKELFYTDSVSTPSRRNGRFFYVRTHKDKEKAILYWRQGES--------------------GQEKVLLDPNGW 115 (695)
T ss_dssp HHHHHHHHHHHHSCCEECCCEEETTEEEEEEECTTCSSCEEEEEESTT--------------------SCCEEEECGGGS
T ss_pred HHHHHHHHHHhhccccCCCCEEECCEEEEEEEcCCCeEEEEEEEcCCC--------------------CCcEEEEchHHh
Confidence 344777888899999999999999999999999999999999987533 567899999999
Q ss_pred cccCCceEEeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCcee-ccCccc-eeeeEEEecCCCEEEEEEecCC---
Q 004839 117 AERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALC-SKPQAV-RVSNIAWAKDGQALIYVVTDQN--- 191 (728)
Q Consensus 117 ~~~~~~~~~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~-~~~~~~-~~~~~~WspDg~~l~y~~~~~~--- 191 (728)
++++ ...+..++|||||++|||+.+..|++..+|+++|+++|+.+ ...... ....++|||||+.|+|++.+..
T Consensus 116 a~~~--~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 116 SKDG--TVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSSS--CEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTS
T ss_pred ccCC--CEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCC
Confidence 8864 46789999999999999999999998999999999999976 322222 2378999999999999987654
Q ss_pred -----CCcceeEEEECCCCC-ceeEEeeecCc-ceEEEEEEcCCCCEEEEEEcCC-CceEEEEEeCCCCCCCeEEeeecC
Q 004839 192 -----KRPYQIYCSIIGSTD-EDALLLEESNE-NVYVNIRHTKDFHFVCVHTFST-TSSKVFLINAADPFSGLTLIWECE 263 (728)
Q Consensus 192 -----~~~~~v~~~~l~t~~-~~~lv~~~~~~-~~~~~~~~SpDg~~l~~~~~~~-~~~~l~~~dl~~~~~~~~~l~~~~ 263 (728)
.++.+||++++++++ ++++++++.+. .++.++.+||||++|++.+... ..++||+++..+ ++++.+....
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~--~~~~~l~~~~ 271 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE--KDFRLLVKGV 271 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC--SSCEEEEECS
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC--CceEEeecCC
Confidence 356789999999986 56788876554 4567889999999999998776 678999998765 5678888777
Q ss_pred CceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEE
Q 004839 264 GLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRL 343 (728)
Q Consensus 264 ~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l 343 (728)
....+.++++|+ ||+.++.+.. +++|+.++++ ......|+.++++.++..+.++.++++++++..+.++..+|
T Consensus 272 ~~~~~~~~~~g~-l~~~s~~~~~-----~~~l~~~d~~-~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l 344 (695)
T 2bkl_A 272 GAKYEVHAWKDR-FYVLTDEGAP-----RQRVFEVDPA-KPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEV 344 (695)
T ss_dssp SCCEEEEEETTE-EEEEECTTCT-----TCEEEEEBTT-BCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEE
T ss_pred CceEEEEecCCc-EEEEECCCCC-----CCEEEEEeCC-CCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEE
Confidence 766777778888 9999886532 5889999986 43334589998876667789999999999999999999999
Q ss_pred EEEecCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEeeccccc
Q 004839 344 CSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQQNMLRE 423 (728)
Q Consensus 344 ~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~~~~~~~~ 423 (728)
++++++++. ...+.+|+... +. +.+.+.+++.++|.++|+++|+.+|.+|+.+++.+.+++++..
T Consensus 345 ~~~~~~g~~-----------~~~l~~~~~~~-v~-~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~-- 409 (695)
T 2bkl_A 345 RVATLKGKP-----------VRTVQLPGVGA-AS-NLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVP-- 409 (695)
T ss_dssp EEEETTCCE-----------EEECCCSSSSE-EC-CCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCCS--
T ss_pred EEEeCCCCe-----------eEEecCCCCeE-EE-EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCC--
Confidence 999875211 23455653211 11 3344567889999999999999999999999998887765431
Q ss_pred cccccccCccccccccccccCccccccccCCCCccCCCCCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEc
Q 004839 424 RTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGH 503 (728)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~h 503 (728)
++ ...+.++.+.+++.||.+|++++++|++...+++.|+||++|
T Consensus 410 -----------------------------~~-------~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~h 453 (695)
T 2bkl_A 410 -----------------------------MN-------PEQYQVEQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGY 453 (695)
T ss_dssp -----------------------------SC-------GGGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECC
T ss_pred -----------------------------CC-------HHHCeEEEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEEC
Confidence 12 456789999999999999999999999876677899999999
Q ss_pred CCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeC
Q 004839 504 GAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYS 583 (728)
Q Consensus 504 Gg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S 583 (728)
||++....+.|....+.|+++||+|+++|+||+|++|..|+..+...++.+.++|+++++++|++++++|++||+|+|+|
T Consensus 454 Gg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S 533 (695)
T 2bkl_A 454 GGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGS 533 (695)
T ss_dssp CCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEET
T ss_pred CCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEEC
Confidence 99998877788888888999999999999999999999999998888888899999999999999999999999999999
Q ss_pred ccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCC--CCeE
Q 004839 584 AGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVL--YPAV 661 (728)
Q Consensus 584 ~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~--~P~l 661 (728)
|||++++++++++|++|+|+|+.+|++|+..+. ..+....+..+||.|.+++.++.+.++||+.++.+ ++ .|+|
T Consensus 534 ~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~-~~~~~P~L 609 (695)
T 2bkl_A 534 NGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYH---LFGSGRTWIPEYGTAEKPEDFKTLHAYSPYHHVRP-DVRYPALL 609 (695)
T ss_dssp HHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG---GSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCS-SCCCCEEE
T ss_pred HHHHHHHHHHHhCCcceEEEEEcCCccchhhcc---ccCCCcchHHHhCCCCCHHHHHHHHhcChHhhhhh-cCCCCCEE
Confidence 999999999999999999999999999987643 23444556677899987788889999999999986 55 6899
Q ss_pred EEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEE--EcCCCCCCCc-hhhhHHHHHHHHHHHHHhhcC
Q 004839 662 LVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEEN-RYLQCKESALETAFLIKMMES 728 (728)
Q Consensus 662 li~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~-~~~~~~~~~~~~afl~~~l~~ 728 (728)
++||..|.+||++++++++++|++++.. ..++.+ ++++||++.. ..+..+..+.+++||.++|+.
T Consensus 610 i~~G~~D~~v~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 677 (695)
T 2bkl_A 610 MMAADHDDRVDPMHARKFVAAVQNSPGN--PATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVLDV 677 (695)
T ss_dssp EEEETTCSSSCTHHHHHHHHHHHTSTTC--CSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEeeCCCCCCChHHHHHHHHHHHhhccC--CCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999984211 033444 8999999865 667788888999999999863
No 5
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=1.1e-69 Score=641.00 Aligned_cols=601 Identities=21% Similarity=0.257 Sum_probs=485.6
Q ss_pred hhhHHHHhCCCCCCCCCCCeEeCCeEEEEEccCCCeeEEEEEEecCCCcccccCCCCCCCccCCCCCCCcEEEeeccccc
Q 004839 38 WPLAWLLSFPLLPSAGAPGDLHHRRLYYRRVEEGKQYLVLCRRLVSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQEA 117 (728)
Q Consensus 38 ~~~~~~~~~r~~~~~~~~p~~~g~~~yy~~~~~g~e~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~ 117 (728)
..+...|..+++.++.+.|.++|+|+||.+..+|++++++||++... .+.+.+++|+|+|.++
T Consensus 96 ~~l~~~~~~~~~~~~~~~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~lld~~~l~ 158 (741)
T 1yr2_A 96 AALEKRMKALIDYERFGLPQRRGASVFYSWNSGLMNQSQLLVRPADA-----------------PVGTKGRVLLDPNTWA 158 (741)
T ss_dssp HHHHHHHHHHSCCCEECCCEEETTEEEEEEECSSCSSCEEEEEETTS-----------------CTTCCCEEEECGGGCC
T ss_pred HHHHHHHHHhhcccccCCCEEECCEEEEEEEcCCCeEEEEEEEcCCc-----------------cCCCCCEEEECHHHhc
Confidence 34667778889999999999999999999999999999999987531 0015678999999998
Q ss_pred ccCCceEEeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccc-eeeeEEEecCCCEEEEEEecCCC----
Q 004839 118 ERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAV-RVSNIAWAKDGQALIYVVTDQNK---- 192 (728)
Q Consensus 118 ~~~~~~~~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~---- 192 (728)
+++ ...+..++|||||++|||+.+..|++..+|+++|+++|+.+...... .+..++|||| +.|+|++.+...
T Consensus 159 ~~~--~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 159 KDG--ATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp ------EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred cCC--CEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccc
Confidence 763 46788999999999999999999999999999999999987654322 2468999999 999999866542
Q ss_pred -----CcceeEEEECCCCC-ceeEEeeecCc-ceEEEEEEcCCCCEEEEEEcCC--CceEEEEEeCCCCCCC-eEEeeec
Q 004839 193 -----RPYQIYCSIIGSTD-EDALLLEESNE-NVYVNIRHTKDFHFVCVHTFST--TSSKVFLINAADPFSG-LTLIWEC 262 (728)
Q Consensus 193 -----~~~~v~~~~l~t~~-~~~lv~~~~~~-~~~~~~~~SpDg~~l~~~~~~~--~~~~l~~~dl~~~~~~-~~~l~~~ 262 (728)
++.+||++++++++ ++.+++++.+. .++.++.|||||++|++.+.+. ..++||++|++++..+ ++.+...
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC
Confidence 26689999999886 56788877654 3567899999999999998765 4689999999874335 7788877
Q ss_pred CCceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeE
Q 004839 263 EGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYR 342 (728)
Q Consensus 263 ~~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~ 342 (728)
.....+.++++|+.||+.++.+.. +++|+.++++ .+. ..|+.++++.. ..+.++.++++++++..+.+|..+
T Consensus 316 ~~~~~~~~~~dg~~l~~~s~~~~~-----~~~l~~~d~~-~~~-~~~~~l~~~~~-~~l~~~~~~~~~lv~~~~~dg~~~ 387 (741)
T 1yr2_A 316 LKAQWDFVDGVGDQLWFVSGDGAP-----LKKIVRVDLS-GST-PRFDTVVPESK-DNLESVGIAGNRLFASYIHDAKSQ 387 (741)
T ss_dssp SSSCEEEEEEETTEEEEEECTTCT-----TCEEEEEECS-SSS-CEEEEEECCCS-SEEEEEEEEBTEEEEEEEETTEEE
T ss_pred CCceEEEEeccCCEEEEEECCCCC-----CCEEEEEeCC-CCc-cccEEEecCCC-CeEEEEEEECCEEEEEEEECCEEE
Confidence 766677778999999999997542 5889999987 332 47888886643 457888888999999999999999
Q ss_pred EEEEecCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEeecccc
Q 004839 343 LCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQQNMLR 422 (728)
Q Consensus 343 l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~~~~~~~ 422 (728)
|++++++++ ....+.+|+... +. +.+.+.+++.++|.++|+++|+++|.+|+.+++.+.++++..
T Consensus 388 l~~~~~~g~-----------~~~~l~~~~~~~-v~-~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~~~-- 452 (741)
T 1yr2_A 388 VLAFDLDGK-----------PAGAVSLPGIGS-AS-GLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPVHL-- 452 (741)
T ss_dssp EEEEETTSC-----------EEEECBCSSSCE-EE-EEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCCCC--
T ss_pred EEEEeCCCC-----------ceeeccCCCCeE-EE-EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCC--
Confidence 999987432 123455653211 11 223456788899999999999999999999988766654321
Q ss_pred ccccccccCccccccccccccCccccccccCCCCccCCCCCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEE
Q 004839 423 ERTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHG 502 (728)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~ 502 (728)
.|+ ...+.++++++++.||.+|++++++|++. +++.|+||++
T Consensus 453 -----------------------------~~~-------~~~~~~~~~~~~~~dg~~i~~~~~~p~~~--~~~~p~vl~~ 494 (741)
T 1yr2_A 453 -----------------------------TFD-------PADFRVEQVFYPSKDGTKVPMFIVRRKDA--KGPLPTLLYG 494 (741)
T ss_dssp -----------------------------SSC-------GGGEEEEEEEEECTTSCEEEEEEEEETTC--CSCCCEEEEC
T ss_pred -----------------------------CCC-------hhHCEEEEEEEEcCCCCEEEEEEEecCCC--CCCCcEEEEE
Confidence 112 45678999999999999999999999875 4678999999
Q ss_pred cCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEe
Q 004839 503 HGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGY 582 (728)
Q Consensus 503 hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~ 582 (728)
|||++....+.|....+.|+++||+|+++|+||+|++|..|+..+...++.+.++|+++++++|++++++|++||+|+|+
T Consensus 495 hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~ 574 (741)
T 1yr2_A 495 YGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGG 574 (741)
T ss_dssp CCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEE
T ss_pred CCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEE
Confidence 99998887788888888999999999999999999999999998888888889999999999999999999999999999
Q ss_pred CccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCC-CeE
Q 004839 583 SAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLY-PAV 661 (728)
Q Consensus 583 S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~-P~l 661 (728)
||||++++++++++|++|+|+|+.+|++|+..+. ..+....++.+||.|.+++.++.+.++||+.++.+.+++ |+|
T Consensus 575 S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~L 651 (741)
T 1yr2_A 575 SNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFD---QFTAGRYWVDDYGYPEKEADWRVLRRYSPYHNVRSGVDYPAIL 651 (741)
T ss_dssp THHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGG---GSTTGGGGHHHHCCTTSHHHHHHHHTTCGGGCCCTTSCCCEEE
T ss_pred CHHHHHHHHHHHhCchhheEEEecCCcccccccc---CCCCCchhHHHcCCCCCHHHHHHHHHcCchhhhhccCCCCCEE
Confidence 9999999999999999999999999999987643 233444566778999877888999999999998853675 899
Q ss_pred EEEcCCCCCCCHHHHHHHHHHHHh---CCCCCCCccEEE--EcCCCCCCCc-hhhhHHHHHHHHHHHHHhhc
Q 004839 662 LVTSSFNTRFGVWEAAKWVARVRE---STIYDPKRPILL--NLTTDIVEEN-RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 662 li~g~~D~~Vp~~~~~~~~~~L~~---~~~~~~~~~~~~--~~~~gH~~~~-~~~~~~~~~~~~afl~~~l~ 727 (728)
++||..|.+||++++.+++++|++ .+ .++.+ ++++||++.. ...+.+..+.+++||.++|+
T Consensus 652 i~~G~~D~~v~~~~~~~~~~~l~~~~~~g-----~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 718 (741)
T 1yr2_A 652 VTTADTDDRVVPGHSFKYTAALQTAAIGP-----KPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHFTG 718 (741)
T ss_dssp EEECSCCSSSCTHHHHHHHHHHHHSCCCS-----SCEEEEEC---------CHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeeCCCCCCChhHHHHHHHHHhhhhcCC-----CCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999998 55 34444 8899999766 56777888999999999986
No 6
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=5.1e-66 Score=594.67 Aligned_cols=611 Identities=17% Similarity=0.222 Sum_probs=484.1
Q ss_pred hHHHHhCCCCCC-CCCCCeEeCCeEEEEEccCCCeeEEEEEE-ecCCCcccccCCCCCCCccCCCCCCCcEEEeeccccc
Q 004839 40 LAWLLSFPLLPS-AGAPGDLHHRRLYYRRVEEGKQYLVLCRR-LVSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQEA 117 (728)
Q Consensus 40 ~~~~~~~r~~~~-~~~~p~~~g~~~yy~~~~~g~e~~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~ 117 (728)
+..-|...+..+ ..+.|.++|+|+|+.+.++.+++ .+||| ..+. ...++++.++|||+|+++
T Consensus 59 l~~~~~~~~~~~~ri~~p~~~g~~~y~f~~d~~~~~-gl~rrt~~~~---------------~~~~~p~wevllD~d~l~ 122 (711)
T 4hvt_A 59 IKKEIETIFYDQRKTPYGVIRKGYVYNFWMDDKNPQ-GLWRRTLVDN---------------YSKDKPNWEVLIDFDKLS 122 (711)
T ss_dssp HHHHHHHHHTCTTSCCCCEEETTEEEEEECCSSCSS-CEEEEEEHHH---------------HTSSSCCCEEEEEHHHHH
T ss_pred HHHHHHHHhccccccCCcEEECCEEEEEEecCCCCc-EEEEEccchh---------------cccCCCCcEEEecccccc
Confidence 344344444434 68889999999999999999999 55554 2211 011235789999999998
Q ss_pred ccCCceEEeecee-eCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCcc-c---------eeeeEEEecCCCEEEEE
Q 004839 118 ERFGGYAYEELSE-VSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA-V---------RVSNIAWAKDGQALIYV 186 (728)
Q Consensus 118 ~~~~~~~~~~~~~-~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~-~---------~~~~~~WspDg~~l~y~ 186 (728)
+..+-...+.+.. +||||+++||+.+.+|++...|+++|++|++.+..... . .++.++|. |++.+||.
T Consensus 123 ~~~g~~~~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~ 201 (711)
T 4hvt_A 123 KKIGKKVAYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFN 201 (711)
T ss_dssp HHHTSCEEEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEEC
T ss_pred ccCCCcEEEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEE
Confidence 7633136788888 99999999999999999999999999999998765433 1 22556998 66788886
Q ss_pred Eec------CCCCcceeEEEECCCCC-ceeEEeeecCcceEEEEEEcCCCCE----EEEEEc-CCCceEEEEEeCCCCCC
Q 004839 187 VTD------QNKRPYQIYCSIIGSTD-EDALLLEESNENVYVNIRHTKDFHF----VCVHTF-STTSSKVFLINAADPFS 254 (728)
Q Consensus 187 ~~~------~~~~~~~v~~~~l~t~~-~~~lv~~~~~~~~~~~~~~SpDg~~----l~~~~~-~~~~~~l~~~dl~~~~~ 254 (728)
+.. ....+.+||+|.+||+. ++.+||++.+..+++++..++|+++ +++... +...+++|++|++++.+
T Consensus 202 ~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 281 (711)
T 4hvt_A 202 LVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNL 281 (711)
T ss_dssp CCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSC
T ss_pred eCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCC
Confidence 422 12357799999999997 8899999888888888899999985 555544 33458999999886655
Q ss_pred CeEEeeecCCceEEEEeecCCEEEEEEcCC--ccCCCCCceEEEEeeCCCCCC-----CCCCeEEeecCCCceEEEEEee
Q 004839 255 GLTLIWECEGLAHCIVEHHEGFLYLFTDAA--KEGQEADNHYLLRCPVDASFP-----SRTWESVFIDDQGLVVEDVDFC 327 (728)
Q Consensus 255 ~~~~l~~~~~~~~~~~~~dg~~l~~~tn~~--~~~~~~~~~~l~~~~~~~~~~-----~~~~~~li~~~~~~~i~~~~~~ 327 (728)
++..+....+. . .++..++.||+.+..+ .......+++|+.++++ ++. ..+|+++++++++..|+++.++
T Consensus 282 ~~~~l~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 358 (711)
T 4hvt_A 282 KLQKINMPSDA-T-LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFT-DLLKTESDKTSLKILFTPTANEVFNFISTT 358 (711)
T ss_dssp EEEECCSCTTC-E-EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGG-GGGSCGGGCTTCEEEECCCTTEEEEEEEEC
T ss_pred cceEeecCCcc-e-EeeeECCEEEEEECcccccccccCCCCeEEEEECC-cccccccccccceEEECCCCCCeEEEEEEE
Confidence 55555332221 1 2456678899977443 10011236789999987 432 3579998888888999999999
Q ss_pred CCEEEEEEecCCeeEEEEEecCCCCCCcceeeccccccc-ccCCCc-eeeeecCCCccCCCcEEEEEEccCCCCceEEEE
Q 004839 328 KTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHF-LPLPKY-VSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDY 405 (728)
Q Consensus 328 ~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~-~~~p~~-~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~ 405 (728)
+++|++....+|.++|+++++.++. + .... +++|+. ..++. +.+.+++.+++.++|+++|+++|.+
T Consensus 359 ~~~l~~~~~~~~~~~l~~~~~~~g~------~---~~~~~i~lp~~~~~~~~---~~~~~~~~~~~~~ss~~~P~~~~~~ 426 (711)
T 4hvt_A 359 KDRVFLATYDNVVAKVVTFTLENEQ------W---TKPVVLKLPYQNAIFGM---SSYEEEEEALITIENSIVPPTIYLW 426 (711)
T ss_dssp SSCEEEEEEETTEEEEEEECEETTE------E---CCCEEECCCSTTCEEEE---ECCTTCSCEEEEEECSSSCCEEEEE
T ss_pred CCEEEEEEEECCEEEEEEEECCCCc------e---EEEeccCCCCCeEEEEE---eecCcCCEEEEEEecCCCCCEEEEE
Confidence 9999999999999999999875431 1 1123 566642 22222 2346778899999999999999999
Q ss_pred ECCCCeEEEEEeeccccccccccccCccccccccccccCccccccccCCCCccCCCCCCceEEEEEEECCCCcEEEEEEE
Q 004839 406 DLSYGKWNIIQQQNMLRERTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYSCEQYDVPSHDGISVPLTII 485 (728)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~ 485 (728)
|+. ++.+.++..+.. ++ +..+.++++++++.||.+|+++++
T Consensus 427 d~~-~~~~~l~~~~~~-------------------------------~~-------~~~~~~e~v~~~s~DG~~i~~~l~ 467 (711)
T 4hvt_A 427 VKT-HELKIIRKALYS-------------------------------FD-------SENYVLEQKEATSFDGVKIPYFLV 467 (711)
T ss_dssp CTT-SCEEEEECCSSC-------------------------------CC-------GGGEEEEEEEEECTTSCEEEEEEE
T ss_pred eCC-CcEEEEecCCcc-------------------------------cC-------cccCeeEEEEEECCCCeEEEEEEE
Confidence 998 777777654321 11 345689999999999999999999
Q ss_pred EcCCCCCCCCccEEEEEcCCCCCCcCcccHHHH-HHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHH
Q 004839 486 YSPKYKKENQNPGLLHGHGAYGELLDKRWRSEL-KSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCAR 564 (728)
Q Consensus 486 ~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~-~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~ 564 (728)
+|++.+.+++.|+||++|||++....+.|.... +.|+++||+|+++|+||+|+||..|++.+...++...++|++++++
T Consensus 468 ~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~ 547 (711)
T 4hvt_A 468 YKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSE 547 (711)
T ss_dssp EETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHH
T ss_pred ecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHH
Confidence 999876678899999999999988888888766 5999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHH
Q 004839 565 FLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIR 644 (728)
Q Consensus 565 ~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 644 (728)
||++++++|++||+|+|+|+||++++++++++|++|+|+|+.+|++|+..+.. ......+..+||+|.+++.++.+.
T Consensus 548 ~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~---~~~~~~~~~~~G~p~~~~~~~~l~ 624 (711)
T 4hvt_A 548 ELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKE---FGAGHSWVTEYGDPEIPNDLLHIK 624 (711)
T ss_dssp HHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGG---STTGGGGHHHHCCTTSHHHHHHHH
T ss_pred HHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhc---cccchHHHHHhCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999886542 222334557789998888889999
Q ss_pred ccCcccccccCCCC--CeEEEEcCCCCCCCHHHHHHHHHHH-HhCCCCCCCccEEEEcCCCCCCCc-hhhhHHHHHHHHH
Q 004839 645 NYSPYDNIQKDVLY--PAVLVTSSFNTRFGVWEAAKWVARV-RESTIYDPKRPILLNLTTDIVEEN-RYLQCKESALETA 720 (728)
Q Consensus 645 ~~sP~~~i~~~~~~--P~lli~g~~D~~Vp~~~~~~~~~~L-~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~a 720 (728)
++||+.++.+ ++. |+|++||..|++||+.++.+++++| ++++++ ..+.+++++||++.. ..+.+...+.+++
T Consensus 625 ~~SP~~~v~~-i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~p---v~l~~~p~~gHg~~~~~~~~~~~~~~i~~ 700 (711)
T 4hvt_A 625 KYAPLENLSL-TQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTK---TYFLESKDSGHGSGSDLKESANYFINLYT 700 (711)
T ss_dssp HHCGGGSCCT-TSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCC---EEEEEESSCCSSSCSSHHHHHHHHHHHHH
T ss_pred HcCHHHHHhh-cCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCC---EEEEEECCCCCcCcCCcchHHHHHHHHHH
Confidence 9999999987 676 8899999999999999999999999 998843 222228999999866 6778888889999
Q ss_pred HHHHhhcC
Q 004839 721 FLIKMMES 728 (728)
Q Consensus 721 fl~~~l~~ 728 (728)
||.++|++
T Consensus 701 FL~~~Lg~ 708 (711)
T 4hvt_A 701 FFANALKL 708 (711)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhCC
Confidence 99999974
No 7
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=1.8e-49 Score=462.67 Aligned_cols=518 Identities=13% Similarity=0.066 Sum_probs=384.4
Q ss_pred CCCCCE-EEEEEEcCCCcEEEEEEEECC--C-CceeccCc------cceeeeEEEecCCCEEEEEEecCC-----CCcce
Q 004839 132 SPDHKF-LAYTMYDKDNDYFTLSVRNLN--S-GALCSKPQ------AVRVSNIAWAKDGQALIYVVTDQN-----KRPYQ 196 (728)
Q Consensus 132 SPDG~~-lA~~~~~~g~e~~~l~v~dl~--t-g~~~~~~~------~~~~~~~~WspDg~~l~y~~~~~~-----~~~~~ 196 (728)
||||++ |||+.+.. .+||++++. + ++...++. ......++|||||+.|+|++.+.. ....+
T Consensus 87 SPDg~~~la~~~~~~----~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 87 RPAGGPLLVFTHFGD----QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp CSSSSCEEEEEBTTT----CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEE
T ss_pred ecCCCeEEEEEECCC----CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeE
Confidence 499999 99986542 359999998 5 77666654 235678999999999999976521 23368
Q ss_pred eEEEECCC------CCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCC-----CceEEEEEeCC-CCC-CCeEEeeecC
Q 004839 197 IYCSIIGS------TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFST-----TSSKVFLINAA-DPF-SGLTLIWECE 263 (728)
Q Consensus 197 v~~~~l~t------~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~-----~~~~l~~~dl~-~~~-~~~~~l~~~~ 263 (728)
||++++.+ +.. ..+. +....+...+.|||||++|++.+... ..++||++|++ ++. .+.+.+....
T Consensus 163 i~~~~~~~~~~~~~~~~-~~l~-~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAV-RELS-DDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEETTSTTTTCGGGS-EESS-CSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred EEEEECCCCccccCCce-eEEE-ecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 99999987 432 3333 11223455688999999999988654 34789999998 421 1455666542
Q ss_pred -Cc-eEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCc-------eEEEEEee-CCEEEE
Q 004839 264 -GL-AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGL-------VVEDVDFC-KTHMAL 333 (728)
Q Consensus 264 -~~-~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~-------~i~~~~~~-~~~lv~ 333 (728)
.. ....+++||+ +++.++.++ ..+|++++++ .++++.++....+. .+..+.+. ++.+++
T Consensus 241 ~~~~~~~~~spdg~-l~~~~~~~~------~~~l~~~~~~----~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 241 EEAIAQAEWAPDGS-LIVATDRTG------WWNLHRVDPA----TGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp TBCEEEEEECTTSC-EEEEECTTS------SCEEEEECTT----TCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred CceEcceEECCCCe-EEEEECCCC------CeEEEEEECC----CCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 22 3345678888 888887653 3579998874 24455544332111 12345554 567888
Q ss_pred EEecCCeeEEEEEecCCCCCCcceeecccccccccCCCc-eeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeE
Q 004839 334 ILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKY-VSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKW 412 (728)
Q Consensus 334 ~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~-~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~ 412 (728)
.... +..+|+.+++++++ + ..+..+.. +..+ .+++++.+++..++...|.++|.+|+.+++.
T Consensus 310 ~~~~-~~~~l~~~d~~~~~------~-----~~l~~~~~~~~~~-----~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 310 VHGK-GAAVLGILDPESGE------L-----VDAAGPWTEWAAT-----LTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp EEBS-SSCEEEEEETTTTE------E-----EECCSSCCEEEEE-----EEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEc-CccEEEEEECCCCc------E-----EEecCCCCeEEEE-----EecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 8888 88999999976432 1 22333322 1111 0456788999999999999999999999998
Q ss_pred EEEEeeccccccccccccCccccccccccccCccccccccCCCCccCCCCCCceEEEEEEECCCCcEEEEEEEEcCCCC-
Q 004839 413 NIIQQQNMLRERTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYSCEQYDVPSHDGISVPLTIIYSPKYK- 491 (728)
Q Consensus 413 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~- 491 (728)
+.|+..+... ........++.+.+++.||.+|+++++.|++..
T Consensus 373 ~~l~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~ 416 (662)
T 3azo_A 373 RTIGARHTDP------------------------------------VDPAYYPEPQIRTFTAPDGREIHAHIYPPHSPDF 416 (662)
T ss_dssp EEEESCCCCS------------------------------------SCGGGSCCCEEEEEECTTSCEEEEEEECCCCSSE
T ss_pred EEeecCCccc------------------------------------CCccccCcceEEEEEcCCCCEEEEEEECCCCccc
Confidence 8877544210 011233457888999999999999999998754
Q ss_pred ---CCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHH
Q 004839 492 ---KENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIE 568 (728)
Q Consensus 492 ---~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 568 (728)
++++.|+||++||+++......|....+.|+++||+|+.+|+||++++|..|.......++...++|+.+++++|++
T Consensus 417 ~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 496 (662)
T 3azo_A 417 TGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAE 496 (662)
T ss_dssp ECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHH
T ss_pred cCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHH
Confidence 45678999999999887766678888999999999999999999999999999877777777789999999999999
Q ss_pred cCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCccccc--ccCCCCCHHHHHHHHcc
Q 004839 569 KEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYE--EFGYPGDIDDFHAIRNY 646 (728)
Q Consensus 569 ~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~--~~g~p~~~~~~~~~~~~ 646 (728)
++.+|++||+|+|+||||+++++++.+ |++|+++|+.+|+.|+..++........ ..+. .+|.+. +..+.+.++
T Consensus 497 ~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~ 572 (662)
T 3azo_A 497 EGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADGGTHDFE-SRYLDFLIGSFE--EFPERYRDR 572 (662)
T ss_dssp TTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTTCSCGGG-TTHHHHHTCCTT--TCHHHHHHT
T ss_pred cCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhcccccchh-hHhHHHHhCCCc--cchhHHHhh
Confidence 999999999999999999999999986 9999999999999998765431111111 1111 235432 245678889
Q ss_pred CcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 004839 647 SPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMM 726 (728)
Q Consensus 647 sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l 726 (728)
||+.++.+ +++|+|++||..|.+||+.++++++++|++.+++ ..+.+++++||++.......+....+++||.++|
T Consensus 573 sp~~~~~~-~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~---~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 648 (662)
T 3azo_A 573 APLTRADR-VRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVP---HAYLSFEGEGHGFRRKETMVRALEAELSLYAQVF 648 (662)
T ss_dssp CGGGGGGG-CCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCC---EEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHT
T ss_pred ChHhHhcc-CCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCC---EEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHh
Confidence 99999987 8999999999999999999999999999998753 2333389999997655566677788899999998
Q ss_pred c
Q 004839 727 E 727 (728)
Q Consensus 727 ~ 727 (728)
+
T Consensus 649 ~ 649 (662)
T 3azo_A 649 G 649 (662)
T ss_dssp T
T ss_pred C
Confidence 6
No 8
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=3.6e-46 Score=440.35 Aligned_cols=526 Identities=14% Similarity=0.100 Sum_probs=372.6
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccce--------------------eeeEEEecCCCEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVR--------------------VSNIAWAKDGQALI 184 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~--------------------~~~~~WspDg~~l~ 184 (728)
.+..++|||||++|||+.+ + +||++|+++|+..+++..+. ...+.|||||+.|+
T Consensus 113 ~~~~~~~SPdG~~la~~~~--~----~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la 186 (740)
T 4a5s_A 113 NTQWVTWSPVGHKLAYVWN--N----DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLA 186 (740)
T ss_dssp TEEEEEECSSTTCEEEEET--T----EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEE
T ss_pred cceeeEECCCCCEEEEEEC--C----eEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEE
Confidence 3567899999999999953 2 59999999998777654211 12488999999999
Q ss_pred EEEecCCC-------------------------------CcceeEEEECCC---CC---ceeEEeee---cCcceEEEEE
Q 004839 185 YVVTDQNK-------------------------------RPYQIYCSIIGS---TD---EDALLLEE---SNENVYVNIR 224 (728)
Q Consensus 185 y~~~~~~~-------------------------------~~~~v~~~~l~t---~~---~~~lv~~~---~~~~~~~~~~ 224 (728)
|.+.+... ...+|+++++.+ ++ ...+.... ....+...+.
T Consensus 187 ~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 266 (740)
T 4a5s_A 187 YAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVT 266 (740)
T ss_dssp EEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEE
T ss_pred EEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEE
Confidence 99765431 012588889887 62 21221110 1334556889
Q ss_pred EcCCCCEEEEEEcCC-CceEEEEEeCCCCCC------CeEEeeecCC-c------eEEEEeecCCEEE-EEEcCCccCCC
Q 004839 225 HTKDFHFVCVHTFST-TSSKVFLINAADPFS------GLTLIWECEG-L------AHCIVEHHEGFLY-LFTDAAKEGQE 289 (728)
Q Consensus 225 ~SpDg~~l~~~~~~~-~~~~l~~~dl~~~~~------~~~~l~~~~~-~------~~~~~~~dg~~l~-~~tn~~~~~~~ 289 (728)
|||||+.+++..++. ....|+++|++++.. ..+.+..... . ....+++||+.|+ +.++.++
T Consensus 267 wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G---- 342 (740)
T 4a5s_A 267 WATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG---- 342 (740)
T ss_dssp EEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS----
T ss_pred EeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC----
Confidence 999999887777665 347899999987431 1122222221 1 1345689999887 6666554
Q ss_pred CCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEec----CCeeEEEEEecCCCCCCcceeecccccc
Q 004839 290 ADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILRE----GRTYRLCSVSLPLPAGKGVVHLKELHPH 365 (728)
Q Consensus 290 ~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~----~g~~~l~~~~l~~~~~~~~~~~~~~~~~ 365 (728)
...|+.++++ . +..+.|.....+ ...-+.+.++.|++.... .+..+|++++++++. ....+.
T Consensus 343 --~~~l~~~~~~-~---~~~~~lT~g~~~-v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~--~~~~lt----- 408 (740)
T 4a5s_A 343 --YRHICYFQID-K---KDCTFITKGTWE-VIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYT--KVTCLS----- 408 (740)
T ss_dssp --CEEEEEEETT-C---SSCEESCCSSSC-EEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEE--EEEESS-----
T ss_pred --ceEEEEEECC-C---CceEecccCCEE-EEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCC--cceeec-----
Confidence 3678888876 2 233434333222 122233447888888876 456789999876421 000111
Q ss_pred cccC---CCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEeeccccccccccccCccccccccccc
Q 004839 366 FLPL---PKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQQNMLRERTRILYGTASSATISLNAK 442 (728)
Q Consensus 366 ~~~~---p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (728)
..+ .....+ .+++.++..+++.++++. |+.++.++..+++...+...+....
T Consensus 409 -~~~~~~~~~~~~----~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~~~~~l~~n~~~~------------------- 463 (740)
T 4a5s_A 409 -CELNPERCQYYS----VSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDKGLRVLEDNSALD------------------- 463 (740)
T ss_dssp -TTTSTTTBCBEE----EEECTTSSEEEEEECSBS-SCEEEEEETTTTEEEEEEECCHHHH-------------------
T ss_pred -cccCCCCCceEE----EEECCCCCEEEEEeCCCC-CCEEEEEECCCCcEEEEeccChhhh-------------------
Confidence 111 112222 235678899999999998 8899999998887655443321000
Q ss_pred cCccccccccCCCCccCCCCCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCc-CcccH-HHHHH
Q 004839 443 SGESVNELKSDSDNLWNDLSEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELL-DKRWR-SELKS 520 (728)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~-~~~~~-~~~~~ 520 (728)
..+........+.+.+ ..||.+|+++++.|+++.+.+++|+||++|||++... ...|. .....
T Consensus 464 --------------~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~ 528 (740)
T 4a5s_A 464 --------------KMLQNVQMPSKKLDFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATY 528 (740)
T ss_dssp --------------HHHTTEECCEEEEEEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHH
T ss_pred --------------hhhhhccCCccEEEEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHH
Confidence 0001123345677777 7899999999999998777788999999999987642 23333 23345
Q ss_pred HH-HCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCc
Q 004839 521 LL-DRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDL 599 (728)
Q Consensus 521 l~-~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~ 599 (728)
|+ ++||+|+++|+||+|++|..|.......++...++|+.+++++|++++++|++||+|+|+||||+++++++.++|++
T Consensus 529 l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~ 608 (740)
T 4a5s_A 529 LASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGV 608 (740)
T ss_dssp HHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSC
T ss_pred HHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCc
Confidence 55 59999999999999999999998888888888899999999999999999999999999999999999999999999
Q ss_pred eeEEEEeCCcccchhhccCCCCCCCcccccc--cCCCCCHHHHHHHHccCcccccccCCCC-CeEEEEcCCCCCCCHHHH
Q 004839 600 FRAVVLEVPFLDATNTLLYPILPLIAADYEE--FGYPGDIDDFHAIRNYSPYDNIQKDVLY-PAVLVTSSFNTRFGVWEA 676 (728)
Q Consensus 600 f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~--~g~p~~~~~~~~~~~~sP~~~i~~~~~~-P~lli~g~~D~~Vp~~~~ 676 (728)
|+++|+.+|+.|+..+. ..+.+ ++.|...+..+.+...+|+.++.+ ++. |+|++||..|.+||+.++
T Consensus 609 ~~~~v~~~p~~~~~~~~---------~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-i~~~P~Lii~G~~D~~v~~~~~ 678 (740)
T 4a5s_A 609 FKCGIAVAPVSRWEYYD---------SVYTERYMGLPTPEDNLDHYRNSTVMSRAEN-FKQVEYLLIHGTADDNVHFQQS 678 (740)
T ss_dssp CSEEEEESCCCCGGGSB---------HHHHHHHHCCSSTTTTHHHHHHSCSGGGGGG-GGGSEEEEEEETTCSSSCTHHH
T ss_pred eeEEEEcCCccchHHhh---------hHHHHHHcCCCCccccHHHHHhCCHHHHHhc-CCCCcEEEEEcCCCCccCHHHH
Confidence 99999999999876321 11221 366633345677889999999887 776 899999999999999999
Q ss_pred HHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 677 AKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 677 ~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
.+++++|++++++ ..+.+++++||++............+.+||.++|+
T Consensus 679 ~~l~~~l~~~g~~---~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 726 (740)
T 4a5s_A 679 AQISKALVDVGVD---FQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726 (740)
T ss_dssp HHHHHHHHHTTCC---CEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCC---eEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcC
Confidence 9999999998864 23333899999985544555566778999999985
No 9
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=1.8e-43 Score=415.30 Aligned_cols=512 Identities=13% Similarity=0.124 Sum_probs=365.8
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCC-----CceeccCccc-e---------------eeeEEEecCCCEEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS-----GALCSKPQAV-R---------------VSNIAWAKDGQALI 184 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~t-----g~~~~~~~~~-~---------------~~~~~WspDg~~l~ 184 (728)
+..++|||||++|||+. ++ +|+++|+++ |+...++... . ...+.|||||+.|+
T Consensus 123 ~~~~~~SpdG~~la~~~--~~----~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la 196 (706)
T 2z3z_A 123 TASLDFSPVGDRVAYVR--NH----NLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLA 196 (706)
T ss_dssp CTTCEECTTSSEEEEEE--TT----EEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEE
T ss_pred ccCCcCCCCCCEEEEEE--CC----eEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEE
Confidence 56789999999999974 22 499999999 8877655421 1 37899999999999
Q ss_pred EEEecCC----------------------------CCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEE
Q 004839 185 YVVTDQN----------------------------KRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHT 236 (728)
Q Consensus 185 y~~~~~~----------------------------~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 236 (728)
|.+.+.. ....+|+++|+.++....+............+.|||||++|++.+
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 9875432 123579999998764222221112223446789999999998876
Q ss_pred cCC--CceEEEEEeCCCCCCCeEEeeecCCc------eEEEEee--cCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCC
Q 004839 237 FST--TSSKVFLINAADPFSGLTLIWECEGL------AHCIVEH--HEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPS 306 (728)
Q Consensus 237 ~~~--~~~~l~~~dl~~~~~~~~~l~~~~~~------~~~~~~~--dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~ 306 (728)
... ....|+++|+.++. ..+.+...... ....+++ ||+ +++.++.++ ..+|+.++.+ .
T Consensus 277 ~~~~~~~~~v~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g------~~~l~~~~~~----~ 344 (706)
T 2z3z_A 277 VNRAQNECKVNAYDAETGR-FVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDG------WNHLYLYDTT----G 344 (706)
T ss_dssp ECTTSCEEEEEEEETTTCC-EEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTS------SCEEEEEETT----S
T ss_pred eCCCCCeeEEEEEECCCCc-eeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccCC------ccEEEEEECC----C
Confidence 543 33689999998731 34444322111 1235667 666 555666543 3678888754 1
Q ss_pred CCCeEEeecCCCceEE---EEEeeCCEEEEEEecCC--eeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCC
Q 004839 307 RTWESVFIDDQGLVVE---DVDFCKTHMALILREGR--TYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPN 381 (728)
Q Consensus 307 ~~~~~li~~~~~~~i~---~~~~~~~~lv~~~~~~g--~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~ 381 (728)
+..+.+..+ ...+. .+...++.|++....++ ..+|+.+++.+++ ...+.....+..+ .
T Consensus 345 ~~~~~l~~~--~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-----------~~~l~~~~~~~~~----~ 407 (706)
T 2z3z_A 345 RLIRQVTKG--EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-----------TKDLTPESGMHRT----Q 407 (706)
T ss_dssp CEEEECCCS--SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-----------CEESCCSSSEEEE----E
T ss_pred CEEEecCCC--CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-----------ceeccCCCceEEE----E
Confidence 223333322 22233 33334567888877665 4688988876532 1122222223322 3
Q ss_pred ccCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEeeccccccccccccCccccccccccccCccccccccCCCCccCCC
Q 004839 382 YDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQQNMLRERTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDL 461 (728)
Q Consensus 382 ~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (728)
+++|+..+++..++...|++++.+|+.+++.+.++..+.. ..
T Consensus 408 ~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~~~~~~~~~~--------------------------------------~~ 449 (706)
T 2z3z_A 408 LSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKNPD--------------------------------------TG 449 (706)
T ss_dssp ECTTSSEEEEEEECSSCSCEEEEEESSSCEEEEEECC-------------------------------------------
T ss_pred ECCCCCEEEEEecCCCCCcEEEEEECCCCeEeeccccchh--------------------------------------hh
Confidence 5678899999999999999999999988874333322110 00
Q ss_pred CCCceEEEEEEECCCC-cEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcC-cccHH----HHHHHHHCCeEEEEEcCCC
Q 004839 462 SEFYSCEQYDVPSHDG-ISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLD-KRWRS----ELKSLLDRGWVVAFADVRG 535 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG-~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~----~~~~l~~~Gy~v~~~d~RG 535 (728)
......+.+.+++.|| .+++++++.|+++.+++++|+||++|||++.... ..|.. ..+.|+++||+|+++|+||
T Consensus 450 ~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG 529 (706)
T 2z3z_A 450 YAMPEIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRG 529 (706)
T ss_dssp -CCCCEEEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTT
T ss_pred cCCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCC
Confidence 2345678899999999 9999999999887666788999999998876532 34554 5788999999999999999
Q ss_pred CCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhh
Q 004839 536 GGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNT 615 (728)
Q Consensus 536 ~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~ 615 (728)
+|++|..|.......++...++|+.+++++|.+++.+|++|++|+|+||||++++.++.++|++|+++|+.+|+.++..+
T Consensus 530 ~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~ 609 (706)
T 2z3z_A 530 SANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRY 609 (706)
T ss_dssp CSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGS
T ss_pred CcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHH
Confidence 99999988877777777778899999999999999999999999999999999999999999999999999999887531
Q ss_pred ccCCCCCCCccccc--ccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCc
Q 004839 616 LLYPILPLIAADYE--EFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKR 693 (728)
Q Consensus 616 ~~~~~~~~~~~~~~--~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~ 693 (728)
. ..+. .++.|.. ..+.+...+|..++.+ ++.|+|++||..|.+||+.++++++++|+.++++ .
T Consensus 610 ~---------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~---~ 674 (706)
T 2z3z_A 610 A---------IMYGERYFDAPQE--NPEGYDAANLLKRAGD-LKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTY---P 674 (706)
T ss_dssp B---------HHHHHHHHCCTTT--CHHHHHHHCGGGGGGG-CCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCC---C
T ss_pred H---------hhhhhhhcCCccc--ChhhhhhCCHhHhHHh-CCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCC---e
Confidence 1 0111 1255543 3455778899998887 8999999999999999999999999999988754 2
Q ss_pred cEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 004839 694 PILLNLTTDIVEENRYLQCKESALETAFLIKMM 726 (728)
Q Consensus 694 ~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l 726 (728)
.+.+++++||+.... ........+.+||.++|
T Consensus 675 ~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 675 DYYVYPSHEHNVMGP-DRVHLYETITRYFTDHL 706 (706)
T ss_dssp EEEEETTCCSSCCTT-HHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCCCCCCcc-cHHHHHHHHHHHHHHhC
Confidence 333389999987543 44455667789999876
No 10
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.9e-43 Score=415.69 Aligned_cols=517 Identities=13% Similarity=0.107 Sum_probs=370.3
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccce------------------eeeEEEecCCCEEEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVR------------------VSNIAWAKDGQALIYV 186 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~------------------~~~~~WspDg~~l~y~ 186 (728)
.+..++|||||++|||..+ + +|+++|+++|+...++.... ...+.|||||+.|+|.
T Consensus 153 ~~~~~~~SPDG~~la~~~~--~----~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~ 226 (741)
T 2ecf_A 153 FATDAKLSPKGGFVSFIRG--R----NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYA 226 (741)
T ss_dssp CEEEEEECTTSSEEEEEET--T----EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEE
T ss_pred ccccccCCCCCCEEEEEeC--C----cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEE
Confidence 4667899999999999863 2 59999999998776654211 3679999999999998
Q ss_pred EecCCC----------------------------CcceeEEEECCC-CCceeEEeeecCcceEEEEEEcCCCCEEEEEEc
Q 004839 187 VTDQNK----------------------------RPYQIYCSIIGS-TDEDALLLEESNENVYVNIRHTKDFHFVCVHTF 237 (728)
Q Consensus 187 ~~~~~~----------------------------~~~~v~~~~l~t-~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~ 237 (728)
..+... ....|+.+++.+ ++...+............+.| |||++|++...
T Consensus 227 ~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~ 305 (741)
T 2ecf_A 227 RIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQ 305 (741)
T ss_dssp EEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEE
T ss_pred EEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEe
Confidence 765421 122788899887 653322221122334567899 99999998875
Q ss_pred CC--CceEEEEEeCCCCCCCeEEeeecCCc------eEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCC
Q 004839 238 ST--TSSKVFLINAADPFSGLTLIWECEGL------AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTW 309 (728)
Q Consensus 238 ~~--~~~~l~~~dl~~~~~~~~~l~~~~~~------~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~ 309 (728)
.. ....|+++|+++ ++.+.+...... ....+++||+ +++.++.++ ..+|+.++.+ +..
T Consensus 306 ~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g------~~~l~~~~~~-----~~~ 371 (741)
T 2ecf_A 306 SRDQKKLDLVEVTLAS--NQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTG------FQHLYRIDSK-----GKA 371 (741)
T ss_dssp ETTSSEEEEEEEETTT--CCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTS------SCEEEEECSS-----SCE
T ss_pred cccCCeEEEEEEECCC--CceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCC------ccEEEEEcCC-----CCe
Confidence 32 357899999988 445554433221 1345678888 666666543 3678888765 224
Q ss_pred eEEeecCCCceEEE---EEeeCCEEEEEEecCC--eeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCccC
Q 004839 310 ESVFIDDQGLVVED---VDFCKTHMALILREGR--TYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDY 384 (728)
Q Consensus 310 ~~li~~~~~~~i~~---~~~~~~~lv~~~~~~g--~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~ 384 (728)
..+..++ ..+.. +...++.|++....++ ..+|+.++..... ...+.....+.++ .+++
T Consensus 372 ~~l~~~~--~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~-----------~~~l~~~~~~~~~----~~sp 434 (741)
T 2ecf_A 372 AALTHGN--WSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQ-----------PQRLSKAPGMHSA----SFAR 434 (741)
T ss_dssp EESCCSS--SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCC-----------CEECCCSCSEEEE----EECT
T ss_pred eeeeecc--eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCC-----------eeecccCCCceEE----EECC
Confidence 4443332 33333 4444568888887776 5567777654221 1122222223322 3567
Q ss_pred CCcEEEEEEccCCCCceEEEEECCCCeEEEEEeecc-ccccccccccCccccccccccccCccccccccCCCCccCCCC-
Q 004839 385 YSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQQNM-LRERTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLS- 462 (728)
Q Consensus 385 ~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 462 (728)
|++.+++.++++..|+++|.++..++..+.+..... ..+ .++...
T Consensus 435 dg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~---------------------------------~~~~~~~ 481 (741)
T 2ecf_A 435 NASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPK---------------------------------HPYARYR 481 (741)
T ss_dssp TSSEEEEEEEETTEEEEEEEEETTSCEEECSSCCCSSSTT---------------------------------STTHHHH
T ss_pred CCCEEEEEecCCCCCCeEEEEEcCCCeEEEeccCcccccc---------------------------------cchhhhh
Confidence 899999999999999999999987665443322110 000 000001
Q ss_pred -CCceEEEEEEECCCC-cEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCc-CcccH-----HHHHHHHHCCeEEEEEcCC
Q 004839 463 -EFYSCEQYDVPSHDG-ISVPLTIIYSPKYKKENQNPGLLHGHGAYGELL-DKRWR-----SELKSLLDRGWVVAFADVR 534 (728)
Q Consensus 463 -~~~~~~~~~~~s~dG-~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~-~~~~~-----~~~~~l~~~Gy~v~~~d~R 534 (728)
.....+.+.+++.|| ..|+++++.|++..++++.|+||++||+++... ...|. ...+.|+++||+|+++|+|
T Consensus 482 ~~~~~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r 561 (741)
T 2ecf_A 482 EAQRPVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNR 561 (741)
T ss_dssp TTCCCEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCT
T ss_pred ccCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecC
Confidence 345789999999999 999999999987655667899999999877642 23344 5678899999999999999
Q ss_pred CCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchh
Q 004839 535 GGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN 614 (728)
Q Consensus 535 G~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~ 614 (728)
|+|++|..|.......++...++|+.+++++|.+++.+|++||+++|+||||++++.++.++|++|+++|+.+|+.++..
T Consensus 562 G~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 641 (741)
T 2ecf_A 562 GTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGL 641 (741)
T ss_dssp TCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGG
T ss_pred CCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhh
Confidence 99999988887777777777899999999999999889999999999999999999999999999999999999988652
Q ss_pred hccCCCCCCCccccc-ccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCc
Q 004839 615 TLLYPILPLIAADYE-EFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKR 693 (728)
Q Consensus 615 ~~~~~~~~~~~~~~~-~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~ 693 (728)
+. ..... .++.|.. ..+.+...+|+.++.+ ++.|+|++||..|.+||+.++.+++++|+..+++ .
T Consensus 642 ~~--------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~---~ 707 (741)
T 2ecf_A 642 YD--------SHYTERYMDLPAR--NDAGYREARVLTHIEG-LRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQP---F 707 (741)
T ss_dssp SB--------HHHHHHHHCCTGG--GHHHHHHHCSGGGGGG-CCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCC---C
T ss_pred hc--------cccchhhcCCccc--ChhhhhhcCHHHHHhh-CCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCc---e
Confidence 10 00111 1255542 3456778899998887 8999999999999999999999999999998754 2
Q ss_pred cEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 694 PILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 694 ~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
.+.+++++||++..... .+....+.+||.++|+
T Consensus 708 ~~~~~~~~~H~~~~~~~-~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 708 ELMTYPGAKHGLSGADA-LHRYRVAEAFLGRCLK 740 (741)
T ss_dssp EEEEETTCCSSCCHHHH-HHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCCCCCch-hHHHHHHHHHHHHhcC
Confidence 33338999999765322 4456667899999885
No 11
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=2.1e-43 Score=405.18 Aligned_cols=499 Identities=14% Similarity=0.102 Sum_probs=363.0
Q ss_pred EeeceeeCCCCCEEEEEEEc-CCCcEEEEEEEEC--CCCceeccCccceeeeEEEecCCCEEEEEEecCCCCcceeEEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYD-KDNDYFTLSVRNL--NSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 201 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~-~g~e~~~l~v~dl--~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~ 201 (728)
.+..+.|||| +++|+.+. .|.+...||++++ .++.. .++.........|+|||+.++|+..... .+.+++
T Consensus 66 ~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~----~~~l~d 138 (582)
T 3o4h_A 66 SVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATED----RVALYA 138 (582)
T ss_dssp EECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSS----CEEEEE
T ss_pred ccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCC----CceEEE
Confidence 4667889999 68888775 5666788999999 65554 4443334446799999999998865432 233558
Q ss_pred CCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCC-ceEEEEEeCCCCCCCeEEeeecCCc-eEEEEeecCCEEEE
Q 004839 202 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT-SSKVFLINAADPFSGLTLIWECEGL-AHCIVEHHEGFLYL 279 (728)
Q Consensus 202 l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~l~~~dl~~~~~~~~~l~~~~~~-~~~~~~~dg~~l~~ 279 (728)
+.+++... +..... .++.+||||++|++.+.... ...||++|+++ ++.+.+...... ....++|||+.|+
T Consensus 139 ~~~g~~~~-l~~~~~----~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~--g~~~~l~~~~~~~~~~~~SpDG~~l~- 210 (582)
T 3o4h_A 139 LDGGGLRE-LARLPG----FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS--GGLRVFDSGEGSFSSASISPGMKVTA- 210 (582)
T ss_dssp EETTEEEE-EEEESS----CEEEEEEETTEEEEEEEEETTEEEEEEEETTT--CCCEEECCSSCEEEEEEECTTSCEEE-
T ss_pred ccCCcEEE-eecCCC----ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC--CCceEeecCCCccccceECCCCCEEE-
Confidence 87764333 333222 35789999999998776543 36799999987 456666654433 3456789999888
Q ss_pred EEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEE--------eeC-CEEEEEEecCCeeEEEEEecCC
Q 004839 280 FTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVD--------FCK-THMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 280 ~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~--------~~~-~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
.++.++ ...|+.++++ . +..+ ++.. .+..+..+. +.. +.+++....+|..+|+.+
T Consensus 211 ~~~~~~------~~~i~~~d~~-~---~~~~-~~~~-~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~---- 274 (582)
T 3o4h_A 211 GLETAR------EARLVTVDPR-D---GSVE-DLEL-PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID---- 274 (582)
T ss_dssp EEECSS------CEEEEEECTT-T---CCEE-ECCC-SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET----
T ss_pred EccCCC------eeEEEEEcCC-C---CcEE-EccC-CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE----
Confidence 444432 3578888876 2 3333 3332 222222222 443 378888888887666655
Q ss_pred CCCCcceeecccccccccCCC-ceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEeeccccccccccc
Q 004839 351 PAGKGVVHLKELHPHFLPLPK-YVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQQNMLRERTRILY 429 (728)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~p~-~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 429 (728)
++ . +..+. .+.++ +++ .+.++++.++..+|+++|.+|..+ +.+.| .+...
T Consensus 275 g~------~-------~~~~~~~v~~~----~~s--dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l---~~~~~------ 325 (582)
T 3o4h_A 275 GE------R-------VEAPQGNHGRV----VLW--RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG---GLPED------ 325 (582)
T ss_dssp TE------E-------ECCCSSEEEEE----EEE--TTEEEEEEEETTEEEEEEEETTCC-EEECC---CCCHH------
T ss_pred CC------e-------eccCCCceEEE----Eec--CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE---ecCCc------
Confidence 21 1 11222 22222 234 456778999999999999999765 44333 11000
Q ss_pred cCccccccccccccCccccccccCCCCccCCCCCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC
Q 004839 430 GTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL 509 (728)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~ 509 (728)
++ ......+.+.+++.||.+|+++++.|++.. .+.|+||++||+++..
T Consensus 326 -----------------------~~-------~~~~~~~~~~~~~~~g~~i~~~~~~p~~~~--~~~p~vv~~HG~~~~~ 373 (582)
T 3o4h_A 326 -----------------------LR-------RSIAGSRLVWVESFDGSRVPTYVLESGRAP--TPGPTVVLVHGGPFAE 373 (582)
T ss_dssp -----------------------HH-------HTEEEEEEEEEECTTSCEEEEEEEEETTSC--SSEEEEEEECSSSSCC
T ss_pred -----------------------cc-------cccCcceEEEEECCCCCEEEEEEEcCCCCC--CCCcEEEEECCCcccc
Confidence 00 245678899999999999999999998754 3789999999988776
Q ss_pred cCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHH
Q 004839 510 LDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLV 589 (728)
Q Consensus 510 ~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~ 589 (728)
....|....+.|+++||+|+.+|+||++++|..|.......++...++|+.+++++|++++.+| ||+++|+|+||+++
T Consensus 374 ~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a 451 (582)
T 3o4h_A 374 DSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMT 451 (582)
T ss_dssp CCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHH
T ss_pred cccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHH
Confidence 5677888899999999999999999999999999988888888888999999999999998887 99999999999999
Q ss_pred HHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccc-cccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCC
Q 004839 590 AAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADY-EEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFN 668 (728)
Q Consensus 590 ~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~-~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D 668 (728)
+.++.++|++|+++|+.+|+.++..+........ ..+. ..+| +..+.+..++|+.++.+ ++.|+|++||+.|
T Consensus 452 ~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~sp~~~~~~-i~~P~lii~G~~D 524 (582)
T 3o4h_A 452 LCALTMKPGLFKAGVAGASVVDWEEMYELSDAAF-RNFIEQLTG-----GSREIMRSRSPINHVDR-IKEPLALIHPQNA 524 (582)
T ss_dssp HHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHH-HHHHHHHTT-----TCHHHHHHTCGGGGGGG-CCSCEEEEEETTC
T ss_pred HHHHhcCCCceEEEEEcCCccCHHHHhhcccchh-HHHHHHHcC-----cCHHHHHhcCHHHHHhc-CCCCEEEEecCCC
Confidence 9999999999999999999999876543221111 0011 1123 24567888999999987 8999999999999
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 669 TRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 669 ~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
.+||+.++++++++|+.++++ ..+.+++++||++.......+......+||.++|+
T Consensus 525 ~~v~~~~~~~~~~~l~~~g~~---~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 525 SRTPLKPLLRLMGELLARGKT---FEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp SSSCHHHHHHHHHHHHHTTCC---EEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHhCCCC---EEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999998854 23333899999987555566667778999999884
No 12
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.8e-43 Score=411.82 Aligned_cols=523 Identities=13% Similarity=0.089 Sum_probs=360.9
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccc--------------------eeeeEEEecCCCEEEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAV--------------------RVSNIAWAKDGQALIY 185 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~--------------------~~~~~~WspDg~~l~y 185 (728)
+..++|||||++|||+.+ + +|+++|+++|+..+++..+ ....+.|||||+.|+|
T Consensus 112 ~~~~~~SPDG~~la~~~~--~----~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~ 185 (719)
T 1z68_A 112 IQYLCWSPVGSKLAYVYQ--N----NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAY 185 (719)
T ss_dssp BCCEEECSSTTCEEEEET--T----EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred cccceECCCCCEEEEEEC--C----eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEE
Confidence 567899999999999852 2 5999999999877665321 1147999999999999
Q ss_pred EEecCCC-----------------------------CcceeEEEECCCCCce--eEEee----ecCcceEEEEEEcCCCC
Q 004839 186 VVTDQNK-----------------------------RPYQIYCSIIGSTDED--ALLLE----ESNENVYVNIRHTKDFH 230 (728)
Q Consensus 186 ~~~~~~~-----------------------------~~~~v~~~~l~t~~~~--~lv~~----~~~~~~~~~~~~SpDg~ 230 (728)
.+.+... ....|+++++.+++.. ..+.. .....+...+.|||||+
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 8765321 1236788888765321 11110 01223446789999987
Q ss_pred EEEEEEcC-CCceEEEEEe----CCCCCCCeEEee----ecCC-ce------EEEEeecCCEEEEEEcCCccCCCCCceE
Q 004839 231 FVCVHTFS-TTSSKVFLIN----AADPFSGLTLIW----ECEG-LA------HCIVEHHEGFLYLFTDAAKEGQEADNHY 294 (728)
Q Consensus 231 ~l~~~~~~-~~~~~l~~~d----l~~~~~~~~~l~----~~~~-~~------~~~~~~dg~~l~~~tn~~~~~~~~~~~~ 294 (728)
.++...++ ....+|+++| +.+ ++.+.+. .... .+ ...+++||+.+++.+....+ ...
T Consensus 266 ~~~~~~~~~~~~~~l~~~d~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g-----~~~ 338 (719)
T 1z68_A 266 VCLQWLKRVQNVSVLSICDFREDWQT--WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG-----YKH 338 (719)
T ss_dssp EEEEEEESSTTEEEEEEEEECSSSSS--EECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS-----CEE
T ss_pred EEEEEeccccCeEEEEEEcccCCCCC--CceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC-----ceE
Confidence 55554443 3347899999 766 3333333 1221 11 34578999988886543322 367
Q ss_pred EEEeeCCCCCCCCCCeEEeecCCCceEEEE-EeeCCEEEEEEec----CCeeEEEEEecCCCCCCcceeecccccccccC
Q 004839 295 LLRCPVDASFPSRTWESVFIDDQGLVVEDV-DFCKTHMALILRE----GRTYRLCSVSLPLPAGKGVVHLKELHPHFLPL 369 (728)
Q Consensus 295 l~~~~~~~~~~~~~~~~li~~~~~~~i~~~-~~~~~~lv~~~~~----~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 369 (728)
|+.++++ . +..+.+.... ..+..+ .+.++.|++.... .+..+|+.++++++..+ ...+ ...+
T Consensus 339 l~~~~~~-~---~~~~~lt~~~--~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~-~~~l------~~~~ 405 (719)
T 1z68_A 339 IHYIKDT-V---ENAIQITSGK--WEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPS-KKCV------TCHL 405 (719)
T ss_dssp EEEESSC-S---TTCEECSCSS--SCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCC-EEES------STTT
T ss_pred EEEEECC-C---CceEecccCc--eEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCC-ceec------cCcc
Confidence 8888876 2 3344443322 223322 2255678877766 56778998887543100 0011 1112
Q ss_pred C---CceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEeeccccccccccccCccccccccccccCcc
Q 004839 370 P---KYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQQNMLRERTRILYGTASSATISLNAKSGES 446 (728)
Q Consensus 370 p---~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (728)
+ ....++ .++.+++.+++.++++..| .++.+|+++++...+...+....
T Consensus 406 ~~~~~~~~~~----~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~----------------------- 457 (719)
T 1z68_A 406 RKERCQYYTA----SFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKELE----------------------- 457 (719)
T ss_dssp TTTTBCBEEE----EECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHHH-----------------------
T ss_pred CCCCCceEEE----EECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecchhhh-----------------------
Confidence 1 112222 2456788899999999988 68889998887554443321000
Q ss_pred ccccccCCCCccCCCCCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCc-CcccH-HHHHHH-HH
Q 004839 447 VNELKSDSDNLWNDLSEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELL-DKRWR-SELKSL-LD 523 (728)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~-~~~~~-~~~~~l-~~ 523 (728)
..++.......+.+++++.| .+|+++++.|++..++++.|+||++||+++... ...|. .....| ++
T Consensus 458 ----------~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~ 526 (719)
T 1z68_A 458 ----------NALKNIQLPKEEIKKLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASK 526 (719)
T ss_dssp ----------HHTTSBCCCEEEEEEEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHT
T ss_pred ----------hhhccccCCceEEEEEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhc
Confidence 00011334578899999988 899999999998766778999999999987643 23343 233444 47
Q ss_pred CCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEE
Q 004839 524 RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAV 603 (728)
Q Consensus 524 ~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~ 603 (728)
+||+|+.+|+||+|++|..|.......++...++|+.+++++|++++.+|++||+|+|+||||++++.++.++|++|+++
T Consensus 527 ~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 606 (719)
T 1z68_A 527 EGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCG 606 (719)
T ss_dssp TCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEE
T ss_pred CCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEE
Confidence 99999999999999999998887777777778999999999999988899999999999999999999999999999999
Q ss_pred EEeCCcccchhhccCCCCCCCccccc--ccCCCCCHHHHHHHHccCcccccccCCCC-CeEEEEcCCCCCCCHHHHHHHH
Q 004839 604 VLEVPFLDATNTLLYPILPLIAADYE--EFGYPGDIDDFHAIRNYSPYDNIQKDVLY-PAVLVTSSFNTRFGVWEAAKWV 680 (728)
Q Consensus 604 v~~~p~~d~~~~~~~~~~~~~~~~~~--~~g~p~~~~~~~~~~~~sP~~~i~~~~~~-P~lli~g~~D~~Vp~~~~~~~~ 680 (728)
|+.+|+.++..+. ..+. .+|.|...+..+.+...+|+.++.+ ++. |+|++||+.|.+||+.++.+++
T Consensus 607 v~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~P~li~~G~~D~~v~~~~~~~~~ 676 (719)
T 1z68_A 607 IAVAPVSSWEYYA---------SVYTERFMGLPTKDDNLEHYKNSTVMARAEY-FRNVDYLLIHGTADDNVHFQNSAQIA 676 (719)
T ss_dssp EEESCCCCTTTSB---------HHHHHHHHCCSSTTTTHHHHHHTCSGGGGGG-GTTSEEEEEEETTCSSSCTHHHHHHH
T ss_pred EEcCCccChHHhc---------cccchhhcCCcccccchhhhhhCCHhHHHhc-CCCCcEEEEEeCCCCCcCHHHHHHHH
Confidence 9999998875321 1111 1365633334566788899988887 788 8999999999999999999999
Q ss_pred HHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 681 ARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 681 ~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
++|++++++ ..+.+++++||++ ...........+.+||.++|+
T Consensus 677 ~~l~~~~~~---~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 677 KALVNAQVD---FQAMWYSDQNHGL-SGLSTNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp HHHHHTTCC---CEEEEETTCCTTC-CTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCc---eEEEEECcCCCCC-CcccHHHHHHHHHHHHHHhhC
Confidence 999998754 2333389999998 433344456678899999885
No 13
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=7.8e-43 Score=410.75 Aligned_cols=523 Identities=13% Similarity=0.113 Sum_probs=358.1
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCcc--ce------------------eeeEEEecCCCEEEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA--VR------------------VSNIAWAKDGQALIY 185 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~--~~------------------~~~~~WspDg~~l~y 185 (728)
+..++|||||++|||..+ + +|+++|+++|+..+++.. .. ...+.|||||+.|+|
T Consensus 116 ~~~~~~SPdG~~la~~~~--~----~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~ 189 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFE--N----NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAY 189 (723)
T ss_dssp CSBCCBCSSTTCEEEEET--T----EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEE
T ss_pred ccccEECCCCCEEEEEEC--C----eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEE
Confidence 567889999999999864 2 599999999987665432 11 257999999999999
Q ss_pred EEecCCC-----------------------------CcceeEEEECCCCCceeEEeeec-----CcceEEEEEEcCCCCE
Q 004839 186 VVTDQNK-----------------------------RPYQIYCSIIGSTDEDALLLEES-----NENVYVNIRHTKDFHF 231 (728)
Q Consensus 186 ~~~~~~~-----------------------------~~~~v~~~~l~t~~~~~lv~~~~-----~~~~~~~~~~SpDg~~ 231 (728)
.+.+... ....|+++|+.+++....+ ... .......+.|||||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l-~~~~~~~~~~~~~~~~~~SpDg~~ 268 (723)
T 1xfd_A 190 AAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEM-MPPDDPRMREYYITMVKWATSTKV 268 (723)
T ss_dssp EEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEEC-CCCCCGGGSSEEEEEEEESSSSEE
T ss_pred EEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEe-eCCccCCCccceeEEEEEeCCCeE
Confidence 8765321 1237888998776521222 211 1233457899999998
Q ss_pred EEEEEcCC-CceEEEEEeCCCCCCCeEEeeec-C-Cc-----eEEEEeecCCEEEEE-EcCCccCCCCCceEEEEee-CC
Q 004839 232 VCVHTFST-TSSKVFLINAADPFSGLTLIWEC-E-GL-----AHCIVEHHEGFLYLF-TDAAKEGQEADNHYLLRCP-VD 301 (728)
Q Consensus 232 l~~~~~~~-~~~~l~~~dl~~~~~~~~~l~~~-~-~~-----~~~~~~~dg~~l~~~-tn~~~~~~~~~~~~l~~~~-~~ 301 (728)
|++.+++. ....|+++|+++ ++...+... . .. ....+++||+.|++. ++.++.. ....+|+.++ ..
T Consensus 269 l~~~~~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~--~~~~~l~~~d~~~ 344 (723)
T 1xfd_A 269 AVTWLNRAQNVSILTLCDATT--GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR--GKFYHITVSSSQP 344 (723)
T ss_dssp EEEEEETTSCEEEEEEEETTT--CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSS--SCEEEEEEECSSC
T ss_pred EEEEEcCCCCeEEEEEEeCCC--CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCC--cceeEEEEEeccC
Confidence 87766553 447899999987 444444322 1 11 134678999999887 4444311 1135788887 33
Q ss_pred CCCCCCC---CeEEeecCCCce-EEEEEeeCCEEEEEEecC--CeeEEEEEecCCCCCCcceeecccccccccC----CC
Q 004839 302 ASFPSRT---WESVFIDDQGLV-VEDVDFCKTHMALILREG--RTYRLCSVSLPLPAGKGVVHLKELHPHFLPL----PK 371 (728)
Q Consensus 302 ~~~~~~~---~~~li~~~~~~~-i~~~~~~~~~lv~~~~~~--g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~----p~ 371 (728)
. +. .+.+.....+.. +-.+...++.|++....+ +..+|+.+++.++. . ...+.- ..
T Consensus 345 -~---~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~-~---------~~~l~~~~~~~~ 410 (723)
T 1xfd_A 345 -N---SSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNF-N---------RQCLSCDLVENC 410 (723)
T ss_dssp -C---SSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTC-C---------CBCSSTTSSSSC
T ss_pred -C---CCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCC-C---------cceecccccCCC
Confidence 1 22 333332222211 113444467888877766 66778888764321 0 011111 11
Q ss_pred ceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEE-EEEeeccccccccccccCccccccccccccCcccccc
Q 004839 372 YVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWN-IIQQQNMLRERTRILYGTASSATISLNAKSGESVNEL 450 (728)
Q Consensus 372 ~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (728)
.+.. ..++++++.+++.++++..|..++. +..+++.. .+.......
T Consensus 411 ~~~~----~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~---------------------------- 457 (723)
T 1xfd_A 411 TYFS----ASFSHSMDFFLLKCEGPGVPMVTVH-NTTDKKKMFDLETNEHVK---------------------------- 457 (723)
T ss_dssp CCCE----EEECTTSSEEEEECCSSSSCCEEEE-ETTTCCEEEEEECCHHHH----------------------------
T ss_pred CeEE----EEECCCCCEEEEEccCCCCCeEEEE-ECCCCCEEEEeccChhhh----------------------------
Confidence 1222 2356789999999999999987664 76555432 232211000
Q ss_pred ccCCCCccCCCCCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCc-Cccc--HHHHHHHHHCCeE
Q 004839 451 KSDSDNLWNDLSEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELL-DKRW--RSELKSLLDRGWV 527 (728)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~-~~~~--~~~~~~l~~~Gy~ 527 (728)
.++........+.+.+++.|| +++++++.|++...+++.|+||++||+++... ...| ....+.|+++||+
T Consensus 458 ------~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~ 530 (723)
T 1xfd_A 458 ------KAINDRQMPKVEYRDIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAV 530 (723)
T ss_dssp ------HHHHTSCCCBCCBCCEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCE
T ss_pred ------hhhhhccCCCceEEEEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEE
Confidence 001112344567788899999 99999999998766778999999999887532 2333 3455677789999
Q ss_pred EEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC----CCceeEE
Q 004839 528 VAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC----PDLFRAV 603 (728)
Q Consensus 528 v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~----p~~f~a~ 603 (728)
|+.+|+||+|++|..|.......++...++|+.+++++|.+++.+|++||+|+|+||||++++.++.++ |++|+++
T Consensus 531 vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~ 610 (723)
T 1xfd_A 531 VVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCG 610 (723)
T ss_dssp EECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEE
T ss_pred EEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEE
Confidence 999999999999988877666666667899999999999998889999999999999999999999999 9999999
Q ss_pred EEeCCcccchhhccCCCCCCCccccc--ccCCCCCHHHHHHHHccCcccccccCCC-CCeEEEEcCCCCCCCHHHHHHHH
Q 004839 604 VLEVPFLDATNTLLYPILPLIAADYE--EFGYPGDIDDFHAIRNYSPYDNIQKDVL-YPAVLVTSSFNTRFGVWEAAKWV 680 (728)
Q Consensus 604 v~~~p~~d~~~~~~~~~~~~~~~~~~--~~g~p~~~~~~~~~~~~sP~~~i~~~~~-~P~lli~g~~D~~Vp~~~~~~~~ 680 (728)
|+.+|+.++..+. ..+. .++.|... .+.+...+|+.++.+ ++ .|+|++||+.|.+||+.++++++
T Consensus 611 v~~~~~~~~~~~~---------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~P~lii~G~~D~~v~~~~~~~~~ 678 (723)
T 1xfd_A 611 SALSPITDFKLYA---------SAFSERYLGLHGLD--NRAYEMTKVAHRVSA-LEEQQFLIIHPTADEKIHFQHTAELI 678 (723)
T ss_dssp EEESCCCCTTSSB---------HHHHHHHHCCCSSC--CSSTTTTCTHHHHTS-CCSCEEEEEEETTCSSSCHHHHHHHH
T ss_pred EEccCCcchHHhh---------hhccHhhcCCccCC--hhHHHhcChhhHHhh-cCCCCEEEEEeCCCCCcCHhHHHHHH
Confidence 9999998865320 0111 12444321 123455677777776 78 69999999999999999999999
Q ss_pred HHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhcC
Q 004839 681 ARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMMES 728 (728)
Q Consensus 681 ~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~~ 728 (728)
++|++++++ ..+.+++++||+.............+.+||.++|++
T Consensus 679 ~~l~~~~~~---~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 723 (723)
T 1xfd_A 679 TQLIRGKAN---YSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFRI 723 (723)
T ss_dssp HHHHHTTCC---CEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHCCCC---eEEEEECCCCcccccCcchHHHHHHHHHHHHHHhcC
Confidence 999998754 233338999999754444455567789999999875
No 14
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.92 E-value=2.4e-24 Score=233.67 Aligned_cols=239 Identities=14% Similarity=0.080 Sum_probs=179.6
Q ss_pred ceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccc
Q 004839 465 YSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWH 544 (728)
Q Consensus 465 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~ 544 (728)
..++++.+++ ||.+|+++++.|++. ++.|+||++||+.+.. .. +....+.|+++||+|+++|+||+|++.
T Consensus 125 ~~~~~v~~~~-dg~~i~~~l~~p~~~---~~~P~vl~~hG~~~~~-~~-~~~~~~~l~~~G~~v~~~d~rG~G~s~---- 194 (386)
T 2jbw_A 125 PPAERHELVV-DGIPMPVYVRIPEGP---GPHPAVIMLGGLESTK-EE-SFQMENLVLDRGMATATFDGPGQGEMF---- 194 (386)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSSS---CCEEEEEEECCSSCCT-TT-THHHHHHHHHTTCEEEEECCTTSGGGT----
T ss_pred CCeEEEEEEe-CCEEEEEEEEcCCCC---CCCCEEEEeCCCCccH-HH-HHHHHHHHHhCCCEEEEECCCCCCCCC----
Confidence 5788899988 899999999988763 5789999988865433 22 333488899999999999999998751
Q ss_pred cccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCC
Q 004839 545 HDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLI 624 (728)
Q Consensus 545 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~ 624 (728)
..........+|+.+++++|.+++.+|+++|+|+|+|+||+++++++.+ |++|+++|+. |+.++......-...+.
T Consensus 195 --~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~~~~~~~ 270 (386)
T 2jbw_A 195 --EYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDLETPLTK 270 (386)
T ss_dssp --TTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGGSCHHHH
T ss_pred --CCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHhccHHHH
Confidence 1122233445678899999999999999999999999999999999998 9999999999 99987654321000000
Q ss_pred cccccccCCCCCHHHH-HHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHH-HhCCCCCCCccEEEEcCCC
Q 004839 625 AADYEEFGYPGDIDDF-HAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARV-RESTIYDPKRPILLNLTTD 702 (728)
Q Consensus 625 ~~~~~~~g~p~~~~~~-~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L-~~~~~~~~~~~~~~~~~~g 702 (728)
......+|.+...+.. +.+..++|..++.+ +++|+|+++|..|. ||+.++.+++++| +. + ..+.+++++|
T Consensus 271 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~-~-----~~~~~~~~~g 342 (386)
T 2jbw_A 271 ESWKYVSKVDTLEEARLHVHAALETRDVLSQ-IACPTYILHGVHDE-VPLSFVDTVLELVPAE-H-----LNLVVEKDGD 342 (386)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHTCCTTTGGG-CCSCEEEEEETTSS-SCTHHHHHHHHHSCGG-G-----EEEEEETTCC
T ss_pred HHHHHHhCCCCHHHHHHHHHHhCChhhhhcc-cCCCEEEEECCCCC-CCHHHHHHHHHHhcCC-C-----cEEEEeCCCC
Confidence 0111224544333445 67788999988887 89999999999999 9999999999999 64 2 2344489999
Q ss_pred CCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 703 IVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 703 H~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
|+... +.......+.+||.++|+
T Consensus 343 H~~~~--~~~~~~~~i~~fl~~~l~ 365 (386)
T 2jbw_A 343 HCCHN--LGIRPRLEMADWLYDVLV 365 (386)
T ss_dssp GGGGG--GTTHHHHHHHHHHHHHHT
T ss_pred cCCcc--chHHHHHHHHHHHHHhcC
Confidence 97533 233445667899999985
No 15
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.91 E-value=7.6e-24 Score=216.43 Aligned_cols=217 Identities=13% Similarity=0.085 Sum_probs=142.8
Q ss_pred ceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccc
Q 004839 465 YSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWH 544 (728)
Q Consensus 465 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~ 544 (728)
...|+......||.+|+++|+.|++. ++.|+||++||+.+......+....+.|+++||+|+.+|+||+|+++....
T Consensus 28 ~~~e~~~~~~~dG~~i~g~l~~P~~~---~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~ 104 (259)
T 4ao6_A 28 SVQERGFSLEVDGRTVPGVYWSPAEG---SSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQA 104 (259)
T ss_dssp TEEEEEEEEEETTEEEEEEEEEESSS---CCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC---------
T ss_pred CceEEEEEEeeCCeEEEEEEEeCCCC---CCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCccc
Confidence 34455444567999999999999763 467999999998776655667778899999999999999999997655443
Q ss_pred cccccCCC---------------CCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCc
Q 004839 545 HDGRRTKK---------------LNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 609 (728)
Q Consensus 545 ~~~~~~~~---------------~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~ 609 (728)
........ ...+.|..+++++|.. .+|++||+++|+|+||++++.++...|+ ++|+|+..+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~--~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~ 181 (259)
T 4ao6_A 105 GREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEA--EEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMG 181 (259)
T ss_dssp ----CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHH--HHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCC
T ss_pred ccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhh--ccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccc
Confidence 22111110 1124567777887764 4689999999999999999999998775 5666654442
Q ss_pred ccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCC
Q 004839 610 LDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIY 689 (728)
Q Consensus 610 ~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~ 689 (728)
.+.. + ..++...+.+ +++|+|++||+.|.+||+.++.+++++|....
T Consensus 182 ~~~~--------------------~----------~~~~~~~a~~-i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~-- 228 (259)
T 4ao6_A 182 VEGV--------------------N----------GEDLVRLAPQ-VTCPVRYLLQWDDELVSLQSGLELFGKLGTKQ-- 228 (259)
T ss_dssp TTST--------------------T----------HHHHHHHGGG-CCSCEEEEEETTCSSSCHHHHHHHHHHCCCSS--
T ss_pred cccc--------------------c----------ccchhhhhcc-CCCCEEEEecCCCCCCCHHHHHHHHHHhCCCC--
Confidence 2110 0 0123344555 89999999999999999999999999996543
Q ss_pred CCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 690 DPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 690 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
+.+.++++ +|...... +..+..++||.++|.
T Consensus 229 ---k~l~~~~G-~H~~~p~~---e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 229 ---KTLHVNPG-KHSAVPTW---EMFAGTVDYLDQRLK 259 (259)
T ss_dssp ---EEEEEESS-CTTCCCHH---HHTHHHHHHHHHHCC
T ss_pred ---eEEEEeCC-CCCCcCHH---HHHHHHHHHHHHhcC
Confidence 33443554 67543332 234557899999984
No 16
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.91 E-value=2.4e-23 Score=221.14 Aligned_cols=247 Identities=14% Similarity=0.118 Sum_probs=179.4
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCC
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGK 541 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~ 541 (728)
...+.++.+++++.||.+|+++++.|++. +++.|+||++||+.+.. .+......|+++||+|+.+|+||+|+++.
T Consensus 63 ~~~~~~~~~~~~~~dg~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~---~~~~~~~~l~~~G~~v~~~d~rG~g~s~~ 137 (337)
T 1vlq_A 63 LKTVEAYDVTFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGR---GFPHDWLFWPSMGYICFVMDTRGQGSGWL 137 (337)
T ss_dssp CSSEEEEEEEEECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCC---CCGGGGCHHHHTTCEEEEECCTTCCCSSS
T ss_pred CCCeEEEEEEEEcCCCCEEEEEEEecCCC--CCCccEEEEEcCCCCCC---CCchhhcchhhCCCEEEEecCCCCCCccc
Confidence 45678999999999999999999999863 45689999999975543 23334567889999999999999996643
Q ss_pred cccccc-----------------ccCCC----CCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCce
Q 004839 542 KWHHDG-----------------RRTKK----LNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLF 600 (728)
Q Consensus 542 ~~~~~~-----------------~~~~~----~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f 600 (728)
...... ..... ...++|+.+++++|.+++.+|++||+++|+|+||++++.++.++| ++
T Consensus 138 ~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v 216 (337)
T 1vlq_A 138 KGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KA 216 (337)
T ss_dssp CCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SC
T ss_pred CCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-Cc
Confidence 210000 00000 135889999999999998899999999999999999999999988 58
Q ss_pred eEEEEeCCcccchhhcc--CCCCCCCccccccc--CCCCC-HHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHH
Q 004839 601 RAVVLEVPFLDATNTLL--YPILPLIAADYEEF--GYPGD-IDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWE 675 (728)
Q Consensus 601 ~a~v~~~p~~d~~~~~~--~~~~~~~~~~~~~~--g~p~~-~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~ 675 (728)
+++|+.+|+++....+. ....+. ....++ ..+.. ...+..+..++|...+.+ ++.|+|+++|..|..||+.+
T Consensus 217 ~~~vl~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~lii~G~~D~~~p~~~ 293 (337)
T 1vlq_A 217 KALLCDVPFLCHFRRAVQLVDTHPY--AEITNFLKTHRDKEEIVFRTLSYFDGVNFAAR-AKIPALFSVGLMDNICPPST 293 (337)
T ss_dssp CEEEEESCCSCCHHHHHHHCCCTTH--HHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTT-CCSCEEEEEETTCSSSCHHH
T ss_pred cEEEECCCcccCHHHHHhcCCCcch--HHHHHHHHhCchhHHHHHHhhhhccHHHHHHH-cCCCEEEEeeCCCCCCCchh
Confidence 99999999765433221 111111 011111 22322 233455667788888876 89999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 676 AAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 676 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
+.+++++|+.. ..+.+++++||++... +.....++||.++|+
T Consensus 294 ~~~~~~~l~~~------~~~~~~~~~gH~~~~~----~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 294 VFAAYNYYAGP------KEIRIYPYNNHEGGGS----FQAVEQVKFLKKLFE 335 (337)
T ss_dssp HHHHHHHCCSS------EEEEEETTCCTTTTHH----HHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCC------cEEEEcCCCCCCCcch----hhHHHHHHHHHHHHh
Confidence 99999999752 2333489999986332 234567899998874
No 17
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.89 E-value=9.4e-22 Score=197.53 Aligned_cols=225 Identities=13% Similarity=0.097 Sum_probs=165.8
Q ss_pred CceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCcc
Q 004839 464 FYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKW 543 (728)
Q Consensus 464 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~ 543 (728)
.+..+.+.+++ +|..++++++.|++. .++.|+||++||..+.. ..+....+.|+++||.|+++|+||+|+....+
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~--~~~~p~vv~~HG~~g~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~ 77 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNA--DGPLPIVIVVQEIFGVH--EHIRDLCRRLAQEGYLAIAPELYFRQGDPNEY 77 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTC--CSCEEEEEEECCTTCSC--HHHHHHHHHHHHTTCEEEEECTTTTTCCGGGC
T ss_pred cceeeeEEEec-CCcceEEEEecCCCC--CCCCCEEEEEcCcCccC--HHHHHHHHHHHHCCcEEEEecccccCCCCCch
Confidence 35678888888 899999999999863 35689999999966543 55677788999999999999999988754443
Q ss_pred cccccc-------CCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc
Q 004839 544 HHDGRR-------TKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL 616 (728)
Q Consensus 544 ~~~~~~-------~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~ 616 (728)
...... .......+|+.+++++|.+++ +|+++|+++|+|+||.+++.++.++|+ ++++|+..|.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~--- 152 (241)
T 3f67_A 78 HDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGE--- 152 (241)
T ss_dssp CSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCC---
T ss_pred hhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCC---
Confidence 321110 011235789999999999887 889999999999999999999999887 66777765532110
Q ss_pred cCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEE
Q 004839 617 LYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPIL 696 (728)
Q Consensus 617 ~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~ 696 (728)
+. .+...+|...+.+ ++.|+|+++|+.|..||+.++.+++++|++.+.+ ..+.
T Consensus 153 -----------------~~------~~~~~~~~~~~~~-~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~---~~~~ 205 (241)
T 3f67_A 153 -----------------KS------LNSPKHPVDIAVD-LNAPVLGLYGAKDASIPQDTVETMRQALRAANAT---AEIV 205 (241)
T ss_dssp -----------------CC------SSSCCCHHHHGGG-CCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCS---EEEE
T ss_pred -----------------Cc------cCCccCHHHhhhh-cCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCC---cEEE
Confidence 00 0112345555665 7899999999999999999999999999987743 2333
Q ss_pred EEcCCCCCCCc-------hhhhHHHHHHHHHHHHHh
Q 004839 697 LNLTTDIVEEN-------RYLQCKESALETAFLIKM 725 (728)
Q Consensus 697 ~~~~~gH~~~~-------~~~~~~~~~~~~afl~~~ 725 (728)
.++++||++.. .....+......+||.++
T Consensus 206 ~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 206 VYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp EETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred EECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 38899998742 223344556678888754
No 18
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.88 E-value=5.4e-22 Score=227.28 Aligned_cols=255 Identities=13% Similarity=0.148 Sum_probs=178.8
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCc-----C-cccHH-HH---HHHHHCCeEEEEE
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELL-----D-KRWRS-EL---KSLLDRGWVVAFA 531 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~-----~-~~~~~-~~---~~l~~~Gy~v~~~ 531 (728)
...+..+.+.+++.||.+|.++++.|++. ++.|+||++||. +... . ..|.. .. +.|+++||+|+.+
T Consensus 20 ~~~~~~~~v~i~~~DG~~L~~~~~~P~~~---~~~P~vl~~hgy-g~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~ 95 (615)
T 1mpx_A 20 SNDYIKREVMIPMRDGVKLHTVIVLPKGA---KNAPIVLTRTPY-DASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQ 95 (615)
T ss_dssp TCSEEEEEEEEECTTSCEEEEEEEEETTC---CSEEEEEEEESS-CHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEE
T ss_pred cCCCEEEEEEEECCCCCEEEEEEEeCCCC---CCeeEEEEEcCC-CCccccccccccccccccchhHHHHHhCCeEEEEE
Confidence 45678889999999999999999999763 578999999963 3211 1 11221 12 8899999999999
Q ss_pred cCCCCCCCCCccccccc-----cCCCCCcHHHHHHHHHHHHHc-CCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEE
Q 004839 532 DVRGGGGGGKKWHHDGR-----RTKKLNSIKDFISCARFLIEK-EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVL 605 (728)
Q Consensus 532 d~RG~g~~G~~~~~~~~-----~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~ 605 (728)
|+||+|+++..+..... ..++....+|+.++++||.++ ++.| .||+++|+||||+++++++.++|++|+|+|+
T Consensus 96 D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~ 174 (615)
T 1mpx_A 96 DVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVP 174 (615)
T ss_dssp ECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEE
T ss_pred CCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEe
Confidence 99999999887754321 223337899999999999998 8877 5999999999999999999888999999999
Q ss_pred eCCcccchh--hccCCCC-CCC-cccc---------------------c------------------------cc-CCCC
Q 004839 606 EVPFLDATN--TLLYPIL-PLI-AADY---------------------E------------------------EF-GYPG 635 (728)
Q Consensus 606 ~~p~~d~~~--~~~~~~~-~~~-~~~~---------------------~------------------------~~-g~p~ 635 (728)
.+|+.|+.. .+..... .+. ..++ . ++ ..+.
T Consensus 175 ~~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 254 (615)
T 1mpx_A 175 ESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAA 254 (615)
T ss_dssp ESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCS
T ss_pred cCCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCC
Confidence 999999532 1100000 000 0000 0 00 0010
Q ss_pred CHHHHHHHHccCcccccccC--CCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc------
Q 004839 636 DIDDFHAIRNYSPYDNIQKD--VLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN------ 707 (728)
Q Consensus 636 ~~~~~~~~~~~sP~~~i~~~--~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~------ 707 (728)
..+++.+.||+.++. + |++|+|+|||..|.+ +..++.+++++|++++++.....+++.+. +|+...
T Consensus 255 ---~d~~w~~~Sp~~~~~-~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~~~~ 328 (615)
T 1mpx_A 255 ---YDAFWQEQALDKVMA-RTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSAL 328 (615)
T ss_dssp ---SCHHHHTTCHHHHHH-TSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEE
T ss_pred ---cChhhhhcChhhhhh-ccCCCCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCcccccccc
Confidence 014566789988776 5 899999999999987 88999999999999874310123333555 687511
Q ss_pred -------hhhhHHHHHHHHHHHHHhhc
Q 004839 708 -------RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 708 -------~~~~~~~~~~~~afl~~~l~ 727 (728)
..........+++||+++|.
T Consensus 329 ~~~~f~~~~~~~~~~~~~~~wfd~~Lk 355 (615)
T 1mpx_A 329 GALNFEGDTARQFRHDVLRPFFDQYLV 355 (615)
T ss_dssp TTEECSSCHHHHHHHHTHHHHHHHHHS
T ss_pred CccccCcccchhhhhhHHHHHHHHHhc
Confidence 01111124567899999984
No 19
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.88 E-value=8.6e-22 Score=202.63 Aligned_cols=233 Identities=12% Similarity=0.114 Sum_probs=167.2
Q ss_pred EEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCC-CCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccc
Q 004839 470 YDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAY-GELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGR 548 (728)
Q Consensus 470 ~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~-~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~ 548 (728)
..+.+.+|..+.+++..|.....+++.|+||++|||. .......+......|+++||.|+.+|+||+|.... +
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~-~----- 90 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTN-Y----- 90 (276)
T ss_dssp EECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCC-S-----
T ss_pred ccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCC-C-----
Confidence 4566779999887665444322346789999999964 22334556777889999999999999999986321 0
Q ss_pred cCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHh-CCCceeEEEEeCCcccchhhccCCCCCCC
Q 004839 549 RTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINC-CPDLFRAVVLEVPFLDATNTLLYPILPLI 624 (728)
Q Consensus 549 ~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~-~p~~f~a~v~~~p~~d~~~~~~~~~~~~~ 624 (728)
......+.|+.++++++.++. .+|+++|+++|+|+||++++.++.+ .+.+++++|+.+|+.++.... ...+
T Consensus 91 -~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~--~~~~-- 165 (276)
T 3hxk_A 91 -NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGW--PSDL-- 165 (276)
T ss_dssp -CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSC--SSSS--
T ss_pred -CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhC--Ccch--
Confidence 111246789999999998764 3789999999999999999999987 788999999999998865431 1111
Q ss_pred cccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCC
Q 004839 625 AADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIV 704 (728)
Q Consensus 625 ~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 704 (728)
.+..+- +.+ . ..++|...+.+ +..|+|++||+.|..||+.++.+++++|++.+.+ ..+.+++++||+
T Consensus 166 --~~~~~~-~~~---~---~~~~~~~~~~~-~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~---~~~~~~~~~~H~ 232 (276)
T 3hxk_A 166 --SHFNFE-IEN---I---SEYNISEKVTS-STPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVP---FEAHFFESGPHG 232 (276)
T ss_dssp --SSSCCC-CSC---C---GGGBTTTTCCT-TSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCC---EEEEEESCCCTT
T ss_pred --hhhhcC-chh---h---hhCChhhcccc-CCCCEEEEecCCCceeChHHHHHHHHHHHHcCCC---eEEEEECCCCCC
Confidence 011111 111 1 55678887876 8999999999999999999999999999988743 233338999998
Q ss_pred CCc-hh-----------hhHHHHHHHHHHHHHhh
Q 004839 705 EEN-RY-----------LQCKESALETAFLIKMM 726 (728)
Q Consensus 705 ~~~-~~-----------~~~~~~~~~~afl~~~l 726 (728)
+.. .. ..........+||.++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 233 VSLANRTTAPSDAYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp CTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHH
T ss_pred ccccCccccccccccCchHHHHHHHHHHHHHhCc
Confidence 654 22 23344555678998865
No 20
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.88 E-value=1.1e-21 Score=205.61 Aligned_cols=247 Identities=13% Similarity=0.109 Sum_probs=174.0
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCC-CcCcccHHHHHHHHHCCeEEEEEcCCCCCCCC
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGE-LLDKRWRSELKSLLDRGWVVAFADVRGGGGGG 540 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G 540 (728)
...+..+.+.+++.||..|+++++.|++ .++.|+||++||+.+. . ..+. ....|+++||+|+.+|+||+|++.
T Consensus 51 ~~~~~~~~~~~~~~~g~~i~~~~~~P~~---~~~~p~vv~~HG~~~~~~--~~~~-~~~~l~~~g~~v~~~d~rg~g~s~ 124 (318)
T 1l7a_A 51 ADGVKVYRLTYKSFGNARITGWYAVPDK---EGPHPAIVKYHGYNASYD--GEIH-EMVNWALHGYATFGMLVRGQQRSE 124 (318)
T ss_dssp CSSEEEEEEEEEEGGGEEEEEEEEEESS---CSCEEEEEEECCTTCCSG--GGHH-HHHHHHHTTCEEEEECCTTTSSSC
T ss_pred CCCeEEEEEEEEccCCCEEEEEEEeeCC---CCCccEEEEEcCCCCCCC--CCcc-cccchhhCCcEEEEecCCCCCCCC
Confidence 3567788999999999999999999976 3568999999998664 3 2233 334788999999999999999877
Q ss_pred CccccccccC-----CC---------CCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEe
Q 004839 541 KKWHHDGRRT-----KK---------LNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLE 606 (728)
Q Consensus 541 ~~~~~~~~~~-----~~---------~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~ 606 (728)
..+...+... .+ ...++|+.+++++|.++..+|+++|+++|+|+||.+++.++.++|+ ++++|+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~ 203 (318)
T 1l7a_A 125 DTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVAD 203 (318)
T ss_dssp CCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEE
T ss_pred CcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEec
Confidence 6543211111 11 1347899999999999988899999999999999999999998886 6777888
Q ss_pred CCcccchhhcc--CCCCCCCc-ccc-cccCCCC-CHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHH
Q 004839 607 VPFLDATNTLL--YPILPLIA-ADY-EEFGYPG-DIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVA 681 (728)
Q Consensus 607 ~p~~d~~~~~~--~~~~~~~~-~~~-~~~g~p~-~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~ 681 (728)
+|+++...... ....++.. ..+ ...+.+. .......+..++|...+.+ ++.|+|+++|+.|..||+.++.++++
T Consensus 204 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~li~~g~~D~~~~~~~~~~~~~ 282 (318)
T 1l7a_A 204 YPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADR-VKVPVLMSIGLIDKVTPPSTVFAAYN 282 (318)
T ss_dssp SCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGG-CCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred CCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhh-CCCCEEEEeccCCCCCCcccHHHHHh
Confidence 88754322111 11111110 001 0111111 1122334455667777776 89999999999999999999999999
Q ss_pred HHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 682 RVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 682 ~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
+++.. ..+.+++++||+.. .+......+||.++|+
T Consensus 283 ~l~~~------~~~~~~~~~~H~~~-----~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 283 HLETK------KELKVYRYFGHEYI-----PAFQTEKLAFFKQILK 317 (318)
T ss_dssp HCCSS------EEEEEETTCCSSCC-----HHHHHHHHHHHHHHHC
T ss_pred hcCCC------eeEEEccCCCCCCc-----chhHHHHHHHHHHHhC
Confidence 88652 13333899999832 1234557899998874
No 21
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.88 E-value=5.6e-21 Score=196.65 Aligned_cols=233 Identities=13% Similarity=0.077 Sum_probs=163.4
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCC---CCCCCccEEEEEcCCCC-CCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCC
Q 004839 466 SCEQYDVPSHDGISVPLTIIYSPKY---KKENQNPGLLHGHGAYG-ELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGK 541 (728)
Q Consensus 466 ~~~~~~~~s~dG~~i~~~l~~p~~~---~~~~~~P~vv~~hGg~~-~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~ 541 (728)
..+.+.+ ..+|..+++.++.|++. ...++.|+||++|||.. ......|......|+++||.|+.+|+||+|..+.
T Consensus 3 ~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~ 81 (277)
T 3bxp_A 3 QVEQRTL-NTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQS 81 (277)
T ss_dssp EEEEEEE-CSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCC
T ss_pred ceEEEEe-ccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCc
Confidence 3456666 45778899999999731 23467899999999532 2233456677889999999999999999874322
Q ss_pred ccccccccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhC--------------CCceeEEE
Q 004839 542 KWHHDGRRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCC--------------PDLFRAVV 604 (728)
Q Consensus 542 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--------------p~~f~a~v 604 (728)
.....++|+.++++++.++. .+|++||+++|+|+||++++.++.++ +.+++++|
T Consensus 82 ---------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v 152 (277)
T 3bxp_A 82 ---------VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAII 152 (277)
T ss_dssp ---------CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEE
T ss_pred ---------cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEE
Confidence 12246889999999998753 36788999999999999999999875 77899999
Q ss_pred EeCCcccchhhccCCCCCCCcccc-cccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHH
Q 004839 605 LEVPFLDATNTLLYPILPLIAADY-EEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARV 683 (728)
Q Consensus 605 ~~~p~~d~~~~~~~~~~~~~~~~~-~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L 683 (728)
+.+|+.++...+ ....... ..++ .+...+|...+.+ +..|+|++||+.|..||+.++.+++++|
T Consensus 153 ~~~p~~~~~~~~-----~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~P~lii~G~~D~~vp~~~~~~~~~~l 217 (277)
T 3bxp_A 153 LGYPVIDLTAGF-----PTTSAARNQITT---------DARLWAAQRLVTP-ASKPAFVWQTATDESVPPINSLKYVQAM 217 (277)
T ss_dssp EESCCCBTTSSS-----SSSHHHHHHHCS---------CGGGSBGGGGCCT-TSCCEEEEECTTCCCSCTHHHHHHHHHH
T ss_pred EeCCcccCCCCC-----CCccccchhccc---------hhhhcCHhhcccc-CCCCEEEEeeCCCCccChHHHHHHHHHH
Confidence 999988754211 0000000 0001 1235677777765 7889999999999999999999999999
Q ss_pred HhCCCCCCCccEEEEcCCCCCCCc-h-------------hhhHHHHHHHHHHHHHhh
Q 004839 684 RESTIYDPKRPILLNLTTDIVEEN-R-------------YLQCKESALETAFLIKMM 726 (728)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~gH~~~~-~-------------~~~~~~~~~~~afl~~~l 726 (728)
++.+.+ ..+.+++++||++.. . ....+......+||.++.
T Consensus 218 ~~~~~~---~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 218 LQHQVA---TAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHTTCC---EEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHCCCe---EEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 988743 223337899997543 2 223445666789998763
No 22
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.87 E-value=6.6e-21 Score=201.54 Aligned_cols=233 Identities=14% Similarity=0.083 Sum_probs=166.7
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCC-CCcCcccHHHHHHHHH-CCeEEEEEcCCCCCCCC
Q 004839 463 EFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYG-ELLDKRWRSELKSLLD-RGWVVAFADVRGGGGGG 540 (728)
Q Consensus 463 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~-~~~~~~~~~~~~~l~~-~Gy~v~~~d~RG~g~~G 540 (728)
..+..+.+++++.|| .|++.+++|++. +.|+||++|||.. ......|......|++ +||+|+.+|||+++++.
T Consensus 59 ~~~~~~~~~~~~~~g-~i~~~~~~p~~~----~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~ 133 (326)
T 3ga7_A 59 PSMTTRTCAVPTPYG-DVTTRLYSPQPT----SQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQAR 133 (326)
T ss_dssp CCCEEEEEEECCTTS-CEEEEEEESSSS----CSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSC
T ss_pred CCcceEEEEeecCCC-CeEEEEEeCCCC----CCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCC
Confidence 345669999999999 899999999753 2399999999762 1233456667788888 89999999999887642
Q ss_pred CccccccccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhCCCc------eeEEEEeCCccc
Q 004839 541 KKWHHDGRRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCCPDL------FRAVVLEVPFLD 611 (728)
Q Consensus 541 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~~------f~a~v~~~p~~d 611 (728)
....++|+.++++|+.++. .+|++||+|+|+|+||++++.++.+++++ ++++|+.+|+.+
T Consensus 134 -----------~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~ 202 (326)
T 3ga7_A 134 -----------YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYG 202 (326)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCS
T ss_pred -----------CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccc
Confidence 2346899999999999864 46999999999999999999999887764 899999999887
Q ss_pred chhhccCCCCCCCcccccccCC---CCCHHHHHHH---------HccCccc-----ccccCCCCCeEEEEcCCCCCCCHH
Q 004839 612 ATNTLLYPILPLIAADYEEFGY---PGDIDDFHAI---------RNYSPYD-----NIQKDVLYPAVLVTSSFNTRFGVW 674 (728)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~g~---p~~~~~~~~~---------~~~sP~~-----~i~~~~~~P~lli~g~~D~~Vp~~ 674 (728)
...... ...++. ....+....+ ...+|+. .+.+ ...|+|++||+.|..| .
T Consensus 203 ~~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~li~~G~~D~~~--~ 269 (326)
T 3ga7_A 203 LQDSVS----------RRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTR-DVPPCFIASAEFDPLI--D 269 (326)
T ss_dssp CSCCHH----------HHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSS-CCCCEEEEEETTCTTH--H
T ss_pred cCCChh----------HhhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhc-CCCCEEEEecCcCcCH--H
Confidence 643210 000000 0011111111 1123332 2222 4569999999999887 5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc----hhhhHHHHHHHHHHHHHhhc
Q 004839 675 EAAKWVARVRESTIYDPKRPILLNLTTDIVEEN----RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 675 ~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~afl~~~l~ 727 (728)
++.+++++|+++|++ ..+.++++++|++.. .....+......+||.++|+
T Consensus 270 ~~~~~~~~l~~~g~~---~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~ 323 (326)
T 3ga7_A 270 DSRLLHQTLQAHQQP---CEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMK 323 (326)
T ss_dssp HHHHHHHHHHHTTCC---EEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCc---EEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhc
Confidence 899999999999854 233338999999743 23345566778899999874
No 23
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.87 E-value=3.1e-21 Score=208.68 Aligned_cols=221 Identities=13% Similarity=0.061 Sum_probs=167.4
Q ss_pred ceEEEEEEECC-CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccH----------HHHHHHHHCCeEEEEEcC
Q 004839 465 YSCEQYDVPSH-DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWR----------SELKSLLDRGWVVAFADV 533 (728)
Q Consensus 465 ~~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~----------~~~~~l~~~Gy~v~~~d~ 533 (728)
...+.+.+.+. ||..+++.++.|++..+.++.|+||++||+.+........ ........+|+.|+.+|+
T Consensus 142 ~~~~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~ 221 (380)
T 3doh_A 142 DDFLAFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQC 221 (380)
T ss_dssp GGEEEEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECC
T ss_pred ccccceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecC
Confidence 34677889998 9999999999998866677899999999976443221110 112334567899999999
Q ss_pred CCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccch
Q 004839 534 RGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDAT 613 (728)
Q Consensus 534 RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~ 613 (728)
||.+++|..|............++|+.+++++++++..+|++||+++|+|+||++++.++.++|++|+++|+.+|..+.
T Consensus 222 ~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~- 300 (380)
T 3doh_A 222 PPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV- 300 (380)
T ss_dssp CTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG-
T ss_pred CCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh-
Confidence 9999999988876665556678999999999999987899999999999999999999999999999999999996411
Q ss_pred hhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCc
Q 004839 614 NTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKR 693 (728)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~ 693 (728)
..+......|+|++||..|..||+.++.+++++|++++++ .
T Consensus 301 ------------------------------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~---~ 341 (380)
T 3doh_A 301 ------------------------------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGK---V 341 (380)
T ss_dssp ------------------------------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCC---E
T ss_pred ------------------------------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCc---e
Confidence 0112212479999999999999999999999999998853 2
Q ss_pred cEEEEcCC---CCCCCchhhhHHHHH--HHHHHHHHh
Q 004839 694 PILLNLTT---DIVEENRYLQCKESA--LETAFLIKM 725 (728)
Q Consensus 694 ~~~~~~~~---gH~~~~~~~~~~~~~--~~~afl~~~ 725 (728)
.+.+++++ +|++..+........ ..++||.++
T Consensus 342 ~~~~~~~~~h~~h~~~~H~~~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 342 RYTEYEKGFMEKHGWDPHGSWIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp EEEEECTTHHHHTTCCTTCTHHHHHTCHHHHHHHHTC
T ss_pred EEEEecCCcccCCCCCCchhHHHhcCCHHHHHHHHhh
Confidence 22237888 333322212222222 568899875
No 24
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.87 E-value=1.9e-21 Score=223.51 Aligned_cols=251 Identities=14% Similarity=0.156 Sum_probs=177.3
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC------cC-cccHH---HH-HHHHHCCeEEEEE
Q 004839 463 EFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL------LD-KRWRS---EL-KSLLDRGWVVAFA 531 (728)
Q Consensus 463 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~------~~-~~~~~---~~-~~l~~~Gy~v~~~ 531 (728)
..+..+.+.+++.||.+|.++++.|++. ++.|+||+.|| ++.. .. ..|.. .. +.|+++||+|+.+
T Consensus 33 ~~~~~~~v~i~~~DG~~L~~~l~~P~~~---~~~PvIl~~hp-yg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~ 108 (652)
T 2b9v_A 33 RDYIKREVMVPMRDGVKLYTVIVIPKNA---RNAPILLTRTP-YNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQ 108 (652)
T ss_dssp CSEEEEEEEEECTTSCEEEEEEEEETTC---CSEEEEEEEES-SCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEE
T ss_pred CCcEEEEEEEECCCCcEEEEEEEecCCC---CCccEEEEECC-CCCCcccccccccccccccccchHHHHHhCCCEEEEE
Confidence 4577889999999999999999999763 57899999885 2221 10 01111 12 8899999999999
Q ss_pred cCCCCCCCCCccccccc-----cCCCCCcHHHHHHHHHHHHHc-CCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEE
Q 004839 532 DVRGGGGGGKKWHHDGR-----RTKKLNSIKDFISCARFLIEK-EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVL 605 (728)
Q Consensus 532 d~RG~g~~G~~~~~~~~-----~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~ 605 (728)
|+||+|+++..|..... ..++....+|+.++++||.++ +++| .||+++|+||||+++++++.++|+.|+|+|+
T Consensus 109 D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~ 187 (652)
T 2b9v_A 109 DIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAP 187 (652)
T ss_dssp ECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEE
T ss_pred ecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEe
Confidence 99999999888765421 222347899999999999999 8888 5999999999999999999888999999999
Q ss_pred eCCcccchh--hccCCC-CCCC-cccc---------------------------------------------ccc-CCCC
Q 004839 606 EVPFLDATN--TLLYPI-LPLI-AADY---------------------------------------------EEF-GYPG 635 (728)
Q Consensus 606 ~~p~~d~~~--~~~~~~-~~~~-~~~~---------------------------------------------~~~-g~p~ 635 (728)
.+|+.|+.. .+.... ..+. ..++ .++ +.|.
T Consensus 188 ~~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 267 (652)
T 2b9v_A 188 ESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPA 267 (652)
T ss_dssp EEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCS
T ss_pred cccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCC
Confidence 999999753 110000 0000 0000 000 1111
Q ss_pred CHHHHHHHHccCcccccccC--CCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCC--CCCCCccEEEEcCCCCCCCc----
Q 004839 636 DIDDFHAIRNYSPYDNIQKD--VLYPAVLVTSSFNTRFGVWEAAKWVARVREST--IYDPKRPILLNLTTDIVEEN---- 707 (728)
Q Consensus 636 ~~~~~~~~~~~sP~~~i~~~--~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~--~~~~~~~~~~~~~~gH~~~~---- 707 (728)
.-+++.+.||+.++. + |++|+|+|||..|.+ +..++.+++++|++++ ++ ..+++.+ .+|+...
T Consensus 268 ---~d~yw~~~Sp~~~~~-~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~---~~lvigp-~~H~~~~~~~~ 338 (652)
T 2b9v_A 268 ---YDAFWQGQALDKILA-QRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKAP---NTLVMGP-WRHSGVNYNGS 338 (652)
T ss_dssp ---SSHHHHTTCHHHHHH-HHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSSC---EEEEEES-CCTTGGGSCCS
T ss_pred ---CChHHhcCChhhhhh-cCCCCCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCCC---CEEEECC-CCCCCcccccc
Confidence 013456778887765 4 799999999999987 6689999999999887 43 2333344 4797511
Q ss_pred ---------hhhhHHHHHHHHHHHHHhhc
Q 004839 708 ---------RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 708 ---------~~~~~~~~~~~~afl~~~l~ 727 (728)
..........+++||.++|.
T Consensus 339 ~~~~~~f~~~~~~~~~~~~~~~wfd~~Lk 367 (652)
T 2b9v_A 339 TLGPLEFEGDTAHQYRRDVFRPFFDEYLK 367 (652)
T ss_dssp EETTEECSSCHHHHHHHHTHHHHHHHHHS
T ss_pred cCCccccccccchhhhhhHHHHHHHHHhC
Confidence 00112224567899999984
No 25
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.87 E-value=6.4e-21 Score=203.24 Aligned_cols=244 Identities=18% Similarity=0.211 Sum_probs=173.3
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCC
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGK 541 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~ 541 (728)
...+..+.+.+.+.||.+|+++++.|++ .++.|+||++||+.+... .|... ..++++||+|+.+|+||+|+++.
T Consensus 77 ~~~~~~~~~~~~~~~g~~l~~~~~~P~~---~~~~p~vv~~HG~g~~~~--~~~~~-~~~~~~G~~v~~~D~rG~g~s~~ 150 (346)
T 3fcy_A 77 VSFAECYDLYFTGVRGARIHAKYIKPKT---EGKHPALIRFHGYSSNSG--DWNDK-LNYVAAGFTVVAMDVRGQGGQSQ 150 (346)
T ss_dssp BTTEEEEEEEEECGGGCEEEEEEEEESC---SSCEEEEEEECCTTCCSC--CSGGG-HHHHTTTCEEEEECCTTSSSSCC
T ss_pred CCceEEEEEEEEcCCCCEEEEEEEecCC---CCCcCEEEEECCCCCCCC--Chhhh-hHHHhCCcEEEEEcCCCCCCCCC
Confidence 3567889999999999999999999986 367899999999866542 33332 36778999999999999998765
Q ss_pred cccccc------ccCCCC----------CcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEE
Q 004839 542 KWHHDG------RRTKKL----------NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVL 605 (728)
Q Consensus 542 ~~~~~~------~~~~~~----------~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~ 605 (728)
...... ....+. ..++|+.++++++..+..+|++||+++|+|+||.+++.++.++|+ ++++|+
T Consensus 151 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl 229 (346)
T 3fcy_A 151 DVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVS 229 (346)
T ss_dssp CCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEE
T ss_pred CCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEE
Confidence 532210 000111 136899999999998888899999999999999999999999998 999999
Q ss_pred eCCcccchhhccCCCCCC-Ccc---cccccCCC---CCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHH
Q 004839 606 EVPFLDATNTLLYPILPL-IAA---DYEEFGYP---GDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAK 678 (728)
Q Consensus 606 ~~p~~d~~~~~~~~~~~~-~~~---~~~~~g~p---~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~ 678 (728)
.+|+++............ ... .+..+..| .....+..+..+++...+.+ ++.|+|+++|+.|..||+.++.+
T Consensus 230 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-i~~P~lii~G~~D~~~~~~~~~~ 308 (346)
T 3fcy_A 230 EYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKR-IKGDVLMCVGLMDQVCPPSTVFA 308 (346)
T ss_dssp ESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGG-CCSEEEEEEETTCSSSCHHHHHH
T ss_pred CCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHh-cCCCEEEEeeCCCCcCCHHHHHH
Confidence 999865432211111000 000 01111112 11233455556667777776 89999999999999999999999
Q ss_pred HHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHH
Q 004839 679 WVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIK 724 (728)
Q Consensus 679 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~ 724 (728)
+++++.. . ..+.+++++||++.. +......+||.+
T Consensus 309 ~~~~~~~-~-----~~~~~~~~~gH~~~~-----~~~~~i~~fl~~ 343 (346)
T 3fcy_A 309 AYNNIQS-K-----KDIKVYPDYGHEPMR-----GFGDLAMQFMLE 343 (346)
T ss_dssp HHTTCCS-S-----EEEEEETTCCSSCCT-----THHHHHHHHHHT
T ss_pred HHHhcCC-C-----cEEEEeCCCCCcCHH-----HHHHHHHHHHHH
Confidence 9888864 2 234448999999762 123446788865
No 26
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.86 E-value=3.2e-20 Score=199.24 Aligned_cols=243 Identities=12% Similarity=0.041 Sum_probs=163.6
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEE-cCCC--------------------CCCCCccEEEEEcCCCCC---CcCcccHHH
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIY-SPKY--------------------KKENQNPGLLHGHGAYGE---LLDKRWRSE 517 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~-p~~~--------------------~~~~~~P~vv~~hGg~~~---~~~~~~~~~ 517 (728)
...+..+.+.+.+.|| +.+.++. |.+. ...++.|+||++|||... .....|...
T Consensus 59 ~~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~ 136 (365)
T 3ebl_A 59 LEGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSL 136 (365)
T ss_dssp BTTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHH
T ss_pred CCCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHH
Confidence 4567889999999999 6666776 7653 234678999999997432 222335667
Q ss_pred HHHHHHC-CeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcC----CCCCC-cEEEEEeCccHHHHHH
Q 004839 518 LKSLLDR-GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKE----IVKEH-KLAGWGYSAGGLLVAA 591 (728)
Q Consensus 518 ~~~l~~~-Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-ri~i~G~S~GG~~~~~ 591 (728)
.+.|+++ ||+|+.+|||++++.. ....++|+.++++||.++. .+|++ ||+|+|+|+||++++.
T Consensus 137 ~~~la~~~g~~Vv~~dyR~~p~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~ 205 (365)
T 3ebl_A 137 CRRFVKLSKGVVVSVNYRRAPEHR-----------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHH 205 (365)
T ss_dssp HHHHHHHHTSEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHH
T ss_pred HHHHHHHCCCEEEEeeCCCCCCCC-----------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHH
Confidence 7888886 9999999999887532 2346899999999999775 57999 9999999999999999
Q ss_pred HHHhCCC---ceeEEEEeCCcccchhhcc----CCCCCC-Ccc---cc-ccc-CCCCCHHHHHHHHccCccc-ccccCCC
Q 004839 592 AINCCPD---LFRAVVLEVPFLDATNTLL----YPILPL-IAA---DY-EEF-GYPGDIDDFHAIRNYSPYD-NIQKDVL 657 (728)
Q Consensus 592 ~~~~~p~---~f~a~v~~~p~~d~~~~~~----~~~~~~-~~~---~~-~~~-g~p~~~~~~~~~~~~sP~~-~i~~~~~ 657 (728)
++.+.++ .++++|+.+|+++...... ....+. ... ++ ..+ +...... ....+|+. .... ++
T Consensus 206 ~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~-l~ 280 (365)
T 3ebl_A 206 VAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRD----HPACNPFGPNGRR-LG 280 (365)
T ss_dssp HHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTT----STTTCTTSTTCCC-CT
T ss_pred HHHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCC----CcccCCCCCcchh-hc
Confidence 9887665 7999999999988643110 000000 000 00 000 0000000 01123442 1122 33
Q ss_pred ----CCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCC---chhhhHHHHHHHHHHHHHhhc
Q 004839 658 ----YPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEE---NRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 658 ----~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~~~~~afl~~~l~ 727 (728)
.|+|++||+.|.. ..++.+++++|+++|++ ..+.++++++|++. ......+....+.+||.+++.
T Consensus 281 ~~~~pP~Li~~G~~D~l--~~~~~~~~~~L~~~g~~---v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~ 352 (365)
T 3ebl_A 281 GLPFAKSLIIVSGLDLT--CDRQLAYADALREDGHH---VKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLY 352 (365)
T ss_dssp TSCCCCEEEEEETTSTT--HHHHHHHHHHHHHTTCC---EEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCEEEEEcCcccc--hhHHHHHHHHHHHCCCC---EEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhh
Confidence 4789999999954 45679999999998854 23333899999865 234555667778999999874
No 27
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.86 E-value=2.5e-21 Score=200.10 Aligned_cols=234 Identities=11% Similarity=0.043 Sum_probs=166.0
Q ss_pred ceEEEEEEECCCCcEEEEEEEEcCCC---CCCCCccEEEEEcCCCC-CCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCC
Q 004839 465 YSCEQYDVPSHDGISVPLTIIYSPKY---KKENQNPGLLHGHGAYG-ELLDKRWRSELKSLLDRGWVVAFADVRGGGGGG 540 (728)
Q Consensus 465 ~~~~~~~~~s~dG~~i~~~l~~p~~~---~~~~~~P~vv~~hGg~~-~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G 540 (728)
...+.+.+...+|..+.+.++ |+.. ..+++.|+||++|||.. ......|......|+++||.|+.+|+||+++.+
T Consensus 17 ~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~ 95 (283)
T 3bjr_A 17 FQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQ 95 (283)
T ss_dssp CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCS
T ss_pred CCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccc
Confidence 344567788889988888887 7642 13467899999999642 222344666778899999999999999988753
Q ss_pred CccccccccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhCCCc-------------eeEEE
Q 004839 541 KKWHHDGRRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCCPDL-------------FRAVV 604 (728)
Q Consensus 541 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~~-------------f~a~v 604 (728)
. .......|+.++++++.+.. .+|+++|+++|+|+||++++.++.++|++ ++++|
T Consensus 96 ~---------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v 166 (283)
T 3bjr_A 96 P---------LGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVV 166 (283)
T ss_dssp S---------CBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEE
T ss_pred c---------CchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEE
Confidence 1 12246789999999998753 46888999999999999999999999987 89999
Q ss_pred EeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHH
Q 004839 605 LEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVR 684 (728)
Q Consensus 605 ~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~ 684 (728)
+.+|+.++...+.... ..+..+ ...+...+|...+.+ +..|+|+++|..|..||+.++.+++++|+
T Consensus 167 ~~~p~~~~~~~~~~~~-----~~~~~~--------~~~~~~~~~~~~~~~-~~~P~lii~G~~D~~~p~~~~~~~~~~l~ 232 (283)
T 3bjr_A 167 LGYPVISPLLGFPKDD-----ATLATW--------TPTPNELAADQHVNS-DNQPTFIWTTADDPIVPATNTLAYATALA 232 (283)
T ss_dssp EESCCCCTTSBC-------------CC--------CCCGGGGCGGGSCCT-TCCCEEEEEESCCTTSCTHHHHHHHHHHH
T ss_pred EcCCcccccccccccc-----chHHHH--------HHHhHhcCHHHhccC-CCCCEEEEEcCCCCCCChHHHHHHHHHHH
Confidence 9999887542210000 000000 001245577777766 78999999999999999999999999999
Q ss_pred hCCCCCCCccEEEEcCCCCCCCc-hh-----------hhHHHHHHHHHHHHHh
Q 004839 685 ESTIYDPKRPILLNLTTDIVEEN-RY-----------LQCKESALETAFLIKM 725 (728)
Q Consensus 685 ~~~~~~~~~~~~~~~~~gH~~~~-~~-----------~~~~~~~~~~afl~~~ 725 (728)
..+.+ ..+.+++++||++.. .. ...+......+||.++
T Consensus 233 ~~g~~---~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 233 TAKIP---YELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HTTCC---EEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HCCCC---eEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 88743 233338999997543 21 1234455667888764
No 28
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.85 E-value=3.6e-20 Score=187.87 Aligned_cols=239 Identities=14% Similarity=0.127 Sum_probs=158.3
Q ss_pred EEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCcccccccc
Q 004839 470 YDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRR 549 (728)
Q Consensus 470 ~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~ 549 (728)
+.+. .||.+|+++++.|++. .++.|+||++||..+......|....+.|+++||.|+.+|+||+|.+.......
T Consensus 4 ~~~~-~~g~~l~~~~~~p~~~--~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~--- 77 (251)
T 2wtm_A 4 MYID-CDGIKLNAYLDMPKNN--PEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDH--- 77 (251)
T ss_dssp EEEE-ETTEEEEEEEECCTTC--CSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGC---
T ss_pred eEEe-cCCcEEEEEEEccCCC--CCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccccC---
Confidence 3444 4899999988877642 245789999999766532456777788999999999999999999764322110
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccC----C-CC-CC
Q 004839 550 TKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLY----P-IL-PL 623 (728)
Q Consensus 550 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~----~-~~-~~ 623 (728)
......+|+.++++++.++..+ +++.++||||||.+++.++.++|++++++|+.+|...+...... . .. +.
T Consensus 78 -~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 154 (251)
T 2wtm_A 78 -TLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPE 154 (251)
T ss_dssp -CHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECBTT
T ss_pred -CHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCCch
Confidence 0112356777778887655433 48999999999999999999999999999999997654321100 0 00 00
Q ss_pred Cccccc-cc-CCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCC
Q 004839 624 IAADYE-EF-GYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTT 701 (728)
Q Consensus 624 ~~~~~~-~~-g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 701 (728)
...... .+ +..........+...++...+.+ ++.|+|+|+|+.|..||+..+.++++.+.. ..+..++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~lii~G~~D~~v~~~~~~~~~~~~~~-------~~~~~~~~~ 226 (251)
T 2wtm_A 155 NIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDK-YTKPVLIVHGDQDEAVPYEASVAFSKQYKN-------CKLVTIPGD 226 (251)
T ss_dssp BCCSEEEETTTEEEETHHHHHHTTCCHHHHHHH-CCSCEEEEEETTCSSSCHHHHHHHHHHSSS-------EEEEEETTC
T ss_pred hcchHHhhhhccccchHHHHHHHccCHHHHHHh-cCCCEEEEEeCCCCCcChHHHHHHHHhCCC-------cEEEEECCC
Confidence 000000 11 10001112333334445555565 899999999999999999999998887742 233337999
Q ss_pred CCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 702 DIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 702 gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
||.. . +..-+......+||.++|.
T Consensus 227 gH~~-~-~~~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 227 THCY-D-HHLELVTEAVKEFMLEQIA 250 (251)
T ss_dssp CTTC-T-TTHHHHHHHHHHHHHHHHC
T ss_pred Cccc-c-hhHHHHHHHHHHHHHHhcc
Confidence 9998 3 2222334556899988763
No 29
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.85 E-value=3.2e-20 Score=199.06 Aligned_cols=247 Identities=14% Similarity=0.107 Sum_probs=170.8
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccH-HHHHHHHHCCeEEEEEcCCCCCCCC
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWR-SELKSLLDRGWVVAFADVRGGGGGG 540 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~-~~~~~l~~~Gy~v~~~d~RG~g~~G 540 (728)
...+..+.+.+.+.||..++++++.|++ .+.++.|+||++||+.+.. ..|. .....|+++||.|+.+|+||+|...
T Consensus 63 ~~~~~~~~~~~~~~~g~~~~~~~~~p~~-~~~~~~p~vv~~hG~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~ 139 (367)
T 2hdw_A 63 SAKVEHRKVTFANRYGITLAADLYLPKN-RGGDRLPAIVIGGPFGAVK--EQSSGLYAQTMAERGFVTLAFDPSYTGESG 139 (367)
T ss_dssp CTTEEEEEEEEECTTSCEEEEEEEEESS-CCSSCEEEEEEECCTTCCT--TSHHHHHHHHHHHTTCEEEEECCTTSTTSC
T ss_pred CCCceeEEEEEecCCCCEEEEEEEeCCC-CCCCCCCEEEEECCCCCcc--hhhHHHHHHHHHHCCCEEEEECCCCcCCCC
Confidence 4457889999999999999999999987 3356789999999976543 3344 3678899999999999999998764
Q ss_pred CccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccC--
Q 004839 541 KKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLY-- 618 (728)
Q Consensus 541 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~-- 618 (728)
..... ........+|+.++++++.++..+|++||+++|+|+||.+++.++.++| .++++|+.+|+. .......
T Consensus 140 ~~~~~---~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~-~~~~~~~~~ 214 (367)
T 2hdw_A 140 GQPRN---VASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYD-MTRVMSKGY 214 (367)
T ss_dssp CSSSS---CCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCC-HHHHHHHTT
T ss_pred CcCcc---ccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEecccc-ccHHHhhhh
Confidence 33211 1112246789999999999998889999999999999999999999888 589999999863 2110000
Q ss_pred --------------------------------CCCC---CCc--------ccccc----------cCCCCCHHHHHHHHc
Q 004839 619 --------------------------------PILP---LIA--------ADYEE----------FGYPGDIDDFHAIRN 645 (728)
Q Consensus 619 --------------------------------~~~~---~~~--------~~~~~----------~g~p~~~~~~~~~~~ 645 (728)
+..| ... ..+.. +...+.......+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (367)
T 2hdw_A 215 NDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMN 294 (367)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTT
T ss_pred ccccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcC
Confidence 0000 000 00000 001111122455667
Q ss_pred cCcccccccCCC-CCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHH
Q 004839 646 YSPYDNIQKDVL-YPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN-RYLQCKESALETAFLI 723 (728)
Q Consensus 646 ~sP~~~i~~~~~-~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~ 723 (728)
++|...+.+ ++ .|+|+++|+.|. ++.++.+++++ .+.+ ..+.+++++||+... ..... ......+||.
T Consensus 295 ~~~~~~~~~-i~~~PvLii~G~~D~--~~~~~~~~~~~---~~~~---~~~~~~~g~gH~~~~~~~~~~-~~~~i~~fl~ 364 (367)
T 2hdw_A 295 MPILTYIKE-ISPRPILLIHGERAH--SRYFSETAYAA---AAEP---KELLIVPGASHVDLYDRLDRI-PFDRIAGFFD 364 (367)
T ss_dssp SCSCTTGGG-GTTSCEEEEEETTCT--THHHHHHHHHH---SCSS---EEEEEETTCCTTHHHHCTTTS-CHHHHHHHHH
T ss_pred CChhHhHHh-hcCCceEEEecCCCC--CHHHHHHHHHh---CCCC---eeEEEeCCCCeeeeecCchhH-HHHHHHHHHH
Confidence 788888876 78 999999999998 88888888877 3321 233338999997432 22211 3455679998
Q ss_pred Hhh
Q 004839 724 KMM 726 (728)
Q Consensus 724 ~~l 726 (728)
++|
T Consensus 365 ~~l 367 (367)
T 2hdw_A 365 EHL 367 (367)
T ss_dssp HHC
T ss_pred hhC
Confidence 875
No 30
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.85 E-value=1e-20 Score=200.99 Aligned_cols=246 Identities=11% Similarity=0.040 Sum_probs=158.8
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCC-CCCCCccEEEEEcCCCCCC---cCcccHHHHHHHH-HCCeEEEEEcCCCCC
Q 004839 463 EFYSCEQYDVPSHDGISVPLTIIYSPKY-KKENQNPGLLHGHGAYGEL---LDKRWRSELKSLL-DRGWVVAFADVRGGG 537 (728)
Q Consensus 463 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~-~~~~~~P~vv~~hGg~~~~---~~~~~~~~~~~l~-~~Gy~v~~~d~RG~g 537 (728)
..+..+.+.+.+ |..+.+.++.|++. ..+++.|+||++|||.... ....|......|+ ++||+|+.+|+||++
T Consensus 51 ~~v~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~ 128 (338)
T 2o7r_A 51 SPVLTKDLALNP--LHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAP 128 (338)
T ss_dssp CSEEEEEEEEET--TTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred CCEEEEEEEecC--CCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCC
Confidence 457788888876 45577788888764 3457789999999975322 1123666778888 789999999999987
Q ss_pred CCCCccccccccCCCCCcHHHHHHHHHHHHHcC------CCCCCcEEEEEeCccHHHHHHHHHhCCC--------ceeEE
Q 004839 538 GGGKKWHHDGRRTKKLNSIKDFISCARFLIEKE------IVKEHKLAGWGYSAGGLLVAAAINCCPD--------LFRAV 603 (728)
Q Consensus 538 ~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~------~~d~~ri~i~G~S~GG~~~~~~~~~~p~--------~f~a~ 603 (728)
++. ....++|+.++++||.++. .+|++|++++|+|+||++++.++.++|+ +++++
T Consensus 129 ~~~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~ 197 (338)
T 2o7r_A 129 EHR-----------LPAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGL 197 (338)
T ss_dssp TTC-----------TTHHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEE
T ss_pred CCC-----------CchHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEE
Confidence 641 2347899999999999763 2678999999999999999999998888 89999
Q ss_pred EEeCCcccchhhcc----CCCCCC-Ccc---c-ccc-c--CCCCCHHHHHHHHccCcc---cccccCCCCCeEEEEcCCC
Q 004839 604 VLEVPFLDATNTLL----YPILPL-IAA---D-YEE-F--GYPGDIDDFHAIRNYSPY---DNIQKDVLYPAVLVTSSFN 668 (728)
Q Consensus 604 v~~~p~~d~~~~~~----~~~~~~-~~~---~-~~~-~--g~p~~~~~~~~~~~~sP~---~~i~~~~~~P~lli~g~~D 668 (728)
|+.+|+.+...... ....+. ... + +.. . +...+......+...+|+ ..+.+ +..|+|+++|+.|
T Consensus 198 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~P~Lvi~G~~D 276 (338)
T 2o7r_A 198 VLDEPGFGGSKRTGSELRLANDSRLPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRS-LGWRVMVVGCHGD 276 (338)
T ss_dssp EEESCCCCCSSCCHHHHHTTTCSSSCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHH-HTCEEEEEEETTS
T ss_pred EEECCccCCCcCChhhhccCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcC-CCCCEEEEECCCC
Confidence 99999877543110 000000 000 0 000 0 000000000000001111 11222 4559999999999
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc--hhhhHHHHHHHHHHHHHhhc
Q 004839 669 TRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN--RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 669 ~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~afl~~~l~ 727 (728)
..|+ ++.+++++|++.+.+ ..+.+++++||++.. .....+....+.+||.++++
T Consensus 277 ~~~~--~~~~~~~~l~~~~~~---~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~ 332 (338)
T 2o7r_A 277 PMID--RQMELAERLEKKGVD---VVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCT 332 (338)
T ss_dssp TTHH--HHHHHHHHHHHTTCE---EEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC----
T ss_pred cchH--HHHHHHHHHHHCCCc---EEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhcc
Confidence 8886 678899999987742 222338999998643 33334456667899988763
No 31
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.85 E-value=1.5e-19 Score=183.06 Aligned_cols=208 Identities=9% Similarity=0.031 Sum_probs=155.1
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCC---CCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCc
Q 004839 466 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYG---ELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKK 542 (728)
Q Consensus 466 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~---~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~ 542 (728)
+.+.+.+++.|| +|.++++.|.+ ++.|+||++||..+ ......|......|+++||.|+.+|+||+|.....
T Consensus 22 e~~~~~~~~~~g-~l~~~~~~p~~----~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~ 96 (249)
T 2i3d_A 22 HMPEVIFNGPAG-RLEGRYQPSKE----KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGE 96 (249)
T ss_dssp --CEEEEEETTE-EEEEEEECCSS----TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC
T ss_pred ceeEEEEECCCc-eEEEEEEcCCC----CCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
Confidence 333899999999 89998776643 45699999998532 22223346677899999999999999999876433
Q ss_pred cccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCC
Q 004839 543 WHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILP 622 (728)
Q Consensus 543 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~ 622 (728)
+. .....++|+.++++++.+++. ++++++++|+|+||++++.++.++|+ ++++|+.+|..+...
T Consensus 97 ~~------~~~~~~~d~~~~i~~l~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-------- 160 (249)
T 2i3d_A 97 FD------HGAGELSDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD-------- 160 (249)
T ss_dssp CC------SSHHHHHHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC--------
T ss_pred CC------CccchHHHHHHHHHHHHHhCC-CCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh--------
Confidence 22 123456899999999988754 77899999999999999999999998 999999999765311
Q ss_pred CCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhC-CCCCCCccEEEEcCC
Q 004839 623 LIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRES-TIYDPKRPILLNLTT 701 (728)
Q Consensus 623 ~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~ 701 (728)
...+.+ ++.|+|+++|..|..||+.++.+++++++.. +.. ..+.+++++
T Consensus 161 --------------------------~~~~~~-~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~ 210 (249)
T 2i3d_A 161 --------------------------FSFLAP-CPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGIL---ITHRTLPGA 210 (249)
T ss_dssp --------------------------CTTCTT-CCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCC---EEEEEETTC
T ss_pred --------------------------hhhhcc-cCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCc---eeEEEECCC
Confidence 111233 6889999999999999999999999999863 211 233337899
Q ss_pred CCCCCchhhhHHHHHHHHHHHHHhh
Q 004839 702 DIVEENRYLQCKESALETAFLIKMM 726 (728)
Q Consensus 702 gH~~~~~~~~~~~~~~~~afl~~~l 726 (728)
||.... ..-.......+||.+++
T Consensus 211 ~H~~~~--~~~~~~~~i~~fl~~~l 233 (249)
T 2i3d_A 211 NHFFNG--KVDELMGECEDYLDRRL 233 (249)
T ss_dssp CTTCTT--CHHHHHHHHHHHHHHHH
T ss_pred Cccccc--CHHHHHHHHHHHHHHhc
Confidence 998753 22223455678998876
No 32
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.84 E-value=3.6e-20 Score=194.99 Aligned_cols=235 Identities=16% Similarity=0.064 Sum_probs=166.0
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCC-CCCcCcccHHHHHHHHH-CCeEEEEEcCCCCCCCC
Q 004839 463 EFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAY-GELLDKRWRSELKSLLD-RGWVVAFADVRGGGGGG 540 (728)
Q Consensus 463 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~-~~~~~~~~~~~~~~l~~-~Gy~v~~~d~RG~g~~G 540 (728)
..+..+.+++++.||..|++.++.|.+ ++.|+||++|||. .......+......|++ .||+|+.+|||+++++.
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~----~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~ 131 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHP 131 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC----CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 456788999999999999999999975 4689999999953 33333456677777875 59999999999887642
Q ss_pred CccccccccCCCCCcHHHHHHHHHHHHHc---CCCCCCcEEEEEeCccHHHHHHHHHhCCC----ceeEEEEeCCcccch
Q 004839 541 KKWHHDGRRTKKLNSIKDFISCARFLIEK---EIVKEHKLAGWGYSAGGLLVAAAINCCPD----LFRAVVLEVPFLDAT 613 (728)
Q Consensus 541 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~~p~----~f~a~v~~~p~~d~~ 613 (728)
....++|+.++++|+.++ ..+|++||+|+|+|+||++++.++.++++ .++++|+.+|++|..
T Consensus 132 -----------~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 200 (317)
T 3qh4_A 132 -----------YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR 200 (317)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS
T ss_pred -----------CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC
Confidence 234689999999999985 45789999999999999999999886555 489999999998864
Q ss_pred hhccCCCCCCCcccccccC--CCCCHHH----HHHHH-------ccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHH
Q 004839 614 NTLLYPILPLIAADYEEFG--YPGDIDD----FHAIR-------NYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWV 680 (728)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~g--~p~~~~~----~~~~~-------~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~ 680 (728)
... .+.++. ....... ...+. ..+|.....-..-.|+|++||+.|..++ ++.+++
T Consensus 201 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~lpP~li~~G~~D~~~~--~~~~~a 268 (317)
T 3qh4_A 201 PTA----------SRSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRRGQLAGLPATLITCGEIDPFRD--EVLDYA 268 (317)
T ss_dssp CCH----------HHHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGCSCCTTCCCEEEEEEEESTTHH--HHHHHH
T ss_pred CCc----------CHHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCcccccCCCCceeEEecCcCCCch--hHHHHH
Confidence 110 000110 0011111 11111 1233322111112489999999998765 899999
Q ss_pred HHHHhCCCCCCCccEEEEcCCCCCCCc----hhhhHHHHHHHHHHHHHhhc
Q 004839 681 ARVRESTIYDPKRPILLNLTTDIVEEN----RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 681 ~~L~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~afl~~~l~ 727 (728)
++|++++++ ..+.++++++|++.. .....+......+||.++|+
T Consensus 269 ~~l~~~g~~---~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 269 QRLLGAGVS---TELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHHHTTCC---EEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCC---EEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 999999854 233338999998542 23445556777899999885
No 33
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.84 E-value=6.5e-21 Score=197.37 Aligned_cols=237 Identities=16% Similarity=0.114 Sum_probs=165.1
Q ss_pred ceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccc
Q 004839 465 YSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWH 544 (728)
Q Consensus 465 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~ 544 (728)
...+.+.+++ ||.++.++++.|+ +.|+||++||+.+.. ..|......|+++||.|+.+|+||+|.+.....
T Consensus 4 ~~~~~~~~~~-~g~~l~~~~~~p~------~~p~vv~~HG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~ 74 (290)
T 3ksr_A 4 AKLSSIEIPV-GQDELSGTLLTPT------GMPGVLFVHGWGGSQ--HHSLVRAREAVGLGCICMTFDLRGHEGYASMRQ 74 (290)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEEEE------SEEEEEEECCTTCCT--TTTHHHHHHHHTTTCEEECCCCTTSGGGGGGTT
T ss_pred CceeeEEecC-CCeEEEEEEecCC------CCcEEEEeCCCCCCc--CcHHHHHHHHHHCCCEEEEeecCCCCCCCCCcc
Confidence 3466777877 7889999999886 569999999987643 457778889999999999999999997644322
Q ss_pred cccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCC
Q 004839 545 HDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLI 624 (728)
Q Consensus 545 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~ 624 (728)
.. ......+|+.++++++.+++.+|+++|+++|+|+||++++.++.++| ++++++.+|.......+..+.....
T Consensus 75 ~~----~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~~~~ 148 (290)
T 3ksr_A 75 SV----TRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKVSLN 148 (290)
T ss_dssp TC----BHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHHHHH
T ss_pred cc----cHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhccccccc
Confidence 11 11234689999999999888889999999999999999999999888 7788888887654321110000000
Q ss_pred -ccccccc-CCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCC
Q 004839 625 -AADYEEF-GYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTD 702 (728)
Q Consensus 625 -~~~~~~~-g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~g 702 (728)
......+ ..+... ...++...+.+ ++.|+|+++|..|..||+.++.+++++++..+ + ..+.+++++|
T Consensus 149 ~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~---~~~~~~~~~g 217 (290)
T 3ksr_A 149 ADPDLMDYRRRALAP------GDNLALAACAQ-YKGDVLLVEAENDVIVPHPVMRNYADAFTNAR-S---LTSRVIAGAD 217 (290)
T ss_dssp HSTTHHHHTTSCCCG------GGCHHHHHHHH-CCSEEEEEEETTCSSSCHHHHHHHHHHTTTSS-E---EEEEEETTCC
T ss_pred CChhhhhhhhhhhhh------ccccHHHHHHh-cCCCeEEEEecCCcccChHHHHHHHHHhccCC-C---ceEEEcCCCC
Confidence 0000000 111110 11122233444 78899999999999999999999999998754 1 2233389999
Q ss_pred CCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 703 IVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 703 H~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
|.+..............+||.++++
T Consensus 218 H~~~~~~~~~~~~~~i~~fl~~~~~ 242 (290)
T 3ksr_A 218 HALSVKEHQQEYTRALIDWLTEMVV 242 (290)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHhc
Confidence 9865433333445567899988763
No 34
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.84 E-value=2.5e-20 Score=186.40 Aligned_cols=210 Identities=13% Similarity=0.098 Sum_probs=155.4
Q ss_pred EEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccc-c-
Q 004839 470 YDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHD-G- 547 (728)
Q Consensus 470 ~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~-~- 547 (728)
+.+++.||..+.++++.|++ ++.|+||++||..+.. ..|......|+++||.|+.+|+||+|..+..+... .
T Consensus 6 ~~~~~~~g~~l~~~~~~p~~----~~~p~vv~~hG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~ 79 (236)
T 1zi8_A 6 ISIQSYDGHTFGALVGSPAK----APAPVIVIAQDIFGVN--AFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDER 79 (236)
T ss_dssp CCEECTTSCEECEEEECCSS----CSEEEEEEECCTTBSC--HHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHH
T ss_pred EEEecCCCCeEEEEEECCCC----CCCCEEEEEcCCCCCC--HHHHHHHHHHHhCCcEEEeccccccCCCcccccccchh
Confidence 45788899999998887763 5679999999976643 45667788999999999999999999765532211 0
Q ss_pred ---------ccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccC
Q 004839 548 ---------RRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLY 618 (728)
Q Consensus 548 ---------~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~ 618 (728)
.........+|+.++++++.++..++ ++|+++|+|+||.+++.++.++| ++++|+.+|....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~------ 150 (236)
T 1zi8_A 80 QREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE------ 150 (236)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG------
T ss_pred hhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc------
Confidence 00011224678888999998776555 69999999999999999999888 8899887773210
Q ss_pred CCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEE
Q 004839 619 PILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLN 698 (728)
Q Consensus 619 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~ 698 (728)
++...+.+ ++.|+|+++|+.|..||+.++.+++++++..+ + ..+..+
T Consensus 151 ----------------------------~~~~~~~~-~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~---~~~~~~ 197 (236)
T 1zi8_A 151 ----------------------------KQLNKVPE-VKHPALFHMGGQDHFVPAPSRQLITEGFGANP-L---LQVHWY 197 (236)
T ss_dssp ----------------------------GCGGGGGG-CCSCEEEEEETTCTTSCHHHHHHHHHHHTTCT-T---EEEEEE
T ss_pred ----------------------------cchhhhhh-cCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC-C---ceEEEE
Confidence 12233444 78899999999999999999999999997644 1 233337
Q ss_pred cCCCCCCCch-------hhhHHHHHHHHHHHHHhhc
Q 004839 699 LTTDIVEENR-------YLQCKESALETAFLIKMME 727 (728)
Q Consensus 699 ~~~gH~~~~~-------~~~~~~~~~~~afl~~~l~ 727 (728)
+++||++... ....+......+||.++|.
T Consensus 198 ~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 233 (236)
T 1zi8_A 198 EEAGHSFARTGSSGYVASAAALANERTLDFLVPLQS 233 (236)
T ss_dssp TTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcC
Confidence 8999986542 1223345567899998874
No 35
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.84 E-value=1.3e-19 Score=198.64 Aligned_cols=224 Identities=16% Similarity=0.040 Sum_probs=159.1
Q ss_pred EEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHH
Q 004839 479 SVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKD 558 (728)
Q Consensus 479 ~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D 558 (728)
.+.++++.|++ .++.|+||++||+.+.. +....+.|+++||+|+.+|+||+|+....+. ....+|
T Consensus 144 ~l~~~l~~P~~---~~~~P~Vv~~hG~~~~~----~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~~--------~~~~~d 208 (422)
T 3k2i_A 144 RVRATLFLPPG---PGPFPGIIDIFGIGGGL----LEYRASLLAGHGFATLALAYYNFEDLPNNMD--------NISLEY 208 (422)
T ss_dssp TEEEEEEECSS---SCCBCEEEEECCTTCSC----CCHHHHHHHTTTCEEEEEECSSSTTSCSSCS--------CEETHH
T ss_pred cEEEEEEcCCC---CCCcCEEEEEcCCCcch----hHHHHHHHHhCCCEEEEEccCCCCCCCCCcc--------cCCHHH
Confidence 68999999975 35689999999986542 3445788999999999999999886543322 246899
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc---c---CCCCCCCcc------
Q 004839 559 FISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL---L---YPILPLIAA------ 626 (728)
Q Consensus 559 ~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~---~---~~~~~~~~~------ 626 (728)
+.+++++|.++..+|+++|+++|+|+||++++.++.++|+ ++++|+.+|........ . .+..+....
T Consensus 209 ~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (422)
T 3k2i_A 209 FEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAF 287 (422)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEECT
T ss_pred HHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccCc
Confidence 9999999999988999999999999999999999999998 89999988876432110 0 000000000
Q ss_pred -----cccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHH-HHHHHHHHhCCCCCCCccEEEEcC
Q 004839 627 -----DYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEA-AKWVARVRESTIYDPKRPILLNLT 700 (728)
Q Consensus 627 -----~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~-~~~~~~L~~~~~~~~~~~~~~~~~ 700 (728)
....+..+... ...++...+.+ ++.|+|+|+|+.|..||..+. .++.++|++++++. ..+.++++
T Consensus 288 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~-i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~--~~l~~~~g 358 (422)
T 3k2i_A 288 SGLVDIVDIRNALVGG------YKNPSMIPIEK-AQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEK--PQIICYPG 358 (422)
T ss_dssp TSCEECTTCBCCCTTG------GGSTTBCCGGG-CCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCC--CEEEEETT
T ss_pred chhHHHHHHHhhhhhc------ccccccccHHH-CCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCC--CEEEEECC
Confidence 00011112110 11223334555 789999999999999999876 68899999988541 23333899
Q ss_pred CCCCCCc---------------------------hhhhHHHHHHHHHHHHHhhc
Q 004839 701 TDIVEEN---------------------------RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 701 ~gH~~~~---------------------------~~~~~~~~~~~~afl~~~l~ 727 (728)
+||++.. ...+.+.+..+.+||.++|+
T Consensus 359 agH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~ 412 (422)
T 3k2i_A 359 TGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLG 412 (422)
T ss_dssp CCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999721 23455567778999999985
No 36
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.84 E-value=5.5e-20 Score=181.95 Aligned_cols=216 Identities=13% Similarity=0.100 Sum_probs=154.1
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCc
Q 004839 463 EFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKK 542 (728)
Q Consensus 463 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~ 542 (728)
..+..+.+.+++ ||.++.++++.|++ +.|+||++||+.+......+....+.|+++||.|+.+|+||.|.....
T Consensus 8 ~~~~~~~~~~~~-~g~~l~~~~~~p~~-----~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~ 81 (223)
T 2o2g_A 8 HQPQEYAVSVSV-GEVKLKGNLVIPNG-----ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEID 81 (223)
T ss_dssp CCCCEEEEEEEE-TTEEEEEEEECCTT-----CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHH
T ss_pred CCceeeEEEEec-CCeEEEEEEecCCC-----CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCcc
Confidence 345678888886 99999998887763 469999999976655433455677889999999999999998753211
Q ss_pred cccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCC
Q 004839 543 WHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILP 622 (728)
Q Consensus 543 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~ 622 (728)
..............+|+.++++++..++.+|+++++++|+|+||.+++.++.++|++++++|+.+|..++..
T Consensus 82 ~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~-------- 153 (223)
T 2o2g_A 82 LRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLAP-------- 153 (223)
T ss_dssp HHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGCT--------
T ss_pred chhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcCH--------
Confidence 110000011112357888899999988888999999999999999999999999999999999998654310
Q ss_pred CCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCC
Q 004839 623 LIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTD 702 (728)
Q Consensus 623 ~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~g 702 (728)
..+.+ ++.|+|+++|..|..||. +..+ .+++.+.+ ..+..++++|
T Consensus 154 ---------------------------~~~~~-~~~P~l~i~g~~D~~~~~-~~~~---~~~~~~~~---~~~~~~~~~~ 198 (223)
T 2o2g_A 154 ---------------------------SALPH-VKAPTLLIVGGYDLPVIA-MNED---ALEQLQTS---KRLVIIPRAS 198 (223)
T ss_dssp ---------------------------TTGGG-CCSCEEEEEETTCHHHHH-HHHH---HHHHCCSS---EEEEEETTCC
T ss_pred ---------------------------HHHhc-CCCCEEEEEccccCCCCH-HHHH---HHHhhCCC---eEEEEeCCCC
Confidence 12333 678999999999988863 3333 33333321 2333378999
Q ss_pred CCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 703 IVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 703 H~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
|.+..............+||.++|.
T Consensus 199 H~~~~~~~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 199 HLFEEPGALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp TTCCSTTHHHHHHHHHHHHHHHHCC
T ss_pred cccCChHHHHHHHHHHHHHHHHhcC
Confidence 9865433334445667899998873
No 37
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.83 E-value=3.1e-19 Score=196.95 Aligned_cols=224 Identities=15% Similarity=0.112 Sum_probs=157.9
Q ss_pred EEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHH
Q 004839 479 SVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKD 558 (728)
Q Consensus 479 ~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D 558 (728)
.+.++++.|++ .++.|+||++||+.+.. +....+.|+++||+|+.+|+||+++...... ...++|
T Consensus 160 ~l~~~l~~P~~---~~~~P~Vv~lhG~~~~~----~~~~a~~La~~Gy~Vla~D~rG~~~~~~~~~--------~~~~~d 224 (446)
T 3hlk_A 160 RVRGTLFLPPE---PGPFPGIVDMFGTGGGL----LEYRASLLAGKGFAVMALAYYNYEDLPKTME--------TLHLEY 224 (446)
T ss_dssp TEEEEEEECSS---SCCBCEEEEECCSSCSC----CCHHHHHHHTTTCEEEEECCSSSTTSCSCCS--------EEEHHH
T ss_pred eEEEEEEeCCC---CCCCCEEEEECCCCcch----hhHHHHHHHhCCCEEEEeccCCCCCCCcchh--------hCCHHH
Confidence 68999999975 35689999999986543 2345788999999999999999887643322 135899
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhcc------CCCCCCCc-------
Q 004839 559 FISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLL------YPILPLIA------- 625 (728)
Q Consensus 559 ~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------~~~~~~~~------- 625 (728)
+.+++++|.++..+|+++|+++|+||||.+++.++.++|+ ++++|+.+|......... .+..+...
T Consensus 225 ~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (446)
T 3hlk_A 225 FEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTK 303 (446)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEECS
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhcccccc
Confidence 9999999999988999999999999999999999999998 899999988654321000 00010000
Q ss_pred ----ccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHH-HHHHHHHHhCCCCCCCccEEEEcC
Q 004839 626 ----ADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEA-AKWVARVRESTIYDPKRPILLNLT 700 (728)
Q Consensus 626 ----~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~-~~~~~~L~~~~~~~~~~~~~~~~~ 700 (728)
.....+..+.... .......+.+ ++.|+|+++|+.|..||..+. .+++++|++++++. ..+.++++
T Consensus 304 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~-i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~--~~l~~~pg 374 (446)
T 3hlk_A 304 DGYADIVDVLNSPLEGP------DQKSFIPVER-AESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRK--PQIICYPE 374 (446)
T ss_dssp SSCEECTTCBCCTTSGG------GGGGBCCGGG-CCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCC--CEEEEETT
T ss_pred chHHHHHHHHhchhhcc------ccccccCHHH-CCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCC--cEEEEECC
Confidence 0000111221110 1112223444 789999999999999999665 79999999988541 23333899
Q ss_pred CCCCCC---------------------------chhhhHHHHHHHHHHHHHhhc
Q 004839 701 TDIVEE---------------------------NRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 701 ~gH~~~---------------------------~~~~~~~~~~~~~afl~~~l~ 727 (728)
+||.+. ....+.+.+..+.+||.++|+
T Consensus 375 agH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~ 428 (446)
T 3hlk_A 375 TGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLG 428 (446)
T ss_dssp BCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999873 122355567778999999985
No 38
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.83 E-value=1.6e-19 Score=186.05 Aligned_cols=242 Identities=13% Similarity=0.056 Sum_probs=159.9
Q ss_pred ceEEEEEEEC-CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHH---HHHHHHHCCeEEEEEcCCCCCC--
Q 004839 465 YSCEQYDVPS-HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRS---ELKSLLDRGWVVAFADVRGGGG-- 538 (728)
Q Consensus 465 ~~~~~~~~~s-~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~~~~l~~~Gy~v~~~d~RG~g~-- 538 (728)
...+.+.+.+ .+|..+++.++.|++...+++.|+||++||+.+.. ..|.. ..+.++++|++|+.+|.|+.|.
T Consensus 15 g~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~ 92 (280)
T 3i6y_A 15 GWHKQYSHVSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSD--ENFMQKAGAQRLAAELGIAIVAPDTSPRGEGV 92 (280)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCS--SHHHHHSCCHHHHHHHTCEEEEECSSCCSTTC
T ss_pred CcEEEEEEeccccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCCh--hHHhhcccHHHHHhhCCeEEEEeCCccccccc
Confidence 3556666655 57899999999998865567899999999986643 23333 2456667899999999886653
Q ss_pred ---------CCCccccccccC-C-CCCcHHH-HH-HHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEE
Q 004839 539 ---------GGKKWHHDGRRT-K-KLNSIKD-FI-SCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVL 605 (728)
Q Consensus 539 ---------~G~~~~~~~~~~-~-~~~~~~D-~~-~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~ 605 (728)
.|..|+...... + ....+.+ +. +.++++.++..+ ++||+|+|+|+||++++.++.++|++|+++|+
T Consensus 93 ~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~ 171 (280)
T 3i6y_A 93 ADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVSA 171 (280)
T ss_dssp CCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEE
T ss_pred CcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEEE
Confidence 122222211111 0 1112233 33 334444444333 78999999999999999999999999999999
Q ss_pred eCCcccchhhccCCCCCCCcccc-cccCCCCCHHHHHHHHccCcccccccCC--CCCeEEEEcCCCCCCCHHH-HHHHHH
Q 004839 606 EVPFLDATNTLLYPILPLIAADY-EEFGYPGDIDDFHAIRNYSPYDNIQKDV--LYPAVLVTSSFNTRFGVWE-AAKWVA 681 (728)
Q Consensus 606 ~~p~~d~~~~~~~~~~~~~~~~~-~~~g~p~~~~~~~~~~~~sP~~~i~~~~--~~P~lli~g~~D~~Vp~~~-~~~~~~ 681 (728)
.+|+++..... +....+ ..++... ..+..++|...+.+ . ..|++++||+.|..||..+ ++++++
T Consensus 172 ~s~~~~~~~~~------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 239 (280)
T 3i6y_A 172 FSPINNPVNCP------WGQKAFTAYLGKDT-----DTWREYDASLLMRA-AKQYVPALVDQGEADNFLAEQLKPEVLEA 239 (280)
T ss_dssp ESCCCCGGGSH------HHHHHHHHHHCSCG-----GGTGGGCHHHHHHH-CSSCCCEEEEEETTCTTHHHHTCHHHHHH
T ss_pred eCCccccccCc------hHHHHHHHhcCCch-----HHHHhcCHHHHHHh-cCCCccEEEEEeCCCccccchhhHHHHHH
Confidence 99988764311 000000 0122211 12345677766665 3 3799999999999998765 899999
Q ss_pred HHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 682 RVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 682 ~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
+|++.+++ ..+.++++++|.+.... ......++|+.++|.
T Consensus 240 ~l~~~g~~---~~~~~~~g~~H~~~~~~---~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 240 AASSNNYP---LELRSHEGYDHSYYFIA---SFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHHTTCC---EEEEEETTCCSSHHHHH---HHHHHHHHHHHHHHT
T ss_pred HHHHcCCC---ceEEEeCCCCccHHHHH---HhHHHHHHHHHhhcc
Confidence 99998853 22233899999753222 234556799998885
No 39
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.83 E-value=3.4e-19 Score=186.81 Aligned_cols=238 Identities=15% Similarity=0.039 Sum_probs=166.1
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCC-CCCcCcccHHHHHHHHHC-CeEEEEEcCCCCCCC
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAY-GELLDKRWRSELKSLLDR-GWVVAFADVRGGGGG 539 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~-~~~~~~~~~~~~~~l~~~-Gy~v~~~d~RG~g~~ 539 (728)
+.....+.+.+++.|| .+++.++.|++. .++.|+||++|||. .......|......|+++ ||.|+.+|+||++++
T Consensus 43 ~~~~~~~~~~i~~~~g-~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~ 119 (310)
T 2hm7_A 43 EPVAEVREFDMDLPGR-TLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEH 119 (310)
T ss_dssp CCCSEEEEEEEEETTE-EEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTS
T ss_pred CCcceEEEEEeccCCC-eEEEEEEecCCC--CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCC
Confidence 4567889999999888 899999999763 35679999999963 222334577778888885 999999999999875
Q ss_pred CCccccccccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhCCC----ceeEEEEeCCcccc
Q 004839 540 GKKWHHDGRRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCCPD----LFRAVVLEVPFLDA 612 (728)
Q Consensus 540 G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~----~f~a~v~~~p~~d~ 612 (728)
. .....+|+.++++|+.++. .+|+++|+++|+|+||.+++.++.++|+ +++++|+.+|+.+.
T Consensus 120 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~ 188 (310)
T 2hm7_A 120 K-----------FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 188 (310)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCC
T ss_pred C-----------CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCC
Confidence 2 1236789999999999864 3688999999999999999999987776 69999999998876
Q ss_pred hhhccCCCCCCCccccccc--CCCCCHHHHHH----H---------HccCcccc--cccCCCCCeEEEEcCCCCCCCHHH
Q 004839 613 TNTLLYPILPLIAADYEEF--GYPGDIDDFHA----I---------RNYSPYDN--IQKDVLYPAVLVTSSFNTRFGVWE 675 (728)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~--g~p~~~~~~~~----~---------~~~sP~~~--i~~~~~~P~lli~g~~D~~Vp~~~ 675 (728)
...... ..+..+ +.......... + ...+|+.. +.. + .|+|+++|+.|..+ .+
T Consensus 189 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~-~-~P~lii~G~~D~~~--~~ 257 (310)
T 2hm7_A 189 DPAHPP-------ASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSG-L-PPAYIATAQYDPLR--DV 257 (310)
T ss_dssp CTTSCC-------HHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTT-C-CCEEEEEEEECTTH--HH
T ss_pred CcccCC-------cchhhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccC-C-CCEEEEEecCCCch--HH
Confidence 411000 000000 00001111100 0 12345432 222 2 39999999999876 68
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc----hhhhHHHHHHHHHHHHHhhc
Q 004839 676 AAKWVARVRESTIYDPKRPILLNLTTDIVEEN----RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 676 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~afl~~~l~ 727 (728)
+.+++++|++++++ ..+.+++++||++.. .....+......+||.++|+
T Consensus 258 ~~~~~~~l~~~g~~---~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 258 GKLYAEALNKAGVK---VEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp HHHHHHHHHHTTCC---EEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCC---EEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 99999999998853 233338899997643 12333445667899998874
No 40
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.83 E-value=4.2e-19 Score=174.18 Aligned_cols=186 Identities=12% Similarity=0.148 Sum_probs=142.3
Q ss_pred EEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCC---CCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCcc
Q 004839 467 CEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAY---GELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKW 543 (728)
Q Consensus 467 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~---~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~ 543 (728)
.+.+.+++.|| +++++++.|++ .++.|+||++||++ +......|......|+++||.|+.+|+||+|.....+
T Consensus 6 ~~~~~~~~~~g-~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~ 81 (208)
T 3trd_A 6 NEDFLIQGPVG-QLEVMITRPKG---IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRY 81 (208)
T ss_dssp SSCEEEECSSS-EEEEEEECCSS---CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCC
T ss_pred cceEEEECCCc-eEEEEEEcCCC---CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCc
Confidence 45678999999 99998887754 24679999999952 2222344566778999999999999999999764432
Q ss_pred ccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCC
Q 004839 544 HHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPL 623 (728)
Q Consensus 544 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~ 623 (728)
.......+|+.++++++.++ .+.++++++|+|+||.+++.++ ++| +++++|+.+|..+...
T Consensus 82 ------~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~~--------- 142 (208)
T 3trd_A 82 ------DNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYEG--------- 142 (208)
T ss_dssp ------CTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSGG---------
T ss_pred ------cchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccCC---------
Confidence 22334689999999999987 3458999999999999999999 667 8999999888652110
Q ss_pred CcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCC
Q 004839 624 IAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDI 703 (728)
Q Consensus 624 ~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 703 (728)
+++ +.. ++.|+|+++|..|..||+.++.++++++.... .+..++++||
T Consensus 143 ----------------------~~~---~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~------~~~~~~~~~H 190 (208)
T 3trd_A 143 ----------------------FAS---LTQ-MASPWLIVQGDQDEVVPFEQVKAFVNQISSPV------EFVVMSGASH 190 (208)
T ss_dssp ----------------------GTT---CCS-CCSCEEEEEETTCSSSCHHHHHHHHHHSSSCC------EEEEETTCCS
T ss_pred ----------------------chh---hhh-cCCCEEEEECCCCCCCCHHHHHHHHHHccCce------EEEEeCCCCC
Confidence 012 222 57899999999999999999999998887532 2333789999
Q ss_pred CCCc
Q 004839 704 VEEN 707 (728)
Q Consensus 704 ~~~~ 707 (728)
....
T Consensus 191 ~~~~ 194 (208)
T 3trd_A 191 FFHG 194 (208)
T ss_dssp SCTT
T ss_pred cccc
Confidence 8765
No 41
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.83 E-value=3.7e-19 Score=190.11 Aligned_cols=235 Identities=10% Similarity=0.007 Sum_probs=160.3
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCC--------------CCCCccEEEEEcCCCCCC---cCcccHHHHHHHH-HC
Q 004839 463 EFYSCEQYDVPSHDGISVPLTIIYSPKYK--------------KENQNPGLLHGHGAYGEL---LDKRWRSELKSLL-DR 524 (728)
Q Consensus 463 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~--------------~~~~~P~vv~~hGg~~~~---~~~~~~~~~~~l~-~~ 524 (728)
..+..+.+.+.+ +..+++.++.|++.. ..++.|+||++|||.... ....|......|+ ++
T Consensus 68 ~~v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~ 145 (351)
T 2zsh_A 68 DGVFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLC 145 (351)
T ss_dssp TTEEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHH
T ss_pred CCceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHc
Confidence 456777787776 455888889998642 246789999999964321 2223667778888 78
Q ss_pred CeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcC----CCCCC-cEEEEEeCccHHHHHHHHHhCCC-
Q 004839 525 GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKE----IVKEH-KLAGWGYSAGGLLVAAAINCCPD- 598 (728)
Q Consensus 525 Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-ri~i~G~S~GG~~~~~~~~~~p~- 598 (728)
||+|+.+|+||++++. ....++|+.++++|+.++. .+|++ ||+++|+|+||.+++.++.++|+
T Consensus 146 g~~vv~~d~rg~~~~~-----------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~ 214 (351)
T 2zsh_A 146 KCVVVSVNYRRAPENP-----------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGES 214 (351)
T ss_dssp TSEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTT
T ss_pred CCEEEEecCCCCCCCC-----------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhcc
Confidence 9999999999987642 2246899999999999865 47899 99999999999999999998888
Q ss_pred --ceeEEEEeCCcccchhhccCCCCCCCcccccccCCCC-CHHHHH-HHH------------ccCcc----cccccCCCC
Q 004839 599 --LFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPG-DIDDFH-AIR------------NYSPY----DNIQKDVLY 658 (728)
Q Consensus 599 --~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~-~~~~~~-~~~------------~~sP~----~~i~~~~~~ 658 (728)
+++++|+.+|+++...... ......+.+. .....+ .+. ..+|+ ..+.+ ++.
T Consensus 215 ~~~v~~~vl~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~ 285 (351)
T 2zsh_A 215 GIDVLGNILLNPMFGGNERTE--------SEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEG-VSF 285 (351)
T ss_dssp TCCCCEEEEESCCCCCSSCCH--------HHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTT-CCC
T ss_pred CCCeeEEEEECCccCCCcCCh--------hhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhh-CCC
Confidence 8999999999887542100 0000001110 000000 011 11232 23333 456
Q ss_pred -CeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc---hhhhHHHHHHHHHHHHH
Q 004839 659 -PAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN---RYLQCKESALETAFLIK 724 (728)
Q Consensus 659 -P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~afl~~ 724 (728)
|+|+++|+.|..++ ++.+++++|++.+++ ..+.+++++||++.. .....+......+||.+
T Consensus 286 pP~Lii~G~~D~~~~--~~~~~~~~l~~~g~~---~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 286 PKSLVVVAGLDLIRD--WQLAYAEGLKKAGQE---VKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp CEEEEEEETTSTTHH--HHHHHHHHHHHTTCC---EEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEcCCCcchH--HHHHHHHHHHHcCCC---EEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 88999999998775 788999999988743 233338999998643 23344445566788865
No 42
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.82 E-value=6.9e-20 Score=188.84 Aligned_cols=243 Identities=13% Similarity=0.086 Sum_probs=159.6
Q ss_pred ceEEEEEEEC-CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHH---HHHHHHHCCeEEEEEcCCCCCC--
Q 004839 465 YSCEQYDVPS-HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRS---ELKSLLDRGWVVAFADVRGGGG-- 538 (728)
Q Consensus 465 ~~~~~~~~~s-~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~~~~l~~~Gy~v~~~d~RG~g~-- 538 (728)
...+.+.+.+ .+|.++++.++.|++...++++|+||++||+.+.. ..|.. ..+.++++|++|+.+|.++.|.
T Consensus 13 g~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~ 90 (280)
T 3ls2_A 13 GWHKQYTHSAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTD--ENFMQKAGAFKKAAELGIAIVAPDTSPRGDNV 90 (280)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEECCSSCCSTTS
T ss_pred ceEEEEEEechhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCCh--hhhhcchhHHHHHhhCCeEEEEeCCccccccc
Confidence 3556667765 57889999999999876677899999999986543 23332 3456677899999999875552
Q ss_pred ---------CCCccccccccC--CCCCcH-HHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEe
Q 004839 539 ---------GGKKWHHDGRRT--KKLNSI-KDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLE 606 (728)
Q Consensus 539 ---------~G~~~~~~~~~~--~~~~~~-~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~ 606 (728)
.|..|+...... .+...+ +++...+..++++.+..++|++|+|+|+||++++.++.++|++|+++++.
T Consensus 91 ~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~ 170 (280)
T 3ls2_A 91 PNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAF 170 (280)
T ss_dssp CCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEE
T ss_pred ccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEe
Confidence 233333322111 011123 33333333334333334589999999999999999999999999999999
Q ss_pred CCcccchhhccCCCCCCCcccc-cccCCCCCHHHHHHHHccCcccccccCC----CCCeEEEEcCCCCCCCHHH-HHHHH
Q 004839 607 VPFLDATNTLLYPILPLIAADY-EEFGYPGDIDDFHAIRNYSPYDNIQKDV----LYPAVLVTSSFNTRFGVWE-AAKWV 680 (728)
Q Consensus 607 ~p~~d~~~~~~~~~~~~~~~~~-~~~g~p~~~~~~~~~~~~sP~~~i~~~~----~~P~lli~g~~D~~Vp~~~-~~~~~ 680 (728)
+|+++..... +..... ..+|... +.+..++|...+.+ . ..|++++||+.|..|+... +++++
T Consensus 171 s~~~~~~~~~------~~~~~~~~~~g~~~-----~~~~~~~~~~~~~~-~~~~~~~p~li~~G~~D~~v~~~~~~~~~~ 238 (280)
T 3ls2_A 171 SPIVNPINCP------WGVKAFTGYLGADK-----TTWAQYDSCKLMAK-AEQSNYLPMLVSQGDADNFLDEQLKPQNLV 238 (280)
T ss_dssp SCCSCGGGSH------HHHHHHHHHHCSCG-----GGTGGGCHHHHHHT-CCGGGCCCEEEEEETTCTTCCCCCCHHHHH
T ss_pred cCccCcccCc------chhhHHHhhcCchH-----HHHHhcCHHHHHHh-ccccCCCcEEEEEeCCCcccCCchhHHHHH
Confidence 9988764311 000000 1122211 12345566665554 3 4599999999999999844 89999
Q ss_pred HHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 681 ARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 681 ~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
++|++.+++ ..+.++++++|.+..... .....++|+.++|.
T Consensus 239 ~~l~~~g~~---~~~~~~~g~~H~~~~~~~---~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 239 AVAKQKDYP---LTLEMQTGYDHSYFFISS---FIDQHLVFHHQYLS 279 (280)
T ss_dssp HHHHHHTCC---EEEEEETTCCSSHHHHHH---HHHHHHHHHHHHHC
T ss_pred HHHHHhCCC---ceEEEeCCCCCchhhHHH---HHHHHHHHHHHHhc
Confidence 999998853 223338999997533222 34456799998874
No 43
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.82 E-value=2.5e-19 Score=188.98 Aligned_cols=234 Identities=17% Similarity=0.058 Sum_probs=157.7
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCC-CcCcccHHHHHHHHH-CCeEEEEEcCCCCCCCC
Q 004839 463 EFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGE-LLDKRWRSELKSLLD-RGWVVAFADVRGGGGGG 540 (728)
Q Consensus 463 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~l~~-~Gy~v~~~d~RG~g~~G 540 (728)
..+..+.+.+ ..|+++++.|++ .++.|+||++|||... .....+......|++ .||+|+.+|||++++..
T Consensus 55 ~~~~~~~~~~-----~~i~~~~~~p~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~ 126 (322)
T 3fak_A 55 DDIQVEQVTV-----AGCAAEWVRAPG---CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHP 126 (322)
T ss_dssp TTCEEEEEEE-----TTEEEEEEECTT---CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred CCeeEEEEee-----CCeEEEEEeCCC---CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCC
Confidence 3445555544 238888998875 2468999999997432 222345556667776 69999999999887642
Q ss_pred CccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCc----eeEEEEeCCcccchhhc
Q 004839 541 KKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDL----FRAVVLEVPFLDATNTL 616 (728)
Q Consensus 541 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~----f~a~v~~~p~~d~~~~~ 616 (728)
....++|+.++++|+.++ .+|++||+|+|+|+||++++.++.+.++. ++++|+.+|++|+....
T Consensus 127 -----------~~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~ 194 (322)
T 3fak_A 127 -----------FPAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTN 194 (322)
T ss_dssp -----------TTHHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCC
T ss_pred -----------CCcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCC
Confidence 234789999999999988 67999999999999999999998876654 99999999999875311
Q ss_pred c----CCC-CC-CCccccc----cc-CCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHh
Q 004839 617 L----YPI-LP-LIAADYE----EF-GYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRE 685 (728)
Q Consensus 617 ~----~~~-~~-~~~~~~~----~~-g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~ 685 (728)
. ... .+ +...... .+ +.... .....||+...-+ ...|+|+++|+.|.. ..++.+++++|++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~sp~~~~~~-~~pP~li~~g~~D~~--~~~~~~~~~~l~~ 266 (322)
T 3fak_A 195 DSFKTRAEADPMVAPGGINKMAARYLNGADA-----KHPYASPNFANLK-GLPPLLIHVGRDEVL--LDDSIKLDAKAKA 266 (322)
T ss_dssp THHHHTTTTCCSCCSSHHHHHHHHHHTTSCT-----TCTTTCGGGSCCT-TCCCEEEEEETTSTT--HHHHHHHHHHHHH
T ss_pred cCHHHhCccCcccCHHHHHHHHHHhcCCCCC-----CCcccCCCccccc-CCChHhEEEcCcCcc--HHHHHHHHHHHHH
Confidence 0 000 00 0000000 00 10000 0012356643322 234889999999965 5689999999999
Q ss_pred CCCCCCCccEEEEcCCCCCCCc----hhhhHHHHHHHHHHHHHhhc
Q 004839 686 STIYDPKRPILLNLTTDIVEEN----RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 686 ~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~afl~~~l~ 727 (728)
+|++ ..+.++++++|++.. .....+....+.+||.++|+
T Consensus 267 ~g~~---~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3fak_A 267 DGVK---STLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWA 309 (322)
T ss_dssp TTCC---EEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC---EEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHHHh
Confidence 9854 233338999998643 23345556778899999884
No 44
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.82 E-value=1.3e-18 Score=183.50 Aligned_cols=236 Identities=14% Similarity=0.037 Sum_probs=164.9
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCC-CCCcCcccHHHHHHHHH-CCeEEEEEcCCCCCCC
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAY-GELLDKRWRSELKSLLD-RGWVVAFADVRGGGGG 539 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~-~~~~~~~~~~~~~~l~~-~Gy~v~~~d~RG~g~~ 539 (728)
+..+..+.+.+++.+| .|++.++.|.+ .++.|+||++|||. .......|......|++ .||.|+.+|+||++++
T Consensus 60 ~~~~~~~~~~i~~~~~-~i~~~iy~P~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~ 135 (323)
T 3ain_A 60 EEVGKIEDITIPGSET-NIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPEN 135 (323)
T ss_dssp CCCSEEEEEEEECSSS-EEEEEEEECSS---CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTS
T ss_pred CCccEEEEEEecCCCC-eEEEEEEecCC---CCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCC
Confidence 4567889999999888 89999999875 35679999999964 22233557777888886 4999999999999874
Q ss_pred CCccccccccCCCCCcHHHHHHHHHHHHHcCCC--CCCcEEEEEeCccHHHHHHHHHhCCCce---eEEEEeCCcccchh
Q 004839 540 GKKWHHDGRRTKKLNSIKDFISCARFLIEKEIV--KEHKLAGWGYSAGGLLVAAAINCCPDLF---RAVVLEVPFLDATN 614 (728)
Q Consensus 540 G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~--d~~ri~i~G~S~GG~~~~~~~~~~p~~f---~a~v~~~p~~d~~~ 614 (728)
. ....++|+.++++|+.++... |++||+|+|+|+||.+++.++.++|++. +++|+.+|+++...
T Consensus 136 ~-----------~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~ 204 (323)
T 3ain_A 136 K-----------FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDL 204 (323)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCS
T ss_pred C-----------CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCC
Confidence 2 224689999999999876311 8899999999999999999998888766 89999999887542
Q ss_pred hccCCCCCCCccccccc--CCCCCHHHHHH----H---------HccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHH
Q 004839 615 TLLYPILPLIAADYEEF--GYPGDIDDFHA----I---------RNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKW 679 (728)
Q Consensus 615 ~~~~~~~~~~~~~~~~~--g~p~~~~~~~~----~---------~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~ 679 (728)
... .+.++ +.......... + ...+|+...-. .-.|+|+++|+.|..+ .++.++
T Consensus 205 ~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~-~l~P~lii~G~~D~l~--~~~~~~ 272 (323)
T 3ain_A 205 ITK---------SLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILADLN-DLPPALIITAEHDPLR--DQGEAY 272 (323)
T ss_dssp CCH---------HHHHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCT-TCCCEEEEEETTCTTH--HHHHHH
T ss_pred CCc---------cHHHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccCccc-CCCHHHEEECCCCccH--HHHHHH
Confidence 100 00000 00001111100 0 12355543111 1249999999999876 588999
Q ss_pred HHHHHhCCCCCCCccEEEEcCCCCCCCc----hhhhHHHHHHHHHHHHHhhc
Q 004839 680 VARVRESTIYDPKRPILLNLTTDIVEEN----RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 680 ~~~L~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~afl~~~l~ 727 (728)
+++|++++++ ..+..+++++|++.. .....+......+||.++|.
T Consensus 273 a~~l~~ag~~---~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 273 ANKLLQSGVQ---VTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp HHHHHHTTCC---EEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC---EEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 9999998854 233338999999654 12334455667899998874
No 45
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.82 E-value=6e-19 Score=180.10 Aligned_cols=242 Identities=18% Similarity=0.130 Sum_probs=162.8
Q ss_pred CceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCcc
Q 004839 464 FYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKW 543 (728)
Q Consensus 464 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~ 543 (728)
....+.+.+. .||.+|.++++.|.+ .+.|+||++||..+......|......|+++||.|+.+|+||+|......
T Consensus 19 ~~~~~~~~~~-~~g~~l~~~~~~p~~----~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 93 (270)
T 3pfb_A 19 FQGMATITLE-RDGLQLVGTREEPFG----EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKF 93 (270)
T ss_dssp CCEEEEEEEE-ETTEEEEEEEEECSS----SSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCG
T ss_pred eccceEEEec-cCCEEEEEEEEcCCC----CCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCC
Confidence 3355566555 589999999888763 34799999999876543445677788999999999999999999764432
Q ss_pred ccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCC--
Q 004839 544 HHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPIL-- 621 (728)
Q Consensus 544 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~-- 621 (728)
... .-....+|+.++++++.++.. .++++++|+|+||++++.++.++|++++++|+.+|..+..........
T Consensus 94 ~~~----~~~~~~~d~~~~i~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~ 167 (270)
T 3pfb_A 94 ENM----TVLNEIEDANAILNYVKTDPH--VRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQG 167 (270)
T ss_dssp GGC----CHHHHHHHHHHHHHHHHTCTT--EEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETT
T ss_pred Ccc----CHHHHHHhHHHHHHHHHhCcC--CCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhc
Confidence 211 111246788888888876533 359999999999999999999999999999999998875532111000
Q ss_pred ----CCCccccccc-CCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEE
Q 004839 622 ----PLIAADYEEF-GYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPIL 696 (728)
Q Consensus 622 ----~~~~~~~~~~-g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~ 696 (728)
+........+ ...........+...++...+.+ ++.|+|+++|..|..||+..+.++++++.. ..+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-------~~~~ 239 (270)
T 3pfb_A 168 VTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQ-FTKPVCLIHGTDDTVVSPNASKKYDQIYQN-------STLH 239 (270)
T ss_dssp EECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTT-CCSCEEEEEETTCSSSCTHHHHHHHHHCSS-------EEEE
T ss_pred cccCcccccccccccccccchhHhhcccccCHHHHHhh-CCccEEEEEcCCCCCCCHHHHHHHHHhCCC-------CeEE
Confidence 0000000001 11111223344555555566665 899999999999999999999998888643 2333
Q ss_pred EEcCCCCCCCchhhhHHHHHHHHHHHHHh
Q 004839 697 LNLTTDIVEENRYLQCKESALETAFLIKM 725 (728)
Q Consensus 697 ~~~~~gH~~~~~~~~~~~~~~~~afl~~~ 725 (728)
+++++||.... ...........+||.++
T Consensus 240 ~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 240 LIEGADHCFSD-SYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp EETTCCTTCCT-HHHHHHHHHHHHHHC--
T ss_pred EcCCCCcccCc-cchHHHHHHHHHHHhhc
Confidence 37899998653 22222344456787654
No 46
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.82 E-value=1.8e-19 Score=210.07 Aligned_cols=237 Identities=13% Similarity=0.035 Sum_probs=163.9
Q ss_pred ECCCCcE--EEEEEEEcCCCCCCCCccEEEEEcC--CCCCC---------c-----------------------------
Q 004839 473 PSHDGIS--VPLTIIYSPKYKKENQNPGLLHGHG--AYGEL---------L----------------------------- 510 (728)
Q Consensus 473 ~s~dG~~--i~~~l~~p~~~~~~~~~P~vv~~hG--g~~~~---------~----------------------------- 510 (728)
+..||.+ |.+.+++|++. ++.|+||..|| +.+.. .
T Consensus 179 ~~~DG~~d~L~a~l~~P~~~---~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~ 255 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKST---EKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKEL 255 (763)
T ss_dssp TTCSSSCCEEEEEEEECCCS---SCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCCC---CcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccccc
Confidence 4689999 99999999863 68999996543 22110 0
Q ss_pred ------Cccc-----HHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHH-----------
Q 004839 511 ------DKRW-----RSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIE----------- 568 (728)
Q Consensus 511 ------~~~~-----~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~----------- 568 (728)
...| ....+.|+++||+|+.+|+||+|+++..+. ..+....+|+.++++||..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~~-----~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~ 330 (763)
T 1lns_A 256 PIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQT-----SGDYQQIYSMTAVIDWLNGRARAYTSRKKT 330 (763)
T ss_dssp CEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCC-----TTSHHHHHHHHHHHHHHTTSSCEESSTTCC
T ss_pred cccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcCC-----CCCHHHHHHHHHHHHHHhhccccccccccc
Confidence 0112 134588999999999999999998755432 1223468999999999984
Q ss_pred ----cCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCC-------CCC-Ccc-----ccccc
Q 004839 569 ----KEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPI-------LPL-IAA-----DYEEF 631 (728)
Q Consensus 569 ----~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~-------~~~-~~~-----~~~~~ 631 (728)
+++ +.+||+++|+||||++++.+|.++|+.++|+|+.+|+.|+...+.... .+. ... .+..+
T Consensus 331 ~~v~q~~-~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~ 409 (763)
T 1lns_A 331 HEIKASW-ANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRN 409 (763)
T ss_dssp CEECCTT-EEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGG
T ss_pred ccccccC-CCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhh
Confidence 233 457999999999999999999999999999999999987655332211 000 000 00000
Q ss_pred --------------------------CCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHh
Q 004839 632 --------------------------GYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRE 685 (728)
Q Consensus 632 --------------------------g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~ 685 (728)
..+. ..+.+...+|..++.+ +++|+|+|||..|..||+.++.+++++|+.
T Consensus 410 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~w~~~s~~~~l~~-I~~PvLii~G~~D~~vp~~~a~~l~~al~~ 485 (763)
T 1lns_A 410 LDGADFLKGNAEYEKRLAEMTAALDRKSGD---YNQFWHDRNYLINTDK-VKADVLIVHGLQDWNVTPEQAYNFWKALPE 485 (763)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHCTTTCC---CCHHHHTTBGGGGGGG-CCSEEEEEEETTCCSSCTHHHHHHHHHSCT
T ss_pred cCcchhhhHHHHHHHHHHHHHhhhhhccCc---hhHHhhccChhhHhhc-CCCCEEEEEECCCCCCChHHHHHHHHhhcc
Confidence 0010 0123445678888887 999999999999999999999999999987
Q ss_pred CCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 686 STIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 686 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
+++ ..++ ..++||..............+.+||.++|.
T Consensus 486 -~~~---~~l~-i~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lk 522 (763)
T 1lns_A 486 -GHA---KHAF-LHRGAHIYMNSWQSIDFSETINAYFVAKLL 522 (763)
T ss_dssp -TCC---EEEE-EESCSSCCCTTBSSCCHHHHHHHHHHHHHT
T ss_pred -CCC---eEEE-EeCCcccCccccchHHHHHHHHHHHHHHhc
Confidence 532 2233 468899853221122234567899999983
No 47
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.82 E-value=2.3e-18 Score=182.48 Aligned_cols=237 Identities=14% Similarity=0.079 Sum_probs=162.2
Q ss_pred EEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccC
Q 004839 471 DVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRT 550 (728)
Q Consensus 471 ~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~ 550 (728)
.+...||.+|.+.++.|.+ .+.|+||++||..+.. ..|......|+++||.|+.+|+||+|....... ...
T Consensus 39 ~~~~~dg~~l~~~~~~p~~----~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---~~~ 109 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPTG----TPKALIFVSHGAGEHS--GRYEELARMLMGLDLLVFAHDHVGHGQSEGERM---VVS 109 (342)
T ss_dssp EEECTTSCEEEEEEECCSS----CCSEEEEEECCTTCCG--GGGHHHHHHHHTTTEEEEEECCTTSTTSCSSTT---CCS
T ss_pred eEEccCCeEEEEEEeCCCC----CCCcEEEEECCCCccc--chHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCC---CcC
Confidence 6788999999998876653 4569999999976544 467788899999999999999999997643211 111
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhcc-------------
Q 004839 551 KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLL------------- 617 (728)
Q Consensus 551 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------------- 617 (728)
......+|+.++++++..+ .+.++|+++|+|+||++++.++.++|++++++|+.+|+.+......
T Consensus 110 ~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (342)
T 3hju_A 110 DFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNL 187 (342)
T ss_dssp CTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHHHHHHH
Confidence 1122478889999998876 4567999999999999999999999999999999999876532110
Q ss_pred -CCCCCCCcccccccCCCCCHHHHHHHHc--------------------c-CcccccccCCCCCeEEEEcCCCCCCCHHH
Q 004839 618 -YPILPLIAADYEEFGYPGDIDDFHAIRN--------------------Y-SPYDNIQKDVLYPAVLVTSSFNTRFGVWE 675 (728)
Q Consensus 618 -~~~~~~~~~~~~~~g~p~~~~~~~~~~~--------------------~-sP~~~i~~~~~~P~lli~g~~D~~Vp~~~ 675 (728)
.......... ..+- .......+.+.. . +....+.+ ++.|+|+|+|+.|..||+.+
T Consensus 188 ~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~Pvlii~G~~D~~~~~~~ 264 (342)
T 3hju_A 188 VLPNLSLGPID-SSVL-SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPK-LTVPFLLLQGSADRLCDSKG 264 (342)
T ss_dssp HCTTCBCCCCC-GGGS-CSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGG-CCSCEEEEEETTCSSSCHHH
T ss_pred hccccccCccc-cccc-ccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHh-CCcCEEEEEeCCCcccChHH
Confidence 0000000000 0000 001111111111 0 11133454 79999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-h-hhhHHHHHHHHHHHHHhh
Q 004839 676 AAKWVARVRESTIYDPKRPILLNLTTDIVEEN-R-YLQCKESALETAFLIKMM 726 (728)
Q Consensus 676 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~-~~~~~~~~~~~afl~~~l 726 (728)
+.++++.+...+ ..+.+++++||.... . ....+.+...++||.+++
T Consensus 265 ~~~~~~~~~~~~-----~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (342)
T 3hju_A 265 AYLLMELAKSQD-----KTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 312 (342)
T ss_dssp HHHHHHHCCCSS-----EEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCC-----ceEEEECCCCchhhcCChHHHHHHHHHHHHHHhccc
Confidence 999999987533 233447899998654 3 334445566789998876
No 48
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.82 E-value=7.5e-19 Score=185.39 Aligned_cols=247 Identities=17% Similarity=0.084 Sum_probs=165.6
Q ss_pred CCceEEEEEEECCCCc-EEEEEEEEcCCCCCCCCccEEEEEcCCCCC-CcCcccHHHHHHHHH-CCeEEEEEcCCCCCCC
Q 004839 463 EFYSCEQYDVPSHDGI-SVPLTIIYSPKYKKENQNPGLLHGHGAYGE-LLDKRWRSELKSLLD-RGWVVAFADVRGGGGG 539 (728)
Q Consensus 463 ~~~~~~~~~~~s~dG~-~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~l~~-~Gy~v~~~d~RG~g~~ 539 (728)
..+..+.+.+++.||. .|++.++.|++. .++.|+||++|||... .....|......|++ .||.|+.+|+||+|++
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~--~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~ 124 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT--AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPET 124 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC--CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTS
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC--CCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCC
Confidence 4678899999999997 899999999752 3567999999997521 223456667778887 5999999999999874
Q ss_pred CCccccccccCCCCCcHHHHHHHHHHHHHc---CCCCCCcEEEEEeCccHHHHHHHHHhCCC----ceeEEEEeCCcccc
Q 004839 540 GKKWHHDGRRTKKLNSIKDFISCARFLIEK---EIVKEHKLAGWGYSAGGLLVAAAINCCPD----LFRAVVLEVPFLDA 612 (728)
Q Consensus 540 G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~~p~----~f~a~v~~~p~~d~ 612 (728)
. .....+|+.++++|+.+. -.+|++||+++|+|+||++++.++.++++ .++++|+.+|+++.
T Consensus 125 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (323)
T 1lzl_A 125 T-----------FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDD 193 (323)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCT
T ss_pred C-----------CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCC
Confidence 2 123678999999999874 23688999999999999999999887665 49999999999876
Q ss_pred hhhc----cCCCCC-CCcc---c-cccc-CCCCCH-HHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHH
Q 004839 613 TNTL----LYPILP-LIAA---D-YEEF-GYPGDI-DDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVA 681 (728)
Q Consensus 613 ~~~~----~~~~~~-~~~~---~-~~~~-g~p~~~-~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~ 681 (728)
.... .....+ +... + +..+ +.+... .........+|+....-....|+|+++|+.|..+ .++.++++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~~ 271 (323)
T 1lzl_A 194 RLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPLR--DEGIEYAL 271 (323)
T ss_dssp TCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCTTH--HHHHHHHH
T ss_pred CcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccCcccCCCChhheEECCcCCch--HHHHHHHH
Confidence 4210 000000 0000 0 0000 111000 0000001124443311112368999999999876 58899999
Q ss_pred HHHhCCCCCCCccEEEEcCCCCCCCc---hhhhHHHHHHHHHHHHHhhc
Q 004839 682 RVRESTIYDPKRPILLNLTTDIVEEN---RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 682 ~L~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~afl~~~l~ 727 (728)
+|++++++ ..+.+++++||++.. .....+......+||.++|+
T Consensus 272 ~l~~~g~~---~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~ 317 (323)
T 1lzl_A 272 RLLQAGVS---VELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 317 (323)
T ss_dssp HHHHTTCC---EEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCC---EEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhc
Confidence 99998854 233338999998643 12234456667899998874
No 49
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.82 E-value=5.1e-19 Score=185.51 Aligned_cols=241 Identities=17% Similarity=0.096 Sum_probs=163.7
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCC-CCcCcccHHHHHHHHHC-CeEEEEEcCCCCCCC
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYG-ELLDKRWRSELKSLLDR-GWVVAFADVRGGGGG 539 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~-~~~~~~~~~~~~~l~~~-Gy~v~~~d~RG~g~~ 539 (728)
+.....+.+.+++.+| .|++.+++|.+. .+.|+||++||+.. ......|......|+++ ||.|+.+|+||+|++
T Consensus 43 ~~~~~~~~~~i~~~~g-~i~~~~~~p~~~---~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~ 118 (311)
T 2c7b_A 43 EPIAETRDVHIPVSGG-SIRARVYFPKKA---AGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEY 118 (311)
T ss_dssp CCCSEEEEEEEEETTE-EEEEEEEESSSC---SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTS
T ss_pred CCcceEEEEEecCCCC-cEEEEEEecCCC---CCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCC
Confidence 4566889999999888 899999998752 34799999999751 12334567777888886 999999999999875
Q ss_pred CCccccccccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhCCC----ceeEEEEeCCcccc
Q 004839 540 GKKWHHDGRRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCCPD----LFRAVVLEVPFLDA 612 (728)
Q Consensus 540 G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~----~f~a~v~~~p~~d~ 612 (728)
. .....+|+.++++|+.+.. .+|++||+++|+|+||++++.++.++|+ +++++|+.+|++++
T Consensus 119 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 187 (311)
T 2c7b_A 119 K-----------FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNM 187 (311)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCC
T ss_pred C-----------CCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCC
Confidence 2 1236789999999998752 4688999999999999999999987765 59999999999884
Q ss_pred hhh--------ccCCCCCCCcc---cc-ccc-CCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHH
Q 004839 613 TNT--------LLYPILPLIAA---DY-EEF-GYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKW 679 (728)
Q Consensus 613 ~~~--------~~~~~~~~~~~---~~-~~~-g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~ 679 (728)
... .......+... ++ ..+ +.+.... -...+|+...-..+. |+|+++|+.|..++ ++.++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~l~~~~-P~lii~G~~D~~~~--~~~~~ 260 (311)
T 2c7b_A 188 TGVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEEAY----DFKASPLLADLGGLP-PALVVTAEYDPLRD--EGELY 260 (311)
T ss_dssp SSCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTGGG----STTTCGGGSCCTTCC-CEEEEEETTCTTHH--HHHHH
T ss_pred ccccccCCccHHHhccCCCCHHHHHHHHHHhCCCCcccc----CcccCcccccccCCC-cceEEEcCCCCchH--HHHHH
Confidence 210 00000001000 00 000 1111000 012345543222133 99999999998775 67888
Q ss_pred HHHHHhCCCCCCCccEEEEcCCCCCCCc----hhhhHHHHHHHHHHHHHhhc
Q 004839 680 VARVRESTIYDPKRPILLNLTTDIVEEN----RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 680 ~~~L~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~afl~~~l~ 727 (728)
+++|+..+++ ..+..+++++|++.. .....+......+||.++|+
T Consensus 261 ~~~l~~~g~~---~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 261 AYKMKASGSR---AVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp HHHHHHTTCC---EEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCCC---EEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 9999988753 233338999998753 23334455667899998874
No 50
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.82 E-value=1.6e-19 Score=186.06 Aligned_cols=242 Identities=13% Similarity=0.087 Sum_probs=153.5
Q ss_pred eEEEEEEE-CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHH---HHHHHHCCeEEEEEcC--CCCCCC
Q 004839 466 SCEQYDVP-SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSE---LKSLLDRGWVVAFADV--RGGGGG 539 (728)
Q Consensus 466 ~~~~~~~~-s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~---~~~l~~~Gy~v~~~d~--RG~g~~ 539 (728)
..+.+.+. ..+|..+++.++.|++.. .++.|+||++||+.+.. ..|... .+.++++||+|+.+|+ ||+|+.
T Consensus 15 ~~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~ 91 (282)
T 3fcx_A 15 LQKVFEHDSVELNCKMKFAVYLPPKAE-TGKCPALYWLSGLTCTE--QNFISKSGYHQSASEHGLVVIAPDTSPRGCNIK 91 (282)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC-
T ss_pred cEEEEEEEchhcCCeeEEEEEcCCCCC-CCCCCEEEEEcCCCCCc--cchhhcchHHHHhhcCCeEEEEeccccCccccc
Confidence 34455554 457889999999998753 36799999999986644 334333 4778889999999999 888865
Q ss_pred CCc----------cccccccCC---CCCcHHHHH-HHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEE
Q 004839 540 GKK----------WHHDGRRTK---KLNSIKDFI-SCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVL 605 (728)
Q Consensus 540 G~~----------~~~~~~~~~---~~~~~~D~~-~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~ 605 (728)
|.. |+....... ......++. +.++++.++--+|++||+|+|+|+||++++.++.++|++|+++|+
T Consensus 92 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~ 171 (282)
T 3fcx_A 92 GEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSA 171 (282)
T ss_dssp -------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEE
T ss_pred cccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEE
Confidence 433 222111100 001233344 333444434447999999999999999999999999999999999
Q ss_pred eCCcccchhhccCCCCCCCcccc-cccCCCCCHHHHHHHHccCccccccc--CCCCCeEEEEcCCCCCCCHHH--HHHHH
Q 004839 606 EVPFLDATNTLLYPILPLIAADY-EEFGYPGDIDDFHAIRNYSPYDNIQK--DVLYPAVLVTSSFNTRFGVWE--AAKWV 680 (728)
Q Consensus 606 ~~p~~d~~~~~~~~~~~~~~~~~-~~~g~p~~~~~~~~~~~~sP~~~i~~--~~~~P~lli~g~~D~~Vp~~~--~~~~~ 680 (728)
.+|+.+..... +....+ ..++... ..+..++|...+.. .+..|+|++||+.|..||..+ +++++
T Consensus 172 ~s~~~~~~~~~------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~ 240 (282)
T 3fcx_A 172 FAPICNPVLCP------WGKKAFSGYLGTDQ-----SKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240 (282)
T ss_dssp ESCCCCGGGSH------HHHHHHHHHHC--------CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHH
T ss_pred eCCccCcccCc------hhHHHHHHhcCCch-----hhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHH
Confidence 99988754310 000000 0112211 11234455443332 147899999999998886655 66999
Q ss_pred HHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 681 ARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 681 ~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
++|++++++ ..+.+++++||.+..... .....+.|+.++|.
T Consensus 241 ~~l~~~g~~---~~~~~~~g~~H~~~~~~~---~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 241 AACTEKKIP---VVFRLQEDYDHSYYFIAT---FITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHTTCC---EEEEEETTCCSSHHHHHH---HHHHHHHHHHHHTT
T ss_pred HHHHHcCCc---eEEEECCCCCcCHHHHHh---hhHHHHHHHHHhhc
Confidence 999998853 222238999998643222 23445788888774
No 51
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.81 E-value=4.6e-19 Score=186.08 Aligned_cols=237 Identities=17% Similarity=0.069 Sum_probs=164.6
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCC-CCCcCcccHHHHHHHHHC-CeEEEEEcCCCCCCC
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAY-GELLDKRWRSELKSLLDR-GWVVAFADVRGGGGG 539 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~-~~~~~~~~~~~~~~l~~~-Gy~v~~~d~RG~g~~ 539 (728)
+.....+.+.+++.+| .|+++++.|++. ++.|+||++|||. .......|......|+++ ||.|+.+|+||+|++
T Consensus 46 ~~~~~~~~~~i~~~~g-~~~~~~~~P~~~---~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~ 121 (313)
T 2wir_A 46 EPIHRVEDITIPGRGG-PIRARVYRPRDG---ERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEH 121 (313)
T ss_dssp CCCSEEEEEEEEETTE-EEEEEEEECSCC---SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHCCEEEEEECCCTTTS
T ss_pred CCCceEEEEEeeCCCC-cEEEEEEecCCC---CCccEEEEECCCcccCCChHHHHHHHHHHHHHcCCEEEEeecCCCCCC
Confidence 3456788999999888 899999998752 4579999999974 222335677778888884 999999999999875
Q ss_pred CCccccccccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhCCCc----eeEEEEeCCcccc
Q 004839 540 GKKWHHDGRRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCCPDL----FRAVVLEVPFLDA 612 (728)
Q Consensus 540 G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~~----f~a~v~~~p~~d~ 612 (728)
. .....+|+.++++|+.+.. .+|+++|+++|+|+||.+++.++.++|++ ++++|+.+|++|+
T Consensus 122 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 190 (313)
T 2wir_A 122 K-----------FPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYPAVNL 190 (313)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCC
T ss_pred C-----------CCchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEEEEcCccCC
Confidence 2 1236789999999998752 36788999999999999999999887776 9999999999883
Q ss_pred hhhccCCCCCCCccccccc----CCCCCHHHHHH----H---------HccCcccccccCCCCCeEEEEcCCCCCCCHHH
Q 004839 613 TNTLLYPILPLIAADYEEF----GYPGDIDDFHA----I---------RNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWE 675 (728)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~----g~p~~~~~~~~----~---------~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~ 675 (728)
..... + .+..+ +.......... + ...+|+...-+ ...|+|+++|+.|..+ .+
T Consensus 191 ~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~-~~~P~lii~G~~D~~~--~~ 259 (313)
T 2wir_A 191 TGSPT----V----SRVEYSGPEYVILTADLMAWFGRQYFSKPQDALSPYASPIFADLS-NLPPALVITAEYDPLR--DE 259 (313)
T ss_dssp SSCCC----H----HHHHTCSGGGCSSCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCCT-TCCCEEEEEEEECTTH--HH
T ss_pred CCCCC----c----CHHHhcccCCCccCHHHHHHHHHHhCCCCCccCCCccCcCccccc-CCCcceEEEcCcCcCh--HH
Confidence 22100 0 00000 00001111110 0 11356522212 2349999999999876 47
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc----hhhhHHHHHHHHHHHHHhhc
Q 004839 676 AAKWVARVRESTIYDPKRPILLNLTTDIVEEN----RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 676 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~afl~~~l~ 727 (728)
+.+++++|++++++ ..+.++++++|++.. .....+......+||.+++.
T Consensus 260 ~~~~~~~l~~~g~~---~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 260 GELYAHLLKTRGVR---AVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp HHHHHHHHHHTTCC---EEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHCCCC---EEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 89999999998853 233338999998753 13334455667899988764
No 52
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.81 E-value=9.6e-19 Score=179.96 Aligned_cols=243 Identities=9% Similarity=0.031 Sum_probs=159.3
Q ss_pred ceEEEEEEE-CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHH---HHHHHHHCCeEEEEEcCCCCCCCC
Q 004839 465 YSCEQYDVP-SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRS---ELKSLLDRGWVVAFADVRGGGGGG 540 (728)
Q Consensus 465 ~~~~~~~~~-s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~~~~l~~~Gy~v~~~d~RG~g~~G 540 (728)
...+.+.+. ..+|..+++.++.|++.. +++.|+||++||+.+.. ..|.. ..+.+.++||+|+.+|+||+|...
T Consensus 13 g~~~~~~~~s~~~g~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~ 89 (278)
T 3e4d_A 13 GMQGVFSHQSETLKSEMTFAVYVPPKAI-HEPCPVVWYLSGLTCTH--ANVMEKGEYRRMASELGLVVVCPDTSPRGNDV 89 (278)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEECCSSCCSTTS
T ss_pred CcEEEEEEeccccCCcceEEEEcCCCCC-CCCCCEEEEEcCCCCCc--cchhhcccHHHHHhhCCeEEEecCCcccCccc
Confidence 345566664 457889999999998753 56789999999986644 33433 234555579999999999988542
Q ss_pred Cc------------cccccccC--CCCCcHHHHH--HHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEE
Q 004839 541 KK------------WHHDGRRT--KKLNSIKDFI--SCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVV 604 (728)
Q Consensus 541 ~~------------~~~~~~~~--~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v 604 (728)
.. |+...... .....+.+.+ +.++++.+...+|++||+++|+|+||++++.++.++|++|+++|
T Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 169 (278)
T 3e4d_A 90 PDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCS 169 (278)
T ss_dssp CCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEE
T ss_pred ccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEE
Confidence 21 12111110 1112334433 35666666656788999999999999999999999999999999
Q ss_pred EeCCcccchhhccCCCCCCCcccc-cccCCCCCHHHHHHHHccCcccccccC-CCCCeEEEEcCCCCCCCHHH-HHHHHH
Q 004839 605 LEVPFLDATNTLLYPILPLIAADY-EEFGYPGDIDDFHAIRNYSPYDNIQKD-VLYPAVLVTSSFNTRFGVWE-AAKWVA 681 (728)
Q Consensus 605 ~~~p~~d~~~~~~~~~~~~~~~~~-~~~g~p~~~~~~~~~~~~sP~~~i~~~-~~~P~lli~g~~D~~Vp~~~-~~~~~~ 681 (728)
+.+|+++.... ++....+ ..+|... ..+..++|...+.+. ...|++++||+.|..||... +.++++
T Consensus 170 ~~~~~~~~~~~------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~ 238 (278)
T 3e4d_A 170 AFAPIVAPSSA------DWSEPALEKYLGADR-----AAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEE 238 (278)
T ss_dssp EESCCSCGGGC------TTTHHHHHHHHCSCG-----GGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHH
T ss_pred EeCCcccccCC------ccchhhHHHhcCCcH-----HHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHH
Confidence 99998876431 1111111 1123211 123355666555431 23489999999999888533 799999
Q ss_pred HHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 682 RVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 682 ~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
+|++.+++ ..+.++++++|.+..... .....++|+.++|+
T Consensus 239 ~l~~~g~~---~~~~~~~g~~H~~~~~~~---~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 239 AIKGTDIG---LTLRMHDRYDHSYYFIST---FMDDHLKWHAERLG 278 (278)
T ss_dssp HHTTSSCE---EEEEEETTCCSSHHHHHH---HHHHHHHHHHHHHC
T ss_pred HHHHcCCC---ceEEEeCCCCcCHHHHHH---HHHHHHHHHHHhcC
Confidence 99998843 122228899997533222 34456789998875
No 53
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.81 E-value=1.3e-18 Score=186.71 Aligned_cols=246 Identities=16% Similarity=0.132 Sum_probs=163.8
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCC---CCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCC
Q 004839 463 EFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAY---GELLDKRWRSELKSLLDRGWVVAFADVRGGGGG 539 (728)
Q Consensus 463 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~---~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~ 539 (728)
..+..+.+.+.+.+|..+.+.++.|.+. .++.|+||++|||. +......|......|+++||+|+.+|+||+|++
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~v~~p~~~--~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~ 155 (361)
T 1jkm_A 78 DDVETSTETILGVDGNEITLHVFRPAGV--EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTA 155 (361)
T ss_dssp CCEEEEEEEEECTTSCEEEEEEEEETTC--CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEET
T ss_pred CCceeeeeeeecCCCCeEEEEEEeCCCC--CCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCC
Confidence 4567788889999998999999999763 23689999999975 322212566677889999999999999999754
Q ss_pred CCccccccccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHh-----CCCceeEEEEeCCccc
Q 004839 540 GKKWHHDGRRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINC-----CPDLFRAVVLEVPFLD 611 (728)
Q Consensus 540 G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~-----~p~~f~a~v~~~p~~d 611 (728)
.. .......+.|+.++++|+.++. ..| +|+++|+|+||.+++.++.+ +|++++++|+.+|+++
T Consensus 156 ~~-------~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~ 226 (361)
T 1jkm_A 156 EG-------HHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYIS 226 (361)
T ss_dssp TE-------ECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCC
T ss_pred CC-------CCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccc
Confidence 21 1123346899999999998752 234 99999999999999999987 7889999999999988
Q ss_pred chhhccCCCCCCCccccccc-CCCCCHHHHHH----H---------HccCcc----cccccCCCCCeEEEEcCCCCCCCH
Q 004839 612 ATNTLLYPILPLIAADYEEF-GYPGDIDDFHA----I---------RNYSPY----DNIQKDVLYPAVLVTSSFNTRFGV 673 (728)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~-g~p~~~~~~~~----~---------~~~sP~----~~i~~~~~~P~lli~g~~D~~Vp~ 673 (728)
....+...........+.++ +.......... + ...+|+ ..+.+ +. |+|+++|+.|..++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~-l~-P~Lii~G~~D~~~~- 303 (361)
T 1jkm_A 227 GGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRG-LP-PFVVAVNELDPLRD- 303 (361)
T ss_dssp CCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTT-CC-CEEEEEETTCTTHH-
T ss_pred cccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcC-CC-ceEEEEcCcCcchh-
Confidence 72100000000000000000 00001111100 0 123444 12333 55 99999999998887
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCC-c-h---hhh-HHHHHHHHHHHHHhh
Q 004839 674 WEAAKWVARVRESTIYDPKRPILLNLTTDIVEE-N-R---YLQ-CKESALETAFLIKMM 726 (728)
Q Consensus 674 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~-~-~---~~~-~~~~~~~~afl~~~l 726 (728)
++.+++++|++.+++ ..+.+++++||++. . . ... .+......+||.++.
T Consensus 304 -~~~~~~~~l~~~g~~---~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 304 -EGIAFARRLARAGVD---VAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp -HHHHHHHHHHHTTCC---EEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHcCCC---EEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 899999999998753 23333899999875 2 1 222 344566789998764
No 54
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.81 E-value=2.1e-18 Score=170.54 Aligned_cols=207 Identities=11% Similarity=0.088 Sum_probs=153.8
Q ss_pred ceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCC---CCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCC
Q 004839 465 YSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAY---GELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGK 541 (728)
Q Consensus 465 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~---~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~ 541 (728)
...+.+.+++.|| .+.++++.|++.. .++.|+||++||+. +......|......|+++||.|+.+|+||+|....
T Consensus 8 ~~~~~~~~~~~~g-~~~~~~~~p~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 85 (220)
T 2fuk_A 8 TESAALTLDGPVG-PLDVAVDLPEPDV-AVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAG 85 (220)
T ss_dssp SSCEEEEEEETTE-EEEEEEECCCTTS-CCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCS
T ss_pred ccceEEEEeCCCC-eEEEEEEeCCCCC-ccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCC
Confidence 3457888999999 8999998886521 13479999999953 22222345667788999999999999999997654
Q ss_pred ccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCC
Q 004839 542 KWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPIL 621 (728)
Q Consensus 542 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~ 621 (728)
.+ .......+|+.++++++.++. +.++++++|+|+||.+++.++.++ +++++|+.+|..+...
T Consensus 86 ~~------~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~------- 148 (220)
T 2fuk_A 86 SF------DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD------- 148 (220)
T ss_dssp CC------CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC-------
T ss_pred Cc------ccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh-------
Confidence 43 122346899999999999874 667999999999999999999876 8999999998765421
Q ss_pred CCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCC
Q 004839 622 PLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTT 701 (728)
Q Consensus 622 ~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 701 (728)
+. .+. ...|+|+++|..|..||+.++.+++++++. . ..+..++++
T Consensus 149 ------------------------~~---~~~--~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~ 193 (220)
T 2fuk_A 149 ------------------------FS---DVQ--PPAQWLVIQGDADEIVDPQAVYDWLETLEQ-Q-----PTLVRMPDT 193 (220)
T ss_dssp ------------------------CT---TCC--CCSSEEEEEETTCSSSCHHHHHHHHTTCSS-C-----CEEEEETTC
T ss_pred ------------------------hh---hcc--cCCcEEEEECCCCcccCHHHHHHHHHHhCc-C-----CcEEEeCCC
Confidence 01 111 256899999999999999999999988852 1 233337899
Q ss_pred CCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 702 DIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 702 gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
||....... +......+||.++|.
T Consensus 194 ~H~~~~~~~--~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 194 SHFFHRKLI--DLRGALQHGVRRWLP 217 (220)
T ss_dssp CTTCTTCHH--HHHHHHHHHHGGGCS
T ss_pred CceehhhHH--HHHHHHHHHHHHHhh
Confidence 998755322 234446788888763
No 55
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.80 E-value=7e-18 Score=174.20 Aligned_cols=238 Identities=13% Similarity=0.077 Sum_probs=160.6
Q ss_pred EEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccC
Q 004839 471 DVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRT 550 (728)
Q Consensus 471 ~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~ 550 (728)
.+...||.+|.+.++.|.+ ++.|+||++||..+.. ..|......|+++||.|+.+|+||+|....... ...
T Consensus 21 ~~~~~~g~~l~~~~~~~~~----~~~~~vv~~hG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---~~~ 91 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG----TPKALIFVSHGAGEHS--GRYEELARMLMGLDLLVFAHDHVGHGQSEGERM---VVS 91 (303)
T ss_dssp EEECTTSCEEEEEEECCSS----CCSEEEEEECCTTCCG--GGGHHHHHHHHHTTEEEEEECCTTSTTSCSSTT---CCS
T ss_pred eEecCCCeEEEEEEeccCC----CCCeEEEEECCCCchh--hHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCC---CCC
Confidence 5788899999998876653 4569999999976543 467788899999999999999999997643211 111
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc--------------
Q 004839 551 KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL-------------- 616 (728)
Q Consensus 551 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~-------------- 616 (728)
.-....+|+.+.++++..+ .+.+++.++|+|+||.+++.++.++|++++++|+.+|........
T Consensus 92 ~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (303)
T 3pe6_A 92 DFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNS 169 (303)
T ss_dssp STHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHHH
Confidence 1122467888888888765 245799999999999999999999999999999999987653210
Q ss_pred cCCCCCCCcccccccCCCCCHHHHHHHHc--------------------cC-cccccccCCCCCeEEEEcCCCCCCCHHH
Q 004839 617 LYPILPLIAADYEEFGYPGDIDDFHAIRN--------------------YS-PYDNIQKDVLYPAVLVTSSFNTRFGVWE 675 (728)
Q Consensus 617 ~~~~~~~~~~~~~~~g~p~~~~~~~~~~~--------------------~s-P~~~i~~~~~~P~lli~g~~D~~Vp~~~ 675 (728)
........... ..+. .........+.. .. ....+.+ ++.|+|+|+|+.|..||+.+
T Consensus 170 ~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~l~i~g~~D~~~~~~~ 246 (303)
T 3pe6_A 170 VLPNLSSGPID-SSVL-SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPK-LTVPFLLLQGSADRLCDSKG 246 (303)
T ss_dssp TCCSCCCCCCC-GGGT-CSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGG-CCSCEEEEEETTCSSBCHHH
T ss_pred hcccccCCccc-hhhh-hcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhc-CCCCEEEEeeCCCCCCChHH
Confidence 00000000000 0000 001111111111 00 1123444 79999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-h-hhhHHHHHHHHHHHHHhhc
Q 004839 676 AAKWVARVRESTIYDPKRPILLNLTTDIVEEN-R-YLQCKESALETAFLIKMME 727 (728)
Q Consensus 676 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~-~~~~~~~~~~~afl~~~l~ 727 (728)
+.++++.+...+ ..+.+++++||.... . ....+.....++||.+++.
T Consensus 247 ~~~~~~~~~~~~-----~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~ 295 (303)
T 3pe6_A 247 AYLLMELAKSQD-----KTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTA 295 (303)
T ss_dssp HHHHHHHCCCSS-----EEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcccCC-----ceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCC
Confidence 999999886433 233347899998654 3 3344455667899998763
No 56
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.80 E-value=1e-18 Score=190.47 Aligned_cols=242 Identities=13% Similarity=0.094 Sum_probs=161.4
Q ss_pred ceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHH-HHHHHHCCeEEEEEcCCCCCCCCCcc
Q 004839 465 YSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSE-LKSLLDRGWVVAFADVRGGGGGGKKW 543 (728)
Q Consensus 465 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~-~~~l~~~Gy~v~~~d~RG~g~~G~~~ 543 (728)
...+.+.++. +|..++++++ |.+ +++.|+||++||..+.. ..|... ...++++||.|+.+|+||+|.+...
T Consensus 133 ~~~~~~~i~~-~~~~l~~~~~-~~~---~~~~p~vv~~HG~~~~~--~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~- 204 (405)
T 3fnb_A 133 IPLKSIEVPF-EGELLPGYAI-ISE---DKAQDTLIVVGGGDTSR--EDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQ- 204 (405)
T ss_dssp CCCEEEEEEE-TTEEEEEEEE-CCS---SSCCCEEEEECCSSCCH--HHHHHHTHHHHHHTTCEEEEECCTTSTTGGGG-
T ss_pred CCcEEEEEeE-CCeEEEEEEE-cCC---CCCCCEEEEECCCCCCH--HHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCC-
Confidence 3456777776 6889999776 432 24459999999975432 233222 3467789999999999999976321
Q ss_pred ccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccC---C-
Q 004839 544 HHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLY---P- 619 (728)
Q Consensus 544 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~---~- 619 (728)
.........+|+.+++++|..++ ++|+++|+|+||++++.++.++| +++++|+.+|+.++...... .
T Consensus 205 ----~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~ 275 (405)
T 3fnb_A 205 ----GLHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTA 275 (405)
T ss_dssp ----TCCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC--
T ss_pred ----CCCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhh
Confidence 11122345788999999987654 78999999999999999999888 89999999999987653210 0
Q ss_pred -CCCCC-cccc-------------------cccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHH
Q 004839 620 -ILPLI-AADY-------------------EEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAK 678 (728)
Q Consensus 620 -~~~~~-~~~~-------------------~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~ 678 (728)
..+.. .... ..++........+.+..+++...+.+ +++|+|+|+|+.|..||+.++.+
T Consensus 276 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~PvLii~G~~D~~v~~~~~~~ 354 (405)
T 3fnb_A 276 LKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNK-IDVPSLFLVGAGEDSELMRQSQV 354 (405)
T ss_dssp ----------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGG-CCSCEEEEEETTSCHHHHHHHHH
T ss_pred hhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhh-CCCCEEEEecCCCcCCChHHHHH
Confidence 00000 0000 00111111122334445555555665 89999999999999999999999
Q ss_pred HHHHHHhCCCCCCCccEEEEcCCCCCCCc--hhhhHHHHHHHHHHHHHhhc
Q 004839 679 WVARVRESTIYDPKRPILLNLTTDIVEEN--RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 679 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~afl~~~l~ 727 (728)
++++|+..+.+ ..+.+++++.|++.. ..........+.+||.++|+
T Consensus 355 l~~~l~~~~~~---~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~ 402 (405)
T 3fnb_A 355 LYDNFKQRGID---VTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFK 402 (405)
T ss_dssp HHHHHHHTTCC---EEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC
T ss_pred HHHHhccCCCC---ceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhC
Confidence 99999987643 233336665554322 23333345567899999885
No 57
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.80 E-value=7e-19 Score=197.39 Aligned_cols=240 Identities=11% Similarity=0.066 Sum_probs=168.2
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCccc----------------------HHHHHH
Q 004839 463 EFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRW----------------------RSELKS 520 (728)
Q Consensus 463 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~----------------------~~~~~~ 520 (728)
..+..+.+.++.+||.+|.+.++.|++ .++.|+||..|| |+....+.+ ....+.
T Consensus 37 ~~~~~~~v~i~~~DG~~L~a~l~~P~~---~~~~P~vl~~~p-yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 112 (560)
T 3iii_A 37 EMIMEKDGTVEMRDGEKLYINIFRPNK---DGKFPVVMSADT-YGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGF 112 (560)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEECSS---SSCEEEEEEEES-SCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHH
T ss_pred ceEEEEEEEEECCCCcEEEEEEEecCC---CCCCCEEEEecC-CCCCcccccccccccccccccccccccccccCCCHHH
Confidence 355678899999999999999999986 367999999886 333221111 123689
Q ss_pred HHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCce
Q 004839 521 LLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLF 600 (728)
Q Consensus 521 l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f 600 (728)
|+++||+|+.+|+||+|+++..|.. .+....+|+.++++||.+++++| +||+++|+||||++++.+++++|+.+
T Consensus 113 la~~Gy~vv~~D~RG~G~S~G~~~~-----~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l 186 (560)
T 3iii_A 113 WVPNDYVVVKVALRGSDKSKGVLSP-----WSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHL 186 (560)
T ss_dssp HGGGTCEEEEEECTTSTTCCSCBCT-----TSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTE
T ss_pred HHhCCCEEEEEcCCCCCCCCCcccc-----CChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCce
Confidence 9999999999999999998877652 23457899999999999999888 89999999999999999999899999
Q ss_pred eEEEEeCCcccchhhccC-CCCC-CC--ccccc----cc--------------CCCCCHHHHHHHHccCcccccccCCCC
Q 004839 601 RAVVLEVPFLDATNTLLY-PILP-LI--AADYE----EF--------------GYPGDIDDFHAIRNYSPYDNIQKDVLY 658 (728)
Q Consensus 601 ~a~v~~~p~~d~~~~~~~-~~~~-~~--~~~~~----~~--------------g~p~~~~~~~~~~~~sP~~~i~~~~~~ 658 (728)
+|+|+.+|+.|+...... ...+ .. ..|+. .| ..|.. -+++.+.++ ++.+ ++.
T Consensus 187 ~aiv~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~---d~~W~~~~~--~~~~-I~v 260 (560)
T 3iii_A 187 KAMIPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLF---DDFWKQRQV--PLSQ-IKT 260 (560)
T ss_dssp EEEEEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSS---CHHHHTTBC--CGGG-CCS
T ss_pred EEEEecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCc---chHhhccCC--chhh-CCC
Confidence 999999999997642111 1111 00 00110 00 11111 023445555 4565 999
Q ss_pred CeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 004839 659 PAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMM 726 (728)
Q Consensus 659 P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l 726 (728)
|+|++.|-.|..+...++.+.+++|+..+ +-+.+ .+.+|.. ..-..+.....++||+++|
T Consensus 261 Pvl~v~Gw~D~~~~~~g~l~~y~~l~~~~-----k~l~i-h~~~~~~--~~~~~~~~~~~~~wfD~~L 320 (560)
T 3iii_A 261 PLLTCASWSTQGLHNRGSFEGFKQAASEE-----KWLYV-HGRKEWE--SYYARENLERQKSFFDFYL 320 (560)
T ss_dssp CEEEEEEGGGTTTTHHHHHHHHHHCCCSS-----EEEEE-ESSCHHH--HHHSHHHHHHHHHHHHHHT
T ss_pred CEEEeCCcCCCcccchhHHHHHHhccccC-----cEEEE-CCCCCcC--cccChhHHHHHHHHHHHHh
Confidence 99999999997677888888898887644 22222 2233321 1111233456789999998
No 58
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.80 E-value=5.8e-19 Score=182.40 Aligned_cols=216 Identities=19% Similarity=0.175 Sum_probs=137.9
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCC
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 573 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 573 (728)
+..+.||++||..++. ..|...++.|+++||.|+.+|+||+|.+........ .....+|+.+++++|.+.
T Consensus 49 G~~~~VlllHG~~~s~--~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~----~~~~~~d~~~~~~~l~~~---- 118 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSP--QSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAAST----ASDWTADIVAAMRWLEER---- 118 (281)
T ss_dssp CSSEEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCC----HHHHHHHHHHHHHHHHHH----
T ss_pred CCCceEEEECCCCCCH--HHHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCC----HHHHHHHHHHHHHHHHhC----
Confidence 3446688999965543 457888899999999999999999997632211110 011246677777777643
Q ss_pred CCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc-----cCCCCCCC---------cccccccCCCCCH-H
Q 004839 574 EHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL-----LYPILPLI---------AADYEEFGYPGDI-D 638 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~-----~~~~~~~~---------~~~~~~~g~p~~~-~ 638 (728)
.++++++|+||||.+++.++.++|++++++|+.+|...+.... .....+.. .....+...+..+ .
T Consensus 119 ~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (281)
T 4fbl_A 119 CDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPVP 198 (281)
T ss_dssp CSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEGG
T ss_pred CCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCchH
Confidence 3689999999999999999999999999999999987654310 00111100 0000111111100 0
Q ss_pred HHHHHHccC--cccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHH
Q 004839 639 DFHAIRNYS--PYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESA 716 (728)
Q Consensus 639 ~~~~~~~~s--P~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 716 (728)
....+.... .-..+.+ +++|+|+|+|+.|..||+.++.++++++.... ..+.+++++||......+.-....
T Consensus 199 ~~~~~~~~~~~~~~~l~~-i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~-----~~l~~~~~~gH~~~~e~~~e~v~~ 272 (281)
T 4fbl_A 199 AIKHLITIGAVAEMLLPR-VKCPALIIQSREDHVVPPHNGELIYNGIGSTE-----KELLWLENSYHVATLDNDKELILE 272 (281)
T ss_dssp GHHHHHHHHHHHHHHGGG-CCSCEEEEEESSCSSSCTHHHHHHHHHCCCSS-----EEEEEESSCCSCGGGSTTHHHHHH
T ss_pred HHHHHHHhhhhccccccc-cCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCC-----cEEEEECCCCCcCccccCHHHHHH
Confidence 011111100 0123444 89999999999999999999999999886543 234447999997543211222345
Q ss_pred HHHHHHHHh
Q 004839 717 LETAFLIKM 725 (728)
Q Consensus 717 ~~~afl~~~ 725 (728)
.+.+||.+|
T Consensus 273 ~i~~FL~~H 281 (281)
T 4fbl_A 273 RSLAFIRKH 281 (281)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhC
Confidence 578999876
No 59
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.80 E-value=2.9e-18 Score=180.82 Aligned_cols=233 Identities=14% Similarity=0.038 Sum_probs=155.1
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCC-CCcCcccHHHHHHHHHC-CeEEEEEcCCCCCCC
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYG-ELLDKRWRSELKSLLDR-GWVVAFADVRGGGGG 539 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~-~~~~~~~~~~~~~l~~~-Gy~v~~~d~RG~g~~ 539 (728)
+..+..+.+.+ +|..+ ++|++. ....|+||++|||.. ......|......|+++ ||+|+.+|||++++.
T Consensus 55 ~~~~~~~~~~~---~g~~~----~~p~~~--~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~ 125 (322)
T 3k6k_A 55 AEGVELTLTDL---GGVPC----IRQATD--GAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPEN 125 (322)
T ss_dssp CTTCEEEEEEE---TTEEE----EEEECT--TCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTS
T ss_pred CCCceEEEEEE---CCEeE----EecCCC--CCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCC
Confidence 34555666655 67554 466542 223355999999742 22334456667778765 999999999998764
Q ss_pred CCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCc----eeEEEEeCCcccchhh
Q 004839 540 GKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDL----FRAVVLEVPFLDATNT 615 (728)
Q Consensus 540 G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~----f~a~v~~~p~~d~~~~ 615 (728)
. ....++|+.++++||.++ .+|+++|+|+|+|+||.+++.++.+.++. ++++|+.+|++|+...
T Consensus 126 ~-----------~~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~ 193 (322)
T 3k6k_A 126 P-----------FPAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLS 193 (322)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCC
T ss_pred C-----------CchHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccC
Confidence 2 234689999999999987 46899999999999999999999877665 9999999999886531
Q ss_pred ccCCCCCCCcccccccCCCCCHHHHH----HH--------HccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHH
Q 004839 616 LLYPILPLIAADYEEFGYPGDIDDFH----AI--------RNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARV 683 (728)
Q Consensus 616 ~~~~~~~~~~~~~~~~g~p~~~~~~~----~~--------~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L 683 (728)
... ................. .+ ...||+....+ ...|+|+++|+.|.. ..++.+++++|
T Consensus 194 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~-~~pP~li~~G~~D~~--~~~~~~~~~~l 264 (322)
T 3k6k_A 194 RWS------NSNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLS-GLPEMLIHVGSEEAL--LSDSTTLAERA 264 (322)
T ss_dssp SHH------HHHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCT-TCCCEEEEEESSCTT--HHHHHHHHHHH
T ss_pred ccc------hhhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCccccccc-CCCcEEEEECCcCcc--HHHHHHHHHHH
Confidence 100 00000000000011111 11 12366654433 456899999999975 57899999999
Q ss_pred HhCCCCCCCccEEEEcCCCCCCCc----hhhhHHHHHHHHHHHHHhhc
Q 004839 684 RESTIYDPKRPILLNLTTDIVEEN----RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~afl~~~l~ 727 (728)
+++|++ ..+.++++++|++.. .....+......+||.++|+
T Consensus 265 ~~~g~~---~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3k6k_A 265 GAAGVS---VELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARIS 309 (322)
T ss_dssp HHTTCC---EEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC
T ss_pred HHCCCC---EEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHh
Confidence 999854 233338999998643 23344556777899998874
No 60
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.80 E-value=1.8e-19 Score=188.28 Aligned_cols=211 Identities=17% Similarity=0.118 Sum_probs=150.2
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCC-CcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccc
Q 004839 466 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGE-LLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWH 544 (728)
Q Consensus 466 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~ 544 (728)
....+.+. +..+.+.+++|++. .++.|+||++|||... .....|....+.|+++||+|+.+|+||+++..
T Consensus 57 ~~~~i~y~---~~~~~~~~~~p~~~--~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~---- 127 (303)
T 4e15_A 57 TVDHLRYG---EGRQLVDVFYSEKT--TNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT---- 127 (303)
T ss_dssp EEEEEECS---STTCEEEEEECTTC--CTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC----
T ss_pred ceeeeccC---CCCcEEEEEecCCC--CCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC----
Confidence 34455554 44456667788642 4568999999997532 22334556678899999999999999998642
Q ss_pred cccccCCCCCcHHHHHHHHHHHHHc-CCCCCCcEEEEEeCccHHHHHHHHHhCC-------CceeEEEEeCCcccchhhc
Q 004839 545 HDGRRTKKLNSIKDFISCARFLIEK-EIVKEHKLAGWGYSAGGLLVAAAINCCP-------DLFRAVVLEVPFLDATNTL 616 (728)
Q Consensus 545 ~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~p-------~~f~a~v~~~p~~d~~~~~ 616 (728)
.....+|+.++++|+.+. ...+++||+++|+|+||++++.++.+.+ ++++++|+.+|+.|+....
T Consensus 128 -------~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~ 200 (303)
T 4e15_A 128 -------LEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELS 200 (303)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHH
T ss_pred -------hhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhh
Confidence 123678999999999863 2346899999999999999999988643 3799999999999986543
Q ss_pred cCCCCCCCcccccccCCCCCHHHHHHHHccCcc-ccccc---CCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCC
Q 004839 617 LYPILPLIAADYEEFGYPGDIDDFHAIRNYSPY-DNIQK---DVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPK 692 (728)
Q Consensus 617 ~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~-~~i~~---~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~ 692 (728)
.... . . ....++... +.+...||+ ..+.. .+..|+|++||+.|..||+.++.+++++|+++|++
T Consensus 201 ~~~~-~-~--~~~~~~~~~-----~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~--- 268 (303)
T 4e15_A 201 NLES-V-N--PKNILGLNE-----RNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYK--- 268 (303)
T ss_dssp TCTT-T-S--GGGTTCCCT-----TTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCC---
T ss_pred cccc-c-c--hhhhhcCCH-----HHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCc---
Confidence 2110 0 0 011122221 123566887 45543 12889999999999999999999999999998753
Q ss_pred ccEEEEcCCCCC
Q 004839 693 RPILLNLTTDIV 704 (728)
Q Consensus 693 ~~~~~~~~~gH~ 704 (728)
..+.+++++||+
T Consensus 269 ~~~~~~~g~~H~ 280 (303)
T 4e15_A 269 ASFTLFKGYDHF 280 (303)
T ss_dssp EEEEEEEEEETT
T ss_pred eEEEEeCCCCch
Confidence 233338999996
No 61
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.79 E-value=5.8e-18 Score=172.14 Aligned_cols=241 Identities=15% Similarity=0.093 Sum_probs=157.1
Q ss_pred CceEEEEEE-ECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCc
Q 004839 464 FYSCEQYDV-PSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKK 542 (728)
Q Consensus 464 ~~~~~~~~~-~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~ 542 (728)
....+.+.+ .+.||.++.+....+.+ .+.|+||++||+.+......+......|+++||.|+.+|+||+|.+...
T Consensus 8 ~~~~~~~~~~~~~~g~~l~~~~~~~~~----~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 83 (270)
T 3llc_A 8 PIETHAITVGQGSDARSIAALVRAPAQ----DERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGA 83 (270)
T ss_dssp CEEEEEEEESSGGGCEEEEEEEECCSS----TTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSC
T ss_pred CCCcceEEEeeccCcceEEEEeccCCC----CCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCc
Confidence 345566666 66799888876544321 2368999999976654333344466778889999999999999976443
Q ss_pred cccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHh---CC---CceeEEEEeCCcccchhhc
Q 004839 543 WHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC---CP---DLFRAVVLEVPFLDATNTL 616 (728)
Q Consensus 543 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~---~p---~~f~a~v~~~p~~d~~~~~ 616 (728)
.. ...++++.+.+..+++. ...++++++|+|+||.+++.++.+ +| ++++++|+.+|..++....
T Consensus 84 ~~--------~~~~~~~~~d~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~ 153 (270)
T 3llc_A 84 FR--------DGTISRWLEEALAVLDH--FKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDL 153 (270)
T ss_dssp GG--------GCCHHHHHHHHHHHHHH--HCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHT
T ss_pred cc--------cccHHHHHHHHHHHHHH--hccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhh
Confidence 21 23555555555555432 125799999999999999999999 99 9999999999988765422
Q ss_pred cCCCCCCC-c---------ccccccC-CC--CCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHH
Q 004839 617 LYPILPLI-A---------ADYEEFG-YP--GDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARV 683 (728)
Q Consensus 617 ~~~~~~~~-~---------~~~~~~g-~p--~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L 683 (728)
....+... . .....+. .+ ......+.+........+.+ +++|+|+++|..|..||+.++.++++.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~~D~~v~~~~~~~~~~~~ 232 (270)
T 3llc_A 154 IEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMID-TGCPVHILQGMADPDVPYQHALKLVEHL 232 (270)
T ss_dssp TGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCC-CCSCEEEEEETTCSSSCHHHHHHHHHTS
T ss_pred hhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhc-CCCCEEEEecCCCCCCCHHHHHHHHHhc
Confidence 11111000 0 0000011 11 11233444555555566665 8999999999999999999999999888
Q ss_pred HhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHH
Q 004839 684 RESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIK 724 (728)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~ 724 (728)
.... ..+..++++||........-.......+||.+
T Consensus 233 ~~~~-----~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 233 PADD-----VVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp CSSS-----EEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred CCCC-----eeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 6522 23333789999754433333334456677754
No 62
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.78 E-value=1.9e-18 Score=178.42 Aligned_cols=242 Identities=10% Similarity=0.024 Sum_probs=154.6
Q ss_pred eEEEEEEEC-CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHH---HHHHHHHCCeEEEEEcCC--CCCC-
Q 004839 466 SCEQYDVPS-HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRS---ELKSLLDRGWVVAFADVR--GGGG- 538 (728)
Q Consensus 466 ~~~~~~~~s-~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~~~~l~~~Gy~v~~~d~R--G~g~- 538 (728)
..+.+.+.+ .+|.++++.++.|++.. +++.|+||++||+.+.. ..|.. ..+.++++||+|+.+|.+ |.+.
T Consensus 21 ~~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~ 97 (283)
T 4b6g_A 21 SQQVWAHHAQTLQCEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTE--QNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVP 97 (283)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECCCTT-CCCEEEEEEECCTTCCS--HHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSC
T ss_pred cEEEEEEechhhCCceEEEEEeCCCCC-CCCCCEEEEEcCCCCCc--cchhhcccHHHHHhhCCeEEEEecccccccccc
Confidence 344555544 56889999999998764 57799999999986644 23322 246667789999999964 4432
Q ss_pred --------CCCccccccccC-C-CCCcHHHH-HHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeC
Q 004839 539 --------GGKKWHHDGRRT-K-KLNSIKDF-ISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEV 607 (728)
Q Consensus 539 --------~G~~~~~~~~~~-~-~~~~~~D~-~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~ 607 (728)
.|..|+...... + +...+.+. ...+..++++.+.+++|++|+|+||||++++.++.++|++|+++++.+
T Consensus 98 ~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s 177 (283)
T 4b6g_A 98 NDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFS 177 (283)
T ss_dssp CCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEES
T ss_pred ccccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEEC
Confidence 223333221111 0 11132333 333434444444467899999999999999999999999999999999
Q ss_pred CcccchhhccCCCCCCCcccc-cccCCCCCHHHHHHHHccCcccccccC-CCCCeEEEEcCCCCCCCHH-HHHHHHHHHH
Q 004839 608 PFLDATNTLLYPILPLIAADY-EEFGYPGDIDDFHAIRNYSPYDNIQKD-VLYPAVLVTSSFNTRFGVW-EAAKWVARVR 684 (728)
Q Consensus 608 p~~d~~~~~~~~~~~~~~~~~-~~~g~p~~~~~~~~~~~~sP~~~i~~~-~~~P~lli~g~~D~~Vp~~-~~~~~~~~L~ 684 (728)
|+++..... +..... ..+|... ..+..++|...+.+. ...|++++||+.|..|+.. ++.+++++|+
T Consensus 178 ~~~~~~~~~------~~~~~~~~~~g~~~-----~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~ 246 (283)
T 4b6g_A 178 PILSPSLVP------WGEKAFTAYLGKDR-----EKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCR 246 (283)
T ss_dssp CCCCGGGSH------HHHHHHHHHHCSCG-----GGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHH
T ss_pred CccccccCc------chhhhHHhhcCCch-----HHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHH
Confidence 988764310 000000 1122211 123355666555431 2348999999999988873 2899999999
Q ss_pred hCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 685 ESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 685 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
+++++ ..+.++++++|.+..... .....++|+.++|.
T Consensus 247 ~~g~~---~~~~~~~g~~H~~~~~~~---~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 247 AANQP---VDVRFHKGYDHSYYFIAS---FIGEHIAYHAAFLK 283 (283)
T ss_dssp HHTCC---CEEEEETTCCSSHHHHHH---HHHHHHHHHHTTCC
T ss_pred HcCCC---ceEEEeCCCCcCHhHHHH---HHHHHHHHHHHhcC
Confidence 98864 233338999997533222 34556799988873
No 63
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.78 E-value=5.6e-18 Score=172.78 Aligned_cols=206 Identities=15% Similarity=0.126 Sum_probs=152.8
Q ss_pred CCCceEEEEEEECC--CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCC
Q 004839 462 SEFYSCEQYDVPSH--DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGG 539 (728)
Q Consensus 462 ~~~~~~~~~~~~s~--dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~ 539 (728)
...+..+.+.+++. +|.. .+.+++|... .+++.|+||++||..+.. ..|....+.|+++||.|+.+|+||+|..
T Consensus 20 ~g~~~~~~~~~~~~~~~~~~-~~~l~~p~~~-~~~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~~ 95 (262)
T 1jfr_A 20 RGPYATSQTSVSSLVASGFG-GGTIYYPTST-ADGTFGAVVISPGFTAYQ--SSIAWLGPRLASQGFVVFTIDTNTTLDQ 95 (262)
T ss_dssp SCSSCEEEEEECTTTCSSSC-CEEEEEESCC-TTCCEEEEEEECCTTCCG--GGTTTHHHHHHTTTCEEEEECCSSTTCC
T ss_pred CCCCCccceEecceeccCCC-ceeEEecCCC-CCCCCCEEEEeCCcCCCc--hhHHHHHHHHHhCCCEEEEeCCCCCCCC
Confidence 34566777888776 4432 4567788753 245689999999976543 3566678889999999999999998853
Q ss_pred CCccccccccCCCCCcHHHHHHHHHHHHH----cCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhh
Q 004839 540 GKKWHHDGRRTKKLNSIKDFISCARFLIE----KEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNT 615 (728)
Q Consensus 540 G~~~~~~~~~~~~~~~~~D~~~~~~~l~~----~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~ 615 (728)
.. ....|+.++++++.+ ...++.++++++|+|+||++++.++.++|+ ++++|+.+|+..
T Consensus 96 ~~------------~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~---- 158 (262)
T 1jfr_A 96 PD------------SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT---- 158 (262)
T ss_dssp HH------------HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS----
T ss_pred Cc------------hhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc----
Confidence 21 245788899999987 445678899999999999999999999998 899998877421
Q ss_pred ccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHH-HHHHHHHHHhCCCCCCCcc
Q 004839 616 LLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWE-AAKWVARVRESTIYDPKRP 694 (728)
Q Consensus 616 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~-~~~~~~~L~~~~~~~~~~~ 694 (728)
...+.+ ++.|+|+++|..|..||+.+ +.++++.++. +.+ ..
T Consensus 159 ---------------------------------~~~~~~-~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~-~~~---~~ 200 (262)
T 1jfr_A 159 ---------------------------------DKTWPE-LRTPTLVVGADGDTVAPVATHSKPFYESLPG-SLD---KA 200 (262)
T ss_dssp ---------------------------------CCCCTT-CCSCEEEEEETTCSSSCTTTTHHHHHHHSCT-TSC---EE
T ss_pred ---------------------------------cccccc-cCCCEEEEecCccccCCchhhHHHHHHHhhc-CCC---ce
Confidence 112333 67899999999999999998 9999999954 211 23
Q ss_pred EEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 695 ILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 695 ~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
+..++++||...... ..+......+||.++|.
T Consensus 201 ~~~~~~~~H~~~~~~-~~~~~~~i~~fl~~~l~ 232 (262)
T 1jfr_A 201 YLELRGASHFTPNTS-DTTIAKYSISWLKRFID 232 (262)
T ss_dssp EEEETTCCTTGGGSC-CHHHHHHHHHHHHHHHS
T ss_pred EEEeCCCCcCCcccc-hHHHHHHHHHHHHHHhc
Confidence 333789999865421 12334556899998874
No 64
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.78 E-value=1.4e-18 Score=171.13 Aligned_cols=186 Identities=10% Similarity=0.012 Sum_probs=127.8
Q ss_pred CCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHH---c
Q 004839 493 ENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIE---K 569 (728)
Q Consensus 493 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~---~ 569 (728)
....|+||++||. +.. ...|....+.|...|+.|++||.+|.+.|+..+...... ....+++..+.++.+++ .
T Consensus 19 ~~a~~~Vv~lHG~-G~~-~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~ 94 (210)
T 4h0c_A 19 QRAKKAVVMLHGR-GGT-AADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQ--NQPALDSALALVGEVVAEIEA 94 (210)
T ss_dssp TTCSEEEEEECCT-TCC-HHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGG--GTTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEEeCC-CCC-HHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCccc--chHHHHHHHHHHHHHHHHHHH
Confidence 3456899999983 222 133444456666789999999999888776555433222 22345555554444433 2
Q ss_pred CCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcc
Q 004839 570 EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPY 649 (728)
Q Consensus 570 ~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~ 649 (728)
..+|++||+++|+|+||++++.++.++|++|+++|+.+|.+-... . . +.
T Consensus 95 ~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~------~--------------~-----------~~ 143 (210)
T 4h0c_A 95 QGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQE------L--------------A-----------IG 143 (210)
T ss_dssp TTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSS------C--------------C-----------GG
T ss_pred hCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChh------h--------------h-----------hh
Confidence 457999999999999999999999999999999999887431100 0 0 00
Q ss_pred cccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEE--EcCCCCCCCchhhhHHHHHHHHHHHH
Q 004839 650 DNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEENRYLQCKESALETAFLI 723 (728)
Q Consensus 650 ~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~afl~ 723 (728)
.......++|++++||..|++||+.++++++++|+++|. ++.+ |++.||+... +++.....||.
T Consensus 144 ~~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~-----~v~~~~ypg~gH~i~~-----~el~~i~~wL~ 209 (210)
T 4h0c_A 144 NYKGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNA-----AVSQVVYPGRPHTISG-----DEIQLVNNTIL 209 (210)
T ss_dssp GCCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTC-----EEEEEEEETCCSSCCH-----HHHHHHHHTTT
T ss_pred hhhhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCC-----CeEEEEECCCCCCcCH-----HHHHHHHHHHc
Confidence 000111467999999999999999999999999999984 4444 8999997632 22344556664
No 65
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.78 E-value=4e-18 Score=185.97 Aligned_cols=239 Identities=12% Similarity=0.030 Sum_probs=158.8
Q ss_pred CceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCcc
Q 004839 464 FYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKW 543 (728)
Q Consensus 464 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~ 543 (728)
....+.+.++. +|..|+++++.|.+ .++.|+||++||..+.. ...+......|+++||.|+.+|+||+|......
T Consensus 165 ~~~~~~v~i~~-~g~~l~~~~~~P~~---~~~~P~vv~~hG~~~~~-~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~ 239 (415)
T 3mve_A 165 KYIIKQLEIPF-EKGKITAHLHLTNT---DKPHPVVIVSAGLDSLQ-TDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYP 239 (415)
T ss_dssp SSEEEEEEEEC-SSSEEEEEEEESCS---SSCEEEEEEECCTTSCG-GGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSC
T ss_pred CCCeEEEEEEE-CCEEEEEEEEecCC---CCCCCEEEEECCCCccH-HHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCC
Confidence 34678888887 88899999998875 35789999999965432 233444567788999999999999998653211
Q ss_pred ccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc--cCCCC
Q 004839 544 HHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL--LYPIL 621 (728)
Q Consensus 544 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~--~~~~~ 621 (728)
..........++++++.+.+.+|++||+++|+|+||++++.++..+|++++++|+.+|+++..... .....
T Consensus 240 -------~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~ 312 (415)
T 3mve_A 240 -------LTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQM 312 (415)
T ss_dssp -------CCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHTTS
T ss_pred -------CCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHHHh
Confidence 111122333567888888888899999999999999999999998999999999999986532110 00111
Q ss_pred CCCc-ccc-cccCCC-CCH-HHHHHHHccCcccc----cccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCc
Q 004839 622 PLIA-ADY-EEFGYP-GDI-DDFHAIRNYSPYDN----IQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKR 693 (728)
Q Consensus 622 ~~~~-~~~-~~~g~p-~~~-~~~~~~~~~sP~~~----i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~ 693 (728)
+... ... ..++.. ... .....+..+++... +.+ +++|+|+++|+.|..||+.++.++++.... .
T Consensus 313 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~PvLii~G~~D~~vp~~~~~~l~~~~~~-------~ 384 (415)
T 3mve_A 313 PKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRK-TKVPILAMSLEGDPVSPYSDNQMVAFFSTY-------G 384 (415)
T ss_dssp CHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSC-BSSCEEEEEETTCSSSCHHHHHHHHHTBTT-------C
T ss_pred HHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCC-CCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-------c
Confidence 1000 000 112221 221 22234455555432 334 789999999999999999999887773221 2
Q ss_pred cEEEEcC-CCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 694 PILLNLT-TDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 694 ~~~~~~~-~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
.+..+++ .+|. ..-+......+||.++|.
T Consensus 385 ~l~~i~g~~~h~-----~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 385 KAKKISSKTITQ-----GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp EEEEECCCSHHH-----HHHHHHHHHHHHHHHHHT
T ss_pred eEEEecCCCccc-----chHHHHHHHHHHHHHHhc
Confidence 3333566 2232 233345667899999874
No 66
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.77 E-value=8.8e-18 Score=170.97 Aligned_cols=232 Identities=12% Similarity=0.017 Sum_probs=152.0
Q ss_pred EEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCC-CCcCcccH-HHHHHHHHCCeEEEEEcCCCCCCCCCcccc
Q 004839 468 EQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYG-ELLDKRWR-SELKSLLDRGWVVAFADVRGGGGGGKKWHH 545 (728)
Q Consensus 468 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~-~~~~~~~~-~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~ 545 (728)
....+.+.||..+++.++.|.+ +++.|+||++||+.. ......|. .....|+++ |.|+.+|+||+++..
T Consensus 4 ~~~~~~~~dg~~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~----- 74 (275)
T 3h04_A 4 IKYKVITKDAFALPYTIIKAKN---QPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVS----- 74 (275)
T ss_dssp EEEEEECTTSCEEEEEEECCSS---SSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSC-----
T ss_pred eEEEEecCCcEEEEEEEEccCC---CCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCccc-----
Confidence 4567888999999999888763 346799999999762 11222333 455666666 999999999987531
Q ss_pred ccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCC---
Q 004839 546 DGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILP--- 622 (728)
Q Consensus 546 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~--- 622 (728)
.....+|+.++++++.++ .+.++++++|+|+||++++.++.+ ++++++|+.+|+.++..........
T Consensus 75 ------~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~ 144 (275)
T 3h04_A 75 ------LDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYA 144 (275)
T ss_dssp ------HHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHH
T ss_pred ------cchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhh
Confidence 123678999999999976 567899999999999999999997 7899999999998763221100000
Q ss_pred -----CCcccc------ccc-CCCCC-H-HHHHH----------HH-------ccCcc-cccccCCCCCeEEEEcCCCCC
Q 004839 623 -----LIAADY------EEF-GYPGD-I-DDFHA----------IR-------NYSPY-DNIQKDVLYPAVLVTSSFNTR 670 (728)
Q Consensus 623 -----~~~~~~------~~~-g~p~~-~-~~~~~----------~~-------~~sP~-~~i~~~~~~P~lli~g~~D~~ 670 (728)
+..... ... ..+.. . ..... +. .+... ..+.+ ++ |+|+++|+.|..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-P~lii~G~~D~~ 222 (275)
T 3h04_A 145 KIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKT-LP-PVFIAHCNGDYD 222 (275)
T ss_dssp HHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTT-CC-CEEEEEETTCSS
T ss_pred cccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhcc-CC-CEEEEecCCCCC
Confidence 000000 000 00000 0 00000 10 00000 11233 66 999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-hh-hhHHHHHHHHHHHHHhhc
Q 004839 671 FGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN-RY-LQCKESALETAFLIKMME 727 (728)
Q Consensus 671 Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~-~~~~~~~~~~afl~~~l~ 727 (728)
||+.++.++++++... .+..++++||.... .. ...+......+||.++|.
T Consensus 223 ~~~~~~~~~~~~~~~~-------~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 223 VPVEESEHIMNHVPHS-------TFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp SCTHHHHHHHTTCSSE-------EEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred CChHHHHHHHHhcCCc-------eEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 9999999998876542 23337999998654 22 123445667899999875
No 67
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.77 E-value=3.2e-18 Score=179.17 Aligned_cols=190 Identities=16% Similarity=0.191 Sum_probs=145.7
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.+|.. .+.+++|.+. .+.|+||++||..+.. ..|......|+++||.|+.+|+||.|+... .
T Consensus 79 ~~g~~-~~~~~~p~~~---~~~p~vv~~HG~~~~~--~~~~~~~~~la~~G~~vv~~d~~g~g~s~~------------~ 140 (306)
T 3vis_A 79 ADGFG-GGTIYYPREN---NTYGAIAISPGYTGTQ--SSIAWLGERIASHGFVVIAIDTNTTLDQPD------------S 140 (306)
T ss_dssp CSSSC-CEEEEEESSC---SCEEEEEEECCTTCCH--HHHHHHHHHHHTTTEEEEEECCSSTTCCHH------------H
T ss_pred cCCCc-ceEEEeeCCC---CCCCEEEEeCCCcCCH--HHHHHHHHHHHhCCCEEEEecCCCCCCCcc------------h
Confidence 56654 3467778653 2689999999976543 456777889999999999999999886421 2
Q ss_pred cHHHHHHHHHHHHHc------CCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccc
Q 004839 555 SIKDFISCARFLIEK------EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADY 628 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~------~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~ 628 (728)
..+|+.++++++.++ ..+|++||+++|+|+||.+++.++.++|+ ++++|+.+|+..
T Consensus 141 ~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~----------------- 202 (306)
T 3vis_A 141 RARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL----------------- 202 (306)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-----------------
T ss_pred HHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC-----------------
Confidence 347899999999987 77899999999999999999999999987 889998887432
Q ss_pred cccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHH-HHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc
Q 004839 629 EEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVW-EAAKWVARVRESTIYDPKRPILLNLTTDIVEEN 707 (728)
Q Consensus 629 ~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~-~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 707 (728)
...+.+ ++.|+|+++|+.|..||+. ++.+++++++..+ + ..+..++++||+...
T Consensus 203 --------------------~~~~~~-~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~-~---~~~~~~~g~gH~~~~ 257 (306)
T 3vis_A 203 --------------------NKSWRD-ITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPT-D---KAYLELDGASHFAPN 257 (306)
T ss_dssp --------------------CCCCTT-CCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTS-C---EEEEEETTCCTTGGG
T ss_pred --------------------cccccc-CCCCEEEEecCCCcccCcchhHHHHHHHhccCC-C---ceEEEECCCCccchh
Confidence 011233 6789999999999999998 7999999998754 1 233338999998654
Q ss_pred -hhhhHHHHHHHHHHHHHhhc
Q 004839 708 -RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 708 -~~~~~~~~~~~~afl~~~l~ 727 (728)
... +......+||.++|.
T Consensus 258 ~~~~--~~~~~i~~fl~~~l~ 276 (306)
T 3vis_A 258 ITNK--TIGMYSVAWLKRFVD 276 (306)
T ss_dssp SCCH--HHHHHHHHHHHHHHS
T ss_pred hchh--HHHHHHHHHHHHHcc
Confidence 222 234457899998874
No 68
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.77 E-value=1.8e-17 Score=169.66 Aligned_cols=219 Identities=15% Similarity=0.025 Sum_probs=147.9
Q ss_pred CCceEEEEEEECC-CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCc-----ccHHHHHHHHHC----CeEEEEEc
Q 004839 463 EFYSCEQYDVPSH-DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDK-----RWRSELKSLLDR----GWVVAFAD 532 (728)
Q Consensus 463 ~~~~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~-----~~~~~~~~l~~~----Gy~v~~~d 532 (728)
.....+.+.+.+. +|..+.+.++.|++...+++.|+||++||+.+..... .+......|+++ ||+|+.+|
T Consensus 28 ~~g~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d 107 (268)
T 1jjf_A 28 PRGQVVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPN 107 (268)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEEC
T ss_pred CCceEEEEEEeccccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeC
Confidence 4556778888765 6788999999999865567899999999976543211 122346677776 59999999
Q ss_pred CCCCCCCCCccccccccCCCCCcHHH-HHHHHHHHHHcCCC--CCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCc
Q 004839 533 VRGGGGGGKKWHHDGRRTKKLNSIKD-FISCARFLIEKEIV--KEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 609 (728)
Q Consensus 533 ~RG~g~~G~~~~~~~~~~~~~~~~~D-~~~~~~~l~~~~~~--d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~ 609 (728)
+|+.+.. +.. . + ....+| +.+.++++.++..+ |++||+|+|+|+||++++.++.++|++|+++|+.+|.
T Consensus 108 ~~~~~~~---~~~-~---~-~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~ 179 (268)
T 1jjf_A 108 TNAAGPG---IAD-G---Y-ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAA 179 (268)
T ss_dssp CCCCCTT---CSC-H---H-HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCC
T ss_pred CCCCCcc---ccc-c---H-HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCC
Confidence 9987631 000 0 0 011233 33455666554434 8999999999999999999999999999999999997
Q ss_pred ccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCC-eEEEEcCCCCCCCHHHHHHHHHHHHhCCC
Q 004839 610 LDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYP-AVLVTSSFNTRFGVWEAAKWVARVRESTI 688 (728)
Q Consensus 610 ~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P-~lli~g~~D~~Vp~~~~~~~~~~L~~~~~ 688 (728)
.++... ...+.... .. .. .+.| ++++||+.|..||. +.+++++|+++++
T Consensus 180 ~~~~~~------------~~~~~~~~--~~-------------~~-~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~ 229 (268)
T 1jjf_A 180 PNTYPN------------ERLFPDGG--KA-------------AR-EKLKLLFIACGTNDSLIGF--GQRVHEYCVANNI 229 (268)
T ss_dssp TTSCCH------------HHHCTTTT--HH-------------HH-HHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTC
T ss_pred CCCCch------------hhhcCcch--hh-------------hh-hcCceEEEEecCCCCCccH--HHHHHHHHHHCCC
Confidence 654210 00111111 00 11 2345 89999999998874 7889999999885
Q ss_pred CCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHh
Q 004839 689 YDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKM 725 (728)
Q Consensus 689 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~ 725 (728)
+ ..+.++++++|.+.... +.....+.||.++
T Consensus 230 ~---~~~~~~~g~~H~~~~~~---~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 230 N---HVYWLIQGGGHDFNVWK---PGLWNFLQMADEA 260 (268)
T ss_dssp C---CEEEEETTCCSSHHHHH---HHHHHHHHHHHHH
T ss_pred c---eEEEEcCCCCcCHhHHH---HHHHHHHHHHHhc
Confidence 4 23333899999864322 2345567888765
No 69
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.77 E-value=1.4e-17 Score=178.31 Aligned_cols=253 Identities=16% Similarity=0.057 Sum_probs=159.1
Q ss_pred CCCceEEEEEEECCC--Cc--EEEEEEEEcCCCCCCCCccEEEEEcCCCCCCc-Cccc-----HHHHHHHH-HCCeEEEE
Q 004839 462 SEFYSCEQYDVPSHD--GI--SVPLTIIYSPKYKKENQNPGLLHGHGAYGELL-DKRW-----RSELKSLL-DRGWVVAF 530 (728)
Q Consensus 462 ~~~~~~~~~~~~s~d--G~--~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~-~~~~-----~~~~~~l~-~~Gy~v~~ 530 (728)
+..+...++.+.+.| |. .+.++++.|.+. .++.|+|++.||...... .+++ ......|+ ++||+|+.
T Consensus 38 ~~~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~--~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~ 115 (377)
T 4ezi_A 38 HYDLQLYKINYKTQSPDGNLTIASGLVAMPIHP--VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVM 115 (377)
T ss_dssp CCCEEEEEEEEEEECTTSCEEEEEEEEEEESSC--SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEE
T ss_pred CCCcEEEEEEEEEECCCCCEEEEEEEEEECCCC--CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEE
Confidence 667888899998876 54 467899999864 467899999999754211 1221 13356688 99999999
Q ss_pred EcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHH-cCCCCCCcEEEEEeCccHHHHHHHHHhCCC-----ceeEEE
Q 004839 531 ADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIE-KEIVKEHKLAGWGYSAGGLLVAAAINCCPD-----LFRAVV 604 (728)
Q Consensus 531 ~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~-----~f~a~v 604 (728)
+|+||+|+++...+...........+.|.+.++..+.+ .+..+.+||+++|+|+||+++++++..+|+ .+++++
T Consensus 116 ~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~ 195 (377)
T 4ezi_A 116 PDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVA 195 (377)
T ss_dssp ECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEE
T ss_pred eCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEE
Confidence 99999998764211110010011234444444444444 355578999999999999999999876543 589999
Q ss_pred EeCCcccchhhcc----CCC--------------------CCCCccccc--------c-c-C----------CCC-----
Q 004839 605 LEVPFLDATNTLL----YPI--------------------LPLIAADYE--------E-F-G----------YPG----- 635 (728)
Q Consensus 605 ~~~p~~d~~~~~~----~~~--------------------~~~~~~~~~--------~-~-g----------~p~----- 635 (728)
+.++..|+...+. ... .|....... . + + .+.
T Consensus 196 ~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (377)
T 4ezi_A 196 PGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLI 275 (377)
T ss_dssp EESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGG
T ss_pred ecCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHH
Confidence 9999988764211 000 000000000 0 0 0 000
Q ss_pred -------------CHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcC--
Q 004839 636 -------------DIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLT-- 700 (728)
Q Consensus 636 -------------~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~-- 700 (728)
++...+.+.+.+... ..++.|+|++||..|..||+.++.++++++++.|. . .+..+++
T Consensus 276 ~~~~~~~~~~~~~~p~~~~~l~~~~~~~---~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v---~~~~~~~~~ 348 (377)
T 4ezi_A 276 FQPKFSNGIISKTDRNTEILKINFNHYD---FKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-F---VWIKSVSDA 348 (377)
T ss_dssp BCHHHHHHHHTTCSTTHHHHHHHHCCCC---SCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-C---EEEEESCSS
T ss_pred hchhhhhhcccccchHHHHHHHHhcccC---CCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-E---EEEEcCCCC
Confidence 001111122222211 12788999999999999999999999999998872 1 2222788
Q ss_pred CCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 701 TDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 701 ~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
.+|.... .......++||.++++
T Consensus 349 ~~H~~~~----~~~~~~~~~wl~~~~~ 371 (377)
T 4ezi_A 349 LDHVQAH----PFVLKEQVDFFKQFER 371 (377)
T ss_dssp CCTTTTH----HHHHHHHHHHHHHHHT
T ss_pred CCccChH----HHHHHHHHHHHHHhhc
Confidence 8897643 2334567899998764
No 70
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.77 E-value=2.2e-17 Score=164.60 Aligned_cols=219 Identities=12% Similarity=-0.021 Sum_probs=151.2
Q ss_pred ECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCcccccccc---
Q 004839 473 PSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRR--- 549 (728)
Q Consensus 473 ~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~--- 549 (728)
...+|. ++.++.|.+ +.|+||++||..+.. ..|......|+++||.|+.+|+||+|.....+......
T Consensus 8 ~~~~g~--~~~~~~~~~-----~~~~vv~~hG~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~ 78 (238)
T 1ufo_A 8 LTLAGL--SVLARIPEA-----PKALLLALHGLQGSK--EHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYV 78 (238)
T ss_dssp EEETTE--EEEEEEESS-----CCEEEEEECCTTCCH--HHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHH
T ss_pred cccCCE--EEEEEecCC-----CccEEEEECCCcccc--hHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchh
Confidence 334664 444566653 569999999976533 34555567788899999999999998754332211100
Q ss_pred ----CCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCc
Q 004839 550 ----TKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIA 625 (728)
Q Consensus 550 ----~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~ 625 (728)
.......+|+.++++++.+++. ++++++|+|+||.+++.++.++|++++++++.+|...... ...
T Consensus 79 ~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~---~~~----- 147 (238)
T 1ufo_A 79 EEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKL---PQG----- 147 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCC---CTT-----
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchh---hhh-----
Confidence 0011245777888888876654 7999999999999999999999999998888776432110 000
Q ss_pred ccccccCCCCCHHHHHHHHccCcccccccCC-CCCeEEEEcCCCCCCCHHHHHHHHHHHH-hCCC-CCCCccEEEEcCCC
Q 004839 626 ADYEEFGYPGDIDDFHAIRNYSPYDNIQKDV-LYPAVLVTSSFNTRFGVWEAAKWVARVR-ESTI-YDPKRPILLNLTTD 702 (728)
Q Consensus 626 ~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~-~~P~lli~g~~D~~Vp~~~~~~~~~~L~-~~~~-~~~~~~~~~~~~~g 702 (728)
.+..| +..+.+..+++...+.+ + +.|+|+++|..|..||+.++.++++.++ ..+. + ..+..++++|
T Consensus 148 ----~~~~~---~~~~~~~~~~~~~~~~~-~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 216 (238)
T 1ufo_A 148 ----QVVED---PGVLALYQAPPATRGEA-YGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGR---LARFVEEGAG 216 (238)
T ss_dssp ----CCCCC---HHHHHHHHSCGGGCGGG-GTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCC---EEEEEETTCC
T ss_pred ----hccCC---cccchhhcCChhhhhhh-ccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCc---eEEEEeCCCC
Confidence 01222 23556677788877776 6 8999999999999999999999999998 7653 2 2333378999
Q ss_pred CCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 703 IVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 703 H~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
|.... +......+||.++|.
T Consensus 217 H~~~~-----~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 217 HTLTP-----LMARVGLAFLEHWLE 236 (238)
T ss_dssp SSCCH-----HHHHHHHHHHHHHHH
T ss_pred cccHH-----HHHHHHHHHHHHHHh
Confidence 98643 223445688887763
No 71
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.76 E-value=1.3e-17 Score=175.04 Aligned_cols=231 Identities=16% Similarity=0.100 Sum_probs=154.8
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCC-CCcCcccHHHHHHHH-HCCeEEEEEcCCCCCCCCCcc
Q 004839 466 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYG-ELLDKRWRSELKSLL-DRGWVVAFADVRGGGGGGKKW 543 (728)
Q Consensus 466 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~-~~~~~~~~~~~~~l~-~~Gy~v~~~d~RG~g~~G~~~ 543 (728)
..+.+.+++.|| .+++.++ +. .++.|+||++|||.. ......|......|+ +.||.|+.+|+||+|++.
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~----~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~--- 125 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ----KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHK--- 125 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES----SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSC---
T ss_pred eEEEEEecCCCC-cEEEEEE-cC----CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCC---
Confidence 688899999888 8998887 42 356799999999752 122345677778888 579999999999998752
Q ss_pred ccccccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhCCCc----eeEEEEeCCcccchhhc
Q 004839 544 HHDGRRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCCPDL----FRAVVLEVPFLDATNTL 616 (728)
Q Consensus 544 ~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~~----f~a~v~~~p~~d~~~~~ 616 (728)
.....+|+.++++|+.+.. .+|++||+++|+|+||++++.++.++|++ ++++|+.+|++|.....
T Consensus 126 --------~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~ 197 (311)
T 1jji_A 126 --------FPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPT 197 (311)
T ss_dssp --------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCC
T ss_pred --------CCCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCC
Confidence 1235789999999998752 46888999999999999999998877765 99999999998864210
Q ss_pred ----cCCCCC--CCccc---c-ccc-CCCCCHHHHHHHHccCccc-ccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHH
Q 004839 617 ----LYPILP--LIAAD---Y-EEF-GYPGDIDDFHAIRNYSPYD-NIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVR 684 (728)
Q Consensus 617 ----~~~~~~--~~~~~---~-~~~-g~p~~~~~~~~~~~~sP~~-~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~ 684 (728)
.....+ +.... + ..+ +.+.. . .....+|+. .+.. -.|+|+++|+.|..+ .++.+++++|+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~p~~~~l~~--~~P~li~~G~~D~l~--~~~~~~~~~l~ 269 (311)
T 1jji_A 198 PSLLEFGEGLWILDQKIMSWFSEQYFSREED--K--FNPLASVIFADLEN--LPPALIITAEYDPLR--DEGEVFGQMLR 269 (311)
T ss_dssp HHHHHTSSSCSSCCHHHHHHHHHHHCSSGGG--G--GCTTTSGGGSCCTT--CCCEEEEEEEECTTH--HHHHHHHHHHH
T ss_pred ccHHHhcCCCccCCHHHHHHHHHHhCCCCcc--C--CCcccCcccccccC--CChheEEEcCcCcch--HHHHHHHHHHH
Confidence 000000 00000 0 000 10000 0 001234543 2222 258999999999876 47889999999
Q ss_pred hCCCCCCCccEEEEcCCCCCCCc-h---hhhHHHHHHHHHHHHH
Q 004839 685 ESTIYDPKRPILLNLTTDIVEEN-R---YLQCKESALETAFLIK 724 (728)
Q Consensus 685 ~~~~~~~~~~~~~~~~~gH~~~~-~---~~~~~~~~~~~afl~~ 724 (728)
+++++ ..+..+++++|++.. . ....+......+||.+
T Consensus 270 ~~g~~---~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 270 RAGVE---ASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HTTCC---EEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HcCCC---EEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 98854 233338899998653 1 2333445556788764
No 72
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.76 E-value=3.1e-18 Score=174.54 Aligned_cols=200 Identities=16% Similarity=0.098 Sum_probs=148.6
Q ss_pred EEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCC-CCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCcccccc
Q 004839 469 QYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAY-GELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDG 547 (728)
Q Consensus 469 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~-~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~ 547 (728)
...++-.+|..+.+.++.|.+ ++.|+||++|||. .......|......|+++||.|+.+|+||++++.
T Consensus 40 ~~~i~~~~~~~~~~~~~~p~~----~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~------- 108 (262)
T 2pbl_A 40 RLNLSYGEGDRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVR------- 108 (262)
T ss_dssp EEEEESSSSTTCEEEEECCSS----SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSC-------
T ss_pred ccccccCCCCCceEEEEccCC----CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCC-------
Confidence 344555567667777777764 4579999999964 2223345666778899999999999999987531
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC------CCceeEEEEeCCcccchhhccCCCC
Q 004839 548 RRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC------PDLFRAVVLEVPFLDATNTLLYPIL 621 (728)
Q Consensus 548 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~------p~~f~a~v~~~p~~d~~~~~~~~~~ 621 (728)
.....+|+.++++++..+.. ++++++|+|+||++++.++.++ |++++++|+.+|+.++...... .
T Consensus 109 ----~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~-~- 179 (262)
T 2pbl_A 109 ----ISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT-S- 179 (262)
T ss_dssp ----HHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS-T-
T ss_pred ----hHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhh-h-
Confidence 12357888999999987643 7999999999999999999887 8999999999998886542211 0
Q ss_pred CCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCC
Q 004839 622 PLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTT 701 (728)
Q Consensus 622 ~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 701 (728)
....+.. ..+.+...+|...+.. ++.|+|+++|+.|..||+.++.+++++++ . .+.+++++
T Consensus 180 -----~~~~~~~-----~~~~~~~~~~~~~~~~-~~~P~lii~G~~D~~~~~~~~~~~~~~~~--~------~~~~~~~~ 240 (262)
T 2pbl_A 180 -----MNEKFKM-----DADAAIAESPVEMQNR-YDAKVTVWVGGAERPAFLDQAIWLVEAWD--A------DHVIAFEK 240 (262)
T ss_dssp -----THHHHCC-----CHHHHHHTCGGGCCCC-CSCEEEEEEETTSCHHHHHHHHHHHHHHT--C------EEEEETTC
T ss_pred -----hhhhhCC-----CHHHHHhcCcccccCC-CCCCEEEEEeCCCCcccHHHHHHHHHHhC--C------eEEEeCCC
Confidence 0001111 1234566788887776 89999999999999999999999999997 2 22337999
Q ss_pred CCCCCc
Q 004839 702 DIVEEN 707 (728)
Q Consensus 702 gH~~~~ 707 (728)
||+...
T Consensus 241 ~H~~~~ 246 (262)
T 2pbl_A 241 HHFNVI 246 (262)
T ss_dssp CTTTTT
T ss_pred CcchHH
Confidence 998643
No 73
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.76 E-value=1e-17 Score=170.49 Aligned_cols=238 Identities=13% Similarity=0.016 Sum_probs=149.0
Q ss_pred ceEEEEEEEC-CCCcEEEEEEEEcCCCC----CCCCccEEEEEcCCCCCCcCcccHH--HHHHHH-HCCeEEEEEcCCCC
Q 004839 465 YSCEQYDVPS-HDGISVPLTIIYSPKYK----KENQNPGLLHGHGAYGELLDKRWRS--ELKSLL-DRGWVVAFADVRGG 536 (728)
Q Consensus 465 ~~~~~~~~~s-~dG~~i~~~l~~p~~~~----~~~~~P~vv~~hGg~~~~~~~~~~~--~~~~l~-~~Gy~v~~~d~RG~ 536 (728)
...+.+++.+ .+|..+++.++.|++.. ++++.|+||++||+.+.. ..|.. ....++ ++|++|+.+|++++
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 82 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNH--NSWLKRTNVERLLRGTNLIVVMPNTSNG 82 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCT--THHHHHSCHHHHTTTCCCEEEECCCTTS
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCH--HHHHhccCHHHHHhcCCeEEEEECCCCC
Confidence 3456667765 46889999999998752 356789999999986543 34444 344454 47999999999987
Q ss_pred CCCCCccccccccCCCCCcHH----HHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccc
Q 004839 537 GGGGKKWHHDGRRTKKLNSIK----DFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDA 612 (728)
Q Consensus 537 g~~G~~~~~~~~~~~~~~~~~----D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~ 612 (728)
+..... ......+ |+...++.+..+..+|+++++++|+|+||++++.++. +|++|+++|+.+|..++
T Consensus 83 ~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~ 153 (263)
T 2uz0_A 83 WYTDTQ--------YGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSF 153 (263)
T ss_dssp TTSBCT--------TSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCS
T ss_pred ccccCC--------CcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcch
Confidence 642111 1112233 3333343333224568899999999999999999999 89999999999999876
Q ss_pred hhhccCCCCCCCcccc-cccCCCCCHHHHHHHHccCcccccccCCC--CCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCC
Q 004839 613 TNTLLYPILPLIAADY-EEFGYPGDIDDFHAIRNYSPYDNIQKDVL--YPAVLVTSSFNTRFGVWEAAKWVARVRESTIY 689 (728)
Q Consensus 613 ~~~~~~~~~~~~~~~~-~~~g~p~~~~~~~~~~~~sP~~~i~~~~~--~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~ 689 (728)
...............+ ..++.+.. ..+..++|...+.+ +. .|+|++||..|..|+ ++.+++++|++.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~~ 226 (263)
T 2uz0_A 154 QNFSPESQNLGSPAYWRGVFGEIRD----WTTSPYSLESLAKK-SDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGFD 226 (263)
T ss_dssp SSCCGGGTTCSCHHHHHHHHCCCSC----TTTSTTSHHHHGGG-CCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTCE
T ss_pred hhccccccccccchhHHHHcCChhh----hccccCCHHHHHHh-ccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCCC
Confidence 5311000000000000 11222211 12234566666654 33 799999999998773 678999999998742
Q ss_pred CCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 690 DPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 690 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
..+.++++ ||.+.... +.....++||.++|.
T Consensus 227 ---~~~~~~~g-~H~~~~~~---~~~~~~~~~l~~~l~ 257 (263)
T 2uz0_A 227 ---VTYSHSAG-THEWYYWE---KQLEVFLTTLPIDFK 257 (263)
T ss_dssp ---EEEEEESC-CSSHHHHH---HHHHHHHHHSSSCCC
T ss_pred ---eEEEECCC-CcCHHHHH---HHHHHHHHHHHhhcc
Confidence 12222777 99753222 334567889887764
No 74
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.76 E-value=3.6e-17 Score=170.98 Aligned_cols=245 Identities=14% Similarity=0.025 Sum_probs=157.3
Q ss_pred ceEEEEEEECC-CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHH---HHHHHHCCeEEEEEcCCCCCCCC
Q 004839 465 YSCEQYDVPSH-DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSE---LKSLLDRGWVVAFADVRGGGGGG 540 (728)
Q Consensus 465 ~~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~---~~~l~~~Gy~v~~~d~RG~g~~G 540 (728)
...+.+++.|. .|.+++++ +.|.. ++.|+|+++||+.+......|... .+.++++|++|+++|.++++.|.
T Consensus 7 ~~v~~~~~~S~~~~~~i~v~-~~p~~----~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~ 81 (304)
T 1sfr_A 7 LPVEYLQVPSPSMGRDIKVQ-FQSGG----ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYS 81 (304)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS----TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTC
T ss_pred ceEEEEEEECccCCCceEEE-ECCCC----CCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCcccc
Confidence 34566777765 46778776 44432 568999999998532223344432 35677789999999998765542
Q ss_pred Ccccccccc--CCCCCcHHHHH--HHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc
Q 004839 541 KKWHHDGRR--TKKLNSIKDFI--SCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL 616 (728)
Q Consensus 541 ~~~~~~~~~--~~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~ 616 (728)
.|...... ..+...+++++ +.+.++.++--+++++++|+|+||||++++.++.++|++|+++|+.+|.+++....
T Consensus 82 -~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~ 160 (304)
T 1sfr_A 82 -DWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAM 160 (304)
T ss_dssp -BCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTT
T ss_pred -ccCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccc
Confidence 22211100 00123555553 33444444334678899999999999999999999999999999999987754210
Q ss_pred cCC-------CCCCCcccccccCCCCCHHHHHHHHccCcccccccC--CCCCeEEEEcCCCC--------------CCCH
Q 004839 617 LYP-------ILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKD--VLYPAVLVTSSFNT--------------RFGV 673 (728)
Q Consensus 617 ~~~-------~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~--~~~P~lli~g~~D~--------------~Vp~ 673 (728)
... ... .......||.+.. +.+.+.+|+.++.+. .+.|+++++|+.|+ +|+.
T Consensus 161 ~~~~~~~~~~~~~-~~~~~~~~g~~~~----~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~ 235 (304)
T 1sfr_A 161 GPTLIGLAMGDAG-GYKASDMWGPKED----PAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVR 235 (304)
T ss_dssp HHHHHHHHHHHTT-SCCHHHHHCSTTS----THHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHH
T ss_pred hhhhhhHhhhhcc-ccchHHhcCCcch----hhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHH
Confidence 000 000 0001123455432 246677888766541 25788888998887 7899
Q ss_pred HHHHHHHHHHHhCC-CCCCCccEEE--EcCCCCCCCchhhhHHHHHHHHHHHHHhhcC
Q 004839 674 WEAAKWVARVREST-IYDPKRPILL--NLTTDIVEENRYLQCKESALETAFLIKMMES 728 (728)
Q Consensus 674 ~~~~~~~~~L~~~~-~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~afl~~~l~~ 728 (728)
.++++++++|+++| ++ +.+ +++++|....... .+...+.||.++|++
T Consensus 236 ~~~~~~~~~L~~~G~~~-----v~~~~~~~g~H~~~~w~~---~l~~~l~~l~~~l~~ 285 (304)
T 1sfr_A 236 TSNIKFQDAYNAGGGHN-----GVFDFPDSGTHSWEYWGA---QLNAMKPDLQRALGA 285 (304)
T ss_dssp HHHHHHHHHHHHTTCCS-----EEEECCSCCCSSHHHHHH---HHHHTHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCc-----eEEEecCCCccCHHHHHH---HHHHHHHHHHHhcCC
Confidence 99999999999988 64 334 5678996432222 234568899998863
No 75
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.76 E-value=4.5e-18 Score=193.40 Aligned_cols=242 Identities=13% Similarity=0.110 Sum_probs=165.0
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcC--cccHHHH-HHHHHCCeEEEEEcCCCCCCCCCc
Q 004839 466 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLD--KRWRSEL-KSLLDRGWVVAFADVRGGGGGGKK 542 (728)
Q Consensus 466 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~--~~~~~~~-~~l~~~Gy~v~~~d~RG~g~~G~~ 542 (728)
..+.+.++..||.+|.+.++.|++ .++.|+||+.||. +.... ..|.... +.|+++||+|+.+|+||+|+++..
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~---~~~~P~vv~~~~~-g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~ 83 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDA---DGPVPVLLVRNPY-DKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGE 83 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECC---SSCEEEEEEEESS-CTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEEEEEEECCCCCEEEEEEEECCC---CCCeeEEEEECCc-CCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCc
Confidence 456789999999999999999975 2578999998853 22211 1122123 889999999999999999998766
Q ss_pred cccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCc-ccchhhccCCCC
Q 004839 543 WHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF-LDATNTLLYPIL 621 (728)
Q Consensus 543 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~-~d~~~~~~~~~~ 621 (728)
+.. .....+|+.++++||.++.+.+ .||+++|+||||+++++++.++|+.++|+|+.+|. .|+........-
T Consensus 84 ~~~------~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~~~~~~gG 156 (587)
T 3i2k_A 84 FVP------HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPGG 156 (587)
T ss_dssp CCT------TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCSCTTC
T ss_pred ccc------ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccccceeecCC
Confidence 543 2357899999999999988876 89999999999999999999889999999999998 776532111110
Q ss_pred CCCc----cccc--------------------------------cc--CCCC-C------------------HHHHHHHH
Q 004839 622 PLIA----ADYE--------------------------------EF--GYPG-D------------------IDDFHAIR 644 (728)
Q Consensus 622 ~~~~----~~~~--------------------------------~~--g~p~-~------------------~~~~~~~~ 644 (728)
.+.. .|.. .| ..|. + +..-+++.
T Consensus 157 ~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~yw~ 236 (587)
T 3i2k_A 157 ALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDNDESWQ 236 (587)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCCSCCHHHH
T ss_pred ccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCCCCChHHh
Confidence 0000 0100 00 0000 0 00113456
Q ss_pred ccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc---------hhhhH---
Q 004839 645 NYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN---------RYLQC--- 712 (728)
Q Consensus 645 ~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~---------~~~~~--- 712 (728)
+.|+...+.+ |+.|+|+++|-.|.. ...+.+++++|+..+. ..+++-| ..|+... ....+
T Consensus 237 ~~s~~~~l~~-I~vPvL~v~Gw~D~~--~~~~~~~~~~l~~~~~----~~L~iGP-w~H~~~~~~~g~~~~g~~~~~~~~ 308 (587)
T 3i2k_A 237 SISLFERLGG-LATPALITAGWYDGF--VGESLRTFVAVKDNAD----ARLVVGP-WSHSNLTGRNADRKFGIAATYPIQ 308 (587)
T ss_dssp TTCCHHHHTT-CCCCEEEEEEEECTT--HHHHHHHHHHHTTTSC----EEEEEEE-EETTBCSSEETTEECCGGGSCCHH
T ss_pred cCChhhhhcc-CCCCEEEEccCCCcc--chHHHHHHHHHhhcCC----CEEEECC-ccccCccccCCCcccCCccccccc
Confidence 6677777776 999999999999965 4568899999987662 2333322 2243210 11111
Q ss_pred HHHHHHHHHHHHhh
Q 004839 713 KESALETAFLIKMM 726 (728)
Q Consensus 713 ~~~~~~~afl~~~l 726 (728)
+....+++||+++|
T Consensus 309 ~~~~~~~~wFD~~L 322 (587)
T 3i2k_A 309 EATTMHKAFFDRHL 322 (587)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHh
Confidence 22366889999998
No 76
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.74 E-value=2.8e-17 Score=161.51 Aligned_cols=190 Identities=12% Similarity=0.052 Sum_probs=132.4
Q ss_pred EEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccc-c-----ccCC----CC
Q 004839 484 IIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHD-G-----RRTK----KL 553 (728)
Q Consensus 484 l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~-~-----~~~~----~~ 553 (728)
++.|.. +.+.| ||++||..+.. ..|....+.|+ .||.|+.+|.++....+..|+.. + .... ..
T Consensus 8 ~~~~~~---~~~~p-vv~lHG~g~~~--~~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~ 80 (209)
T 3og9_A 8 VFKAGR---KDLAP-LLLLHSTGGDE--HQLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLD 80 (209)
T ss_dssp EEECCC---TTSCC-EEEECCTTCCT--TTTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHH
T ss_pred EEeCCC---CCCCC-EEEEeCCCCCH--HHHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHH
Confidence 445542 24568 99999965433 45666777776 89999999977554445556541 0 1111 11
Q ss_pred CcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCC
Q 004839 554 NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGY 633 (728)
Q Consensus 554 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~ 633 (728)
...+++.+.++.+.++..+|+++++++|+|+||++++.++.++|++++++|+.+|......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------- 141 (209)
T 3og9_A 81 EETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF------------------- 141 (209)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC-------------------
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc-------------------
Confidence 2345555666666666667999999999999999999999999999999999988543210
Q ss_pred CCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEE-EcCCCCCCCchhhhH
Q 004839 634 PGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL-NLTTDIVEENRYLQC 712 (728)
Q Consensus 634 p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~-~~~~gH~~~~~~~~~ 712 (728)
. .... ....|+|++||..|+.||+.++++++++|++.++ ++.+ ..++||.+..
T Consensus 142 -~--------------~~~~-~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~-----~~~~~~~~~gH~~~~----- 195 (209)
T 3og9_A 142 -E--------------QTVQ-LDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGC-----QLEIYESSLGHQLTQ----- 195 (209)
T ss_dssp -C--------------CCCC-CTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTC-----EEEEEECSSTTSCCH-----
T ss_pred -c--------------cccc-ccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCC-----ceEEEEcCCCCcCCH-----
Confidence 0 0012 2578999999999999999999999999999884 3444 3348998743
Q ss_pred HHHHHHHHHHHHh
Q 004839 713 KESALETAFLIKM 725 (728)
Q Consensus 713 ~~~~~~~afl~~~ 725 (728)
+......+||.++
T Consensus 196 ~~~~~~~~~l~~~ 208 (209)
T 3og9_A 196 EEVLAAKKWLTET 208 (209)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 2234466888764
No 77
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.74 E-value=2.5e-17 Score=168.10 Aligned_cols=216 Identities=14% Similarity=0.112 Sum_probs=140.7
Q ss_pred CccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 574 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 574 (728)
+.|+||++||..+.. ..|......|+++||.|+.+|+||+|......... .-....+|+.++++++.++ .
T Consensus 39 ~~~~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~----~~~~~~~d~~~~i~~l~~~----~ 108 (270)
T 3rm3_A 39 GPVGVLLVHGFTGTP--HSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERT----TFHDWVASVEEGYGWLKQR----C 108 (270)
T ss_dssp SSEEEEEECCTTCCG--GGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTC----CHHHHHHHHHHHHHHHHTT----C
T ss_pred CCeEEEEECCCCCCh--hHHHHHHHHHHHCCCEEEEeCCCCCCCCccccccC----CHHHHHHHHHHHHHHHHhh----C
Confidence 348999999976543 45778889999999999999999999763221110 1112356777777777754 5
Q ss_pred CcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccC-CCCCCCcccccccCCC-------------CCHHHH
Q 004839 575 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLY-PILPLIAADYEEFGYP-------------GDIDDF 640 (728)
Q Consensus 575 ~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~-~~~~~~~~~~~~~g~p-------------~~~~~~ 640 (728)
++++++|+|+||++++.++.++|+ ++++|+.+|..++...... ........+...++.. ......
T Consensus 109 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (270)
T 3rm3_A 109 QTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASL 187 (270)
T ss_dssp SEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEEEHHHH
T ss_pred CcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcccccChhHH
Confidence 799999999999999999999999 9999999998776542110 0000000001111000 000111
Q ss_pred HHHH-cc-CcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHH
Q 004839 641 HAIR-NY-SPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALE 718 (728)
Q Consensus 641 ~~~~-~~-sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 718 (728)
..+. .. .....+.+ ++.|+|+++|..|..||+.++.+++++++... ..+.+++++||........-+.....
T Consensus 188 ~~~~~~~~~~~~~~~~-~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~~~~~~~~~~~~i 261 (270)
T 3rm3_A 188 LQLARLMAQTKAKLDR-IVCPALIFVSDEDHVVPPGNADIIFQGISSTE-----KEIVRLRNSYHVATLDYDQPMIIERS 261 (270)
T ss_dssp HHHHHHHHHHHHTGGG-CCSCEEEEEETTCSSSCTTHHHHHHHHSCCSS-----EEEEEESSCCSCGGGSTTHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhh-cCCCEEEEECCCCcccCHHHHHHHHHhcCCCc-----ceEEEeCCCCcccccCccHHHHHHHH
Confidence 1111 00 11133454 78999999999999999999999999987543 23344899999865422223335557
Q ss_pred HHHHHHhhc
Q 004839 719 TAFLIKMME 727 (728)
Q Consensus 719 ~afl~~~l~ 727 (728)
.+||.++.|
T Consensus 262 ~~fl~~~~~ 270 (270)
T 3rm3_A 262 LEFFAKHAG 270 (270)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHhcCC
Confidence 899988754
No 78
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.74 E-value=1.2e-17 Score=171.94 Aligned_cols=211 Identities=13% Similarity=0.007 Sum_probs=140.6
Q ss_pred EEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHC--CeEEEEEcCC---CCCCCCCccc
Q 004839 470 YDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDR--GWVVAFADVR---GGGGGGKKWH 544 (728)
Q Consensus 470 ~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~--Gy~v~~~d~R---G~g~~G~~~~ 544 (728)
....+..+.....+...|.. ++++.|+||++||. +.. ...|....+.|+.+ ++.+++|+-+ ...+.|..|+
T Consensus 42 ~~~~~~~~~~~l~y~~~p~~--~~~~~plVI~LHG~-G~~-~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wf 117 (285)
T 4fhz_A 42 DKAMADIMTRKLTFGRRGAA--PGEATSLVVFLHGY-GAD-GADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWF 117 (285)
T ss_dssp ------CCCCCCCEEEEESC--TTCCSEEEEEECCT-TBC-HHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESS
T ss_pred cccccccccccceeecCCCC--CCCCCcEEEEEcCC-CCC-HHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCccccc
Confidence 33444445444444555543 56778999999984 322 23344455667664 9999999843 2234567776
Q ss_pred cccccCC--C-------CCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhh
Q 004839 545 HDGRRTK--K-------LNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNT 615 (728)
Q Consensus 545 ~~~~~~~--~-------~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~ 615 (728)
....... . ....+++.+.++.++++..+|++||+++|+|+||++++.++.++|++|+++|+.+|.+...
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~-- 195 (285)
T 4fhz_A 118 PIPWLDGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAP-- 195 (285)
T ss_dssp CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCH--
T ss_pred ccccccCcccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCc--
Confidence 4211110 0 1123455666777777777899999999999999999999999999999999887732110
Q ss_pred ccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccE
Q 004839 616 LLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPI 695 (728)
Q Consensus 616 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~ 695 (728)
+.. .. .. ..+.|++++||..|++||+.++++++++|+++|++ ...
T Consensus 196 ----------------------~~~---~~------~~-~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~---~~~ 240 (285)
T 4fhz_A 196 ----------------------ERL---AE------EA-RSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFT---TYG 240 (285)
T ss_dssp ----------------------HHH---HH------HC-CCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCC---EEE
T ss_pred ----------------------hhh---hh------hh-hhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCC---EEE
Confidence 010 00 11 25789999999999999999999999999999853 122
Q ss_pred EEEcCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 004839 696 LLNLTTDIVEENRYLQCKESALETAFLIKMM 726 (728)
Q Consensus 696 ~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l 726 (728)
..|++.||+... +++....+||.++|
T Consensus 241 ~~y~g~gH~i~~-----~~l~~~~~fL~~~L 266 (285)
T 4fhz_A 241 HVMKGTGHGIAP-----DGLSVALAFLKERL 266 (285)
T ss_dssp EEETTCCSSCCH-----HHHHHHHHHHHHHC
T ss_pred EEECCCCCCCCH-----HHHHHHHHHHHHHC
Confidence 228999998632 23455779999987
No 79
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.74 E-value=2.7e-16 Score=163.53 Aligned_cols=133 Identities=20% Similarity=0.249 Sum_probs=103.4
Q ss_pred CceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCcc
Q 004839 464 FYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKW 543 (728)
Q Consensus 464 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~ 543 (728)
.+..+.+.+++ +|..+...++.+... ++..|+||++||..+.. ..|......|+++||.|+.+|+||+|.....
T Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~p~vv~~hG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~- 90 (315)
T 4f0j_A 17 AYPVHYLDFTS-QGQPLSMAYLDVAPK--KANGRTILLMHGKNFCA--GTWERTIDVLADAGYRVIAVDQVGFCKSSKP- 90 (315)
T ss_dssp SSCCEEEEEEE-TTEEEEEEEEEECCS--SCCSCEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCC-
T ss_pred CccceeEEEec-CCCCeeEEEeecCCC--CCCCCeEEEEcCCCCcc--hHHHHHHHHHHHCCCeEEEeecCCCCCCCCC-
Confidence 34566677765 666777665555432 34569999999976644 4578888999999999999999999975322
Q ss_pred ccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 544 HHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 544 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
.....+++|+.+.+..++++ .+.+++.++|+|+||++++.++.++|++++++|+.+|+.
T Consensus 91 ------~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 149 (315)
T 4f0j_A 91 ------AHYQYSFQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIG 149 (315)
T ss_dssp ------SSCCCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSC
T ss_pred ------CccccCHHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcc
Confidence 11245788888888888865 345689999999999999999999999999999999864
No 80
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.74 E-value=8.2e-17 Score=168.10 Aligned_cols=215 Identities=11% Similarity=0.036 Sum_probs=140.6
Q ss_pred EEEEEEE---CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCccc-HHHHHHHHHCCeEEEEEcCCCCCCCCCc
Q 004839 467 CEQYDVP---SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRW-RSELKSLLDRGWVVAFADVRGGGGGGKK 542 (728)
Q Consensus 467 ~~~~~~~---s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~-~~~~~~l~~~Gy~v~~~d~RG~g~~G~~ 542 (728)
...+.+. +.+|..+.++++.|++.. .+.|+||++||+.+.. ..| ......++++||.|+.+|+|+.+..+..
T Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~~P~~~~--~~~p~vv~lHG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~ 99 (304)
T 3d0k_A 24 RNAIPYLDDDRNADRPFTLNTYRPYGYT--PDRPVVVVQHGVLRNG--ADYRDFWIPAADRHKLLIVAPTFSDEIWPGVE 99 (304)
T ss_dssp EEEEEECC---CTTCCEEEEEEECTTCC--TTSCEEEEECCTTCCH--HHHHHHTHHHHHHHTCEEEEEECCTTTSCHHH
T ss_pred CceEEecccCCCCCceEEEEEEeCCCCC--CCCcEEEEeCCCCCCH--HHHHHHHHHHHHHCCcEEEEeCCccccCCCcc
Confidence 3346666 678899999999997642 3579999999986643 334 4456778889999999999965211111
Q ss_pred cccc--------cccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCC-ceeEEEEeC-Ccccc
Q 004839 543 WHHD--------GRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPD-LFRAVVLEV-PFLDA 612 (728)
Q Consensus 543 ~~~~--------~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~-~f~a~v~~~-p~~d~ 612 (728)
|+.. .........++|+.++++++.++..+|++||+|+|+|+||++++.++.++|+ +++++|+.. |+.++
T Consensus 100 ~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~~ 179 (304)
T 3d0k_A 100 SYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYTL 179 (304)
T ss_dssp HTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCCC
T ss_pred ccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCccccc
Confidence 1100 1111123456889999999998877899999999999999999999999995 788888555 66554
Q ss_pred hhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCC-----------------HHH
Q 004839 613 TNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFG-----------------VWE 675 (728)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp-----------------~~~ 675 (728)
.... . . ..++.... ..+|...... ++.|++++||+.|..+. ...
T Consensus 180 ~~~~----~----~--~~~~~~~~--------~~~~~~~~~~-~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~ 240 (304)
T 3d0k_A 180 PTFE----H----R--FPEGLDGV--------GLTEDHLARL-LAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYAR 240 (304)
T ss_dssp SSTT----S----B--TTTSSBTT--------TCCHHHHHHH-HHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHH
T ss_pred CCcc----c----c--CccccCCC--------CCCHHHHHhh-hcCCEEEEEeCCCCCccccccccChhhhccCccHHHH
Confidence 3210 0 0 01121110 1133322232 46799999999997642 466
Q ss_pred HHHHHHHHH----hCCCCCCCccEEEEcCCCCCC
Q 004839 676 AAKWVARVR----ESTIYDPKRPILLNLTTDIVE 705 (728)
Q Consensus 676 ~~~~~~~L~----~~~~~~~~~~~~~~~~~gH~~ 705 (728)
+.+++++++ +.+++. ...+..++++||.+
T Consensus 241 ~~~~~~~l~~~a~~~g~~~-~~~~~~~pg~gH~~ 273 (304)
T 3d0k_A 241 ARHYYEAGQRAAAQRGLPF-GWQLQVVPGIGHDG 273 (304)
T ss_dssp HHHHHHHHHHHHHHHTCCC-CCEEEEETTCCSCH
T ss_pred HHHHHHHHHHHHHhcCCCc-ceEEEEeCCCCCch
Confidence 778888886 556421 01233389999986
No 81
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.73 E-value=7.1e-18 Score=182.75 Aligned_cols=149 Identities=12% Similarity=0.087 Sum_probs=114.6
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcC------------cccH----HHHHHHHHCC
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLD------------KRWR----SELKSLLDRG 525 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~------------~~~~----~~~~~l~~~G 525 (728)
...+..+.+.+.+.||..|+++++.|++. .++.|+||++||..+.... ..|. ...+.|+++|
T Consensus 82 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G 159 (391)
T 3g8y_A 82 KEGYILEKWEFYPFPKSVSTFLVLKPEHL--KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEG 159 (391)
T ss_dssp ETTEEEEEEEECCSTTCCEEEEEEEETTC--CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTT
T ss_pred cCCEEEEEEEEEcCCCCEEEEEEEeCCCC--CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCC
Confidence 35678899999999999999999999764 4678999999996443210 1122 4678999999
Q ss_pred eEEEEEcCCCCCCCCCccccc--------cc----cCCCC----CcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHH
Q 004839 526 WVVAFADVRGGGGGGKKWHHD--------GR----RTKKL----NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLV 589 (728)
Q Consensus 526 y~v~~~d~RG~g~~G~~~~~~--------~~----~~~~~----~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~ 589 (728)
|+|+.+|+||+|+++..-... .. ...+. ....|+.+++++|.+++.+|++||+|+|+||||+++
T Consensus 160 ~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~a 239 (391)
T 3g8y_A 160 YVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPM 239 (391)
T ss_dssp CEEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHH
T ss_pred CEEEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHH
Confidence 999999999999876431110 00 00011 123789999999999999999999999999999999
Q ss_pred HHHHHhCCCceeEEEEeCCcccch
Q 004839 590 AAAINCCPDLFRAVVLEVPFLDAT 613 (728)
Q Consensus 590 ~~~~~~~p~~f~a~v~~~p~~d~~ 613 (728)
+.++.. +++++++|+.+++.++.
T Consensus 240 l~~a~~-~~~i~a~v~~~~~~~~~ 262 (391)
T 3g8y_A 240 MVLGVL-DKDIYAFVYNDFLCQTQ 262 (391)
T ss_dssp HHHHHH-CTTCCEEEEESCBCCHH
T ss_pred HHHHHc-CCceeEEEEccCCCCcc
Confidence 998886 56889999888887764
No 82
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.73 E-value=6.9e-17 Score=170.57 Aligned_cols=220 Identities=11% Similarity=-0.033 Sum_probs=145.1
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCC-CCcCcccHHHHHHHHH-CCeEEEEEcCCCCCCCCCccccccccCCCCCcHH
Q 004839 480 VPLTIIYSPKYKKENQNPGLLHGHGAYG-ELLDKRWRSELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIK 557 (728)
Q Consensus 480 i~~~l~~p~~~~~~~~~P~vv~~hGg~~-~~~~~~~~~~~~~l~~-~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~ 557 (728)
++++++.|.+ ++.|+||++|||.. ......|......|+. .||.|+.+|+||+++.. ....++
T Consensus 84 ~~~~~~~p~~----~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~-----------~~~~~~ 148 (326)
T 3d7r_A 84 MQVFRFNFRH----QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFH-----------IDDTFQ 148 (326)
T ss_dssp EEEEEEESTT----CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSC-----------HHHHHH
T ss_pred EEEEEEeeCC----CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCC-----------chHHHH
Confidence 5666777764 34699999999752 2233445566677774 69999999999977531 123689
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCc----eeEEEEeCCcccchhhccCCCCCCCcccccccCC
Q 004839 558 DFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDL----FRAVVLEVPFLDATNTLLYPILPLIAADYEEFGY 633 (728)
Q Consensus 558 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~----f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~ 633 (728)
|+.+++++++++ +++++|+++|+|+||.+++.++.++|++ ++++|+.+|+.++.... ... .. .......
T Consensus 149 d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~--~~~--~~-~~~~~~~ 221 (326)
T 3d7r_A 149 AIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSN--KDI--SD-ALIEQDA 221 (326)
T ss_dssp HHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCC--TTC--CH-HHHHHCS
T ss_pred HHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCC--hhH--Hh-hhcccCc
Confidence 999999999987 6889999999999999999999887776 99999999988764211 000 00 0000000
Q ss_pred CCCHHHH----HHHH--------ccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCC
Q 004839 634 PGDIDDF----HAIR--------NYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTT 701 (728)
Q Consensus 634 p~~~~~~----~~~~--------~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 701 (728)
....... +.+. ..+|+...-. .-.|+|+++|+.|. +..++.+++++|++.+.+ ..+.+++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~lii~G~~D~--~~~~~~~~~~~l~~~~~~---~~~~~~~g~ 295 (326)
T 3d7r_A 222 VLSQFGVNEIMKKWANGLPLTDKRISPINGTIE-GLPPVYMFGGGREM--THPDMKLFEQMMLQHHQY---IEFYDYPKM 295 (326)
T ss_dssp SCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCT-TCCCEEEEEETTST--THHHHHHHHHHHHHTTCC---EEEEEETTC
T ss_pred ccCHHHHHHHHHHhcCCCCCCCCeECcccCCcc-cCCCEEEEEeCccc--chHHHHHHHHHHHHCCCc---EEEEEeCCC
Confidence 0000011 1111 1244432222 23589999999995 566889999999988743 233338999
Q ss_pred CCCCCc--hhhhHHHHHHHHHHHHHhhc
Q 004839 702 DIVEEN--RYLQCKESALETAFLIKMME 727 (728)
Q Consensus 702 gH~~~~--~~~~~~~~~~~~afl~~~l~ 727 (728)
||++.. .+...+....+.+||.++|.
T Consensus 296 ~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 296 VHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp CTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred cccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 998644 23444456667899987763
No 83
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.73 E-value=4.1e-16 Score=152.09 Aligned_cols=193 Identities=13% Similarity=0.097 Sum_probs=140.0
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHH--HHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRS--ELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKK 552 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~--~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~ 552 (728)
.||.+++++++.+.+ +.|+||++||+.+.. ..|.. ....|+++||.|+.+|+||+|.... . ... ..
T Consensus 11 ~~g~~l~~~~~~~~~-----~~~~vv~~hG~~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~---~-~~~-~~ 78 (207)
T 3bdi_A 11 VNGTRVFQRKMVTDS-----NRRSIALFHGYSFTS--MDWDKADLFNNYSKIGYNVYAPDYPGFGRSAS---S-EKY-GI 78 (207)
T ss_dssp ETTEEEEEEEECCTT-----CCEEEEEECCTTCCG--GGGGGGTHHHHHHTTTEEEEEECCTTSTTSCC---C-TTT-CC
T ss_pred eCCcEEEEEEEeccC-----CCCeEEEECCCCCCc--cccchHHHHHHHHhCCCeEEEEcCCcccccCc---c-cCC-CC
Confidence 489999998887764 468999999986644 45666 7889999999999999999886410 0 001 11
Q ss_pred CC-cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCccccccc
Q 004839 553 LN-SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEF 631 (728)
Q Consensus 553 ~~-~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~ 631 (728)
.. .++|+.+.+..++++- +.++++++|+|+||.+++.++.++|++++++|+.+|.... . +
T Consensus 79 ~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~-~----------------~ 139 (207)
T 3bdi_A 79 DRGDLKHAAEFIRDYLKAN--GVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE-S----------------L 139 (207)
T ss_dssp TTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCG-G----------------G
T ss_pred CcchHHHHHHHHHHHHHHc--CCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCcccc-c----------------h
Confidence 22 7888888888888653 4579999999999999999999999999999999885211 0 0
Q ss_pred CCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhh
Q 004839 632 GYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQ 711 (728)
Q Consensus 632 g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 711 (728)
...+.+ ++.|+++++|..|..|++..+.++.+.+.. ..+..++++||.... ...
T Consensus 140 -----------------~~~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~-------~~~~~~~~~~H~~~~-~~~ 193 (207)
T 3bdi_A 140 -----------------KGDMKK-IRQKTLLVWGSKDHVVPIALSKEYASIISG-------SRLEIVEGSGHPVYI-EKP 193 (207)
T ss_dssp -----------------HHHHTT-CCSCEEEEEETTCTTTTHHHHHHHHHHSTT-------CEEEEETTCCSCHHH-HSH
T ss_pred -----------------hHHHhh-ccCCEEEEEECCCCccchHHHHHHHHhcCC-------ceEEEeCCCCCCccc-cCH
Confidence 111233 678999999999999999999999888742 233337899997532 111
Q ss_pred HHHHHHHHHHHHH
Q 004839 712 CKESALETAFLIK 724 (728)
Q Consensus 712 ~~~~~~~~afl~~ 724 (728)
.+......+||.+
T Consensus 194 ~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 194 EEFVRITVDFLRN 206 (207)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh
Confidence 2223345667653
No 84
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.73 E-value=8.3e-17 Score=166.05 Aligned_cols=237 Identities=14% Similarity=0.082 Sum_probs=151.8
Q ss_pred ceEEEEEEECC-CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHH---HHHHHHHCCeEEEEEcCCCCCCCC
Q 004839 465 YSCEQYDVPSH-DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRS---ELKSLLDRGWVVAFADVRGGGGGG 540 (728)
Q Consensus 465 ~~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~~~~l~~~Gy~v~~~d~RG~g~~G 540 (728)
...+.+++.|. +|.+++++ +.|++ .|+||++||+........|.. ..+.++++|++|+++|.++++.|.
T Consensus 9 ~~~~~~~~~S~~~~~~~~~~-~~P~~------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~ 81 (280)
T 1r88_A 9 APYENLMVPSPSMGRDIPVA-FLAGG------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYT 81 (280)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTS
T ss_pred CCEEEEEEECcccCCcceEE-EeCCC------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccC
Confidence 45667788775 68899988 67764 289999999853222234433 346677889999999998765442
Q ss_pred CccccccccCCCCCcHHHHH--HHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccC
Q 004839 541 KKWHHDGRRTKKLNSIKDFI--SCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLY 618 (728)
Q Consensus 541 ~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~ 618 (728)
.|..... ..+.+++ +.+.++.++--+|+++++|+|+||||++++.++.++|++|+++|+.+|.+++......
T Consensus 82 -~~~~~~~-----~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~ 155 (280)
T 1r88_A 82 -NWEQDGS-----KQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTN 155 (280)
T ss_dssp -BCSSCTT-----CBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHH
T ss_pred -CCCCCCC-----CcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccch
Confidence 2222111 1343332 2344444434468899999999999999999999999999999999998875431100
Q ss_pred CCCC-----C-CcccccccCCCCCHHHHHHHHccCcccccccC--CCCCeEEEE----cCCCCC-------CCHHHHHHH
Q 004839 619 PILP-----L-IAADYEEFGYPGDIDDFHAIRNYSPYDNIQKD--VLYPAVLVT----SSFNTR-------FGVWEAAKW 679 (728)
Q Consensus 619 ~~~~-----~-~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~--~~~P~lli~----g~~D~~-------Vp~~~~~~~ 679 (728)
.... . .......||.+.. +.+.+.+|+.++.+. ...|+++++ |..|.+ |++.+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~ 231 (280)
T 1r88_A 156 GAIAAGMQQFGGVDTNGMWGAPQL----GRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMF 231 (280)
T ss_dssp HHHHHHHHHHHCCCTHHHHCCGGG----STTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHH
T ss_pred hhHHHHhhhccccchhhhcCCCch----hhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHH
Confidence 0000 0 0001112444421 235667888766541 256777888 777764 699999999
Q ss_pred HHHHHhCC-CCCCCccEEE--EcCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 004839 680 VARVREST-IYDPKRPILL--NLTTDIVEENRYLQCKESALETAFLIKMM 726 (728)
Q Consensus 680 ~~~L~~~~-~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~afl~~~l 726 (728)
+++|++.| ++ +.+ +++++|....-... ....+.||.+.|
T Consensus 232 ~~~L~~~g~~~-----~~~~~~~~g~H~~~~w~~~---l~~~l~~~~~~~ 273 (280)
T 1r88_A 232 YNQYRSVGGHN-----GHFDFPASGDNGWGSWAPQ---LGAMSGDIVGAI 273 (280)
T ss_dssp HHHHHHTTCCS-----EEEECCSSCCSSHHHHHHH---HHHHHHHHHHHH
T ss_pred HHHHHHCCCcc-----eEEEecCCCCcChhHHHHH---HHHHHHHHHHHH
Confidence 99999987 53 344 57889975432222 334556776654
No 85
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.72 E-value=1.3e-16 Score=158.70 Aligned_cols=202 Identities=9% Similarity=0.026 Sum_probs=133.4
Q ss_pred EEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCC------Ccccc-cc---ccCCCC
Q 004839 484 IIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGG------KKWHH-DG---RRTKKL 553 (728)
Q Consensus 484 l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G------~~~~~-~~---~~~~~~ 553 (728)
++.|+. +++.|+||++||..+.. ..|......|+++||.|+++|.+|.+... ..|++ .+ ......
T Consensus 14 ~~~p~~---~~~~~~vv~lHG~~~~~--~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~~ 88 (232)
T 1fj2_A 14 AIVPAA---RKATAAVIFLHGLGDTG--HGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDE 88 (232)
T ss_dssp EEECCS---SCCSEEEEEECCSSSCH--HHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCH
T ss_pred cccCCC---CCCCceEEEEecCCCcc--chHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCCccccccc
Confidence 455653 24679999999976533 34666667777789999999555421100 00000 00 000011
Q ss_pred Cc----HHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCccccc
Q 004839 554 NS----IKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYE 629 (728)
Q Consensus 554 ~~----~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~ 629 (728)
.. .+|+.+.++++.+ ..+|+++++++|+|+||++++.++.++|++++++|+.+|..+.....
T Consensus 89 ~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~------------- 154 (232)
T 1fj2_A 89 SGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF------------- 154 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS-------------
T ss_pred HHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc-------------
Confidence 12 3444555555554 45688999999999999999999999999999999999976643211
Q ss_pred ccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchh
Q 004839 630 EFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRY 709 (728)
Q Consensus 630 ~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~ 709 (728)
+. ....+.. ++.|+|+++|+.|..||+.++.++++.|++.+.+. ...+..++++||....
T Consensus 155 ----~~------------~~~~~~~-~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~H~~~~-- 214 (232)
T 1fj2_A 155 ----PQ------------GPIGGAN-RDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPA-NVTFKTYEGMMHSSCQ-- 214 (232)
T ss_dssp ----CS------------SCCCSTT-TTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGG-GEEEEEETTCCSSCCH--
T ss_pred ----cc------------ccccccc-CCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCC-ceEEEEeCCCCcccCH--
Confidence 00 0112333 78899999999999999999999999999866310 0122237899998722
Q ss_pred hhHHHHHHHHHHHHHhhc
Q 004839 710 LQCKESALETAFLIKMME 727 (728)
Q Consensus 710 ~~~~~~~~~~afl~~~l~ 727 (728)
+......+||.++|.
T Consensus 215 ---~~~~~i~~~l~~~l~ 229 (232)
T 1fj2_A 215 ---QEMMDVKQFIDKLLP 229 (232)
T ss_dssp ---HHHHHHHHHHHHHSC
T ss_pred ---HHHHHHHHHHHHhcC
Confidence 223557899998874
No 86
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.72 E-value=1.1e-17 Score=181.61 Aligned_cols=149 Identities=11% Similarity=0.117 Sum_probs=114.6
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCc------------CcccH----HHHHHHHHCC
Q 004839 462 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELL------------DKRWR----SELKSLLDRG 525 (728)
Q Consensus 462 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~------------~~~~~----~~~~~l~~~G 525 (728)
...+..+.+.+.+.||..++++++.|++. .++.|+||++||+.+... ...|. ...+.|+++|
T Consensus 87 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~G 164 (398)
T 3nuz_A 87 REGYRLEKWEFYPLPKCVSTFLVLIPDNI--NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEG 164 (398)
T ss_dssp CSSEEEEEEEECCSTTBCEEEEEEEESSC--CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTT
T ss_pred cCCEEEEEEEEEcCCCcEEEEEEEeCCCC--CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCC
Confidence 45688999999999999999999999864 467899999999755321 01122 4678999999
Q ss_pred eEEEEEcCCCCCCCCCcccccc----------------ccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHH
Q 004839 526 WVVAFADVRGGGGGGKKWHHDG----------------RRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLV 589 (728)
Q Consensus 526 y~v~~~d~RG~g~~G~~~~~~~----------------~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~ 589 (728)
|+|+.+|+||+|+.+....... ..........|+.++++||.+++.+|++||+|+|+||||+++
T Consensus 165 y~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a 244 (398)
T 3nuz_A 165 YIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPM 244 (398)
T ss_dssp CEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHH
T ss_pred CEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHH
Confidence 9999999999998765431100 000111134799999999999999999999999999999999
Q ss_pred HHHHHhCCCceeEEEEeCCcccch
Q 004839 590 AAAINCCPDLFRAVVLEVPFLDAT 613 (728)
Q Consensus 590 ~~~~~~~p~~f~a~v~~~p~~d~~ 613 (728)
+.++.. +++++|+|+.+++..+.
T Consensus 245 ~~~aa~-~~~i~a~v~~~~~~~~~ 267 (398)
T 3nuz_A 245 MVLGTL-DTSIYAFVYNDFLCQTQ 267 (398)
T ss_dssp HHHHHH-CTTCCEEEEESCBCCHH
T ss_pred HHHHhc-CCcEEEEEEecccccch
Confidence 998886 56788999877765544
No 87
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.72 E-value=6.6e-17 Score=163.53 Aligned_cols=182 Identities=14% Similarity=0.112 Sum_probs=131.5
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEE--cCCCCCCCCCcccccc-ccCCC----CCcHHHHHHHHHHH
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFA--DVRGGGGGGKKWHHDG-RRTKK----LNSIKDFISCARFL 566 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~--d~RG~g~~G~~~~~~~-~~~~~----~~~~~D~~~~~~~l 566 (728)
++.|+||++||+.+.. ..|......|++ +|.|+.+ |+||+|++ .|.... ..... ....+|+.+.++++
T Consensus 60 ~~~p~vv~~HG~~~~~--~~~~~~~~~l~~-~~~v~~~~~d~~g~g~s--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 134 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDE--NQFFDFGARLLP-QATILSPVGDVSEHGAA--RFFRRTGEGVYDMVDLERATGKMADFIKAN 134 (251)
T ss_dssp TTSCEEEEECCTTCCH--HHHHHHHHHHST-TSEEEEECCSEEETTEE--ESSCBCGGGCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCH--hHHHHHHHhcCC-CceEEEecCCcCCCCCc--ccccCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 4579999999976543 455666677766 5999999 78888754 222211 11111 11356777777777
Q ss_pred HHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHcc
Q 004839 567 IEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNY 646 (728)
Q Consensus 567 ~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~ 646 (728)
.++. +.++++++|+|+||++++.++.++|++++++|+.+|+.+...
T Consensus 135 ~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-------------------------------- 180 (251)
T 2r8b_A 135 REHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-------------------------------- 180 (251)
T ss_dssp HHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC--------------------------------
T ss_pred Hhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc--------------------------------
Confidence 7654 778999999999999999999999999999999999764321
Q ss_pred CcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEE-EEcCCCCCCCchhhhHHHHHHHHHHHHHh
Q 004839 647 SPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPIL-LNLTTDIVEENRYLQCKESALETAFLIKM 725 (728)
Q Consensus 647 sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~-~~~~~gH~~~~~~~~~~~~~~~~afl~~~ 725 (728)
.+ ... .++.|+|+++|+.|..||+.++.+++++|+++++ .+. ..+++||+... +......+||.++
T Consensus 181 ~~--~~~-~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~gH~~~~-----~~~~~~~~~l~~~ 247 (251)
T 2r8b_A 181 KI--SPA-KPTRRVLITAGERDPICPVQLTKALEESLKAQGG-----TVETVWHPGGHEIRS-----GEIDAVRGFLAAY 247 (251)
T ss_dssp CC--CCC-CTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSS-----EEEEEEESSCSSCCH-----HHHHHHHHHHGGG
T ss_pred cc--ccc-ccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCC-----eEEEEecCCCCccCH-----HHHHHHHHHHHHh
Confidence 00 112 2578999999999999999999999999997663 344 36778998732 2235567999988
Q ss_pred hc
Q 004839 726 ME 727 (728)
Q Consensus 726 l~ 727 (728)
|+
T Consensus 248 l~ 249 (251)
T 2r8b_A 248 GG 249 (251)
T ss_dssp C-
T ss_pred cC
Confidence 75
No 88
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.72 E-value=1.1e-16 Score=173.92 Aligned_cols=153 Identities=16% Similarity=0.112 Sum_probs=107.2
Q ss_pred CCCceEEEEEEECCC--C--cEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcC---------cccHHHHHHHHHCCeEE
Q 004839 462 SEFYSCEQYDVPSHD--G--ISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLD---------KRWRSELKSLLDRGWVV 528 (728)
Q Consensus 462 ~~~~~~~~~~~~s~d--G--~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~---------~~~~~~~~~l~~~Gy~v 528 (728)
...+...++.+.+.+ | ..+.++++.|.+....++.|+||++||+.+.... ..|....+.|+++||+|
T Consensus 41 ~~~v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V 120 (397)
T 3h2g_A 41 KCNVRVAEFTYATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVV 120 (397)
T ss_dssp CSEEEEEEEEEEEECTTSCEEEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEE
T ss_pred cCCeEEEEEEEEecCCCCCeEEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEE
Confidence 345677788887665 5 3588999999876556788999999997765432 12556778899999999
Q ss_pred EEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHc-CCCCCCcEEEEEeCccHHHHHHHHHh-CC----C-cee
Q 004839 529 AFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEK-EIVKEHKLAGWGYSAGGLLVAAAINC-CP----D-LFR 601 (728)
Q Consensus 529 ~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~-~p----~-~f~ 601 (728)
+.+|+||+|.++...............+.|.+.++..+.++ +..|+++|+++|||+||+++++++.. .+ + .+.
T Consensus 121 ~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~ 200 (397)
T 3h2g_A 121 VGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLV 200 (397)
T ss_dssp EEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEE
T ss_pred EEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceE
Confidence 99999999976432211110000012455666666666654 66678999999999999999887622 22 2 688
Q ss_pred EEEEeCCcccchh
Q 004839 602 AVVLEVPFLDATN 614 (728)
Q Consensus 602 a~v~~~p~~d~~~ 614 (728)
++++.++..|+..
T Consensus 201 ~~~~~~~~~~l~~ 213 (397)
T 3h2g_A 201 ASAPISGPYALEQ 213 (397)
T ss_dssp EEEEESCCSSHHH
T ss_pred EEecccccccHHH
Confidence 8898888888753
No 89
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.72 E-value=3e-16 Score=155.91 Aligned_cols=191 Identities=10% Similarity=0.027 Sum_probs=132.6
Q ss_pred CCCCccEEEEEcCCCCCCcCcccHHHHHHHHH--CCeEEEEEcCCCCC------CCCCccccc-ccc---CCCCCcHHHH
Q 004839 492 KENQNPGLLHGHGAYGELLDKRWRSELKSLLD--RGWVVAFADVRGGG------GGGKKWHHD-GRR---TKKLNSIKDF 559 (728)
Q Consensus 492 ~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~--~Gy~v~~~d~RG~g------~~G~~~~~~-~~~---~~~~~~~~D~ 559 (728)
.+++.|+||++||..+.. ..|......|++ +||.|+++|+||++ ..+..|.+. +.+ ......+++.
T Consensus 20 ~~~~~~~vv~lHG~~~~~--~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~ 97 (226)
T 3cn9_A 20 APNADACIIWLHGLGADR--TDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNAS 97 (226)
T ss_dssp CTTCCEEEEEECCTTCCG--GGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHHH
T ss_pred CCCCCCEEEEEecCCCCh--HHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHHHH
Confidence 345679999999976543 457778888988 99999999988532 112222211 111 1112234444
Q ss_pred HHHHHHHHHc---CCCCCCcEEEEEeCccHHHHHHHHH-hCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCC
Q 004839 560 ISCARFLIEK---EIVKEHKLAGWGYSAGGLLVAAAIN-CCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPG 635 (728)
Q Consensus 560 ~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~-~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~ 635 (728)
.+.+..+++. ..+++++|+++|+|+||.+++.++. ++|++++++|+.+|+.+....+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~------------------- 158 (226)
T 3cn9_A 98 ADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL------------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC-------------------
T ss_pred HHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh-------------------
Confidence 4444444433 2468889999999999999999999 9999999999999976643211
Q ss_pred CHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHH
Q 004839 636 DIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKES 715 (728)
Q Consensus 636 ~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 715 (728)
.+.+ .. ++.|+|+++|..|..||+.++.++++.++..+.+ ..+..++ +||..... ..
T Consensus 159 ---------~~~~----~~-~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~---~~~~~~~-~gH~~~~~-----~~ 215 (226)
T 3cn9_A 159 ---------ALDE----RH-KRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVE---VGWHDYP-MGHEVSLE-----EI 215 (226)
T ss_dssp ---------CCCT----GG-GGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCC---EEEEEES-CCSSCCHH-----HH
T ss_pred ---------hhcc----cc-cCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCc---eeEEEec-CCCCcchh-----hH
Confidence 0011 22 6789999999999999999999999999987643 2333378 99986332 23
Q ss_pred HHHHHHHHHhh
Q 004839 716 ALETAFLIKMM 726 (728)
Q Consensus 716 ~~~~afl~~~l 726 (728)
....+||.++|
T Consensus 216 ~~i~~~l~~~l 226 (226)
T 3cn9_A 216 HDIGAWLRKRL 226 (226)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhC
Confidence 44678998775
No 90
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.72 E-value=1.9e-17 Score=169.99 Aligned_cols=195 Identities=10% Similarity=0.025 Sum_probs=132.5
Q ss_pred CCCccEEEEEcCCCCC---CcCcccHHHHHHH----HHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHH
Q 004839 493 ENQNPGLLHGHGAYGE---LLDKRWRSELKSL----LDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARF 565 (728)
Q Consensus 493 ~~~~P~vv~~hGg~~~---~~~~~~~~~~~~l----~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~ 565 (728)
.++.|+||++|||... .....|....+.| +++||.|+.+|+|++++.. ....++|+.+++++
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~-----------~~~~~~d~~~~~~~ 106 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT-----------NPRNLYDAVSNITR 106 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-----------TTHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCC-----------CCcHHHHHHHHHHH
Confidence 3567999999996422 2334567777778 5799999999999876421 12467899999999
Q ss_pred HHHcCCCCCCcEEEEEeCccHHHHHHHHHhC-----------------CCceeEEEEeCCcccchhhccCCCCCCCcccc
Q 004839 566 LIEKEIVKEHKLAGWGYSAGGLLVAAAINCC-----------------PDLFRAVVLEVPFLDATNTLLYPILPLIAADY 628 (728)
Q Consensus 566 l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-----------------p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~ 628 (728)
++++ .++++++++|+|+||++++.++.++ |++++++|+.+|+.++........ .......
T Consensus 107 l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~-~~~~~~~ 183 (273)
T 1vkh_A 107 LVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYP-EYDCFTR 183 (273)
T ss_dssp HHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCG-GGHHHHH
T ss_pred HHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcc-cHHHHHH
Confidence 9976 5778999999999999999999875 789999999999887754321100 0000000
Q ss_pred cccCCCCCHHHHH-HHHccCccc--ccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCC
Q 004839 629 EEFGYPGDIDDFH-AIRNYSPYD--NIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVE 705 (728)
Q Consensus 629 ~~~g~p~~~~~~~-~~~~~sP~~--~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 705 (728)
..++... +.+. .....+|+. .... ++.|+|+++|+.|..||+.++.+++++|+..+.+ ..+.+++++||..
T Consensus 184 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~---~~~~~~~~~gH~~ 257 (273)
T 1vkh_A 184 LAFPDGI--QMYEEEPSRVMPYVKKALSR-FSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLS---FKLYLDDLGLHND 257 (273)
T ss_dssp HHCTTCG--GGCCCCHHHHHHHHHHHHHH-HTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCC---EEEEEECCCSGGG
T ss_pred HHhcccc--cchhhcccccChhhhhcccc-cCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCc---eEEEEeCCCcccc
Confidence 0011100 0000 011112211 1122 5789999999999999999999999999988743 2333378999985
Q ss_pred Cc
Q 004839 706 EN 707 (728)
Q Consensus 706 ~~ 707 (728)
..
T Consensus 258 ~~ 259 (273)
T 1vkh_A 258 VY 259 (273)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 91
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.72 E-value=6.2e-17 Score=162.39 Aligned_cols=217 Identities=14% Similarity=0.093 Sum_probs=140.0
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCC-CccccccccCCCCCcHHHHHHHHHHHHHcCCC
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGG-KKWHHDGRRTKKLNSIKDFISCARFLIEKEIV 572 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G-~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 572 (728)
++.|+||++||..+.. ..|......|+++||.|+.+|+||+|.+. ...... .......+|+.++++++.++
T Consensus 20 ~~~~~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~---~~~~~~~~d~~~~i~~l~~~--- 91 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGSP--NDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTK---GNPDIWWAESSAAVAHMTAK--- 91 (251)
T ss_dssp CSSEEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHH---CCHHHHHHHHHHHHHHHHTT---
T ss_pred CCCceEEEeCCCCCCH--HHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCc---ccHHHHHHHHHHHHHHHHHh---
Confidence 3458899999976544 46778889999999999999999999752 211110 01112357777888888765
Q ss_pred CCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHH--------HHHHHH
Q 004839 573 KEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDID--------DFHAIR 644 (728)
Q Consensus 573 d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~--------~~~~~~ 644 (728)
.++++++|+|+||++++.++.++|++++++|+.+|+.............+........+...... ....+.
T Consensus 92 -~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (251)
T 3dkr_A 92 -YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAAID 170 (251)
T ss_dssp -CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred -cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHHhhhHHHHHHHH
Confidence 57999999999999999999999999999999999876321100000000000000001100000 011111
Q ss_pred cc--CcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHh-CCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHH
Q 004839 645 NY--SPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRE-STIYDPKRPILLNLTTDIVEENRYLQCKESALETAF 721 (728)
Q Consensus 645 ~~--sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~af 721 (728)
.. .+...+.+ ++.|+|+++|..|..||+.++.++++++.. .. ..+..++++||......+..+......+|
T Consensus 171 ~~~~~~~~~~~~-~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 244 (251)
T 3dkr_A 171 QFATTVAADLNL-VKQPTFIGQAGQDELVDGRLAYQLRDALINAAR-----VDFHWYDDAKHVITVNSAHHALEEDVIAF 244 (251)
T ss_dssp HHHHHHHHTGGG-CCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSC-----EEEEEETTCCSCTTTSTTHHHHHHHHHHH
T ss_pred HHHHHHhccccc-cCCCEEEEecCCCcccChHHHHHHHHHhcCCCC-----ceEEEeCCCCcccccccchhHHHHHHHHH
Confidence 11 12334555 789999999999999999999999999987 33 23333799999865432233335556788
Q ss_pred HHHh
Q 004839 722 LIKM 725 (728)
Q Consensus 722 l~~~ 725 (728)
|.+.
T Consensus 245 l~~~ 248 (251)
T 3dkr_A 245 MQQE 248 (251)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 8764
No 92
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.72 E-value=1.8e-16 Score=156.14 Aligned_cols=191 Identities=11% Similarity=0.030 Sum_probs=131.1
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHH--CCeEEEEEcCCC------CCCCCCccccc-ccc---CCCCCcHHHHHH
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLD--RGWVVAFADVRG------GGGGGKKWHHD-GRR---TKKLNSIKDFIS 561 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~--~Gy~v~~~d~RG------~g~~G~~~~~~-~~~---~~~~~~~~D~~~ 561 (728)
++.|+||++||..+.. ..|......|++ +||.|+.+|.+| +|..+..|++. +.+ ......+++..+
T Consensus 12 ~~~~~vv~~HG~~~~~--~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~~ 89 (218)
T 1auo_A 12 PADACVIWLHGLGADR--YDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAK 89 (218)
T ss_dssp CCSEEEEEECCTTCCT--TTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHH
T ss_pred CCCcEEEEEecCCCCh--hhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHHHHH
Confidence 5679999999976543 457778888988 999999999874 22222333221 111 011123444444
Q ss_pred HHHHHHHc---CCCCCCcEEEEEeCccHHHHHHHHH-hCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCH
Q 004839 562 CARFLIEK---EIVKEHKLAGWGYSAGGLLVAAAIN-CCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDI 637 (728)
Q Consensus 562 ~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~-~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~ 637 (728)
.+..+++. ..+++++++++|+|+||++++.++. ++|++++++|+.+|..+. ..++ ...
T Consensus 90 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~------~~~~----------~~~-- 151 (218)
T 1auo_A 90 MVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT------FGDE----------LEL-- 151 (218)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT------CCTT----------CCC--
T ss_pred HHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC------chhh----------hhh--
Confidence 44444332 2468899999999999999999999 999999999999997654 0000 000
Q ss_pred HHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHH
Q 004839 638 DDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESAL 717 (728)
Q Consensus 638 ~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 717 (728)
.... ++.|+|+++|+.|..||+.+++++++.++..+.+ ..+..++ +||.... +....
T Consensus 152 -------------~~~~-~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~---~~~~~~~-~gH~~~~-----~~~~~ 208 (218)
T 1auo_A 152 -------------SASQ-QRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVT---VTWQEYP-MGHEVLP-----QEIHD 208 (218)
T ss_dssp -------------CHHH-HTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCC---EEEEEES-CSSSCCH-----HHHHH
T ss_pred -------------hhcc-cCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCc---eEEEEec-CCCccCH-----HHHHH
Confidence 0122 5789999999999999999999999999987643 2333378 9998633 22345
Q ss_pred HHHHHHHhhc
Q 004839 718 ETAFLIKMME 727 (728)
Q Consensus 718 ~~afl~~~l~ 727 (728)
..+||.++|.
T Consensus 209 ~~~~l~~~l~ 218 (218)
T 1auo_A 209 IGAWLAARLG 218 (218)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 6789988763
No 93
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.72 E-value=1.9e-16 Score=165.42 Aligned_cols=222 Identities=13% Similarity=0.050 Sum_probs=137.5
Q ss_pred EEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCC-CCCCCcccc
Q 004839 467 CEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGG-GGGGKKWHH 545 (728)
Q Consensus 467 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~-g~~G~~~~~ 545 (728)
++...+.+.||.+|+++...|.+. ..++.|+||++||..+.. ..|...+..|+++||.|+.+|+||+ |.+.....
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~-~~~~~~~VvllHG~g~~~--~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~- 82 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKEN-VPFKNNTILIASGFARRM--DHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSID- 82 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGGG--GGGHHHHHHHHTTTCCEEEECCCBCC---------
T ss_pred ceEEEEEcCCCCEEEEEEecCccc-CCCCCCEEEEecCCccCc--hHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCccc-
Confidence 345567888999999887766532 122458899999965433 4678888999999999999999998 75432110
Q ss_pred ccccCCC-CCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc---cCCCC
Q 004839 546 DGRRTKK-LNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL---LYPIL 621 (728)
Q Consensus 546 ~~~~~~~-~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~---~~~~~ 621 (728)
... ....+|+.+++++|.+.+ .++++++|+||||.+++.++.+ | +++++|+.+|+.++.... .....
T Consensus 83 ----~~~~~~~~~D~~~~~~~l~~~~---~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~~ 153 (305)
T 1tht_A 83 ----EFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFDY 153 (305)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSCG
T ss_pred ----ceehHHHHHHHHHHHHHHHhCC---CCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhhh
Confidence 111 112466777778776433 4689999999999999999987 7 889999988876543211 00000
Q ss_pred -CCCccccc---cc-CCCCCHH-HHHHHHcc------CcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCC
Q 004839 622 -PLIAADYE---EF-GYPGDID-DFHAIRNY------SPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIY 689 (728)
Q Consensus 622 -~~~~~~~~---~~-g~p~~~~-~~~~~~~~------sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~ 689 (728)
........ .+ +...... ........ ++...+.+ ++.|+|+|+|..|..||+..+.++++++...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~-- 230 (305)
T 1tht_A 154 LSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVAN-TSVPLIAFTANNDDWVKQEEVYDMLAHIRTGH-- 230 (305)
T ss_dssp GGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTT-CCSCEEEEEETTCTTSCHHHHHHHHTTCTTCC--
T ss_pred hhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhh-cCCCEEEEEeCCCCccCHHHHHHHHHhcCCCC--
Confidence 00000000 00 0000001 11111111 11233454 89999999999999999999998887765333
Q ss_pred CCCccEEEEcCCCCCCCc
Q 004839 690 DPKRPILLNLTTDIVEEN 707 (728)
Q Consensus 690 ~~~~~~~~~~~~gH~~~~ 707 (728)
..+.+++++||....
T Consensus 231 ---~~l~~i~~agH~~~e 245 (305)
T 1tht_A 231 ---CKLYSLLGSSHDLGE 245 (305)
T ss_dssp ---EEEEEETTCCSCTTS
T ss_pred ---cEEEEeCCCCCchhh
Confidence 233337999998644
No 94
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.70 E-value=2.9e-16 Score=157.37 Aligned_cols=193 Identities=13% Similarity=0.143 Sum_probs=133.3
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHHC-----CeEEEEEcCCCC------CCCCCccccc-cccCC---CCCcHHH
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLDR-----GWVVAFADVRGG------GGGGKKWHHD-GRRTK---KLNSIKD 558 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~-----Gy~v~~~d~RG~------g~~G~~~~~~-~~~~~---~~~~~~D 558 (728)
++.|+||++||..+.. ..|......|+.+ ||.|++++.++. +..+..|+.. +.... ....+++
T Consensus 21 ~~~p~vv~lHG~g~~~--~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 98 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSG--QGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDV 98 (239)
T ss_dssp CCCEEEEEECCTTCCH--HHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHH
T ss_pred CCCcEEEEEecCCCch--hhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHH
Confidence 4679999999965432 3456666777765 799999998653 3334445431 11111 1124555
Q ss_pred HHHHHHHHHHc---CCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCC
Q 004839 559 FISCARFLIEK---EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPG 635 (728)
Q Consensus 559 ~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~ 635 (728)
+.+.+..++++ ..+++++++++|+|+||++++.++.++|++++++|+.+|+.+....
T Consensus 99 ~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-------------------- 158 (239)
T 3u0v_A 99 MCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA-------------------- 158 (239)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH--------------------
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH--------------------
Confidence 55555555543 3468899999999999999999999999999999999986653210
Q ss_pred CHHHHHHHHccCcccccccCCCCC-eEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHH
Q 004839 636 DIDDFHAIRNYSPYDNIQKDVLYP-AVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKE 714 (728)
Q Consensus 636 ~~~~~~~~~~~sP~~~i~~~~~~P-~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 714 (728)
....+. .. ....| +|+++|..|..||+.++.+++++|++.+.+ ..+.+++++||.... +.
T Consensus 159 ---~~~~~~-------~~-~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~---~~~~~~~g~~H~~~~-----~~ 219 (239)
T 3u0v_A 159 ---VYQALQ-------KS-NGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVT---TKFHSFPNVYHELSK-----TE 219 (239)
T ss_dssp ---HHHHHH-------HC-CSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCC---EEEEEETTCCSSCCH-----HH
T ss_pred ---HHHHHH-------hh-ccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCc---EEEEEeCCCCCcCCH-----HH
Confidence 111111 11 24667 999999999999999999999999988743 233338899998752 33
Q ss_pred HHHHHHHHHHhhc
Q 004839 715 SALETAFLIKMME 727 (728)
Q Consensus 715 ~~~~~afl~~~l~ 727 (728)
.....+||.++|.
T Consensus 220 ~~~~~~~l~~~l~ 232 (239)
T 3u0v_A 220 LDILKLWILTKLP 232 (239)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhCC
Confidence 4556789988773
No 95
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.70 E-value=3.4e-16 Score=148.84 Aligned_cols=174 Identities=13% Similarity=0.067 Sum_probs=122.5
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCC
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 573 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 573 (728)
++.|+||++||..+......+......|+++||.|+.+|+||.|.... . .......+++.+.++++.+.. +
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~------~-~~~~~~~~~~~~~~~~~~~~~--~ 72 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRD------L-GQLGDVRGRLQRLLEIARAAT--E 72 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGG------G-CTTCCHHHHHHHHHHHHHHHH--T
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCC------C-CCCCCHHHHHHHHHHHHHhcC--C
Confidence 356899999997665433334467788999999999999999876421 1 111122344455566666543 4
Q ss_pred CCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccc
Q 004839 574 EHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQ 653 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~ 653 (728)
.++++++|+|+||.+++.++.++| ++++|+.+|..+.... +. +.
T Consensus 73 ~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~------------------~~----------------~~ 116 (176)
T 2qjw_A 73 KGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL------------------PA----------------LD 116 (176)
T ss_dssp TSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB------------------CC----------------CC
T ss_pred CCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc------------------Cc----------------cc
Confidence 579999999999999999999888 9999999987654210 00 23
Q ss_pred cCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHH
Q 004839 654 KDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIK 724 (728)
Q Consensus 654 ~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~ 724 (728)
. ++.|+++++|..|..||+.++.++++.+ + ..+.++ ++||....... +......+||.+
T Consensus 117 ~-~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~-----~~~~~~-~~~H~~~~~~~--~~~~~i~~fl~~ 175 (176)
T 2qjw_A 117 A-AAVPISIVHAWHDELIPAADVIAWAQAR---S-----ARLLLV-DDGHRLGAHVQ--AASRAFAELLQS 175 (176)
T ss_dssp C-CSSCEEEEEETTCSSSCHHHHHHHHHHH---T-----CEEEEE-SSCTTCTTCHH--HHHHHHHHHHHT
T ss_pred c-cCCCEEEEEcCCCCccCHHHHHHHHHhC---C-----ceEEEe-CCCccccccHH--HHHHHHHHHHHh
Confidence 3 7889999999999999999999999888 2 233336 89998743222 223345566653
No 96
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.69 E-value=2.8e-16 Score=168.35 Aligned_cols=147 Identities=20% Similarity=0.201 Sum_probs=102.0
Q ss_pred CceEEEEEEECCCCcEEEEEEEEcCCCC--CCCCccEEEEEcCCCCCCcCcc----cHHHHHHHHHCCeEEEEEcCCCCC
Q 004839 464 FYSCEQYDVPSHDGISVPLTIIYSPKYK--KENQNPGLLHGHGAYGELLDKR----WRSELKSLLDRGWVVAFADVRGGG 537 (728)
Q Consensus 464 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~--~~~~~P~vv~~hGg~~~~~~~~----~~~~~~~l~~~Gy~v~~~d~RG~g 537 (728)
.+..+.+.+++.||..+.++.+.|.... ..++.|+||++||..+...... +......|+++||.|+++|+||+|
T Consensus 24 ~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G 103 (377)
T 1k8q_A 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNT 103 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTST
T ss_pred CCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCC
Confidence 4567888899999999998776554311 1135789999999766442111 123445899999999999999998
Q ss_pred CCCCcccccccc-CCCCCcH----H-HHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCC---ceeEEEEeCC
Q 004839 538 GGGKKWHHDGRR-TKKLNSI----K-DFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPD---LFRAVVLEVP 608 (728)
Q Consensus 538 ~~G~~~~~~~~~-~~~~~~~----~-D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~---~f~a~v~~~p 608 (728)
.+...-...... .....++ + |+.+++++++++- +.+++.++|||+||.+++.++.++|+ +++++|+.+|
T Consensus 104 ~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~ 181 (377)
T 1k8q_A 104 WARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAP 181 (377)
T ss_dssp TSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESC
T ss_pred CCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCC
Confidence 764321000000 0001233 3 6666888877642 34689999999999999999999998 8999999999
Q ss_pred cccc
Q 004839 609 FLDA 612 (728)
Q Consensus 609 ~~d~ 612 (728)
....
T Consensus 182 ~~~~ 185 (377)
T 1k8q_A 182 VATV 185 (377)
T ss_dssp CSCC
T ss_pred chhc
Confidence 7653
No 97
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.69 E-value=6.5e-17 Score=166.38 Aligned_cols=216 Identities=12% Similarity=0.017 Sum_probs=140.5
Q ss_pred CCCceEEEEEEECC-CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHH-HHCC---eEEEEEcCCCC
Q 004839 462 SEFYSCEQYDVPSH-DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSL-LDRG---WVVAFADVRGG 536 (728)
Q Consensus 462 ~~~~~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l-~~~G---y~v~~~d~RG~ 536 (728)
......+.+++.|. +|..+.++++.|++..+++++|+|+++||+........+......+ ++.| ++|+.+|+|++
T Consensus 13 ~~~~~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~ 92 (275)
T 2qm0_A 13 IITSNTEQWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIE 92 (275)
T ss_dssp CCCTTEEEEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCS
T ss_pred eecCCceEEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCC
Confidence 44567888999987 7899999999999876667899999999974311101111111122 3467 99999999986
Q ss_pred CCCCC-----cc---------ccccc----cCC-CCCcHHHHH--HHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHh
Q 004839 537 GGGGK-----KW---------HHDGR----RTK-KLNSIKDFI--SCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC 595 (728)
Q Consensus 537 g~~G~-----~~---------~~~~~----~~~-~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~ 595 (728)
+.++. ++ ..... ... +...+.|++ +.+.++.++-.+|+++++|+|+||||++++.++.+
T Consensus 93 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~ 172 (275)
T 2qm0_A 93 GAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFT 172 (275)
T ss_dssp SSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred CcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHh
Confidence 43321 00 00000 001 111344543 23445555555789999999999999999999999
Q ss_pred CCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHH
Q 004839 596 CPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWE 675 (728)
Q Consensus 596 ~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~ 675 (728)
+|++|+++++.+|.+.+.... .. .... ...+.. + ... ...|+++++|+.|..++..+
T Consensus 173 ~p~~f~~~~~~s~~~~~~~~~-----------~~--~~~~--~~~~~~---~----~~~-~~~~~~l~~G~~D~~~~~~~ 229 (275)
T 2qm0_A 173 NLNAFQNYFISSPSIWWNNKS-----------VL--EKEE--NLIIEL---N----NAK-FETGVFLTVGSLEREHMVVG 229 (275)
T ss_dssp CGGGCSEEEEESCCTTHHHHG-----------GG--GGTT--HHHHHH---H----TCS-SCEEEEEEEETTSCHHHHHH
T ss_pred CchhhceeEEeCceeeeChHH-----------HH--HHHH--HHHhhh---c----ccC-CCceEEEEeCCcccchhhHH
Confidence 999999999999986543210 00 0000 011111 0 122 46688899999999899999
Q ss_pred HHHHHHHH---HhCCCCCCCccEEE--EcCCCCCC
Q 004839 676 AAKWVARV---RESTIYDPKRPILL--NLTTDIVE 705 (728)
Q Consensus 676 ~~~~~~~L---~~~~~~~~~~~~~~--~~~~gH~~ 705 (728)
+++++++| ++.| .++.+ +++++|+.
T Consensus 230 ~~~~~~~L~~~~~~g-----~~~~~~~~~g~~H~~ 259 (275)
T 2qm0_A 230 ANELSERLLQVNHDK-----LKFKFYEAEGENHAS 259 (275)
T ss_dssp HHHHHHHHHHCCCTT-----EEEEEEEETTCCTTT
T ss_pred HHHHHHHHHhcccCC-----ceEEEEECCCCCccc
Confidence 99999999 4455 34444 78999964
No 98
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.69 E-value=1.5e-16 Score=157.73 Aligned_cols=199 Identities=14% Similarity=0.130 Sum_probs=134.9
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccC-C---
Q 004839 476 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRT-K--- 551 (728)
Q Consensus 476 dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~-~--- 551 (728)
++..+... ++|+.. .+.|+||++||..+.. ..|......|++ ||.|+.+|.++....|..|+...... .
T Consensus 14 ~~~~l~~~-~~~~~~---~~~p~vv~lHG~g~~~--~~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~ 86 (223)
T 3b5e_A 14 TDLAFPYR-LLGAGK---ESRECLFLLHGSGVDE--TTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQK 86 (223)
T ss_dssp CSSSSCEE-EESTTS---SCCCEEEEECCTTBCT--TTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHH
T ss_pred cCCCceEE-EeCCCC---CCCCEEEEEecCCCCH--HHHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHH
Confidence 34445543 344432 2249999999975543 356666777765 99999999887533355554322110 0
Q ss_pred -CCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccc
Q 004839 552 -KLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEE 630 (728)
Q Consensus 552 -~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~ 630 (728)
.....+|+.+.++++.++..+|+++++++|+|+||.+++.++.++|++++++|+.+|......
T Consensus 87 ~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------------- 150 (223)
T 3b5e_A 87 SILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH---------------- 150 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS----------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc----------------
Confidence 012345666667777666457889999999999999999999999999999999998653210
Q ss_pred cCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhh
Q 004839 631 FGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYL 710 (728)
Q Consensus 631 ~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~ 710 (728)
+ + .... ++.|+|+++|+.|..||+.++. +++.|++++.+ ..+..++ +||.....
T Consensus 151 ---~-------------~--~~~~-~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~---~~~~~~~-~gH~~~~~-- 204 (223)
T 3b5e_A 151 ---V-------------P--ATDL-AGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAE---VDARIIP-SGHDIGDP-- 204 (223)
T ss_dssp ---C-------------C--CCCC-TTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCE---EEEEEES-CCSCCCHH--
T ss_pred ---c-------------c--cccc-cCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCc---eEEEEec-CCCCcCHH--
Confidence 0 0 1122 5789999999999999999999 99999988742 1222277 99987431
Q ss_pred hHHHHHHHHHHHHHhh
Q 004839 711 QCKESALETAFLIKMM 726 (728)
Q Consensus 711 ~~~~~~~~~afl~~~l 726 (728)
......+||.+.+
T Consensus 205 ---~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 205 ---DAAIVRQWLAGPI 217 (223)
T ss_dssp ---HHHHHHHHHHCC-
T ss_pred ---HHHHHHHHHHhhh
Confidence 2234668887654
No 99
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.69 E-value=5.1e-16 Score=154.08 Aligned_cols=183 Identities=11% Similarity=0.058 Sum_probs=132.5
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEE--cCCCCCCCCCcccccc-ccCCC----CCcHHHHHHHHHHH
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFA--DVRGGGGGGKKWHHDG-RRTKK----LNSIKDFISCARFL 566 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~--d~RG~g~~G~~~~~~~-~~~~~----~~~~~D~~~~~~~l 566 (728)
++.|+||++||..+.. ..|......|++ ||.|+.+ |.||.|... |.... ..... ....+|+.+.++++
T Consensus 36 ~~~~~vv~~HG~~~~~--~~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 110 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNE--LDLLPLAEIVDS-EASVLSVRGNVLENGMPR--FFRRLAEGIFDEEDLIFRTKELNEFLDEA 110 (226)
T ss_dssp TTSCEEEEECCTTCCT--TTTHHHHHHHHT-TSCEEEECCSEEETTEEE--SSCEEETTEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCCh--hHHHHHHHHhcc-CceEEEecCcccCCcchh--hccccCccCcChhhHHHHHHHHHHHHHHH
Confidence 4579999999976543 456777778877 9999999 888887531 21110 01001 11234556666666
Q ss_pred HHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHcc
Q 004839 567 IEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNY 646 (728)
Q Consensus 567 ~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~ 646 (728)
.++..+++++++++|+|+||++++.++.++|++++++|+.+|..+...
T Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------------------------- 158 (226)
T 2h1i_A 111 AKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG-------------------------------- 158 (226)
T ss_dssp HHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS--------------------------------
T ss_pred HhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc--------------------------------
Confidence 777667889999999999999999999999999999999999754310
Q ss_pred CcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEE-EEcCCCCCCCchhhhHHHHHHHHHHHHHh
Q 004839 647 SPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPIL-LNLTTDIVEENRYLQCKESALETAFLIKM 725 (728)
Q Consensus 647 sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~-~~~~~gH~~~~~~~~~~~~~~~~afl~~~ 725 (728)
. .....++.|+++++|+.|..||+.++.++++++++.+. .+. .++++||.... +......+||.++
T Consensus 159 --~-~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~gH~~~~-----~~~~~~~~~l~~~ 225 (226)
T 2h1i_A 159 --M-QLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANA-----NVTMHWENRGHQLTM-----GEVEKAKEWYDKA 225 (226)
T ss_dssp --C-CCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTC-----EEEEEEESSTTSCCH-----HHHHHHHHHHHHH
T ss_pred --c-ccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCC-----eEEEEeCCCCCCCCH-----HHHHHHHHHHHHh
Confidence 0 01112578999999999999999999999999998763 333 47899998732 2344567888876
Q ss_pred h
Q 004839 726 M 726 (728)
Q Consensus 726 l 726 (728)
|
T Consensus 226 l 226 (226)
T 2h1i_A 226 F 226 (226)
T ss_dssp C
T ss_pred C
Confidence 5
No 100
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.68 E-value=4.5e-14 Score=149.60 Aligned_cols=248 Identities=11% Similarity=0.123 Sum_probs=161.9
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecCC--------------
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQN-------------- 191 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~-------------- 191 (728)
+..++|||||++|||.....+.+..+||++|+++|+...++....+..+.|||||+.|+|...+..
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAW 140 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CCCC
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEccccee
Confidence 345789999999999987665567899999999998777654222788999999999999875410
Q ss_pred --------CCcceeEEEECCCCCc-eeEEeeecCcceEEEEEEcCCCCEEEEEEcCC------C-ceEEEEEeCCCCCCC
Q 004839 192 --------KRPYQIYCSIIGSTDE-DALLLEESNENVYVNIRHTKDFHFVCVHTFST------T-SSKVFLINAADPFSG 255 (728)
Q Consensus 192 --------~~~~~v~~~~l~t~~~-~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~------~-~~~l~~~dl~~~~~~ 255 (728)
....+||++++.+++. ..+. . . ....+.||||| |++.+... . ..+||++| + ++
T Consensus 141 ~~g~~~~~~~~~~l~~~d~~~~~~~~~l~-~-~---~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~--~~ 209 (347)
T 2gop_A 141 FDDLGFFDGEKTTFWIFDTESEEVIEEFE-K-P---RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--D--GK 209 (347)
T ss_dssp ---------CEEEEEEEETTTTEEEEEEE-E-E---TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--T--TE
T ss_pred ecCcccccCccceEEEEECCCCeEEeeec-C-C---CcccccCCCCe--EEEEEecccccccccccccEEEeC--C--Cc
Confidence 1135799999987653 3332 2 2 23457899999 55555432 1 56899999 4 45
Q ss_pred eEEeeecCCceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEE-EEeeCCEEEEE
Q 004839 256 LTLIWECEGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVED-VDFCKTHMALI 334 (728)
Q Consensus 256 ~~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~-~~~~~~~lv~~ 334 (728)
.+.+... .. ...+++||+.|++.++..... ...+..|+.++ . +.++.++. ..+..+.. +.+. +.+++.
T Consensus 210 ~~~l~~~-~~-~~~~spdg~~l~~~~~~~~~~-~~~~~~l~~~d-~-----~~~~~l~~-~~~~~~~~~~~~s-dg~~~~ 278 (347)
T 2gop_A 210 EEKMFEK-VS-FYAVDSDGERILLYGKPEKKY-MSEHNKLYIYD-G-----KEVMGILD-EVDRGVGQAKIKD-GKVYFT 278 (347)
T ss_dssp EEEEEEE-ES-EEEEEECSSCEEEEECCSSSC-CCSSCEEEEEC-S-----SCEEESST-TCCSEEEEEEEET-TEEEEE
T ss_pred eEEeccC-cc-eeeECCCCCEEEEEEccccCC-ccccceEEEEC-C-----CceEeccc-cCCcccCCccEEc-CcEEEE
Confidence 6666654 22 334489999999988754211 11235788877 4 33444433 33445654 6666 558888
Q ss_pred EecCCeeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEE
Q 004839 335 LREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNI 414 (728)
Q Consensus 335 ~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~ 414 (728)
...++..+|+ ++ + ++ .. ..+..+..+..+. ++ . .++++.++..+|.++|.+| ++.++
T Consensus 279 ~~~~~~~~l~-~~-~-g~---~~-------~~~~~~~~v~~~~----~s--~-~~~~~~~~~~~~~~l~~~~---g~~~~ 335 (347)
T 2gop_A 279 LFEEGSVNLY-IW-D-GE---IK-------PIAKGRHWIMGFD----VD--E-IVVYLKETATRLRELFTWD---GEEKQ 335 (347)
T ss_dssp EEETTEEEEE-EE-S-SS---EE-------EEECSSSEEEEEE----ES--S-SEEEEEECSSSCCEEEEES---SSEEE
T ss_pred EecCCcEEEE-Ec-C-Cc---eE-------EEecCCCeEEeee----ee--C-cEEEEEcCCCChHHheEeC---CcEEE
Confidence 8888888888 87 3 21 00 1122222222222 22 2 6889999999999999997 55665
Q ss_pred EEee
Q 004839 415 IQQQ 418 (728)
Q Consensus 415 l~~~ 418 (728)
|+..
T Consensus 336 lt~~ 339 (347)
T 2gop_A 336 LTDY 339 (347)
T ss_dssp CCCT
T ss_pred eccc
Confidence 5543
No 101
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.68 E-value=8.1e-16 Score=157.12 Aligned_cols=222 Identities=18% Similarity=0.149 Sum_probs=134.0
Q ss_pred EEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccC
Q 004839 471 DVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRT 550 (728)
Q Consensus 471 ~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~ 550 (728)
++...||.+|.+... ++.|.||++||..+.. ..|......|+++||.|+++|+||+|.+....
T Consensus 2 ~~~~~~g~~l~y~~~--------G~g~~vvllHG~~~~~--~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------- 64 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDW--------GSGKPVLFSHGWLLDA--DMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPW------- 64 (271)
T ss_dssp EEECTTSCEEEEEEE--------SSSSEEEEECCTTCCG--GGGHHHHHHHHTTTCEEEEECCTTSTTSCCCS-------
T ss_pred eEEcCCCCEEEEEcc--------CCCCeEEEECCCCCcH--HHHHHHHHHHHhCCceEEEecCCCCccCCCCC-------
Confidence 367789998875432 1235688999976643 56777888999999999999999999764321
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHh-CCCceeEEEEeCCcccchhhccCCCCCCCc--cc
Q 004839 551 KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC-CPDLFRAVVLEVPFLDATNTLLYPILPLIA--AD 627 (728)
Q Consensus 551 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~-~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~--~~ 627 (728)
...+++++.+.+..+++. .+.+++.++||||||++++.++.+ .|++++++|+.++....... ....+... ..
T Consensus 65 -~~~~~~~~a~d~~~~l~~--l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~ 139 (271)
T 3ia2_A 65 -TGNDYDTFADDIAQLIEH--LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ--KPDYPQGVPLDV 139 (271)
T ss_dssp -SCCSHHHHHHHHHHHHHH--HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBC--BTTBTTSBCHHH
T ss_pred -CCCCHHHHHHHHHHHHHH--hCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccC--CCCCcccccHHH
Confidence 124566666666665543 234689999999999877665554 59999999998765432110 00000000 00
Q ss_pred ---------------cc----c-c----CCCCCHHH----------------HH---HHHccCcccccccCCCCCeEEEE
Q 004839 628 ---------------YE----E-F----GYPGDIDD----------------FH---AIRNYSPYDNIQKDVLYPAVLVT 664 (728)
Q Consensus 628 ---------------~~----~-~----g~p~~~~~----------------~~---~~~~~sP~~~i~~~~~~P~lli~ 664 (728)
.. . + +....... .+ .+...+....+.+ +++|+|+|+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~Lvi~ 218 (271)
T 3ia2_A 140 FARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAK-IDVPTLVIH 218 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTT-CCSCEEEEE
T ss_pred HHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccC-CCCCEEEEE
Confidence 00 0 0 00011100 00 0111111222344 899999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHH
Q 004839 665 SSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN-RYLQCKESALETAFLI 723 (728)
Q Consensus 665 g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~ 723 (728)
|+.|..||+.++.++++++... ..+.+++++||.... .... ......+||.
T Consensus 219 G~~D~~~p~~~~~~~~~~~~~~------~~~~~~~~~gH~~~~e~p~~--~~~~i~~Fl~ 270 (271)
T 3ia2_A 219 GDGDQIVPFETTGKVAAELIKG------AELKVYKDAPHGFAVTHAQQ--LNEDLLAFLK 270 (271)
T ss_dssp ETTCSSSCGGGTHHHHHHHSTT------CEEEEETTCCTTHHHHTHHH--HHHHHHHHHT
T ss_pred eCCCCcCChHHHHHHHHHhCCC------ceEEEEcCCCCcccccCHHH--HHHHHHHHhh
Confidence 9999999998876766665321 233447999997533 2222 2344567774
No 102
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.68 E-value=1.4e-15 Score=156.74 Aligned_cols=241 Identities=11% Similarity=0.049 Sum_probs=150.4
Q ss_pred EEEEEEECC-CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHH---HHHHHHCCeEEEEEcCCCCCCCCCc
Q 004839 467 CEQYDVPSH-DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSE---LKSLLDRGWVVAFADVRGGGGGGKK 542 (728)
Q Consensus 467 ~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~---~~~l~~~Gy~v~~~d~RG~g~~G~~ 542 (728)
.+.+++.|. .|.++++++ |++. + |+|+++||..+......|... .+.++++|++|+++|.+|++.|. .
T Consensus 6 ~~~~~~~s~~~~~~~~v~~--~p~~---~--~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~-~ 77 (280)
T 1dqz_A 6 VEYLQVPSASMGRDIKVQF--QGGG---P--HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYT-D 77 (280)
T ss_dssp EEEEEEEETTTTEEEEEEE--ECCS---S--SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTS-B
T ss_pred EEEEEEECcccCceeEEEE--cCCC---C--CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCcccc-C
Confidence 455666654 567777653 4332 2 588999998532222344432 35677789999999988655442 1
Q ss_pred ccccccc--CCCCCcHHHHH--HHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccC
Q 004839 543 WHHDGRR--TKKLNSIKDFI--SCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLY 618 (728)
Q Consensus 543 ~~~~~~~--~~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~ 618 (728)
|...... ......+.+++ +.+.++.++--+++++++|+|+||||++++.++.++|++|+++|+.+|.+++......
T Consensus 78 ~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~ 157 (280)
T 1dqz_A 78 WYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWP 157 (280)
T ss_dssp CSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTTHH
T ss_pred CCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcchh
Confidence 2111100 00124555543 3344444423467789999999999999999999999999999999998875421000
Q ss_pred CCC------CCCcccccccCCCCCHHHHHHHHccCcccccccC--CCCCeEEEEcCCCC--------------CCCHHHH
Q 004839 619 PIL------PLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKD--VLYPAVLVTSSFNT--------------RFGVWEA 676 (728)
Q Consensus 619 ~~~------~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~--~~~P~lli~g~~D~--------------~Vp~~~~ 676 (728)
..+ .........||.|.. +.+.+.+|+.++.+. ...|+++.+|..|. .+++.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~ 233 (280)
T 1dqz_A 158 TLIGLAMNDSGGYNANSMWGPSSD----PAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTN 233 (280)
T ss_dssp HHHHHHHHHTTSCCHHHHHCSTTS----HHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHH
T ss_pred hhHHHHhhhccCcCHHHhcCCCCc----hhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHHHHHH
Confidence 000 000011223565542 245677888766541 25677888888886 5789999
Q ss_pred HHHHHHHHhCC-CCCCCccEEE--EcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 677 AKWVARVREST-IYDPKRPILL--NLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 677 ~~~~~~L~~~~-~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
++++++|+++| ++ +.+ +++++|....-. ..+...+.||.+.||
T Consensus 234 ~~~~~~L~~~g~~~-----~~~~~~~~g~H~~~~w~---~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 234 QTFRDTYAADGGRN-----GVFNFPPNGTHSWPYWN---EQLVAMKADIQHVLN 279 (280)
T ss_dssp HHHHHHHHHTTCCS-----EEEECCSCCCSSHHHHH---HHHHHTHHHHHHHHH
T ss_pred HHHHHHHHhCCCCc-----eEEEecCCCccChHHHH---HHHHHHHHHHHHHhC
Confidence 99999999988 64 344 578899653222 233456789888875
No 103
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.67 E-value=2.2e-15 Score=156.64 Aligned_cols=208 Identities=13% Similarity=0.065 Sum_probs=132.9
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcC-----cccHHHHHHHHHCC----eEEEEEcC
Q 004839 463 EFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLD-----KRWRSELKSLLDRG----WVVAFADV 533 (728)
Q Consensus 463 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~-----~~~~~~~~~l~~~G----y~v~~~d~ 533 (728)
...+.+.+++.+.+| .+.++++.|++..+++++|+|+++||+.+.... ..+......|+++| |+|+.+|+
T Consensus 37 ~~g~~~~~~~~s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~ 115 (297)
T 1gkl_A 37 QAGRIVKETYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTF 115 (297)
T ss_dssp SCCEEEEEEEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCS
T ss_pred CCceEEEEEEEcCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecC
Confidence 445778899999887 899999999987666789999999998654321 11234556777764 99999999
Q ss_pred CCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHc-CC-----------CCCCcEEEEEeCccHHHHHHHHHhCCCcee
Q 004839 534 RGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEK-EI-----------VKEHKLAGWGYSAGGLLVAAAINCCPDLFR 601 (728)
Q Consensus 534 RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~-----------~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~ 601 (728)
+|+.+.+..|.. ...+| .+.++.++ .. .|+++++|+|+||||++++.++.++|++|+
T Consensus 116 ~~~~~~~~~~~~--------~~~~~---l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~ 184 (297)
T 1gkl_A 116 NGGNCTAQNFYQ--------EFRQN---VIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVA 184 (297)
T ss_dssp CSTTCCTTTHHH--------HHHHT---HHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCC
T ss_pred cCCccchHHHHH--------HHHHH---HHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhh
Confidence 975432222210 01223 33344333 22 377899999999999999999999999999
Q ss_pred EEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHH
Q 004839 602 AVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVA 681 (728)
Q Consensus 602 a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~ 681 (728)
++++.+|...+.. . ... .......+...+ .+.. ...++++.+|..|.. +.++.++++
T Consensus 185 ~~v~~sg~~~~~~------~-----~~~------~~~~~~~~~~~~---~~~~-~~~~l~~~~G~~D~~--~~~~~~l~~ 241 (297)
T 1gkl_A 185 YFMPLSGDYWYGN------S-----PQD------KANSIAEAINRS---GLSK-REYFVFAATGSEDIA--YANMNPQIE 241 (297)
T ss_dssp EEEEESCCCCBSS------S-----HHH------HHHHHHHHHHHH---TCCT-TSCEEEEEEETTCTT--HHHHHHHHH
T ss_pred eeeEeccccccCC------c-----cch------hhhHHHHHHhhc---cCCc-CcEEEEEEeCCCccc--chhHHHHHH
Confidence 9999999654321 0 000 000111111111 1221 234444457888864 568999999
Q ss_pred HHHhCC-CC----CCCccEEE--EcCCCCCC
Q 004839 682 RVREST-IY----DPKRPILL--NLTTDIVE 705 (728)
Q Consensus 682 ~L~~~~-~~----~~~~~~~~--~~~~gH~~ 705 (728)
+|++++ .. .....+.+ ++++||..
T Consensus 242 ~L~~~g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 242 AMKALPHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp HHHTSTTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred HHHHcCCccccccccCCceEEEECCCCCcCH
Confidence 999987 10 00013334 78889964
No 104
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.67 E-value=2.2e-15 Score=152.36 Aligned_cols=200 Identities=15% Similarity=0.118 Sum_probs=133.3
Q ss_pred EEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccC
Q 004839 471 DVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRT 550 (728)
Q Consensus 471 ~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~ 550 (728)
.+...||.++.+...- +.|+||++||..+.. ..|......|+ +||.|+.+|+||+|.+...
T Consensus 6 ~~~~~~g~~l~~~~~g--------~~~~vv~lHG~~~~~--~~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~-------- 66 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSG--------SGPPVVLVGGALSTR--AGGAPLAERLA-PHFTVICYDRRGRGDSGDT-------- 66 (262)
T ss_dssp EEECTTSCEEEEEEEE--------CSSEEEEECCTTCCG--GGGHHHHHHHT-TTSEEEEECCTTSTTCCCC--------
T ss_pred eEEcCCCcEEEEEEcC--------CCCcEEEECCCCcCh--HHHHHHHHHHh-cCcEEEEEecCCCcCCCCC--------
Confidence 3677899988764431 247899999976644 45677777787 8999999999999976432
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCC------
Q 004839 551 KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLI------ 624 (728)
Q Consensus 551 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~------ 624 (728)
...+++|+.+.+..+++.- + +++.++|+|+||.+++.++.++| +++++|+.+|................
T Consensus 67 -~~~~~~~~~~~~~~~~~~l--~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (262)
T 3r0v_A 67 -PPYAVEREIEDLAAIIDAA--G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDAL 141 (262)
T ss_dssp -SSCCHHHHHHHHHHHHHHT--T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHhc--C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHH
Confidence 1346788887777777642 3 79999999999999999999999 99999999987654321100000000
Q ss_pred ----------cccccc-cCCCCCHHHHHHHHc------------------------cCcccccccCCCCCeEEEEcCCCC
Q 004839 625 ----------AADYEE-FGYPGDIDDFHAIRN------------------------YSPYDNIQKDVLYPAVLVTSSFNT 669 (728)
Q Consensus 625 ----------~~~~~~-~g~p~~~~~~~~~~~------------------------~sP~~~i~~~~~~P~lli~g~~D~ 669 (728)
...... .+.+ ++..+.+.. ..+...+.+ +++|+|+|+|+.|.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lii~G~~D~ 218 (262)
T 3r0v_A 142 LAEGRRGDAVTYFMTEGVGVP--PDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFAS-ISIPTLVMDGGASP 218 (262)
T ss_dssp HHTTCHHHHHHHHHHHTSCCC--HHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTT-CCSCEEEEECTTCC
T ss_pred hhccchhhHHHHHhhcccCCC--HHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCc-CCCCEEEEeecCCC
Confidence 000000 1111 111111111 012334444 89999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCC
Q 004839 670 RFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIV 704 (728)
Q Consensus 670 ~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 704 (728)
.||+..+.++.+.+... .+..++++||.
T Consensus 219 ~~~~~~~~~~~~~~~~~-------~~~~~~~~gH~ 246 (262)
T 3r0v_A 219 AWIRHTAQELADTIPNA-------RYVTLENQTHT 246 (262)
T ss_dssp HHHHHHHHHHHHHSTTE-------EEEECCCSSSS
T ss_pred CCCHHHHHHHHHhCCCC-------eEEEecCCCcc
Confidence 99999999988877532 23337899994
No 105
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.66 E-value=2.6e-15 Score=152.62 Aligned_cols=196 Identities=16% Similarity=0.120 Sum_probs=134.5
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCC-CCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCC
Q 004839 463 EFYSCEQYDVPSHDGISVPLTIIYSPKYKK-ENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGK 541 (728)
Q Consensus 463 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~-~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~ 541 (728)
..+..+...+... +.+++|.+... +++.|+||++||+.+.. ..|......|+++||.|+.+|+||++
T Consensus 21 g~~~v~~~~~~~~------~~~~~p~~~~~~g~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~d~~~s~---- 88 (258)
T 2fx5_A 21 GPYTVSSQSEGPS------CRIYRPRDLGQGGVRHPVILWGNGTGAGP--STYAGLLSHWASHGFVVAAAETSNAG---- 88 (258)
T ss_dssp CSCCEEEEEETTT------EEEEEESSTTGGGCCEEEEEEECCTTCCG--GGGHHHHHHHHHHTCEEEEECCSCCT----
T ss_pred CCcceeeeeccCc------EEEEeCCCCcccCCCceEEEEECCCCCCc--hhHHHHHHHHHhCCeEEEEecCCCCc----
Confidence 3444555444432 66788875322 23789999999976633 56777889999999999999999641
Q ss_pred ccccccccCCCCCcHHHHHHHHHHHHHc---------CCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccc
Q 004839 542 KWHHDGRRTKKLNSIKDFISCARFLIEK---------EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDA 612 (728)
Q Consensus 542 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~---------~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~ 612 (728)
...|+..+++++.+. ..+|.++++++|+|+||++++.++ .+++++++|+..|....
T Consensus 89 -------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~ 153 (258)
T 2fx5_A 89 -------------TGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG 153 (258)
T ss_dssp -------------TSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS
T ss_pred -------------cHHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc
Confidence 124556666666542 345778999999999999999887 46789999987774321
Q ss_pred hhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHH-HHHHHHHHHhCCCCCC
Q 004839 613 TNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWE-AAKWVARVRESTIYDP 691 (728)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~-~~~~~~~L~~~~~~~~ 691 (728)
.+.. ...+.+ ++.|+|+|+|+.|..+|+.. +.+++++. +.+
T Consensus 154 --------------------~~~~------------~~~~~~-i~~P~lii~G~~D~~~~~~~~~~~~~~~~---~~~-- 195 (258)
T 2fx5_A 154 --------------------LGHD------------SASQRR-QQGPMFLMSGGGDTIAFPYLNAQPVYRRA---NVP-- 195 (258)
T ss_dssp --------------------TTCC------------GGGGGC-CSSCEEEEEETTCSSSCHHHHTHHHHHHC---SSC--
T ss_pred --------------------cccc------------hhhhcc-CCCCEEEEEcCCCcccCchhhHHHHHhcc---CCC--
Confidence 0100 112344 78899999999999999986 88887772 211
Q ss_pred CccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHHHhh
Q 004839 692 KRPILLNLTTDIVEEN-RYLQCKESALETAFLIKMM 726 (728)
Q Consensus 692 ~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~~~l 726 (728)
..+.+++++||+... ....+ .....+||.++|
T Consensus 196 -~~~~~~~g~~H~~~~~~~~~~--~~~i~~fl~~~l 228 (258)
T 2fx5_A 196 -VFWGERRYVSHFEPVGSGGAY--RGPSTAWFRFQL 228 (258)
T ss_dssp -EEEEEESSCCTTSSTTTCGGG--HHHHHHHHHHHH
T ss_pred -eEEEEECCCCCccccchHHHH--HHHHHHHHHHHh
Confidence 233337999998654 22222 344678988776
No 106
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.66 E-value=5.1e-16 Score=151.59 Aligned_cols=186 Identities=9% Similarity=-0.103 Sum_probs=116.9
Q ss_pred cEEEEEcCCCCCCcCcccHHHHHHHHHC--CeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCC
Q 004839 497 PGLLHGHGAYGELLDKRWRSELKSLLDR--GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 574 (728)
Q Consensus 497 P~vv~~hGg~~~~~~~~~~~~~~~l~~~--Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 574 (728)
|+||++||..++..........+++.++ ||.|++||++|+|. |..+.++.++++ .++
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~-------------------~~~~~l~~~~~~--~~~ 61 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPA-------------------EAAEMLESIVMD--KAG 61 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHH-------------------HHHHHHHHHHHH--HTT
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHH-------------------HHHHHHHHHHHh--cCC
Confidence 8999999853332211122344566664 59999999998762 233344444433 245
Q ss_pred CcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCC--CCHHHHHHHHccCccccc
Q 004839 575 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYP--GDIDDFHAIRNYSPYDNI 652 (728)
Q Consensus 575 ~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p--~~~~~~~~~~~~sP~~~i 652 (728)
++|+|+|+||||++++.++.++|+...+++..++..+......... .....+.+ ........ ..+....+
T Consensus 62 ~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~~ 133 (202)
T 4fle_A 62 QSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGEN------QNPYTGQKYVLESRHIYD--LKAMQIEK 133 (202)
T ss_dssp SCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEE------ECTTTCCEEEECHHHHHH--HHTTCCSS
T ss_pred CcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhh------ccccccccccchHHHHHH--HHhhhhhh
Confidence 7999999999999999999999998888877666554433211000 00000111 11112222 22334445
Q ss_pred ccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHh
Q 004839 653 QKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKM 725 (728)
Q Consensus 653 ~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~ 725 (728)
.+ ++.|+|+|||..|..||++++.++++ + ..+++.+++||.+...++.++ .+.+||.-.
T Consensus 134 ~~-~~~P~LiihG~~D~~Vp~~~s~~l~~-----~-----~~l~i~~g~~H~~~~~~~~~~---~I~~FL~~a 192 (202)
T 4fle_A 134 LE-SPDLLWLLQQTGDEVLDYRQAVAYYT-----P-----CRQTVESGGNHAFVGFDHYFS---PIVTFLGLA 192 (202)
T ss_dssp CS-CGGGEEEEEETTCSSSCHHHHHHHTT-----T-----SEEEEESSCCTTCTTGGGGHH---HHHHHHTCC
T ss_pred hc-cCceEEEEEeCCCCCCCHHHHHHHhh-----C-----CEEEEECCCCcCCCCHHHHHH---HHHHHHhhh
Confidence 54 88999999999999999999988863 2 233447999998765444443 356888643
No 107
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.66 E-value=7e-15 Score=150.28 Aligned_cols=118 Identities=21% Similarity=0.250 Sum_probs=88.4
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCC
Q 004839 472 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTK 551 (728)
Q Consensus 472 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~ 551 (728)
+++.||.++.+... ++.|.||++||..++. ..|......|+++||.|+++|+||+|.+... .
T Consensus 3 ~~~~~g~~l~y~~~--------g~~~~vvllHG~~~~~--~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~--------~ 64 (273)
T 1a8s_A 3 FTTRDGTQIYYKDW--------GSGQPIVFSHGWPLNA--DSWESQMIFLAAQGYRVIAHDRRGHGRSSQP--------W 64 (273)
T ss_dssp EECTTSCEEEEEEE--------SCSSEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCC--------S
T ss_pred EecCCCcEEEEEEc--------CCCCEEEEECCCCCcH--HHHhhHHhhHhhCCcEEEEECCCCCCCCCCC--------C
Confidence 56778988765332 1236799999976543 4677788899999999999999999976432 1
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC-CCceeEEEEeCCc
Q 004839 552 KLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC-PDLFRAVVLEVPF 609 (728)
Q Consensus 552 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~f~a~v~~~p~ 609 (728)
...+++++.+.+..+++. .+.+++.++||||||.+++.++.++ |++++++|+.++.
T Consensus 65 ~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 121 (273)
T 1a8s_A 65 SGNDMDTYADDLAQLIEH--LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAV 121 (273)
T ss_dssp SCCSHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEccc
Confidence 124677776666666654 2346899999999999998866665 9999999998864
No 108
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.65 E-value=1.1e-15 Score=165.48 Aligned_cols=241 Identities=13% Similarity=0.071 Sum_probs=148.9
Q ss_pred EECCCCcEEEEEEEEcCC---CCCCCCccEEEEEcCCCCCCcCcccHHHHHHHH----HCCe---EEEEEcCCCCCCCCC
Q 004839 472 VPSHDGISVPLTIIYSPK---YKKENQNPGLLHGHGAYGELLDKRWRSELKSLL----DRGW---VVAFADVRGGGGGGK 541 (728)
Q Consensus 472 ~~s~dG~~i~~~l~~p~~---~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~----~~Gy---~v~~~d~RG~g~~G~ 541 (728)
+.+.||.+|.+..+.|.+ ..+.++.|+||++||..+.. ..|......|+ +.|| .|+++|+||+|.+..
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~--~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~ 102 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSK--VVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAV 102 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCG--GGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHH
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcH--HHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCC
Confidence 567899999998887764 11234568999999976544 35666677787 4599 999999999986422
Q ss_pred ccccccccCCCCCcHHHHHHHHHHHHHc-C---CCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc-
Q 004839 542 KWHHDGRRTKKLNSIKDFISCARFLIEK-E---IVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL- 616 (728)
Q Consensus 542 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~---~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~- 616 (728)
.- .+ ......++.++.+.+..+++. . -+++.++.++|+||||.+++.++.++|++++++|+.+|........
T Consensus 103 ~~--~~-~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 179 (398)
T 2y6u_A 103 RN--RG-RLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIG 179 (398)
T ss_dssp HT--TT-TBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCS
T ss_pred CC--cc-ccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccccc
Confidence 10 00 001234566665555555543 2 1445569999999999999999999999999999999977642100
Q ss_pred -cCCCCC-----CCc-----------------cc----cc--ccCCCCCHHHHHHHHc----------------------
Q 004839 617 -LYPILP-----LIA-----------------AD----YE--EFGYPGDIDDFHAIRN---------------------- 645 (728)
Q Consensus 617 -~~~~~~-----~~~-----------------~~----~~--~~g~p~~~~~~~~~~~---------------------- 645 (728)
.....+ +.. .. +. .+....+++..+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (398)
T 2y6u_A 180 AGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQ 259 (398)
T ss_dssp CCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSCH
T ss_pred cccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCCc
Confidence 000000 000 00 00 0111122222222221
Q ss_pred ------c--------CcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhh
Q 004839 646 ------Y--------SPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQ 711 (728)
Q Consensus 646 ------~--------sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 711 (728)
+ .+...+.+ ++.|+|+|+|+.|..||+..+.++++.+.. ..+.+++++||.... ...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~-i~~PvLii~G~~D~~~~~~~~~~l~~~~~~-------~~~~~~~~~gH~~~~-e~p 330 (398)
T 2y6u_A 260 AQNLLCYMNMQTFAPFLISNVKF-VRKRTIHIVGARSNWCPPQNQLFLQKTLQN-------YHLDVIPGGSHLVNV-EAP 330 (398)
T ss_dssp HHHHHTTSCGGGTHHHHHHHGGG-CCSEEEEEEETTCCSSCHHHHHHHHHHCSS-------EEEEEETTCCTTHHH-HSH
T ss_pred hhhhhhhcccccchHHHHHhccc-cCCCEEEEEcCCCCCCCHHHHHHHHHhCCC-------ceEEEeCCCCccchh-cCH
Confidence 0 01123444 789999999999999999999988888753 223337899997433 122
Q ss_pred HHHHHHHHHHHHHhh
Q 004839 712 CKESALETAFLIKMM 726 (728)
Q Consensus 712 ~~~~~~~~afl~~~l 726 (728)
-.......+||.+++
T Consensus 331 ~~~~~~i~~fl~~~~ 345 (398)
T 2y6u_A 331 DLVIERINHHIHEFV 345 (398)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 223444678887765
No 109
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.65 E-value=2.7e-14 Score=145.99 Aligned_cols=118 Identities=19% Similarity=0.186 Sum_probs=88.3
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCC
Q 004839 472 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTK 551 (728)
Q Consensus 472 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~ 551 (728)
+++.||.++.+... + +.|.||++||..+.. ..|......|+++||.|+++|.||+|.+... .
T Consensus 3 ~~~~~g~~l~y~~~---g-----~g~~vvllHG~~~~~--~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~--------~ 64 (274)
T 1a8q_A 3 CTTRDGVEIFYKDW---G-----QGRPVVFIHGWPLNG--DAWQDQLKAVVDAGYRGIAHDRRGHGHSTPV--------W 64 (274)
T ss_dssp EECTTSCEEEEEEE---C-----SSSEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCC--------S
T ss_pred EEccCCCEEEEEec---C-----CCceEEEECCCcchH--HHHHHHHHHHHhCCCeEEEEcCCCCCCCCCC--------C
Confidence 56778988765332 1 236799999976543 4677788899999999999999999976432 1
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC-CCceeEEEEeCCc
Q 004839 552 KLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC-PDLFRAVVLEVPF 609 (728)
Q Consensus 552 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~f~a~v~~~p~ 609 (728)
...+++++.+.+..++++- +.+++.++||||||.+++.++.++ |++++++|+.++.
T Consensus 65 ~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 121 (274)
T 1a8q_A 65 DGYDFDTFADDLNDLLTDL--DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAI 121 (274)
T ss_dssp SCCSHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CCCcHHHHHHHHHHHHHHc--CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCC
Confidence 1246677766666666542 346899999999999998877665 9999999998864
No 110
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.64 E-value=3.7e-15 Score=152.06 Aligned_cols=122 Identities=22% Similarity=0.231 Sum_probs=95.7
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.||.++.+...-+ ++.|+||++||..+.. ..|......|+++||.|+.+|+||+|...... .....
T Consensus 11 ~~g~~l~~~~~g~------~~~~~vv~~hG~~~~~--~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~------~~~~~ 76 (286)
T 3qit_A 11 FGGNQICLCSWGS------PEHPVVLCIHGILEQG--LAWQEVALPLAAQGYRVVAPDLFGHGRSSHLE------MVTSY 76 (286)
T ss_dssp ETTEEEEEEEESC------TTSCEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS------SGGGC
T ss_pred cCCceEEEeecCC------CCCCEEEEECCCCccc--chHHHHHHHhhhcCeEEEEECCCCCCCCCCCC------CCCCc
Confidence 4788888765422 2358899999986644 45778889999999999999999999763321 11234
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccc
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDA 612 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~ 612 (728)
+++++.+.+..++++- +.+++.++|+|+||++++.++.++|++++++|+.+|....
T Consensus 77 ~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 132 (286)
T 3qit_A 77 SSLTFLAQIDRVIQEL--PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPA 132 (286)
T ss_dssp SHHHHHHHHHHHHHHS--CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred CHHHHHHHHHHHHHhc--CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCC
Confidence 6778888777777653 3478999999999999999999999999999999987654
No 111
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.64 E-value=3.5e-15 Score=161.17 Aligned_cols=191 Identities=15% Similarity=0.138 Sum_probs=127.7
Q ss_pred CCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCC--------------cccccccc----C----
Q 004839 493 ENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGK--------------KWHHDGRR----T---- 550 (728)
Q Consensus 493 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~--------------~~~~~~~~----~---- 550 (728)
+++.|+||++||+.+.. ..|....+.|+++||+|+++|+||+|.... .|...... .
T Consensus 95 ~~~~P~Vv~~HG~~~~~--~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 172 (383)
T 3d59_A 95 GEKYPLVVFSHGLGAFR--TLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIR 172 (383)
T ss_dssp SSCEEEEEEECCTTCCT--TTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHH
T ss_pred CCCCCEEEEcCCCCCCc--hHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhh
Confidence 45789999999986643 457788899999999999999999876421 22110000 0
Q ss_pred --CCCCcHHHHHHHHHHHHH--------------------cCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCC
Q 004839 551 --KKLNSIKDFISCARFLIE--------------------KEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVP 608 (728)
Q Consensus 551 --~~~~~~~D~~~~~~~l~~--------------------~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p 608 (728)
.-....+|+..++++|.+ ++.+|++||+++|+|+||++++.++.+.+ +|+++|+.+|
T Consensus 173 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~ 251 (383)
T 3d59_A 173 NEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDA 251 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCC
Confidence 000124688889999876 46678899999999999999999988754 6999999887
Q ss_pred cccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCC
Q 004839 609 FLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTI 688 (728)
Q Consensus 609 ~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~ 688 (728)
... |...+ ...+ ++.|+|++||+.|..+ . ..+..++|.+.+.
T Consensus 252 ~~~----------------------p~~~~------------~~~~-i~~P~Lii~g~~D~~~--~-~~~~~~~l~~~~~ 293 (383)
T 3d59_A 252 WMF----------------------PLGDE------------VYSR-IPQPLFFINSEYFQYP--A-NIIKMKKCYSPDK 293 (383)
T ss_dssp CCT----------------------TCCGG------------GGGS-CCSCEEEEEETTTCCH--H-HHHHHHTTCCTTS
T ss_pred ccC----------------------CCchh------------hhcc-CCCCEEEEecccccch--h-hHHHHHHHHhcCC
Confidence 321 11000 1123 7789999999999743 2 2333466655543
Q ss_pred CCCCccEEEEcCCCCCCC--------------------c-hhhhHHHH-HHHHHHHHHhhc
Q 004839 689 YDPKRPILLNLTTDIVEE--------------------N-RYLQCKES-ALETAFLIKMME 727 (728)
Q Consensus 689 ~~~~~~~~~~~~~gH~~~--------------------~-~~~~~~~~-~~~~afl~~~l~ 727 (728)
+ ..++.+++++|+.. . .....+.. ...++||.++|+
T Consensus 294 ~---~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~ 351 (383)
T 3d59_A 294 E---RKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLG 351 (383)
T ss_dssp C---EEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred c---eEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcC
Confidence 2 23333899999852 1 22222333 357999999985
No 112
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.64 E-value=1.1e-14 Score=149.43 Aligned_cols=226 Identities=13% Similarity=0.006 Sum_probs=138.2
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC-cCccc-HHHHHHHHHCCeEEEEEcCCCCCCCCCcccccccc
Q 004839 472 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL-LDKRW-RSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRR 549 (728)
Q Consensus 472 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~-~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~ 549 (728)
++-.+|..+ .++.|++ ++.|+||++|||.... ....+ ......+++.||.|+.+|||+.++.
T Consensus 9 ~~~~~~~~~--~~y~p~~----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~---------- 72 (274)
T 2qru_A 9 QTLANGATV--TIYPTTT----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT---------- 72 (274)
T ss_dssp EECTTSCEE--EEECCSS----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS----------
T ss_pred ccccCCeeE--EEEcCCC----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC----------
Confidence 445567655 4555543 4579999999975211 12233 4455677788999999999987653
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHH---hCCCceeEEEEeCCcccchhhccCC--CCCC-
Q 004839 550 TKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAIN---CCPDLFRAVVLEVPFLDATNTLLYP--ILPL- 623 (728)
Q Consensus 550 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~---~~p~~f~a~v~~~p~~d~~~~~~~~--~~~~- 623 (728)
.....++|+.++++|+.++.. +++||+|+|+|+||.+++.++. ..+.+++++|+.+|+.|........ ..+.
T Consensus 73 -~~p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~ 150 (274)
T 2qru_A 73 -KIDHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAI 150 (274)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCC
T ss_pred -CCcHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccc
Confidence 123468999999999997643 2789999999999999999887 3577899999999988722100000 0110
Q ss_pred Cccccccc-------CCCCCHHH-----------HHHHHcc--------Cccc--ccccCCCCCeEEEEcCCCCCCCHHH
Q 004839 624 IAADYEEF-------GYPGDIDD-----------FHAIRNY--------SPYD--NIQKDVLYPAVLVTSSFNTRFGVWE 675 (728)
Q Consensus 624 ~~~~~~~~-------g~p~~~~~-----------~~~~~~~--------sP~~--~i~~~~~~P~lli~g~~D~~Vp~~~ 675 (728)
.......+ ........ ...+... .++. .+.. + .|+|+++|+.|..++..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-l-pP~li~~G~~D~~~~~~~ 228 (274)
T 2qru_A 151 SAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKT-F-PPCFSTASSSDEEVPFRY 228 (274)
T ss_dssp CSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHT-S-CCEEEEEETTCSSSCTHH
T ss_pred cHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcC-C-CCEEEEEecCCCCcCHHH
Confidence 00000000 00000000 0011100 0111 1222 4 689999999999899989
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCCCCCCch---hhhHHHHHHHHHHHHH
Q 004839 676 AAKWVARVRESTIYDPKRPILLNLTTDIVEENR---YLQCKESALETAFLIK 724 (728)
Q Consensus 676 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~~~~afl~~ 724 (728)
++++.+++.. ..+.++++++|++... ....+......+||.+
T Consensus 229 ~~~l~~~~~~-------~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 229 SKKIGRTIPE-------STFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp HHHHHHHSTT-------CEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCC-------cEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 9888887753 1233379999997431 2222335556788865
No 113
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.63 E-value=3e-15 Score=146.44 Aligned_cols=193 Identities=13% Similarity=0.056 Sum_probs=129.5
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHH--HHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRS--ELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKK 552 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~--~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~ 552 (728)
.||.++++..+.|++ +++.|+||++||+.+.. ..|.. ....|+++||.|+.+|+||+|.............
T Consensus 14 ~~g~~l~~~~~~p~~---~~~~~~vv~~hG~~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~-- 86 (210)
T 1imj_A 14 VQGQALFFREALPGS---GQARFSVLLLHGIRFSS--ETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGE-- 86 (210)
T ss_dssp ETTEEECEEEEECSS---SCCSCEEEECCCTTCCH--HHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTS--
T ss_pred eCCeEEEEEEeCCCC---CCCCceEEEECCCCCcc--ceeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCcchhhh--
Confidence 389999998887764 23568999999976543 34555 4788999999999999999986533321110000
Q ss_pred CCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccC
Q 004839 553 LNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFG 632 (728)
Q Consensus 553 ~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g 632 (728)
....+|+.+.++.+ +.++++++|+|+||.+++.++.++|++++++|+.+|..... +
T Consensus 87 ~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~-----------------~- 142 (210)
T 1imj_A 87 LAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK-----------------I- 142 (210)
T ss_dssp CCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG-----------------S-
T ss_pred cchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc-----------------c-
Confidence 00114555555443 34689999999999999999999999999999998864311 0
Q ss_pred CCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhH
Q 004839 633 YPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQC 712 (728)
Q Consensus 633 ~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 712 (728)
....+.+ ++.|+++++|..|. +|+..+.++ +.+.. ..+..++++||.... ...-
T Consensus 143 ---------------~~~~~~~-~~~p~l~i~g~~D~-~~~~~~~~~-~~~~~-------~~~~~~~~~~H~~~~-~~~~ 196 (210)
T 1imj_A 143 ---------------NAANYAS-VKTPALIVYGDQDP-MGQTSFEHL-KQLPN-------HRVLIMKGAGHPCYL-DKPE 196 (210)
T ss_dssp ---------------CHHHHHT-CCSCEEEEEETTCH-HHHHHHHHH-TTSSS-------EEEEEETTCCTTHHH-HCHH
T ss_pred ---------------cchhhhh-CCCCEEEEEcCccc-CCHHHHHHH-hhCCC-------CCEEEecCCCcchhh-cCHH
Confidence 0111233 68899999999999 998888777 54432 233337899997432 1111
Q ss_pred HHHHHHHHHHHH
Q 004839 713 KESALETAFLIK 724 (728)
Q Consensus 713 ~~~~~~~afl~~ 724 (728)
.......+||.+
T Consensus 197 ~~~~~i~~fl~~ 208 (210)
T 1imj_A 197 EWHTGLLDFLQG 208 (210)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 223445677754
No 114
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.63 E-value=5.1e-15 Score=149.38 Aligned_cols=210 Identities=14% Similarity=0.087 Sum_probs=134.4
Q ss_pred cEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004839 497 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 576 (728)
Q Consensus 497 P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 576 (728)
|+||++||..+.. ..|......|+++||.|+.+|+||+|.+... .....+++++.+.+..++++-.. .++
T Consensus 5 ~~vv~lHG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~l~~-~~~ 74 (258)
T 3dqz_A 5 HHFVLVHNAYHGA--WIWYKLKPLLESAGHRVTAVELAASGIDPRP-------IQAVETVDEYSKPLIETLKSLPE-NEE 74 (258)
T ss_dssp CEEEEECCTTCCG--GGGTTHHHHHHHTTCEEEEECCTTSTTCSSC-------GGGCCSHHHHHHHHHHHHHTSCT-TCC
T ss_pred CcEEEECCCCCcc--ccHHHHHHHHHhCCCEEEEecCCCCcCCCCC-------CCccccHHHhHHHHHHHHHHhcc-cCc
Confidence 8999999986644 4577788999999999999999999976332 11225777777777777765322 378
Q ss_pred EEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc--------cCCCCCCCcccc--------------------
Q 004839 577 LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL--------LYPILPLIAADY-------------------- 628 (728)
Q Consensus 577 i~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~--------~~~~~~~~~~~~-------------------- 628 (728)
+.++|||+||++++.++.++|++++++|+.+|........ ......+.....
T Consensus 75 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T 3dqz_A 75 VILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFM 154 (258)
T ss_dssp EEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHH
T ss_pred eEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHH
Confidence 9999999999999999999999999999988854322100 000000000000
Q ss_pred cc-cCCCCCHHHHHHHH-cc-------------CcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCc
Q 004839 629 EE-FGYPGDIDDFHAIR-NY-------------SPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKR 693 (728)
Q Consensus 629 ~~-~g~p~~~~~~~~~~-~~-------------sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~ 693 (728)
.. +......+....+. .. .+...... .++|+++|+|+.|..+|+..+.++.+.+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~------- 226 (258)
T 3dqz_A 155 KARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGY-GSVQRVYVMSSEDKAIPCDFIRWMIDNFNVS------- 226 (258)
T ss_dssp HHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTG-GGSCEEEEEETTCSSSCHHHHHHHHHHSCCS-------
T ss_pred HHHhhccCCHHHHHHHHHhccCCchhhhhhhcccccccccc-ccCCEEEEECCCCeeeCHHHHHHHHHhCCcc-------
Confidence 00 00011111111111 11 22222222 3689999999999999999999988887542
Q ss_pred cEEEEcCCCCCCCc-hhhhHHHHHHHHHHHHHhh
Q 004839 694 PILLNLTTDIVEEN-RYLQCKESALETAFLIKMM 726 (728)
Q Consensus 694 ~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~~~l 726 (728)
.+...+++||.... ....+ .....+|+.++|
T Consensus 227 ~~~~~~~~gH~~~~~~p~~~--~~~i~~fl~~~~ 258 (258)
T 3dqz_A 227 KVYEIDGGDHMVMLSKPQKL--FDSLSAIATDYM 258 (258)
T ss_dssp CEEEETTCCSCHHHHSHHHH--HHHHHHHHHHTC
T ss_pred cEEEcCCCCCchhhcChHHH--HHHHHHHHHHhC
Confidence 23337899997433 23332 344678888765
No 115
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.63 E-value=7.1e-15 Score=155.24 Aligned_cols=200 Identities=11% Similarity=0.039 Sum_probs=132.9
Q ss_pred EEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccH-------HHHHHHHHCCeEEEEEcCCCCCCCCCcccccc----
Q 004839 479 SVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWR-------SELKSLLDRGWVVAFADVRGGGGGGKKWHHDG---- 547 (728)
Q Consensus 479 ~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~-------~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~---- 547 (728)
.+.+.++.|.+. +.|.||++||+.... ..|. .....|+++||.|+.+|+||+|..+..-....
T Consensus 49 ~~~~~~~~p~~~----~~~~vvl~HG~g~~~--~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~ 122 (328)
T 1qlw_A 49 QMYVRYQIPQRA----KRYPITLIHGCCLTG--MTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKL 122 (328)
T ss_dssp CEEEEEEEETTC----CSSCEEEECCTTCCG--GGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHT
T ss_pred eEEEEEEccCCC----CCccEEEEeCCCCCC--CccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccc
Confidence 345555556531 236689999975433 3454 36788999999999999999997654311100
Q ss_pred ------------------------cc-CC---------CCCcHHH------------------HHHHHHHHHHcCCCCCC
Q 004839 548 ------------------------RR-TK---------KLNSIKD------------------FISCARFLIEKEIVKEH 575 (728)
Q Consensus 548 ------------------------~~-~~---------~~~~~~D------------------~~~~~~~l~~~~~~d~~ 575 (728)
.+ .+ ....+++ +.+++..++++- +
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~----~ 198 (328)
T 1qlw_A 123 GKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL----D 198 (328)
T ss_dssp TSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH----T
T ss_pred cccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh----C
Confidence 00 00 0001333 555666666542 3
Q ss_pred cEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccC
Q 004839 576 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKD 655 (728)
Q Consensus 576 ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~ 655 (728)
++.++|||+||.+++.++.++|++++++|+..|... . .+ ....+.
T Consensus 199 ~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~---------------------~-------------~~-~~~~~~ 243 (328)
T 1qlw_A 199 GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC---------------------P-------------KP-EDVKPL 243 (328)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC---------------------C-------------CG-GGCGGG
T ss_pred CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC---------------------C-------------CH-HHHhhc
Confidence 899999999999999999999999999999887430 0 00 111122
Q ss_pred CCCCeEEEEcCCCCCCCH-----HHHHHHHHHHHhCCCCCCCccEEEEcCCC-----CCCCchhhhHHHHHHHHHHHHHh
Q 004839 656 VLYPAVLVTSSFNTRFGV-----WEAAKWVARVRESTIYDPKRPILLNLTTD-----IVEENRYLQCKESALETAFLIKM 725 (728)
Q Consensus 656 ~~~P~lli~g~~D~~Vp~-----~~~~~~~~~L~~~~~~~~~~~~~~~~~~g-----H~~~~~~~~~~~~~~~~afl~~~ 725 (728)
++.|+|+++|+.|..+|+ .++.++++++++++.+ ..++.++++| |......+..+......+||.++
T Consensus 244 ~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~---~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~ 320 (328)
T 1qlw_A 244 TSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGK---GQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRN 320 (328)
T ss_dssp TTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCC---EEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCC---ceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhc
Confidence 568999999999999996 9999999999987743 2333367555 97644222333455678999887
Q ss_pred h
Q 004839 726 M 726 (728)
Q Consensus 726 l 726 (728)
+
T Consensus 321 ~ 321 (328)
T 1qlw_A 321 T 321 (328)
T ss_dssp C
T ss_pred c
Confidence 6
No 116
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.63 E-value=1.1e-14 Score=152.02 Aligned_cols=219 Identities=16% Similarity=0.047 Sum_probs=139.3
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.+|..+.+... ++.|+||++||..+.. ..|......|++ ||.|+.+|+||+|.+.. .....
T Consensus 55 ~~~~~~~~~~~--------g~~p~vv~lhG~~~~~--~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~--------~~~~~ 115 (314)
T 3kxp_A 55 IGRITLNVREK--------GSGPLMLFFHGITSNS--AVFEPLMIRLSD-RFTTIAVDQRGHGLSDK--------PETGY 115 (314)
T ss_dssp CSSCEEEEEEE--------CCSSEEEEECCTTCCG--GGGHHHHHTTTT-TSEEEEECCTTSTTSCC--------CSSCC
T ss_pred ECCEEEEEEec--------CCCCEEEEECCCCCCH--HHHHHHHHHHHc-CCeEEEEeCCCcCCCCC--------CCCCC
Confidence 47777765432 2258999999976543 456666777766 79999999999997641 12335
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhcc------CCCCCCC---c
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLL------YPILPLI---A 625 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------~~~~~~~---~ 625 (728)
+++|+.+.+..++++- +.++++++|+|+||++++.++.++|++++++|+.+|...+..... ....+.. .
T Consensus 116 ~~~~~~~dl~~~l~~l--~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (314)
T 3kxp_A 116 EANDYADDIAGLIRTL--ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDI 193 (314)
T ss_dssp SHHHHHHHHHHHHHHH--TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSH
T ss_pred CHHHHHHHHHHHHHHh--CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCH
Confidence 7788888777777542 337999999999999999999999999999999988654332100 0000000 0
Q ss_pred ccc----cccCCCCCHHHHHHHH---------------------------ccCcccccccCCCCCeEEEEcCCCCCCCHH
Q 004839 626 ADY----EEFGYPGDIDDFHAIR---------------------------NYSPYDNIQKDVLYPAVLVTSSFNTRFGVW 674 (728)
Q Consensus 626 ~~~----~~~g~p~~~~~~~~~~---------------------------~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~ 674 (728)
... .........+....+. ..+....+.+ +++|+|+++|+.|..+|+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~Lii~G~~D~~~~~~ 272 (314)
T 3kxp_A 194 KAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRD-VTKPVLIVRGESSKLVSAA 272 (314)
T ss_dssp HHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHH-CCSCEEEEEETTCSSSCHH
T ss_pred HHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhc-CCCCEEEEecCCCccCCHH
Confidence 000 0000000111111111 0133344555 8999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHH
Q 004839 675 EAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLI 723 (728)
Q Consensus 675 ~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~ 723 (728)
.+.++++.+... .+..++++||.... .+.-.......+||.
T Consensus 273 ~~~~~~~~~~~~-------~~~~~~g~gH~~~~-e~~~~~~~~i~~fl~ 313 (314)
T 3kxp_A 273 ALAKTSRLRPDL-------PVVVVPGADHYVNE-VSPEITLKAITNFID 313 (314)
T ss_dssp HHHHHHHHCTTS-------CEEEETTCCSCHHH-HCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCc-------eEEEcCCCCCcchh-hCHHHHHHHHHHHHh
Confidence 999999888442 23337999998533 112223444567775
No 117
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.62 E-value=3.3e-14 Score=157.13 Aligned_cols=229 Identities=13% Similarity=0.042 Sum_probs=140.5
Q ss_pred EEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccc
Q 004839 469 QYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGR 548 (728)
Q Consensus 469 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~ 548 (728)
.+.+.+.||..+.+... +..|+||++||+.+.. ..|......|+++||.|+.+|+||+|.+....
T Consensus 5 ~~~~~~~dG~~l~y~~~--------G~gp~VV~lHG~~~~~--~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~----- 69 (456)
T 3vdx_A 5 TVGQENSTSIDLYYEDH--------GTGVPVVLIHGFPLSG--HSWERQSAALLDAGYRVITYDRRGFGQSSQPT----- 69 (456)
T ss_dssp EEEEETTEEEEEEEEEE--------SSSEEEEEECCTTCCG--GGGTTHHHHHHHHTEEEEEECCTTSTTSCCCS-----
T ss_pred eecccccCCeEEEEEEe--------CCCCEEEEECCCCCcH--HHHHHHHHHHHHCCcEEEEECCCCCCCCCCCC-----
Confidence 45567788888764321 2358999999986644 45677788899999999999999999764321
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC-CCceeEEEEeCCcccchhhccCCCCCC-Cc-
Q 004839 549 RTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC-PDLFRAVVLEVPFLDATNTLLYPILPL-IA- 625 (728)
Q Consensus 549 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~f~a~v~~~p~~d~~~~~~~~~~~~-~~- 625 (728)
...+++++.+.+..+++. ++.++++++|+|+||++++.++.++ |++++++|+.+|............... ..
T Consensus 70 ---~~~s~~~~a~dl~~~l~~--l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~ 144 (456)
T 3vdx_A 70 ---TGYDYDTFAADLNTVLET--LDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQE 144 (456)
T ss_dssp ---SCCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHH
T ss_pred ---CCCCHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHH
Confidence 224566666666655543 2457899999999999988888776 999999999998765432110000000 00
Q ss_pred ------------------ccccc-cC------CCCCHHHHHHHH------------------ccCcccccccCCCCCeEE
Q 004839 626 ------------------ADYEE-FG------YPGDIDDFHAIR------------------NYSPYDNIQKDVLYPAVL 662 (728)
Q Consensus 626 ------------------~~~~~-~g------~p~~~~~~~~~~------------------~~sP~~~i~~~~~~P~ll 662 (728)
..... +. .....+....+. ..+....+.+ ++.|+|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~-i~~PvLi 223 (456)
T 3vdx_A 145 FFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPR-IDVPALI 223 (456)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTT-CCSCCEE
T ss_pred HHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhh-CCCCEEE
Confidence 00000 00 011111111100 0122234454 8999999
Q ss_pred EEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHHHhh
Q 004839 663 VTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN-RYLQCKESALETAFLIKMM 726 (728)
Q Consensus 663 i~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~~~l 726 (728)
|+|+.|..||+.+..+.++++.. + ..+.+++++||.... .... ......+||.+++
T Consensus 224 I~G~~D~~vp~~~~~~~l~~~~~-~-----~~~~~i~gagH~~~~e~p~~--v~~~I~~FL~~~l 280 (456)
T 3vdx_A 224 LHGTGDRTLPIENTARVFHKALP-S-----AEYVEVEGAPHGLLWTHAEE--VNTALLAFLAKAL 280 (456)
T ss_dssp EEETTCSSSCGGGTHHHHHHHCT-T-----SEEEEETTCCSCTTTTTHHH--HHHHHHHHHHHHH
T ss_pred EEeCCCCCcCHHHHHHHHHHHCC-C-----ceEEEeCCCCCcchhhCHHH--HHHHHHHHHHHhh
Confidence 99999999999844444444321 1 233337999998544 3322 3444678888765
No 118
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.62 E-value=2.3e-14 Score=147.07 Aligned_cols=220 Identities=15% Similarity=0.064 Sum_probs=134.7
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCC
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKL 553 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~ 553 (728)
..||.++.+... + +.|.||++||..++. ..|......|+++||.|+.+|+||+|.+... ...
T Consensus 9 ~~~g~~l~y~~~---g-----~g~pvvllHG~~~~~--~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~--------~~~ 70 (277)
T 1brt_A 9 NSTSIDLYYEDH---G-----TGQPVVLIHGFPLSG--HSWERQSAALLDAGYRVITYDRRGFGQSSQP--------TTG 70 (277)
T ss_dssp TTEEEEEEEEEE---C-----SSSEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCC--------SSC
T ss_pred cCCCcEEEEEEc---C-----CCCeEEEECCCCCcH--HHHHHHHHHHhhCCCEEEEeCCCCCCCCCCC--------CCC
Confidence 457777654322 1 124488999976643 5678888999999999999999999976432 122
Q ss_pred CcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCC-ceeEEEEeCCcccchhh-ccCCC--CCCC-----
Q 004839 554 NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPD-LFRAVVLEVPFLDATNT-LLYPI--LPLI----- 624 (728)
Q Consensus 554 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~-~f~a~v~~~p~~d~~~~-~~~~~--~~~~----- 624 (728)
.+++++.+.+..++++ .+.+++.++|||+||.+++.++.++|+ +++++|+.+|....... ..... .+..
T Consensus 71 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (277)
T 1brt_A 71 YDYDTFAADLNTVLET--LDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGI 148 (277)
T ss_dssp CSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHH
Confidence 4666666666666543 133689999999999999999999999 99999998874322100 00000 0000
Q ss_pred --------ccccc-----cc------CCCCCHHHHHHHH------------------ccCcccccccCCCCCeEEEEcCC
Q 004839 625 --------AADYE-----EF------GYPGDIDDFHAIR------------------NYSPYDNIQKDVLYPAVLVTSSF 667 (728)
Q Consensus 625 --------~~~~~-----~~------g~p~~~~~~~~~~------------------~~sP~~~i~~~~~~P~lli~g~~ 667 (728)
..... .+ +.....+..+.+. ..+....+.+ ++.|+|+|+|+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lii~G~~ 227 (277)
T 1brt_A 149 VAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPR-IDVPALILHGTG 227 (277)
T ss_dssp HHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGG-CCSCEEEEEETT
T ss_pred HHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhccc-CCCCeEEEecCC
Confidence 00000 01 1111111111110 1112234455 899999999999
Q ss_pred CCCCCHHHH-HHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHH
Q 004839 668 NTRFGVWEA-AKWVARVRESTIYDPKRPILLNLTTDIVEEN-RYLQCKESALETAFLI 723 (728)
Q Consensus 668 D~~Vp~~~~-~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~ 723 (728)
|..+|+..+ .++.+.+.. ..+.+.+++||.... .... ......+||.
T Consensus 228 D~~~~~~~~~~~~~~~~~~-------~~~~~i~~~gH~~~~e~p~~--~~~~i~~fl~ 276 (277)
T 1brt_A 228 DRTLPIENTARVFHKALPS-------AEYVEVEGAPHGLLWTHAEE--VNTALLAFLA 276 (277)
T ss_dssp CSSSCGGGTHHHHHHHCTT-------SEEEEETTCCTTHHHHTHHH--HHHHHHHHHH
T ss_pred CccCChHHHHHHHHHHCCC-------CcEEEeCCCCcchhhhCHHH--HHHHHHHHHh
Confidence 999999888 777776643 223337999997532 2222 2334567764
No 119
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.62 E-value=3.1e-14 Score=145.65 Aligned_cols=120 Identities=20% Similarity=0.224 Sum_probs=88.4
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCC
Q 004839 472 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTK 551 (728)
Q Consensus 472 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~ 551 (728)
+.+.||.++.+...-| .+.|.||++||..+.. ..|......|+++||.|+.+|+||+|.+... .
T Consensus 3 ~~~~~g~~l~y~~~g~------~~~~~vvllHG~~~~~--~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~--------~ 66 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGP------RDGLPVVFHHGWPLSA--DDWDNQMLFFLSHGYRVIAHDRRGHGRSDQP--------S 66 (275)
T ss_dssp EECTTSCEEEEEEESC------TTSCEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCC--------S
T ss_pred EEccCCCEEEEEEcCC------CCCceEEEECCCCCch--hhHHHHHHHHHHCCceEEEEcCCcCCCCCCC--------C
Confidence 5677898887544311 1236799999976543 4577788899999999999999999976432 1
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC-CCceeEEEEeCCc
Q 004839 552 KLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC-PDLFRAVVLEVPF 609 (728)
Q Consensus 552 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~f~a~v~~~p~ 609 (728)
...+++++.+.+..+++.- +.+++.++||||||.+++.++.++ |++++++|+.++.
T Consensus 67 ~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 123 (275)
T 1a88_A 67 TGHDMDTYAADVAALTEAL--DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAV 123 (275)
T ss_dssp SCCSHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCC
T ss_pred CCCCHHHHHHHHHHHHHHc--CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCC
Confidence 1246666666666555432 336899999999999998877766 9999999998864
No 120
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.61 E-value=2.7e-14 Score=146.35 Aligned_cols=120 Identities=19% Similarity=0.223 Sum_probs=89.0
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCC
Q 004839 472 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTK 551 (728)
Q Consensus 472 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~ 551 (728)
+...||.+|.+...-| ...|.||++||..+.. ..|......|+++||.|+++|+||+|.+... .
T Consensus 4 ~~~~~g~~l~y~~~g~------~~~~~vvllHG~~~~~--~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~--------~ 67 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGP------RDAPVIHFHHGWPLSA--DDWDAQLLFFLAHGYRVVAHDRRGHGRSSQV--------W 67 (276)
T ss_dssp EECTTSCEEEEEEESC------TTSCEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCC--------S
T ss_pred EECCCCcEEEEEecCC------CCCCeEEEECCCCcch--hHHHHHHHHHHhCCCEEEEecCCCCCCCCCC--------C
Confidence 5677898887644311 1236799999976543 4677888899999999999999999976432 1
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC-CCceeEEEEeCCc
Q 004839 552 KLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC-PDLFRAVVLEVPF 609 (728)
Q Consensus 552 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~f~a~v~~~p~ 609 (728)
...+++++.+.+..++++ .+.+++.++|||+||.+++.++.++ |++++++|+.++.
T Consensus 68 ~~~~~~~~~~d~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 124 (276)
T 1zoi_A 68 DGHDMDHYADDVAAVVAH--LGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAV 124 (276)
T ss_dssp SCCSHHHHHHHHHHHHHH--HTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCC
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCC
Confidence 124666666666655543 1336899999999999999877776 9999999998864
No 121
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.61 E-value=1.5e-14 Score=146.84 Aligned_cols=221 Identities=14% Similarity=0.089 Sum_probs=133.4
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHH-CCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 476 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 476 dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~-~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
+|..+.+... ++.|.||++||..+.. ..|......|++ +||.|+.+|+||+|.....-. .
T Consensus 9 ~g~~l~y~~~--------g~~~~vv~lhG~~~~~--~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~---------~ 69 (272)
T 3fsg_A 9 TRSNISYFSI--------GSGTPIIFLHGLSLDK--QSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP---------S 69 (272)
T ss_dssp CTTCCEEEEE--------CCSSEEEEECCTTCCH--HHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS---------C
T ss_pred cCCeEEEEEc--------CCCCeEEEEeCCCCcH--HHHHHHHHHHhccCceEEEEecCCCCCCCCCCCC---------C
Confidence 6767664321 2347899999976533 345666666777 799999999999997532211 4
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccC-CCCCC----------
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLY-PILPL---------- 623 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~-~~~~~---------- 623 (728)
+++++.+.+..++++- .+.+++.++|+|+||.+++.++.++|++++++|+.+|.......... .....
T Consensus 70 ~~~~~~~~~~~~l~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (272)
T 3fsg_A 70 TSDNVLETLIEAIEEI-IGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVE 148 (272)
T ss_dssp SHHHHHHHHHHHHHHH-HTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCT
T ss_pred CHHHHHHHHHHHHHHH-hCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhccc
Confidence 5666666555555431 23478999999999999999999999999999999987643221100 00000
Q ss_pred Ccc---cccccCCCCCHHHH-------------------HHHHccCcc-----cccccCCCCCeEEEEcCCCCCCCHHHH
Q 004839 624 IAA---DYEEFGYPGDIDDF-------------------HAIRNYSPY-----DNIQKDVLYPAVLVTSSFNTRFGVWEA 676 (728)
Q Consensus 624 ~~~---~~~~~g~p~~~~~~-------------------~~~~~~sP~-----~~i~~~~~~P~lli~g~~D~~Vp~~~~ 676 (728)
... .+............ ..+...... ..+.+ ++.|+|+|+|+.|..||+..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~~D~~~~~~~~ 227 (272)
T 3fsg_A 149 NKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNIN-YQFPFKIMVGRNDQVVGYQEQ 227 (272)
T ss_dssp TGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCC-CSSCEEEEEETTCTTTCSHHH
T ss_pred CHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhcc-CCCCEEEEEeCCCCcCCHHHH
Confidence 000 00000000000111 111111111 12243 799999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHh
Q 004839 677 AKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKM 725 (728)
Q Consensus 677 ~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~ 725 (728)
.++.+.+.. ..+..++++||.... ...-.......+||.+.
T Consensus 228 ~~~~~~~~~-------~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 268 (272)
T 3fsg_A 228 LKLINHNEN-------GEIVLLNRTGHNLMI-DQREAVGFHFDLFLDEL 268 (272)
T ss_dssp HHHHTTCTT-------EEEEEESSCCSSHHH-HTHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC-------CeEEEecCCCCCchh-cCHHHHHHHHHHHHHHh
Confidence 888776642 233337899998533 12222234467888764
No 122
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.61 E-value=1.1e-14 Score=164.46 Aligned_cols=127 Identities=17% Similarity=0.195 Sum_probs=94.9
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCcccc
Q 004839 466 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHH 545 (728)
Q Consensus 466 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~ 545 (728)
..+...+...||.++++... ++.|+||++||+.+.. ..|......|+++||.|+.+|+||+|.+...
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~--------g~~p~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~--- 302 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVEL--------GSGPAVCLCHGFPESW--YSWRYQIPALAQAGYRVLAMDMKGYGESSAP--- 302 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEE--------CSSSEEEEECCTTCCG--GGGTTHHHHHHHTTCEEEEECCTTSTTSCCC---
T ss_pred ccceeEEEeCCCcEEEEEEc--------CCCCEEEEEeCCCCch--hHHHHHHHHHHhCCCEEEEecCCCCCCCCCC---
Confidence 44556667779988875432 2458999999987644 4577788899999999999999999976332
Q ss_pred ccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 546 DGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 546 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
......+++++.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+.+|..
T Consensus 303 ---~~~~~~~~~~~~~d~~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 362 (555)
T 3i28_A 303 ---PEIEEYCMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF 362 (555)
T ss_dssp ---SCGGGGSHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred ---CCcccccHHHHHHHHHHHHHH--cCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCC
Confidence 111123466666655555543 244689999999999999999999999999999988753
No 123
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.60 E-value=1.2e-14 Score=150.59 Aligned_cols=222 Identities=12% Similarity=0.032 Sum_probs=139.9
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCc
Q 004839 476 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNS 555 (728)
Q Consensus 476 dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~ 555 (728)
+|..+.+... ++.|+||++||..+.. ..|......|+++||.|+.+|+||+|.+... ....+
T Consensus 17 ~g~~l~~~~~--------g~~~~vv~~HG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~--------~~~~~ 78 (309)
T 3u1t_A 17 EGATIAYVDE--------GSGQPVLFLHGNPTSS--YLWRNIIPYVVAAGYRAVAPDLIGMGDSAKP--------DIEYR 78 (309)
T ss_dssp TTEEEEEEEE--------ECSSEEEEECCTTCCG--GGGTTTHHHHHHTTCEEEEECCTTSTTSCCC--------SSCCC
T ss_pred CCeEEEEEEc--------CCCCEEEEECCCcchh--hhHHHHHHHHHhCCCEEEEEccCCCCCCCCC--------CcccC
Confidence 7878765432 2247899999976543 4566677888899999999999999975331 12357
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchh-----------------hccC
Q 004839 556 IKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN-----------------TLLY 618 (728)
Q Consensus 556 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~-----------------~~~~ 618 (728)
++|+.+.+..+++.- +.+++.++|||+||++++.++.++|++++++|+.+|...... .+..
T Consensus 79 ~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (309)
T 3u1t_A 79 LQDHVAYMDGFIDAL--GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRT 156 (309)
T ss_dssp HHHHHHHHHHHHHHH--TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHc--CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhc
Confidence 788887777777542 346899999999999999999999999999999887654220 0000
Q ss_pred CCCC---------CCcccccc--cCCCCCHHHHHHHHc-----------------cC--------------cccccccCC
Q 004839 619 PILP---------LIAADYEE--FGYPGDIDDFHAIRN-----------------YS--------------PYDNIQKDV 656 (728)
Q Consensus 619 ~~~~---------~~~~~~~~--~g~p~~~~~~~~~~~-----------------~s--------------P~~~i~~~~ 656 (728)
.... ........ .......+..+.+.. .. ....+.+ +
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i 235 (309)
T 3u1t_A 157 ADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMA-S 235 (309)
T ss_dssp TTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHH-C
T ss_pred cchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhccc-C
Confidence 0000 00000000 000111111111111 00 0012344 7
Q ss_pred CCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 004839 657 LYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMM 726 (728)
Q Consensus 657 ~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l 726 (728)
++|+|+|+|+.|..+|+..+.++.+.+.... .+. .+++||.... ....+......+||.+..
T Consensus 236 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~------~~~-~~~~gH~~~~-~~p~~~~~~i~~fl~~~~ 297 (309)
T 3u1t_A 236 PIPKLLFHAEPGALAPKPVVDYLSENVPNLE------VRF-VGAGTHFLQE-DHPHLIGQGIADWLRRNK 297 (309)
T ss_dssp CSCEEEEEEEECSSSCHHHHHHHHHHSTTEE------EEE-EEEESSCHHH-HCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHhhCCCCE------EEE-ecCCcccchh-hCHHHHHHHHHHHHHhcc
Confidence 8999999999999999999989988875422 223 5899996432 222223444678888764
No 124
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.59 E-value=1.1e-13 Score=142.37 Aligned_cols=117 Identities=22% Similarity=0.263 Sum_probs=85.0
Q ss_pred ECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCC
Q 004839 473 PSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKK 552 (728)
Q Consensus 473 ~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~ 552 (728)
...||.++++... ++.|.||++||.++.. ..|......|+++||.|+.+|+||+|.+.... .
T Consensus 12 ~~~~g~~l~y~~~--------G~g~~vvllHG~~~~~--~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--------~ 73 (281)
T 3fob_A 12 ENQAPIEIYYEDH--------GTGKPVVLIHGWPLSG--RSWEYQVPALVEAGYRVITYDRRGFGKSSQPW--------E 73 (281)
T ss_dssp ETTEEEEEEEEEE--------SSSEEEEEECCTTCCG--GGGTTTHHHHHHTTEEEEEECCTTSTTSCCCS--------S
T ss_pred CCCCceEEEEEEC--------CCCCeEEEECCCCCcH--HHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCc--------c
Confidence 4567766654321 2236688899987644 45677788899999999999999999764321 2
Q ss_pred CCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHh-CCCceeEEEEeCCc
Q 004839 553 LNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC-CPDLFRAVVLEVPF 609 (728)
Q Consensus 553 ~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~-~p~~f~a~v~~~p~ 609 (728)
..+++++.+.+..+++.- +.+++.++|||+||.+++.++.+ .|++++++|+..+.
T Consensus 74 ~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~ 129 (281)
T 3fob_A 74 GYEYDTFTSDLHQLLEQL--ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAV 129 (281)
T ss_dssp CCSHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred ccCHHHHHHHHHHHHHHc--CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCC
Confidence 346777777777777543 33689999999999877765554 58999999988764
No 125
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.59 E-value=6.5e-15 Score=149.83 Aligned_cols=205 Identities=11% Similarity=0.062 Sum_probs=130.1
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.+|.++.+... ++.|+||++||..+.. ..|......|++ ||.|+.+|+||+|.+... ......
T Consensus 10 ~~~~~~~y~~~--------g~~~~vv~~HG~~~~~--~~~~~~~~~L~~-~~~vi~~d~~G~G~s~~~------~~~~~~ 72 (278)
T 3oos_A 10 TPRGKFEYFLK--------GEGPPLCVTHLYSEYN--DNGNTFANPFTD-HYSVYLVNLKGCGNSDSA------KNDSEY 72 (278)
T ss_dssp ETTEEEEEEEE--------CSSSEEEECCSSEECC--TTCCTTTGGGGG-TSEEEEECCTTSTTSCCC------SSGGGG
T ss_pred cCCceEEEEec--------CCCCeEEEEcCCCcch--HHHHHHHHHhhc-CceEEEEcCCCCCCCCCC------CCcccC
Confidence 35666664321 2347899999976543 235555667766 999999999999976322 111224
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCC-----CCCc---c
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPIL-----PLIA---A 626 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~-----~~~~---~ 626 (728)
+++|+.+.+..++++- +.+++.++|||+||.+++.++.++|++++++|+.+|............. +... .
T Consensus 73 ~~~~~~~~~~~~~~~l--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (278)
T 3oos_A 73 SMTETIKDLEAIREAL--YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVS 150 (278)
T ss_dssp SHHHHHHHHHHHHHHT--TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHH
T ss_pred cHHHHHHHHHHHHHHh--CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHH
Confidence 6788887777777653 4468999999999999999999999999999999998772110000000 0000 0
Q ss_pred cccc--------------------------------cCCCC----CHHHHHHHH-----ccCcccccccCCCCCeEEEEc
Q 004839 627 DYEE--------------------------------FGYPG----DIDDFHAIR-----NYSPYDNIQKDVLYPAVLVTS 665 (728)
Q Consensus 627 ~~~~--------------------------------~g~p~----~~~~~~~~~-----~~sP~~~i~~~~~~P~lli~g 665 (728)
.... +..+. .......+. .++....+.+ +++|+|+|+|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~l~i~g 229 (278)
T 3oos_A 151 IMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKF-VKIPSFIYCG 229 (278)
T ss_dssp HHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTT-CCSCEEEEEE
T ss_pred HHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhC-CCCCEEEEEe
Confidence 0000 00000 001111121 2233344454 8999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCC
Q 004839 666 SFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEE 706 (728)
Q Consensus 666 ~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 706 (728)
+.|..+|+..+.++++.+.. ..+..++++||...
T Consensus 230 ~~D~~~~~~~~~~~~~~~~~-------~~~~~~~~~gH~~~ 263 (278)
T 3oos_A 230 KHDVQCPYIFSCEIANLIPN-------ATLTKFEESNHNPF 263 (278)
T ss_dssp TTCSSSCHHHHHHHHHHSTT-------EEEEEETTCSSCHH
T ss_pred ccCCCCCHHHHHHHHhhCCC-------cEEEEcCCcCCCcc
Confidence 99999999999999888743 22333789999853
No 126
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.59 E-value=1.1e-13 Score=139.80 Aligned_cols=208 Identities=17% Similarity=0.154 Sum_probs=124.4
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.+|.++.+... . ++ .|.||++||..+.. ...|......|+++||.|+++|+||+|.+...- ......
T Consensus 9 ~~g~~l~~~~~-g-----~~-~~~vvllHG~~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-----~~~~~~ 75 (254)
T 2ocg_A 9 VNGVQLHYQQT-G-----EG-DHAVLLLPGMLGSG-ETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPD-----RDFPAD 75 (254)
T ss_dssp ETTEEEEEEEE-E-----CC-SEEEEEECCTTCCH-HHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSC-----CCCCTT
T ss_pred ECCEEEEEEEe-c-----CC-CCeEEEECCCCCCC-ccchHHHHHHHhhCCCeEEEECCCCCCCCCCCC-----CCCChH
Confidence 37877765432 1 12 35789999976541 245777788898999999999999999764320 111111
Q ss_pred cHHH-HHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc--cCCCCCCCcccc---
Q 004839 555 SIKD-FISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL--LYPILPLIAADY--- 628 (728)
Q Consensus 555 ~~~D-~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~--~~~~~~~~~~~~--- 628 (728)
.+.+ ..++++++.+.+ .+++.++|+|+||.+++.++.++|++++++|+.+|...+.... ..........+.
T Consensus 76 ~~~~~~~~~~~~l~~l~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (254)
T 2ocg_A 76 FFERDAKDAVDLMKALK---FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERT 152 (254)
T ss_dssp HHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHH
T ss_pred HHHHHHHHHHHHHHHhC---CCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHh
Confidence 1333 334444444433 3689999999999999999999999999999988753221100 000000000000
Q ss_pred -----cccCCCCCH----HHHHHHHcc-------CcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCC
Q 004839 629 -----EEFGYPGDI----DDFHAIRNY-------SPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPK 692 (728)
Q Consensus 629 -----~~~g~p~~~----~~~~~~~~~-------sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~ 692 (728)
..++..... ...+.+... .....+.+ +++|+|+|+|+.|..||+..+.++.+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~------ 225 (254)
T 2ocg_A 153 RKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPR-VQCPALIVHGEKDPLVPRFHADFIHKHVKGS------ 225 (254)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGG-CCSCEEEEEETTCSSSCHHHHHHHHHHSTTC------
T ss_pred HHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhc-ccCCEEEEecCCCccCCHHHHHHHHHhCCCC------
Confidence 001100000 000111111 11223444 8999999999999999999998888776532
Q ss_pred ccEEEEcCCCCCCC
Q 004839 693 RPILLNLTTDIVEE 706 (728)
Q Consensus 693 ~~~~~~~~~gH~~~ 706 (728)
.+.+++++||...
T Consensus 226 -~~~~~~~~gH~~~ 238 (254)
T 2ocg_A 226 -RLHLMPEGKHNLH 238 (254)
T ss_dssp -EEEEETTCCTTHH
T ss_pred -EEEEcCCCCCchh
Confidence 2333799999753
No 127
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.59 E-value=5.8e-14 Score=142.35 Aligned_cols=211 Identities=14% Similarity=0.085 Sum_probs=133.7
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCC
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 573 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 573 (728)
...|+||++||..+.. ..|......|+++||.|+.+|+||+|.+... .....+++++.+.+..++++- -+
T Consensus 10 ~~~~~vvllHG~~~~~--~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~-------~~~~~~~~~~~~~~~~~l~~l-~~ 79 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGA--WCWYKIVALMRSSGHNVTALDLGASGINPKQ-------ALQIPNFSDYLSPLMEFMASL-PA 79 (267)
T ss_dssp CCCCEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEEECCTTSTTCSCC-------GGGCCSHHHHHHHHHHHHHTS-CT
T ss_pred CCCCeEEEECCCCCCc--chHHHHHHHHHhcCCeEEEeccccCCCCCCc-------CCccCCHHHHHHHHHHHHHhc-CC
Confidence 3458999999987643 5677888999999999999999999976433 111246777777777777543 14
Q ss_pred CCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc-------c-CCCCCCCcccc-----------------
Q 004839 574 EHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL-------L-YPILPLIAADY----------------- 628 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~-------~-~~~~~~~~~~~----------------- 628 (728)
.+++.++|||+||.+++.++.++|++++++|+.+|........ . .....+....+
T Consensus 80 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
T 3sty_A 80 NEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGP 159 (267)
T ss_dssp TSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCH
T ss_pred CCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhH
Confidence 5799999999999999999999999999999988865322100 0 00000000000
Q ss_pred ----cccCCCCCHHHHHH---------------HHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCC
Q 004839 629 ----EEFGYPGDIDDFHA---------------IRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIY 689 (728)
Q Consensus 629 ----~~~g~p~~~~~~~~---------------~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~ 689 (728)
..+......+.... +....++..... .+.|+|+|+|+.|..+|+....++.+.+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--- 235 (267)
T 3sty_A 160 KFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRY-GSVKRVFIVATENDALKKEFLKLMIEKNPPD--- 235 (267)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTG-GGSCEEEEECCCSCHHHHHHHHHHHHHSCCS---
T ss_pred HHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccc-cCCCEEEEEeCCCCccCHHHHHHHHHhCCCc---
Confidence 00000111111111 111122222222 3589999999999999999988888877431
Q ss_pred CCCccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHHH
Q 004839 690 DPKRPILLNLTTDIVEEN-RYLQCKESALETAFLIK 724 (728)
Q Consensus 690 ~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~~ 724 (728)
.+...+++||.... ....+ .....+||.+
T Consensus 236 ----~~~~i~~~gH~~~~e~p~~~--~~~i~~fl~~ 265 (267)
T 3sty_A 236 ----EVKEIEGSDHVTMMSKPQQL--FTTLLSIANK 265 (267)
T ss_dssp ----EEEECTTCCSCHHHHSHHHH--HHHHHHHHHH
T ss_pred ----eEEEeCCCCccccccChHHH--HHHHHHHHHh
Confidence 23336899997533 33332 3335677765
No 128
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.59 E-value=7.3e-15 Score=151.16 Aligned_cols=226 Identities=13% Similarity=0.029 Sum_probs=137.8
Q ss_pred CCCceEEEEEEECCC-CcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHH-CCeEEEEEcCCCCCCC
Q 004839 462 SEFYSCEQYDVPSHD-GISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLD-RGWVVAFADVRGGGGG 539 (728)
Q Consensus 462 ~~~~~~~~~~~~s~d-G~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~-~Gy~v~~~d~RG~g~~ 539 (728)
......+.+++.|.+ |.++.++++.|++..+.+++|+|++.||+.... .......+.|++ .+.+|+.+++++...+
T Consensus 8 ~~~~~~~~~~~~S~~~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~--~~~~~~~~~l~~~~~~ivV~v~~~~~~~~ 85 (278)
T 2gzs_A 8 SVFYHFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMD--RLDDELLKQLSEKTPPVIVAVGYQTNLPF 85 (278)
T ss_dssp CSSEEEEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHH--HCCHHHHHHHTTSCCCEEEEEEESSSSSC
T ss_pred CCCCceEEEEEEcCCCCceEEEEEECCCCCCCCCCCCEEEEeeChhHHH--HHHHHHHHHhccCCCeEEEEEcCCCCCcC
Confidence 455678889999887 689999999999876677899887777753211 111223355665 6888888888764211
Q ss_pred -----CCcccccc--------c----cC-CCCCcHHHHHH--HHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCc
Q 004839 540 -----GKKWHHDG--------R----RT-KKLNSIKDFIS--CARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDL 599 (728)
Q Consensus 540 -----G~~~~~~~--------~----~~-~~~~~~~D~~~--~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~ 599 (728)
+.++.... . .. .+...+.+++. .+.++.++..+|++|++|+|+||||++++.++.+ |++
T Consensus 86 ~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~ 164 (278)
T 2gzs_A 86 DLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSY 164 (278)
T ss_dssp CHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSS
T ss_pred cccccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccc
Confidence 11111100 0 00 01112333331 2223333445788999999999999999999999 999
Q ss_pred eeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCC--------
Q 004839 600 FRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRF-------- 671 (728)
Q Consensus 600 f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~V-------- 671 (728)
|+++++.+|.+.+... .....+.++.+. .. ...|+++.+|..|..+
T Consensus 165 f~~~~~~s~~~~~~~~----------------------~~~~~~~~~~~~---~~-~~~~i~l~~G~~d~~~~~~~~~~~ 218 (278)
T 2gzs_A 165 FRSYYSASPSLGRGYD----------------------ALLSRVTAVEPL---QF-CTKHLAIMEGSATQGDNRETHAVG 218 (278)
T ss_dssp CSEEEEESGGGSTTHH----------------------HHHHHHHTSCTT---TT-TTCEEEEEECCC-----------C
T ss_pred cCeEEEeCcchhcCcc----------------------hHHHHHHHhhcc---CC-CCCcEEEEecCccccccccchhhh
Confidence 9999999996432210 011112222211 11 2346778888888654
Q ss_pred CHHHHHHHHHHHHhCCCCCCCccEEE--EcCCCCCCCchhhhHHHHHHHHHHHHHh
Q 004839 672 GVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEENRYLQCKESALETAFLIKM 725 (728)
Q Consensus 672 p~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~afl~~~ 725 (728)
+..++++++++|+++|++ +.+ +++++|+..... .....+.||.++
T Consensus 219 ~~~~~~~~~~~L~~~g~~-----~~~~~~~g~~H~~~~~~----~~~~~l~fl~~~ 265 (278)
T 2gzs_A 219 VLSKIHTTLTILKDKGVN-----AVFWDFPNLGHGPMFNA----SFRQALLDISGE 265 (278)
T ss_dssp HHHHHHHHHHHHHHTTCC-----EEEEECTTCCHHHHHHH----HHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHcCCCe-----eEEEEcCCCCccchhHH----HHHHHHHHHhhC
Confidence 589999999999998853 444 788889643222 223456677653
No 129
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.59 E-value=3.2e-15 Score=151.48 Aligned_cols=211 Identities=12% Similarity=0.033 Sum_probs=131.7
Q ss_pred CccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 574 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 574 (728)
..|+||++||..+.. ..|......|++ ||.|+.+|+||+|.+...... .....+++++.+.+..+++.- +.
T Consensus 19 ~~p~vv~~HG~~~~~--~~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~ 89 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQ--SAWNRILPFFLR-DYRVVLYDLVCAGSVNPDFFD----FRRYTTLDPYVDDLLHILDAL--GI 89 (269)
T ss_dssp CSSEEEEECCTTCCG--GGGTTTGGGGTT-TCEEEEECCTTSTTSCGGGCC----TTTCSSSHHHHHHHHHHHHHT--TC
T ss_pred CCCEEEEEeCCCCcH--HHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCC----ccccCcHHHHHHHHHHHHHhc--CC
Confidence 348999999976543 445666677777 999999999999976331111 112236677777777776542 44
Q ss_pred CcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCC-CCCCC-------------ccccc-----ccCCCC
Q 004839 575 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYP-ILPLI-------------AADYE-----EFGYPG 635 (728)
Q Consensus 575 ~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~-~~~~~-------------~~~~~-----~~g~p~ 635 (728)
+++.++|||+||++++.++.++|++++++|+.+|........... ..... ..+.. ..+..
T Consensus 90 ~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 168 (269)
T 4dnp_A 90 DCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGAD- 168 (269)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSS-
T ss_pred CeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCC-
Confidence 689999999999999999999999999999999865432110000 00000 00000 00110
Q ss_pred CHH-------------------HHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEE
Q 004839 636 DID-------------------DFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPIL 696 (728)
Q Consensus 636 ~~~-------------------~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~ 696 (728)
..+ ....+...+....+.+ ++.|+|+++|+.|..+|+..+.++.+.+... ..+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~------~~~~ 241 (269)
T 4dnp_A 169 VPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGL-VKVPCHIFQTARDHSVPASVATYLKNHLGGK------NTVH 241 (269)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGG-CCSCEEEEEEESBTTBCHHHHHHHHHHSSSC------EEEE
T ss_pred ChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhcc-ccCCEEEEecCCCcccCHHHHHHHHHhCCCC------ceEE
Confidence 110 0111222344455555 8999999999999999999999998887542 1233
Q ss_pred EEcCCCCCCCc-hhhhHHHHHHHHHHHHH
Q 004839 697 LNLTTDIVEEN-RYLQCKESALETAFLIK 724 (728)
Q Consensus 697 ~~~~~gH~~~~-~~~~~~~~~~~~afl~~ 724 (728)
+.+++||.... .... ......+||.+
T Consensus 242 ~~~~~gH~~~~~~p~~--~~~~i~~fl~~ 268 (269)
T 4dnp_A 242 WLNIEGHLPHLSAPTL--LAQELRRALSH 268 (269)
T ss_dssp EEEEESSCHHHHCHHH--HHHHHHHHHC-
T ss_pred EeCCCCCCccccCHHH--HHHHHHHHHhh
Confidence 36889997533 2222 23345677654
No 130
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.58 E-value=5.2e-15 Score=149.40 Aligned_cols=207 Identities=16% Similarity=0.127 Sum_probs=122.3
Q ss_pred ccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcH----HHHHHHHHHHHHcCC
Q 004839 496 NPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSI----KDFISCARFLIEKEI 571 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~----~D~~~~~~~l~~~~~ 571 (728)
.|.||++||..++. ..|......|+++||.|+.+|+||+|..... . ...++ +|+.++++++.+.+.
T Consensus 16 ~~~vvllHG~~~~~--~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~------~--~~~~~~~~~~d~~~~~~~l~~~~~ 85 (247)
T 1tqh_A 16 ERAVLLLHGFTGNS--ADVRMLGRFLESKGYTCHAPIYKGHGVPPEE------L--VHTGPDDWWQDVMNGYEFLKNKGY 85 (247)
T ss_dssp SCEEEEECCTTCCT--HHHHHHHHHHHHTTCEEEECCCTTSSSCHHH------H--TTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEECCCCCCh--HHHHHHHHHHHHCCCEEEecccCCCCCCHHH------h--cCCCHHHHHHHHHHHHHHHHHcCC
Confidence 36789999976543 4567778889899999999999999953111 0 11233 445555666655543
Q ss_pred CCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccch--hhcc-------C---CCCCCCccc----cccc-CCC
Q 004839 572 VKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDAT--NTLL-------Y---PILPLIAAD----YEEF-GYP 634 (728)
Q Consensus 572 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~--~~~~-------~---~~~~~~~~~----~~~~-g~p 634 (728)
+++.++|+||||.+++.++.++| ++++|+.++..... .... . ......... ...+ ..+
T Consensus 86 ---~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (247)
T 1tqh_A 86 ---EKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTP 160 (247)
T ss_dssp ---CCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSC
T ss_pred ---CeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhhhhcccCCC
Confidence 58999999999999999999988 77777644322110 0000 0 000000000 0000 000
Q ss_pred CC-HHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHH
Q 004839 635 GD-IDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCK 713 (728)
Q Consensus 635 ~~-~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 713 (728)
.. ......+. .+....+.+ ++.|+|+|+|..|..||+..+.++++.+.... ..+.+++++||........-.
T Consensus 161 ~~~~~~~~~~~-~~~~~~l~~-i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~~e~~~~~ 233 (247)
T 1tqh_A 161 MKTLKALQELI-ADVRDHLDL-IYAPTFVVQARHDEMINPDSANIIYNEIESPV-----KQIKWYEQSGHVITLDQEKDQ 233 (247)
T ss_dssp CTTHHHHHHHH-HHHHHTGGG-CCSCEEEEEETTCSSSCTTHHHHHHHHCCCSS-----EEEEEETTCCSSGGGSTTHHH
T ss_pred HHHHHHHHHHH-HHHHhhccc-CCCCEEEEecCCCCCCCcchHHHHHHhcCCCc-----eEEEEeCCCceeeccCccHHH
Confidence 00 00011110 112234555 89999999999999999999999988886422 233337999998543111122
Q ss_pred HHHHHHHHHHH
Q 004839 714 ESALETAFLIK 724 (728)
Q Consensus 714 ~~~~~~afl~~ 724 (728)
......+||.+
T Consensus 234 ~~~~i~~Fl~~ 244 (247)
T 1tqh_A 234 LHEDIYAFLES 244 (247)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 23446788865
No 131
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.58 E-value=4.6e-13 Score=144.08 Aligned_cols=264 Identities=9% Similarity=0.051 Sum_probs=163.1
Q ss_pred eceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccc--eeeeEEEecCCCEEEEEEecCCCCcceeEEEECCC
Q 004839 127 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAV--RVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 204 (728)
Q Consensus 127 ~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~--~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t 204 (728)
..++|||||++|||..+.+|. .+||++|+++|+..+++... ....+.|||||+.|+|...+ ..||+.++.+
T Consensus 39 ~~~~~SpDg~~l~~~~~~~g~--~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~ 111 (388)
T 3pe7_A 39 YQKCFTRDGSKLLFGGAFDGP--WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-----RNLMRVDLAT 111 (388)
T ss_dssp TSCCBCTTSCEEEEEECTTSS--CEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-----TEEEEEETTT
T ss_pred cCccCCCCCCEEEEEEcCCCC--ceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-----CeEEEEECCC
Confidence 447899999999999875553 57999999999988876522 22367899999999998632 4799999988
Q ss_pred CCceeEEeeecCcceE--EEEEEcCCCCEEEEEEc-------------------CCCceEEEEEeCCCCCCCeEEeeecC
Q 004839 205 TDEDALLLEESNENVY--VNIRHTKDFHFVCVHTF-------------------STTSSKVFLINAADPFSGLTLIWECE 263 (728)
Q Consensus 205 ~~~~~lv~~~~~~~~~--~~~~~SpDg~~l~~~~~-------------------~~~~~~l~~~dl~~~~~~~~~l~~~~ 263 (728)
++.. .++..+.. +. .....++||+.|+.... ......||++|+++ ++.+.+....
T Consensus 112 g~~~-~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~--g~~~~l~~~~ 187 (388)
T 3pe7_A 112 LEEN-VVYQVPAE-WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT--GESTVILQEN 187 (388)
T ss_dssp CCEE-EEEECCTT-EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT--CCEEEEEEES
T ss_pred Ccce-eeeechhh-cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC--CceEEeecCC
Confidence 7533 34433322 22 22345999999875431 12237899999988 5566666544
Q ss_pred Cc-eEEEEee-cCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCC
Q 004839 264 GL-AHCIVEH-HEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGR 339 (728)
Q Consensus 264 ~~-~~~~~~~-dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g 339 (728)
.. ....+++ ||+.|++..+..... ...+|+.++.+ ....+.+........+..+.+. ++.|++....++
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~---~~~~l~~~d~~----~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 260 (388)
T 3pe7_A 188 QWLGHPIYRPYDDSTVAFCHEGPHDL---VDARMWLINED----GTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKG 260 (388)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCTTT---SSCSEEEEETT----SCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETT
T ss_pred ccccccEECCCCCCEEEEEEecCCCC---CcceEEEEeCC----CCceEEeeeCCCCcccccceECCCCCEEEEEecCCC
Confidence 33 3456789 999998888743211 13568888765 2334444333222334444554 456877776666
Q ss_pred ee--EEEEEecCCCCCCcceeecccccccccCCCceeee--ecCCCccCCCcEEEEEEcc-----CCCCceEEEEECCCC
Q 004839 340 TY--RLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQI--VPGPNYDYYSSTMRFAISS-----PVMPDAVVDYDLSYG 410 (728)
Q Consensus 340 ~~--~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i--~~~~~~~~~~~~~~~~~ss-----~~~p~~~~~~~~~~~ 410 (728)
.. .|+++++.+++- ..+ ..++...... ..+..+++|+..+++..+. ......||.+|+.++
T Consensus 261 ~~~~~l~~~d~~~g~~---~~l-------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 261 SPDRFIYSADPETLEN---RQL-------TSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp CCCEEEEEECTTTCCE---EEE-------EEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT
T ss_pred CCcceEEEEecCCCce---EEE-------EcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC
Confidence 55 499999876531 111 1222210000 0012245677777765532 245678999999999
Q ss_pred eEEEEEee
Q 004839 411 KWNIIQQQ 418 (728)
Q Consensus 411 ~~~~l~~~ 418 (728)
+.+.|...
T Consensus 331 ~~~~l~~~ 338 (388)
T 3pe7_A 331 TQHRVARH 338 (388)
T ss_dssp EEEEEEEC
T ss_pred ceEEeccc
Confidence 88777654
No 132
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.58 E-value=1.9e-14 Score=148.75 Aligned_cols=227 Identities=16% Similarity=0.156 Sum_probs=132.8
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.+|.++.+... .+ +.+.|.||++||+++... .|......++++||.|+++|.||+|.+...- ....
T Consensus 12 ~~g~~l~~~~~-g~----~~~~~~vvllHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-------~~~~ 77 (293)
T 1mtz_A 12 VNGIYIYYKLC-KA----PEEKAKLMTMHGGPGMSH--DYLLSLRDMTKEGITVLFYDQFGCGRSEEPD-------QSKF 77 (293)
T ss_dssp ETTEEEEEEEE-CC----SSCSEEEEEECCTTTCCS--GGGGGGGGGGGGTEEEEEECCTTSTTSCCCC-------GGGC
T ss_pred ECCEEEEEEEE-CC----CCCCCeEEEEeCCCCcch--hHHHHHHHHHhcCcEEEEecCCCCccCCCCC-------CCcc
Confidence 36777665432 11 112367899999766442 2323344567889999999999999763221 1123
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhcc-----CCCCCC------
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLL-----YPILPL------ 623 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~-----~~~~~~------ 623 (728)
+++++.+.+..+++.- .+.+++.++|||+||.+++.++.++|++++++|+.+|......... ....+.
T Consensus 78 ~~~~~~~dl~~~~~~l-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (293)
T 1mtz_A 78 TIDYGVEEAEALRSKL-FGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAI 156 (293)
T ss_dssp SHHHHHHHHHHHHHHH-HTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHh-cCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHH
Confidence 5666666665555432 0225899999999999999999999999999999998765321100 000000
Q ss_pred ---------Ccc--------ccccc---CCCCCHHHHHHH---------H---------------ccCcccccccCCCCC
Q 004839 624 ---------IAA--------DYEEF---GYPGDIDDFHAI---------R---------------NYSPYDNIQKDVLYP 659 (728)
Q Consensus 624 ---------~~~--------~~~~~---g~p~~~~~~~~~---------~---------------~~sP~~~i~~~~~~P 659 (728)
... .+..+ ..++.......+ . .++....+.+ ++.|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P 235 (293)
T 1mtz_A 157 KKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISA-IKIP 235 (293)
T ss_dssp HHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGG-CCSC
T ss_pred HHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhcc-CCCC
Confidence 000 00000 011111111111 0 1111223444 7899
Q ss_pred eEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 004839 660 AVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMM 726 (728)
Q Consensus 660 ~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l 726 (728)
+|+|+|..| .+++..+.++.+.+.. ..+.+++++||.... ++.-+......+||.++|
T Consensus 236 ~lii~G~~D-~~~~~~~~~~~~~~~~-------~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~l 293 (293)
T 1mtz_A 236 TLITVGEYD-EVTPNVARVIHEKIAG-------SELHVFRDCSHLTMW-EDREGYNKLLSDFILKHL 293 (293)
T ss_dssp EEEEEETTC-SSCHHHHHHHHHHSTT-------CEEEEETTCCSCHHH-HSHHHHHHHHHHHHHTCC
T ss_pred EEEEeeCCC-CCCHHHHHHHHHhCCC-------ceEEEeCCCCCCccc-cCHHHHHHHHHHHHHhcC
Confidence 999999999 7888888888776642 233337899997532 122223444678887654
No 133
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.58 E-value=1.6e-14 Score=156.55 Aligned_cols=222 Identities=11% Similarity=-0.057 Sum_probs=142.2
Q ss_pred ceEEEEEEECC-CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeE----EEEEcCCCCCCC
Q 004839 465 YSCEQYDVPSH-DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWV----VAFADVRGGGGG 539 (728)
Q Consensus 465 ~~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~----v~~~d~RG~g~~ 539 (728)
.+.+.+++.|. .|..+.++++.|++.. ++++|+|+++||+.... ...+......|+++|++ |+.+|++|+.+.
T Consensus 166 G~v~~~~~~S~~~g~~~~~~vy~P~~~~-~~~~PvlvllHG~~~~~-~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r 243 (403)
T 3c8d_A 166 IPAKEIIWKSERLKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQ-SMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHR 243 (403)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEC------CCCCEEEESSHHHHHH-TSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHH
T ss_pred CceEEEEEEccccCCcEEEEEEeCCCCC-CCCCCEEEEeCCHHHhh-cCcHHHHHHHHHHcCCCCCeEEEEECCCCCccc
Confidence 45567777765 6788999999998753 56799999999952211 11234456888888885 999999874221
Q ss_pred CCccccccccCCCCCcHHHHH--HHHHHHHHc-C-CCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhh
Q 004839 540 GKKWHHDGRRTKKLNSIKDFI--SCARFLIEK-E-IVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNT 615 (728)
Q Consensus 540 G~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~-~-~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~ 615 (728)
..++ .....+.|++ +.+.++.++ + ..|+++++|+|+||||++++.++.++|++|+++++.+|.+++...
T Consensus 244 ~~~~-------~~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~ 316 (403)
T 3c8d_A 244 AHEL-------PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHR 316 (403)
T ss_dssp HHHS-------SSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCT
T ss_pred cccC-------CChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCC
Confidence 1111 0112445543 456666654 2 358899999999999999999999999999999999998754321
Q ss_pred ccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccE
Q 004839 616 LLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPI 695 (728)
Q Consensus 616 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~ 695 (728)
+.+.+....+.+.. .+ ... ...|++|++|..|+.+ ..++++++++|+++|++ +
T Consensus 317 ----------------~~~~~~~~~~~~~~-~~---~~~-~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~-----v 369 (403)
T 3c8d_A 317 ----------------GGQQEGVLLEKLKA-GE---VSA-EGLRIVLEAGIREPMI-MRANQALYAQLHPIKES-----I 369 (403)
T ss_dssp ----------------TSSSCCHHHHHHHT-TS---SCC-CSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTS-----E
T ss_pred ----------------CCCcHHHHHHHHHh-cc---ccC-CCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCC-----E
Confidence 00001112222222 11 122 4567777888888543 78999999999999853 3
Q ss_pred EE--EcCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 004839 696 LL--NLTTDIVEENRYLQCKESALETAFLIKMM 726 (728)
Q Consensus 696 ~~--~~~~gH~~~~~~~~~~~~~~~~afl~~~l 726 (728)
.+ +++ ||..... ...+...+.||.+.+
T Consensus 370 ~~~~~~G-gH~~~~w---~~~l~~~l~~l~~~~ 398 (403)
T 3c8d_A 370 FWRQVDG-GHDALCW---RGGLMQGLIDLWQPL 398 (403)
T ss_dssp EEEEESC-CSCHHHH---HHHHHHHHHHHHGGG
T ss_pred EEEEeCC-CCCHHHH---HHHHHHHHHHHhccc
Confidence 44 676 7974321 223455678887765
No 134
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.58 E-value=9.5e-14 Score=148.16 Aligned_cols=222 Identities=17% Similarity=0.164 Sum_probs=136.0
Q ss_pred ccEEEEEcCCCCCCcCc-----------ccHHHH---HHHHHCCeEEEEEcCCC--CCCCCCcccccc--c---cCCCCC
Q 004839 496 NPGLLHGHGAYGELLDK-----------RWRSEL---KSLLDRGWVVAFADVRG--GGGGGKKWHHDG--R---RTKKLN 554 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~-----------~~~~~~---~~l~~~Gy~v~~~d~RG--~g~~G~~~~~~~--~---~~~~~~ 554 (728)
.|+||++||..+..... .|...+ ..|+++||.|+.+|+|| +|..+..-.... . ......
T Consensus 46 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~~~ 125 (366)
T 2pl5_A 46 NNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFV 125 (366)
T ss_dssp CCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCC
T ss_pred CceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCCCCCCCCccccCCCCcc
Confidence 58899999976654311 344433 24667899999999999 665432210000 0 000124
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcE-EEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc------------cCCC-
Q 004839 555 SIKDFISCARFLIEKEIVKEHKL-AGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL------------LYPI- 620 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri-~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~------------~~~~- 620 (728)
+++|+.+.+..+++. .+.+++ .++|||+||.+++.++.++|++++++|+.+|........ ..+.
T Consensus 126 ~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (366)
T 2pl5_A 126 SIQDMVKAQKLLVES--LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNW 203 (366)
T ss_dssp CHHHHHHHHHHHHHH--TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTC
T ss_pred cHHHHHHHHHHHHHH--cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccchhhHHHHHHHHhCccc
Confidence 788888888888865 244688 899999999999999999999999999999876532100 0000
Q ss_pred --------CC--------------------------------------CCcccccc-----cCCCCCHHH----HHHHHc
Q 004839 621 --------LP--------------------------------------LIAADYEE-----FGYPGDIDD----FHAIRN 645 (728)
Q Consensus 621 --------~~--------------------------------------~~~~~~~~-----~g~p~~~~~----~~~~~~ 645 (728)
.+ .....+.. +........ ...+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (366)
T 2pl5_A 204 KNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDH 283 (366)
T ss_dssp GGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHH
T ss_pred ccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhhh
Confidence 00 00000000 000001111 122333
Q ss_pred cCcc------cccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEE-cCCCCCCCc-hhhhHHHHHH
Q 004839 646 YSPY------DNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLN-LTTDIVEEN-RYLQCKESAL 717 (728)
Q Consensus 646 ~sP~------~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~-~~~gH~~~~-~~~~~~~~~~ 717 (728)
+... ..+.+ +++|+|+|+|..|..||+..+.++++.+...+.. ..+..+ +++||.... .... ....
T Consensus 284 ~~~~~~~~~~~~l~~-i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~e~p~~--~~~~ 357 (366)
T 2pl5_A 284 YSLGKGKELTAALSN-ATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKR---VFYVELQSGEGHDSFLLKNPK--QIEI 357 (366)
T ss_dssp CBCCSHHHHHHHHTT-CCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCC---EEEEEECCCBSSGGGGSCCHH--HHHH
T ss_pred hccccccchhhhhcc-CCCCEEEEecCCCcccCHHHHHHHHHHhhhcccC---eEEEEeCCCCCcchhhcChhH--HHHH
Confidence 3221 14454 8999999999999999999999999999865421 233336 799998644 3332 2344
Q ss_pred HHHHHHHh
Q 004839 718 ETAFLIKM 725 (728)
Q Consensus 718 ~~afl~~~ 725 (728)
..+||.++
T Consensus 358 i~~fl~~~ 365 (366)
T 2pl5_A 358 LKGFLENP 365 (366)
T ss_dssp HHHHHHCC
T ss_pred HHHHHccC
Confidence 56888653
No 135
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.58 E-value=1.7e-13 Score=142.74 Aligned_cols=228 Identities=11% Similarity=0.026 Sum_probs=135.8
Q ss_pred EEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCC-CCCCCccccc
Q 004839 468 EQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGG-GGGGKKWHHD 546 (728)
Q Consensus 468 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~-g~~G~~~~~~ 546 (728)
+...+.. +|.++.++.. + .+..|+||++||+.+.. ..|......|++ ||.|+.+|+||+ |....
T Consensus 46 ~~~~v~~-~~~~~~~~~~---g---~~~~~~vv~lHG~~~~~--~~~~~~~~~L~~-g~~vi~~D~~G~gG~s~~----- 110 (306)
T 2r11_A 46 KSFYIST-RFGQTHVIAS---G---PEDAPPLVLLHGALFSS--TMWYPNIADWSS-KYRTYAVDIIGDKNKSIP----- 110 (306)
T ss_dssp EEEEECC-TTEEEEEEEE---S---CTTSCEEEEECCTTTCG--GGGTTTHHHHHH-HSEEEEECCTTSSSSCEE-----
T ss_pred ceEEEec-CCceEEEEee---C---CCCCCeEEEECCCCCCH--HHHHHHHHHHhc-CCEEEEecCCCCCCCCCC-----
Confidence 4444554 4446665432 1 12358899999987644 346666777877 999999999999 43311
Q ss_pred cccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhcc------CCC
Q 004839 547 GRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLL------YPI 620 (728)
Q Consensus 547 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------~~~ 620 (728)
.....+++|+.+.+..+++.- +.+++.++|+|+||++++.++.++|++++++|+.+|......... ...
T Consensus 111 ---~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 185 (306)
T 2r11_A 111 ---ENVSGTRTDYANWLLDVFDNL--GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGL 185 (306)
T ss_dssp ---CSCCCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTT
T ss_pred ---CCCCCCHHHHHHHHHHHHHhc--CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHH
Confidence 112346788877777777542 347899999999999999999999999999999999876421100 000
Q ss_pred C-CCCccccccc--CCC-CCHHH---HHHH--------Hcc----------CcccccccCCCCCeEEEEcCCCCCCCHHH
Q 004839 621 L-PLIAADYEEF--GYP-GDIDD---FHAI--------RNY----------SPYDNIQKDVLYPAVLVTSSFNTRFGVWE 675 (728)
Q Consensus 621 ~-~~~~~~~~~~--g~p-~~~~~---~~~~--------~~~----------sP~~~i~~~~~~P~lli~g~~D~~Vp~~~ 675 (728)
. ......+..+ +.. ..... .+.. ..+ .....+.+ +++|+|+++|+.|..||+.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lii~G~~D~~~~~~~ 264 (306)
T 2r11_A 186 TASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRS-ARVPILLLLGEHEVIYDPHS 264 (306)
T ss_dssp TSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHT-CCSCEEEEEETTCCSSCHHH
T ss_pred HHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhc-CCCCEEEEEeCCCcccCHHH
Confidence 0 0000000000 000 00000 0000 000 11122344 78999999999999999998
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHH
Q 004839 676 AAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLI 723 (728)
Q Consensus 676 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~ 723 (728)
+.++++++.. + ..+.+++++||.... ...-.......+||.
T Consensus 265 ~~~~~~~~~~-~-----~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 265 ALHRASSFVP-D-----IEAEVIKNAGHVLSM-EQPTYVNERVMRFFN 305 (306)
T ss_dssp HHHHHHHHST-T-----CEEEEETTCCTTHHH-HSHHHHHHHHHHHHC
T ss_pred HHHHHHHHCC-C-----CEEEEeCCCCCCCcc-cCHHHHHHHHHHHHh
Confidence 8877765432 1 233337899997432 111222334566664
No 136
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.57 E-value=5.4e-14 Score=144.22 Aligned_cols=102 Identities=19% Similarity=0.200 Sum_probs=79.4
Q ss_pred cEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004839 497 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 576 (728)
Q Consensus 497 P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 576 (728)
|.||++||..+.. ..|......|+++||.|+.+|+||+|.+.... ...+++++.+.+..+++. .+.++
T Consensus 24 ~pvvllHG~~~~~--~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~--------~~~~~~~~~~dl~~~l~~--l~~~~ 91 (279)
T 1hkh_A 24 QPVVLIHGYPLDG--HSWERQTRELLAQGYRVITYDRRGFGGSSKVN--------TGYDYDTFAADLHTVLET--LDLRD 91 (279)
T ss_dssp EEEEEECCTTCCG--GGGHHHHHHHHHTTEEEEEECCTTSTTSCCCS--------SCCSHHHHHHHHHHHHHH--HTCCS
T ss_pred CcEEEEcCCCchh--hHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHh--cCCCc
Confidence 4489999976543 46778889999999999999999999764321 224566666666665543 23468
Q ss_pred EEEEEeCccHHHHHHHHHhCCC-ceeEEEEeCCcc
Q 004839 577 LAGWGYSAGGLLVAAAINCCPD-LFRAVVLEVPFL 610 (728)
Q Consensus 577 i~i~G~S~GG~~~~~~~~~~p~-~f~a~v~~~p~~ 610 (728)
+.++||||||.+++.++.++|+ +++++|+.+|+.
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~ 126 (279)
T 1hkh_A 92 VVLVGFSMGTGELARYVARYGHERVAKLAFLASLE 126 (279)
T ss_dssp EEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCC
T ss_pred eEEEEeChhHHHHHHHHHHcCccceeeEEEEccCC
Confidence 9999999999999999999999 999999998753
No 137
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.57 E-value=1.5e-14 Score=140.00 Aligned_cols=179 Identities=13% Similarity=0.034 Sum_probs=119.0
Q ss_pred CccEEEEEcCCCCCCc-CcccHH-HHHHHHHC-CeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCC
Q 004839 495 QNPGLLHGHGAYGELL-DKRWRS-ELKSLLDR-GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEI 571 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~-~~~~~~-~~~~l~~~-Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 571 (728)
+.|+||++||+.+... ...|.. ....|+++ ||.|+.+|+||.+.. ++...++.+++.-.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~~------------------~~~~~~~~~~~~l~ 64 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITA------------------RESIWLPFMETELH 64 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTTC------------------CHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCcc------------------cHHHHHHHHHHHhC
Confidence 4689999999866532 233554 56778877 999999999985321 12334444554322
Q ss_pred CCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccc-cCCCCCHHHHHHHHccCccc
Q 004839 572 VKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEE-FGYPGDIDDFHAIRNYSPYD 650 (728)
Q Consensus 572 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~-~g~p~~~~~~~~~~~~sP~~ 650 (728)
. .+++.++|+|+||++++.++.++| ++++|+.+|........ ...... +..+.. . .
T Consensus 65 ~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~--------~~~~~~~~~~~~~---~---------~ 121 (194)
T 2qs9_A 65 C-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDE--------NERASGYFTRPWQ---W---------E 121 (194)
T ss_dssp C-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCH--------HHHHTSTTSSCCC---H---------H
T ss_pred c-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchh--------hhHHHhhhccccc---H---------H
Confidence 2 378999999999999999999998 99999999876432100 000001 112221 1 1
Q ss_pred ccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHHHhh
Q 004839 651 NIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN-RYLQCKESALETAFLIKMM 726 (728)
Q Consensus 651 ~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~~~l 726 (728)
.+.. +..|+|+++|..|..||+.++.++++.+ .. .+.+++++||.... .... .+..++||.+..
T Consensus 122 ~~~~-~~~p~lii~G~~D~~vp~~~~~~~~~~~-~~-------~~~~~~~~gH~~~~~~p~~---~~~~~~fl~~~~ 186 (194)
T 2qs9_A 122 KIKA-NCPYIVQFGSTDDPFLPWKEQQEVADRL-ET-------KLHKFTDCGHFQNTEFHEL---ITVVKSLLKVPA 186 (194)
T ss_dssp HHHH-HCSEEEEEEETTCSSSCHHHHHHHHHHH-TC-------EEEEESSCTTSCSSCCHHH---HHHHHHHHTCCC
T ss_pred HHHh-hCCCEEEEEeCCCCcCCHHHHHHHHHhc-CC-------eEEEeCCCCCccchhCHHH---HHHHHHHHHhhh
Confidence 1222 4568999999999999999999999888 31 23337899998654 3333 455568987643
No 138
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.57 E-value=4.5e-14 Score=144.31 Aligned_cols=210 Identities=15% Similarity=0.102 Sum_probs=133.7
Q ss_pred CccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 574 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 574 (728)
..|+||++||..+.. ..|......|+ ++|.|+.+|+||+|.+... .....+++++.+.+..+++.-. .
T Consensus 14 ~~~~vvllHG~~~~~--~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~--~ 81 (268)
T 3v48_A 14 DAPVVVLISGLGGSG--SYWLPQLAVLE-QEYQVVCYDQRGTGNNPDT-------LAEDYSIAQMAAELHQALVAAG--I 81 (268)
T ss_dssp TCCEEEEECCTTCCG--GGGHHHHHHHH-TTSEEEECCCTTBTTBCCC-------CCTTCCHHHHHHHHHHHHHHTT--C
T ss_pred CCCEEEEeCCCCccH--HHHHHHHHHHh-hcCeEEEECCCCCCCCCCC-------ccccCCHHHHHHHHHHHHHHcC--C
Confidence 358899999976543 45777777775 4799999999999975321 1123478888888887776532 3
Q ss_pred CcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhcc----------C--------CCCC---CCcccccc---
Q 004839 575 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLL----------Y--------PILP---LIAADYEE--- 630 (728)
Q Consensus 575 ~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~----------~--------~~~~---~~~~~~~~--- 630 (728)
+++.++||||||.+++.++.++|++++++|+..+......... . ...+ ....+...
T Consensus 82 ~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (268)
T 3v48_A 82 EHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAP 161 (268)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTHH
T ss_pred CCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcccc
Confidence 6899999999999999999999999999999887543211000 0 0000 00000000
Q ss_pred ---------c-CCCCCH---HHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEE
Q 004839 631 ---------F-GYPGDI---DDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL 697 (728)
Q Consensus 631 ---------~-g~p~~~---~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~ 697 (728)
. ..+... .....+...+....+.+ +++|+|+|+|+.|..+|+..+.++.+.+... .+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~-i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~~-------~~~~ 233 (268)
T 3v48_A 162 RLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADR-IRCPVQIICASDDLLVPTACSSELHAALPDS-------QKMV 233 (268)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGG-CCSCEEEEEETTCSSSCTHHHHHHHHHCSSE-------EEEE
T ss_pred cchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhc-CCCCeEEEEeCCCcccCHHHHHHHHHhCCcC-------eEEE
Confidence 0 000000 01112223333344555 8999999999999999999999988877542 2233
Q ss_pred EcCCCCCCCc-hhhhHHHHHHHHHHHHHhh
Q 004839 698 NLTTDIVEEN-RYLQCKESALETAFLIKMM 726 (728)
Q Consensus 698 ~~~~gH~~~~-~~~~~~~~~~~~afl~~~l 726 (728)
.+++||.... ....+ .....+||.+.+
T Consensus 234 ~~~~GH~~~~e~p~~~--~~~i~~fl~~~~ 261 (268)
T 3v48_A 234 MPYGGHACNVTDPETF--NALLLNGLASLL 261 (268)
T ss_dssp ESSCCTTHHHHCHHHH--HHHHHHHHHHHH
T ss_pred eCCCCcchhhcCHHHH--HHHHHHHHHHhc
Confidence 7899997433 33333 344578887654
No 139
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.57 E-value=1.1e-13 Score=150.17 Aligned_cols=244 Identities=11% Similarity=-0.006 Sum_probs=150.9
Q ss_pred CceEEEEEEECCC--CcE--EEEEEEEcCCCCCCCCccEEEEEcCCCCCC--cCcc----------------cH-HHHHH
Q 004839 464 FYSCEQYDVPSHD--GIS--VPLTIIYSPKYKKENQNPGLLHGHGAYGEL--LDKR----------------WR-SELKS 520 (728)
Q Consensus 464 ~~~~~~~~~~s~d--G~~--i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~--~~~~----------------~~-~~~~~ 520 (728)
.....++.+.+.| |.. +.++++.|.+.. .+.|+|.|.||-.+.. ..++ +. .....
T Consensus 72 ~~~a~ri~Y~std~~G~p~~~~gtv~~P~~~~--~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~ 149 (462)
T 3guu_A 72 NAASFQLQYRTTNTQNEAVADVATVWIPAKPA--SPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIG 149 (462)
T ss_dssp TCEEEEEEEEEECTTSCEEEEEEEEEECSSCC--SSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHH
T ss_pred CceEEEEEEEEECCCCCEEEEEEEEEecCCCC--CCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHH
Confidence 3467777777655 655 567899998743 3579999999954422 1122 12 23466
Q ss_pred H-HHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC---
Q 004839 521 L-LDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC--- 596 (728)
Q Consensus 521 l-~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~--- 596 (728)
| +++||+|+++||+|.|+ .|... ... + ..+.|.+.++..+. +.....+++++|+|+||..+++++...
T Consensus 150 ~~l~~G~~Vv~~Dy~G~G~---~y~~~-~~~-~-~~vlD~vrAa~~~~--~~~~~~~v~l~G~S~GG~aal~aa~~~~~y 221 (462)
T 3guu_A 150 WALQQGYYVVSSDHEGFKA---AFIAG-YEE-G-MAILDGIRALKNYQ--NLPSDSKVALEGYSGGAHATVWATSLAESY 221 (462)
T ss_dssp HHHHTTCEEEEECTTTTTT---CTTCH-HHH-H-HHHHHHHHHHHHHT--TCCTTCEEEEEEETHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCEEEEecCCCCCC---cccCC-cch-h-HHHHHHHHHHHHhc--cCCCCCCEEEEeeCccHHHHHHHHHhChhh
Confidence 7 99999999999999985 22211 100 0 12334444433333 333358999999999999999987754
Q ss_pred -CC-ceeEEEEeCCcccchhhcc--CC-----------------------------------------CC--CCCc----
Q 004839 597 -PD-LFRAVVLEVPFLDATNTLL--YP-----------------------------------------IL--PLIA---- 625 (728)
Q Consensus 597 -p~-~f~a~v~~~p~~d~~~~~~--~~-----------------------------------------~~--~~~~---- 625 (728)
|+ .++++++.++..|+...+. +. .. ++..
T Consensus 222 apel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~ 301 (462)
T 3guu_A 222 APELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLT 301 (462)
T ss_dssp CTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHH
T ss_pred cCccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHh
Confidence 44 5899999999888754221 00 00 0000
Q ss_pred ---cccccc--C-CC-CCHHHHHHHHccCccc----ccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCcc
Q 004839 626 ---ADYEEF--G-YP-GDIDDFHAIRNYSPYD----NIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRP 694 (728)
Q Consensus 626 ---~~~~~~--g-~p-~~~~~~~~~~~~sP~~----~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~ 694 (728)
.....+ + ++ .++...+.+.+.+.-. +-....+.|++++||..|++||+.++++++++++++|. .
T Consensus 302 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~-----~ 376 (462)
T 3guu_A 302 YPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGA-----N 376 (462)
T ss_dssp CTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTC-----E
T ss_pred hccCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCC-----C
Confidence 000000 1 01 0122233344433211 01112688999999999999999999999999999884 4
Q ss_pred EEE--EcCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 004839 695 ILL--NLTTDIVEENRYLQCKESALETAFLIKMM 726 (728)
Q Consensus 695 ~~~--~~~~gH~~~~~~~~~~~~~~~~afl~~~l 726 (728)
+.+ |++++|+.... ......++||.++|
T Consensus 377 V~~~~y~~~~H~~~~~----~~~~d~l~WL~~r~ 406 (462)
T 3guu_A 377 INFSPYPIAEHLTAEI----FGLVPSLWFIKQAF 406 (462)
T ss_dssp EEEEEESSCCHHHHHH----HTHHHHHHHHHHHH
T ss_pred eEEEEECcCCccCchh----hhHHHHHHHHHHHh
Confidence 444 88999975332 22566789999887
No 140
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.57 E-value=2.8e-14 Score=137.71 Aligned_cols=163 Identities=13% Similarity=0.071 Sum_probs=115.3
Q ss_pred ccEEEEEcCCCCCCcCcccHHHH-HHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCC
Q 004839 496 NPGLLHGHGAYGELLDKRWRSEL-KSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 574 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~~~~~~~-~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 574 (728)
.|+||++||..+... ..|.... ..|+++||.|+.+|+|.++. .+++++.+.+..+++.- .
T Consensus 4 ~p~vv~~HG~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~~~~~---------------~~~~~~~~~~~~~~~~~---~ 64 (192)
T 1uxo_A 4 TKQVYIIHGYRASST-NHWFPWLKKRLLADGVQADILNMPNPLQ---------------PRLEDWLDTLSLYQHTL---H 64 (192)
T ss_dssp CCEEEEECCTTCCTT-STTHHHHHHHHHHTTCEEEEECCSCTTS---------------CCHHHHHHHHHTTGGGC---C
T ss_pred CCEEEEEcCCCCCcc-hhHHHHHHHHHHhCCcEEEEecCCCCCC---------------CCHHHHHHHHHHHHHhc---c
Confidence 488999999765432 1465555 46889999999999992221 15777777766666542 5
Q ss_pred CcEEEEEeCccHHHHHHHHHhCCC--ceeEEEEeCCcccchhhccCCCCCCCccccccc-CCCCCHHHHHHHHccCcccc
Q 004839 575 HKLAGWGYSAGGLLVAAAINCCPD--LFRAVVLEVPFLDATNTLLYPILPLIAADYEEF-GYPGDIDDFHAIRNYSPYDN 651 (728)
Q Consensus 575 ~ri~i~G~S~GG~~~~~~~~~~p~--~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~-g~p~~~~~~~~~~~~sP~~~ 651 (728)
+++.++|+|+||.+++.++.++|+ +++++|+.+|+...... .+ ....+ ..+.+. ..
T Consensus 65 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~-----~~----~~~~~~~~~~~~------------~~ 123 (192)
T 1uxo_A 65 ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT-----LQ----MLDEFTQGSFDH------------QK 123 (192)
T ss_dssp TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT-----CG----GGGGGTCSCCCH------------HH
T ss_pred CCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc-----ch----hhhhhhhcCCCH------------HH
Confidence 799999999999999999999999 99999999997653211 10 01112 122211 12
Q ss_pred cccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc
Q 004839 652 IQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN 707 (728)
Q Consensus 652 i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 707 (728)
+.+ ++.|+|+++|..|..||+.++.++++.+ + ..+..++++||....
T Consensus 124 ~~~-~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~-----~~~~~~~~~gH~~~~ 170 (192)
T 1uxo_A 124 IIE-SAKHRAVIASKDDQIVPFSFSKDLAQQI---D-----AALYEVQHGGHFLED 170 (192)
T ss_dssp HHH-HEEEEEEEEETTCSSSCHHHHHHHHHHT---T-----CEEEEETTCTTSCGG
T ss_pred HHh-hcCCEEEEecCCCCcCCHHHHHHHHHhc---C-----ceEEEeCCCcCcccc
Confidence 233 5569999999999999999999998888 2 123337999998654
No 141
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.57 E-value=7.8e-14 Score=140.40 Aligned_cols=213 Identities=11% Similarity=0.084 Sum_probs=130.4
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHH--CCeEEEEEcCCCC------C
Q 004839 466 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLD--RGWVVAFADVRGG------G 537 (728)
Q Consensus 466 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~--~Gy~v~~~d~RG~------g 537 (728)
..+.+.|.+ ..+...++.|+. ...++||++||.-+.. ..+......|.. .++.+++|+-+-. +
T Consensus 14 ~~~~~~~~~---~~l~y~ii~P~~----~~~~~VI~LHG~G~~~--~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~ 84 (246)
T 4f21_A 14 GTENLYFQS---NAMNYELMEPAK----QARFCVIWLHGLGADG--HDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMG 84 (246)
T ss_dssp ------------CCCCEEEECCSS----CCCEEEEEEEC--CCC--CCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHH
T ss_pred ccceEEEec---CCcCceEeCCCC----cCCeEEEEEcCCCCCH--HHHHHHHHHhhhcCCCeEEEeCCCCccccccCCC
Confidence 344555554 245666777753 2357889999842221 234333444432 3788999985321 1
Q ss_pred CCCCccccccccC-------CCCCcHHHHHHHHHHHHH---cCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeC
Q 004839 538 GGGKKWHHDGRRT-------KKLNSIKDFISCARFLIE---KEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEV 607 (728)
Q Consensus 538 ~~G~~~~~~~~~~-------~~~~~~~D~~~~~~~l~~---~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~ 607 (728)
..|..|+...... .....+...++.++.+++ +..+|++||++.|+|+||.|++.++.++|+.|+++|+.+
T Consensus 85 ~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~s 164 (246)
T 4f21_A 85 MQMRAWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALS 164 (246)
T ss_dssp HHHHSCTTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEES
T ss_pred CCcccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehh
Confidence 1244565432111 111223344444444432 234799999999999999999999999999999999988
Q ss_pred CcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCC
Q 004839 608 PFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVREST 687 (728)
Q Consensus 608 p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~ 687 (728)
|.+...... . ...... ..++|++++||..|++||+..++++++.|+++|
T Consensus 165 G~lp~~~~~---------------~--------------~~~~~~--~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g 213 (246)
T 4f21_A 165 TYLPAWDNF---------------K--------------GKITSI--NKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSG 213 (246)
T ss_dssp CCCTTHHHH---------------S--------------TTCCGG--GTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTT
T ss_pred hccCccccc---------------c--------------cccccc--ccCCchhhcccCCCCccCHHHHHHHHHHHHHCC
Confidence 854321100 0 001111 146899999999999999999999999999998
Q ss_pred CCCCCccEEE--EcCCCCCCCchhhhHHHHHHHHHHHHHhhcC
Q 004839 688 IYDPKRPILL--NLTTDIVEENRYLQCKESALETAFLIKMMES 728 (728)
Q Consensus 688 ~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~afl~~~l~~ 728 (728)
. .+.+ |++.||.... +++....+||.+.|.+
T Consensus 214 ~-----~v~~~~y~g~gH~i~~-----~~l~~~~~fL~k~l~l 246 (246)
T 4f21_A 214 F-----ANEYKHYVGMQHSVCM-----EEIKDISNFIAKTFKI 246 (246)
T ss_dssp C-----CEEEEEESSCCSSCCH-----HHHHHHHHHHHHHTTC
T ss_pred C-----CeEEEEECCCCCccCH-----HHHHHHHHHHHHHhCC
Confidence 5 3444 8899997532 2345577999999864
No 142
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.57 E-value=4.4e-14 Score=151.07 Aligned_cols=143 Identities=13% Similarity=0.066 Sum_probs=93.9
Q ss_pred eEEEEEEECCCCcEEEEEEEEcC-CCCCCCCccEEEEEcCCCCCCcC----------cc-cHHHH---HHHHHCCeEEEE
Q 004839 466 SCEQYDVPSHDGISVPLTIIYSP-KYKKENQNPGLLHGHGAYGELLD----------KR-WRSEL---KSLLDRGWVVAF 530 (728)
Q Consensus 466 ~~~~~~~~s~dG~~i~~~l~~p~-~~~~~~~~P~vv~~hGg~~~~~~----------~~-~~~~~---~~l~~~Gy~v~~ 530 (728)
..+...++..+|..+...+.+.. +.....+.|+||++||..++... .. |.... ..|+++||.|++
T Consensus 11 ~~~~~~~~~~~g~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~ 90 (377)
T 3i1i_A 11 KFILKEYTFENGRTIPVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVIC 90 (377)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEE
T ss_pred eEeecceeecCCCEeeeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEE
Confidence 34455677889988733343332 11112346899999997665432 11 33333 567789999999
Q ss_pred EcCCCCCCC-----CCcccccccc--------CCCCCcHHHHHHHHHHHHHcCCCCCCcEE-EEEeCccHHHHHHHHHhC
Q 004839 531 ADVRGGGGG-----GKKWHHDGRR--------TKKLNSIKDFISCARFLIEKEIVKEHKLA-GWGYSAGGLLVAAAINCC 596 (728)
Q Consensus 531 ~d~RG~g~~-----G~~~~~~~~~--------~~~~~~~~D~~~~~~~l~~~~~~d~~ri~-i~G~S~GG~~~~~~~~~~ 596 (728)
+|.||+|.+ |..-...... .....+++|+.+.+..++++- +.+++. ++||||||.+++.++.++
T Consensus 91 ~D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l--~~~~~~ilvGhS~Gg~ia~~~a~~~ 168 (377)
T 3i1i_A 91 TDNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDM--GIARLHAVMGPSAGGMIAQQWAVHY 168 (377)
T ss_dssp ECCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT--TCCCBSEEEEETHHHHHHHHHHHHC
T ss_pred ecccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHc--CCCcEeeEEeeCHhHHHHHHHHHHC
Confidence 999988642 1110001000 011347899998888888653 345775 999999999999999999
Q ss_pred CCceeEEEE-eCCcc
Q 004839 597 PDLFRAVVL-EVPFL 610 (728)
Q Consensus 597 p~~f~a~v~-~~p~~ 610 (728)
|++++++|+ .++..
T Consensus 169 p~~v~~lvl~~~~~~ 183 (377)
T 3i1i_A 169 PHMVERMIGVITNPQ 183 (377)
T ss_dssp TTTBSEEEEESCCSB
T ss_pred hHHHHHhcccCcCCC
Confidence 999999999 55543
No 143
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.56 E-value=3.9e-14 Score=146.34 Aligned_cols=226 Identities=14% Similarity=0.102 Sum_probs=137.7
Q ss_pred EEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCc-ccHHHHHHHHHCCeEEEEEcCCCCCCCCCcccccccc
Q 004839 471 DVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDK-RWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRR 549 (728)
Q Consensus 471 ~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~ 549 (728)
.+...+|.++.+...-+ ...|.||++||.++.. . .|......| ++||.|+++|.||+|.+... ..
T Consensus 6 ~~~~~~g~~l~~~~~G~------~~~~~vvllHG~~~~~--~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~-----~~ 71 (286)
T 2yys_A 6 GYVPVGEAELYVEDVGP------VEGPALFVLHGGPGGN--AYVLREGLQDY-LEGFRVVYFDQRGSGRSLEL-----PQ 71 (286)
T ss_dssp EEEECSSCEEEEEEESC------TTSCEEEEECCTTTCC--SHHHHHHHGGG-CTTSEEEEECCTTSTTSCCC-----CS
T ss_pred eEEeECCEEEEEEeecC------CCCCEEEEECCCCCcc--hhHHHHHHHHh-cCCCEEEEECCCCCCCCCCC-----cc
Confidence 34556888887654322 1247899999987644 3 466666666 56999999999999976320 00
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchh---hcc--CCCCCC-
Q 004839 550 TKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN---TLL--YPILPL- 623 (728)
Q Consensus 550 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~---~~~--~~~~~~- 623 (728)
.....+++++.+.+..+++.- ..+++.++|||+||.+++.++.++|+ ++++|+.+|..+... ... ....+.
T Consensus 72 ~~~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 148 (286)
T 2yys_A 72 DPRLFTVDALVEDTLLLAEAL--GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLP 148 (286)
T ss_dssp CGGGCCHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCS
T ss_pred CcccCcHHHHHHHHHHHHHHh--CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccch
Confidence 001346777777777777542 33689999999999999999999999 999999998653221 000 000000
Q ss_pred -------------Ccc-cccc--cCCC----------------CCHHHHHH--H---HccCcccccccCCCCCeEEEEcC
Q 004839 624 -------------IAA-DYEE--FGYP----------------GDIDDFHA--I---RNYSPYDNIQKDVLYPAVLVTSS 666 (728)
Q Consensus 624 -------------~~~-~~~~--~g~p----------------~~~~~~~~--~---~~~sP~~~i~~~~~~P~lli~g~ 666 (728)
... .... +..+ ........ + ..++....+.+ +++|+|+|+|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lvi~G~ 227 (286)
T 2yys_A 149 DPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTP-ERRPLYVLVGE 227 (286)
T ss_dssp CHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCC-CSSCEEEEEET
T ss_pred hHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhh-cCCCEEEEEeC
Confidence 000 0000 0000 00000010 1 11122233444 89999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHHHh
Q 004839 667 FNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN-RYLQCKESALETAFLIKM 725 (728)
Q Consensus 667 ~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~~~ 725 (728)
.|..+|+. +.++.+ +.... +.+.+++||.... .... ......+||.+.
T Consensus 228 ~D~~~~~~-~~~~~~-~~~~~-------~~~i~~~gH~~~~e~p~~--~~~~i~~fl~~~ 276 (286)
T 2yys_A 228 RDGTSYPY-AEEVAS-RLRAP-------IRVLPEAGHYLWIDAPEA--FEEAFKEALAAL 276 (286)
T ss_dssp TCTTTTTT-HHHHHH-HHTCC-------EEEETTCCSSHHHHCHHH--HHHHHHHHHHTT
T ss_pred CCCcCCHh-HHHHHh-CCCCC-------EEEeCCCCCCcChhhHHH--HHHHHHHHHHhh
Confidence 99999998 888888 75432 2336899997533 2222 234456888763
No 144
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.56 E-value=3.4e-15 Score=152.27 Aligned_cols=211 Identities=14% Similarity=0.048 Sum_probs=133.5
Q ss_pred cEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004839 497 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 576 (728)
Q Consensus 497 P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 576 (728)
|+||++||..+.. ..|......|++ ||.|+.+|+||+|.+...... .....+++++.+.+..+++.- +.++
T Consensus 29 ~~vv~lHG~~~~~--~~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~ 99 (282)
T 3qvm_A 29 KTVLLAHGFGCDQ--NMWRFMLPELEK-QFTVIVFDYVGSGQSDLESFS----TKRYSSLEGYAKDVEEILVAL--DLVN 99 (282)
T ss_dssp CEEEEECCTTCCG--GGGTTTHHHHHT-TSEEEECCCTTSTTSCGGGCC----TTGGGSHHHHHHHHHHHHHHT--TCCS
T ss_pred CeEEEECCCCCCc--chHHHHHHHHhc-CceEEEEecCCCCCCCCCCCC----ccccccHHHHHHHHHHHHHHc--CCCc
Confidence 8999999976543 456666777777 999999999999976433111 011236777777777776542 3478
Q ss_pred EEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhcc--CCCCCC------------C-ccc---c--cccCCCCC
Q 004839 577 LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLL--YPILPL------------I-AAD---Y--EEFGYPGD 636 (728)
Q Consensus 577 i~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~--~~~~~~------------~-~~~---~--~~~g~p~~ 636 (728)
+.++|+|+||.+++.++.++|++++++|+.+|......... ...... . ..+ . ..++.+..
T Consensus 100 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (282)
T 3qvm_A 100 VSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHS 179 (282)
T ss_dssp EEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTSC
T ss_pred eEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCccc
Confidence 99999999999999999999999999999998764332100 000000 0 000 0 00011111
Q ss_pred HHHH-------------------HHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEE
Q 004839 637 IDDF-------------------HAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL 697 (728)
Q Consensus 637 ~~~~-------------------~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~ 697 (728)
.... ..+...+....+.+ ++.|+|+++|+.|..||+..+.++.+.+... .+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-------~~~~ 251 (282)
T 3qvm_A 180 SELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLED-ISTPALIFQSAKDSLASPEVGQYMAENIPNS-------QLEL 251 (282)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGG-CCSCEEEEEEEECTTCCHHHHHHHHHHSSSE-------EEEE
T ss_pred hhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhc-CCCCeEEEEeCCCCcCCHHHHHHHHHhCCCC-------cEEE
Confidence 1111 11112233344555 8999999999999999999999988887432 2333
Q ss_pred EcCCCCCCCchhhhHHHHHHHHHHHHHh
Q 004839 698 NLTTDIVEENRYLQCKESALETAFLIKM 725 (728)
Q Consensus 698 ~~~~gH~~~~~~~~~~~~~~~~afl~~~ 725 (728)
++++||.... ...-.......+||.++
T Consensus 252 ~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 278 (282)
T 3qvm_A 252 IQAEGHCLHM-TDAGLITPLLIHFIQNN 278 (282)
T ss_dssp EEEESSCHHH-HCHHHHHHHHHHHHHHC
T ss_pred ecCCCCcccc-cCHHHHHHHHHHHHHhc
Confidence 7899998533 11222344467888765
No 145
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.56 E-value=2.7e-14 Score=147.10 Aligned_cols=207 Identities=13% Similarity=0.083 Sum_probs=129.8
Q ss_pred CccEEEEEcCCCCCCcCcccH-HHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWR-SELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 573 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~-~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 573 (728)
+.|+||++||..+.. ..|. .....|+++||.|+.+|+||+|..... ...+++++.+.+..+++.- +
T Consensus 42 ~~~~vv~lHG~~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~---------~~~~~~~~~~~~~~~l~~l--~ 108 (293)
T 3hss_A 42 TGDPVVFIAGRGGAG--RTWHPHQVPAFLAAGYRCITFDNRGIGATENA---------EGFTTQTMVADTAALIETL--D 108 (293)
T ss_dssp SSEEEEEECCTTCCG--GGGTTTTHHHHHHTTEEEEEECCTTSGGGTTC---------CSCCHHHHHHHHHHHHHHH--T
T ss_pred CCCEEEEECCCCCch--hhcchhhhhhHhhcCCeEEEEccCCCCCCCCc---------ccCCHHHHHHHHHHHHHhc--C
Confidence 458899999976644 3455 457788899999999999999754211 1246777777666666542 3
Q ss_pred CCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhcc------------CCCCCCCcc----ccccc-----C
Q 004839 574 EHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLL------------YPILPLIAA----DYEEF-----G 632 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~------------~~~~~~~~~----~~~~~-----g 632 (728)
.+++.++|+|+||.+++.++.++|++++++|+.+|......... ....+.... ....+ .
T Consensus 109 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (293)
T 3hss_A 109 IAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLN 188 (293)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHT
T ss_pred CCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhccccccc
Confidence 46899999999999999999999999999999998764421100 000000000 00000 0
Q ss_pred C---------------C-CCHHHHHHH---HccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCc
Q 004839 633 Y---------------P-GDIDDFHAI---RNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKR 693 (728)
Q Consensus 633 ~---------------p-~~~~~~~~~---~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~ 693 (728)
. . ........+ ...+....+.+ +++|+|+|+|+.|..+|+..+.++.+.+...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~------- 260 (293)
T 3hss_A 189 DDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRN-IAAPVLVIGFADDVVTPPYLGREVADALPNG------- 260 (293)
T ss_dssp CHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTT-CCSCEEEEEETTCSSSCHHHHHHHHHHSTTE-------
T ss_pred ccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhh-CCCCEEEEEeCCCCCCCHHHHHHHHHHCCCc-------
Confidence 0 0 000000000 01112233444 8899999999999999999999988887532
Q ss_pred cEEEEcCCCCCCCc-hhhhHHHHHHHHHHHHH
Q 004839 694 PILLNLTTDIVEEN-RYLQCKESALETAFLIK 724 (728)
Q Consensus 694 ~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~~ 724 (728)
.+...+++||.... .... ......+||.+
T Consensus 261 ~~~~~~~~gH~~~~~~p~~--~~~~i~~fl~~ 290 (293)
T 3hss_A 261 RYLQIPDAGHLGFFERPEA--VNTAMLKFFAS 290 (293)
T ss_dssp EEEEETTCCTTHHHHSHHH--HHHHHHHHHHT
T ss_pred eEEEeCCCcchHhhhCHHH--HHHHHHHHHHh
Confidence 23337899997433 2222 23345677764
No 146
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.56 E-value=1.9e-14 Score=146.54 Aligned_cols=232 Identities=13% Similarity=0.148 Sum_probs=135.2
Q ss_pred EEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCcccccc
Q 004839 468 EQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDG 547 (728)
Q Consensus 468 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~ 547 (728)
+...+...+| .+.+. .. +++.|+||++||..+.. ..|......|+++||.|+.+|+||+|.+.....
T Consensus 4 ~~~~~~~~~~-~~~~~---~~----~~~~~~vv~lHG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--- 70 (279)
T 4g9e_A 4 NYHELETSHG-RIAVR---ES----EGEGAPLLMIHGNSSSG--AIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAID--- 70 (279)
T ss_dssp EEEEEEETTE-EEEEE---EC----CCCEEEEEEECCTTCCG--GGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSC---
T ss_pred EEEEEEcCCc-eEEEE---ec----CCCCCeEEEECCCCCch--hHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCC---
Confidence 3445666666 44432 11 13468899999986643 457777788788899999999999997643210
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc--cCCCCC---
Q 004839 548 RRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL--LYPILP--- 622 (728)
Q Consensus 548 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~--~~~~~~--- 622 (728)
.....+++|+.+.+..+++.- +.+++.++|+|+||.+++.++.++|++.+.+++..|........ ......
T Consensus 71 --~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 146 (279)
T 4g9e_A 71 --PDRSYSMEGYADAMTEVMQQL--GIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREEVGQGFKSGPDMAL 146 (279)
T ss_dssp --HHHHSSHHHHHHHHHHHHHHH--TCCCCEEEEETHHHHHHHHHTTTCTTCCEEEEESCCCCCGGGHHHHBCCSTTGGG
T ss_pred --cccCCCHHHHHHHHHHHHHHh--CCCceEEEEECchHHHHHHHHhhCCcceeEEEecCCCCCCCccchhhccchhhhh
Confidence 112236777777777776542 34689999999999999999999999444444444433221100 000000
Q ss_pred -----CCcccc-----cccCCCCCHHHHHHHHcc------------------CcccccccCCCCCeEEEEcCCCCCCCHH
Q 004839 623 -----LIAADY-----EEFGYPGDIDDFHAIRNY------------------SPYDNIQKDVLYPAVLVTSSFNTRFGVW 674 (728)
Q Consensus 623 -----~~~~~~-----~~~g~p~~~~~~~~~~~~------------------sP~~~i~~~~~~P~lli~g~~D~~Vp~~ 674 (728)
+..... ..+..+......+.+... +....+.+ ++.|+|+|+|+.|..||+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~l~i~g~~D~~~~~~ 225 (279)
T 4g9e_A 147 AGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAE-AQLPIAVVNGRDEPFVELD 225 (279)
T ss_dssp GGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHH-CCSCEEEEEETTCSSBCHH
T ss_pred cCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHh-cCCCEEEEEcCCCcccchH
Confidence 000000 001222221111111111 11122344 7899999999999999998
Q ss_pred HHHHHH-HHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHh
Q 004839 675 EAAKWV-ARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKM 725 (728)
Q Consensus 675 ~~~~~~-~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~ 725 (728)
.+.+++ +.+... .+..++++||.... ...-.......+||.+.
T Consensus 226 ~~~~~~~~~~~~~-------~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~~ 269 (279)
T 4g9e_A 226 FVSKVKFGNLWEG-------KTHVIDNAGHAPFR-EAPAEFDAYLARFIRDC 269 (279)
T ss_dssp HHTTCCCSSBGGG-------SCEEETTCCSCHHH-HSHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCCC-------eEEEECCCCcchHH-hCHHHHHHHHHHHHHHh
Confidence 887776 444322 22336899998432 22222344467888764
No 147
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.56 E-value=3.2e-12 Score=139.46 Aligned_cols=204 Identities=14% Similarity=0.125 Sum_probs=143.0
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
.+..++|||||++|||....++. ..|+++|+++|+...+.. ...+..++|||||+.|+|+.... ...+||++++.
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~--~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~--g~~~i~~~d~~ 255 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT--GSLNLYVMDLA 255 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSS--CEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTT--SSCEEEEEETT
T ss_pred cceeeEEcCCCCEEEEEEecCCC--cEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecC--CCceEEEEECC
Confidence 36678899999999999754433 569999999998766543 44678899999999999986542 23579999998
Q ss_pred CCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCc-eEEEEeecCCEEEEEEc
Q 004839 204 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL-AHCIVEHHEGFLYLFTD 282 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~-~~~~~~~dg~~l~~~tn 282 (728)
+++... +.. . ......+.|||||++|++.+.......||++|+.+ ++.+.+...... ....+++||+.|++.+.
T Consensus 256 ~~~~~~-l~~-~-~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~--~~~~~l~~~~~~~~~~~~spdG~~l~~~~~ 330 (415)
T 2hqs_A 256 SGQIRQ-VTD-G-RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING--GAPQRITWEGSQNQDADVSSDGKFMVMVSS 330 (415)
T ss_dssp TCCEEE-CCC-C-SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SCCEECCCSSSEEEEEEECTTSSEEEEEEE
T ss_pred CCCEEe-CcC-C-CCcccceEECCCCCEEEEEECCCCCcEEEEEECCC--CCEEEEecCCCcccCeEECCCCCEEEEEEC
Confidence 765322 222 1 22345689999999999998766667899999987 445555433322 23467899999988876
Q ss_pred CCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCC
Q 004839 283 AAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 283 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
.++ ...|+..+++ . +....+. ... .+..+.+. ++.|++....++...|+++++++
T Consensus 331 ~~g------~~~i~~~d~~-~---~~~~~l~-~~~--~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 331 NGG------QQHIAKQDLA-T---GGVQVLS-STF--LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp CSS------CEEEEEEETT-T---CCEEECC-CSS--SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred cCC------ceEEEEEECC-C---CCEEEec-CCC--CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC
Confidence 543 3578888876 2 3333332 222 34555555 46777777778888999999864
No 148
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.56 E-value=1.6e-13 Score=142.45 Aligned_cols=121 Identities=15% Similarity=0.077 Sum_probs=88.7
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHH-HHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSE-LKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKL 553 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~-~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~ 553 (728)
.||.++.+...-+ ...|.||++||..+.. ..|... ...|+++||.|+.+|+||+|.+...- . ....
T Consensus 8 ~~g~~l~y~~~G~------~~~~~vvllHG~~~~~--~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~----~-~~~~ 74 (298)
T 1q0r_A 8 SGDVELWSDDFGD------PADPALLLVMGGNLSA--LGWPDEFARRLADGGLHVIRYDHRDTGRSTTRD----F-AAHP 74 (298)
T ss_dssp ETTEEEEEEEESC------TTSCEEEEECCTTCCG--GGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCC----T-TTSC
T ss_pred cCCeEEEEEeccC------CCCCeEEEEcCCCCCc--cchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCC----C-CcCC
Confidence 5788876544311 1246899999976543 456554 48899999999999999999764310 0 1123
Q ss_pred CcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 554 NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 554 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
.+++++.+.+..+++.- +.+++.++|||+||.+++.++.++|++++++|+..+..
T Consensus 75 ~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (298)
T 1q0r_A 75 YGFGELAADAVAVLDGW--GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGG 129 (298)
T ss_dssp CCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cCHHHHHHHHHHHHHHh--CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccC
Confidence 46777777777776542 34689999999999999999999999999999987654
No 149
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.56 E-value=4.8e-14 Score=145.32 Aligned_cols=221 Identities=13% Similarity=0.098 Sum_probs=132.0
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCC-CCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGA-YGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKL 553 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~ 553 (728)
.+|.++++... +..|.||++||. .+......|......| ++||.|+++|.||+|.+... . ...
T Consensus 12 ~~g~~l~y~~~--------G~g~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~------~-~~~ 75 (282)
T 1iup_A 12 AAGVLTNYHDV--------GEGQPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVGFGFTDRP------E-NYN 75 (282)
T ss_dssp ETTEEEEEEEE--------CCSSEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTTSTTSCCC------T-TCC
T ss_pred ECCEEEEEEec--------CCCCeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCCCCCCCCC------C-CCC
Confidence 46877765332 123679999994 3322112344455555 67999999999999975321 1 112
Q ss_pred CcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchh------hccCCCCCC----
Q 004839 554 NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN------TLLYPILPL---- 623 (728)
Q Consensus 554 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~------~~~~~~~~~---- 623 (728)
.+++++.+.+..++++- ..+++.++|||+||.+++.++.++|++++++|+.+|...... ..... .+.
T Consensus 76 ~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 152 (282)
T 1iup_A 76 YSKDSWVDHIIGIMDAL--EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGY-TPSIENM 152 (282)
T ss_dssp CCHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTC-CSCHHHH
T ss_pred CCHHHHHHHHHHHHHHh--CCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcC-CCcHHHH
Confidence 46778777777777553 336899999999999999999999999999999887542110 00000 000
Q ss_pred --------------Cccc----ccccCCCCCHHHHHHHHc---------cC-cccccccCCCCCeEEEEcCCCCCCCHHH
Q 004839 624 --------------IAAD----YEEFGYPGDIDDFHAIRN---------YS-PYDNIQKDVLYPAVLVTSSFNTRFGVWE 675 (728)
Q Consensus 624 --------------~~~~----~~~~g~p~~~~~~~~~~~---------~s-P~~~i~~~~~~P~lli~g~~D~~Vp~~~ 675 (728)
.... +.....+.....+..+.. .. +...+.+ ++.|+|+|+|+.|..+|+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lii~G~~D~~~p~~~ 231 (282)
T 1iup_A 153 RNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKT-LPNETLIIHGREDQVVPLSS 231 (282)
T ss_dssp HHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTT-CCSCEEEEEETTCSSSCHHH
T ss_pred HHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhh-cCCCEEEEecCCCCCCCHHH
Confidence 0000 000011110000001100 00 1123444 89999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHHH
Q 004839 676 AAKWVARVRESTIYDPKRPILLNLTTDIVEEN-RYLQCKESALETAFLIK 724 (728)
Q Consensus 676 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~~ 724 (728)
+.++.+.+... .+.+.+++||.... ....+ .....+||.+
T Consensus 232 ~~~~~~~~~~~-------~~~~i~~~gH~~~~e~p~~~--~~~i~~fl~~ 272 (282)
T 1iup_A 232 SLRLGELIDRA-------QLHVFGRCGHWTQIEQTDRF--NRLVVEFFNE 272 (282)
T ss_dssp HHHHHHHCTTE-------EEEEESSCCSCHHHHSHHHH--HHHHHHHHHT
T ss_pred HHHHHHhCCCC-------eEEEECCCCCCccccCHHHH--HHHHHHHHhc
Confidence 98888776532 23337899997433 22222 3345678865
No 150
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.55 E-value=1.5e-13 Score=142.54 Aligned_cols=226 Identities=16% Similarity=0.046 Sum_probs=133.9
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCC-CCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGA-YGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKL 553 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~ 553 (728)
.+|.++.+... + +.|.||++||. ++......|......|+++ |.|+.+|+||+|.+. . ....
T Consensus 23 ~~g~~l~y~~~---g-----~g~~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~-~-------~~~~ 85 (296)
T 1j1i_A 23 AGGVETRYLEA---G-----KGQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLGFGKTA-K-------PDIE 85 (296)
T ss_dssp ETTEEEEEEEE---C-----CSSEEEEECCCSTTCCHHHHHTTTHHHHTTT-SEEEEECCTTSTTSC-C-------CSSC
T ss_pred ECCEEEEEEec---C-----CCCeEEEECCCCCCcchHHHHHHHHHHHhhc-CEEEEECCCCCCCCC-C-------CCCC
Confidence 47877765321 1 23679999996 3333323455556667655 999999999999763 1 1112
Q ss_pred CcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhcc--CCC---CCCCc---
Q 004839 554 NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLL--YPI---LPLIA--- 625 (728)
Q Consensus 554 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~--~~~---~~~~~--- 625 (728)
.+++++.+.+..+++.-.+ .+++.++|+||||.+++.++.++|++++++|+.+|......... ... .+...
T Consensus 86 ~~~~~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (296)
T 1j1i_A 86 YTQDRRIRHLHDFIKAMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMV 164 (296)
T ss_dssp CCHHHHHHHHHHHHHHSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCC-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHH
Confidence 4677777777666654222 26899999999999999999999999999999887642111000 000 00000
Q ss_pred ccccc-cCCCC--CHHH-------------HHHHHc-----------cCcccccccCCCCCeEEEEcCCCCCCCHHHHHH
Q 004839 626 ADYEE-FGYPG--DIDD-------------FHAIRN-----------YSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAK 678 (728)
Q Consensus 626 ~~~~~-~g~p~--~~~~-------------~~~~~~-----------~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~ 678 (728)
..... ...+. ..+. ...+.. +.....+.+ +++|+|+|+|+.|..||+..+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~Lii~G~~D~~~~~~~~~~ 243 (296)
T 1j1i_A 165 HLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRK-VQVPTLVVQGKDDKVVPVETAYK 243 (296)
T ss_dssp HHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTT-CCSCEEEEEETTCSSSCHHHHHH
T ss_pred HHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhc-CCCCEEEEEECCCcccCHHHHHH
Confidence 00000 01110 1100 000100 011123444 89999999999999999999998
Q ss_pred HHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 004839 679 WVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 727 (728)
Q Consensus 679 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~l~ 727 (728)
+.+.+.. ..+.+.+++||.... +..-+......+||.+.++
T Consensus 244 ~~~~~~~-------~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~~ 284 (296)
T 1j1i_A 244 FLDLIDD-------SWGYIIPHCGHWAMI-EHPEDFANATLSFLSLRVD 284 (296)
T ss_dssp HHHHCTT-------EEEEEESSCCSCHHH-HSHHHHHHHHHHHHHHC--
T ss_pred HHHHCCC-------CEEEEECCCCCCchh-cCHHHHHHHHHHHHhccCC
Confidence 8877643 223337899997432 1122223446789987654
No 151
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.55 E-value=8e-14 Score=138.95 Aligned_cols=187 Identities=19% Similarity=0.169 Sum_probs=122.8
Q ss_pred CccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHH----cC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIE----KE 570 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~----~~ 570 (728)
+.|+||++||..+.. ..|. ....|+ +||.|+.+|+||+|.... ....+++++.+.+..+++ +.
T Consensus 15 ~~~~vv~~hG~~~~~--~~~~-~~~~l~-~g~~v~~~d~~g~g~s~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3e0x_A 15 SPNTLLFVHGSGCNL--KIFG-ELEKYL-EDYNCILLDLKGHGESKG---------QCPSTVYGYIDNVANFITNSEVTK 81 (245)
T ss_dssp CSCEEEEECCTTCCG--GGGT-TGGGGC-TTSEEEEECCTTSTTCCS---------CCCSSHHHHHHHHHHHHHHCTTTT
T ss_pred CCCEEEEEeCCcccH--HHHH-HHHHHH-hCCEEEEecCCCCCCCCC---------CCCcCHHHHHHHHHHHHHhhhhHh
Confidence 468999999976644 3455 445554 899999999999997531 122467777777776661 11
Q ss_pred CCCCCcEEEEEeCccHHHHHHHHHh-CCCceeEEEEeCCcccchhh-------ccCCCCC----------CCccccccc-
Q 004839 571 IVKEHKLAGWGYSAGGLLVAAAINC-CPDLFRAVVLEVPFLDATNT-------LLYPILP----------LIAADYEEF- 631 (728)
Q Consensus 571 ~~d~~ri~i~G~S~GG~~~~~~~~~-~p~~f~a~v~~~p~~d~~~~-------~~~~~~~----------~~~~~~~~~- 631 (728)
..+ ++.++|+|+||.+++.++.+ +|+ ++++|+.+|..+.... +...... ........+
T Consensus 82 ~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (245)
T 3e0x_A 82 HQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEKYF 158 (245)
T ss_dssp TCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHHHHHH
T ss_pred hcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHHHHHH
Confidence 122 99999999999999999999 999 9999999998765210 0000000 000000000
Q ss_pred CC-CCCH----HHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCC
Q 004839 632 GY-PGDI----DDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVE 705 (728)
Q Consensus 632 g~-p~~~----~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 705 (728)
.. ...+ ..+..+..++....+.+ ++.|+|+++|+.|..||+..+.++++.+.. ..+..++++||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-------~~~~~~~~~gH~~ 229 (245)
T 3e0x_A 159 ETLEKDPDIMINDLIACKLIDLVDNLKN-IDIPVKAIVAKDELLTLVEYSEIIKKEVEN-------SELKIFETGKHFL 229 (245)
T ss_dssp TTSCSSHHHHHHHHHHHHHCBCGGGGGG-CCSCEEEEEETTCSSSCHHHHHHHHHHSSS-------EEEEEESSCGGGH
T ss_pred HHHhcCcHHHHHHHHHhccccHHHHHHh-CCCCEEEEEeCCCCCCCHHHHHHHHHHcCC-------ceEEEeCCCCcce
Confidence 00 0011 11222344555566666 899999999999999999999999888753 2233378999974
No 152
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.55 E-value=1.2e-13 Score=142.64 Aligned_cols=209 Identities=10% Similarity=-0.019 Sum_probs=127.7
Q ss_pred ccEEEEEcCC-CCCCcCcccHHHH-HHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCC
Q 004839 496 NPGLLHGHGA-YGELLDKRWRSEL-KSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 573 (728)
Q Consensus 496 ~P~vv~~hGg-~~~~~~~~~~~~~-~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 573 (728)
.|.||++||. ++......|.... ..|+++ |.|+++|.||+|.+... .....+++++.+.+..++++- +
T Consensus 33 g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~-~~vi~~D~~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l--~ 102 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNYYRNVGPFVDAG-YRVILKDSPGFNKSDAV-------VMDEQRGLVNARAVKGLMDAL--D 102 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHHTT-CEEEEECCTTSTTSCCC-------CCSSCHHHHHHHHHHHHHHHT--T
T ss_pred CCcEEEECCCCCCCCcHHHHHHHHHHHHhcc-CEEEEECCCCCCCCCCC-------CCcCcCHHHHHHHHHHHHHHh--C
Confidence 3689999996 4333334455556 677665 99999999999976322 111346788877777777542 3
Q ss_pred CCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc---------------cCCCCCCCccccccc-CCC--C
Q 004839 574 EHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL---------------LYPILPLIAADYEEF-GYP--G 635 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~---------------~~~~~~~~~~~~~~~-g~p--~ 635 (728)
.+++.++||||||.+++.++.++|++++++|+.+|........ ..+...........+ ..+ .
T Consensus 103 ~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (286)
T 2puj_A 103 IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLI 182 (286)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGC
T ss_pred CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccC
Confidence 4689999999999999999999999999999988754211000 000000000000000 000 0
Q ss_pred CHHH--------------HHHHH---------ccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCC
Q 004839 636 DIDD--------------FHAIR---------NYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPK 692 (728)
Q Consensus 636 ~~~~--------------~~~~~---------~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~ 692 (728)
..+. ...+. .+.....+.+ ++.|+|+|+|+.|..+|+..+.++.+.+...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~------ 255 (286)
T 2puj_A 183 TEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGE-IKAKTFITWGRDDRFVPLDHGLKLLWNIDDA------ 255 (286)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGG-CCSCEEEEEETTCSSSCTHHHHHHHHHSSSE------
T ss_pred CHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhh-cCCCEEEEEECCCCccCHHHHHHHHHHCCCC------
Confidence 0010 01111 1122234555 8999999999999999999998888777532
Q ss_pred ccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHHH
Q 004839 693 RPILLNLTTDIVEEN-RYLQCKESALETAFLIK 724 (728)
Q Consensus 693 ~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~~ 724 (728)
.+.+++++||.... .... ......+||.+
T Consensus 256 -~~~~i~~~gH~~~~e~p~~--~~~~i~~fl~~ 285 (286)
T 2puj_A 256 -RLHVFSKCGAWAQWEHADE--FNRLVIDFLRH 285 (286)
T ss_dssp -EEEEESSCCSCHHHHTHHH--HHHHHHHHHHH
T ss_pred -eEEEeCCCCCCccccCHHH--HHHHHHHHHhc
Confidence 23337899997432 2222 23335678764
No 153
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.54 E-value=1.8e-13 Score=139.78 Aligned_cols=223 Identities=15% Similarity=0.134 Sum_probs=137.0
Q ss_pred EEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccC
Q 004839 471 DVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRT 550 (728)
Q Consensus 471 ~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~ 550 (728)
.+.+.||.+|.+...-+ +..|+||++||..... ..|......|++ +|.|+.+|.||+|.+...
T Consensus 8 ~~~~~~g~~l~y~~~G~------~~~p~lvl~hG~~~~~--~~w~~~~~~L~~-~~~vi~~D~rG~G~S~~~-------- 70 (266)
T 3om8_A 8 FLATSDGASLAYRLDGA------AEKPLLALSNSIGTTL--HMWDAQLPALTR-HFRVLRYDARGHGASSVP-------- 70 (266)
T ss_dssp EEECTTSCEEEEEEESC------TTSCEEEEECCTTCCG--GGGGGGHHHHHT-TCEEEEECCTTSTTSCCC--------
T ss_pred EEeccCCcEEEEEecCC------CCCCEEEEeCCCccCH--HHHHHHHHHhhc-CcEEEEEcCCCCCCCCCC--------
Confidence 35678999987654311 2358899999865533 456777777765 799999999999976422
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchh---------hccC-CC
Q 004839 551 KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN---------TLLY-PI 620 (728)
Q Consensus 551 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~---------~~~~-~~ 620 (728)
....+++++.+.+..+++.- ..+++.++||||||.+++.++.++|++++++|+..+...+.. .... ..
T Consensus 71 ~~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (266)
T 3om8_A 71 PGPYTLARLGEDVLELLDAL--EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAED 148 (266)
T ss_dssp CSCCCHHHHHHHHHHHHHHT--TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSS
T ss_pred CCCCCHHHHHHHHHHHHHHh--CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHcccc
Confidence 12346777777777666543 235899999999999999999999999999999876432110 0000 00
Q ss_pred CCCCc-----cccc-cc--CCCCCHHH----------------HHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHH
Q 004839 621 LPLIA-----ADYE-EF--GYPGDIDD----------------FHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEA 676 (728)
Q Consensus 621 ~~~~~-----~~~~-~~--g~p~~~~~----------------~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~ 676 (728)
..... .++. .+ ..+...+. ...+...+....+.+ ++.|+|+|+|+.|..+|+..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~-i~~P~Lvi~G~~D~~~~~~~~ 227 (266)
T 3om8_A 149 MSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLAR-IERPTLVIAGAYDTVTAASHG 227 (266)
T ss_dssp SHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGG-CCSCEEEEEETTCSSSCHHHH
T ss_pred HHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcC-CCCCEEEEEeCCCCCCCHHHH
Confidence 00000 0000 00 00100000 011111222234555 899999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHH
Q 004839 677 AKWVARVRESTIYDPKRPILLNLTTDIVEEN-RYLQCKESALETAFLI 723 (728)
Q Consensus 677 ~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~ 723 (728)
+++.+.+... +.++ .+ +||.... .+..+ .....+||.
T Consensus 228 ~~l~~~ip~a------~~~~-i~-~gH~~~~e~p~~~--~~~i~~Fl~ 265 (266)
T 3om8_A 228 ELIAASIAGA------RLVT-LP-AVHLSNVEFPQAF--EGAVLSFLG 265 (266)
T ss_dssp HHHHHHSTTC------EEEE-ES-CCSCHHHHCHHHH--HHHHHHHHT
T ss_pred HHHHHhCCCC------EEEE-eC-CCCCccccCHHHH--HHHHHHHhc
Confidence 9998887643 2333 45 8996433 33332 233456763
No 154
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.54 E-value=3.5e-13 Score=140.80 Aligned_cols=125 Identities=18% Similarity=0.123 Sum_probs=87.0
Q ss_pred EEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccc
Q 004839 469 QYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGR 548 (728)
Q Consensus 469 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~ 548 (728)
...+...||.++.+...-+ ...|.||++||+++......+ ...+...||.|+.+|.||+|.+...
T Consensus 16 ~~~~~~~~g~~l~~~~~g~------~~g~~vvllHG~~~~~~~~~~---~~~~~~~~~~vi~~D~~G~G~S~~~------ 80 (317)
T 1wm1_A 16 SGWLDTGDGHRIYWELSGN------PNGKPAVFIHGGPGGGISPHH---RQLFDPERYKVLLFDQRGCGRSRPH------ 80 (317)
T ss_dssp EEEEECSSSCEEEEEEEEC------TTSEEEEEECCTTTCCCCGGG---GGGSCTTTEEEEEECCTTSTTCBST------
T ss_pred eeEEEcCCCcEEEEEEcCC------CCCCcEEEECCCCCcccchhh---hhhccccCCeEEEECCCCCCCCCCC------
Confidence 3356667898876543321 123568999998764422211 2234457999999999999976321
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 549 RTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 549 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
......+++++.+.+..++++- +.+++.++||||||.+++.++.++|++++++|+..+..
T Consensus 81 ~~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 140 (317)
T 1wm1_A 81 ASLDNNTTWHLVADIERLREMA--GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT 140 (317)
T ss_dssp TCCTTCSHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cccccccHHHHHHHHHHHHHHc--CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCC
Confidence 1112346778877777777652 34689999999999999999999999999999987653
No 155
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.53 E-value=1.6e-13 Score=141.26 Aligned_cols=227 Identities=13% Similarity=0.067 Sum_probs=132.6
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCC-CCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccC
Q 004839 472 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGA-YGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRT 550 (728)
Q Consensus 472 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~ 550 (728)
+...+|.++++... +. ...|+||++||. ++......|......|+++ |.|+.+|+||+|.+...-
T Consensus 11 ~~~~~g~~l~y~~~---g~---~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~------- 76 (285)
T 1c4x_A 11 RFPSGTLASHALVA---GD---PQSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVAPDLIGFGQSEYPE------- 76 (285)
T ss_dssp EECCTTSCEEEEEE---SC---TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTT-SEEEEECCTTSTTSCCCS-------
T ss_pred EEEECCEEEEEEec---CC---CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhC-cEEEEecCCCCCCCCCCC-------
Confidence 34457888765432 10 123779999995 4333334455556677655 999999999999763221
Q ss_pred CCCCcHHHH----HHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchh-----------h
Q 004839 551 KKLNSIKDF----ISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN-----------T 615 (728)
Q Consensus 551 ~~~~~~~D~----~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~-----------~ 615 (728)
....+++++ .+.+..++++- +.+++.++|||+||.+++.++.++|++++++|+.+|...... .
T Consensus 77 ~~~~~~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 154 (285)
T 1c4x_A 77 TYPGHIMSWVGMRVEQILGLMNHF--GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAF 154 (285)
T ss_dssp SCCSSHHHHHHHHHHHHHHHHHHH--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTG
T ss_pred CcccchhhhhhhHHHHHHHHHHHh--CCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHH
Confidence 112356666 66555555432 236899999999999999999999999999999987642110 0
Q ss_pred ccCCCCCCCcccccc-cCCCC----CH-------------HHHHHHHc-------c-----CcccccccCCCCCeEEEEc
Q 004839 616 LLYPILPLIAADYEE-FGYPG----DI-------------DDFHAIRN-------Y-----SPYDNIQKDVLYPAVLVTS 665 (728)
Q Consensus 616 ~~~~~~~~~~~~~~~-~g~p~----~~-------------~~~~~~~~-------~-----sP~~~i~~~~~~P~lli~g 665 (728)
+..+........... ...+. .. +....+.. + .+...+.+ ++.|+|+|+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lii~G 233 (285)
T 1c4x_A 155 YADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGR-LPHDVLVFHG 233 (285)
T ss_dssp GGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTT-CCSCEEEEEE
T ss_pred hccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhcc-CCCCEEEEEe
Confidence 000000000000000 01110 00 00011100 0 01123444 8999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHHH
Q 004839 666 SFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN-RYLQCKESALETAFLIK 724 (728)
Q Consensus 666 ~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~~ 724 (728)
..|..||+..+.++++.+.. ..+.+.+++||.... .... ......+||.+
T Consensus 234 ~~D~~~p~~~~~~~~~~~~~-------~~~~~i~~~gH~~~~e~p~~--~~~~i~~fl~~ 284 (285)
T 1c4x_A 234 RQDRIVPLDTSLYLTKHLKH-------AELVVLDRCGHWAQLERWDA--MGPMLMEHFRA 284 (285)
T ss_dssp TTCSSSCTHHHHHHHHHCSS-------EEEEEESSCCSCHHHHSHHH--HHHHHHHHHHC
T ss_pred CCCeeeCHHHHHHHHHhCCC-------ceEEEeCCCCcchhhcCHHH--HHHHHHHHHhc
Confidence 99999999999888877643 223337899997432 2222 23335677753
No 156
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.52 E-value=8.3e-14 Score=143.91 Aligned_cols=123 Identities=14% Similarity=0.057 Sum_probs=91.1
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCC
Q 004839 472 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTK 551 (728)
Q Consensus 472 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~ 551 (728)
+...||.++++... ++.|.||++||..+.. ..|......|++ ||.|+.+|+||+|.+...-.. ...
T Consensus 17 ~~~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~--~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~---~~~ 82 (306)
T 3r40_A 17 WINTSSGRIFARVG--------GDGPPLLLLHGFPQTH--VMWHRVAPKLAE-RFKVIVADLPGYGWSDMPESD---EQH 82 (306)
T ss_dssp EECCTTCCEEEEEE--------ECSSEEEEECCTTCCG--GGGGGTHHHHHT-TSEEEEECCTTSTTSCCCCCC---TTC
T ss_pred EEEeCCEEEEEEEc--------CCCCeEEEECCCCCCH--HHHHHHHHHhcc-CCeEEEeCCCCCCCCCCCCCC---ccc
Confidence 34558888876542 1347899999986644 456667777877 999999999999976433110 000
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 552 KLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 552 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
...+++++.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+.+|..
T Consensus 83 ~~~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 139 (306)
T 3r40_A 83 TPYTKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILP 139 (306)
T ss_dssp GGGSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCC
Confidence 134678887777777765 244689999999999999999999999999999999753
No 157
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.52 E-value=1.2e-13 Score=145.70 Aligned_cols=206 Identities=16% Similarity=0.141 Sum_probs=126.0
Q ss_pred ccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004839 496 NPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 575 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 575 (728)
.|+||++||..+.. ..|......| ||.|+++|+||+|.+... .....+++++.+.+..+++. .+.+
T Consensus 81 ~~~vv~~hG~~~~~--~~~~~~~~~l---g~~Vi~~D~~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l~~~ 146 (330)
T 3p2m_A 81 APRVIFLHGGGQNA--HTWDTVIVGL---GEPALAVDLPGHGHSAWR-------EDGNYSPQLNSETLAPVLRE--LAPG 146 (330)
T ss_dssp CCSEEEECCTTCCG--GGGHHHHHHS---CCCEEEECCTTSTTSCCC-------SSCBCCHHHHHHHHHHHHHH--SSTT
T ss_pred CCeEEEECCCCCcc--chHHHHHHHc---CCeEEEEcCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHH--hCCC
Confidence 47899999986643 3455555444 999999999999865321 12335677877777777754 2457
Q ss_pred cEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc---cCC------------CCCCCccccccc--CCC-CCH
Q 004839 576 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL---LYP------------ILPLIAADYEEF--GYP-GDI 637 (728)
Q Consensus 576 ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~---~~~------------~~~~~~~~~~~~--g~p-~~~ 637 (728)
++.++|+|+||.+++.++.++|++++++|+.+|........ ... ..+........+ ..+ ...
T Consensus 147 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (330)
T 3p2m_A 147 AEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDV 226 (330)
T ss_dssp CCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHHHHCTTSCH
T ss_pred CcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHHhcCCCCCH
Confidence 89999999999999999999999999999998765422110 000 000000000000 001 011
Q ss_pred HHH-HHHHcc-------------Cc----------ccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCc
Q 004839 638 DDF-HAIRNY-------------SP----------YDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKR 693 (728)
Q Consensus 638 ~~~-~~~~~~-------------sP----------~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~ 693 (728)
... ..+... .. ...+.+ +++|+|+|+|+.|..||+..+.++.+.+... .
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~PvLii~G~~D~~v~~~~~~~l~~~~~~~------~ 299 (330)
T 3p2m_A 227 KSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDA-LSAPITLVRGGSSGFVTDQDTAELHRRATHF------R 299 (330)
T ss_dssp HHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHH-CCSCEEEEEETTCCSSCHHHHHHHHHHCSSE------E
T ss_pred HHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhh-CCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC------e
Confidence 111 111100 00 012344 7999999999999999999999888877432 1
Q ss_pred cEEEEcCCCCCCCc-hhhhHHHHHHHHHHHHH
Q 004839 694 PILLNLTTDIVEEN-RYLQCKESALETAFLIK 724 (728)
Q Consensus 694 ~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~~ 724 (728)
.+.+++++||.... .... ......+||.+
T Consensus 300 ~~~~i~~~gH~~~~e~p~~--~~~~i~~fl~~ 329 (330)
T 3p2m_A 300 GVHIVEKSGHSVQSDQPRA--LIEIVRGVLDT 329 (330)
T ss_dssp EEEEETTCCSCHHHHCHHH--HHHHHHHHTTC
T ss_pred eEEEeCCCCCCcchhCHHH--HHHHHHHHHhc
Confidence 13337899997533 2222 23345667653
No 158
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.52 E-value=5.6e-13 Score=138.47 Aligned_cols=118 Identities=14% Similarity=0.060 Sum_probs=86.7
Q ss_pred cEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHH
Q 004839 478 ISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIK 557 (728)
Q Consensus 478 ~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~ 557 (728)
.++++...-+. + ..|.||++||.++.. ..|...+..|+++||.|+++|.||+|.+... ......+++
T Consensus 33 ~~l~y~~~G~~----~-~g~~vvllHG~~~~~--~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~------~~~~~~~~~ 99 (297)
T 2xt0_A 33 LRMHYVDEGPR----D-AEHTFLCLHGEPSWS--FLYRKMLPVFTAAGGRVVAPDLFGFGRSDKP------TDDAVYTFG 99 (297)
T ss_dssp CCEEEEEESCT----T-CSCEEEEECCTTCCG--GGGTTTHHHHHHTTCEEEEECCTTSTTSCEE------SCGGGCCHH
T ss_pred eEEEEEEccCC----C-CCCeEEEECCCCCcc--eeHHHHHHHHHhCCcEEEEeCCCCCCCCCCC------CCcccCCHH
Confidence 77775432111 1 147799999986643 4577778889999999999999999976321 111134677
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 558 DFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 558 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
++.+.+..+++.- +.+++.++||||||.+++.++.++|++++++|+..+..
T Consensus 100 ~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~ 150 (297)
T 2xt0_A 100 FHRRSLLAFLDAL--QLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTAL 150 (297)
T ss_dssp HHHHHHHHHHHHH--TCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCC
T ss_pred HHHHHHHHHHHHh--CCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCC
Confidence 7776666666542 23689999999999999999999999999999988743
No 159
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.51 E-value=8.2e-14 Score=140.00 Aligned_cols=203 Identities=11% Similarity=0.037 Sum_probs=123.9
Q ss_pred CccEEEEEcCCCCCCcCcccH----HHHHHHHHCCeEEEEEcCCCC---------------------CCCCCcccccccc
Q 004839 495 QNPGLLHGHGAYGELLDKRWR----SELKSLLDRGWVVAFADVRGG---------------------GGGGKKWHHDGRR 549 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~----~~~~~l~~~Gy~v~~~d~RG~---------------------g~~G~~~~~~~~~ 549 (728)
+.|+||++||..++. ..|. .....|.++||.|+.+|.|+. |.+ ..|.....
T Consensus 4 ~~~~vl~lHG~g~~~--~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~-~~w~~~~~- 79 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNG--KVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVN-RAWFYHSE- 79 (243)
T ss_dssp CCCEEEEECCTTCCH--HHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCC-EESSCCCS-
T ss_pred cCceEEEeCCCCccH--HHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCC-cccccCCC-
Confidence 468999999865433 2333 345667777999999999932 221 23432111
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCC------CceeEEEEeCCcccchhhccCCCCCC
Q 004839 550 TKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCP------DLFRAVVLEVPFLDATNTLLYPILPL 623 (728)
Q Consensus 550 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p------~~f~a~v~~~p~~d~~~~~~~~~~~~ 623 (728)
.....|+.+++++|.+....+..+++|+|+|+||.+++.++.+++ ..+++++..+|+....... ..+-
T Consensus 80 ---~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~---~~~~ 153 (243)
T 1ycd_A 80 ---ISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP---EHPG 153 (243)
T ss_dssp ---SGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT---TSTT
T ss_pred ---CcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc---cccc
Confidence 112445556666665432234578999999999999999988643 2577888877765432110 0000
Q ss_pred CcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCC-CCCCCccEEEEcCCC
Q 004839 624 IAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVREST-IYDPKRPILLNLTTD 702 (728)
Q Consensus 624 ~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~g 702 (728)
. ..+. . .+ . ..+..+.+ +++|+|++||..|..||+.++.++++.++..+ ... ....++.+++|
T Consensus 154 ~----~~~~----~-~~---~--~~~~~~~~-~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~g 217 (243)
T 1ycd_A 154 E----LRIT----E-KF---R--DSFAVKPD-MKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNK-EKVLAYEHPGG 217 (243)
T ss_dssp C----EEEC----G-GG---T--TTTCCCTT-CCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCT-TTEEEEEESSS
T ss_pred c----cccc----h-hH---H--HhccCccc-CCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccc-cccEEEecCCC
Confidence 0 0000 0 00 0 12223343 78999999999999999999999999998751 100 01222367889
Q ss_pred CCCCchhhhHHHHHHHHHHHHHhh
Q 004839 703 IVEENRYLQCKESALETAFLIKMM 726 (728)
Q Consensus 703 H~~~~~~~~~~~~~~~~afl~~~l 726 (728)
|...... .......+||.+++
T Consensus 218 H~~~~~~---~~~~~i~~fl~~~~ 238 (243)
T 1ycd_A 218 HMVPNKK---DIIRPIVEQITSSL 238 (243)
T ss_dssp SSCCCCH---HHHHHHHHHHHHHH
T ss_pred CcCCchH---HHHHHHHHHHHHhh
Confidence 9865432 24555678998876
No 160
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.51 E-value=2e-13 Score=140.59 Aligned_cols=118 Identities=14% Similarity=0.031 Sum_probs=88.4
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.||.++.+...-+ ...|+||++||..+.. ..|......|+ +||.|+.+|+||+|..... ....
T Consensus 17 ~~g~~l~~~~~g~------~~~~~vl~lHG~~~~~--~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~--------~~~~ 79 (299)
T 3g9x_A 17 VLGERMHYVDVGP------RDGTPVLFLHGNPTSS--YLWRNIIPHVA-PSHRCIAPDLIGMGKSDKP--------DLDY 79 (299)
T ss_dssp ETTEEEEEEEESC------SSSCCEEEECCTTCCG--GGGTTTHHHHT-TTSCEEEECCTTSTTSCCC--------CCCC
T ss_pred eCCeEEEEEecCC------CCCCEEEEECCCCccH--HHHHHHHHHHc-cCCEEEeeCCCCCCCCCCC--------CCcc
Confidence 3788877644311 1247899999976644 34555666664 6999999999999975322 1135
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLD 611 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d 611 (728)
+++++.+.+..+++.- +.+++.++|+|+||.+++.++.++|++++++|+.+++..
T Consensus 80 ~~~~~~~~~~~~~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 134 (299)
T 3g9x_A 80 FFDDHVRYLDAFIEAL--GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRP 134 (299)
T ss_dssp CHHHHHHHHHHHHHHT--TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCC
T ss_pred cHHHHHHHHHHHHHHh--CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcc
Confidence 7888888888877653 446899999999999999999999999999999885443
No 161
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.51 E-value=2.7e-13 Score=138.27 Aligned_cols=221 Identities=16% Similarity=0.116 Sum_probs=135.7
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.+|.++++...-+. +.+.|.||++||..+.. ..|......|++ +|.|+.+|.||+|.+... ....
T Consensus 9 ~~g~~l~y~~~g~~----~~~~~~vvllHG~~~~~--~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~--------~~~~ 73 (266)
T 2xua_A 9 VNGTELHYRIDGER----HGNAPWIVLSNSLGTDL--SMWAPQVAALSK-HFRVLRYDTRGHGHSEAP--------KGPY 73 (266)
T ss_dssp CSSSEEEEEEESCS----SSCCCEEEEECCTTCCG--GGGGGGHHHHHT-TSEEEEECCTTSTTSCCC--------SSCC
T ss_pred ECCEEEEEEEcCCc----cCCCCeEEEecCccCCH--HHHHHHHHHHhc-CeEEEEecCCCCCCCCCC--------CCCC
Confidence 47888876544221 11247899999965533 356666777765 599999999999976322 1224
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchh------h---ccCCCCC-CC
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN------T---LLYPILP-LI 624 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~------~---~~~~~~~-~~ 624 (728)
+++++.+.+..+++.- ..+++.++|||+||.+++.++.++|++++++|+.+|...... . ....... ..
T Consensus 74 ~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (266)
T 2xua_A 74 TIEQLTGDVLGLMDTL--KIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALA 151 (266)
T ss_dssp CHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHH
T ss_pred CHHHHHHHHHHHHHhc--CCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHH
Confidence 6777777777776542 235899999999999999999999999999999887543210 0 0000000 00
Q ss_pred ccccccc-C------CC------------CCHHH----HHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHH
Q 004839 625 AADYEEF-G------YP------------GDIDD----FHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVA 681 (728)
Q Consensus 625 ~~~~~~~-g------~p------------~~~~~----~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~ 681 (728)
......+ . .+ ..... ...+........+.+ +++|+|+|+|+.|..+|+..+.++.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lvi~G~~D~~~~~~~~~~~~~ 230 (266)
T 2xua_A 152 DAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPG-IKVPALVISGTHDLAATPAQGRELAQ 230 (266)
T ss_dssp HHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGG-CCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred HHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhcc-CCCCEEEEEcCCCCcCCHHHHHHHHH
Confidence 0000000 0 00 00000 111222333344555 89999999999999999999988887
Q ss_pred HHHhCCCCCCCccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHH
Q 004839 682 RVRESTIYDPKRPILLNLTTDIVEEN-RYLQCKESALETAFLI 723 (728)
Q Consensus 682 ~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~ 723 (728)
.+... .+.+++ +||.... .... ......+||.
T Consensus 231 ~~~~~-------~~~~~~-~gH~~~~e~p~~--~~~~i~~fl~ 263 (266)
T 2xua_A 231 AIAGA-------RYVELD-ASHISNIERADA--FTKTVVDFLT 263 (266)
T ss_dssp HSTTC-------EEEEES-CCSSHHHHTHHH--HHHHHHHHHT
T ss_pred hCCCC-------EEEEec-CCCCchhcCHHH--HHHHHHHHHH
Confidence 77542 233368 9997533 2222 2334567774
No 162
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.51 E-value=6.2e-13 Score=139.08 Aligned_cols=118 Identities=16% Similarity=0.081 Sum_probs=87.5
Q ss_pred cEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHH
Q 004839 478 ISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIK 557 (728)
Q Consensus 478 ~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~ 557 (728)
.++++...-+. + +.|.||++||.+++. ..|......|+++||.|+++|.||+|.+... ......+++
T Consensus 34 ~~l~y~~~G~~----~-~g~~vvllHG~~~~~--~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~------~~~~~y~~~ 100 (310)
T 1b6g_A 34 LRAHYLDEGNS----D-AEDVFLCLHGEPTWS--YLYRKMIPVFAESGARVIAPDFFGFGKSDKP------VDEEDYTFE 100 (310)
T ss_dssp CEEEEEEEECT----T-CSCEEEECCCTTCCG--GGGTTTHHHHHHTTCEEEEECCTTSTTSCEE------SCGGGCCHH
T ss_pred eEEEEEEeCCC----C-CCCEEEEECCCCCch--hhHHHHHHHHHhCCCeEEEeCCCCCCCCCCC------CCcCCcCHH
Confidence 78776543221 1 147899999986644 4677778889999999999999999976321 111234677
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 558 DFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 558 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
++.+.+..++++- +-+++.++|||+||.+++.++.++|++++++|+..+..
T Consensus 101 ~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~ 151 (310)
T 1b6g_A 101 FHRNFLLALIERL--DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXL 151 (310)
T ss_dssp HHHHHHHHHHHHH--TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCC
T ss_pred HHHHHHHHHHHHc--CCCCEEEEEcChHHHHHHHHHHhChHhheEEEEecccc
Confidence 7777666666542 22689999999999999999999999999999988743
No 163
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.51 E-value=1.1e-12 Score=136.61 Aligned_cols=125 Identities=18% Similarity=0.129 Sum_probs=87.1
Q ss_pred EEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccc
Q 004839 469 QYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGR 548 (728)
Q Consensus 469 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~ 548 (728)
...+...||..+++...-+ ...|.||++||+++......+ ...|..+||.|+++|.||+|.+...
T Consensus 13 ~~~~~~~~g~~l~y~~~G~------~~g~pvvllHG~~~~~~~~~~---~~~~~~~~~~vi~~D~~G~G~S~~~------ 77 (313)
T 1azw_A 13 QGSLKVDDRHTLYFEQCGN------PHGKPVVMLHGGPGGGCNDKM---RRFHDPAKYRIVLFDQRGSGRSTPH------ 77 (313)
T ss_dssp EEEEECSSSCEEEEEEEEC------TTSEEEEEECSTTTTCCCGGG---GGGSCTTTEEEEEECCTTSTTSBST------
T ss_pred cceEEcCCCCEEEEEecCC------CCCCeEEEECCCCCccccHHH---HHhcCcCcceEEEECCCCCcCCCCC------
Confidence 3446666898877543321 123568999998764422211 2234457999999999999976321
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 549 RTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 549 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
......+++++.+.+..++++- .-+++.++||||||.+++.++.++|++++++|+..+..
T Consensus 78 ~~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 78 ADLVDNTTWDLVADIERLRTHL--GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp TCCTTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cccccccHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhChhheeEEEEecccc
Confidence 1112346778877777777653 23589999999999999999999999999999987653
No 164
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.51 E-value=1.6e-11 Score=133.84 Aligned_cols=251 Identities=11% Similarity=0.093 Sum_probs=165.1
Q ss_pred CCCCCEEEEEEEcCCCc-EEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCcee
Q 004839 132 SPDHKFLAYTMYDKDND-YFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDA 209 (728)
Q Consensus 132 SPDG~~lA~~~~~~g~e-~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~~~ 209 (728)
.+.+++|||.....+++ ..+|+++|++++....+.. ...+..++|||||+.|+|+..+. ....|+++|+.+++...
T Consensus 140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~--~~~~i~~~d~~tg~~~~ 217 (415)
T 2hqs_A 140 GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES--GRSALVIQTLANGAVRQ 217 (415)
T ss_dssp CCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTTCCEEE
T ss_pred CcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecC--CCcEEEEEECCCCcEEE
Confidence 35688999987654321 2679999999776555443 44678899999999999987543 23589999998875332
Q ss_pred EEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCc-eEEEEeecCCEEEEEEcCCccCC
Q 004839 210 LLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL-AHCIVEHHEGFLYLFTDAAKEGQ 288 (728)
Q Consensus 210 lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~-~~~~~~~dg~~l~~~tn~~~~~~ 288 (728)
+.... .....+.|||||++|++.........||++|+.+ ++.+.+...... ....+++||+.|++.++.++
T Consensus 218 -l~~~~--~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~--~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g--- 289 (415)
T 2hqs_A 218 -VASFP--RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS--GQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAG--- 289 (415)
T ss_dssp -EECCS--SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT--CCEEECCCCSSCEEEEEECTTSSEEEEEECTTS---
T ss_pred -eecCC--CcccCEEEcCCCCEEEEEEecCCCceEEEEECCC--CCEEeCcCCCCcccceEECCCCCEEEEEECCCC---
Confidence 32222 2345689999999999888776678899999987 455666544332 34567899999999887543
Q ss_pred CCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCCCCCCcceeeccccccc
Q 004839 289 EADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHF 366 (728)
Q Consensus 289 ~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~ 366 (728)
..+|+.+++. . ...+.+... +..+..+.+. ++.|++....++...|+++++.+++ . ..
T Consensus 290 ---~~~i~~~d~~-~---~~~~~l~~~--~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~------~-----~~ 349 (415)
T 2hqs_A 290 ---RPQVYKVNIN-G---GAPQRITWE--GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG------V-----QV 349 (415)
T ss_dssp ---SCEEEEEETT-S---SCCEECCCS--SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC------E-----EE
T ss_pred ---CcEEEEEECC-C---CCEEEEecC--CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC------E-----EE
Confidence 2578888876 2 223333222 2344455554 4678887777777899999987643 1 11
Q ss_pred ccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEe
Q 004839 367 LPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQ 417 (728)
Q Consensus 367 ~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~~ 417 (728)
+.....+.. ..+++++..+++... ......+|.+|+.++..+.|..
T Consensus 350 l~~~~~~~~----~~~spdg~~l~~~s~-~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 350 LSSTFLDET----PSLAPNGTMVIYSSS-QGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp CCCSSSCEE----EEECTTSSEEEEEEE-ETTEEEEEEEETTSCCEEECCC
T ss_pred ecCCCCcCC----eEEcCCCCEEEEEEc-CCCccEEEEEECCCCcEEEeeC
Confidence 111112222 234567777766543 3334589999998777666543
No 165
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.50 E-value=4.1e-13 Score=138.51 Aligned_cols=207 Identities=11% Similarity=0.007 Sum_probs=124.6
Q ss_pred cEEEEEcCC-CCCCcCcccHHHH-HHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCC
Q 004839 497 PGLLHGHGA-YGELLDKRWRSEL-KSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 574 (728)
Q Consensus 497 P~vv~~hGg-~~~~~~~~~~~~~-~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 574 (728)
|.||++||. ++......|.... ..|++ +|.|+.+|+||+|.+.... ....+++++.+.+..++++- +.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~l~~l--~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEA-GYRVILLDCPGWGKSDSVV-------NSGSRSDLNARILKSVVDQL--DI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHT-TCEEEEECCTTSTTSCCCC-------CSSCHHHHHHHHHHHHHHHT--TC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhc-CCeEEEEcCCCCCCCCCCC-------ccccCHHHHHHHHHHHHHHh--CC
Confidence 389999995 3322223455555 55554 5999999999999764321 11346788887777777642 34
Q ss_pred CcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc---------------cCCCCCCCcccccc-cCCC--CC
Q 004839 575 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL---------------LYPILPLIAADYEE-FGYP--GD 636 (728)
Q Consensus 575 ~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~---------------~~~~~~~~~~~~~~-~g~p--~~ 636 (728)
+++.++|||+||.+++.++.++|++++++|+.+|........ .............. ...+ ..
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLT 186 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCC
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCC
Confidence 689999999999999999999999999999988754211000 00000000000000 0011 00
Q ss_pred HH--------------HHHHHH-c--------cCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCc
Q 004839 637 ID--------------DFHAIR-N--------YSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKR 693 (728)
Q Consensus 637 ~~--------------~~~~~~-~--------~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~ 693 (728)
.+ ....+. . ......+.+ +++|+|+|+|+.|..||+..+.++++.+...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~------- 258 (289)
T 1u2e_A 187 DALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAE-IKAQTLIVWGRNDRFVPMDAGLRLLSGIAGS------- 258 (289)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGG-CCSCEEEEEETTCSSSCTHHHHHHHHHSTTC-------
T ss_pred HHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhh-cCCCeEEEeeCCCCccCHHHHHHHHhhCCCc-------
Confidence 01 011010 0 112234555 8999999999999999999999888877532
Q ss_pred cEEEEcCCCCCCCc-hhhhHHHHHHHHHHHH
Q 004839 694 PILLNLTTDIVEEN-RYLQCKESALETAFLI 723 (728)
Q Consensus 694 ~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~ 723 (728)
.+..++++||.... ....+ .....+||.
T Consensus 259 ~~~~i~~~gH~~~~e~p~~~--~~~i~~fl~ 287 (289)
T 1u2e_A 259 ELHIFRDCGHWAQWEHADAF--NQLVLNFLA 287 (289)
T ss_dssp EEEEESSCCSCHHHHTHHHH--HHHHHHHHT
T ss_pred EEEEeCCCCCchhhcCHHHH--HHHHHHHhc
Confidence 23337899997432 22222 233466764
No 166
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.50 E-value=1e-13 Score=142.63 Aligned_cols=121 Identities=13% Similarity=0.017 Sum_probs=87.3
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCC
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKL 553 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~ 553 (728)
..+|.++.+... ++.|+||++||..+.. ..|......|++ +|.|+.+|+||+|.+...-. .....
T Consensus 14 ~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~--~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~----~~~~~ 78 (297)
T 2qvb_A 14 EIAGKRMAYIDE--------GKGDAIVFQHGNPTSS--YLWRNIMPHLEG-LGRLVACDLIGMGASDKLSP----SGPDR 78 (297)
T ss_dssp EETTEEEEEEEE--------SSSSEEEEECCTTCCG--GGGTTTGGGGTT-SSEEEEECCTTSTTSCCCSS----CSTTS
T ss_pred EECCEEEEEEec--------CCCCeEEEECCCCchH--HHHHHHHHHHhh-cCeEEEEcCCCCCCCCCCCC----ccccC
Confidence 347877765432 1248999999986644 345555566655 59999999999997532210 01112
Q ss_pred CcHHHHHHHHHHHHHcCCCCC-CcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 004839 554 NSIKDFISCARFLIEKEIVKE-HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLD 611 (728)
Q Consensus 554 ~~~~D~~~~~~~l~~~~~~d~-~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d 611 (728)
.+++++.+.+..+++.- +. +++.++|+|+||.+++.++.++|++++++|+.+|...
T Consensus 79 ~~~~~~~~~~~~~l~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 135 (297)
T 2qvb_A 79 YSYGEQRDFLFALWDAL--DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVT 135 (297)
T ss_dssp SCHHHHHHHHHHHHHHT--TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCS
T ss_pred cCHHHHHHHHHHHHHHc--CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccC
Confidence 46777777777776542 34 7899999999999999999999999999999998764
No 167
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.50 E-value=7e-13 Score=127.81 Aligned_cols=171 Identities=11% Similarity=0.026 Sum_probs=117.4
Q ss_pred CccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 574 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 574 (728)
+.|.||++||..+... ..|......++..+|. ++.+|.+ ..+++++.+.+..++++ .+
T Consensus 16 ~~~~vv~~HG~~~~~~-~~~~~~~~~~~~~~~~---v~~~~~~---------------~~~~~~~~~~~~~~~~~--~~- 73 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDD-EHWQSHWERRFPHWQR---IRQREWY---------------QADLDRWVLAIRRELSV--CT- 73 (191)
T ss_dssp TTCEEEEECCTTCCCT-TSHHHHHHHHCTTSEE---CCCSCCS---------------SCCHHHHHHHHHHHHHT--CS-
T ss_pred CCceEEEECCCCCCch-hhHHHHHHHhcCCeEE---EeccCCC---------------CcCHHHHHHHHHHHHHh--cC-
Confidence 4588999999765432 2444444444444544 4666633 23678888888777765 23
Q ss_pred CcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCccccccc
Q 004839 575 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQK 654 (728)
Q Consensus 575 ~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~ 654 (728)
+++.++|+|+||.+++.++.++|++++++|+.+|.......+ +.. ..+.+
T Consensus 74 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-----------------~~~-------------~~~~~ 123 (191)
T 3bdv_A 74 QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFEI-----------------DDR-------------IQASP 123 (191)
T ss_dssp SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGTC-----------------TTT-------------SCSSC
T ss_pred CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccccC-----------------ccc-------------ccccc
Confidence 799999999999999999999999999999999976543110 000 22333
Q ss_pred CCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCch--hhhHHHHHHHHHHHHHhh
Q 004839 655 DVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENR--YLQCKESALETAFLIKMM 726 (728)
Q Consensus 655 ~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~~~afl~~~l 726 (728)
++.|+++++|+.|..||+.+++++++.+ + ..+..++++||..... ...-+......+||.+..
T Consensus 124 -~~~P~lii~g~~D~~~~~~~~~~~~~~~---~-----~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~~ 188 (191)
T 3bdv_A 124 -LSVPTLTFASHNDPLMSFTRAQYWAQAW---D-----SELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEILI 188 (191)
T ss_dssp -CSSCEEEEECSSBTTBCHHHHHHHHHHH---T-----CEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTTC
T ss_pred -CCCCEEEEecCCCCcCCHHHHHHHHHhc---C-----CcEEEeCCCCcccccccchhHHHHHHHHHHHHHHhc
Confidence 7889999999999999999999999887 2 1233378999986431 122223355667776543
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.50 E-value=9.5e-13 Score=141.67 Aligned_cols=257 Identities=9% Similarity=0.004 Sum_probs=158.3
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCcc-cee-eeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA-VRV-SNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~-~~~-~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
+..++|||||++|||..+.+|. .+|+++|+++|+..+++.. ... ..+.|||||+.|+|+..+. +||++++.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~--~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~-----~l~~~d~~ 110 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGN--RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL-----NLMKVDLE 110 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSS--CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTT-----EEEEEETT
T ss_pred eecCcCCCCCCEEEEEEecCCC--ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCC-----cEEEEECC
Confidence 5678899999999999876554 4589999999987776542 222 3489999999999986432 79999998
Q ss_pred CCCceeEEeeecCcceEEE-------------------EEEcCCCCEEEEEE--cCCCceEEEEEeCCCCCCCeEEeeec
Q 004839 204 STDEDALLLEESNENVYVN-------------------IRHTKDFHFVCVHT--FSTTSSKVFLINAADPFSGLTLIWEC 262 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~-------------------~~~SpDg~~l~~~~--~~~~~~~l~~~dl~~~~~~~~~l~~~ 262 (728)
+++. ..++..... +... +.++|||+++++.. .......||++|+++ ++.+.+...
T Consensus 111 ~~~~-~~~~~~~~~-~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~--g~~~~~~~~ 186 (396)
T 3c5m_A 111 TLEE-QVIYTVDEE-WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIET--GELEVIHQD 186 (396)
T ss_dssp TCCE-EEEEECCTT-EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTT--CCEEEEEEE
T ss_pred CCCc-EEEEecccc-cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCC--CcEEeeccC
Confidence 7653 333332221 1111 24577777665543 123457899999987 455566544
Q ss_pred CCc-eEEEEee-cCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecC
Q 004839 263 EGL-AHCIVEH-HEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREG 338 (728)
Q Consensus 263 ~~~-~~~~~~~-dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~ 338 (728)
... ....+++ +++.|++.++.... ..+.+|+.++++ ...++.+........+..+.+. ++.|++....+
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~---~~~~~l~~~d~~----~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHD---LVDARMWLVNED----GSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFK 259 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSS---SCSCCCEEEETT----SCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred CcccccceECCCCCCEEEEEecCCCC---CCCceEEEEECC----CCceeEeeccCCCccccceEECCCCCEEEEEecCC
Confidence 332 3345677 77888888763211 112468888765 2344544432223445555555 45677777776
Q ss_pred CeeE--EEEEecCCCCCCcceeecccccccccCCCceeeeecCCCccC-CCcEEEEEEccCCCC--------------ce
Q 004839 339 RTYR--LCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDY-YSSTMRFAISSPVMP--------------DA 401 (728)
Q Consensus 339 g~~~--l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~-~~~~~~~~~ss~~~p--------------~~ 401 (728)
+... |+++++.+++ ... ...++... + .++. ++..+++.. +. .| ..
T Consensus 260 ~~~~~~l~~~d~~~g~---~~~-------l~~~~~~~--~----~~s~~dg~~l~~~~-~~-~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 260 GQTDRVIYKANPETLE---NEE-------VMVMPPCS--H----LMSNFDGSLMVGDG-CD-APVDVADADSYNIENDPF 321 (396)
T ss_dssp TTCCEEEEEECTTTCC---EEE-------EEECCSEE--E----EEECSSSSEEEEEE-CC-C----------CCCCCCE
T ss_pred CCccceEEEEECCCCC---eEE-------eeeCCCCC--C----CccCCCCceEEEec-CC-cceeeccccccccCCCCc
Confidence 6655 9999986543 111 11233211 1 2345 666555433 22 44 68
Q ss_pred EEEEECCCCeEEEEEee
Q 004839 402 VVDYDLSYGKWNIIQQQ 418 (728)
Q Consensus 402 ~~~~~~~~~~~~~l~~~ 418 (728)
+|.+|+.+++.+.|...
T Consensus 322 i~~~d~~~~~~~~l~~~ 338 (396)
T 3c5m_A 322 LYVLNTKAKSAQKLCKH 338 (396)
T ss_dssp EEEEETTTTBCCEEEEC
T ss_pred EEEEecccCceEEccCC
Confidence 99999998887666543
No 169
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.49 E-value=2.9e-13 Score=142.85 Aligned_cols=126 Identities=15% Similarity=0.097 Sum_probs=85.0
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHH-CCeEEEEEcCCCCCCCCCccccccccCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRTKKL 553 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~-~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~ 553 (728)
.+|.++.+...-+.+. +.+.+.||++||+++.. ..|......|++ .||.|+.+|.||+|.+...- ......
T Consensus 35 ~~g~~l~y~~~G~~~~--~~~g~plvllHG~~~~~--~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~----~~~~~~ 106 (330)
T 3nwo_A 35 FGDHETWVQVTTPENA--QPHALPLIVLHGGPGMA--HNYVANIAALADETGRTVIHYDQVGCGNSTHLP----DAPADF 106 (330)
T ss_dssp ETTEEEEEEEECCSSC--CTTCCCEEEECCTTTCC--SGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCT----TSCGGG
T ss_pred ecCcEEEEEEecCccC--CCCCCcEEEECCCCCCc--hhHHHHHHHhccccCcEEEEECCCCCCCCCCCC----CCcccc
Confidence 3788887765543211 11123578889987754 345555666776 69999999999999764310 001112
Q ss_pred CcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 554 NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 554 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
.+++++.+.+..+++.- +.+++.++|+||||.+++.++.++|++++++|+..+..
T Consensus 107 ~~~~~~a~dl~~ll~~l--g~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~ 161 (330)
T 3nwo_A 107 WTPQLFVDEFHAVCTAL--GIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPA 161 (330)
T ss_dssp CCHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCS
T ss_pred ccHHHHHHHHHHHHHHc--CCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCc
Confidence 34566555555555432 23689999999999999999999999999999887654
No 170
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.49 E-value=6.2e-13 Score=141.87 Aligned_cols=122 Identities=21% Similarity=0.213 Sum_probs=90.0
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.||.++++...-|++ ...|+||++||..+.. ..|......|+++||.|+.+|+||+|.+... ......
T Consensus 10 ~~g~~l~y~~~G~~~----~~~~~vv~~hG~~~~~--~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~------~~~~~~ 77 (356)
T 2e3j_A 10 CRGTRIHAVADSPPD----QQGPLVVLLHGFPESW--YSWRHQIPALAGAGYRVVAIDQRGYGRSSKY------RVQKAY 77 (356)
T ss_dssp ETTEEEEEEEECCTT----CCSCEEEEECCTTCCG--GGGTTTHHHHHHTTCEEEEECCTTSTTSCCC------CSGGGG
T ss_pred cCCeEEEEEEecCCC----CCCCEEEEECCCCCcH--HHHHHHHHHHHHcCCEEEEEcCCCCCCCCCC------Cccccc
Confidence 478888876543321 2458899999986643 4566677889999999999999999875322 111123
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
+++++.+.+..+++. .+.+++.++|+|+||.+++.++.++|++++++|+.++..
T Consensus 78 ~~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 78 RIKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp SHHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CHHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 566666666666543 245789999999999999999999999999999987654
No 171
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.48 E-value=1.9e-13 Score=150.67 Aligned_cols=143 Identities=12% Similarity=0.098 Sum_probs=92.5
Q ss_pred EEEEEEECCCCcEEEEEEEEcC--CCCCCCCccEEEEEcCCCCCCcCcc-cHHHHH---HHHHCCeEEEEEcCCCC--CC
Q 004839 467 CEQYDVPSHDGISVPLTIIYSP--KYKKENQNPGLLHGHGAYGELLDKR-WRSELK---SLLDRGWVVAFADVRGG--GG 538 (728)
Q Consensus 467 ~~~~~~~s~dG~~i~~~l~~p~--~~~~~~~~P~vv~~hGg~~~~~~~~-~~~~~~---~l~~~Gy~v~~~d~RG~--g~ 538 (728)
.+.-.+...+|..+.+.-++-. +.....+.|+||++||..+...... |..... .|+++||.|+++|.||+ |.
T Consensus 78 ~~~~~~~~~~g~~~~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~ 157 (444)
T 2vat_A 78 ARISLFTLESGVILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGS 157 (444)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSS
T ss_pred eccCCeecCCCCEecceeEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCC
Confidence 3344556677777665332221 1111123588999999876553211 444332 46678999999999994 54
Q ss_pred CCCcccccccc-------CCCCCcHHHHHHHHHHHHHcCCCCCCc-EEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 539 GGKKWHHDGRR-------TKKLNSIKDFISCARFLIEKEIVKEHK-LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 539 ~G~~~~~~~~~-------~~~~~~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
.+..-.....+ .....+++|+.+.+..+++.- ..++ +.++||||||.+++.++.++|++++++|+.+|..
T Consensus 158 S~~~~~~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l--~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~ 235 (444)
T 2vat_A 158 AGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRL--GVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSC 235 (444)
T ss_dssp SSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHH--TCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCS
T ss_pred CCCCCCCcccccccccccccccccHHHHHHHHHHHHHhc--CCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccc
Confidence 32210000000 001247888888887777642 3467 9999999999999999999999999999999876
Q ss_pred c
Q 004839 611 D 611 (728)
Q Consensus 611 d 611 (728)
.
T Consensus 236 ~ 236 (444)
T 2vat_A 236 R 236 (444)
T ss_dssp B
T ss_pred c
Confidence 4
No 172
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.48 E-value=2.2e-13 Score=146.11 Aligned_cols=144 Identities=17% Similarity=0.184 Sum_probs=92.3
Q ss_pred eEEEEE---EECCCCcEEEEE-EEEc-CCCCCCCCccEEEEEcCCCCCCcCc-------ccHHHHH---HHHHCCeEEEE
Q 004839 466 SCEQYD---VPSHDGISVPLT-IIYS-PKYKKENQNPGLLHGHGAYGELLDK-------RWRSELK---SLLDRGWVVAF 530 (728)
Q Consensus 466 ~~~~~~---~~s~dG~~i~~~-l~~p-~~~~~~~~~P~vv~~hGg~~~~~~~-------~~~~~~~---~l~~~Gy~v~~ 530 (728)
..+.+. ++..+|..+.+. +.+. .+.....+.|+||++||..+..... .|..... .|+++||.|++
T Consensus 24 ~~~~~~~~~~~~~~g~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~ 103 (377)
T 2b61_A 24 NVVLFDTQPLTLMLGGKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFIS 103 (377)
T ss_dssp EEEESSSSCEECTTSCEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEE
T ss_pred ChhhcccccccccCCceecceeEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEE
Confidence 344445 666677655432 2121 1111112258999999987654320 1444432 36689999999
Q ss_pred EcCCC-CCCCCCccc-cc--cc---cCCCCCcHHHHHHHHHHHHHcCCCCCCcEE-EEEeCccHHHHHHHHHhCCCceeE
Q 004839 531 ADVRG-GGGGGKKWH-HD--GR---RTKKLNSIKDFISCARFLIEKEIVKEHKLA-GWGYSAGGLLVAAAINCCPDLFRA 602 (728)
Q Consensus 531 ~d~RG-~g~~G~~~~-~~--~~---~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~-i~G~S~GG~~~~~~~~~~p~~f~a 602 (728)
+|+|| +|+....-. .. +. ......+++|+.+.+..+++.- +.+++. ++|+|+||.+++.++.++|+++++
T Consensus 104 ~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 181 (377)
T 2b61_A 104 SNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHL--GISHLKAIIGGSFGGMQANQWAIDYPDFMDN 181 (377)
T ss_dssp ECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHT--TCCCEEEEEEETHHHHHHHHHHHHSTTSEEE
T ss_pred ecCCCCCCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHc--CCcceeEEEEEChhHHHHHHHHHHCchhhhe
Confidence 99999 454321100 00 00 0001357889988888888652 346887 999999999999999999999999
Q ss_pred EEEeCCccc
Q 004839 603 VVLEVPFLD 611 (728)
Q Consensus 603 ~v~~~p~~d 611 (728)
+|+.+|...
T Consensus 182 lvl~~~~~~ 190 (377)
T 2b61_A 182 IVNLCSSIY 190 (377)
T ss_dssp EEEESCCSS
T ss_pred eEEeccCcc
Confidence 999998644
No 173
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.48 E-value=5.8e-13 Score=140.09 Aligned_cols=121 Identities=22% Similarity=0.238 Sum_probs=86.5
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCC
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKL 553 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~ 553 (728)
..+|.++.+... + +.|.||++||.++.. ..|...+..|+++||.|+++|.||+|.+...-. .....
T Consensus 17 ~~~g~~l~y~~~---G-----~g~~vvllHG~~~~~--~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~----~~~~~ 82 (328)
T 2cjp_A 17 AVNGLNMHLAEL---G-----EGPTILFIHGFPELW--YSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPL----NDPSK 82 (328)
T ss_dssp EETTEEEEEEEE---C-----SSSEEEEECCTTCCG--GGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCT----TCGGG
T ss_pred cCCCcEEEEEEc---C-----CCCEEEEECCCCCch--HHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCc----CCccc
Confidence 347877765432 1 247899999987643 567778888989999999999999997632100 01112
Q ss_pred CcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCC
Q 004839 554 NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVP 608 (728)
Q Consensus 554 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p 608 (728)
.+++++.+.+..+++.-..+.+++.++||||||.+++.++.++|++++++|+.++
T Consensus 83 ~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~ 137 (328)
T 2cjp_A 83 FSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSV 137 (328)
T ss_dssp GSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEcc
Confidence 3556666555555543111246899999999999999999999999999999774
No 174
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.48 E-value=6.9e-13 Score=137.28 Aligned_cols=224 Identities=13% Similarity=0.055 Sum_probs=133.6
Q ss_pred CCCC-cEEEEEEEEcCCCCCCCCccEEEEEcCC-CCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCC
Q 004839 474 SHDG-ISVPLTIIYSPKYKKENQNPGLLHGHGA-YGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTK 551 (728)
Q Consensus 474 s~dG-~~i~~~l~~p~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~ 551 (728)
..+| .++++... + +++.|.||++||. ++......|......|+++ |.|+++|.||+|.+... ..
T Consensus 19 ~~~g~~~l~y~~~---G---~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-------~~ 84 (291)
T 2wue_A 19 DVDGPLKLHYHEA---G---VGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGYGHSDKR-------AE 84 (291)
T ss_dssp ESSSEEEEEEEEE---C---TTCSSEEEEECCCCTTCCHHHHTTTTHHHHTTT-SEEEEECCTTSTTSCCC-------SC
T ss_pred EeCCcEEEEEEec---C---CCCCCcEEEECCCCCccchHHHHHHHHHHHHhc-CEEEEECCCCCCCCCCC-------CC
Confidence 3578 78775432 2 1334689999996 4433334566566777665 99999999999976432 11
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchh---------------hc
Q 004839 552 KLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN---------------TL 616 (728)
Q Consensus 552 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~---------------~~ 616 (728)
...+++++.+.+..++++- +.+++.++|||+||.+++.++.++|++++++|+.+|...... .+
T Consensus 85 ~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
T 2wue_A 85 HGQFNRYAAMALKGLFDQL--GLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFS 162 (291)
T ss_dssp CSSHHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHh--CCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHh
Confidence 1246777777776666542 236899999999999999999999999999999987542110 00
Q ss_pred cCCCCCCCccccccc-CCC--CC-------------HHHHHHHHc----c-C-----cc--cccccCCCCCeEEEEcCCC
Q 004839 617 LYPILPLIAADYEEF-GYP--GD-------------IDDFHAIRN----Y-S-----PY--DNIQKDVLYPAVLVTSSFN 668 (728)
Q Consensus 617 ~~~~~~~~~~~~~~~-g~p--~~-------------~~~~~~~~~----~-s-----P~--~~i~~~~~~P~lli~g~~D 668 (728)
..............+ ..+ .. ++....+.. + + +. ..+.+ +++|+|+|+|..|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lvi~G~~D 241 (291)
T 2wue_A 163 VAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYR-LRQPVLLIWGRED 241 (291)
T ss_dssp HSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGG-CCSCEEEEEETTC
T ss_pred ccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhh-CCCCeEEEecCCC
Confidence 000000000000000 000 00 011111110 0 0 11 34454 8999999999999
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc-hhhhHHHHHHHHHHHH
Q 004839 669 TRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN-RYLQCKESALETAFLI 723 (728)
Q Consensus 669 ~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~afl~ 723 (728)
..+|+..+.++++.+... .+.+.+++||.... ....+ .....+||.
T Consensus 242 ~~~~~~~~~~~~~~~p~~-------~~~~i~~~gH~~~~e~p~~~--~~~i~~fl~ 288 (291)
T 2wue_A 242 RVNPLDGALVALKTIPRA-------QLHVFGQCGHWVQVEKFDEF--NKLTIEFLG 288 (291)
T ss_dssp SSSCGGGGHHHHHHSTTE-------EEEEESSCCSCHHHHTHHHH--HHHHHHHTT
T ss_pred CCCCHHHHHHHHHHCCCC-------eEEEeCCCCCChhhhCHHHH--HHHHHHHHh
Confidence 999999888887776432 23337899997432 22222 233456764
No 175
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.48 E-value=1.9e-13 Score=141.18 Aligned_cols=122 Identities=11% Similarity=-0.014 Sum_probs=88.5
Q ss_pred ECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCC
Q 004839 473 PSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKK 552 (728)
Q Consensus 473 ~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~ 552 (728)
...||.++.+... ++.|+||++||..+.. ..|......|+++ |.|+.+|+||+|.+...- .....
T Consensus 14 ~~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~--~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~----~~~~~ 78 (302)
T 1mj5_A 14 IEIKGRRMAYIDE--------GTGDPILFQHGNPTSS--YLWRNIMPHCAGL-GRLIACDLIGMGDSDKLD----PSGPE 78 (302)
T ss_dssp EEETTEEEEEEEE--------SCSSEEEEECCTTCCG--GGGTTTGGGGTTS-SEEEEECCTTSTTSCCCS----SCSTT
T ss_pred EEECCEEEEEEEc--------CCCCEEEEECCCCCch--hhhHHHHHHhccC-CeEEEEcCCCCCCCCCCC----CCCcc
Confidence 3458888765432 1248899999976643 3455555666655 899999999999763221 00112
Q ss_pred CCcHHHHHHHHHHHHHcCCCCC-CcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 004839 553 LNSIKDFISCARFLIEKEIVKE-HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLD 611 (728)
Q Consensus 553 ~~~~~D~~~~~~~l~~~~~~d~-~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d 611 (728)
..+++|+.+.+..++++- +. +++.++|+|+||.+++.++.++|++++++|+.+|...
T Consensus 79 ~~~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 136 (302)
T 1mj5_A 79 RYAYAEHRDYLDALWEAL--DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAM 136 (302)
T ss_dssp SSCHHHHHHHHHHHHHHT--TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCS
T ss_pred cccHHHHHHHHHHHHHHh--CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCC
Confidence 247788888777777652 34 7899999999999999999999999999999998764
No 176
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.47 E-value=6.9e-13 Score=135.93 Aligned_cols=104 Identities=23% Similarity=0.245 Sum_probs=81.4
Q ss_pred ccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004839 496 NPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 575 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 575 (728)
.|.||++||.+++. ..|......|+++||.|+.+|.||+|.+... .....+++++.+.+..+++.-. ..+
T Consensus 4 ~~~vvllHG~~~~~--~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~-~~~ 73 (273)
T 1xkl_A 4 GKHFVLVHGACHGG--WSWYKLKPLLEAAGHKVTALDLAASGTDLRK-------IEELRTLYDYTLPLMELMESLS-ADE 73 (273)
T ss_dssp CCEEEEECCTTCCG--GGGTTHHHHHHHTTCEEEECCCTTSTTCCCC-------GGGCCSHHHHHHHHHHHHHTSC-SSS
T ss_pred CCeEEEECCCCCCc--chHHHHHHHHHhCCCEEEEecCCCCCCCccC-------cccccCHHHHHHHHHHHHHHhc-cCC
Confidence 36799999976543 4577788889899999999999999976322 0112467888777777776421 126
Q ss_pred cEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCc
Q 004839 576 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 609 (728)
Q Consensus 576 ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~ 609 (728)
++.++||||||.+++.++.++|++++++|+.++.
T Consensus 74 ~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~ 107 (273)
T 1xkl_A 74 KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAF 107 (273)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CEEEEecCHHHHHHHHHHHhChHhheEEEEEecc
Confidence 8999999999999999999999999999988864
No 177
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.47 E-value=7.6e-13 Score=134.84 Aligned_cols=105 Identities=17% Similarity=0.235 Sum_probs=81.2
Q ss_pred CccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 574 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 574 (728)
..|.||++||..++. ..|......|+++||.|+.+|.||+|.+.... ....+++++.+.+..++++-. ..
T Consensus 9 ~g~~vvllHG~~~~~--~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~-------~~~~~~~~~a~dl~~~l~~l~-~~ 78 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGA--WIWYKLKPLLESAGHKVTAVDLSAAGINPRRL-------DEIHTFRDYSEPLMEVMASIP-PD 78 (264)
T ss_dssp CCCEEEEECCTTCCG--GGGTTHHHHHHHTTCEEEEECCTTSTTCSCCG-------GGCCSHHHHHHHHHHHHHHSC-TT
T ss_pred CCCeEEEECCCcccc--chHHHHHHHHHhCCCEEEEeecCCCCCCCCCc-------ccccCHHHHHHHHHHHHHHhC-CC
Confidence 457899999976533 45777888898999999999999999763221 112467777777666665421 12
Q ss_pred CcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCc
Q 004839 575 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 609 (728)
Q Consensus 575 ~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~ 609 (728)
+++.++||||||.+++.++.++|++++++|+.++.
T Consensus 79 ~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~ 113 (264)
T 2wfl_A 79 EKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAM 113 (264)
T ss_dssp CCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSC
T ss_pred CCeEEEEeChHHHHHHHHHHhChhhhceeEEEeec
Confidence 68999999999999999999999999999988764
No 178
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.46 E-value=8.9e-13 Score=135.62 Aligned_cols=123 Identities=20% Similarity=0.262 Sum_probs=87.9
Q ss_pred EEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccc
Q 004839 469 QYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGR 548 (728)
Q Consensus 469 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~ 548 (728)
...+...||.++++...-+++ +.|.||++||..+.. ..|......|++ ||.|+.+|.||+|.+...
T Consensus 7 ~~~~~~~~g~~l~~~~~g~~~-----~~~~vvllHG~~~~~--~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~------ 72 (285)
T 3bwx_A 7 DRYWTSSDGLRLHFRAYEGDI-----SRPPVLCLPGLTRNA--RDFEDLATRLAG-DWRVLCPEMRGRGDSDYA------ 72 (285)
T ss_dssp EEEEECTTSCEEEEEEECBCT-----TSCCEEEECCTTCCG--GGGHHHHHHHBB-TBCEEEECCTTBTTSCCC------
T ss_pred cCeeecCCCceEEEEEcCCCC-----CCCcEEEECCCCcch--hhHHHHHHHhhc-CCEEEeecCCCCCCCCCC------
Confidence 445777899998876543221 146789999976543 457777777776 999999999999976421
Q ss_pred cCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeC
Q 004839 549 RTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEV 607 (728)
Q Consensus 549 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~ 607 (728)
......+++++.+.+..+++.- ..+++.++||||||.+++.++.++|++++++|+..
T Consensus 73 ~~~~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 129 (285)
T 3bwx_A 73 KDPMTYQPMQYLQDLEALLAQE--GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLND 129 (285)
T ss_dssp SSGGGCSHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEES
T ss_pred CCccccCHHHHHHHHHHHHHhc--CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEec
Confidence 0011235555555555555431 23689999999999999999999999999999864
No 179
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.46 E-value=1.8e-14 Score=159.81 Aligned_cols=221 Identities=16% Similarity=0.096 Sum_probs=135.4
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC-cCcccHHHHHHHHHCC-eEEEEEcCC-CCCCCCCccccccccC
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL-LDKRWRSELKSLLDRG-WVVAFADVR-GGGGGGKKWHHDGRRT 550 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~l~~~G-y~v~~~d~R-G~g~~G~~~~~~~~~~ 550 (728)
+.|. +.+.++.|+.. .++.|+||++|||.... ....+....+.|+++| ++|+.+||| |..+++..-... ...
T Consensus 79 ~edc--L~l~v~~P~~~--~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~-~~~ 153 (489)
T 1qe3_A 79 SEDC--LYVNVFAPDTP--SQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFD-EAY 153 (489)
T ss_dssp CSCC--CEEEEEEECSS--CCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTC-TTS
T ss_pred CCCC--CEEEEEeCCCC--CCCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCcccccc-ccC
Confidence 3444 45556778652 23489999999975211 1111222356777775 999999999 333333210000 112
Q ss_pred CCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhC--CCceeEEEEeCCcccchhhccCCCCCCCc
Q 004839 551 KKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCC--PDLFRAVVLEVPFLDATNTLLYPILPLIA 625 (728)
Q Consensus 551 ~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--p~~f~a~v~~~p~~d~~~~~~~~~~~~~~ 625 (728)
.+...+.|+.++++|+.++. ..|++||+|+|+|+||++++.++... +++|+++|+.+|..++....... ....
T Consensus 154 ~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~--~~~~ 231 (489)
T 1qe3_A 154 SDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAA--STAA 231 (489)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHH--HHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHH--HHHH
Confidence 23346899999999998752 35999999999999999999888742 57999999999977443210000 0000
Q ss_pred ccccccCCCCC-------HHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEE-
Q 004839 626 ADYEEFGYPGD-------IDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL- 697 (728)
Q Consensus 626 ~~~~~~g~p~~-------~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~- 697 (728)
......|-+.+ ....+.+...+++.+... ...|.+++++..|.+|.+.++.+++++++..+ .++++
T Consensus 232 ~~~~~~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~-~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~-----vp~~~g 305 (489)
T 1qe3_A 232 AFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEK-ENIFQLFFQPALDPKTLPEEPEKSIAEGAASG-----IPLLIG 305 (489)
T ss_dssp HHHHHHTCCTTCGGGGGTSCHHHHHHHHHHHHTSTT-CCTTSCSSCCBCBTTTBCSCHHHHHHTTTTTT-----CCEEEE
T ss_pred HHHHHcCCCHHHHHHHHcCCHHHHHHHHHHhhhccc-cccCCccceEeECCeecCcCHHHHHhcCCCCC-----CCEEEe
Confidence 00011232210 001122333333322212 34456778888998999999999999888776 45666
Q ss_pred -EcCCCCCCCc
Q 004839 698 -NLTTDIVEEN 707 (728)
Q Consensus 698 -~~~~gH~~~~ 707 (728)
+.++||.+..
T Consensus 306 ~~~~Eg~~~~~ 316 (489)
T 1qe3_A 306 TTRDEGYLFFT 316 (489)
T ss_dssp EETTGGGGTCC
T ss_pred eecchhHhhcc
Confidence 8899998653
No 180
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.46 E-value=3.6e-13 Score=139.06 Aligned_cols=115 Identities=16% Similarity=0.076 Sum_probs=89.0
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.||.++.+...- ..|+||++||..+.. ..|......|+++ |.|+.+|.||+|.+... ....
T Consensus 17 ~~g~~l~~~~~g--------~~~~vv~lHG~~~~~--~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~--------~~~~ 77 (301)
T 3kda_A 17 VDGVKLHYVKGG--------QGPLVMLVHGFGQTW--YEWHQLMPELAKR-FTVIAPDLPGLGQSEPP--------KTGY 77 (301)
T ss_dssp ETTEEEEEEEEE--------SSSEEEEECCTTCCG--GGGTTTHHHHTTT-SEEEEECCTTSTTCCCC--------SSCS
T ss_pred eCCeEEEEEEcC--------CCCEEEEECCCCcch--hHHHHHHHHHHhc-CeEEEEcCCCCCCCCCC--------CCCc
Confidence 488888765431 347899999987644 4566777888888 99999999999976432 1234
Q ss_pred cHHHHHHHHHHHHHcCCCCCCc-EEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 555 SIKDFISCARFLIEKEIVKEHK-LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
+++|+.+.+..+++.- +.++ +.++|||+||.+++.++.++|++++++|+.+|..
T Consensus 78 ~~~~~~~~l~~~l~~l--~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 132 (301)
T 3kda_A 78 SGEQVAVYLHKLARQF--SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPI 132 (301)
T ss_dssp SHHHHHHHHHHHHHHH--CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCC
T ss_pred cHHHHHHHHHHHHHHc--CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCC
Confidence 6777777777766542 3356 9999999999999999999999999999999863
No 181
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.46 E-value=5.9e-13 Score=135.75 Aligned_cols=104 Identities=17% Similarity=0.239 Sum_probs=80.4
Q ss_pred ccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004839 496 NPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 575 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 575 (728)
.|.||++||..+.. ..|......|+++ |.|+++|.||+|.+... .. ...+++++.+.+..+++. .+.+
T Consensus 16 g~~vvllHG~~~~~--~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~------~~-~~~~~~~~~~dl~~~l~~--l~~~ 83 (269)
T 2xmz_A 16 NQVLVFLHGFLSDS--RTYHNHIEKFTDN-YHVITIDLPGHGEDQSS------MD-ETWNFDYITTLLDRILDK--YKDK 83 (269)
T ss_dssp SEEEEEECCTTCCG--GGGTTTHHHHHTT-SEEEEECCTTSTTCCCC------TT-SCCCHHHHHHHHHHHHGG--GTTS
T ss_pred CCeEEEEcCCCCcH--HHHHHHHHHHhhc-CeEEEecCCCCCCCCCC------CC-CccCHHHHHHHHHHHHHH--cCCC
Confidence 35699999986644 4566667777664 99999999999976321 11 134788888877777765 2346
Q ss_pred cEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 004839 576 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLD 611 (728)
Q Consensus 576 ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d 611 (728)
++.++||||||.+++.++.++|++++++|+.+|...
T Consensus 84 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 119 (269)
T 2xmz_A 84 SITLFGYSMGGRVALYYAINGHIPISNLILESTSPG 119 (269)
T ss_dssp EEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSC
T ss_pred cEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcc
Confidence 899999999999999999999999999999987543
No 182
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.45 E-value=3.3e-13 Score=143.59 Aligned_cols=113 Identities=16% Similarity=0.068 Sum_probs=80.8
Q ss_pred CCccEEEEEcCCCCCCcC---cccH-----------HHHHHHHHCCeEEEEEcCCCCCCCCCcccccccc---CCC-CCc
Q 004839 494 NQNPGLLHGHGAYGELLD---KRWR-----------SELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRR---TKK-LNS 555 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~---~~~~-----------~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~---~~~-~~~ 555 (728)
++.|+||++||+.+.... ..|. ...+.|+++||.|+.+|+||+|.....-.. ... ... ...
T Consensus 48 ~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~~~~ 126 (354)
T 2rau_A 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDR-QLSFTANWGWSTW 126 (354)
T ss_dssp CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGG-GGGGGTTCSHHHH
T ss_pred CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCccccc-ccccccCCcHHHH
Confidence 346899999998665421 0222 567889999999999999999865422110 000 110 123
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC-CCceeEEEEeCCc
Q 004839 556 IKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC-PDLFRAVVLEVPF 609 (728)
Q Consensus 556 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~f~a~v~~~p~ 609 (728)
.+|+.++++++.++ .+.+++.++|+|+||.+++.++.++ |++++++|+.+|.
T Consensus 127 ~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~ 179 (354)
T 2rau_A 127 ISDIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGG 179 (354)
T ss_dssp HHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCS
T ss_pred HHHHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEeccc
Confidence 56777788887654 3457899999999999999999988 9999999998543
No 183
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.44 E-value=4.3e-13 Score=135.76 Aligned_cols=205 Identities=12% Similarity=0.046 Sum_probs=121.1
Q ss_pred ccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004839 496 NPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 575 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 575 (728)
.|.||++||..++. ..|......|+++ |.|+.+|.||+|.+... . ..+++++.+.+..+++.- +.+
T Consensus 16 ~~~vvllHG~~~~~--~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~------~---~~~~~~~a~dl~~~l~~l--~~~ 81 (255)
T 3bf7_A 16 NSPIVLVHGLFGSL--DNLGVLARDLVND-HNIIQVDVRNHGLSPRE------P---VMNYPAMAQDLVDTLDAL--QID 81 (255)
T ss_dssp CCCEEEECCTTCCT--TTTHHHHHHHTTT-SCEEEECCTTSTTSCCC------S---CCCHHHHHHHHHHHHHHH--TCS
T ss_pred CCCEEEEcCCcccH--hHHHHHHHHHHhh-CcEEEecCCCCCCCCCC------C---CcCHHHHHHHHHHHHHHc--CCC
Confidence 47799999976644 4577777777765 99999999999976332 1 235666665555555431 236
Q ss_pred cEEEEEeCccHHHHHHHHHhCCCceeEEEEeCC--cccc----hh---hc---cCCCCCCCcccccc-cC-CCCCHHHHH
Q 004839 576 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVP--FLDA----TN---TL---LYPILPLIAADYEE-FG-YPGDIDDFH 641 (728)
Q Consensus 576 ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p--~~d~----~~---~~---~~~~~~~~~~~~~~-~g-~p~~~~~~~ 641 (728)
++.++|||+||.+++.++.++|++++++|+..+ .... .. .+ ...... ......+ +. ...+.....
T Consensus 82 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 160 (255)
T 3bf7_A 82 KATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQ-TRQQAAAIMRQHLNEEGVIQ 160 (255)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCC-SHHHHHHHHTTTCCCHHHHH
T ss_pred CeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccc-cHHHHHHHHhhhcchhHHHH
Confidence 899999999999999999999999999998643 2110 00 00 000000 0000000 00 000000000
Q ss_pred H--------------------HHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCC
Q 004839 642 A--------------------IRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTT 701 (728)
Q Consensus 642 ~--------------------~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 701 (728)
. +........+.+ +++|+|+|+|+.|..+++..+.++.+.+... .+...+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-------~~~~i~~~ 232 (255)
T 3bf7_A 161 FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPA-WDHPALFIPGGNSPYVSEQYRDDLLAQFPQA-------RAHVIAGA 232 (255)
T ss_dssp HHHTTEETTEESSCHHHHHHTHHHHHCCCCCCC-CCSCEEEECBTTCSTTCGGGHHHHHHHCTTE-------EECCBTTC
T ss_pred HHHHhccCCceeecHHHHHhhhhhccccccccc-cCCCeEEEECCCCCCCCHHHHHHHHHHCCCC-------eEEEeCCC
Confidence 0 000000012334 8899999999999999998888777665431 22227899
Q ss_pred CCCCCc-hhhhHHHHHHHHHHHHHh
Q 004839 702 DIVEEN-RYLQCKESALETAFLIKM 725 (728)
Q Consensus 702 gH~~~~-~~~~~~~~~~~~afl~~~ 725 (728)
||.... ....+ .....+||.+|
T Consensus 233 gH~~~~e~p~~~--~~~i~~fl~~~ 255 (255)
T 3bf7_A 233 GHWVHAEKPDAV--LRAIRRYLNDH 255 (255)
T ss_dssp CSCHHHHCHHHH--HHHHHHHHHTC
T ss_pred CCccccCCHHHH--HHHHHHHHhcC
Confidence 997533 33222 34456888654
No 184
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.44 E-value=1.4e-12 Score=132.34 Aligned_cols=103 Identities=18% Similarity=0.162 Sum_probs=80.8
Q ss_pred cEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004839 497 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 576 (728)
Q Consensus 497 P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 576 (728)
|.||++||...+. ..|......|+++||.|+.+|.||+|.+... .....+++++.+.+..+++.-. ..++
T Consensus 4 ~~vvllHG~~~~~--~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~-~~~~ 73 (257)
T 3c6x_A 4 AHFVLIHTICHGA--WIWHKLKPLLEALGHKVTALDLAASGVDPRQ-------IEEIGSFDEYSEPLLTFLEALP-PGEK 73 (257)
T ss_dssp CEEEEECCTTCCG--GGGTTHHHHHHHTTCEEEEECCTTSTTCSCC-------GGGCCSHHHHTHHHHHHHHTSC-TTCC
T ss_pred CcEEEEcCCccCc--CCHHHHHHHHHhCCCEEEEeCCCCCCCCCCC-------cccccCHHHHHHHHHHHHHhcc-ccCC
Confidence 6799999976433 4577788899999999999999999976321 1112478888877777776421 1258
Q ss_pred EEEEEeCccHHHHHHHHHhCCCceeEEEEeCCc
Q 004839 577 LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 609 (728)
Q Consensus 577 i~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~ 609 (728)
+.++||||||.+++.++.++|++++++|+.++.
T Consensus 74 ~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~ 106 (257)
T 3c6x_A 74 VILVGESCGGLNIAIAADKYCEKIAAAVFHNSV 106 (257)
T ss_dssp EEEEEEETHHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eEEEEECcchHHHHHHHHhCchhhheEEEEecc
Confidence 999999999999999999999999999988764
No 185
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.44 E-value=1.2e-12 Score=124.91 Aligned_cols=169 Identities=14% Similarity=0.034 Sum_probs=117.4
Q ss_pred ccEEEEEcCCCCCCcCcccHHHHHHHHHCCe---EEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCC
Q 004839 496 NPGLLHGHGAYGELLDKRWRSELKSLLDRGW---VVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIV 572 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy---~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 572 (728)
.|+||++||..+.. ..|......|+++|| .|+.+|+||.|.... ...+++.+.++.++++ .
T Consensus 3 ~~~vv~~HG~~~~~--~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~------------~~~~~~~~~~~~~~~~--~ 66 (181)
T 1isp_A 3 HNPVVMVHGIGGAS--FNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY------------NNGPVLSRFVQKVLDE--T 66 (181)
T ss_dssp CCCEEEECCTTCCG--GGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH------------HHHHHHHHHHHHHHHH--H
T ss_pred CCeEEEECCcCCCH--hHHHHHHHHHHHcCCCCccEEEEecCCCCCchh------------hhHHHHHHHHHHHHHH--c
Confidence 47789999976543 567778899999998 599999999885411 2556777777766654 2
Q ss_pred CCCcEEEEEeCccHHHHHHHHHhC--CCceeEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCccc
Q 004839 573 KEHKLAGWGYSAGGLLVAAAINCC--PDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYD 650 (728)
Q Consensus 573 d~~ri~i~G~S~GG~~~~~~~~~~--p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~ 650 (728)
+.+++.++|+|+||.+++.++.++ |++++++|+.+|....... . .+ +.. .+
T Consensus 67 ~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~---~----------~~--~~~----------~~-- 119 (181)
T 1isp_A 67 GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG---K----------AL--PGT----------DP-- 119 (181)
T ss_dssp CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS---B----------CC--CCS----------CT--
T ss_pred CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc---c----------cC--CCC----------CC--
Confidence 457899999999999999999987 8999999999997553211 0 00 100 01
Q ss_pred ccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchhhhHHHHHHHHHHHHHh
Q 004839 651 NIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKM 725 (728)
Q Consensus 651 ~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~afl~~~ 725 (728)
..+.|+|+++|..|..||+..+. + .+ ..+..++++||....... +......+||.+.
T Consensus 120 ----~~~~p~l~i~G~~D~~v~~~~~~-----~--~~-----~~~~~~~~~gH~~~~~~~--~~~~~i~~fl~~~ 176 (181)
T 1isp_A 120 ----NQKILYTSIYSSADMIVMNYLSR-----L--DG-----ARNVQIHGVGHIGLLYSS--QVNSLIKEGLNGG 176 (181)
T ss_dssp ----TCCCEEEEEEETTCSSSCHHHHC-----C--BT-----SEEEEESSCCTGGGGGCH--HHHHHHHHHHTTT
T ss_pred ----ccCCcEEEEecCCCccccccccc-----C--CC-----CcceeeccCchHhhccCH--HHHHHHHHHHhcc
Confidence 13568999999999999987432 1 11 233337899998644222 3345567887653
No 186
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.44 E-value=6.4e-13 Score=135.81 Aligned_cols=211 Identities=12% Similarity=0.061 Sum_probs=125.6
Q ss_pred cEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004839 497 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 576 (728)
Q Consensus 497 P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 576 (728)
|.||++||..+.. ..|......|++ +|.|+.+|+||+|.+...-.. .....+++++.+.+..+++.- +.++
T Consensus 21 ~~vvllHG~~~~~--~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~----~~~~~~~~~~a~dl~~~l~~l--~~~~ 91 (271)
T 1wom_A 21 ASIMFAPGFGCDQ--SVWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYD----LNRYQTLDGYAQDVLDVCEAL--DLKE 91 (271)
T ss_dssp SEEEEECCTTCCG--GGGTTTGGGGTT-TSEEEECCCSCCSSSCCTTCC----TTGGGSHHHHHHHHHHHHHHT--TCSC
T ss_pred CcEEEEcCCCCch--hhHHHHHHHHHh-cCeEEEECCCCCCCCCCCccc----ccccccHHHHHHHHHHHHHHc--CCCC
Confidence 7899999965533 345555666655 799999999999976432100 011135666666666666532 3468
Q ss_pred EEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcccchhhc--cCCCCCC-------------Cccccc-----ccCCCCC
Q 004839 577 LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL--LYPILPL-------------IAADYE-----EFGYPGD 636 (728)
Q Consensus 577 i~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d~~~~~--~~~~~~~-------------~~~~~~-----~~g~p~~ 636 (728)
+.++||||||.+++.++.++|++++++|+.+|........ ....+.. ...+.. ..+.+..
T Consensus 92 ~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (271)
T 1wom_A 92 TVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDR 171 (271)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTTC
T ss_pred eEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999999988742111000 0000000 000000 0122211
Q ss_pred HHHHHH----HHc---------------cCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEE
Q 004839 637 IDDFHA----IRN---------------YSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL 697 (728)
Q Consensus 637 ~~~~~~----~~~---------------~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~ 697 (728)
++..+. +.. ......+.+ ++.|+|+|+|+.|..+|+..+.++.+.+... .+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~-------~~~~ 243 (271)
T 1wom_A 172 PEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSK-VTVPSLILQCADDIIAPATVGKYMHQHLPYS-------SLKQ 243 (271)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTT-CCSCEEEEEEETCSSSCHHHHHHHHHHSSSE-------EEEE
T ss_pred hHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccc-cCCCEEEEEcCCCCcCCHHHHHHHHHHCCCC-------EEEE
Confidence 111111 111 111123344 8999999999999999998888887766431 2333
Q ss_pred EcCCCCCCCc-hhhhHHHHHHHHHHHHHhh
Q 004839 698 NLTTDIVEEN-RYLQCKESALETAFLIKMM 726 (728)
Q Consensus 698 ~~~~gH~~~~-~~~~~~~~~~~~afl~~~l 726 (728)
.+++||.... ....+ .....+||.+++
T Consensus 244 i~~~gH~~~~e~p~~~--~~~i~~fl~~~~ 271 (271)
T 1wom_A 244 MEARGHCPHMSHPDET--IQLIGDYLKAHV 271 (271)
T ss_dssp EEEESSCHHHHCHHHH--HHHHHHHHHHHC
T ss_pred eCCCCcCccccCHHHH--HHHHHHHHHhcC
Confidence 6889997532 22222 344568887763
No 187
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.43 E-value=1.5e-12 Score=131.91 Aligned_cols=208 Identities=15% Similarity=0.064 Sum_probs=125.3
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCC
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 573 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 573 (728)
.+.|+||++||..+. ...|......|++ +|.|+.+|+||+|.+.. .....+++++.+.+..++++- +
T Consensus 18 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~--------~~~~~~~~~~~~~~~~~l~~~--~ 84 (267)
T 3fla_A 18 DARARLVCLPHAGGS--ASFFFPLAKALAP-AVEVLAVQYPGRQDRRH--------EPPVDSIGGLTNRLLEVLRPF--G 84 (267)
T ss_dssp TCSEEEEEECCTTCC--GGGGHHHHHHHTT-TEEEEEECCTTSGGGTT--------SCCCCSHHHHHHHHHHHTGGG--T
T ss_pred CCCceEEEeCCCCCC--chhHHHHHHHhcc-CcEEEEecCCCCCCCCC--------CCCCcCHHHHHHHHHHHHHhc--C
Confidence 456899999998653 3566777777765 49999999999986422 112346777777777666543 4
Q ss_pred CCcEEEEEeCccHHHHHHHHHhCCCc----eeEEEEeCCcccchhhccCCCCCCCccc----ccccC-CCC----CH---
Q 004839 574 EHKLAGWGYSAGGLLVAAAINCCPDL----FRAVVLEVPFLDATNTLLYPILPLIAAD----YEEFG-YPG----DI--- 637 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~~~p~~----f~a~v~~~p~~d~~~~~~~~~~~~~~~~----~~~~g-~p~----~~--- 637 (728)
.+++.++|+|+||.+++.++.++|++ ++++|+..+........ .......... ...++ .+. +.
T Consensus 85 ~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (267)
T 3fla_A 85 DRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRD-DDVRGASDERLVAELRKLGGSDAAMLADPELL 163 (267)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCC-SCTTCCCHHHHHHHHHHTCHHHHHHHHSHHHH
T ss_pred CCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccc-hhhcccchHHHHHHHHHhcCcchhhccCHHHH
Confidence 57899999999999999999999986 88888887654322110 0000000000 00000 000 00
Q ss_pred --------HHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCchh
Q 004839 638 --------DDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRY 709 (728)
Q Consensus 638 --------~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~ 709 (728)
..+..+..+.+... . .++.|+|+++|+.|..||+..+.++.+.+.. . ..+..+++ ||.... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~-----~~~~~~~g-gH~~~~-~ 233 (267)
T 3fla_A 164 AMVLPAIRSDYRAVETYRHEPG-R-RVDCPVTVFTGDHDPRVSVGEARAWEEHTTG-P-----ADLRVLPG-GHFFLV-D 233 (267)
T ss_dssp HHHHHHHHHHHHHHHHCCCCTT-C-CBSSCEEEEEETTCTTCCHHHHHGGGGGBSS-C-----EEEEEESS-STTHHH-H
T ss_pred HHHHHHHHHHHHhhhccccccc-C-cCCCCEEEEecCCCCCCCHHHHHHHHHhcCC-C-----ceEEEecC-Cceeec-c
Confidence 11122223333222 3 3789999999999999999888887666543 1 22333677 997532 1
Q ss_pred hhHHHHHHHHHHHHHh
Q 004839 710 LQCKESALETAFLIKM 725 (728)
Q Consensus 710 ~~~~~~~~~~afl~~~ 725 (728)
..-.......+||.+.
T Consensus 234 ~~~~~~~~i~~fl~~~ 249 (267)
T 3fla_A 234 QAAPMIATMTEKLAGP 249 (267)
T ss_dssp THHHHHHHHHHHTC--
T ss_pred CHHHHHHHHHHHhccc
Confidence 2222233456776543
No 188
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.43 E-value=1.9e-11 Score=143.48 Aligned_cols=253 Identities=11% Similarity=0.035 Sum_probs=152.4
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCC---ceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSG---ALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg---~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.+..++|||||++|+|... .+|+++|++++ +...++. ......+.|||||+.|+|+.. .+||++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~------~~i~~~ 177 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG------RNLWVI 177 (741)
T ss_dssp ESCCCEECTTSSEEEEEET------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET------TEEEEE
T ss_pred CcceeEECCCCCEEEEEeC------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC------CcEEEE
Confidence 4678899999999999864 35999999999 6665554 346788999999999999852 279999
Q ss_pred ECCCCCceeEEeeecCcc--------------eEEEEEEcCCCCEEEEEEcCC---------------------------
Q 004839 201 IIGSTDEDALLLEESNEN--------------VYVNIRHTKDFHFVCVHTFST--------------------------- 239 (728)
Q Consensus 201 ~l~t~~~~~lv~~~~~~~--------------~~~~~~~SpDg~~l~~~~~~~--------------------------- 239 (728)
++.++....+........ ....+.|||||++|++.+...
T Consensus 178 d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g 257 (741)
T 2ecf_A 178 DLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAG 257 (741)
T ss_dssp ETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTT
T ss_pred ecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCC
Confidence 998764322222111100 013478999999999886543
Q ss_pred ---CceEEEEEeCCC-CCCCeEEeeec--CCc--eEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeE
Q 004839 240 ---TSSKVFLINAAD-PFSGLTLIWEC--EGL--AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWES 311 (728)
Q Consensus 240 ---~~~~l~~~dl~~-~~~~~~~l~~~--~~~--~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 311 (728)
....||++|+++ +. .+.+... ... ....+ +||+.|++....... .+..|+.++++ . +....
T Consensus 258 ~~~~~~~l~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~----~~~~i~~~d~~-~---g~~~~ 326 (741)
T 2ecf_A 258 DANVQVKLGVISPAEQAQ--TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ----KKLDLVEVTLA-S---NQQRV 326 (741)
T ss_dssp SCCCEEEEEEECSSTTCC--CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS----SEEEEEEEETT-T---CCEEE
T ss_pred CCCCeeEEEEEECCCCCc--eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC----CeEEEEEEECC-C---CceEE
Confidence 123899999976 53 3333322 111 23456 999999887652221 14678888876 2 33444
Q ss_pred EeecCCCc---eEEEEEeeC-CEEEEEEecCCeeEEEEEecCCCCCCcceeecccccccccC-CCceeeeecCCCccCCC
Q 004839 312 VFIDDQGL---VVEDVDFCK-THMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPL-PKYVSQIVPGPNYDYYS 386 (728)
Q Consensus 312 li~~~~~~---~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~-p~~~~~i~~~~~~~~~~ 386 (728)
++...... .+..+.+.. +.+++....+|..+|+.++++++ .. .+.- ...+.++. .++.++
T Consensus 327 ~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~----~~--------~l~~~~~~v~~~~---~~s~dg 391 (741)
T 2ecf_A 327 LAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK----AA--------ALTHGNWSVDELL---AVDEKA 391 (741)
T ss_dssp EEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC----EE--------ESCCSSSCEEEEE---EEETTT
T ss_pred EEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC----ee--------eeeecceEEEeEe---EEeCCC
Confidence 44332111 122334432 34777777788888999886421 11 1111 11122221 245677
Q ss_pred cEEEEEEccCCC--CceEEEEECCCCeEEEEE
Q 004839 387 STMRFAISSPVM--PDAVVDYDLSYGKWNIIQ 416 (728)
Q Consensus 387 ~~~~~~~ss~~~--p~~~~~~~~~~~~~~~l~ 416 (728)
+.+++..+. .. -..+|.++...+..+.|+
T Consensus 392 ~~l~~~~~~-~~~~~~~l~~~~~~g~~~~~l~ 422 (741)
T 2ecf_A 392 GLAYFRAGI-ESARESQIYAVPLQGGQPQRLS 422 (741)
T ss_dssp TEEEEEECS-SCTTCBEEEEEETTCCCCEECC
T ss_pred CEEEEEEeC-CCCceEEEEEEEcCCCCeeecc
Confidence 777766543 33 346788776555444443
No 189
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.43 E-value=2.8e-12 Score=134.42 Aligned_cols=114 Identities=19% Similarity=0.126 Sum_probs=85.6
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCc
Q 004839 476 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNS 555 (728)
Q Consensus 476 dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~ 555 (728)
+|.++.+... + .++.|.||++||.+++. ..|......|++ +|.|+++|.||+|.+... ....+
T Consensus 15 ~g~~l~y~~~---G---~g~~~pvvllHG~~~~~--~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~--------~~~~~ 77 (316)
T 3afi_E 15 LGSSMAYRET---G---AQDAPVVLFLHGNPTSS--HIWRNILPLVSP-VAHCIAPDLIGFGQSGKP--------DIAYR 77 (316)
T ss_dssp TTEEEEEEEE---S---CTTSCEEEEECCTTCCG--GGGTTTHHHHTT-TSEEEEECCTTSTTSCCC--------SSCCC
T ss_pred CCEEEEEEEe---C---CCCCCeEEEECCCCCch--HHHHHHHHHHhh-CCEEEEECCCCCCCCCCC--------CCCCC
Confidence 6777765432 1 12234899999987644 456667777765 499999999999976421 12357
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCC
Q 004839 556 IKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVP 608 (728)
Q Consensus 556 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p 608 (728)
++++.+.+..++++- +-+++.++|+|+||.+++.++.++|++++++|+..+
T Consensus 78 ~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 128 (316)
T 3afi_E 78 FFDHVRYLDAFIEQR--GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEF 128 (316)
T ss_dssp HHHHHHHHHHHHHHT--TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHc--CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeecc
Confidence 888888777777653 236899999999999999999999999999998875
No 190
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.42 E-value=6.3e-12 Score=132.88 Aligned_cols=127 Identities=15% Similarity=0.156 Sum_probs=86.3
Q ss_pred ceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCc-CcccHHHHHHHHHCCeEEEEEc----CCCCCCC
Q 004839 465 YSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELL-DKRWRSELKSLLDRGWVVAFAD----VRGGGGG 539 (728)
Q Consensus 465 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~-~~~~~~~~~~l~~~Gy~v~~~d----~RG~g~~ 539 (728)
...+.+.+.. | ..+.+..+-|. ++..|+||++||..++.. ...|......| ++||.|+.+| +||+|.+
T Consensus 13 ~~g~~~~~~~-~-~~~~y~~~g~~----~~~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S 85 (335)
T 2q0x_A 13 VQGHLFTYYK-D-PYCKIPVFMMN----MDARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQ 85 (335)
T ss_dssp EEEEEEEEEE-E-TTEEEEEEEEC----TTSSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSC
T ss_pred cceEEEecCC-C-CceeEEEeccC----CCCCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCc
Confidence 3334444444 3 45555444321 123478899999544322 12244556666 7899999995 5888764
Q ss_pred CCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHH--hCCCceeEEEEeCCccc
Q 004839 540 GKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAIN--CCPDLFRAVVLEVPFLD 611 (728)
Q Consensus 540 G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~--~~p~~f~a~v~~~p~~d 611 (728)
.. ....+|+.+.++++.++ .+.+++.++||||||.+++.++. .+|++++++|+.+|+.+
T Consensus 86 ~~-----------~~~~~d~~~~~~~l~~~--l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 86 DH-----------AHDAEDVDDLIGILLRD--HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCD 146 (335)
T ss_dssp CH-----------HHHHHHHHHHHHHHHHH--SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCC
T ss_pred cc-----------cCcHHHHHHHHHHHHHH--cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCccc
Confidence 21 12467888888888764 34578999999999999999988 57999999999888654
No 191
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.40 E-value=3.3e-11 Score=129.44 Aligned_cols=216 Identities=8% Similarity=-0.009 Sum_probs=132.4
Q ss_pred eceeeCCCCCEEEEEEEcC-----------------CCcEEEEEEEECCCCceeccCc-cceeeeEEEec-CCCEEEEEE
Q 004839 127 ELSEVSPDHKFLAYTMYDK-----------------DNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAK-DGQALIYVV 187 (728)
Q Consensus 127 ~~~~~SPDG~~lA~~~~~~-----------------g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~Wsp-Dg~~l~y~~ 187 (728)
..+.+||||++|+...... .+...+|+++|+++|+...++. ...+..+.||| ||+.|+|+.
T Consensus 128 ~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~ 207 (388)
T 3pe7_A 128 GTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCH 207 (388)
T ss_dssp EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred cceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEE
Confidence 3445699999998654211 1223789999999998776654 34567899999 999999987
Q ss_pred ecCC-CCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCce--EEEEEeCCCCCCCeEEeeecCC
Q 004839 188 TDQN-KRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSS--KVFLINAADPFSGLTLIWECEG 264 (728)
Q Consensus 188 ~~~~-~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~--~l~~~dl~~~~~~~~~l~~~~~ 264 (728)
.... ....+||.+++.++.... +...........+.|||||+.|++.+...... .||++|+++ ++.+.+.....
T Consensus 208 ~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~--g~~~~l~~~~~ 284 (388)
T 3pe7_A 208 EGPHDLVDARMWLINEDGTNMRK-VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET--LENRQLTSMPA 284 (388)
T ss_dssp CSCTTTSSCSEEEEETTSCCCEE-SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT--CCEEEEEEECC
T ss_pred ecCCCCCcceEEEEeCCCCceEE-eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCC--CceEEEEcCCC
Confidence 5321 124589999987654322 33322222345688999999998887755443 599999988 45555543322
Q ss_pred c-------eEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCc---------eEE--EEEe
Q 004839 265 L-------AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGL---------VVE--DVDF 326 (728)
Q Consensus 265 ~-------~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~---------~i~--~~~~ 326 (728)
. ....+++||+.|++.....+......+..|+.++++ . +..+.+..+.... ... .+..
T Consensus 285 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~-~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sp 360 (388)
T 3pe7_A 285 CSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK-N---GTQHRVARHDTSWKVFEGDRQVTHPHPSFTP 360 (388)
T ss_dssp EEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT-T---TEEEEEEECCCCCCCBTTBSSTTCCCCEECT
T ss_pred ceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc-C---CceEEeccccCcccccccccccCCCCccCCC
Confidence 1 011467899988876543110000113568888876 2 3334443332100 122 3444
Q ss_pred eCCEEEEEEecCCeeEEEEEecC
Q 004839 327 CKTHMALILREGRTYRLCSVSLP 349 (728)
Q Consensus 327 ~~~~lv~~~~~~g~~~l~~~~l~ 349 (728)
.++.|++....+|.++|++++++
T Consensus 361 Dg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 361 DDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp TSSEEEEEECTTSSCEEEEEECC
T ss_pred CCCEEEEEecCCCceeEEEEECC
Confidence 46789998888999999999875
No 192
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.39 E-value=4.9e-13 Score=140.41 Aligned_cols=227 Identities=12% Similarity=-0.009 Sum_probs=136.5
Q ss_pred CCceEEEEEEECC-CCcEEEEEEEEcCCCCC-CCCccEEEEEcCCCCCCcCcccHHHHHHHHH------CCeEEEEEcCC
Q 004839 463 EFYSCEQYDVPSH-DGISVPLTIIYSPKYKK-ENQNPGLLHGHGAYGELLDKRWRSELKSLLD------RGWVVAFADVR 534 (728)
Q Consensus 463 ~~~~~~~~~~~s~-dG~~i~~~l~~p~~~~~-~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~------~Gy~v~~~d~R 534 (728)
.....+.+++.|. -|.+..++++.|++..+ ++++|+|++.||... . .........+.. .+++|+.++..
T Consensus 8 ~~~~v~~~~~~S~~l~~~r~~~VylP~~y~~~~~~yPVlylldG~~~--f-~~~~~~~~~l~~~~~~~~~~~IvV~i~~~ 84 (331)
T 3gff_A 8 TAVEYQSKRLESRLLKETREYVIALPEGYAQSLEAYPVVYLLDGEDQ--F-DHMASLLQFLSQGTMPQIPKVIIVGIHNT 84 (331)
T ss_dssp ---CEEEEEEEETTTTEEEEEEEECCTTGGGSCCCEEEEEESSHHHH--H-HHHHHHHHHHTCSSSCSSCCCEEEEECCS
T ss_pred CCceEEEEEEEecCCCCeEEEEEEeCCCCCCCCCCccEEEEecChhh--h-HHHHHHHHHHHhhhhcCCCCEEEEEECCC
Confidence 3445677777776 47889999999998765 678999999999421 0 011122344433 36888888752
Q ss_pred CCC-CCCCcccc----cc-------ccCCCCCcHHHHH--HHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCce
Q 004839 535 GGG-GGGKKWHH----DG-------RRTKKLNSIKDFI--SCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLF 600 (728)
Q Consensus 535 G~g-~~G~~~~~----~~-------~~~~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f 600 (728)
... +|. .|.. .+ ....+...+.+++ +.+.++.++-.+++.| +|+|+||||+++++++.++|++|
T Consensus 85 ~R~~dyt-p~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~~F 162 (331)
T 3gff_A 85 NRMRDYT-PTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRPLF 162 (331)
T ss_dssp SHHHHSC-SSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCSSC
T ss_pred CcccccC-CCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCchhh
Confidence 100 010 0000 00 0011223455554 3455555555567655 89999999999999999999999
Q ss_pred eEEEEeCCcccchhhccCCCCCCCcccccccCCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCC-------CCCH
Q 004839 601 RAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNT-------RFGV 673 (728)
Q Consensus 601 ~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~-------~Vp~ 673 (728)
+++++.+|.+.+. .+ ...+.+.+ .+..... ...|+++.+|+.|. +++.
T Consensus 163 ~~~~~~S~~~w~~-------------------~~---~~~~~~~~--~~~~~~~-~~~~l~l~~G~~d~~~~~~~~~~~~ 217 (331)
T 3gff_A 163 SAYLALDTSLWFD-------------------SP---HYLTLLEE--RVVKGDF-KQKQLFMAIANNPLSPGFGVSSYHK 217 (331)
T ss_dssp SEEEEESCCTTTT-------------------TT---HHHHHHHH--HHHHCCC-SSEEEEEEECCCSEETTTEECCHHH
T ss_pred heeeEeCchhcCC-------------------hH---HHHHHHHH--HhhcccC-CCCeEEEEeCCCCCCCccchHHHHH
Confidence 9999999964321 11 01111111 0111111 35678999999986 6888
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEE--EcCCCCCCCchhhhHHHHHHHHHHHHHh
Q 004839 674 WEAAKWVARVRESTIYDPKRPILL--NLTTDIVEENRYLQCKESALETAFLIKM 725 (728)
Q Consensus 674 ~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~afl~~~ 725 (728)
.++.+++++|+..+.. ...+.+ +++++|+.... ......+.||...
T Consensus 218 ~~~~~l~~~Lk~~~~~--g~~~~~~~~pg~~H~sv~~----~~~~~~l~~lf~~ 265 (331)
T 3gff_A 218 DLNLAFADKLTKLAPK--GLGFMAKYYPEETHQSVSH----IGLYDGIRHLFKD 265 (331)
T ss_dssp HHHHHHHHHHHHHCCT--TEEEEEEECTTCCTTTHHH----HHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHhccCC--CceEEEEECCCCCccccHH----HHHHHHHHHHHhh
Confidence 9999999999987421 124444 88999975332 2234455666543
No 193
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.39 E-value=1.1e-11 Score=128.29 Aligned_cols=117 Identities=16% Similarity=0.064 Sum_probs=88.3
Q ss_pred cEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcC--------CCCCCCCCccccc-c-
Q 004839 478 ISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADV--------RGGGGGGKKWHHD-G- 547 (728)
Q Consensus 478 ~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~--------RG~g~~G~~~~~~-~- 547 (728)
..+++.|++|.+. .++.|+||.+||+.. .+.+||+|+.+|+ ||+.++|. |++. +
T Consensus 90 ~~~~~~i~lP~~~--~~p~Pvii~i~~~~~-------------~~~~G~a~~~~~~~~v~~~~~~gs~g~g~-f~~ly~~ 153 (375)
T 3pic_A 90 ISFTVTITYPSSG--TAPYPAIIGYGGGSL-------------PAPAGVAMINFNNDNIAAQVNTGSRGQGK-FYDLYGS 153 (375)
T ss_dssp EEEEEEEECCSSS--CSSEEEEEEETTCSS-------------CCCTTCEEEEECHHHHSCCSSGGGTTCSH-HHHHHCT
T ss_pred eEEEEEEECCCCC--CCCccEEEEECCCcc-------------ccCCCeEEEEecccccccccCCCCcccee-cccccCC
Confidence 3467778888753 377899999998521 1468999999997 66666665 4422 1
Q ss_pred ccCCCCCcH--HHHHHHHHHHHHcC--CCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 004839 548 RRTKKLNSI--KDFISCARFLIEKE--IVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLD 611 (728)
Q Consensus 548 ~~~~~~~~~--~D~~~~~~~l~~~~--~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d 611 (728)
...++.... =|+..+++||..++ .+|++||+|+|+|+||.+++++++.. ++|+++|+.++..+
T Consensus 154 ~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~~ 220 (375)
T 3pic_A 154 SHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGAG 220 (375)
T ss_dssp TCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCTT
T ss_pred ccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCCC
Confidence 122332222 37888999999998 99999999999999999999999975 58999999987654
No 194
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.38 E-value=8.5e-11 Score=137.44 Aligned_cols=258 Identities=15% Similarity=0.119 Sum_probs=163.0
Q ss_pred CCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccC------cc--ceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 132 SPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP------QA--VRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 132 SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~------~~--~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
+|||++++|.....+.....||+++..+|+...+. .. .....+.|||||+.|+|+.........+|++.|+.
T Consensus 80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~ 159 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD 159 (710)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT
T ss_pred EEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC
Confidence 59999999998877776678999998877654321 11 14678999999999999987665555689999998
Q ss_pred CCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCC-------------ceEEEEEeCCCCCCCeEEeeecC--C--ce
Q 004839 204 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT-------------SSKVFLINAADPFSGLTLIWECE--G--LA 266 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-------------~~~l~~~dl~~~~~~~~~l~~~~--~--~~ 266 (728)
+++.......... +.++.|||||+.|++.+.... ..+||+.++.++..+.+.+.... . ..
T Consensus 160 tg~~~~~~~~~~~---~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~ 236 (710)
T 2xdw_A 160 GAKELPDVLERVK---FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMG 236 (710)
T ss_dssp TTEEEEEEEEEEC---SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred CCCCCcccccCcc---cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEE
Confidence 8753222222221 234789999999999987654 35799999987433334444332 1 13
Q ss_pred EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCC-----CCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCC-e
Q 004839 267 HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASF-----PSRTWESVFIDDQGLVVEDVDFCKTHMALILREGR-T 340 (728)
Q Consensus 267 ~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g-~ 340 (728)
...+++||+.|++.++..... +..|+.++++ .. ....++.+..... .....+...++.+++....++ .
T Consensus 237 ~~~~SpDg~~l~~~~~~~~~~----~~~l~~~d~~-~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~ 310 (710)
T 2xdw_A 237 GAELSDDGRYVLLSIREGCDP----VNRLWYCDLQ-QESNGITGILKWVKLIDNFE-GEYDYVTNEGTVFTFKTNRHSPN 310 (710)
T ss_dssp EEEECTTSCEEEEEEECSSSS----CCEEEEEEGG-GSSSSSCSSCCCEEEECSSS-SCEEEEEEETTEEEEEECTTCTT
T ss_pred EEEEcCCCCEEEEEEEccCCC----ccEEEEEECc-ccccccCCccceEEeeCCCC-cEEEEEeccCCEEEEEECCCCCC
Confidence 456789999999988754211 3568888775 20 1125676655433 233446667889998887655 5
Q ss_pred eEEEEEecCCCCCCcceeecccccccccC-CC-ceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCe
Q 004839 341 YRLCSVSLPLPAGKGVVHLKELHPHFLPL-PK-YVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGK 411 (728)
Q Consensus 341 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~-p~-~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~ 411 (728)
.+|+++++.++... .+. ..++- +. .+.++ .+. +++.+++.+.... -..|+.+|+.+|+
T Consensus 311 ~~l~~~d~~~~~~~---~~~----~l~~~~~~~~~~~~----~~~-~~~~lv~~~~~~g-~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 311 YRLINIDFTDPEES---KWK----VLVPEHEKDVLEWV----ACV-RSNFLVLCYLHDV-KNTLQLHDLATGA 370 (710)
T ss_dssp CEEEEEETTSCCGG---GCE----EEECCCSSCEEEEE----EEE-TTTEEEEEEEETT-EEEEEEEETTTCC
T ss_pred CEEEEEeCCCCCcc---cce----eccCCCCCCeEEEE----EEE-cCCEEEEEEEECC-EEEEEEEECCCCC
Confidence 68999998653200 010 01111 11 11111 122 3566766665433 3578889986665
No 195
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.38 E-value=1.4e-12 Score=131.94 Aligned_cols=95 Identities=22% Similarity=0.243 Sum_probs=72.0
Q ss_pred c-EEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004839 497 P-GLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 575 (728)
Q Consensus 497 P-~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 575 (728)
| .||++||..+.. ..|......|+ .+|.|+.+|.||+|.+... ...+++++.+ .+++ ..+ +
T Consensus 13 ~~~vvllHG~~~~~--~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~---------~~~~~~~~~~---~l~~--~l~-~ 74 (258)
T 1m33_A 13 NVHLVLLHGWGLNA--EVWRCIDEELS-SHFTLHLVDLPGFGRSRGF---------GALSLADMAE---AVLQ--QAP-D 74 (258)
T ss_dssp SSEEEEECCTTCCG--GGGGGTHHHHH-TTSEEEEECCTTSTTCCSC---------CCCCHHHHHH---HHHT--TSC-S
T ss_pred CCeEEEECCCCCCh--HHHHHHHHHhh-cCcEEEEeeCCCCCCCCCC---------CCcCHHHHHH---HHHH--HhC-C
Confidence 5 789999975543 45666666665 5899999999999976432 1235666543 4443 234 7
Q ss_pred cEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCc
Q 004839 576 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 609 (728)
Q Consensus 576 ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~ 609 (728)
++.++|||+||.+++.++.++|++++++|+..+.
T Consensus 75 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 108 (258)
T 1m33_A 75 KAIWLGWSLGGLVASQIALTHPERVRALVTVASS 108 (258)
T ss_dssp SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CeEEEEECHHHHHHHHHHHHhhHhhceEEEECCC
Confidence 8999999999999999999999999999987764
No 196
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.38 E-value=2.4e-12 Score=133.62 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=82.4
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHHC--CeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCC
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLDR--GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEI 571 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~--Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 571 (728)
+..|.||++||..+.. ..|......|+++ ||.|+.+|+||+|.+.... ...++|+.+.+..+++..
T Consensus 34 ~~~~~vvllHG~~~~~--~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~---------~~~~~~~~~~l~~~~~~~- 101 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSS--YSFRHLLEYINETHPGTVVTVLDLFDGRESLRPL---------WEQVQGFREAVVPIMAKA- 101 (302)
T ss_dssp -CCCCEEEECCTTCCG--GGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH---------HHHHHHHHHHHHHHHHHC-
T ss_pred CCCCeEEEECCCCCCh--hHHHHHHHHHHhcCCCcEEEEeccCCCccchhhH---------HHHHHHHHHHHHHHhhcC-
Confidence 4457889999976543 4588888999998 9999999999997542211 136777777787777654
Q ss_pred CCCCcEEEEEeCccHHHHHHHHHhCCC-ceeEEEEeCCccc
Q 004839 572 VKEHKLAGWGYSAGGLLVAAAINCCPD-LFRAVVLEVPFLD 611 (728)
Q Consensus 572 ~d~~ri~i~G~S~GG~~~~~~~~~~p~-~f~a~v~~~p~~d 611 (728)
.+++.++|||+||.+++.++.++|+ +++++|+.+|...
T Consensus 102 --~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 140 (302)
T 1pja_A 102 --PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQM 140 (302)
T ss_dssp --TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred --CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcc
Confidence 4789999999999999999999999 7999999887553
No 197
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.38 E-value=2.9e-11 Score=125.11 Aligned_cols=118 Identities=18% Similarity=0.162 Sum_probs=87.5
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.+|.++++... +..|.||++||.+++. ..|...+..|+++ |.|+++|.||+|.+... . .......
T Consensus 16 ~~g~~l~y~~~--------G~g~~lvllHG~~~~~--~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-~---~~~~~~~ 80 (294)
T 1ehy_A 16 LPDVKIHYVRE--------GAGPTLLLLHGWPGFW--WEWSKVIGPLAEH-YDVIVPDLRGFGDSEKP-D---LNDLSKY 80 (294)
T ss_dssp CSSCEEEEEEE--------ECSSEEEEECCSSCCG--GGGHHHHHHHHTT-SEEEEECCTTSTTSCCC-C---TTCGGGG
T ss_pred ECCEEEEEEEc--------CCCCEEEEECCCCcch--hhHHHHHHHHhhc-CEEEecCCCCCCCCCCC-c---cccccCc
Confidence 57888776432 1236799999987644 5677778888776 99999999999976432 0 0000123
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCc
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 609 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~ 609 (728)
+++++.+.+..++++- .-+++.++|||+||.+++.++.++|++++++|+..+.
T Consensus 81 ~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~ 133 (294)
T 1ehy_A 81 SLDKAADDQAALLDAL--GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPI 133 (294)
T ss_dssp CHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCS
T ss_pred CHHHHHHHHHHHHHHc--CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCC
Confidence 6777777777777652 2368999999999999999999999999999998863
No 198
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.38 E-value=2.6e-11 Score=142.52 Aligned_cols=211 Identities=13% Similarity=0.051 Sum_probs=136.8
Q ss_pred ceeeCCCCCEEEEEEEcCC-------------------------------CcEEEEEEEECCC---C---ceeccCc---
Q 004839 128 LSEVSPDHKFLAYTMYDKD-------------------------------NDYFTLSVRNLNS---G---ALCSKPQ--- 167 (728)
Q Consensus 128 ~~~~SPDG~~lA~~~~~~g-------------------------------~e~~~l~v~dl~t---g---~~~~~~~--- 167 (728)
.+.|||||++|||.....+ +...+|+++|+++ | +...+..
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 4789999999999864322 2235799999999 8 4444432
Q ss_pred ----cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCC-------ceeEEeeecCcceE-----EEEEEcCCCCE
Q 004839 168 ----AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD-------EDALLLEESNENVY-----VNIRHTKDFHF 231 (728)
Q Consensus 168 ----~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~-------~~~lv~~~~~~~~~-----~~~~~SpDg~~ 231 (728)
...+..+.|||||+.+++.... ......|++.|+.+++ ... +.++....+. ..+.|||||+.
T Consensus 255 ~~~~~~~~~~~~wspdg~~~~~~~~r-~~~~~~i~~~d~~tg~~~~~~~~~~~-l~~~~~~~~v~~~~~~~p~fspDG~~ 332 (740)
T 4a5s_A 255 MLIGDHYLCDVTWATQERISLQWLRR-IQNYSVMDICDYDESSGRWNCLVARQ-HIEMSTTGWVGRFRPSEPHFTLDGNS 332 (740)
T ss_dssp HHTSCEEEEEEEEEETTEEEEEEEES-STTEEEEEEEEEETTTTEEEECGGGC-EEEECSSSCSSSSSCCCCEECTTSSE
T ss_pred CCCCCeEEEEEEEeCCCeEEEEEeCC-CCCEEEEEEEECCCCccccceeEEEE-eeeccCCceEccCcCCCceEcCCCCE
Confidence 2245678999999977776543 3345579999998765 222 2223222221 24789999999
Q ss_pred EE-EEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCCEEEEEEcC--CccCCCCCceEEEEeeCCCCCCCCC
Q 004839 232 VC-VHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDA--AKEGQEADNHYLLRCPVDASFPSRT 308 (728)
Q Consensus 232 l~-~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~tn~--~~~~~~~~~~~l~~~~~~~~~~~~~ 308 (728)
|+ +.+...+..+||++|+++ +..+.|+.....+...+..|++.+||.++. +.. .+..|++++++ . ..
T Consensus 333 l~~~~s~~~G~~~l~~~~~~~--~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~----~~~~ly~v~~~-g---~~ 402 (740)
T 4a5s_A 333 FYKIISNEEGYRHICYFQIDK--KDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMP----GGRNLYKIQLI-D---YT 402 (740)
T ss_dssp EEEEEECTTSCEEEEEEETTC--SSCEESCCSSSCEEEEEEECSSEEEEEESCGGGCT----TCBEEEEEETT-E---EE
T ss_pred EEEEEEcCCCceEEEEEECCC--CceEecccCCEEEEEEEEEeCCEEEEEEecCCCCC----ceeEEEEEECC-C---CC
Confidence 88 666666779999999987 567788876555554455679999999987 322 25789999876 2 11
Q ss_pred CeEEeecC---CCceEEEEEee--CCEEEEEEecCCeeEEEEEecCC
Q 004839 309 WESVFIDD---QGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 309 ~~~li~~~---~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
-+..+... .......+.+. ++++++.....+.+.+++++..+
T Consensus 403 ~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~ 449 (740)
T 4a5s_A 403 KVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVN 449 (740)
T ss_dssp EEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTT
T ss_pred cceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCC
Confidence 12123211 11223334443 46777776665667788887653
No 199
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.37 E-value=1.8e-11 Score=128.01 Aligned_cols=115 Identities=13% Similarity=-0.017 Sum_probs=87.0
Q ss_pred EEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcC--------CCCCCCCCccccccc--
Q 004839 479 SVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADV--------RGGGGGGKKWHHDGR-- 548 (728)
Q Consensus 479 ~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~--------RG~g~~G~~~~~~~~-- 548 (728)
.+++.|++|.+ .++.|+||.+||+.. .+.+||+++.+|+ +|+.++|. |+..-.
T Consensus 124 sf~~~i~lP~g---~~P~Pvii~~~~~~~-------------~~~~G~A~i~f~~~~va~d~~~gsrG~g~-f~~ly~~~ 186 (433)
T 4g4g_A 124 SFSASIRKPSG---AGPFPAIIGIGGASI-------------PIPSNVATITFNNDEFGAQMGSGSRGQGK-FYDLFGRD 186 (433)
T ss_dssp EEEEEEECCSS---SCCEEEEEEESCCCS-------------CCCTTSEEEEECHHHHSCCSSGGGTTCSH-HHHHHCTT
T ss_pred EEEEEEECCCC---CCCccEEEEECCCcc-------------ccCCCeEEEEeCCcccccccCCCcCCccc-cccccCCc
Confidence 35788888875 478899999987421 1468999999997 55556666 553221
Q ss_pred cCCCCCcH--HHHHHHHHHHHH----cCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 004839 549 RTKKLNSI--KDFISCARFLIE----KEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLD 611 (728)
Q Consensus 549 ~~~~~~~~--~D~~~~~~~l~~----~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d 611 (728)
..++.... =|+..+++||.. +..+|++||+|+|+|+||..++++++.. ++|+++|+.+|..+
T Consensus 187 ~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~~ 254 (433)
T 4g4g_A 187 HSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGAG 254 (433)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCTT
T ss_pred cchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCCC
Confidence 12222111 377889999998 8899999999999999999999999975 58999999998655
No 200
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.37 E-value=4.5e-12 Score=130.88 Aligned_cols=245 Identities=13% Similarity=0.068 Sum_probs=138.3
Q ss_pred ceEEEEEEECC-CCcEEEEEEEEcCCCC-----CCCCccEEEEEcCCCCCCcCcccHH---HHHHHHHCCeEEEEEcCCC
Q 004839 465 YSCEQYDVPSH-DGISVPLTIIYSPKYK-----KENQNPGLLHGHGAYGELLDKRWRS---ELKSLLDRGWVVAFADVRG 535 (728)
Q Consensus 465 ~~~~~~~~~s~-dG~~i~~~l~~p~~~~-----~~~~~P~vv~~hGg~~~~~~~~~~~---~~~~l~~~Gy~v~~~d~RG 535 (728)
.+..++++.|. -|.+..+.|++|++.. +++++|+|++.||..+.. ..|.. ..+.+.+.|.++++++..-
T Consensus 12 G~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~--~~w~~~~~~~~~~~~~~~~~v~p~~~p 89 (299)
T 4fol_A 12 GRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTP--DNASEKAFWQFQADKYGFAIVFPDTSP 89 (299)
T ss_dssp EEEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCH--HHHHHHSCHHHHHHHHTCEEEEECSSC
T ss_pred CEEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCCh--HHHHHhchHhHHHHHcCchhhccCCCc
Confidence 46677888775 4789999999998753 356899999999976533 33432 2344556799999998421
Q ss_pred CC-----C--------CCCccccccccC--CCCCcHHHHH-HHH-HHHHHc-------CCCCCCcEEEEEeCccHHHHHH
Q 004839 536 GG-----G--------GGKKWHHDGRRT--KKLNSIKDFI-SCA-RFLIEK-------EIVKEHKLAGWGYSAGGLLVAA 591 (728)
Q Consensus 536 ~g-----~--------~G~~~~~~~~~~--~~~~~~~D~~-~~~-~~l~~~-------~~~d~~ri~i~G~S~GG~~~~~ 591 (728)
.+ + .+..|+...... .+...++|++ ..+ .++.++ ...++++.+|.|+||||+.++.
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~ 169 (299)
T 4fol_A 90 RGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAIC 169 (299)
T ss_dssp CSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHH
T ss_pred ceeecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHH
Confidence 11 0 111111111000 0112333332 222 222221 2345678999999999999999
Q ss_pred HHHhC--CCceeEEEEeCCcccchhhccCCCCCCCccccc-ccCCCCCHHHHHHHHccCccccccc--CCCCCeEEEEcC
Q 004839 592 AINCC--PDLFRAVVLEVPFLDATNTLLYPILPLIAADYE-EFGYPGDIDDFHAIRNYSPYDNIQK--DVLYPAVLVTSS 666 (728)
Q Consensus 592 ~~~~~--p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~-~~g~p~~~~~~~~~~~~sP~~~i~~--~~~~P~lli~g~ 666 (728)
++.++ |++|+++.+.+|+.+..... +...... .+|.. ...+.+++|...+.+ ....|.++|.+|
T Consensus 170 ~al~~~~~~~~~~~~s~s~~~~p~~~~------~~~~~~~~~~g~~-----~~~~~~~d~~~l~~~~~~~~~~~i~id~G 238 (299)
T 4fol_A 170 GYLKGYSGKRYKSCSAFAPIVNPSNVP------WGQKAFKGYLGEE-----KAQWEAYDPCLLIKNIRHVGDDRILIHVG 238 (299)
T ss_dssp HHHHTGGGTCCSEEEEESCCCCGGGSH------HHHHHHHHHTC----------CGGGCHHHHGGGSCCCTTCCEEEEEE
T ss_pred HHHhCCCCCceEEEEecccccCccccc------ccccccccccccc-----hhhhhhcCHHHHHHhcccCCCCceEEEec
Confidence 99874 67899999999987754311 0000111 12221 122344455443332 133455666555
Q ss_pred CCCCCCHHH--HHHHHHHHHhCCCCCCCccEEE--EcCCCCCCCchhhhHHHHHHHHHHHHHhhcC
Q 004839 667 FNTRFGVWE--AAKWVARVRESTIYDPKRPILL--NLTTDIVEENRYLQCKESALETAFLIKMMES 728 (728)
Q Consensus 667 ~D~~Vp~~~--~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~afl~~~l~~ 728 (728)
.++..-..+ ++.|.+++++++++ ..+.+ .++.+|..---. ..+.+.++|.+++|||
T Consensus 239 ~~D~f~~~~l~~~~f~~a~~~~g~~---~~~~~r~~~GydHsy~f~~---~fi~dhl~fha~~Lgl 298 (299)
T 4fol_A 239 DSDPFLEEHLKPELLLEAVKATSWQ---DYVEIKKVHGFDHSYYFVS---TFVPEHAEFHARNLGL 298 (299)
T ss_dssp TTCTTHHHHTCTHHHHHHHTTSTTT---TCEEEEEETTCCSSHHHHH---HHHHHHHHHHHHHTTC
T ss_pred CCCcchhhhcCHHHHHHHHHhcCCC---ceEEEEeCCCCCCCHHHHH---HHHHHHHHHHHHhcCC
Confidence 554322222 47899999998865 34556 455579521112 2244568999999986
No 201
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.07 E-value=4.7e-14 Score=145.64 Aligned_cols=121 Identities=21% Similarity=0.206 Sum_probs=84.2
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.||.++++... ++.|+||++||..+.. ..|......|+ +||.|+.+|+||+|.+...-. .......
T Consensus 12 ~~g~~~~~~~~--------g~~p~vv~lHG~~~~~--~~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~---~~~~~~~ 77 (304)
T 3b12_A 12 VGDVTINCVVG--------GSGPALLLLHGFPQNL--HMWARVAPLLA-NEYTVVCADLRGYGGSSKPVG---APDHANY 77 (304)
Confidence 47777654321 2357899999976543 34666677777 899999999999997533210 0001223
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLD 611 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~d 611 (728)
+++++.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+.+|...
T Consensus 78 ~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (304)
T 3b12_A 78 SFRAMASDQRELMRT--LGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPT 132 (304)
Confidence 455555555555533 2446899999999999999999999999999999988654
No 202
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.37 E-value=7.6e-12 Score=127.27 Aligned_cols=104 Identities=18% Similarity=0.273 Sum_probs=77.4
Q ss_pred ccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004839 496 NPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 575 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 575 (728)
.|.||++||..++. ..|......|+++||.|+.+|+||+|.+... ...+++++.+.+..++++-..++.
T Consensus 16 ~~~vvllHG~~~~~--~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~---------~~~~~~~~a~~l~~~l~~l~~~~~ 84 (264)
T 1r3d_A 16 TPLVVLVHGLLGSG--ADWQPVLSHLARTQCAALTLDLPGHGTNPER---------HCDNFAEAVEMIEQTVQAHVTSEV 84 (264)
T ss_dssp BCEEEEECCTTCCG--GGGHHHHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTTCCTTS
T ss_pred CCcEEEEcCCCCCH--HHHHHHHHHhcccCceEEEecCCCCCCCCCC---------CccCHHHHHHHHHHHHHHhCcCCC
Confidence 48899999976644 5677788888768999999999999976321 113566777777666665333323
Q ss_pred cEEEEEeCccHHHHHH---HHHhCCCceeEEEEeCCcc
Q 004839 576 KLAGWGYSAGGLLVAA---AINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 576 ri~i~G~S~GG~~~~~---~~~~~p~~f~a~v~~~p~~ 610 (728)
++.++||||||.+++. ++.++|++++++|+.++..
T Consensus 85 p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~ 122 (264)
T 1r3d_A 85 PVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHF 122 (264)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCC
T ss_pred ceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCC
Confidence 4999999999999999 7778999999999987643
No 203
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.36 E-value=3.4e-10 Score=119.46 Aligned_cols=200 Identities=12% Similarity=0.130 Sum_probs=131.2
Q ss_pred EeeceeeCCCCCEEEEEEEcC----CCcEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDK----DNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~----g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.++.+++ ||++|||+.... +....+|+++|+++|+...+ .....+.|||||+.|+|...+......+||++
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l---~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~ 90 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI---ENATMPRISPDGKKIAFMRANEEKKVSEIWVA 90 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE---ESCEEEEECTTSSEEEEEEEETTTTEEEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc---ccCCCeEECCCCCEEEEEEeccCCCcceEEEE
Confidence 5667778 999999986532 22367899999999986655 45678999999999999876543345579999
Q ss_pred ECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcC------------------------CCceEEEEEeCCCCCCCe
Q 004839 201 IIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFS------------------------TTSSKVFLINAADPFSGL 256 (728)
Q Consensus 201 ~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~------------------------~~~~~l~~~dl~~~~~~~ 256 (728)
++.+++... +..... ...+.|||||++|++.+.. .....||++|+.+ ++.
T Consensus 91 ~~~~g~~~~-l~~~~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~--~~~ 164 (347)
T 2gop_A 91 DLETLSSKK-ILEAKN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES--EEV 164 (347)
T ss_dssp ETTTTEEEE-EEEESE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT--TEE
T ss_pred ECCCCceEE-EEcCCC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC--CeE
Confidence 998764333 332222 4568999999999998753 1146899999987 444
Q ss_pred -EEeeecCCceEEEEeecCCEEEEEEcCCccCCCCC-ceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEE
Q 004839 257 -TLIWECEGLAHCIVEHHEGFLYLFTDAAKEGQEAD-NHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALI 334 (728)
Q Consensus 257 -~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~ 334 (728)
+.+... ......+++|| +++.++.+....... ...|+.++ . +.++.+... ..+..+...++.|++.
T Consensus 165 ~~~l~~~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d-~-----~~~~~l~~~---~~~~~~spdg~~l~~~ 232 (347)
T 2gop_A 165 IEEFEKP-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE-D-----GKEEKMFEK---VSFYAVDSDGERILLY 232 (347)
T ss_dssp EEEEEEE-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE-T-----TEEEEEEEE---ESEEEEEECSSCEEEE
T ss_pred EeeecCC-CcccccCCCCe--EEEEEecccccccccccccEEEeC-C-----CceEEeccC---cceeeECCCCCEEEEE
Confidence 555552 33455677877 666665432110001 35788887 4 344555443 2233445556777777
Q ss_pred EecC-----CeeEEEEEe
Q 004839 335 LREG-----RTYRLCSVS 347 (728)
Q Consensus 335 ~~~~-----g~~~l~~~~ 347 (728)
.... ...+|++++
T Consensus 233 ~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 233 GKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp ECCSSSCCCSSCEEEEEC
T ss_pred EccccCCccccceEEEEC
Confidence 6543 245788887
No 204
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.36 E-value=1.6e-10 Score=118.00 Aligned_cols=202 Identities=11% Similarity=-0.003 Sum_probs=134.7
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCC-CceeccCc-c--ceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS-GALCSKPQ-A--VRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~t-g~~~~~~~-~--~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.+..++|||||++||+.. .+ .|+++|+++ ++...+.. . ..+..+.|+|||+.|++...+. ....+||.+
T Consensus 43 ~v~~~~~spdg~~l~~~~--~~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~~l~~~ 115 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS--EG----LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVE-FGKSAIYLL 115 (297)
T ss_dssp CCEEEEECTTSSEEEEEE--TT----EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTT-TSSCEEEEE
T ss_pred ceEeeEECCCCCEEEEEc--CC----eEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCC-CCcceEEEE
Confidence 356788999999999974 23 599999999 87665543 2 3567799999999999986432 235689999
Q ss_pred ECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCc-eEEEEeecCCEEEE
Q 004839 201 IIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL-AHCIVEHHEGFLYL 279 (728)
Q Consensus 201 ~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~-~~~~~~~dg~~l~~ 279 (728)
++.++.... +.. ... ...+.|||||++|++.........||.+++.+ +..+.+...... ....++++|+.|++
T Consensus 116 ~~~~~~~~~-~~~-~~~--~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~ 189 (297)
T 2ojh_A 116 PSTGGTPRL-MTK-NLP--SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS--GVETRLTHGEGRNDGPDYSPDGRWIYF 189 (297)
T ss_dssp ETTCCCCEE-CCS-SSS--EEEEEECTTSSEEEEEEEETTEEEEEEEETTT--CCEEECCCSSSCEEEEEECTTSSEEEE
T ss_pred ECCCCceEE-eec-CCC--ccceEECCCCCEEEEEECCCCceEEEEEECCC--CcceEcccCCCccccceECCCCCEEEE
Confidence 987764322 222 222 34578999999999887766667899999876 445555544333 33456788888888
Q ss_pred EEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecC--------CeeEEEEEecC
Q 004839 280 FTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREG--------RTYRLCSVSLP 349 (728)
Q Consensus 280 ~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~--------g~~~l~~~~l~ 349 (728)
.+..++ ..+|+.++.. . .....+.. ....+..+.+. ++.|++....+ +...|+++++.
T Consensus 190 ~~~~~~------~~~i~~~~~~-~---~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 190 NSSRTG------QMQIWRVRVD-G---SSVERITD--SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp EECTTS------SCEEEEEETT-S---SCEEECCC--CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred EecCCC------CccEEEECCC-C---CCcEEEec--CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 776443 3678888754 1 22333322 22344555554 45666666554 34679999986
Q ss_pred CC
Q 004839 350 LP 351 (728)
Q Consensus 350 ~~ 351 (728)
++
T Consensus 258 ~~ 259 (297)
T 2ojh_A 258 GG 259 (297)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 205
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.36 E-value=3.8e-12 Score=130.74 Aligned_cols=123 Identities=15% Similarity=0.204 Sum_probs=83.0
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHH-----HHHHHHHCCeEEEEEcCCCCCCCCCccccccccC
Q 004839 476 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRS-----ELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRT 550 (728)
Q Consensus 476 dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~-----~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~ 550 (728)
+|.++.+...-++ +...|+||++||..+... ..|.. ....|++ +|.|+++|+||+|....... ..
T Consensus 19 ~~~~l~y~~~G~~----~~~~p~vvllHG~~~~~~-~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~----~~ 88 (286)
T 2qmq_A 19 PYGSVTFTVYGTP----KPKRPAIFTYHDVGLNYK-SCFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFP----LG 88 (286)
T ss_dssp TTEEEEEEEESCC----CTTCCEEEEECCTTCCHH-HHHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCC----TT
T ss_pred CCeEEEEEeccCC----CCCCCeEEEeCCCCCCch-hhhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCCC----CC
Confidence 5777765443111 123589999999765431 11332 4455654 79999999999985422111 01
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 551 KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 551 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
....+++++.+.+..+++.- +.+++.++|+|+||.+++.++.++|++++++|+.+|..
T Consensus 89 ~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 146 (286)
T 2qmq_A 89 YQYPSLDQLADMIPCILQYL--NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDP 146 (286)
T ss_dssp CCCCCHHHHHHTHHHHHHHH--TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CCccCHHHHHHHHHHHHHHh--CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCC
Confidence 11126777777666666442 33589999999999999999999999999999999865
No 206
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.35 E-value=5e-13 Score=137.24 Aligned_cols=221 Identities=13% Similarity=-0.001 Sum_probs=115.7
Q ss_pred ceEEEEEEECCCCcE-EEEEEEEcCCCC------CCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCC
Q 004839 465 YSCEQYDVPSHDGIS-VPLTIIYSPKYK------KENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGG 537 (728)
Q Consensus 465 ~~~~~~~~~s~dG~~-i~~~l~~p~~~~------~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g 537 (728)
...|.+.|++.++.. ...|+..+.... .....|.||++||..+.. ..|......|++ ||.|+.+|+||+|
T Consensus 13 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvllHG~~~~~--~~~~~l~~~L~~-~~~v~~~D~~G~G 89 (280)
T 3qmv_A 13 LGTENLYFQSNALLSQRSAWFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGTV--SAFRGWQERLGD-EVAVVPVQLPGRG 89 (280)
T ss_dssp ---------------CHHHHSCCCCCCCCCCCCCTTTCSEEEEEECCTTCCG--GGGTTHHHHHCT-TEEEEECCCTTSG
T ss_pred cCcceeeeecchhhhhcchheecCCCCCcccccccCCCCceEEEECCCCCCh--HHHHHHHHhcCC-CceEEEEeCCCCC
Confidence 366778888887732 222333222111 011238899999976543 456777777776 9999999999998
Q ss_pred CCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCcee----EEEEeCCcccch
Q 004839 538 GGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFR----AVVLEVPFLDAT 613 (728)
Q Consensus 538 ~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~----a~v~~~p~~d~~ 613 (728)
.+... ....+++++.+.+..+++.-. ..+++.++|+|+||.+++.++.++|++++ .+++..+.....
T Consensus 90 ~S~~~--------~~~~~~~~~a~~~~~~l~~~~-~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~ 160 (280)
T 3qmv_A 90 LRLRE--------RPYDTMEPLAEAVADALEEHR-LTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHL 160 (280)
T ss_dssp GGTTS--------CCCCSHHHHHHHHHHHHHHTT-CSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGG
T ss_pred CCCCC--------CCCCCHHHHHHHHHHHHHHhC-CCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCC
Confidence 65221 223467777666665554321 34789999999999999999998887765 555544322111
Q ss_pred hhccCCCCCCCcc----ccccc-CCCCC---------------HHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCH
Q 004839 614 NTLLYPILPLIAA----DYEEF-GYPGD---------------IDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGV 673 (728)
Q Consensus 614 ~~~~~~~~~~~~~----~~~~~-g~p~~---------------~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~ 673 (728)
... ......... ....+ +.+.. .........+.+.. +.. +++|+|+|+|+.|..+|+
T Consensus 161 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-i~~P~l~i~G~~D~~~~~ 237 (280)
T 3qmv_A 161 YGD-RADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDWHP-RPP-LDCPTTAFSAAADPIATP 237 (280)
T ss_dssp CSC-CCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHHHHHHTCCCCC-CCC-BCSCEEEEEEEECSSSCH
T ss_pred cCc-ccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHHHHHHhccccC-CCc-eecCeEEEEecCCCCcCh
Confidence 000 000000000 00001 11100 01122233333322 333 789999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCc
Q 004839 674 WEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN 707 (728)
Q Consensus 674 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 707 (728)
..+.++.+.+... ..+.+.+ +||....
T Consensus 238 ~~~~~~~~~~~~~------~~~~~~~-ggH~~~~ 264 (280)
T 3qmv_A 238 EMVEAWRPYTTGS------FLRRHLP-GNHFFLN 264 (280)
T ss_dssp HHHHTTGGGBSSC------EEEEEEE-EETTGGG
T ss_pred HHHHHHHHhcCCc------eEEEEec-CCCeEEc
Confidence 8887766554321 2233244 5997543
No 207
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.34 E-value=8.9e-12 Score=130.69 Aligned_cols=116 Identities=16% Similarity=0.076 Sum_probs=84.8
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.+|..+.+.. .+ .++.|.||++||..++. ..|......|+++ |.|+++|.||+|.+... .....
T Consensus 28 ~~g~~l~y~~---~G---~g~~~~vvllHG~~~~~--~~w~~~~~~L~~~-~~via~Dl~GhG~S~~~-------~~~~~ 91 (318)
T 2psd_A 28 VLDSFINYYD---SE---KHAENAVIFLHGNATSS--YLWRHVVPHIEPV-ARCIIPDLIGMGKSGKS-------GNGSY 91 (318)
T ss_dssp ETTEEEEEEE---CC---SCTTSEEEEECCTTCCG--GGGTTTGGGTTTT-SEEEEECCTTSTTCCCC-------TTSCC
T ss_pred eCCeEEEEEE---cC---CCCCCeEEEECCCCCcH--HHHHHHHHHhhhc-CeEEEEeCCCCCCCCCC-------CCCcc
Confidence 4787766432 12 13346899999976543 3465556666554 79999999999976332 11224
Q ss_pred cHHHHHHHHHHHHHcCCCCC-CcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCC
Q 004839 555 SIKDFISCARFLIEKEIVKE-HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVP 608 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~-~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p 608 (728)
+++++.+.+..++++- +. +++.++||||||.+++.++.++|++++++|+..+
T Consensus 92 ~~~~~a~dl~~ll~~l--~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~ 144 (318)
T 2psd_A 92 RLLDHYKYLTAWFELL--NLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMES 144 (318)
T ss_dssp SHHHHHHHHHHHHTTS--CCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhc--CCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEecc
Confidence 6888888888888652 33 7899999999999999999999999999998654
No 208
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.33 E-value=5.3e-11 Score=127.91 Aligned_cols=257 Identities=9% Similarity=-0.025 Sum_probs=142.0
Q ss_pred ceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-ccee-ee-------------------EEEecCCCEEEEE
Q 004839 128 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRV-SN-------------------IAWAKDGQALIYV 186 (728)
Q Consensus 128 ~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~-~~-------------------~~WspDg~~l~y~ 186 (728)
.+.|||||++|||.... + +|+++|+++|+...+.. .... .. ..|+||++.+++.
T Consensus 85 ~~~~spdg~~l~~~~~~-~----~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~ 159 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNE-L----NLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFA 159 (396)
T ss_dssp TCEECTTSSEEEEEETT-T----EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHH
T ss_pred cceECCCCCEEEEEEcC-C----cEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeee
Confidence 36799999999998643 2 59999999998665533 1110 00 2344444444332
Q ss_pred EecCCCCcceeEEEECCCCCceeEEeeecCcceEEEEEEcC-CCCEEEEEEcCCCc---eEEEEEeCCCCCCCeEEeeec
Q 004839 187 VTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTK-DFHFVCVHTFSTTS---SKVFLINAADPFSGLTLIWEC 262 (728)
Q Consensus 187 ~~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~---~~l~~~dl~~~~~~~~~l~~~ 262 (728)
..........||++++.+++... +... ......+.||| ||+.|++.+..... .+||++|+++ +..+.+...
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~~~~-~~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~ 234 (396)
T 3c5m_A 160 EFYHTNPTCRLIKVDIETGELEV-IHQD--TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG--SNVRKIKEH 234 (396)
T ss_dssp HHHHTCCCEEEEEEETTTCCEEE-EEEE--SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS--CCCEESSCC
T ss_pred eeccCCCcceEEEEECCCCcEEe-eccC--CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC--CceeEeecc
Confidence 11001234579999998875333 3322 22345678999 89988888753221 6899999976 445555543
Q ss_pred CCc---eEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEe-eCCEEEEEEe--
Q 004839 263 EGL---AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDF-CKTHMALILR-- 336 (728)
Q Consensus 263 ~~~---~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~-~~~~lv~~~~-- 336 (728)
... ....+++||+.|++.++..+.. ...|+.+++. . +..+.+.. .+... ..+.. .++ +++...
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~----~~~l~~~d~~-~---g~~~~l~~-~~~~~-~~~s~~dg~-~l~~~~~~ 303 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVSYFKGQT----DRVIYKANPE-T---LENEEVMV-MPPCS-HLMSNFDGS-LMVGDGCD 303 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTTC----CEEEEEECTT-T---CCEEEEEE-CCSEE-EEEECSSSS-EEEEEECC
T ss_pred CCCccccceEECCCCCEEEEEecCCCCc----cceEEEEECC-C---CCeEEeee-CCCCC-CCccCCCCc-eEEEecCC
Confidence 212 2236678999888887754321 2448888875 2 33333332 22222 22333 344 444322
Q ss_pred ------------cCCeeEEEEEecCCCCCCcceeecccccccccCCCce-------eeeecCCCccCCCcEEEEEEccCC
Q 004839 337 ------------EGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYV-------SQIVPGPNYDYYSSTMRFAISSPV 397 (728)
Q Consensus 337 ------------~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~-------~~i~~~~~~~~~~~~~~~~~ss~~ 397 (728)
.++...|+++++.+++- ..+. ..+... ........++.++..+++..+. .
T Consensus 304 ~p~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~l~-------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~-~ 372 (396)
T 3c5m_A 304 APVDVADADSYNIENDPFLYVLNTKAKSA---QKLC-------KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF-E 372 (396)
T ss_dssp C----------CCCCCCEEEEEETTTTBC---CEEE-------ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-T
T ss_pred cceeeccccccccCCCCcEEEEecccCce---EEcc-------CCCCccccccccccCCCCCceEccCCCeEEEEecC-C
Confidence 23457899999865421 1111 001000 0000112345677788776654 3
Q ss_pred CCceEEEEECCCCeEEEEE
Q 004839 398 MPDAVVDYDLSYGKWNIIQ 416 (728)
Q Consensus 398 ~p~~~~~~~~~~~~~~~l~ 416 (728)
.+..+|.+|+.+++.+.+.
T Consensus 373 ~~~~l~~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 373 GVPAIYIADVPESYKHLEH 391 (396)
T ss_dssp SSCEEEEEECCTTCC----
T ss_pred CCceEEEEEEccccccccc
Confidence 5668999999888765543
No 209
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.33 E-value=1.3e-11 Score=124.63 Aligned_cols=116 Identities=11% Similarity=0.040 Sum_probs=87.0
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCc
Q 004839 476 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNS 555 (728)
Q Consensus 476 dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~ 555 (728)
||.++.+...-+ ...|+||++||..+.. ..|......|++ +|.|+.+|+||+|.+... ....+
T Consensus 7 ~g~~l~~~~~g~------~~~~~vv~lHG~~~~~--~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~--------~~~~~ 69 (264)
T 3ibt_A 7 NGTLMTYSESGD------PHAPTLFLLSGWCQDH--RLFKNLAPLLAR-DFHVICPDWRGHDAKQTD--------SGDFD 69 (264)
T ss_dssp TTEECCEEEESC------SSSCEEEEECCTTCCG--GGGTTHHHHHTT-TSEEEEECCTTCSTTCCC--------CSCCC
T ss_pred CCeEEEEEEeCC------CCCCeEEEEcCCCCcH--hHHHHHHHHHHh-cCcEEEEccccCCCCCCC--------ccccC
Confidence 676666433211 1247899999976644 456667777754 699999999999976432 22346
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC-CCceeEEEEeCCcc
Q 004839 556 IKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC-PDLFRAVVLEVPFL 610 (728)
Q Consensus 556 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~f~a~v~~~p~~ 610 (728)
++++.+.+..++++- +.+++.++|||+||.+++.++.++ |++++++|+.+|..
T Consensus 70 ~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~ 123 (264)
T 3ibt_A 70 SQTLAQDLLAFIDAK--GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL 123 (264)
T ss_dssp HHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS
T ss_pred HHHHHHHHHHHHHhc--CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC
Confidence 778777777777543 346899999999999999999999 99999999998865
No 210
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.31 E-value=1.8e-12 Score=133.45 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=78.7
Q ss_pred ccEEEEEcC-CCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCC
Q 004839 496 NPGLLHGHG-AYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 574 (728)
Q Consensus 496 ~P~vv~~hG-g~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 574 (728)
.|+||++|| |... ....|......|+ +||.|+.+|+||+|.+.. ......+++|+.+.+..++++- ..
T Consensus 41 ~p~vv~lHG~G~~~-~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~-------~~~~~~~~~~~~~~l~~~l~~~--~~ 109 (292)
T 3l80_A 41 NPCFVFLSGAGFFS-TADNFANIIDKLP-DSIGILTIDAPNSGYSPV-------SNQANVGLRDWVNAILMIFEHF--KF 109 (292)
T ss_dssp SSEEEEECCSSSCC-HHHHTHHHHTTSC-TTSEEEEECCTTSTTSCC-------CCCTTCCHHHHHHHHHHHHHHS--CC
T ss_pred CCEEEEEcCCCCCc-HHHHHHHHHHHHh-hcCeEEEEcCCCCCCCCC-------CCcccccHHHHHHHHHHHHHHh--CC
Confidence 389999997 3322 2235666666665 799999999999997531 1122357888888888887653 33
Q ss_pred CcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCc
Q 004839 575 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 609 (728)
Q Consensus 575 ~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~ 609 (728)
+++.++|||+||.+++.++.++|++++++|+..|.
T Consensus 110 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 144 (292)
T 3l80_A 110 QSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPT 144 (292)
T ss_dssp SEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCC
T ss_pred CCeEEEEEchhHHHHHHHHHhCchheeeEEEECCC
Confidence 58999999999999999999999999999999854
No 211
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.31 E-value=3.4e-10 Score=131.02 Aligned_cols=210 Identities=11% Similarity=0.011 Sum_probs=137.8
Q ss_pred EEeeceeeCCCCCEEEEEEEcC-----CCcEEEEEEEECCC------CceeccC-c-cceeeeEEEecCCCEEEEEEecC
Q 004839 124 AYEELSEVSPDHKFLAYTMYDK-----DNDYFTLSVRNLNS------GALCSKP-Q-AVRVSNIAWAKDGQALIYVVTDQ 190 (728)
Q Consensus 124 ~~~~~~~~SPDG~~lA~~~~~~-----g~e~~~l~v~dl~t------g~~~~~~-~-~~~~~~~~WspDg~~l~y~~~~~ 190 (728)
.....+.|||||++|||+.... +....+|+++|+++ ++...++ . ...+..+.|||||+.|+|+..+.
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECT
T ss_pred ccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCC
Confidence 3567889999999999987541 13457899999999 7766665 4 34567889999999999997654
Q ss_pred CC---CcceeEEEECC-CCC--ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC
Q 004839 191 NK---RPYQIYCSIIG-STD--EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG 264 (728)
Q Consensus 191 ~~---~~~~v~~~~l~-t~~--~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~ 264 (728)
.. ...+||++++. ++. ....+..... .....+.|||||+ |++.++......||++|+++ ++.+.+.....
T Consensus 210 ~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~-~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~--~~~~~l~~~~~ 285 (662)
T 3azo_A 210 PRMPWEGTELKTARVTEDGRFADTRTLLGGPE-EAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPAT--GAATQLCRREE 285 (662)
T ss_dssp TCCTTTCEEEEEEEECTTSCEEEEEEEEEETT-BCEEEEEECTTSC-EEEEECTTSSCEEEEECTTT--CCEEESSCCSS
T ss_pred CCCCCCCcEEEEEEECCCCcccccEEeCCCCC-ceEcceEECCCCe-EEEEECCCCCeEEEEEECCC--Cceeecccccc
Confidence 32 23589999998 452 2222332211 2335688999999 77777766667899999876 45666654332
Q ss_pred ce----------EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEE-EeeCCEEEE
Q 004839 265 LA----------HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDV-DFCKTHMAL 333 (728)
Q Consensus 265 ~~----------~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~-~~~~~~lv~ 333 (728)
.. ...+++ ++.+++..+. + ..+|+.++.+ . +..+.+..+ ...+..+ ...++.+++
T Consensus 286 ~~~~p~w~~~~~~~~~~~-~~~~~~~~~~-~------~~~l~~~d~~-~---~~~~~l~~~--~~~~~~~~s~~~~~~~~ 351 (662)
T 3azo_A 286 EFAGPLWTPGMRWFAPLA-NGLIAVVHGK-G------AAVLGILDPE-S---GELVDAAGP--WTEWAATLTVSGTRAVG 351 (662)
T ss_dssp BSSCCCCSTTCCSEEECT-TSCEEEEEBS-S------SCEEEEEETT-T---TEEEECCSS--CCEEEEEEEEETTEEEE
T ss_pred cccCccccccCceEeEeC-CCEEEEEEEc-C------ccEEEEEECC-C---CcEEEecCC--CCeEEEEEecCCCEEEE
Confidence 21 122333 4456666665 3 3679988875 1 233443222 3345566 677787777
Q ss_pred EEecCC-eeEEEEEecCCC
Q 004839 334 ILREGR-TYRLCSVSLPLP 351 (728)
Q Consensus 334 ~~~~~g-~~~l~~~~l~~~ 351 (728)
...... ...|+.+++.++
T Consensus 352 ~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 352 VAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp EEEETTEEEEEEEEETTTC
T ss_pred EEcCCCCCCEEEEEECCCC
Confidence 765544 458999987654
No 212
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.30 E-value=4.7e-10 Score=131.80 Aligned_cols=260 Identities=12% Similarity=0.056 Sum_probs=162.6
Q ss_pred eCCCCCEEEEEEEcCCCcEEEEEEEECC---CCceeccC------cc--ceeeeEEEecCCCEEEEEEecCCCCcceeEE
Q 004839 131 VSPDHKFLAYTMYDKDNDYFTLSVRNLN---SGALCSKP------QA--VRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 199 (728)
Q Consensus 131 ~SPDG~~lA~~~~~~g~e~~~l~v~dl~---tg~~~~~~------~~--~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~ 199 (728)
++|||++++|.....+.+...||+++.. +++...+. .. .....+.|||||+.|+|+..+...+..+|++
T Consensus 114 p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 114 PQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 4699999999998777667889999987 66544321 11 1467899999999999998765555578999
Q ss_pred EECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCC-----------ceEEEEEeCCCCCCCeEEeeecCC----
Q 004839 200 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT-----------SSKVFLINAADPFSGLTLIWECEG---- 264 (728)
Q Consensus 200 ~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-----------~~~l~~~dl~~~~~~~~~l~~~~~---- 264 (728)
.|+.+++......... .+.++.|||| +.|++.+.... ..+||+.++.++..+.+.+....+
T Consensus 194 ~dl~tg~~~~~~~~~~---~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~ 269 (741)
T 1yr2_A 194 VGVADGKPLADELKWV---KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR 269 (741)
T ss_dssp EETTTCCEEEEEEEEE---ESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC
T ss_pred EECCCCCCCCccCCCc---eeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE
Confidence 9999876222111111 1134789999 99999886544 457999999774333345544332
Q ss_pred ceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCC-CeEEeecCCCceEEEEEeeCCEEEEEEecCC-eeE
Q 004839 265 LAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRT-WESVFIDDQGLVVEDVDFCKTHMALILREGR-TYR 342 (728)
Q Consensus 265 ~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g-~~~ 342 (728)
.....+++||+.|++.++..... +..|+.++++ .. ... ++.+.... +.....+...++.|++..+.++ ..+
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~----~~~l~~~d~~-~~-~~~~~~~l~~~~-~~~~~~~~~dg~~l~~~s~~~~~~~~ 342 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDP----VNTVHVARVT-NG-KIGPVTALIPDL-KAQWDFVDGVGDQLWFVSGDGAPLKK 342 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCS----CCEEEEEEEE-TT-EECCCEEEECSS-SSCEEEEEEETTEEEEEECTTCTTCE
T ss_pred EEEEEECCCCCEEEEEEEccCCC----cceEEEEECC-CC-CCcccEEecCCC-CceEEEEeccCCEEEEEECCCCCCCE
Confidence 23456789999999888654211 3568888776 21 124 77766543 2333345567889998887765 578
Q ss_pred EEEEecCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEEE
Q 004839 343 LCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNII 415 (728)
Q Consensus 343 l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l 415 (728)
|++++++++. + .+. ..++-.... +. + .+..++.+++...... -.+++.+++.++..+.+
T Consensus 343 l~~~d~~~~~-~---~~~----~l~~~~~~~--l~-~--~~~~~~~lv~~~~~dg-~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 343 IVRVDLSGST-P---RFD----TVVPESKDN--LE-S--VGIAGNRLFASYIHDA-KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp EEEEECSSSS-C---EEE----EEECCCSSE--EE-E--EEEEBTEEEEEEEETT-EEEEEEEETTSCEEEEC
T ss_pred EEEEeCCCCc-c---ccE----EEecCCCCe--EE-E--EEEECCEEEEEEEECC-EEEEEEEeCCCCceeec
Confidence 9999976531 1 011 111111111 11 1 1223566766665433 35788888765544443
No 213
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.29 E-value=3.9e-10 Score=131.44 Aligned_cols=207 Identities=14% Similarity=0.101 Sum_probs=138.6
Q ss_pred eCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCcc--------ceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 131 VSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA--------VRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 131 ~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~--------~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
++|||++++|.....|.+...||+++..+|+...++.. .....+.|||||+.|+|+......+...|++.|+
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 56999999999887776677899999988875554321 1467899999999999998766656679999999
Q ss_pred CCCCce-eEEeeecCcceEEEEEEcCCCCEEEEEEcCCC----------ceEEEEEeCCCCCCCeEEeeecCC----ceE
Q 004839 203 GSTDED-ALLLEESNENVYVNIRHTKDFHFVCVHTFSTT----------SSKVFLINAADPFSGLTLIWECEG----LAH 267 (728)
Q Consensus 203 ~t~~~~-~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~----------~~~l~~~dl~~~~~~~~~l~~~~~----~~~ 267 (728)
.+++.. ..... ... +.++.|||||+.|++.+.... ..+||+.++.++..+.+.+....+ ...
T Consensus 155 ~tg~~~~~~~~~--~~~-~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~ 231 (695)
T 2bkl_A 155 DSGEWSKVDVIE--GGK-YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQ 231 (695)
T ss_dssp TTCCBCSSCCBS--CCT-TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEE
T ss_pred CCCCCcCCcccC--ccc-ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEE
Confidence 887521 10111 111 135789999999999887553 367999999875433345544322 234
Q ss_pred EEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecC-CeeEEEEE
Q 004839 268 CIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREG-RTYRLCSV 346 (728)
Q Consensus 268 ~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~-g~~~l~~~ 346 (728)
..+++||+.|++.++.... ...|+.++.. .+.++.+..... .....+...++ +++....+ +..+|+++
T Consensus 232 ~~~SpDG~~l~~~~~~~~~-----~~~l~~~~~~----~~~~~~l~~~~~-~~~~~~~~~g~-l~~~s~~~~~~~~l~~~ 300 (695)
T 2bkl_A 232 SDLSRDGKYLFVYILRGWS-----ENDVYWKRPG----EKDFRLLVKGVG-AKYEVHAWKDR-FYVLTDEGAPRQRVFEV 300 (695)
T ss_dssp EEECTTSCCEEEEEEETTT-----EEEEEEECTT----CSSCEEEEECSS-CCEEEEEETTE-EEEEECTTCTTCEEEEE
T ss_pred EEECCCCCEEEEEEeCCCC-----ceEEEEEcCC----CCceEEeecCCC-ceEEEEecCCc-EEEEECCCCCCCEEEEE
Confidence 5678999988887765411 3567777543 246777765432 22333333345 66665544 45789999
Q ss_pred ecCCC
Q 004839 347 SLPLP 351 (728)
Q Consensus 347 ~l~~~ 351 (728)
+++++
T Consensus 301 d~~~~ 305 (695)
T 2bkl_A 301 DPAKP 305 (695)
T ss_dssp BTTBC
T ss_pred eCCCC
Confidence 87653
No 214
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.29 E-value=3.1e-09 Score=109.86 Aligned_cols=225 Identities=11% Similarity=0.125 Sum_probs=149.6
Q ss_pred eEeCCeEEEEEccCCCeeEEEEEEecCCCcccccCCCCCCCccCCCCCCCcEEEeecccccccCCceEEeeceeeCCCCC
Q 004839 57 DLHHRRLYYRRVEEGKQYLVLCRRLVSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQEAERFGGYAYEELSEVSPDHK 136 (728)
Q Consensus 57 ~~~g~~~yy~~~~~g~e~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG~ 136 (728)
...|+++||+...++ ..+||.+.++ ...+.|.+-. + . -++|||+
T Consensus 22 ~~~g~~iy~~n~~d~---~~ly~~~~dg--------------------~~~~~l~~~~--~---~--------~i~~~g~ 65 (302)
T 3s25_A 22 CESDGEVFFSNTNDN---GRLYAMNIDG--------------------SNIHKLSNDT--A---M--------YINADKN 65 (302)
T ss_dssp EEETTEEEEEEGGGT---TEEEEEETTS--------------------CSCEEEEEEE--E---E--------EEEECSS
T ss_pred EEeCCEEEEEeCCCC---ceEEEEcCCC--------------------CCCEEccCCc--e---e--------eEEEcCC
Confidence 478999999975432 4688877654 2334444421 1 1 2689999
Q ss_pred EEEEEEEcCCC---------cEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCc
Q 004839 137 FLAYTMYDKDN---------DYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE 207 (728)
Q Consensus 137 ~lA~~~~~~g~---------e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~ 207 (728)
+|.|+....+. ....||.+++++++...++.. ....|++++++|||+.... .....||++++.....
T Consensus 66 ~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~---~~~~~s~~g~~Iy~~~~~~-~~~~~Iy~~~~dGs~~ 141 (302)
T 3s25_A 66 YVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD---PCIYASLIGNYIYYLHYDT-QTATSLYRIRIDGEEK 141 (302)
T ss_dssp EEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS---CEEEEEEETTEEEEEEESS-SSCEEEEEEETTSCCC
T ss_pred EEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC---CccEEEEeCCEEEEEeecC-CCCceEEEEECCCCCe
Confidence 99999765532 146799999999986665432 2347999999999985211 2345899999986544
Q ss_pred eeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCCEEEEEEcCCccC
Q 004839 208 DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKEG 287 (728)
Q Consensus 208 ~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~~ 287 (728)
.+++-. .. ..++++|+.|+++.. ....||++++++ +..+.|... .....+.|+++.||+....+
T Consensus 142 ~~lt~~-~~------~~~~~~g~~iy~t~~--g~~~Iy~~~l~g--~~~~~l~~~--~~~~~~~P~g~~iy~t~~~~--- 205 (302)
T 3s25_A 142 KKIKNH-YL------FTCNTSDRYFYYNNP--KNGQLYRYDTAS--QSEALFYDC--NCYKPVVLDDTNVYYMDVNR--- 205 (302)
T ss_dssp EEEESS-CC------CCSEEETTEEEEECT--TTCCEEEEETTT--TEEEEEECS--CEEEEEEEETTEEEEEEGGG---
T ss_pred EEEeCC-Cc------eEeeEECCEEEEEeC--CCceEEEEECCC--CCEEEEeCC--CccceeeecCCEEEEEEcCC---
Confidence 444322 11 245889999999876 456899999987 445566432 22223558999999876543
Q ss_pred CCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCC
Q 004839 288 QEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 288 ~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
+++|++++++ . .. +.++.. ..+..+++.++.|++..... ...|++++++.
T Consensus 206 ----~~~I~~~~ld-G---~~-~~~Lt~---~~~~~~~~~g~~Iy~~~~~~-~~~i~~~~~DG 255 (302)
T 3s25_A 206 ----DNAIVHVNIN-N---PN-PVVLTE---ANIEHYNVYGSLIFYQRGGD-NPALCVVKNDG 255 (302)
T ss_dssp ----TTEEEEECSS-S---CC-CEECSC---SCEEEEEEETTEEEEEECSS-SCEEEEEETTS
T ss_pred ----CcEEEEEECC-C---CC-eEEEeC---CCcceEEECCCEEEEEECCC-CcEEEEEECCC
Confidence 2679999987 2 22 333332 23467888899998765443 37899999874
No 215
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.29 E-value=2.1e-10 Score=134.14 Aligned_cols=258 Identities=12% Similarity=0.098 Sum_probs=149.1
Q ss_pred eeceeeCCCCCEEEEEEEcCCCc----EEEEEEEECCCCceeccCccc----eeeeEEEecCCCEEEEEEecCCCCccee
Q 004839 126 EELSEVSPDHKFLAYTMYDKDND----YFTLSVRNLNSGALCSKPQAV----RVSNIAWAKDGQALIYVVTDQNKRPYQI 197 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e----~~~l~v~dl~tg~~~~~~~~~----~~~~~~WspDg~~l~y~~~~~~~~~~~v 197 (728)
+..++|||||++|||..+..+.. ..+|+++|+++|+...++... .+..++|||||+.|+|.+. ..|
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~------~~i 136 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE------NNI 136 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET------TEE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC------CeE
Confidence 56788999999999997543221 257999999999875544321 2567999999999999863 379
Q ss_pred EEEECCCCCceeEEeeecCcc----------------eEEEEEEcCCCCEEEEEEcCCC---------------------
Q 004839 198 YCSIIGSTDEDALLLEESNEN----------------VYVNIRHTKDFHFVCVHTFSTT--------------------- 240 (728)
Q Consensus 198 ~~~~l~t~~~~~lv~~~~~~~----------------~~~~~~~SpDg~~l~~~~~~~~--------------------- 240 (728)
|+.++.++....+........ ....+.|||||++|++.+....
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (723)
T 1xfd_A 137 YYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPY 216 (723)
T ss_dssp EEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEE
T ss_pred EEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceec
Confidence 999998775433332211111 0146899999999998874321
Q ss_pred ----------ceEEEEEeCCCCCCCeEEeeecC-----Cc--eEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCC
Q 004839 241 ----------SSKVFLINAADPFSGLTLIWECE-----GL--AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDAS 303 (728)
Q Consensus 241 ----------~~~l~~~dl~~~~~~~~~l~~~~-----~~--~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~ 303 (728)
...|+++|++++. ..+.+.... .. ....+++||+.+++..+.... ...|+.++++ .
T Consensus 217 ~~~~~G~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~-----~~~i~~~d~~-~ 289 (723)
T 1xfd_A 217 HYPKAGSENPSISLHVIGLNGPT-HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQN-----VSILTLCDAT-T 289 (723)
T ss_dssp ECCBTTSCCCEEEEEEEESSSSC-CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSC-----EEEEEEEETT-T
T ss_pred cCCCCCCCCCeeEEEEEECCCCc-eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCC-----eEEEEEEeCC-C
Confidence 2379999998742 124444321 11 224567888877666665422 3567777775 2
Q ss_pred CCCCCCeEEeecCCCceE----EE--EEeeCCEEEEE-EecCC----eeEEEEEe-cCCCCCCcceeecccccccccCC-
Q 004839 304 FPSRTWESVFIDDQGLVV----ED--VDFCKTHMALI-LREGR----TYRLCSVS-LPLPAGKGVVHLKELHPHFLPLP- 370 (728)
Q Consensus 304 ~~~~~~~~li~~~~~~~i----~~--~~~~~~~lv~~-~~~~g----~~~l~~~~-l~~~~~~~~~~~~~~~~~~~~~p- 370 (728)
++...++.......+ .. +...++.|++. ...++ ..+|++++ ..++.. . ....+.-.
T Consensus 290 ---g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~-----~~~~l~~~~ 358 (723)
T 1xfd_A 290 ---GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN---D-----NIQSITSGD 358 (723)
T ss_dssp ---CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSS---C-----CCCBSCCSS
T ss_pred ---CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCc---c-----ceeEeecCC
Confidence 333333322111111 12 33345667776 55666 66899888 333210 0 00111111
Q ss_pred CceeeeecCCCccCCCcEEEEEEccCC-CCceEEEEECCCC
Q 004839 371 KYVSQIVPGPNYDYYSSTMRFAISSPV-MPDAVVDYDLSYG 410 (728)
Q Consensus 371 ~~~~~i~~~~~~~~~~~~~~~~~ss~~-~p~~~~~~~~~~~ 410 (728)
..+..+ ..+++|++.|++..+... .-..+|.++..++
T Consensus 359 ~~~~~~---~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~ 396 (723)
T 1xfd_A 359 WDVTKI---LAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN 396 (723)
T ss_dssp SCEEEE---EEEETTTTEEEEEESSSCTTCCEEEEECSSTT
T ss_pred eEEEee---eEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC
Confidence 112111 135678888877654421 2246777766543
No 216
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.28 E-value=6.8e-11 Score=127.40 Aligned_cols=122 Identities=13% Similarity=0.140 Sum_probs=93.6
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHC---------CeEEEEEcCCCCCCCCCccc
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDR---------GWVVAFADVRGGGGGGKKWH 544 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~---------Gy~v~~~d~RG~g~~G~~~~ 544 (728)
..||..|++....+.+ +..|.||++||.+++. ..|...+..|++. ||.|+++|.||+|.+...
T Consensus 74 ~i~g~~i~~~~~~~~~----~~~~plll~HG~~~s~--~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~-- 145 (388)
T 4i19_A 74 EIDGATIHFLHVRSPE----PDATPMVITHGWPGTP--VEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPL-- 145 (388)
T ss_dssp EETTEEEEEEEECCSS----TTCEEEEEECCTTCCG--GGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCC--
T ss_pred EECCeEEEEEEccCCC----CCCCeEEEECCCCCCH--HHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCC--
Confidence 3489999876554432 3357899999987754 4577777888776 999999999999965322
Q ss_pred cccccCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 545 HDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 545 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
. ....+++++.+.+..++++ ...+++.++|+|+||.+++.++.++|++++++|+..|+.
T Consensus 146 ----~-~~~~~~~~~a~~~~~l~~~--lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 146 ----K-SAGWELGRIAMAWSKLMAS--LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp ----S-SCCCCHHHHHHHHHHHHHH--TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred ----C-CCCCCHHHHHHHHHHHHHH--cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 1 1134688888888877765 233689999999999999999999999999999998643
No 217
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.27 E-value=5.3e-10 Score=130.45 Aligned_cols=211 Identities=10% Similarity=0.119 Sum_probs=138.5
Q ss_pred eeceeeCCCCCEEEEEEEcC----------------------------CCcEEEEEEEECCCCceeccCc----cceeee
Q 004839 126 EELSEVSPDHKFLAYTMYDK----------------------------DNDYFTLSVRNLNSGALCSKPQ----AVRVSN 173 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~----------------------------g~e~~~l~v~dl~tg~~~~~~~----~~~~~~ 173 (728)
...+.|||||++|||..... ++...+|+++|+++|+...+.. ...+..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 46788999999999986211 1245789999999998665542 234678
Q ss_pred EEEecCCCEEEEEEecCCCCcceeEEEECCCCCceeEEeeecCcce---EEEEEEcC--CCCEEEEEEcCCCceEEEEEe
Q 004839 174 IAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENV---YVNIRHTK--DFHFVCVHTFSTTSSKVFLIN 248 (728)
Q Consensus 174 ~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~---~~~~~~Sp--Dg~~l~~~~~~~~~~~l~~~d 248 (728)
+.|||||+.|++...+.......|++.|+.+++....+..+....+ ...+.||| ||++| +.+...+...||.+|
T Consensus 263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l-~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFI-WQSRRDGWNHLYLYD 341 (706)
T ss_dssp EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEE-EEECTTSSCEEEEEE
T ss_pred EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEE-EEEccCCccEEEEEE
Confidence 9999999999998776555556899999988732233333322221 12468999 99965 455555668899999
Q ss_pred CCCCCCCeEEeeecCCceE--EEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEe
Q 004839 249 AADPFSGLTLIWECEGLAH--CIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDF 326 (728)
Q Consensus 249 l~~~~~~~~~l~~~~~~~~--~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~ 326 (728)
..+ ...+.+......+. ..++++|+.|++..+.++. ....|+.++.+ . +..+.+ ... ..+..+.+
T Consensus 342 ~~~--~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~----~~~~l~~~d~~-~---~~~~~l-~~~--~~~~~~~~ 408 (706)
T 2z3z_A 342 TTG--RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASP----LERHFYCIDIK-G---GKTKDL-TPE--SGMHRTQL 408 (706)
T ss_dssp TTS--CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCT----TCBEEEEEETT-C---CCCEES-CCS--SSEEEEEE
T ss_pred CCC--CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCC----ceEEEEEEEcC-C---CCceec-cCC--CceEEEEE
Confidence 765 44566655443333 4678999999998876432 13679998876 2 334433 222 23445555
Q ss_pred e--CCEEEEEEecCCe-eEEEEEecCC
Q 004839 327 C--KTHMALILREGRT-YRLCSVSLPL 350 (728)
Q Consensus 327 ~--~~~lv~~~~~~g~-~~l~~~~l~~ 350 (728)
. ++.+++....... .+++++++.+
T Consensus 409 spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 409 SPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp CTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred CCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 4 4567666554433 5688888764
No 218
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.27 E-value=8.6e-11 Score=137.47 Aligned_cols=268 Identities=9% Similarity=0.068 Sum_probs=152.5
Q ss_pred CCcEEEeecccccccCCceEEeeceeeCCCCCEEEEEEEcCC----CcEEEEEEEECCCCce---eccCccceeeeEEEe
Q 004839 105 KIEQKLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKD----NDYFTLSVRNLNSGAL---CSKPQAVRVSNIAWA 177 (728)
Q Consensus 105 ~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG~~lA~~~~~~g----~e~~~l~v~dl~tg~~---~~~~~~~~~~~~~Ws 177 (728)
+..+.+++.....+. .+..++|||||++|||..+..+ +...+|+++|+++|+. ..+ ......++||
T Consensus 46 g~~~~~~~~~~~~~~-----~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l--~~~~~~~~~S 118 (719)
T 1z68_A 46 GQSYTILSNRTMKSV-----NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL--PRPIQYLCWS 118 (719)
T ss_dssp CCEEEEECHHHHHTT-----TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC--CSSBCCEEEC
T ss_pred CcEEEEEcccccccc-----ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec--CcccccceEC
Confidence 445566665433210 2557789999999999976432 2246899999999987 333 2456789999
Q ss_pred cCCCEEEEEEecCCCCcceeEEEECCCCCceeEEeeecCcce----------------EEEEEEcCCCCEEEEEEcCC--
Q 004839 178 KDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENV----------------YVNIRHTKDFHFVCVHTFST-- 239 (728)
Q Consensus 178 pDg~~l~y~~~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~----------------~~~~~~SpDg~~l~~~~~~~-- 239 (728)
|||+.|+|+. + ..|++.++.++....+......... ...+.|||||++|++.+.+.
T Consensus 119 PDG~~la~~~-~-----~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~ 192 (719)
T 1z68_A 119 PVGSKLAYVY-Q-----NNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTD 192 (719)
T ss_dssp SSTTCEEEEE-T-----TEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTT
T ss_pred CCCCEEEEEE-C-----CeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCC
Confidence 9999999984 2 3799999987653333222111100 12589999999999987542
Q ss_pred -----------------------------CceEEEEEeCCCCCCC-eEEeee-----cCCc--eEEEEeecCCEEEEEEc
Q 004839 240 -----------------------------TSSKVFLINAADPFSG-LTLIWE-----CEGL--AHCIVEHHEGFLYLFTD 282 (728)
Q Consensus 240 -----------------------------~~~~l~~~dl~~~~~~-~~~l~~-----~~~~--~~~~~~~dg~~l~~~tn 282 (728)
....|+++|++++... ...+.. .... ....+++|++.++...+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~ 272 (719)
T 1z68_A 193 IPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK 272 (719)
T ss_dssp SCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE
T ss_pred CceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec
Confidence 1247899999873210 012221 1111 22356788543443334
Q ss_pred CCccCCCCCceEEEEee----CCCCCCCCCCeEEee---cCCCceEE-----E--EEeeCCEEEE-EEecCCeeEEEEEe
Q 004839 283 AAKEGQEADNHYLLRCP----VDASFPSRTWESVFI---DDQGLVVE-----D--VDFCKTHMAL-ILREGRTYRLCSVS 347 (728)
Q Consensus 283 ~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~li~---~~~~~~i~-----~--~~~~~~~lv~-~~~~~g~~~l~~~~ 347 (728)
.... ...|+.++ ++ .++...++. ...+..+. . +...++.+++ ....+|..+|++++
T Consensus 273 ~~~~-----~~~l~~~d~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~ 343 (719)
T 1z68_A 273 RVQN-----VSVLSICDFREDWQ----TWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIK 343 (719)
T ss_dssp SSTT-----EEEEEEEEECSSSS----SEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEES
T ss_pred cccC-----eEEEEEEcccCCCC----CCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEE
Confidence 4321 36788887 54 122333331 11111121 2 3333456665 45567888999999
Q ss_pred cCCCCCCcceeecccccccccCCC-ceeeeecCCCccCCCcEEEEEEcc---CCCCceEEEEECCCC
Q 004839 348 LPLPAGKGVVHLKELHPHFLPLPK-YVSQIVPGPNYDYYSSTMRFAISS---PVMPDAVVDYDLSYG 410 (728)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~~p~-~~~~i~~~~~~~~~~~~~~~~~ss---~~~p~~~~~~~~~~~ 410 (728)
+.+++ ...+.-.. .+..+. .. +++.+.|..+. ...-..+|.++..++
T Consensus 344 ~~~~~-----------~~~lt~~~~~v~~~~----~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 344 DTVEN-----------AIQITSGKWEAINIF----RV-TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp SCSTT-----------CEECSCSSSCEEEEE----EE-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred CCCCc-----------eEecccCceEEEEEE----EE-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 76532 11121111 122222 12 67777776643 123357888888655
No 219
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.26 E-value=9.9e-12 Score=129.07 Aligned_cols=148 Identities=8% Similarity=-0.047 Sum_probs=94.2
Q ss_pred CCCCCCcEEEEEeCccHHHHHHHHHhCCCcee-EEEEeCCcccchhhccCCCCCCCcccccc-cCCCCCHHH-HHHHHcc
Q 004839 570 EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFR-AVVLEVPFLDATNTLLYPILPLIAADYEE-FGYPGDIDD-FHAIRNY 646 (728)
Q Consensus 570 ~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~-a~v~~~p~~d~~~~~~~~~~~~~~~~~~~-~g~p~~~~~-~~~~~~~ 646 (728)
..+|++||+|+|+|+||+|++.++..+|++|+ ++++.++....... . .. ....... ++.+...+. .+.+..
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~--~-~~--~~~~~~~~~~~~~~~~~~~~~~~~- 79 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCAR--N-QY--YTSCMYNGYPSITTPTANMKSWSG- 79 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTS--S-SC--GGGGSTTCCCCCHHHHHHHHHHBT-
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccc--h-HH--HHHHhhccCCCCCCHHHHHHHhhc-
Confidence 45799999999999999999999999999999 87776653211100 0 00 0000000 111111112 122222
Q ss_pred CcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEE--EcCCCCCCCc-hh--h-----------
Q 004839 647 SPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEEN-RY--L----------- 710 (728)
Q Consensus 647 sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~-~~--~----------- 710 (728)
+++..+.+....|+||+||..|++||+.++++++++|++.+.. ..+.+ ++++||++.. .. .
T Consensus 80 ~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~---~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~py 156 (318)
T 2d81_A 80 NQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNS---ANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPY 156 (318)
T ss_dssp TTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCG---GGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTC
T ss_pred ccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCC---cceEEEEeCCCCCCCccCCcccCccccccCCCCc
Confidence 5555554312358999999999999999999999999987721 23444 7899998644 22 0
Q ss_pred ----hHHHHHHHHHHHHHhh
Q 004839 711 ----QCKESALETAFLIKMM 726 (728)
Q Consensus 711 ----~~~~~~~~~afl~~~l 726 (728)
.++....++.||...|
T Consensus 157 i~~~~~d~~~~i~~ff~g~~ 176 (318)
T 2d81_A 157 ISNCNYDGAGAALKWIYGSL 176 (318)
T ss_dssp EEECSSCHHHHHHHHHHSSC
T ss_pred ccCCCChHHHHHHHHHhccC
Confidence 3566667888886543
No 220
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.24 E-value=3.2e-12 Score=142.71 Aligned_cols=223 Identities=13% Similarity=0.056 Sum_probs=129.6
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCC-CcCcccHHHHHHH-HHCCeEEEEEcCCCCC-CCCCccccccccC
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGE-LLDKRWRSELKSL-LDRGWVVAFADVRGGG-GGGKKWHHDGRRT 550 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~l-~~~Gy~v~~~d~RG~g-~~G~~~~~~~~~~ 550 (728)
+.|. +...++.|.+...+++.|+||++|||... .....|....... ..+|++|+.+|||.+. ||+..-..... .
T Consensus 82 ~edc--l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~-~ 158 (522)
T 1ukc_A 82 SEDC--LFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQN-G 158 (522)
T ss_dssp ESCC--CEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHS-S
T ss_pred CCcC--CEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhcccc-C
Confidence 4555 44556778765445678999999997432 1222333322222 2569999999999432 33322111000 1
Q ss_pred CCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhC----CCceeEEEEeCCcccchhhccCCCCCC
Q 004839 551 KKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCC----PDLFRAVVLEVPFLDATNTLLYPILPL 623 (728)
Q Consensus 551 ~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~----p~~f~a~v~~~p~~d~~~~~~~~~~~~ 623 (728)
.+...+.|.+++++|+.++- ..||+||.|+|+|+||++++.++... +.+|+++|+.+|........ .....
T Consensus 159 ~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~~--~~~~~ 236 (522)
T 1ukc_A 159 DLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTV--SEMEF 236 (522)
T ss_dssp CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCCS--GGGHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCCH--HHHHH
Confidence 22346899999999998752 35999999999999999988877653 67999999999975432110 00000
Q ss_pred Ccccc-cccCCCCCHHHHHHHHccCccccccc--------CCCCC--eEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCC
Q 004839 624 IAADY-EEFGYPGDIDDFHAIRNYSPYDNIQK--------DVLYP--AVLVTSSFNTRFGVWEAAKWVARVRESTIYDPK 692 (728)
Q Consensus 624 ~~~~~-~~~g~p~~~~~~~~~~~~sP~~~i~~--------~~~~P--~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~ 692 (728)
....+ ...|-....+..+.+++.++...+.. ....| .+.++.-.|..+.+.++.++.++.+..+
T Consensus 237 ~~~~~~~~~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g~~~~----- 311 (522)
T 1ukc_A 237 QFERFVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGNFIK----- 311 (522)
T ss_dssp HHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHTCSCC-----
T ss_pred HHHHHHHHcCCCCHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCcccCCCHHHHHhcCCCCC-----
Confidence 00001 11232211123444444433211110 01223 3445556776677778888877766555
Q ss_pred ccEEE--EcCCCCCCC
Q 004839 693 RPILL--NLTTDIVEE 706 (728)
Q Consensus 693 ~~~~~--~~~~gH~~~ 706 (728)
.++++ ..++||.+.
T Consensus 312 vp~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 312 VPVLVGDDTDEGSNFA 327 (522)
T ss_dssp CCEEEEEETBGGGGTS
T ss_pred CCEEEEeecchhHHhh
Confidence 46676 778999865
No 221
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.21 E-value=1.8e-09 Score=111.58 Aligned_cols=182 Identities=10% Similarity=0.032 Sum_probs=125.0
Q ss_pred eeCCCCCEEEEEE-EcCCCcEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCce
Q 004839 130 EVSPDHKFLAYTM-YDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDED 208 (728)
Q Consensus 130 ~~SPDG~~lA~~~-~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~~ 208 (728)
.|||+|++|+|+. +..+ ...||.+++++.+...++.... ..|++||+.|||+.. ...+||+.++..+..
T Consensus 110 ~~s~~g~~Iy~~~~~~~~--~~~Iy~~~~dGs~~~~lt~~~~---~~~~~~g~~iy~t~~----g~~~Iy~~~l~g~~~- 179 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQT--ATSLYRIRIDGEEKKKIKNHYL---FTCNTSDRYFYYNNP----KNGQLYRYDTASQSE- 179 (302)
T ss_dssp EEEEETTEEEEEEESSSS--CEEEEEEETTSCCCEEEESSCC---CCSEEETTEEEEECT----TTCCEEEEETTTTEE-
T ss_pred EEEEeCCEEEEEeecCCC--CceEEEEECCCCCeEEEeCCCc---eEeeEECCEEEEEeC----CCceEEEEECCCCCE-
Confidence 4899999999985 1233 3679999999877665543222 456789999999843 234899999977643
Q ss_pred eEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCCEEEEEEcCCccCC
Q 004839 209 ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKEGQ 288 (728)
Q Consensus 209 ~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~~~ 288 (728)
++++.+ . .+. + ++|+|++|+++..... ..|+++++++ ...+.|+... ...++++++.||+.++...
T Consensus 180 ~~l~~~--~-~~~-~-~~P~g~~iy~t~~~~~-~~I~~~~ldG--~~~~~Lt~~~---~~~~~~~g~~Iy~~~~~~~--- 245 (302)
T 3s25_A 180 ALFYDC--N-CYK-P-VVLDDTNVYYMDVNRD-NAIVHVNINN--PNPVVLTEAN---IEHYNVYGSLIFYQRGGDN--- 245 (302)
T ss_dssp EEEECS--C-EEE-E-EEEETTEEEEEEGGGT-TEEEEECSSS--CCCEECSCSC---EEEEEEETTEEEEEECSSS---
T ss_pred EEEeCC--C-ccc-e-eeecCCEEEEEEcCCC-cEEEEEECCC--CCeEEEeCCC---cceEEECCCEEEEEECCCC---
Confidence 344432 2 222 2 5699999999876543 7899999987 4456665322 2457899999998766543
Q ss_pred CCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecC
Q 004839 289 EADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLP 349 (728)
Q Consensus 289 ~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 349 (728)
..|++++++ . ..-+.|. .. .+..+.+++++|++.....+. |+++.++
T Consensus 246 ----~~i~~~~~D-G---~~r~~l~-~~---~~~~i~i~~d~Iy~td~~~~~--i~~~~~d 292 (302)
T 3s25_A 246 ----PALCVVKND-G---TGFKELA-KG---EFCNINVTSQYVYFTDFVSNK--EYCTSTQ 292 (302)
T ss_dssp ----CEEEEEETT-S---CCCEEEE-ES---CEEEEEECSSEEEEEETTTCC--EEEEESS
T ss_pred ----cEEEEEECC-C---CccEEee-CC---ccceEEEeCCEEEEEECCCCe--EEEEECC
Confidence 469999887 2 2234443 32 245788999999999866553 7777754
No 222
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.20 E-value=3.1e-09 Score=108.31 Aligned_cols=234 Identities=9% Similarity=-0.010 Sum_probs=147.7
Q ss_pred cEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCC-CCceeEEeeecCcceEEEEEE
Q 004839 148 DYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS-TDEDALLLEESNENVYVNIRH 225 (728)
Q Consensus 148 e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t-~~~~~lv~~~~~~~~~~~~~~ 225 (728)
...+|+++|+.+++...+.. ...+..++|+|||+.|++.. + ..|+++++.+ +... .+...........+.|
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~-----~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-E-----GLLYRLSLAGDPSPE-KVDTGFATICNNDHGI 92 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-T-----TEEEEEESSSCCSCE-ECCCTTCCCBCSCCEE
T ss_pred cceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-C-----CeEEEEeCCCCCCce-EeccccccccccceEE
Confidence 35679999999998765443 44678899999999998864 2 3799999988 6432 2332222122334789
Q ss_pred cCCCCEEEEEEcCC-CceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCC
Q 004839 226 TKDFHFVCVHTFST-TSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASF 304 (728)
Q Consensus 226 SpDg~~l~~~~~~~-~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~ 304 (728)
||||++|++..... ....||.+++.+ +..+.+..........++++|+.|++....++ ..+|+.++.. .
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~l~~~~~~-~- 162 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTG--GTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQ------VFDIYSMDID-S- 162 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTC--CCCEECCSSSSEEEEEECTTSSEEEEEEEETT------EEEEEEEETT-T-
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCC--CceEEeecCCCccceEECCCCCEEEEEECCCC------ceEEEEEECC-C-
Confidence 99999999887543 357899999977 34555554443333467789998887766543 3678888765 1
Q ss_pred CCCCCeEEeecCCCceEEEEEeeC--CEEEEEEecCCeeEEEEEecCCCCCCcceeecccccccccCCC-ceeeeecCCC
Q 004839 305 PSRTWESVFIDDQGLVVEDVDFCK--THMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPK-YVSQIVPGPN 381 (728)
Q Consensus 305 ~~~~~~~li~~~~~~~i~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~-~~~~i~~~~~ 381 (728)
.....+... ...+..+.+.. +.|++....++..+|+.+++..+. + ..+.... .+.. ..
T Consensus 163 --~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~------~-----~~~~~~~~~~~~----~~ 223 (297)
T 2ojh_A 163 --GVETRLTHG--EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSS------V-----ERITDSAYGDWF----PH 223 (297)
T ss_dssp --CCEEECCCS--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC------E-----EECCCCSEEEEE----EE
T ss_pred --CcceEcccC--CCccccceECCCCCEEEEEecCCCCccEEEECCCCCC------c-----EEEecCCcccCC----eE
Confidence 223333222 23456666653 567766666788888888765322 1 1121111 1221 23
Q ss_pred ccCCCcEEEEEEccCC-------CCceEEEEECCCCeEEEEEe
Q 004839 382 YDYYSSTMRFAISSPV-------MPDAVVDYDLSYGKWNIIQQ 417 (728)
Q Consensus 382 ~~~~~~~~~~~~ss~~-------~p~~~~~~~~~~~~~~~l~~ 417 (728)
+++++..+++...... ....++.+|+.+++.+.+..
T Consensus 224 ~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 224 PSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp ECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred ECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 4567777776655432 23579999998887665543
No 223
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.18 E-value=2.6e-10 Score=116.81 Aligned_cols=117 Identities=11% Similarity=0.077 Sum_probs=84.9
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.+|.++++.. .+.+ ...|.||++||...+. ..|......|+ ++|.|+.+|.||+|.+... ....
T Consensus 11 ~~g~~l~y~~-~~~G----~~~p~vvllHG~~~~~--~~w~~~~~~L~-~~~rvia~DlrGhG~S~~~--------~~~~ 74 (276)
T 2wj6_A 11 VFDNKLSYID-NQRD----TDGPAILLLPGWCHDH--RVYKYLIQELD-ADFRVIVPNWRGHGLSPSE--------VPDF 74 (276)
T ss_dssp ETTEEEEEEE-CCCC----CSSCEEEEECCTTCCG--GGGHHHHHHHT-TTSCEEEECCTTCSSSCCC--------CCCC
T ss_pred eCCeEEEEEE-ecCC----CCCCeEEEECCCCCcH--HHHHHHHHHHh-cCCEEEEeCCCCCCCCCCC--------CCCC
Confidence 4787776532 1112 1237899999976543 46777777776 5799999999999976322 1224
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC-CCceeEEEEeCCc
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC-PDLFRAVVLEVPF 609 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-p~~f~a~v~~~p~ 609 (728)
+++++.+.+..++++- +-+++.++||||||.+++.++.++ |++++++|+..+.
T Consensus 75 ~~~~~a~dl~~ll~~l--~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~ 128 (276)
T 2wj6_A 75 GYQEQVKDALEILDQL--GVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWL 128 (276)
T ss_dssp CHHHHHHHHHHHHHHH--TCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCC
T ss_pred CHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEeccc
Confidence 6777777666666542 236899999999999999999999 9999999998653
No 224
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.18 E-value=7.4e-10 Score=126.16 Aligned_cols=199 Identities=11% Similarity=-0.006 Sum_probs=130.2
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-c-ceeeeEEEecCCCEEEEEEec-CCCCcceeEEEEC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-A-VRVSNIAWAKDGQALIYVVTD-QNKRPYQIYCSII 202 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~-~~~~~~~WspDg~~l~y~~~~-~~~~~~~v~~~~l 202 (728)
+..+.+||||++|||+.+.+| ..+||. +++|+..+++. . ..+..+.|||| .|+|+... ......+||.+++
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g--~~~lw~--~~~g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEG--SVNAYL--YDGGETVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETT--EEEEEE--EETTEEEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEET
T ss_pred hheeecCCCCCeEEEEEccCC--ceeEEE--EcCCCcEeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEec
Confidence 556779999999999987665 345555 57888777765 3 36778999999 57777653 3344568999998
Q ss_pred --CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCCEEEEE
Q 004839 203 --GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLF 280 (728)
Q Consensus 203 --~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~ 280 (728)
... .. .+.... .. ....|||||+.+++.+....... ++|+++ ++.+.+..... ....+++||+.+++.
T Consensus 98 ~~~g~-~~-~l~~~~-~~--~~~~~s~dg~~~~~~s~~~~~~~--l~d~~~--g~~~~l~~~~~-~~~~~spDG~~la~~ 167 (582)
T 3o4h_A 98 SRPGE-EQ-RLEAVK-PM--RILSGVDTGEAVVFTGATEDRVA--LYALDG--GGLRELARLPG-FGFVSDIRGDLIAGL 167 (582)
T ss_dssp TSTTC-CE-ECTTSC-SB--EEEEEEECSSCEEEEEECSSCEE--EEEEET--TEEEEEEEESS-CEEEEEEETTEEEEE
T ss_pred cCCCc-cc-cccCCC-Cc--eeeeeCCCCCeEEEEecCCCCce--EEEccC--CcEEEeecCCC-ceEEECCCCCEEEEE
Confidence 433 22 222111 11 13588999998888776555444 447776 45666665444 556788999999988
Q ss_pred EcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC--CEEEEEEecCCeeEEEEEecCCCC
Q 004839 281 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK--THMALILREGRTYRLCSVSLPLPA 352 (728)
Q Consensus 281 tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~~ 352 (728)
++..+. ...|+.++++ .++.+.+... ...+..+.+.. +.|+ ....++..+|+++++++++
T Consensus 168 ~~~~~~-----~~~i~~~d~~----~g~~~~l~~~--~~~~~~~~~SpDG~~l~-~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 168 GFFGGG-----RVSLFTSNLS----SGGLRVFDSG--EGSFSSASISPGMKVTA-GLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEEETT-----EEEEEEEETT----TCCCEEECCS--SCEEEEEEECTTSCEEE-EEECSSCEEEEEECTTTCC
T ss_pred EEcCCC-----CeEEEEEcCC----CCCceEeecC--CCccccceECCCCCEEE-EccCCCeeEEEEEcCCCCc
Confidence 775432 2568888876 2455655332 23345666653 4555 5566777889999987643
No 225
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.18 E-value=7.3e-09 Score=120.54 Aligned_cols=249 Identities=11% Similarity=0.012 Sum_probs=158.9
Q ss_pred eEeCCeEEEEEccCCCeeEEEEEEecCCCcccccCCCCCCCccCCCCCCCcEEEeecccccccCCceEEeeceeeCCCCC
Q 004839 57 DLHHRRLYYRRVEEGKQYLVLCRRLVSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQEAERFGGYAYEELSEVSPDHK 136 (728)
Q Consensus 57 ~~~g~~~yy~~~~~g~e~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG~ 136 (728)
+++|.++.|..+..|.+...++...... ++ . +-+. +. + .....+.|| ||+
T Consensus 137 SpDg~~lAy~~~~~G~~~~~i~v~dl~t--------------------g~-~-~~~~--~~---~--~k~~~~~Ws-Dg~ 186 (693)
T 3iuj_A 137 SRDGRILAYSLSLAGSDWREIHLMDVES--------------------KQ-P-LETP--LK---D--VKFSGISWL-GNE 186 (693)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEEEETTT--------------------CS-E-EEEE--EE---E--EESCCCEEE-TTT
T ss_pred CCCCCEEEEEEecCCCceEEEEEEECCC--------------------CC-C-Cccc--cC---C--ceeccEEEe-CCC
Confidence 4789999999998898877777765432 22 1 1111 10 1 123567899 999
Q ss_pred EEEEEEEcCC--------CcEEEEEEEECCCCce--eccCc-cc----eeeeEEEecCCCEEEEEEecCCCCcceeEEEE
Q 004839 137 FLAYTMYDKD--------NDYFTLSVRNLNSGAL--CSKPQ-AV----RVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 201 (728)
Q Consensus 137 ~lA~~~~~~g--------~e~~~l~v~dl~tg~~--~~~~~-~~----~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~ 201 (728)
.|+|+..... ....+||++++.++.. ..+.. .. ....+.|||||++|+++..... ...+||+++
T Consensus 187 ~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~~i~~~d 265 (693)
T 3iuj_A 187 GFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST-SGNRLYVKD 265 (693)
T ss_dssp EEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS-SCCEEEEEE
T ss_pred EEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC-CCcEEEEEE
Confidence 9999976532 3346799999988753 22211 22 2467899999999999876432 336899999
Q ss_pred CCCCC-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCC-ceEEEEEeCCCCCC-CeEEeeecCCceEEEEeecCCEEE
Q 004839 202 IGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT-SSKVFLINAADPFS-GLTLIWECEGLAHCIVEHHEGFLY 278 (728)
Q Consensus 202 l~t~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~l~~~dl~~~~~-~~~~l~~~~~~~~~~~~~dg~~l~ 278 (728)
+.++. .-+.+....+... .+ ++++|+.|+|.++... ...|+.+|++++.. .++.+.+...... .++++++.|+
T Consensus 266 ~~~~~~~~~~l~~~~~~~~--~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~g~~lv 341 (693)
T 3iuj_A 266 LSQENAPLLTVQGDLDADV--SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSGSGYLF 341 (693)
T ss_dssp TTSTTCCCEEEECSSSSCE--EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEETTEEE
T ss_pred CCCCCCceEEEeCCCCceE--EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEECCEEE
Confidence 98764 2223322222222 12 7889999999888654 47899999987431 2466776665555 8889999998
Q ss_pred EEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecC-CeeEEEEEecCCC
Q 004839 279 LFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREG-RTYRLCSVSLPLP 351 (728)
Q Consensus 279 ~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~-g~~~l~~~~l~~~ 351 (728)
+....++ ..+|+.++++ +.+...+.......+..+... ++.+++..... .-..++.+++.++
T Consensus 342 ~~~~~~g------~~~l~~~d~~-----g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 342 AEYMVDA------TARVEQFDYE-----GKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp EEEEETT------EEEEEEECTT-----SCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred EEEEECC------eeEEEEEECC-----CCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 8877654 2567887765 223222322222334444443 45666665543 3357888987654
No 226
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=99.14 E-value=2.2e-11 Score=136.59 Aligned_cols=225 Identities=12% Similarity=0.006 Sum_probs=126.4
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC-cCcccH--HHH-HHHHH-CCeEEEEEcCCCCCCCCCccccc-c
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL-LDKRWR--SEL-KSLLD-RGWVVAFADVRGGGGGGKKWHHD-G 547 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~--~~~-~~l~~-~Gy~v~~~d~RG~g~~G~~~~~~-~ 547 (728)
+.|...+ .++.|.....+++.|+||++|||.... ....|. ... +.++. .|++|+.+|||.+. +|...... .
T Consensus 102 sedcl~l--~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~-~gf~~~~~~~ 178 (544)
T 1thg_A 102 NEDCLYL--NVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGP-FGFLGGDAIT 178 (544)
T ss_dssp CSCCCEE--EEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHH-HHHCCSHHHH
T ss_pred CCCCeEE--EEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCc-ccCCCccccc
Confidence 5566444 567787654456789999999974322 112232 112 22332 58999999999754 11100000 0
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhC--------CCceeEEEEeCCcccchhhc
Q 004839 548 RRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCC--------PDLFRAVVLEVPFLDATNTL 616 (728)
Q Consensus 548 ~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--------p~~f~a~v~~~p~~d~~~~~ 616 (728)
....+...+.|..++++|+.++- ..||+||.|+|+|+||.+++.++... ..+|+++|+.+|........
T Consensus 179 ~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~~~~ 258 (544)
T 1thg_A 179 AEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPLPYHDS 258 (544)
T ss_dssp HHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCCCCCSSS
T ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccccccCcC
Confidence 01133346899999999998752 36999999999999999998887752 46899999999853221110
Q ss_pred cCCCCCCCcccc-cccCCCCC---HHHHHHHHccCcccccccC--------CCCC--eEEEEcCCCCCCCHHHHHHHHHH
Q 004839 617 LYPILPLIAADY-EEFGYPGD---IDDFHAIRNYSPYDNIQKD--------VLYP--AVLVTSSFNTRFGVWEAAKWVAR 682 (728)
Q Consensus 617 ~~~~~~~~~~~~-~~~g~p~~---~~~~~~~~~~sP~~~i~~~--------~~~P--~lli~g~~D~~Vp~~~~~~~~~~ 682 (728)
............ ...|-... .+..+.+++.++...+... ...+ .+......|..+.+.+..++.++
T Consensus 259 ~~~~~~~~~~~~~~~~gc~~~~~~~~~~~cLr~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~P~~Dg~~l~~~p~~~~~~ 338 (544)
T 1thg_A 259 SSVGPDISYNRFAQYAGCDTSASANDTLECLRSKSSSVLHDAQNSYDLKDLFGLLPQFLGFGPRPDGNIIPDAAYELFRS 338 (544)
T ss_dssp CCSSSSCHHHHHHHHHTCCTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHSTTTSCGGGTSCCCCCSSSSCSCHHHHHHT
T ss_pred ChHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhcCCHHHHHHhhhhcccccccccccccccceeeeCCcccCcCHHHHHhc
Confidence 000000000001 11233221 1344556655543222110 0000 01122234655666777777776
Q ss_pred HHhCCCCCCCccEEE--EcCCCCCCC
Q 004839 683 VRESTIYDPKRPILL--NLTTDIVEE 706 (728)
Q Consensus 683 L~~~~~~~~~~~~~~--~~~~gH~~~ 706 (728)
.+..+ .++++ ..++||.+.
T Consensus 339 g~~~~-----vp~l~G~~~~Eg~~f~ 359 (544)
T 1thg_A 339 GRYAK-----VPYISGNQEDEGTAFA 359 (544)
T ss_dssp TCSCC-----CCEEEEEETBTTTTTG
T ss_pred CCCCC-----ccEEEEeecCchhhhc
Confidence 65555 56777 778999764
No 227
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.12 E-value=3.8e-08 Score=105.44 Aligned_cols=242 Identities=9% Similarity=-0.004 Sum_probs=148.8
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 204 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t 204 (728)
+..+.|||||++|+++...++ .|+++|+++++.+.... ......++|+|||+.|+++..+ ...|+++|+.+
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~----~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~----~~~v~v~d~~~ 105 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSN----DVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMA----SSTLSVIDTTS 105 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGT----EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT----TTEEEEEETTT
T ss_pred cceEEECCCCCEEEEECCCCC----eEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECC----CCEEEEEECCC
Confidence 456789999999977754444 49999999998765433 3467789999999999887532 34799999987
Q ss_pred CCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-CceEEEEeecCCEEEEEEcC
Q 004839 205 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-GLAHCIVEHHEGFLYLFTDA 283 (728)
Q Consensus 205 ~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~~~~~~~~~dg~~l~~~tn~ 283 (728)
++... .+.... ....+.|+|||++|++.... ...|+++|+.+ ++........ ......++++++.+++....
T Consensus 106 ~~~~~-~~~~~~--~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 106 NTVAG-TVKTGK--SPLGLALSPDGKKLYVTNNG--DKTVSVINTVT--KAVINTVSVGRSPKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp TEEEE-EEECSS--SEEEEEECTTSSEEEEEETT--TTEEEEEETTT--TEEEEEEECCSSEEEEEECTTSSEEEEEETT
T ss_pred CeEEE-EEeCCC--CcceEEECCCCCEEEEEeCC--CCEEEEEECCC--CcEEEEEecCCCcceEEECCCCCEEEEEeCC
Confidence 64222 222222 23568899999999777653 34799999987 3333333322 22334567888887766544
Q ss_pred CccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCCCCCCcceeecc
Q 004839 284 AKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPLPAGKGVVHLKE 361 (728)
Q Consensus 284 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~ 361 (728)
+ ..|...++. . ......+.. ...+..+.+. ++.+++.....+...+.++++.+++ .+
T Consensus 179 ~--------~~v~~~d~~-~---~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~-----~~-- 237 (391)
T 1l0q_A 179 S--------MSISVIDTV-T---NSVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK-----IT-- 237 (391)
T ss_dssp T--------TEEEEEETT-T---TEEEEEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE-----EE--
T ss_pred C--------CEEEEEECC-C---CeEEEEEec--CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe-----EE--
Confidence 3 246666665 1 222223332 2345555555 3566666543345678888876532 11
Q ss_pred cccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEE
Q 004839 362 LHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWN 413 (728)
Q Consensus 362 ~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~ 413 (728)
..++.......+ .++.++..+.++.+.. ..+..+|+.+++..
T Consensus 238 ---~~~~~~~~~~~~----~~s~dg~~l~~s~~~d---~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 238 ---ARIPVGPDPAGI----AVTPDGKKVYVALSFX---NTVSVIDTATNTIT 279 (391)
T ss_dssp ---EEEECCSSEEEE----EECTTSSEEEEEETTT---TEEEEEETTTTEEE
T ss_pred ---EEEecCCCccEE----EEccCCCEEEEEcCCC---CEEEEEECCCCcEE
Confidence 122222232222 2355677676655433 58899999888754
No 228
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.11 E-value=6.3e-11 Score=133.03 Aligned_cols=132 Identities=19% Similarity=0.149 Sum_probs=93.2
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC-cCcccHHHHHHHHH-CCeEEEEEcCC-CCCCCCCccccccccC
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL-LDKRWRSELKSLLD-RGWVVAFADVR-GGGGGGKKWHHDGRRT 550 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~l~~-~Gy~v~~~d~R-G~g~~G~~~~~~~~~~ 550 (728)
+.|...+ .++.|.+...+++.|+||++|||.... ....|.. ..|++ +|++|+.+||| |..+++...... .
T Consensus 95 ~edcl~l--nv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~---~ 167 (542)
T 2h7c_A 95 SEDCLYL--NIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEH---S 167 (542)
T ss_dssp ESCCCEE--EEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTT---C
T ss_pred CCCCcEE--EEEECCCCCCCCCCCEEEEECCCcccCCCccccCH--HHHHhcCCEEEEecCCCCccccCCCCCccc---C
Confidence 4566544 467887654456799999999974321 1112322 23554 79999999999 443443322111 1
Q ss_pred CCCCcHHHHHHHHHHHHHc---CCCCCCcEEEEEeCccHHHHHHHHHh--CCCceeEEEEeCCcccc
Q 004839 551 KKLNSIKDFISCARFLIEK---EIVKEHKLAGWGYSAGGLLVAAAINC--CPDLFRAVVLEVPFLDA 612 (728)
Q Consensus 551 ~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~--~p~~f~a~v~~~p~~d~ 612 (728)
.+...+.|.+++++|+.++ -..||+||.|+|+|+||++++.++.. .+.+|+++|+.+|....
T Consensus 168 ~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~~ 234 (542)
T 2h7c_A 168 RGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALT 234 (542)
T ss_dssp CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTC
T ss_pred ccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCccC
Confidence 2334578999999999865 24699999999999999999998875 36799999999997654
No 229
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.10 E-value=2.4e-08 Score=117.16 Aligned_cols=254 Identities=11% Similarity=0.060 Sum_probs=152.4
Q ss_pred e-EeCCeEEEEEccCCCeeEEEEEEecCCCcccccCCCCCCCccCCCCCCCcEEEeecccccccCCceEEeeceeeCCCC
Q 004839 57 D-LHHRRLYYRRVEEGKQYLVLCRRLVSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQEAERFGGYAYEELSEVSPDH 135 (728)
Q Consensus 57 ~-~~g~~~yy~~~~~g~e~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG 135 (728)
+ ++|.++.|..+..|.+...+++...++ +.+ .+.+ .+. . ..+.+.|||||
T Consensus 182 S~PDG~~lAy~~~~~G~~~~~l~v~dl~~--------------------g~~-~l~~--~~~---~---~~~~~~WspDg 232 (751)
T 2xe4_A 182 APPEHDLVAFSVDMSGNEVYTIEFKRISD--------------------PSQ-TIAD--KVS---G---TNGEIVWGPDH 232 (751)
T ss_dssp CTTTTCEEEEEEESSSSSCEEEEEEETTC--------------------TTC-CCCC--CEE---E---ECSCCEECSST
T ss_pred cCCCCCEEEEEEeCCCCceEEEEEEECCC--------------------CCE-eCCc--ccc---C---ceeeEEEecCC
Confidence 5 789999999998888877787766543 201 1111 010 1 23567899999
Q ss_pred CEEEEEEEcCCCcEEEEEEEECCCCcee--ccC---ccceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCC-ce-
Q 004839 136 KFLAYTMYDKDNDYFTLSVRNLNSGALC--SKP---QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD-ED- 208 (728)
Q Consensus 136 ~~lA~~~~~~g~e~~~l~v~dl~tg~~~--~~~---~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~-~~- 208 (728)
+.|+|+.........+||++++.+++.. .+. .......+.|||||++|+|+.... ...+||++++.++. ..
T Consensus 233 ~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~--~~~~l~~~d~~~~~~~~~ 310 (751)
T 2xe4_A 233 TSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP--ETAEVHLLDLRKGNAHNT 310 (751)
T ss_dssp TEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS--SCEEEEEEESSSCTTCCC
T ss_pred CEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC--CCceEEEEECCCCCCCce
Confidence 9999997654444578999999987532 221 112345789999999999987543 35689999998763 22
Q ss_pred -eEEeeecCcceEEEEEEcCCCCEEEEEEcCC--CceEEEEEeCCCCCCCeEE-eeecCCc-eEEEEeecCCEEEEEEcC
Q 004839 209 -ALLLEESNENVYVNIRHTKDFHFVCVHTFST--TSSKVFLINAADPFSGLTL-IWECEGL-AHCIVEHHEGFLYLFTDA 283 (728)
Q Consensus 209 -~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~--~~~~l~~~dl~~~~~~~~~-l~~~~~~-~~~~~~~dg~~l~~~tn~ 283 (728)
+.+........ ..+.| .+|+.|++.++.. ...+||.+|++++ +..+. +.+.... ....++..++.|++....
T Consensus 311 ~~~l~~~~~~~~-~s~~~-~~g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~ 387 (751)
T 2xe4_A 311 LEIVRPREKGVR-YDVQM-HGTSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAVRSNYLVVAGRR 387 (751)
T ss_dssp EEESSCCCTTCC-EEEEE-ETTTEEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEECSSEEEEEEEE
T ss_pred eEEeecCCCCce-EEEee-eeCCEEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEEECCEEEEEEEe
Confidence 33332222221 11222 2388898888875 4579999999753 23343 4433332 334456678888888776
Q ss_pred CccCCCCCceEEEEeeCCC--C-CCCCC-CeEEeecCCCceEEEEE------eeCCEEEEEEecCCe-eEEEEEecCCC
Q 004839 284 AKEGQEADNHYLLRCPVDA--S-FPSRT-WESVFIDDQGLVVEDVD------FCKTHMALILREGRT-YRLCSVSLPLP 351 (728)
Q Consensus 284 ~~~~~~~~~~~l~~~~~~~--~-~~~~~-~~~li~~~~~~~i~~~~------~~~~~lv~~~~~~g~-~~l~~~~l~~~ 351 (728)
++ ..+|+.+++.. . ...+. .+.+..++. ....++. ..++.+++....-.. +.++.+++.++
T Consensus 388 ~g------~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~-~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~ 459 (751)
T 2xe4_A 388 AG------LTRIWTMMADSQDGVFKAGTGLREVVMEEP-IFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDH 459 (751)
T ss_dssp TT------EEEEEEEECCTTTSCCCTTTCCEECCCCCS-SCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTC
T ss_pred CC------EEEEEEEecccccccccCCccceEECCCCc-eeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 54 35677777510 0 01122 344422222 2233442 234566666555444 57888887654
No 230
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.10 E-value=1.2e-07 Score=101.61 Aligned_cols=198 Identities=13% Similarity=0.039 Sum_probs=123.5
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
.+..+.|||||++|+++...++ .|+++|+++++.+.... ......++|+|||+.|+++... ...|+++|+.
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~----~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----~~~v~~~d~~ 146 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASS----TLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG----DKTVSVINTV 146 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTT----EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT----TTEEEEEETT
T ss_pred CccceEECCCCCEEEEEECCCC----EEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCC----CCEEEEEECC
Confidence 3567789999999988753333 49999999998665433 3456789999999999887532 3479999998
Q ss_pred CCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCc-eEEEEeecCCEEEEEEc
Q 004839 204 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL-AHCIVEHHEGFLYLFTD 282 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~-~~~~~~~dg~~l~~~tn 282 (728)
+++... .+..... ...+.++|||++|++..... ..|+++|+.+ ++.......... ....++++|+.|++...
T Consensus 147 ~~~~~~-~~~~~~~--~~~~~~~~dg~~l~~~~~~~--~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 147 TKAVIN-TVSVGRS--PKGIAVTPDGTKVYVANFDS--MSISVIDTVT--NSVIDTVKVEAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp TTEEEE-EEECCSS--EEEEEECTTSSEEEEEETTT--TEEEEEETTT--TEEEEEEECSSEEEEEEECTTSSEEEEEEE
T ss_pred CCcEEE-EEecCCC--cceEEECCCCCEEEEEeCCC--CEEEEEECCC--CeEEEEEecCCCccceEECCCCCEEEEEec
Confidence 765222 2222221 24678999999987765533 4699999987 333333333222 22355678888887764
Q ss_pred CCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCCC
Q 004839 283 AAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 283 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
... +..|...++. . .+....+... ..+..+.+. ++.|++....++ .+.++++.++
T Consensus 220 ~~~------~~~v~~~d~~-~---~~~~~~~~~~--~~~~~~~~s~dg~~l~~s~~~d~--~v~v~d~~~~ 276 (391)
T 1l0q_A 220 DKY------FNTVSMIDTG-T---NKITARIPVG--PDPAGIAVTPDGKKVYVALSFXN--TVSVIDTATN 276 (391)
T ss_dssp CSS------CCEEEEEETT-T---TEEEEEEECC--SSEEEEEECTTSSEEEEEETTTT--EEEEEETTTT
T ss_pred CcC------CCcEEEEECC-C---CeEEEEEecC--CCccEEEEccCCCEEEEEcCCCC--EEEEEECCCC
Confidence 211 2346666665 2 2222223322 235556555 456766665554 5667777653
No 231
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.07 E-value=2.4e-09 Score=107.35 Aligned_cols=211 Identities=13% Similarity=0.012 Sum_probs=126.8
Q ss_pred cEEEEEcCCCCCCcCcccHHHHHHHHHCCe--EEEEEcCCCCCCC---CCccc-------cccccCCCCC----cHHHHH
Q 004839 497 PGLLHGHGAYGELLDKRWRSELKSLLDRGW--VVAFADVRGGGGG---GKKWH-------HDGRRTKKLN----SIKDFI 560 (728)
Q Consensus 497 P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy--~v~~~d~RG~g~~---G~~~~-------~~~~~~~~~~----~~~D~~ 560 (728)
+.||++||..+.. ..|...+..|.++|| .|+.+|+++.|.. |.--. +-+....... ..+++.
T Consensus 7 ~pvvliHG~~~~~--~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l~ 84 (249)
T 3fle_A 7 TATLFLHGYGGSE--RSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWIK 84 (249)
T ss_dssp EEEEEECCTTCCG--GGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHHH
T ss_pred CcEEEECCCCCCh--hHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHHH
Confidence 5678899965533 568888999999997 5888888877631 21100 0000111111 245666
Q ss_pred HHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCC-----ceeEEEEeCCcccchhhccCCCCCCCcccccccCCCC
Q 004839 561 SCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPD-----LFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPG 635 (728)
Q Consensus 561 ~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~-----~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p~ 635 (728)
+++++|.++- ..+++.++||||||.+++.++.++|+ +++.+|+.++..+-...+..+. ....+...|.|.
T Consensus 85 ~~i~~l~~~~--~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~---~~~~~~~~g~p~ 159 (249)
T 3fle_A 85 EVLSQLKSQF--GIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENV---NEIIVDKQGKPS 159 (249)
T ss_dssp HHHHHHHHTT--CCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCT---TTSCBCTTCCBS
T ss_pred HHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCc---chhhhcccCCCc
Confidence 7778877653 33689999999999999999988874 7899998887665443221111 111122335453
Q ss_pred C-HHHHHHHHccCcccccccCCCCCeEEEEcC------CCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEc--CCCCCCC
Q 004839 636 D-IDDFHAIRNYSPYDNIQKDVLYPAVLVTSS------FNTRFGVWEAAKWVARVRESTIYDPKRPILLNL--TTDIVEE 706 (728)
Q Consensus 636 ~-~~~~~~~~~~sP~~~i~~~~~~P~lli~g~------~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~--~~gH~~~ 706 (728)
. ...++.+.+. ...+.+ .+.|+|.|+|. .|..||...++.+...++..... -+.+. +. ++.|...
T Consensus 160 ~~~~~~~~l~~~--~~~~p~-~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~--y~e~~-v~g~~a~Hs~l 233 (249)
T 3fle_A 160 RMNAAYRQLLSL--YKIYCG-KEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKS--YQEMK-FKGAKAQHSQL 233 (249)
T ss_dssp SCCHHHHHTGGG--HHHHTT-TTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSE--EEEEE-EESGGGSTGGG
T ss_pred ccCHHHHHHHHH--HhhCCc-cCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCc--eEEEE-EeCCCCchhcc
Confidence 2 2334444333 222332 46789999998 68999999998887777765422 12222 44 4889754
Q ss_pred chhhhHHHHHHHHHHH
Q 004839 707 NRYLQCKESALETAFL 722 (728)
Q Consensus 707 ~~~~~~~~~~~~~afl 722 (728)
-....+ ...+..||
T Consensus 234 ~~n~~V--~~~I~~FL 247 (249)
T 3fle_A 234 HENKDV--ANEIIQFL 247 (249)
T ss_dssp GGCHHH--HHHHHHHH
T ss_pred ccCHHH--HHHHHHHh
Confidence 422222 23344665
No 232
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.06 E-value=1.4e-09 Score=109.89 Aligned_cols=210 Identities=11% Similarity=-0.012 Sum_probs=119.5
Q ss_pred cEEEEEcCCCCCCcCcccHHHHHHHHHCCeE---EEEEcCCCCCC----------CCCccccccccCCCCCcH----HHH
Q 004839 497 PGLLHGHGAYGELLDKRWRSELKSLLDRGWV---VAFADVRGGGG----------GGKKWHHDGRRTKKLNSI----KDF 559 (728)
Q Consensus 497 P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~---v~~~d~RG~g~----------~G~~~~~~~~~~~~~~~~----~D~ 559 (728)
|.||++||..+.. ..|...+..|+++|+. |+.+++++.|. .+......+... ....+ +|+
T Consensus 4 ~pvvllHG~~~~~--~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~-~~~~~~~~a~~l 80 (254)
T 3ds8_A 4 IPIILIHGSGGNA--SSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQ-NQATPDDWSKWL 80 (254)
T ss_dssp CCEEEECCTTCCT--TTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESS-TTSCHHHHHHHH
T ss_pred CCEEEECCCCCCc--chHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecC-CCCCHHHHHHHH
Confidence 4467899965543 4588888999998764 44444333331 111100000001 11233 444
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCC-----ceeEEEEeCCcccchhhccCCCCCCCcccccccCCC
Q 004839 560 ISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPD-----LFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYP 634 (728)
Q Consensus 560 ~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~-----~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~p 634 (728)
.++++.+.++..+ +++.++||||||.+++.++.++|+ +++++|+.++..+........ . .....+.|
T Consensus 81 ~~~i~~l~~~~~~--~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~-~-----~~~~~~~p 152 (254)
T 3ds8_A 81 KIAMEDLKSRYGF--TQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNG-M-----DLSFKKLP 152 (254)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHC-S-----CTTCSSCS
T ss_pred HHHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccc-c-----ccccccCC
Confidence 4555777655322 689999999999999999999998 899999999876654321110 0 01111333
Q ss_pred CCHHHHHHHHccCcccccccCCCCCeEEEEcC------CCCCCCHHHHHHHHHHHHhCCCCCCCccEEE-EcCCCCCCCc
Q 004839 635 GDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSS------FNTRFGVWEAAKWVARVRESTIYDPKRPILL-NLTTDIVEEN 707 (728)
Q Consensus 635 ~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~------~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~-~~~~gH~~~~ 707 (728)
.....+..+... ...+. .+.|+++|+|. .|..||+..+..+...++..... ...+.+ -.+++|...-
T Consensus 153 ~~~~~~~~~~~~--~~~~~--~~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~--~~~~~~~g~~a~Hs~l~ 226 (254)
T 3ds8_A 153 NSTPQMDYFIKN--QTEVS--PDLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKA--YIEDIQVGEDAVHQTLH 226 (254)
T ss_dssp SCCHHHHHHHHT--GGGSC--TTCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSE--EEEEEEESGGGCGGGGG
T ss_pred cchHHHHHHHHH--HhhCC--CCcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcc--eEEEEEeCCCCchhccc
Confidence 322222222211 12222 26789999999 89999999999887777654311 012222 2346787544
Q ss_pred hhhhHHHHHHHHHHHHHh
Q 004839 708 RYLQCKESALETAFLIKM 725 (728)
Q Consensus 708 ~~~~~~~~~~~~afl~~~ 725 (728)
.... .......||.+.
T Consensus 227 ~~~~--v~~~i~~fL~~~ 242 (254)
T 3ds8_A 227 ETPK--SIEKTYWFLEKF 242 (254)
T ss_dssp GSHH--HHHHHHHHHHTC
T ss_pred CCHH--HHHHHHHHHHHh
Confidence 2112 344456777654
No 233
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.05 E-value=1.1e-07 Score=116.18 Aligned_cols=152 Identities=10% Similarity=-0.013 Sum_probs=99.0
Q ss_pred EeeceeeCCCCCEEEEEEEcC-CCcEEEEEEEECCCCceeccCc-ccee-------eeEEEecCCCEEEEEEecCCC--C
Q 004839 125 YEELSEVSPDHKFLAYTMYDK-DNDYFTLSVRNLNSGALCSKPQ-AVRV-------SNIAWAKDGQALIYVVTDQNK--R 193 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~-g~e~~~l~v~dl~tg~~~~~~~-~~~~-------~~~~WspDg~~l~y~~~~~~~--~ 193 (728)
.+..++|||||++|||..... .....+|+++|+++|+...++. .... ..++|||||+ |+|+...... .
T Consensus 54 ~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~ 132 (1045)
T 1k32_A 54 VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSS 132 (1045)
T ss_dssp EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSSSTT
T ss_pred cccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCcccccccccccccCCCCCE-EEEEECCcCCCcc
Confidence 577889999999999987651 1235789999999998777665 3344 7899999999 8887653211 2
Q ss_pred cceeEEEECCCCCceeEEeee-----------------------------------------------cCcceEEEEEEc
Q 004839 194 PYQIYCSIIGSTDEDALLLEE-----------------------------------------------SNENVYVNIRHT 226 (728)
Q Consensus 194 ~~~v~~~~l~t~~~~~lv~~~-----------------------------------------------~~~~~~~~~~~S 226 (728)
..+||.+++.++....+.... ........+.|+
T Consensus 133 ~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s 212 (1045)
T 1k32_A 133 MTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIV 212 (1045)
T ss_dssp CCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEE
T ss_pred cceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEe
Confidence 347998887654311111000 000011245677
Q ss_pred CCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCCEEEEEE
Q 004839 227 KDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFT 281 (728)
Q Consensus 227 pDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~t 281 (728)
+| .+++.+.......||.+++++ +..+.+..........+++||+.+++..
T Consensus 213 ~d--~l~~~~~~dg~~~l~~~~~~g--~~~~~l~~~~~~~~~~~SpDG~~la~~~ 263 (1045)
T 1k32_A 213 GH--RIYFITDIDGFGQIYSTDLDG--KDLRKHTSFTDYYPRHLNTDGRRILFSK 263 (1045)
T ss_dssp TT--EEEEEECTTSSCEEEEEETTS--CSCEECCCCCSSCEEEEEESSSCEEEEE
T ss_pred CC--EEEEEEeccCceEEEEEeCCC--CcceEecCCCCcceeeEcCCCCEEEEEe
Confidence 66 666766666667899999876 3455665444333457789999887763
No 234
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.04 E-value=3.5e-10 Score=125.56 Aligned_cols=131 Identities=21% Similarity=0.204 Sum_probs=91.8
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCC---CCCcCcccHHHHHHHHHCC-eEEEEEcCC----CCCCCCCcccc
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAY---GELLDKRWRSELKSLLDRG-WVVAFADVR----GGGGGGKKWHH 545 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~---~~~~~~~~~~~~~~l~~~G-y~v~~~d~R----G~g~~G~~~~~ 545 (728)
+.|+..+. ++.|+. ..++.|+||++|||. ++.... ......|+++| ++|+.+||| |.+..+....+
T Consensus 81 ~edcl~l~--v~~P~~--~~~~~Pviv~iHGGg~~~g~~~~~--~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~ 154 (498)
T 2ogt_A 81 SEDGLYLN--IWSPAA--DGKKRPVLFWIHGGAFLFGSGSSP--WYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGE 154 (498)
T ss_dssp BSCCCEEE--EEESCS--SSCCEEEEEEECCSTTTSCCTTCG--GGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCG
T ss_pred CCCCcEEE--EEecCC--CCCCCcEEEEEcCCccCCCCCCCC--cCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccc
Confidence 56665554 567763 346789999999985 322222 22346788876 999999999 44433221100
Q ss_pred ccccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhC--CCceeEEEEeCCccc
Q 004839 546 DGRRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCC--PDLFRAVVLEVPFLD 611 (728)
Q Consensus 546 ~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--p~~f~a~v~~~p~~d 611 (728)
.....+...+.|.+++++|+.++- ..||+||.|+|+|+||.+++.++... ..+|+++|+.+|..+
T Consensus 155 -~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 155 -AYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp -GGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred -cccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 011223346899999999998752 36999999999999999999888742 468999999999765
No 235
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=99.02 E-value=6.7e-11 Score=132.36 Aligned_cols=133 Identities=19% Similarity=0.157 Sum_probs=88.4
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC-cCcccH--HHH-HHHH-HCCeEEEEEcCCCCC-CCCCcccccc
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL-LDKRWR--SEL-KSLL-DRGWVVAFADVRGGG-GGGKKWHHDG 547 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~--~~~-~~l~-~~Gy~v~~~d~RG~g-~~G~~~~~~~ 547 (728)
+.|.. ...++.|+....+++.|+||++|||.... ....+. ... ..++ ..|++|+.+|||.+. ++... .+..
T Consensus 94 sedcl--~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~-~~~~ 170 (534)
T 1llf_A 94 SEDCL--TINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAG-DDIK 170 (534)
T ss_dssp CSCCC--EEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCS-HHHH
T ss_pred CCCCe--EEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCc-cccc
Confidence 45554 44567887644456789999999974322 111222 111 2222 369999999999654 22110 0000
Q ss_pred ccCCCCCcHHHHHHHHHHHHHc---CCCCCCcEEEEEeCccHHHHHHHHHhC--------CCceeEEEEeCCc
Q 004839 548 RRTKKLNSIKDFISCARFLIEK---EIVKEHKLAGWGYSAGGLLVAAAINCC--------PDLFRAVVLEVPF 609 (728)
Q Consensus 548 ~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~~~~~~~~~~--------p~~f~a~v~~~p~ 609 (728)
....+...+.|..++++|+.++ -..||+||.|+|+|+||.+++.++... +.+|+++|+.+|.
T Consensus 171 ~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 171 AEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 0123345689999999999875 236999999999999999988877653 5689999999984
No 236
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=99.01 E-value=2.3e-10 Score=124.70 Aligned_cols=111 Identities=14% Similarity=0.056 Sum_probs=81.0
Q ss_pred CccEEEEEcCCCCCCcCcccHH-HHHHHHH-CCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRS-ELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIV 572 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~-~~~~l~~-~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 572 (728)
..|+||++||..+.. ...|.. ....|++ .||.|+++|+||+|... +... .. .-....+|+.+.+++|.++..+
T Consensus 69 ~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~--~~~~-~~-~~~~~~~dl~~~i~~l~~~~g~ 143 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQ--YSQA-SQ-NIRVVGAEVAYLVQVLSTSLNY 143 (432)
T ss_dssp TSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHHHHTSC--HHHH-HH-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECccccCcc--chhh-Hh-hHHHHHHHHHHHHHHHHHhcCC
Confidence 458999999976543 234555 5677776 79999999999988642 1111 00 0112346777788888755445
Q ss_pred CCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 573 KEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 573 d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
+.+++.++|||+||.+++.++.++|++++++++..|..
T Consensus 144 ~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 144 APENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 67899999999999999999999999999999877743
No 237
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.99 E-value=2e-07 Score=97.94 Aligned_cols=238 Identities=7% Similarity=0.054 Sum_probs=136.1
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCcc-c----------eeeeEEEecCCCEEEEEEecCCCCc
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA-V----------RVSNIAWAKDGQALIYVVTDQNKRP 194 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~-~----------~~~~~~WspDg~~l~y~~~~~~~~~ 194 (728)
...+.|||||++|+++. ..++ .|+++|+++++.+..... . ....+.|+|||+.||.+... ..
T Consensus 91 ~~~~~~s~dg~~l~v~~-~~~~---~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---~~ 163 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGN-TVNS---AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG---KE 163 (353)
T ss_dssp CCSEEEETTTTEEEEEE-TTTT---EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES---SS
T ss_pred cceEEECCCCCEEEEEe-cCCC---EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC---CC
Confidence 34567999999887764 3322 599999999986543221 1 14668999999988877532 13
Q ss_pred ceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeE-EeeecC---Cc--eEE
Q 004839 195 YQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLT-LIWECE---GL--AHC 268 (728)
Q Consensus 195 ~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~-~l~~~~---~~--~~~ 268 (728)
..|+.+|+.+++....+ .... .....+.++|||++|++... ..+|+++|+.++ +.. .+.... .. ...
T Consensus 164 ~~i~~~d~~~~~~~~~~-~~~~-~~~~~~~~s~dg~~l~~~~~---~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~ 236 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAI-QNTG-KMSTGLALDSEGKRLYTTNA---DGELITIDTADN--KILSRKKLLDDGKEHFFINI 236 (353)
T ss_dssp CEEEEEETTTTEEEEEE-CCCC-TTCCCCEEETTTTEEEEECT---TSEEEEEETTTT--EEEEEEECCCSSSCCCEEEE
T ss_pred ceEEEEcCCCCceEEEe-cCCC-CccceEEECCCCCEEEEEcC---CCeEEEEECCCC--eEEEEEEcCCCCCCcccceE
Confidence 47999999876422222 2111 11234678999999887654 357999999873 332 222211 11 123
Q ss_pred EEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEec
Q 004839 269 IVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSL 348 (728)
Q Consensus 269 ~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l 348 (728)
.++++|+.+|+....+ ..|+.++.. . .+....+....... -.+...++.+++....++ .|.++++
T Consensus 237 ~~s~dg~~l~~~~~~~--------~~v~~~d~~-~---~~~~~~~~~~~~~~-~~~s~dg~~l~v~~~~~~--~v~~~d~ 301 (353)
T 3vgz_A 237 SLDTARQRAFITDSKA--------AEVLVVDTR-N---GNILAKVAAPESLA-VLFNPARNEAYVTHRQAG--KVSVIDA 301 (353)
T ss_dssp EEETTTTEEEEEESSS--------SEEEEEETT-T---CCEEEEEECSSCCC-EEEETTTTEEEEEETTTT--EEEEEET
T ss_pred EECCCCCEEEEEeCCC--------CEEEEEECC-C---CcEEEEEEcCCCce-EEECCCCCEEEEEECCCC--eEEEEEC
Confidence 5678888887654322 347777765 2 22222222222111 123334567777655444 6778887
Q ss_pred CCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEcc-------CCCCceEEEEE
Q 004839 349 PLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISS-------PVMPDAVVDYD 406 (728)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss-------~~~p~~~~~~~ 406 (728)
.+++ + ...++.+.....+ .++.+++.+.++..+ ...|..+++++
T Consensus 302 ~~~~------~----~~~~~~~~~~~~~----~~s~dg~~l~v~~~~~~~~~~~~~~~~~v~~i~ 352 (353)
T 3vgz_A 302 KSYK------V----VKTFDTPTHPNSL----ALSADGKTLYVSVKQKSTKQQEATQPDDVIRIA 352 (353)
T ss_dssp TTTE------E----EEEEECCSEEEEE----EECTTSCEEEEEEECCCBTTBCCSSCEEEEEEE
T ss_pred CCCe------E----EEEEecCCCCCeE----EEcCCCCEEEEEEcccccccccccCCCcEEEEe
Confidence 6532 1 1123344333332 245677777776665 34455666654
No 238
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=98.98 E-value=3.3e-10 Score=127.21 Aligned_cols=132 Identities=18% Similarity=0.024 Sum_probs=89.4
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC-cCcccHHHHHHHHH-CCeEEEEEcCCCC-CCCCCccccccccC
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL-LDKRWRSELKSLLD-RGWVVAFADVRGG-GGGGKKWHHDGRRT 550 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~l~~-~Gy~v~~~d~RG~-g~~G~~~~~~~~~~ 550 (728)
+.|...+. ++.|+.. .+++.|+||++|||.... ...........|++ +|++|+.+|||.+ -||+.... ....
T Consensus 93 ~edcl~l~--v~~P~~~-~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~--~~~~ 167 (543)
T 2ha2_A 93 SEDCLYLN--VWTPYPR-PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPG--SREA 167 (543)
T ss_dssp ESCCCEEE--EEEESSC-CSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTT--CSSC
T ss_pred CCcCCeEE--EeecCCC-CCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCC--CCCC
Confidence 56765554 5567642 345689999999974221 11111122356665 7999999999943 23322210 0111
Q ss_pred CCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhC--CCceeEEEEeCCcc
Q 004839 551 KKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCC--PDLFRAVVLEVPFL 610 (728)
Q Consensus 551 ~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--p~~f~a~v~~~p~~ 610 (728)
.+...+.|.+++++|+.++- ..||+||.|+|+|+||++++.++... +.+|+++|+.+|..
T Consensus 168 ~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 168 PGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 23346899999999998752 36999999999999999999887742 46999999999854
No 239
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.98 E-value=2.6e-08 Score=121.54 Aligned_cols=188 Identities=9% Similarity=0.030 Sum_probs=120.5
Q ss_pred eeceeeC-CCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cc-eeeeEEEecCCCEEEEEEecCCCCcceeE-EEE
Q 004839 126 EELSEVS-PDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AV-RVSNIAWAKDGQALIYVVTDQNKRPYQIY-CSI 201 (728)
Q Consensus 126 ~~~~~~S-PDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~-~~~~~~WspDg~~l~y~~~~~~~~~~~v~-~~~ 201 (728)
+..+.|| |||++|||.. .+ +|+++++.+++...++. .. .+..+.|+ ||+.|+|... ...|| +++
T Consensus 298 v~~~~~S~pdG~~la~~~--~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~d 365 (1045)
T 1k32_A 298 KFAEDFSPLDGDLIAFVS--RG----QAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIYD 365 (1045)
T ss_dssp GGEEEEEECGGGCEEEEE--TT----EEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-----TEEEEEEEE
T ss_pred cceeeecCCCCCEEEEEE--cC----EEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-----CCceEEEEE
Confidence 5678999 9999999986 33 49999999988766544 33 67789999 9999999753 34899 999
Q ss_pred CCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-Cc-eEEEEeecCCEEEE
Q 004839 202 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-GL-AHCIVEHHEGFLYL 279 (728)
Q Consensus 202 l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~~-~~~~~~~dg~~l~~ 279 (728)
+.++....+. ........+.|||||++|++.+.. ..|+++|+++ ++.+.+.... .. ....+++||+.|++
T Consensus 366 ~~~~~~~~l~---~~~~~~~~~~~SpDG~~la~~~~~---~~v~~~d~~t--g~~~~~~~~~~~~v~~~~~SpDG~~la~ 437 (1045)
T 1k32_A 366 YRTGKAEKFE---ENLGNVFAMGVDRNGKFAVVANDR---FEIMTVDLET--GKPTVIERSREAMITDFTISDNSRFIAY 437 (1045)
T ss_dssp TTTCCEEECC---CCCCSEEEEEECTTSSEEEEEETT---SEEEEEETTT--CCEEEEEECSSSCCCCEEECTTSCEEEE
T ss_pred CCCCCceEec---CCccceeeeEECCCCCEEEEECCC---CeEEEEECCC--CceEEeccCCCCCccceEECCCCCeEEE
Confidence 8776433222 222234568999999999987764 4799999987 4555555332 22 34567899998888
Q ss_pred EEcCC-ccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCC
Q 004839 280 FTDAA-KEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGR 339 (728)
Q Consensus 280 ~tn~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g 339 (728)
..... ..........|+..+++ . .....+..+ ......+.+. ++.|++....++
T Consensus 438 ~~~~~~~~~~~~~~~~i~l~d~~-~---g~~~~l~~~--~~~~~~~~~spdG~~l~~~s~~~~ 494 (1045)
T 1k32_A 438 GFPLKHGETDGYVMQAIHVYDME-G---RKIFAATTE--NSHDYAPAFDADSKNLYYLSYRSL 494 (1045)
T ss_dssp EEEECSSTTCSCCEEEEEEEETT-T---TEEEECSCS--SSBEEEEEECTTSCEEEEEESCCC
T ss_pred EecCccccccCCCCCeEEEEECC-C---CcEEEeeCC--CcccCCceEcCCCCEEEEEecccC
Confidence 76532 00000013467777765 2 223333222 2223334444 456776655433
No 240
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=98.98 E-value=2.6e-09 Score=111.92 Aligned_cols=207 Identities=14% Similarity=0.072 Sum_probs=115.0
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCC
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 573 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 573 (728)
+..|.||++||.........|......| +.||.|+.+|+||+|..... ..+++++.+.+..++..- ..
T Consensus 79 ~~~~~lv~lhG~~~~~~~~~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~----------~~~~~~~~~~~~~~l~~~-~~ 146 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQVYSRLAEEL-DAGRRVSALVPPGFHGGQAL----------PATLTVLVRSLADVVQAE-VA 146 (319)
T ss_dssp CSSCEEEEECCSSTTCSGGGGHHHHHHH-CTTSEEEEEECTTSSTTCCE----------ESSHHHHHHHHHHHHHHH-HT
T ss_pred CCCCeEEEECCCCcCCCHHHHHHHHHHh-CCCceEEEeeCCCCCCCCCC----------CCCHHHHHHHHHHHHHHh-cC
Confidence 3458899999931112234577777777 78999999999999853211 124555444333332211 12
Q ss_pred CCcEEEEEeCccHHHHHHHHHhC---CCceeEEEEeCCcccchh--hcc--CCCCCCC-cccccccCCCCC-HHHH----
Q 004839 574 EHKLAGWGYSAGGLLVAAAINCC---PDLFRAVVLEVPFLDATN--TLL--YPILPLI-AADYEEFGYPGD-IDDF---- 640 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~~~---p~~f~a~v~~~p~~d~~~--~~~--~~~~~~~-~~~~~~~g~p~~-~~~~---- 640 (728)
.+++.++|||+||.++..++.++ |++++++|+..+...... ... ...+... ......+..... ....
T Consensus 147 ~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 226 (319)
T 3lcr_A 147 DGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITAQV 226 (319)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHHHH
Confidence 36899999999999999998877 888999998776432111 000 0000000 000000110000 1111
Q ss_pred ---HHHHccCcccccccCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhCCCCCCCccEEEEcCCCCCCCch-hhhHHHHH
Q 004839 641 ---HAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENR-YLQCKESA 716 (728)
Q Consensus 641 ---~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~ 716 (728)
..+..+.| .. ++.|+|+|+|.. +.+++.....+.+.+.... .+... +++|..... ...-....
T Consensus 227 ~~~~~~~~~~~----~~-i~~PvLli~g~~-~~~~~~~~~~~~~~~~~~~------~~~~~-~g~H~~~~~~~~~~~va~ 293 (319)
T 3lcr_A 227 WCLELLRGWRP----EG-LTAPTLYVRPAQ-PLVEQEKPEWRGDVLAAMG------QVVEA-PGDHFTIIEGEHVASTAH 293 (319)
T ss_dssp HHHHHTTTCCC----CC-CSSCEEEEEESS-CSSSCCCTHHHHHHHHTCS------EEEEE-SSCTTGGGSTTTHHHHHH
T ss_pred HHHHHHhcCCC----CC-cCCCEEEEEeCC-CCCCcccchhhhhcCCCCc------eEEEe-CCCcHHhhCcccHHHHHH
Confidence 11112222 33 889999999876 6677777778877776422 23323 457764332 23333344
Q ss_pred HHHHHHHHh
Q 004839 717 LETAFLIKM 725 (728)
Q Consensus 717 ~~~afl~~~ 725 (728)
.+.+||.+.
T Consensus 294 ~i~~fL~~~ 302 (319)
T 3lcr_A 294 IVGDWLREA 302 (319)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 567888764
No 241
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=98.98 E-value=7.2e-09 Score=103.89 Aligned_cols=199 Identities=11% Similarity=0.043 Sum_probs=118.1
Q ss_pred cEEEEEcCCCCCCcCcccHHHHHHHHHCC---eEEEEEcCCCCCC--CCCccc--------cccccCCCC------CcHH
Q 004839 497 PGLLHGHGAYGELLDKRWRSELKSLLDRG---WVVAFADVRGGGG--GGKKWH--------HDGRRTKKL------NSIK 557 (728)
Q Consensus 497 P~vv~~hGg~~~~~~~~~~~~~~~l~~~G---y~v~~~d~RG~g~--~G~~~~--------~~~~~~~~~------~~~~ 557 (728)
+.||++||..++. ..|...+..|+++| +.|+.+|+++.|. +...+. +-....... ...+
T Consensus 5 ~pvv~iHG~~~~~--~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~ 82 (250)
T 3lp5_A 5 APVIMVPGSSASQ--NRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV 82 (250)
T ss_dssp CCEEEECCCGGGH--HHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHH
T ss_pred CCEEEECCCCCCH--HHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHH
Confidence 4467899965533 56788889999877 6788777776663 111110 000001100 1236
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC-----CCceeEEEEeCCcccchhhccCCCCCCCcccccccC
Q 004839 558 DFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC-----PDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFG 632 (728)
Q Consensus 558 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~-----p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g 632 (728)
++.+++++|.++- .-+++.++||||||.++...+.++ |++++.+|+.++..+-... . +
T Consensus 83 ~l~~~~~~l~~~~--~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~----~-~---------- 145 (250)
T 3lp5_A 83 WLNTAFKALVKTY--HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMEST----S-T---------- 145 (250)
T ss_dssp HHHHHHHHHHTTS--CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCC----C-S----------
T ss_pred HHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccc----c-c----------
Confidence 6677777777553 337899999999999999988876 6788999988775543210 0 0
Q ss_pred CCCCHHHHHHHHccCcccccccCCCCCeEEEEcC----CCCCCCHHHHHHHHHHHHhCCCCCCCccEEE-EcCCCCCCCc
Q 004839 633 YPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSS----FNTRFGVWEAAKWVARVRESTIYDPKRPILL-NLTTDIVEEN 707 (728)
Q Consensus 633 ~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~----~D~~Vp~~~~~~~~~~L~~~~~~~~~~~~~~-~~~~gH~~~~ 707 (728)
......+..+.+.. ..+. .+.|+++|.|. .|..||...+..+...++..... -..+.+ -++++|...-
T Consensus 146 -~~~~~~~~~l~~~~--~~lp--~~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~--~~~~~v~g~~a~H~~l~ 218 (250)
T 3lp5_A 146 -TAKTSMFKELYRYR--TGLP--ESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKH--FTEITVTGANTAHSDLP 218 (250)
T ss_dssp -SCCCHHHHHHHHTG--GGSC--TTCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSE--EEEEECTTTTBSSCCHH
T ss_pred -cccCHHHHHHHhcc--ccCC--CCceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccc--eEEEEEeCCCCchhcch
Confidence 01112333343221 2222 26799999998 89999998888877777653211 011222 2457797644
Q ss_pred hhhhHHHHHHHHHHHH
Q 004839 708 RYLQCKESALETAFLI 723 (728)
Q Consensus 708 ~~~~~~~~~~~~afl~ 723 (728)
... +......+||.
T Consensus 219 e~~--~v~~~I~~FL~ 232 (250)
T 3lp5_A 219 QNK--QIVSLIRQYLL 232 (250)
T ss_dssp HHH--HHHHHHHHHTS
T ss_pred hCH--HHHHHHHHHHh
Confidence 222 23444567764
No 242
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.94 E-value=8.4e-07 Score=93.12 Aligned_cols=247 Identities=8% Similarity=-0.031 Sum_probs=144.0
Q ss_pred eeceeeCCCCCEEEEEEEcCCC---cEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDN---DYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 201 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~---e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~ 201 (728)
...+.+||||++|++. +..+. ....|+++|+++++.+.... ......+.|+|||+.||++... ...|+.+|
T Consensus 43 ~~~~~~s~dg~~l~~~-~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~----~~~v~~~d 117 (353)
T 3vgz_A 43 AYEMAYSQQENALWLA-TSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTV----NSAVTAID 117 (353)
T ss_dssp EEEEEEETTTTEEEEE-ECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETT----TTEEEEEE
T ss_pred ccceEECCCCCEEEEE-cCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecC----CCEEEEEe
Confidence 3457799999999665 43332 13579999999998665433 3346789999999988877432 34799999
Q ss_pred CCCCCc-eeEEeeecC------cceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeee-cC-CceEEEEee
Q 004839 202 IGSTDE-DALLLEESN------ENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWE-CE-GLAHCIVEH 272 (728)
Q Consensus 202 l~t~~~-~~lv~~~~~------~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~-~~-~~~~~~~~~ 272 (728)
+.+++. ..+...... +....++.++|||++|++.... ....|+++|+.+ ++.....+ .. ......+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG-KESVIWVVDGGN--IKLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-SSCEEEEEETTT--TEEEEEECCCCTTCCCCEEET
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-CCceEEEEcCCC--CceEEEecCCCCccceEEECC
Confidence 988752 222211110 0113457899999998877642 245799999987 33333333 21 223346778
Q ss_pred cCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeec---CCCceEEEEEee--CCEEEEEEecCCeeEEEEEe
Q 004839 273 HEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFID---DQGLVVEDVDFC--KTHMALILREGRTYRLCSVS 347 (728)
Q Consensus 273 dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~---~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~ 347 (728)
+|+.+|+... + ..|+.++.. . .+....+.. .+...+.++.+. ++.+++.... ...|.++|
T Consensus 195 dg~~l~~~~~-~--------~~i~~~d~~-~---~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d 259 (353)
T 3vgz_A 195 EGKRLYTTNA-D--------GELITIDTA-D---NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK--AAEVLVVD 259 (353)
T ss_dssp TTTEEEEECT-T--------SEEEEEETT-T---TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS--SSEEEEEE
T ss_pred CCCEEEEEcC-C--------CeEEEEECC-C---CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC--CCEEEEEE
Confidence 8888777543 2 246666654 1 111111221 123345555555 4567665433 34688888
Q ss_pred cCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEE
Q 004839 348 LPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWN 413 (728)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~ 413 (728)
+.+++ .+ ..++.+... +..++.+++.+.+.... -..++.+|..+++..
T Consensus 260 ~~~~~-----~~-----~~~~~~~~~-----~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 260 TRNGN-----IL-----AKVAAPESL-----AVLFNPARNEAYVTHRQ---AGKVSVIDAKSYKVV 307 (353)
T ss_dssp TTTCC-----EE-----EEEECSSCC-----CEEEETTTTEEEEEETT---TTEEEEEETTTTEEE
T ss_pred CCCCc-----EE-----EEEEcCCCc-----eEEECCCCCEEEEEECC---CCeEEEEECCCCeEE
Confidence 76543 01 122232211 11234567766554432 258999999888754
No 243
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=98.92 E-value=2.1e-08 Score=104.65 Aligned_cols=104 Identities=16% Similarity=0.154 Sum_probs=72.3
Q ss_pred ccEEEEEcCCCCCCcCcccHHHHHHHHH-CCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCC-
Q 004839 496 NPGLLHGHGAYGELLDKRWRSELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK- 573 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~~~~~~~~~l~~-~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d- 573 (728)
.|.||++||+.++. ..|......|++ .+|.|+.+|+||+|.+... .....+++++.+.+..+++.-..+
T Consensus 38 ~p~lvllHG~~~~~--~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~-------~~~~~~~~~~a~dl~~~l~~l~~~~ 108 (316)
T 3c5v_A 38 GPVLLLLHGGGHSA--LSWAVFTAAIISRVQCRIVALDLRSHGETKVK-------NPEDLSAETMAKDVGNVVEAMYGDL 108 (316)
T ss_dssp SCEEEEECCTTCCG--GGGHHHHHHHHTTBCCEEEEECCTTSTTCBCS-------CTTCCCHHHHHHHHHHHHHHHHTTC
T ss_pred CcEEEEECCCCccc--ccHHHHHHHHhhcCCeEEEEecCCCCCCCCCC-------CccccCHHHHHHHHHHHHHHHhccC
Confidence 47899999975533 457777777776 3899999999999976321 111235555554444444321011
Q ss_pred CCcEEEEEeCccHHHHHHHHHh--CCCceeEEEEeCCc
Q 004839 574 EHKLAGWGYSAGGLLVAAAINC--CPDLFRAVVLEVPF 609 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~~--~p~~f~a~v~~~p~ 609 (728)
++++.++||||||.+++.++.+ +|+ ++++|+..+.
T Consensus 109 ~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 109 PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 2689999999999999999985 577 8888887653
No 244
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=98.91 E-value=3.9e-09 Score=105.42 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=63.8
Q ss_pred CccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHc-CCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEK-EIVK 573 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d 573 (728)
..|.||++||..+.. ..|......|. .+|.|+.+|.||+|.+... ..+|+.+.++.+++. +...
T Consensus 12 ~~~~lv~lhg~g~~~--~~~~~~~~~L~-~~~~vi~~Dl~GhG~S~~~------------~~~~~~~~~~~~~~~l~~~~ 76 (242)
T 2k2q_B 12 EKTQLICFPFAGGYS--ASFRPLHAFLQ-GECEMLAAEPPGHGTNQTS------------AIEDLEELTDLYKQELNLRP 76 (242)
T ss_dssp CCCEEESSCCCCHHH--HHHHHHHHHHC-CSCCCEEEECCSSCCSCCC------------TTTHHHHHHHHTTTTCCCCC
T ss_pred CCceEEEECCCCCCH--HHHHHHHHhCC-CCeEEEEEeCCCCCCCCCC------------CcCCHHHHHHHHHHHHHhhc
Confidence 346789999975533 35666666664 4799999999999975321 234666666666543 2222
Q ss_pred CCcEEEEEeCccHHHHHHHHHh------CCCce
Q 004839 574 EHKLAGWGYSAGGLLVAAAINC------CPDLF 600 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~~------~p~~f 600 (728)
.+++.++||||||.++..++.+ +|+++
T Consensus 77 ~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v 109 (242)
T 2k2q_B 77 DRPFVLFGHSMGGMITFRLAQKLEREGIFPQAV 109 (242)
T ss_dssp CSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSE
T ss_pred CCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEE
Confidence 3689999999999999998876 57754
No 245
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=98.88 E-value=3.7e-09 Score=107.51 Aligned_cols=101 Identities=11% Similarity=-0.014 Sum_probs=70.2
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCC
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 573 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 573 (728)
+..|.||++||+.+.. ..|..... | ..||.|+.+|+||.+.. . ....+++++.+.+..+++.-. .
T Consensus 19 ~~~~~lv~lhg~~~~~--~~~~~~~~-l-~~~~~v~~~d~~G~~~~-~---------~~~~~~~~~~~~~~~~i~~~~-~ 83 (265)
T 3ils_A 19 VARKTLFMLPDGGGSA--FSYASLPR-L-KSDTAVVGLNCPYARDP-E---------NMNCTHGAMIESFCNEIRRRQ-P 83 (265)
T ss_dssp TSSEEEEEECCTTCCG--GGGTTSCC-C-SSSEEEEEEECTTTTCG-G---------GCCCCHHHHHHHHHHHHHHHC-S
T ss_pred CCCCEEEEECCCCCCH--HHHHHHHh-c-CCCCEEEEEECCCCCCC-C---------CCCCCHHHHHHHHHHHHHHhC-C
Confidence 3457889999986644 34554445 4 78999999999996421 1 112456666655544443321 2
Q ss_pred CCcEEEEEeCccHHHHHHHHH---hCCCceeEEEEeCCc
Q 004839 574 EHKLAGWGYSAGGLLVAAAIN---CCPDLFRAVVLEVPF 609 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~---~~p~~f~a~v~~~p~ 609 (728)
..++.++|||+||.++..++. .+|++++++|+..+.
T Consensus 84 ~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~ 122 (265)
T 3ils_A 84 RGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAP 122 (265)
T ss_dssp SCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCC
Confidence 258999999999999999887 678889999887654
No 246
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.88 E-value=3.3e-09 Score=118.74 Aligned_cols=132 Identities=14% Similarity=0.035 Sum_probs=89.0
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC-cCcccHHHHHHHHH-CCeEEEEEcCCCCC-CCCCccccccccC
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL-LDKRWRSELKSLLD-RGWVVAFADVRGGG-GGGKKWHHDGRRT 550 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~l~~-~Gy~v~~~d~RG~g-~~G~~~~~~~~~~ 550 (728)
+.|...+ .++.|.... ++.|+||++|||.... ...........|++ .|++|+.+|||-+. ||+..... ...
T Consensus 89 ~edcl~l--nv~~P~~~~--~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~--~~~ 162 (529)
T 1p0i_A 89 SEDCLYL--NVWIPAPKP--KNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGN--PEA 162 (529)
T ss_dssp CSCCCEE--EEEEESSCC--SSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTC--TTS
T ss_pred CCcCCeE--EEeeCCCCC--CCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCCC--CCC
Confidence 4565444 456776532 5689999999974211 11111122356666 79999999999431 22111000 011
Q ss_pred CCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhC--CCceeEEEEeCCccc
Q 004839 551 KKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCC--PDLFRAVVLEVPFLD 611 (728)
Q Consensus 551 ~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--p~~f~a~v~~~p~~d 611 (728)
.+...+.|.+++++|+.++- ..||+||.|+|+|+||.+++.++... ..+|+++|+.+|...
T Consensus 163 ~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 163 PGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred cCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 23346899999999998752 36999999999999999999988753 468999999999754
No 247
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=98.88 E-value=2.1e-08 Score=108.32 Aligned_cols=120 Identities=10% Similarity=0.023 Sum_probs=88.7
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHH------CCeEEEEEcCCCCCCCCCcccccccc
Q 004839 476 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLD------RGWVVAFADVRGGGGGGKKWHHDGRR 549 (728)
Q Consensus 476 dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~------~Gy~v~~~d~RG~g~~G~~~~~~~~~ 549 (728)
||..|++....++. ...|.||++||.+++. ..|...+..|++ .||.|+++|.||+|.+... .
T Consensus 93 ~g~~i~~~~~~~~~----~~~~pllllHG~~~s~--~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~------~ 160 (408)
T 3g02_A 93 EGLTIHFAALFSER----EDAVPIALLHGWPGSF--VEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGP------P 160 (408)
T ss_dssp TTEEEEEEEECCSC----TTCEEEEEECCSSCCG--GGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCS------C
T ss_pred CCEEEEEEEecCCC----CCCCeEEEECCCCCcH--HHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCC------C
Confidence 89999876654332 2346789999987754 457778888887 5999999999999976432 1
Q ss_pred CCCCCcHHHHHHHHHHHHHcCCCCCC-cEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCc
Q 004839 550 TKKLNSIKDFISCARFLIEKEIVKEH-KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 609 (728)
Q Consensus 550 ~~~~~~~~D~~~~~~~l~~~~~~d~~-ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~ 609 (728)
.....+++++.+.+..|+++- .-+ ++.++|+|+||.+++.++.++|+++...+...++
T Consensus 161 ~~~~~~~~~~a~~~~~l~~~l--g~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~ 219 (408)
T 3g02_A 161 LDKDFGLMDNARVVDQLMKDL--GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNM 219 (408)
T ss_dssp SSSCCCHHHHHHHHHHHHHHT--TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHh--CCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCC
Confidence 112346788888777777652 224 8999999999999999999998877666655443
No 248
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.88 E-value=8.2e-10 Score=124.10 Aligned_cols=131 Identities=15% Similarity=0.066 Sum_probs=87.5
Q ss_pred CCCCcEEEEEEEEc-----CCCCCCCC----ccEEEEEcCCCCCC-cCcccHHHHHHHHHCCeEEEEEcCCCCC-CCCCc
Q 004839 474 SHDGISVPLTIIYS-----PKYKKENQ----NPGLLHGHGAYGEL-LDKRWRSELKSLLDRGWVVAFADVRGGG-GGGKK 542 (728)
Q Consensus 474 s~dG~~i~~~l~~p-----~~~~~~~~----~P~vv~~hGg~~~~-~~~~~~~~~~~l~~~Gy~v~~~d~RG~g-~~G~~ 542 (728)
+.|. +...++.| ... ..++ .|+||++|||.... ...........|+++|++|+.+|||.+. |+...
T Consensus 87 ~edc--L~lnv~~P~~~~~~~~-~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~ 163 (551)
T 2fj0_A 87 SEAC--IHANIHVPYYALPRDA-ADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSL 163 (551)
T ss_dssp CSCC--CEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCC
T ss_pred CCCC--eEEEEEecCccccccc-cccCcCCCCCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccC
Confidence 4555 44456677 322 2233 89999999974211 1111112345678899999999999642 22211
Q ss_pred cccccccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHh--CCCceeEEEEeCCcc
Q 004839 543 WHHDGRRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINC--CPDLFRAVVLEVPFL 610 (728)
Q Consensus 543 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~--~p~~f~a~v~~~p~~ 610 (728)
.. ....+...+.|.+++++|+.++- ..||+||.|+|+|+||.+++.++.. .+.+|+++|+.+|..
T Consensus 164 ~~---~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 164 NS---TSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp SS---SSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred cc---cCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 11 11223456899999999998752 3599999999999999999998875 367999999999863
No 249
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=98.88 E-value=3.3e-09 Score=110.03 Aligned_cols=105 Identities=16% Similarity=0.022 Sum_probs=75.7
Q ss_pred CCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHH-HHHHcCCC
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCAR-FLIEKEIV 572 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~ 572 (728)
+..|.||++||..+......|......|. .+|.|+.+|+||+|.... ...+++++.+.+. .+.+. .
T Consensus 65 ~~~~~lvllhG~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~----------~~~~~~~~a~~~~~~l~~~--~ 131 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPHEFTRLAGALR-GIAPVRAVPQPGYEEGEP----------LPSSMAAVAAVQADAVIRT--Q 131 (300)
T ss_dssp SCSSEEEECCCSSTTCSTTTTHHHHHHTS-SSCCBCCCCCTTSSTTCC----------BCSSHHHHHHHHHHHHHHH--C
T ss_pred CCCCeEEEECCCcccCcHHHHHHHHHhcC-CCceEEEecCCCCCCCCC----------CCCCHHHHHHHHHHHHHHh--c
Confidence 44688999999765432245666666554 569999999999986321 1236677666544 44443 2
Q ss_pred CCCcEEEEEeCccHHHHHHHHHhCC---CceeEEEEeCCccc
Q 004839 573 KEHKLAGWGYSAGGLLVAAAINCCP---DLFRAVVLEVPFLD 611 (728)
Q Consensus 573 d~~ri~i~G~S~GG~~~~~~~~~~p---~~f~a~v~~~p~~d 611 (728)
+.+++.++|+|+||.+++.++.++| ++++++|+..+...
T Consensus 132 ~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~ 173 (300)
T 1kez_A 132 GDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPP 173 (300)
T ss_dssp SSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCT
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCC
Confidence 3468999999999999999999988 48999999887643
No 250
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.88 E-value=7.8e-07 Score=92.69 Aligned_cols=250 Identities=10% Similarity=-0.005 Sum_probs=132.2
Q ss_pred ceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCce-eccCc-cceeee-EEEecCCCEEEEEEecCCCCcceeEEEECCC
Q 004839 128 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGAL-CSKPQ-AVRVSN-IAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 204 (728)
Q Consensus 128 ~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~-~~~~~-~~~~~~-~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t 204 (728)
.+.|||||++|+++. ..++ .|+++|+++++. ..... ...... ++|+|||+.|+ +... ......|+++++.+
T Consensus 44 ~~~~s~dg~~l~~~~-~~~~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~-~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 44 DTAITSDCSNVVVTS-DFCQ---TLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV-TVTG-LNHPFNMQSYSFLK 117 (331)
T ss_dssp EEEECSSSCEEEEEE-STTC---EEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-ECCC-SSSSCEEEEEETTT
T ss_pred eEEEcCCCCEEEEEe-CCCC---eEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-EecC-CCCcccEEEEECCC
Confidence 778999999887764 3222 599999999986 33222 233445 89999999888 4322 21223799999987
Q ss_pred CCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCe-----EEeeecCCceEEEEeecCCEEEE
Q 004839 205 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL-----TLIWECEGLAHCIVEHHEGFLYL 279 (728)
Q Consensus 205 ~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~-----~~l~~~~~~~~~~~~~dg~~l~~ 279 (728)
++.... +.... ....+.|+|||++|++....... .+++++++.. +.. +.+..........++++|+.+|+
T Consensus 118 ~~~~~~-~~~~~--~~~~~~~spdg~~l~~~~~~~~~-~i~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 192 (331)
T 3u4y_A 118 NKFIST-IPIPY--DAVGIAISPNGNGLILIDRSSAN-TVRRFKIDAD-GVLFDTGQEFISGGTRPFNITFTPDGNFAFV 192 (331)
T ss_dssp TEEEEE-EECCT--TEEEEEECTTSSCEEEEEETTTT-EEEEEEECTT-CCEEEEEEEEECSSSSEEEEEECTTSSEEEE
T ss_pred CCeEEE-EECCC--CccceEECCCCCEEEEEecCCCc-eEEEEEECCC-CcEeecCCccccCCCCccceEECCCCCEEEE
Confidence 642222 22221 12468899999998777654333 2555554432 222 12211222234466788888887
Q ss_pred EEcCCccCCCCCceEEEEeeCCCCCCCCCC---eEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCCCCCC
Q 004839 280 FTDAAKEGQEADNHYLLRCPVDASFPSRTW---ESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPLPAGK 354 (728)
Q Consensus 280 ~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~~~~~ 354 (728)
....+ ..|..+++. . ... ...++.. ..+..+.+. ++.|++... +...|.++++.+++
T Consensus 193 ~~~~~--------~~v~v~d~~-~---~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~--~~~~i~~~d~~~~~-- 254 (331)
T 3u4y_A 193 ANLIG--------NSIGILETQ-N---PENITLLNAVGTN--NLPGTIVVSRDGSTVYVLTE--STVDVFNFNQLSGT-- 254 (331)
T ss_dssp EETTT--------TEEEEEECS-S---TTSCEEEEEEECS--SCCCCEEECTTSSEEEEECS--SEEEEEEEETTTTE--
T ss_pred EeCCC--------CeEEEEECC-C---CcccceeeeccCC--CCCceEEECCCCCEEEEEEc--CCCEEEEEECCCCc--
Confidence 65443 235555554 2 222 2223322 233344444 455655533 44568888876542
Q ss_pred cceeecccccccccC-CCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeE
Q 004839 355 GVVHLKELHPHFLPL-PKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKW 412 (728)
Q Consensus 355 ~~~~~~~~~~~~~~~-p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~ 412 (728)
...+... ...+.. +..... ..+..+++++..+.+.... -..+..+|+..+..
T Consensus 255 -~~~~~~~-~~~~~~~~~~~~~-~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 255 -LSFVKSF-GHGLLIDPRPLFG-ANQMALNKTETKLFISANI---SRELKVFTISGKVV 307 (331)
T ss_dssp -EEEEEEE-ECCCCCCCGGGTT-CCCEEECTTSSEEEEEETT---TTEEEEEETTSCEE
T ss_pred -eeeeccc-ccccccCCCCccc-ccceEECCCCCEEEEecCC---CCcEEEEEecCCcc
Confidence 0001000 000101 111000 0011345677776555432 24788888876554
No 251
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.86 E-value=2.1e-07 Score=96.84 Aligned_cols=247 Identities=13% Similarity=0.075 Sum_probs=134.8
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cc------eeeeEEEecCCCEEEEEEecC----CC--
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AV------RVSNIAWAKDGQALIYVVTDQ----NK-- 192 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~------~~~~~~WspDg~~l~y~~~~~----~~-- 192 (728)
...+.|||||++|+++....+ .|+++|+++++.+.... .. ....++|+|||+.|++..... ..
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~----~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSE----SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTT----EEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred ccceEEcCCCCEEEEEeCCCC----eEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccc
Confidence 345779999999877753222 49999999998654322 22 456789999999988874210 01
Q ss_pred -CcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC-ceEEEE
Q 004839 193 -RPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG-LAHCIV 270 (728)
Q Consensus 193 -~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~-~~~~~~ 270 (728)
....|+++++.+++....+ ..... ...+.++|||++|++. ...|+++|+++ ++.....+... .....+
T Consensus 112 ~~~~~i~v~d~~~~~~~~~~-~~~~~--~~~~~~s~dg~~l~~~-----~~~i~~~d~~~--~~~~~~~~~~~~~~~~~~ 181 (337)
T 1pby_B 112 VQPTRVALYDAETLSRRKAF-EAPRQ--ITMLAWARDGSKLYGL-----GRDLHVMDPEA--GTLVEDKPIQSWEAETYA 181 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEE-ECCSS--CCCEEECTTSSCEEEE-----SSSEEEEETTT--TEEEEEECSTTTTTTTBC
T ss_pred ccCceEEEEECCCCcEEEEE-eCCCC--cceeEECCCCCEEEEe-----CCeEEEEECCC--CcEeeeeeccccCCCcee
Confidence 2358999999776422222 21211 2246799999998887 24699999987 33332222211 112245
Q ss_pred eecCCEEEEEEcCCcc-------------CCC--CCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC--CEEEE
Q 004839 271 EHHEGFLYLFTDAAKE-------------GQE--ADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK--THMAL 333 (728)
Q Consensus 271 ~~dg~~l~~~tn~~~~-------------~~~--~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~--~~lv~ 333 (728)
+++|..+++....... ... ...+.|+.+++. . .+...+-.......+..+.+.. +.+++
T Consensus 182 s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 257 (337)
T 1pby_B 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE-T---GEMAMREVRIMDVFYFSTAVNPAKTRAFG 257 (337)
T ss_dssp CCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT-T---CCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCC-C---CCceEeecCCCCCceeeEEECCCCCEEEE
Confidence 6777766543322110 000 001246666665 2 2221111111122344555553 46665
Q ss_pred EEecCCeeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEE
Q 004839 334 ILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWN 413 (728)
Q Consensus 334 ~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~ 413 (728)
. ...|.++++.+++ .+ ..+..+.....+ .++.+++.+.+. + ....+..+|+.+++..
T Consensus 258 ~-----~~~v~~~d~~~~~-----~~-----~~~~~~~~~~~~----~~s~dg~~l~~~-~---~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 258 A-----YNVLESFDLEKNA-----SI-----KRVPLPHSYYSV----NVSTDGSTVWLG-G---ALGDLAAYDAETLEKK 314 (337)
T ss_dssp E-----ESEEEEEETTTTE-----EE-----EEEECSSCCCEE----EECTTSCEEEEE-S---BSSEEEEEETTTCCEE
T ss_pred e-----CCeEEEEECCCCc-----Cc-----ceecCCCceeeE----EECCCCCEEEEE-c---CCCcEEEEECcCCcEE
Confidence 5 2568888876532 11 122333222222 235566666553 2 2468999999888754
No 252
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.86 E-value=1.3e-06 Score=90.98 Aligned_cols=244 Identities=9% Similarity=0.016 Sum_probs=136.8
Q ss_pred eeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCc
Q 004839 130 EVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE 207 (728)
Q Consensus 130 ~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~ 207 (728)
.++++++++..+ +..++ .|+++|+++|+...... .... .++|+|||+.||.+... ...|+.+|+.++..
T Consensus 4 ~~~~~~~~~~v~-~~~~~---~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~----~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 4 MFQTTSNFGIVV-EQHLR---RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF----CQTLVQIETQLEPP 74 (331)
T ss_dssp ---CCCCEEEEE-EGGGT---EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST----TCEEEEEECSSSSC
T ss_pred eEcCCCCEEEEE-ecCCC---eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC----CCeEEEEECCCCce
Confidence 467888876555 43332 59999999998765432 2234 89999999988777532 23899999987753
Q ss_pred -eeEEeeecCcceEEE-EEEcCCCCEEEEEEcCC-CceEEEEEeCCCCCCCeEEeeec-CCceEEEEeecCCEEEEEEcC
Q 004839 208 -DALLLEESNENVYVN-IRHTKDFHFVCVHTFST-TSSKVFLINAADPFSGLTLIWEC-EGLAHCIVEHHEGFLYLFTDA 283 (728)
Q Consensus 208 -~~lv~~~~~~~~~~~-~~~SpDg~~l~~~~~~~-~~~~l~~~dl~~~~~~~~~l~~~-~~~~~~~~~~dg~~l~~~tn~ 283 (728)
...+ ...... .. +.++|||++|+ ..... ....|+++|+++ ++.....+. .......++++|+.+|+....
T Consensus 75 ~~~~~-~~~~~~--~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 75 KVVAI-QEGQSS--MADVDITPDDQFAV-TVTGLNHPFNMQSYSFLK--NKFISTIPIPYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp EEEEE-EECSSC--CCCEEECTTSSEEE-ECCCSSSSCEEEEEETTT--TEEEEEEECCTTEEEEEECTTSSCEEEEEET
T ss_pred eEEec-ccCCCC--ccceEECCCCCEEE-EecCCCCcccEEEEECCC--CCeEEEEECCCCccceEECCCCCEEEEEecC
Confidence 2222 222221 23 68999999998 33322 223899999987 333333322 233445678888887776544
Q ss_pred CccCCCCCc-eEEEEeeCCCCCCCCCC----eEEeecCCCceEEEEEeeC--CEEEEEEecCCeeEEEEEecCCCCCCcc
Q 004839 284 AKEGQEADN-HYLLRCPVDASFPSRTW----ESVFIDDQGLVVEDVDFCK--THMALILREGRTYRLCSVSLPLPAGKGV 356 (728)
Q Consensus 284 ~~~~~~~~~-~~l~~~~~~~~~~~~~~----~~li~~~~~~~i~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~~~~~~ 356 (728)
+. . ..++.++.+ +.. ..++.. +.....+.+.. +.+++....++ .+.++++.+++ ..
T Consensus 149 ~~------~~i~~~~~~~~-----g~~~~~~~~~~~~--~~~~~~~~~spdg~~l~v~~~~~~--~v~v~d~~~~~--~~ 211 (331)
T 3u4y_A 149 SA------NTVRRFKIDAD-----GVLFDTGQEFISG--GTRPFNITFTPDGNFAFVANLIGN--SIGILETQNPE--NI 211 (331)
T ss_dssp TT------TEEEEEEECTT-----CCEEEEEEEEECS--SSSEEEEEECTTSSEEEEEETTTT--EEEEEECSSTT--SC
T ss_pred CC------ceEEEEEECCC-----CcEeecCCccccC--CCCccceEECCCCCEEEEEeCCCC--eEEEEECCCCc--cc
Confidence 32 2 445555422 111 122222 23355666654 45766654443 57778876543 00
Q ss_pred eeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEe
Q 004839 357 VHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQ 417 (728)
Q Consensus 357 ~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~~ 417 (728)
..+ ..++....... ..+++++..+.+... ....++.+|+.+++.+.+..
T Consensus 212 ~~~-----~~~~~~~~~~~----~~~spdg~~l~v~~~---~~~~i~~~d~~~~~~~~~~~ 260 (331)
T 3u4y_A 212 TLL-----NAVGTNNLPGT----IVVSRDGSTVYVLTE---STVDVFNFNQLSGTLSFVKS 260 (331)
T ss_dssp EEE-----EEEECSSCCCC----EEECTTSSEEEEECS---SEEEEEEEETTTTEEEEEEE
T ss_pred cee-----eeccCCCCCce----EEECCCCCEEEEEEc---CCCEEEEEECCCCceeeecc
Confidence 001 12222222221 224567776655433 23468899999998765543
No 253
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.83 E-value=4.6e-09 Score=117.60 Aligned_cols=132 Identities=17% Similarity=0.060 Sum_probs=89.1
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC-cCcccHHHHHHHH-HCCeEEEEEcCCCCC-CCCCccccccccC
Q 004839 474 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL-LDKRWRSELKSLL-DRGWVVAFADVRGGG-GGGKKWHHDGRRT 550 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~l~-~~Gy~v~~~d~RG~g-~~G~~~~~~~~~~ 550 (728)
+.|...+ .++.|... .++.|+||++|||.... ...........|+ ++|++|+.+|||-+. ||...- .....
T Consensus 91 sedcl~l--nv~~P~~~--~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~~ 164 (537)
T 1ea5_A 91 SEDCLYL--NIWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALH--GSQEA 164 (537)
T ss_dssp CSCCCEE--EEEECSSC--CSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCT--TCSSS
T ss_pred CCcCCeE--EEeccCCC--CCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCC--CCCCC
Confidence 5666554 45677653 25789999999974221 1111112235666 689999999999431 211110 00111
Q ss_pred CCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHh--CCCceeEEEEeCCccc
Q 004839 551 KKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINC--CPDLFRAVVLEVPFLD 611 (728)
Q Consensus 551 ~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~--~p~~f~a~v~~~p~~d 611 (728)
.+...+.|.+++++|+.++- ..||+||.|+|+|+||.+++.++.. ...+|+++|+.+|...
T Consensus 165 ~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 165 PGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred cCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 23346899999999998752 3699999999999999999988874 2468999999999654
No 254
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=98.81 E-value=4.7e-08 Score=100.73 Aligned_cols=118 Identities=15% Similarity=0.082 Sum_probs=80.6
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.+|.++++... +..|.||++||.++.. ..|......| ..||.|+.+|.||+|.+...- ........
T Consensus 12 ~~~~~~~~~~~--------g~g~~~vllHG~~~~~--~~w~~~~~~l-~~~~~vi~~Dl~G~G~s~~~~---~~~~~~~~ 77 (291)
T 3qyj_A 12 TTEARINLVKA--------GHGAPLLLLHGYPQTH--VMWHKIAPLL-ANNFTVVATDLRGYGDSSRPA---SVPHHINY 77 (291)
T ss_dssp CSSCEEEEEEE--------CCSSEEEEECCTTCCG--GGGTTTHHHH-TTTSEEEEECCTTSTTSCCCC---CCGGGGGG
T ss_pred cCCeEEEEEEc--------CCCCeEEEECCCCCCH--HHHHHHHHHH-hCCCEEEEEcCCCCCCCCCCC---CCcccccc
Confidence 47878775431 2346789999987643 4455555555 468999999999999754321 10000113
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCC
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVP 608 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p 608 (728)
+.+++.+.+..+++.- ..+++.++|||+||.++..++.++|++++++|+..+
T Consensus 78 ~~~~~~~~~~~~~~~l--~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (291)
T 3qyj_A 78 SKRVMAQDQVEVMSKL--GYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDI 129 (291)
T ss_dssp SHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred CHHHHHHHHHHHHHHc--CCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECC
Confidence 4555555554444432 235799999999999999999999999999998764
No 255
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.80 E-value=8.5e-09 Score=116.59 Aligned_cols=116 Identities=16% Similarity=0.009 Sum_probs=79.5
Q ss_pred CCCccEEEEEcCCCCC---CcCcccHHHHHHHHH-CCeEEEEEcCCC-CCCCCC---cccc-ccccCCCCCcHHHHHHHH
Q 004839 493 ENQNPGLLHGHGAYGE---LLDKRWRSELKSLLD-RGWVVAFADVRG-GGGGGK---KWHH-DGRRTKKLNSIKDFISCA 563 (728)
Q Consensus 493 ~~~~P~vv~~hGg~~~---~~~~~~~~~~~~l~~-~Gy~v~~~d~RG-~g~~G~---~~~~-~~~~~~~~~~~~D~~~~~ 563 (728)
+++.|+||++|||.-. .....| ....|++ .|++|+.+|||- .-||.. .+.. ......+...+.|.++++
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~--~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al 215 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIY--NADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAI 215 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGG--CCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCC--CchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHH
Confidence 4568999999997422 211222 2345665 799999999993 212211 1100 111122334689999999
Q ss_pred HHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhC--CCceeEEEEeCCcc
Q 004839 564 RFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCC--PDLFRAVVLEVPFL 610 (728)
Q Consensus 564 ~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~--p~~f~a~v~~~p~~ 610 (728)
+|+.++- ..||+||.|+|+|+||.+++.++... ..+|+++|+.+|..
T Consensus 216 ~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 216 RWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 9998762 35999999999999999998888742 36899999999854
No 256
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.79 E-value=3.3e-09 Score=119.39 Aligned_cols=133 Identities=13% Similarity=0.040 Sum_probs=87.2
Q ss_pred EECCCCcEEEEEEEEcCCCC-CCCCccEEEEEcCCCC---CCcCcc----cHHHHHHHHH-CCeEEEEEcCCCCC-CCCC
Q 004839 472 VPSHDGISVPLTIIYSPKYK-KENQNPGLLHGHGAYG---ELLDKR----WRSELKSLLD-RGWVVAFADVRGGG-GGGK 541 (728)
Q Consensus 472 ~~s~dG~~i~~~l~~p~~~~-~~~~~P~vv~~hGg~~---~~~~~~----~~~~~~~l~~-~Gy~v~~~d~RG~g-~~G~ 541 (728)
+.+.|...+ .++.|.... .+++.|+||++|||.. +..... +......|+. .|++|+.+|||-+. ++..
T Consensus 75 ~~sedcl~l--nv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~ 152 (579)
T 2bce_A 75 YGNEDCLYL--NIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLS 152 (579)
T ss_dssp ESCSCCCEE--EEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCC
T ss_pred CCCCCCCEE--EEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCc
Confidence 345666554 456776542 3457899999999742 111111 1112345665 47999999999432 2222
Q ss_pred ccccccccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHh--CCCceeEEEEeCCc
Q 004839 542 KWHHDGRRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINC--CPDLFRAVVLEVPF 609 (728)
Q Consensus 542 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~--~p~~f~a~v~~~p~ 609 (728)
... ....+...+.|.+++++|+.++- ..||+||.|+|+|+||+++..++.. ...+|+++|+.+|.
T Consensus 153 ~~~---~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 153 TGD---SNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp CSS---TTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CCC---CCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 110 11112225899999999998752 3699999999999999999988764 35699999999885
No 257
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.77 E-value=3.1e-06 Score=88.89 Aligned_cols=257 Identities=12% Similarity=0.096 Sum_probs=132.9
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc----cceeeeEEEecCCCEEEEEEecCCCCcceeEEEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ----AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 201 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~----~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~ 201 (728)
...+.|||||+ |+++. ..+ +...|+++|+++|+...+.. ......++|+|||+.||.+... ...|..++
T Consensus 42 p~~~a~spdg~-l~~~~-~~~-~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~----~~~v~v~~ 114 (347)
T 3hfq_A 42 PTYLALSAKDC-LYSVD-KED-DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH----KGTAEVMK 114 (347)
T ss_dssp CCCEEECTTCE-EEEEE-EET-TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT----TTEEEEEE
T ss_pred cceEEEccCCe-EEEEE-ecC-CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC----CCEEEEEE
Confidence 44578999999 55543 322 24679999998887544322 2345678999999988876432 23566667
Q ss_pred CCCCCceeEEe--eec--C------cceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeee--c-C--Cce
Q 004839 202 IGSTDEDALLL--EES--N------ENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWE--C-E--GLA 266 (728)
Q Consensus 202 l~t~~~~~lv~--~~~--~------~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~--~-~--~~~ 266 (728)
+.....-..+. ... . ......+.++|||+ +++.... ...|++++++.. +....+.. . . ...
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~--~~~v~~~~~~~~-g~~~~~~~~~~~~g~~p~ 190 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG--SDKVYVYNVSDA-GQLSEQSVLTMEAGFGPR 190 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT--TTEEEEEEECTT-SCEEEEEEEECCTTCCEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC--CCEEEEEEECCC-CcEEEeeeEEcCCCCCCc
Confidence 64322111111 110 0 11234578999999 6655443 246778887621 33333221 1 1 112
Q ss_pred EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEE--eecCC-----CceEEEEEeeC--CEEEEEEec
Q 004839 267 HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESV--FIDDQ-----GLVVEDVDFCK--THMALILRE 337 (728)
Q Consensus 267 ~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l--i~~~~-----~~~i~~~~~~~--~~lv~~~~~ 337 (728)
...+++||+.+|+....++ ...++.++.. ...++.+ +...+ ...+..+.+.. ++|++....
T Consensus 191 ~~~~spdg~~l~v~~~~~~------~v~v~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~ 260 (347)
T 3hfq_A 191 HLVFSPDGQYAFLAGELSS------QIASLKYDTQ----TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG 260 (347)
T ss_dssp EEEECTTSSEEEEEETTTT------EEEEEEEETT----TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET
T ss_pred eEEECCCCCEEEEEeCCCC------EEEEEEecCC----CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC
Confidence 3467788888887655432 2455555432 1222211 11111 12355566554 567776665
Q ss_pred CCeeEEEEEecCCCCCCcceeecccccccccCCC-ceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEEEE
Q 004839 338 GRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPK-YVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQ 416 (728)
Q Consensus 338 ~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~-~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~ 416 (728)
++. +.+++++.. +. ...+ ..++... ....+ .++++++.+++.- ....--.+|.+|.++++++.+.
T Consensus 261 ~~~--v~v~~~~~~-g~-~~~~-----~~~~~~~~~~~~~----~~spdg~~l~v~~-~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 261 YNT--LAVFAVTAD-GH-LTLI-----QQISTEGDFPRDF----DLDPTEAFVVVVN-QNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp TTE--EEEEEECGG-GC-EEEE-----EEEECSSSCCCEE----EECTTSSEEEEEE-TTTTEEEEEEECTTTCCEEEEE
T ss_pred CCE--EEEEEECCC-Cc-EEEe-----EEEecCCCCcCeE----EECCCCCEEEEEE-cCCCcEEEEEEeCCCCeEEecc
Confidence 554 445554311 10 0011 1122111 11122 2456677665443 3333346677788889887765
Q ss_pred e
Q 004839 417 Q 417 (728)
Q Consensus 417 ~ 417 (728)
.
T Consensus 327 ~ 327 (347)
T 3hfq_A 327 K 327 (347)
T ss_dssp E
T ss_pred c
Confidence 4
No 258
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.75 E-value=9.7e-07 Score=92.82 Aligned_cols=204 Identities=12% Similarity=0.124 Sum_probs=107.2
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECC-CCceeccCc--c-----------ceeeeEEEecCCCEEEEEEecCC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLN-SGALCSKPQ--A-----------VRVSNIAWAKDGQALIYVVTDQN 191 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~-tg~~~~~~~--~-----------~~~~~~~WspDg~~l~y~~~~~~ 191 (728)
...+.|||||++|+++...++ .|.++++. +|....+.. . .....++|+|||+ ||.+...
T Consensus 88 p~~~a~spdg~~l~~~~~~~~----~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~-- 160 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHKG----TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG-- 160 (347)
T ss_dssp CSEEEEETTTTEEEEEETTTT----EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT--
T ss_pred CEEEEECCCCCEEEEEeCCCC----EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC--
Confidence 445779999999977642333 37788874 444322211 1 1244689999999 6554322
Q ss_pred CCcceeEEEECC-CCCceeE-EeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeee---cCC--
Q 004839 192 KRPYQIYCSIIG-STDEDAL-LLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWE---CEG-- 264 (728)
Q Consensus 192 ~~~~~v~~~~l~-t~~~~~l-v~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~---~~~-- 264 (728)
...|+++++. ++....+ .+..........+.|||||++|++.......-.+|.++..+ ++...+.. ...
T Consensus 161 --~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~--g~~~~~~~~~~~~~~~ 236 (347)
T 3hfq_A 161 --SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT--GAFTQLGIVKTIPADY 236 (347)
T ss_dssp --TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT--TEEEEEEEEESSCTTC
T ss_pred --CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC--CceEEeeeeeecCCCC
Confidence 2368888887 3321111 11111111223578999999988876654433444444433 33332221 111
Q ss_pred -----ceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEee-cCCCceEEEEEee--CCEEEEEEe
Q 004839 265 -----LAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFI-DDQGLVVEDVDFC--KTHMALILR 336 (728)
Q Consensus 265 -----~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~-~~~~~~i~~~~~~--~~~lv~~~~ 336 (728)
.....+++||+.||+....++ ...++.++.. +.++.+.. ...+..+..+.+. ++.|++...
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~------~v~v~~~~~~-----g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYN------TLAVFAVTAD-----GHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTT------EEEEEEECGG-----GCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCC------EEEEEEECCC-----CcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence 122456789888877654332 2445554322 22322211 1112234455555 456777766
Q ss_pred cCCeeEEEEEecCCC
Q 004839 337 EGRTYRLCSVSLPLP 351 (728)
Q Consensus 337 ~~g~~~l~~~~l~~~ 351 (728)
.++.-.++.++..++
T Consensus 306 ~~~~v~v~~~d~~tg 320 (347)
T 3hfq_A 306 NTDNATLYARDLTSG 320 (347)
T ss_dssp TTTEEEEEEECTTTC
T ss_pred CCCcEEEEEEeCCCC
Confidence 666666666676544
No 259
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.73 E-value=3.2e-06 Score=88.05 Aligned_cols=259 Identities=13% Similarity=0.085 Sum_probs=131.9
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECC--CCceeccCc---cceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLN--SGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~--tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
...+.|||||++|++.....+ .|.+++++ +|+...+.. ......++|+|||+.|+++... ...|+.+
T Consensus 40 ~~~~~~spdg~~l~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----~~~i~~~ 111 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPEF----RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN----AGNVSVT 111 (343)
T ss_dssp CCCEEECTTSSEEEEEETTTT----EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT----TTEEEEE
T ss_pred CceEEECCCCCEEEEeecCCC----eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC----CCeEEEE
Confidence 456789999999988753222 36666665 776443321 2356789999999988877532 2357777
Q ss_pred ECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEE-----eeecCC-c-eEEEEeec
Q 004839 201 IIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTL-----IWECEG-L-AHCIVEHH 273 (728)
Q Consensus 201 ~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~-----l~~~~~-~-~~~~~~~d 273 (728)
++..+.....+...........+.|+|||++|++.... ...|+++|+.+. +.... +..... . ....++++
T Consensus 112 d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~pd 188 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK--QDRICLFTVSDD-GHLVAQDPAEVTTVEGAGPRHMVFHPN 188 (343)
T ss_dssp EEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG--GTEEEEEEECTT-SCEEEEEEEEEECSTTCCEEEEEECTT
T ss_pred ECCCCccccccccccCCCCceEEEECCCCCEEEEecCC--CCEEEEEEecCC-CceeeecccccccCCCCCcceEEECCC
Confidence 77422211112111111112346899999999876633 246888888652 22322 111111 1 22456788
Q ss_pred CCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeE--Eee---cC--CCceEEEEEee--CCEEEEEEecCCeeEEE
Q 004839 274 EGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWES--VFI---DD--QGLVVEDVDFC--KTHMALILREGRTYRLC 344 (728)
Q Consensus 274 g~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--li~---~~--~~~~i~~~~~~--~~~lv~~~~~~g~~~l~ 344 (728)
|+.+|+....++ ...++.++.. .+.++. .+. .. ....+..+.+. ++.|++....++ .+.
T Consensus 189 g~~l~~~~~~~~------~i~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~--~i~ 256 (343)
T 1ri6_A 189 EQYAYCVNELNS------SVDVWELKDP----HGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTAS--LIT 256 (343)
T ss_dssp SSEEEEEETTTT------EEEEEESSCT----TSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTT--EEE
T ss_pred CCEEEEEeCCCC------EEEEEEecCC----CCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCC--EEE
Confidence 888877654332 2334443322 122321 111 11 11234455555 356766655555 455
Q ss_pred EEecCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEee
Q 004839 345 SVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQQ 418 (728)
Q Consensus 345 ~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~l~~~ 418 (728)
++++....++ ...+ ..++....... ..++.++..+.+. +.....-.+|.+|..+++.+.+...
T Consensus 257 v~d~~~~~~~-~~~~-----~~~~~~~~~~~----~~~s~dg~~l~~~-~~~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 257 VFSVSEDGSV-LSKE-----GFQPTETQPRG----FNVDHSGKYLIAA-GQKSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp EEEECTTSCC-EEEE-----EEEECSSSCCC----EEECTTSSEEEEE-CTTTCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEcCCCCc-eEEe-----eeecCCCccce----EEECCCCCEEEEe-cCCCCeEEEEEEcCCCceeeEcccc
Confidence 5555421111 0011 11222111111 2234566655543 3333444677778888887766544
No 260
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=98.72 E-value=4.3e-08 Score=102.23 Aligned_cols=177 Identities=12% Similarity=0.016 Sum_probs=107.3
Q ss_pred CcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccH-HHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCc
Q 004839 477 GISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWR-SELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNS 555 (728)
Q Consensus 477 G~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~-~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~ 555 (728)
+..+...++.|.+... +..+.||++||..+... ..|. .....|.++||.|+.+|+||+|... ....
T Consensus 13 ~~~l~~~i~~p~~~~~-~~~~~VvllHG~~~~~~-~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~-----------~~~~ 79 (317)
T 1tca_A 13 KSVLDAGLTCQGASPS-SVSKPILLVPGTGTTGP-QSFDSNWIPLSTQLGYTPCWISPPPFMLND-----------TQVN 79 (317)
T ss_dssp HHHHHHTEEETTBCTT-SCSSEEEEECCTTCCHH-HHHTTTHHHHHHTTTCEEEEECCTTTTCSC-----------HHHH
T ss_pred HHHHhheeeCCCCCCC-CCCCeEEEECCCCCCcc-hhhHHHHHHHHHhCCCEEEEECCCCCCCCc-----------HHHH
Confidence 3344455666765532 33466899999765431 1255 6678888899999999999976311 0124
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCC---CceeEEEEeCCcccchhhccC-CCCCCCccccccc
Q 004839 556 IKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCP---DLFRAVVLEVPFLDATNTLLY-PILPLIAADYEEF 631 (728)
Q Consensus 556 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p---~~f~a~v~~~p~~d~~~~~~~-~~~~~~~~~~~~~ 631 (728)
.+++.+.++++.++. ..+++.++|||+||.++.+++.++| ++++++|+.+|..+-...... ...........+.
T Consensus 80 ~~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 157 (317)
T 1tca_A 80 TEYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQQ 157 (317)
T ss_dssp HHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHHTTCBCHHHHHT
T ss_pred HHHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhhhhhhcCchHHhh
Confidence 577778888887652 2378999999999999998888765 789999999886543211000 0000000000000
Q ss_pred CCCCCHHHHHHHHccCcccccccCCCCCeEEEEcCCCCCCCHHH
Q 004839 632 GYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWE 675 (728)
Q Consensus 632 g~p~~~~~~~~~~~~sP~~~i~~~~~~P~lli~g~~D~~Vp~~~ 675 (728)
.+. ....+.+..... .. ...|.++|++..|..|++.+
T Consensus 158 -~~~-s~f~~~L~~~~~----~~-~~vp~~~i~g~~D~iV~p~~ 194 (317)
T 1tca_A 158 -TTG-SALTTALRNAGG----LT-QIVPTTNLYSATDEIVQPQV 194 (317)
T ss_dssp -BTT-CHHHHHHHHTTT----TB-CSSCEEEEECTTCSSSCCCC
T ss_pred -CcC-cHHHHHHHhcCC----CC-CCCCEEEEEeCCCCeECCcc
Confidence 001 011222221110 01 36789999999999998776
No 261
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.71 E-value=1.3e-08 Score=111.14 Aligned_cols=112 Identities=13% Similarity=0.012 Sum_probs=81.0
Q ss_pred CCccEEEEEcCCCCCCcCcccHH-HHHHHHHC-CeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCC
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRS-ELKSLLDR-GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEI 571 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~-~~~~l~~~-Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 571 (728)
...|+||++||..+.. ...|.. ....|+++ ||.|+++|+||+|... +.... ..-....+|+.+.+++|.++..
T Consensus 68 ~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~--~~~~~--~~~~~~~~dl~~li~~L~~~~g 142 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRRGSRTE--YTQAS--YNTRVVGAEIAFLVQVLSTEMG 142 (452)
T ss_dssp TTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHHHHSSC--HHHHH--HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechhcccCc--hhHhH--hhHHHHHHHHHHHHHHHHHhcC
Confidence 3458999999976644 234655 45677764 9999999999998643 11110 0001234566777777765434
Q ss_pred CCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 572 VKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 572 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
++.+++.++|||+||.+++.++.++|++++++|+..|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 143 YSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 567899999999999999999999999999999987754
No 262
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.71 E-value=3.7e-08 Score=102.67 Aligned_cols=104 Identities=19% Similarity=0.185 Sum_probs=81.1
Q ss_pred CccEEEEEcCCCCCCcC----cccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcC
Q 004839 495 QNPGLLHGHGAYGELLD----KRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKE 570 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~----~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 570 (728)
..|.||++||..+.... ..|....+.|.++||.|+.+|+||.|..... ....+++.+.++.++++-
T Consensus 7 ~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~----------~~~~~~l~~~i~~~l~~~ 76 (320)
T 1ys1_X 7 TRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGP----------NGRGEQLLAYVKTVLAAT 76 (320)
T ss_dssp CSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSST----------TSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC----------CCCHHHHHHHHHHHHHHh
Confidence 45779999997654321 4567788999999999999999998864211 235677777777666542
Q ss_pred CCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 571 IVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 571 ~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
+.+++.++|||+||.++..++.++|++++++|+.++..
T Consensus 77 --~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 77 --GATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp --CCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred --CCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 34689999999999999999999999999999998854
No 263
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.70 E-value=2.4e-08 Score=102.67 Aligned_cols=101 Identities=16% Similarity=0.095 Sum_probs=79.1
Q ss_pred CccEEEEEcCCCCCCc---CcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCC
Q 004839 495 QNPGLLHGHGAYGELL---DKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEI 571 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~---~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 571 (728)
..|.||++||..+... ...|....+.|.++||.|+.+|+||.|... ...+++.+.++.++++-
T Consensus 6 ~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~-------------~~~~~~~~~i~~~~~~~- 71 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-------------VRGEQLLQQVEEIVALS- 71 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-------------HHHHHHHHHHHHHHHHH-
T ss_pred CCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch-------------hhHHHHHHHHHHHHHHh-
Confidence 3577999999766532 235777888999999999999999987531 24566666666666542
Q ss_pred CCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 572 VKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 572 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
+.+++.++|||+||.++..++.++|++++++|+.++..
T Consensus 72 -~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 72 -GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp -CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred -CCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 34689999999999999999999999999999998854
No 264
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.66 E-value=3e-05 Score=83.90 Aligned_cols=199 Identities=8% Similarity=-0.013 Sum_probs=122.1
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|+|||+.++-. ..++ .|+++|+++++.+.... ......++|+||++.|+++... ...|+++|+
T Consensus 171 ~v~~~~~~~~~~~~~s~-~~d~----~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~i~~~d~ 241 (433)
T 3bws_A 171 FVETISIPEHNELWVSQ-MQAN----AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI----SEDISVIDR 241 (433)
T ss_dssp EEEEEEEGGGTEEEEEE-GGGT----EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT----TTEEEEEET
T ss_pred ceeEEEEcCCCEEEEEE-CCCC----EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC----CCcEEEEEC
Confidence 56678899999876554 3333 49999999987654322 3356789999999988777432 337999999
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCC-----CceEEEEEeCCCCCCCeEEeee-cCCceEEEEeecCCE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFST-----TSSKVFLINAADPFSGLTLIWE-CEGLAHCIVEHHEGF 276 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~-----~~~~l~~~dl~~~~~~~~~l~~-~~~~~~~~~~~dg~~ 276 (728)
.+++. ...+.. ......+.++|||++|++..... ....|+++|+.+ ++...... ........++++++.
T Consensus 242 ~~~~~-~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~g~~ 316 (433)
T 3bws_A 242 KTKLE-IRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK--EKLIDTIGPPGNKRHIVSGNTENK 316 (433)
T ss_dssp TTTEE-EEECCC--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT--TEEEEEEEEEECEEEEEECSSTTE
T ss_pred CCCcE-EEEecC--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC--CcEEeeccCCCCcceEEECCCCCE
Confidence 77642 112221 22245688999999998877533 246899999987 33322221 122223456788888
Q ss_pred EEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC--CEEEEEEecCCe------------eE
Q 004839 277 LYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK--THMALILREGRT------------YR 342 (728)
Q Consensus 277 l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~--~~lv~~~~~~g~------------~~ 342 (728)
+++....++ .|...++. . .+....+.. ...+..+.+.. +.+++....++. ..
T Consensus 317 l~~~~~~~~--------~v~v~d~~-~---~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~ 382 (433)
T 3bws_A 317 IYVSDMCCS--------KIEVYDLK-E---KKVQKSIPV--FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK 382 (433)
T ss_dssp EEEEETTTT--------EEEEEETT-T---TEEEEEEEC--SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE
T ss_pred EEEEecCCC--------EEEEEECC-C---CcEEEEecC--CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE
Confidence 887755442 35555554 1 222223332 23456666664 466666554432 27
Q ss_pred EEEEecCCC
Q 004839 343 LCSVSLPLP 351 (728)
Q Consensus 343 l~~~~l~~~ 351 (728)
|+++++.++
T Consensus 383 v~~~d~~~~ 391 (433)
T 3bws_A 383 VYVIDTTTD 391 (433)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 888987653
No 265
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.66 E-value=9.4e-08 Score=98.23 Aligned_cols=113 Identities=10% Similarity=0.043 Sum_probs=80.4
Q ss_pred EEEcCCCCCCCCccEEEEEcCCCCCCcCcccH-HHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHH
Q 004839 484 IIYSPKYKKENQNPGLLHGHGAYGELLDKRWR-SELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISC 562 (728)
Q Consensus 484 l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~-~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~ 562 (728)
++.|.. .+.+..+.||++||..+.. ...|. .....|.++||.|+.+|++|+|... .....+++.+.
T Consensus 54 i~~p~~-~~~~~~~pVVLvHG~~~~~-~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~-----------~~~~~~~la~~ 120 (316)
T 3icv_A 54 LTCQGA-SPSSVSKPILLVPGTGTTG-PQSFDSNWIPLSAQLGYTPCWISPPPFMLND-----------TQVNTEYMVNA 120 (316)
T ss_dssp EEETTB-BTTBCSSEEEEECCTTCCH-HHHHTTTHHHHHHHTTCEEEEECCTTTTCSC-----------HHHHHHHHHHH
T ss_pred EeCCCC-CCCCCCCeEEEECCCCCCc-HHHHHHHHHHHHHHCCCeEEEecCCCCCCCc-----------HHHHHHHHHHH
Confidence 455533 2333456688999975432 13455 6778899999999999999986321 01245677777
Q ss_pred HHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC---CCceeEEEEeCCccc
Q 004839 563 ARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC---PDLFRAVVLEVPFLD 611 (728)
Q Consensus 563 ~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~---p~~f~a~v~~~p~~d 611 (728)
++.+.+.- ..+++.++||||||.++.+++..+ +++++.+|+.+|...
T Consensus 121 I~~l~~~~--g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 121 ITTLYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHh--CCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 88877652 236899999999999998877765 589999999988654
No 266
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.66 E-value=2.2e-08 Score=109.38 Aligned_cols=111 Identities=14% Similarity=-0.007 Sum_probs=79.8
Q ss_pred CccEEEEEcCCCCCCcCcccHH-HHHHHHHC-CeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRS-ELKSLLDR-GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIV 572 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~-~~~~l~~~-Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 572 (728)
..|+||++||..+.. ...|.. ....|+++ ||.|+++|+||+|... +.... ..-....+|+.+.+++|.++..+
T Consensus 69 ~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~--~~~~~--~~~~~~~~dl~~~i~~L~~~~g~ 143 (452)
T 1w52_X 69 SRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSSGAKAE--YTQAV--QNIRIVGAETAYLIQQLLTELSY 143 (452)
T ss_dssp TSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHHHHTSC--HHHHH--HHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEecccccccc--cHHHH--HhHHHHHHHHHHHHHHHHHhcCC
Confidence 458999999976543 234555 55777765 9999999999998652 11110 00011235666777777654334
Q ss_pred CCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 573 KEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 573 d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
+.+++.++|||+||.+++.++.++|++++++|+..|..
T Consensus 144 ~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 144 NPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 57899999999999999999999999999999987754
No 267
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.65 E-value=8e-05 Score=78.49 Aligned_cols=257 Identities=12% Similarity=0.052 Sum_probs=124.5
Q ss_pred eeceeeCCCCCEEEEEEEcC-CCcEEEEEEEECCCCceeccCc-c---ceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 126 EELSEVSPDHKFLAYTMYDK-DNDYFTLSVRNLNSGALCSKPQ-A---VRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~-g~e~~~l~v~dl~tg~~~~~~~-~---~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
...+.|||||++|++....+ +.....+|.++.++|+...+.. . .....+++ ||+.|+.+... ...|..+
T Consensus 52 p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~----~~~v~~~ 125 (361)
T 3scy_A 52 PSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYS----GGSITVF 125 (361)
T ss_dssp CCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETT----TTEEEEE
T ss_pred CceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECC----CCEEEEE
Confidence 34567999999997765321 2335556777777777554432 1 12334455 89888766422 3467777
Q ss_pred ECCCCC-ce---eEE-eeecC-------cceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCC----C-eE------
Q 004839 201 IIGSTD-ED---ALL-LEESN-------ENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFS----G-LT------ 257 (728)
Q Consensus 201 ~l~t~~-~~---~lv-~~~~~-------~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~----~-~~------ 257 (728)
++.+.. .. ..+ ..... ......+.+||||++|++...... .+++++++...+ + +.
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~--~v~v~~~~~~~~~~~~~~l~~~~~~~ 203 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTD--QIHKFNINPNANADNKEKFLTKGTPE 203 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTT--EEEEEEECTTCCTTTCCCCEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCC--EEEEEEEcCCCCcccccceeeccccc
Confidence 876432 11 111 11100 111245789999999988765433 455555443222 2 21
Q ss_pred Eee-ecC-CceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEE--eec--CCCceEEEEEee--CC
Q 004839 258 LIW-ECE-GLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESV--FID--DQGLVVEDVDFC--KT 329 (728)
Q Consensus 258 ~l~-~~~-~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l--i~~--~~~~~i~~~~~~--~~ 329 (728)
.+. ... ......+++||+.+|+....++ ...++.++ . +.++.+ +.. ........+.+. ++
T Consensus 204 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~------~v~v~~~~---~---g~~~~~~~~~~~~~~~~~~~~i~~spdg~ 271 (361)
T 3scy_A 204 AFKVAPGSGPRHLIFNSDGKFAYLINEIGG------TVIAFRYA---D---GMLDEIQTVAADTVNAQGSGDIHLSPDGK 271 (361)
T ss_dssp EEECCTTCCEEEEEECTTSSEEEEEETTTC------EEEEEEEE---T---TEEEEEEEEESCSSCCCCEEEEEECTTSS
T ss_pred ceecCCCCCCeEEEEcCCCCEEEEEcCCCC------eEEEEEec---C---CceEEeEEEecCCCCCCCcccEEECCCCC
Confidence 111 112 2233466788888877654332 23344433 1 222211 111 111223455554 45
Q ss_pred EEEEEEec-CCeeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECC
Q 004839 330 HMALILRE-GRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLS 408 (728)
Q Consensus 330 ~lv~~~~~-~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~ 408 (728)
+|++..+. ++.-.++.++..++. ...+ ..++.......+ .++++++.+++.. ....--.+|.+|.+
T Consensus 272 ~l~v~~~~~~~~i~v~~~~~~~g~---~~~~-----~~~~~g~~~~~~----~~spdg~~l~~~~-~~~~~v~v~~~d~~ 338 (361)
T 3scy_A 272 YLYASNRLKADGVAIFKVDETNGT---LTKV-----GYQLTGIHPRNF----IITPNGKYLLVAC-RDTNVIQIFERDQA 338 (361)
T ss_dssp EEEEEECSSSCEEEEEEECTTTCC---EEEE-----EEEECSSCCCEE----EECTTSCEEEEEE-TTTTEEEEEEECTT
T ss_pred EEEEECCCCCCEEEEEEEcCCCCc---EEEe-----eEecCCCCCceE----EECCCCCEEEEEE-CCCCCEEEEEEECC
Confidence 66665554 344444444322221 0001 112211111112 2456677665543 23333466778888
Q ss_pred CCeEEEE
Q 004839 409 YGKWNII 415 (728)
Q Consensus 409 ~~~~~~l 415 (728)
+++++.+
T Consensus 339 ~g~~~~~ 345 (361)
T 3scy_A 339 TGLLTDI 345 (361)
T ss_dssp TCCEEEC
T ss_pred CCcEeec
Confidence 8876543
No 268
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.65 E-value=3.6e-08 Score=111.19 Aligned_cols=129 Identities=19% Similarity=0.136 Sum_probs=85.1
Q ss_pred CCCCcEEEEEEEEcCCCC---CCCCccEEEEEcCCCCCC-cCcccHHHHHHHHHC-CeEEEEEcCCCCC-CCCCcccccc
Q 004839 474 SHDGISVPLTIIYSPKYK---KENQNPGLLHGHGAYGEL-LDKRWRSELKSLLDR-GWVVAFADVRGGG-GGGKKWHHDG 547 (728)
Q Consensus 474 s~dG~~i~~~l~~p~~~~---~~~~~P~vv~~hGg~~~~-~~~~~~~~~~~l~~~-Gy~v~~~d~RG~g-~~G~~~~~~~ 547 (728)
+.|. +...++.|.... .+++.|+||++|||.-.. ....|.. ..|+++ |++|+.+|||-+. |+...-.
T Consensus 108 sEdc--L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~--- 180 (574)
T 3bix_A 108 SEDC--LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGD--- 180 (574)
T ss_dssp CSCC--CEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSS---
T ss_pred CCcC--CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCC---
Confidence 4455 444567776532 235689999999973221 1122322 456665 6999999999532 2211100
Q ss_pred ccCCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEeCccHHHHHHHHHhCC---CceeEEEEeCCc
Q 004839 548 RRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCCP---DLFRAVVLEVPF 609 (728)
Q Consensus 548 ~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~~~~~~~~~~p---~~f~a~v~~~p~ 609 (728)
....+...+.|.+++++|+.++- ..||+||.|+|.|+||.+++.++.... .+|+++|+.+|.
T Consensus 181 ~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 181 QAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 11123346899999999998752 359999999999999999998887532 689999998863
No 269
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.64 E-value=2.6e-06 Score=90.63 Aligned_cols=199 Identities=9% Similarity=0.045 Sum_probs=114.7
Q ss_pred eceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCC
Q 004839 127 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGST 205 (728)
Q Consensus 127 ~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~ 205 (728)
..++|||||++||.... +....|+|+|+++++.+.... ...+..++|+|||+.|+... + ..+.+++..++
T Consensus 137 ~~v~fSpDg~~la~as~---~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s-~-----~~~~~~~~~~~ 207 (365)
T 4h5i_A 137 KLVYISREGTVAAIASS---KVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT-G-----SSLEVISTVTG 207 (365)
T ss_dssp EEEEECTTSSCEEEEES---CSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC-S-----SCEEEEETTTC
T ss_pred EEEEEcCCCCEEEEEEC---CCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc-c-----eeEEEEEeccC
Confidence 35789999999988642 222469999999998665432 34578899999999887763 2 24666676665
Q ss_pred CceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCC-ceEEEEEeCCCCCCCe---EEeeecCCce-EEEEeecCCEEEEE
Q 004839 206 DEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT-SSKVFLINAADPFSGL---TLIWECEGLA-HCIVEHHEGFLYLF 280 (728)
Q Consensus 206 ~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~l~~~dl~~~~~~~---~~l~~~~~~~-~~~~~~dg~~l~~~ 280 (728)
.................+.|+|||++++..+.... ...++..++....... ..+......+ ...+++||+.|+.-
T Consensus 208 ~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 208 SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA 287 (365)
T ss_dssp CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence 42111111112223456889999999887766543 3456777765522111 1222222333 23567888877665
Q ss_pred EcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecC
Q 004839 281 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLP 349 (728)
Q Consensus 281 tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~ 349 (728)
+... ..+|+ ++. . ......+ .......+..+.+.. +.+++....++.-+| ++++
T Consensus 288 s~D~-------~V~iw--d~~-~--~~~~~~~-~~gH~~~V~~v~fSpdg~~laS~S~D~tvrv--w~ip 342 (365)
T 4h5i_A 288 SNDN-------SIALV--KLK-D--LSMSKIF-KQAHSFAITEVTISPDSTYVASVSAANTIHI--IKLP 342 (365)
T ss_dssp ETTS-------CEEEE--ETT-T--TEEEEEE-TTSSSSCEEEEEECTTSCEEEEEETTSEEEE--EECC
T ss_pred cCCC-------EEEEE--ECC-C--CcEEEEe-cCcccCCEEEEEECCCCCEEEEEeCCCeEEE--EEcC
Confidence 4432 23444 443 1 1111122 122344577777775 456667777775444 5544
No 270
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.63 E-value=2.3e-05 Score=83.53 Aligned_cols=119 Identities=13% Similarity=0.014 Sum_probs=73.9
Q ss_pred eCCCCCEEEEEEEcCCCcEE-EEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecC-----CCCcceeEEEECCC
Q 004839 131 VSPDHKFLAYTMYDKDNDYF-TLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQ-----NKRPYQIYCSIIGS 204 (728)
Q Consensus 131 ~SPDG~~lA~~~~~~g~e~~-~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~-----~~~~~~v~~~~l~t 204 (728)
.+||+++ +|..+..+.... .|+++|+++++.+.....+....+.+||||+.||++.... ..+...|..+|+.+
T Consensus 28 ~~~~~~~-~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 28 PGADGRR-SYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCCE-EEEeCCcccCCccEEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 4689965 677664122111 7999999999876433333333999999999998874311 11234688999877
Q ss_pred CC-ceeEEee-ecC---cceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCC
Q 004839 205 TD-EDALLLE-ESN---ENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 205 ~~-~~~lv~~-~~~---~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
.+ ...+... ... ...-.++.+||||++|++..... .+.|.++| +++
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~-~~~v~viD-~t~ 157 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA-GPAVGLVV-QGG 157 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC-CCeEEEEE-CCC
Confidence 64 2222211 000 00112468999999998875432 45799999 873
No 271
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.60 E-value=2.9e-06 Score=88.40 Aligned_cols=203 Identities=9% Similarity=0.017 Sum_probs=110.2
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCc---eeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA---LCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 201 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~---~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~ 201 (728)
...+.|||||++|+++...++ .|+++|+..|+ ...... ......++|+|||+.||.+... ...|++++
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----~~~v~~~d 157 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAG----NVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK----QDRICLFT 157 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTT----EEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG----GTEEEEEE
T ss_pred CcEEEEcCCCCEEEEEecCCC----eEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCC----CCEEEEEE
Confidence 456789999999887753233 37888884332 222211 2346778999999988776422 24688888
Q ss_pred CCC-CCceeE---EeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEE---eeecCCc-------eE
Q 004839 202 IGS-TDEDAL---LLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTL---IWECEGL-------AH 267 (728)
Q Consensus 202 l~t-~~~~~l---v~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~---l~~~~~~-------~~ 267 (728)
+.+ +....+ ............+.++|||++|++..... ..+.+++++...+.... +...... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~--~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN--SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAAD 235 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT--TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC--CEEEEEEecCCCCcEEEEeeccccCccccccCCccc
Confidence 876 332111 11111122234578999999988776433 46777787532233322 2111111 12
Q ss_pred EEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEE--eecCCCceEEEEEee--CCEEEEEEecCCeeEE
Q 004839 268 CIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESV--FIDDQGLVVEDVDFC--KTHMALILREGRTYRL 343 (728)
Q Consensus 268 ~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l--i~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l 343 (728)
..++++|+.||+....++ ...++.++.+ .+.++.+ +.... .+..+.+. ++.|++....++.-.+
T Consensus 236 i~~s~dg~~l~v~~~~~~------~i~v~d~~~~----~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~v~v 303 (343)
T 1ri6_A 236 IHITPDGRHLYACDRTAS------LITVFSVSED----GSVLSKEGFQPTET--QPRGFNVDHSGKYLIAAGQKSHHISV 303 (343)
T ss_dssp EEECTTSSEEEEEETTTT------EEEEEEECTT----SCCEEEEEEEECSS--SCCCEEECTTSSEEEEECTTTCEEEE
T ss_pred eEECCCCCEEEEEecCCC------EEEEEEEcCC----CCceEEeeeecCCC--ccceEEECCCCCEEEEecCCCCeEEE
Confidence 456788888876543332 2344444321 1223322 22211 14445554 4566666555666666
Q ss_pred EEEecCC
Q 004839 344 CSVSLPL 350 (728)
Q Consensus 344 ~~~~l~~ 350 (728)
+.++..+
T Consensus 304 ~~~d~~~ 310 (343)
T 1ri6_A 304 YEIVGEQ 310 (343)
T ss_dssp EEEETTT
T ss_pred EEEcCCC
Confidence 6666543
No 272
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.57 E-value=0.00013 Score=76.35 Aligned_cols=199 Identities=8% Similarity=-0.045 Sum_probs=116.2
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..++|||||++||... .+|. |+|+|+.+++.+.... ...+..++|+||++.|+.... ...|...++
T Consensus 34 ~v~~~~~s~~~~~l~~~~-~dg~----i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-----dg~i~iwd~ 103 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCS-KDSS----ASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA-----DYSIKLWDV 103 (369)
T ss_dssp CEEEEEECTTSCEEEEEE-SSSC----EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-----TTEEEEEET
T ss_pred eEEEEEEcCCCCEEEEEe-CCCE----EEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC-----CCeEEEEEC
Confidence 577888999999998874 4554 9999999998665432 446788999999998876643 236888899
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcC--CCceEEEEEeCCCCCCC----------eEEeeecCC--c-eE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFS--TTSSKVFLINAADPFSG----------LTLIWECEG--L-AH 267 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~--~~~~~l~~~dl~~~~~~----------~~~l~~~~~--~-~~ 267 (728)
.+++... .+. .......+.|+|+|++|+..... .....|+++|+...... ...+..... . ..
T Consensus 104 ~~~~~~~-~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 104 SNGQCVA-TWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp TTCCEEE-EEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred CCCcEEE-Eee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 8765222 222 22234568999999999887764 12245777776543211 111111111 1 22
Q ss_pred EEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEE
Q 004839 268 CIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSV 346 (728)
Q Consensus 268 ~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~ 346 (728)
..+++++..|+..+.. ..|...++. .. ......+.. ....+..+.+.. +.++++...+| .|.++
T Consensus 181 ~~~~~~~~~l~~~~~d---------g~i~i~d~~-~~--~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~--~i~v~ 245 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKD---------GKISKYDVS-NN--YEYVDSIDL-HEKSISDMQFSPDLTYFITSSRDT--NSFLV 245 (369)
T ss_dssp EEECGGGCEEEEEETT---------SEEEEEETT-TT--TEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTS--EEEEE
T ss_pred EEEcCCCCEEEEEcCC---------CEEEEEECC-CC--cEeEEEEec-CCCceeEEEECCCCCEEEEecCCc--eEEEE
Confidence 3455777766654332 235555554 10 111122222 234566677664 33444545555 46677
Q ss_pred ecCCC
Q 004839 347 SLPLP 351 (728)
Q Consensus 347 ~l~~~ 351 (728)
++.++
T Consensus 246 d~~~~ 250 (369)
T 3zwl_B 246 DVSTL 250 (369)
T ss_dssp ETTTC
T ss_pred ECCCC
Confidence 77653
No 273
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.55 E-value=4.4e-06 Score=87.28 Aligned_cols=115 Identities=11% Similarity=0.095 Sum_probs=73.3
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cc-------eeeeEEEecCCCEEEEEEecC---C---
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AV-------RVSNIAWAKDGQALIYVVTDQ---N--- 191 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~-------~~~~~~WspDg~~l~y~~~~~---~--- 191 (728)
...+.|||||++++++....+ .|+++|+++++.+.... .. ....++|+|||+.|++...+. .
T Consensus 45 ~~~~~~s~dg~~~~v~~~~~~----~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNHYG----DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp SCEEEECTTSSEEEEEETTTT----EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CceeEECCCCCEEEEEeCCCC----cEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccc
Confidence 345679999998877642222 49999999998654322 11 146789999999998876430 0
Q ss_pred -CCcceeEEEECCCCCce--eEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCC
Q 004839 192 -KRPYQIYCSIIGSTDED--ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 192 -~~~~~v~~~~l~t~~~~--~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
.....|+++|+.+++.. ...+..+. ....+.++|||+ |++.. .+|+++|+.++
T Consensus 121 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~-l~~~~-----~~i~~~d~~~~ 176 (349)
T 1jmx_B 121 VVKPPRLEVFSTADGLEAKPVRTFPMPR--QVYLMRAADDGS-LYVAG-----PDIYKMDVKTG 176 (349)
T ss_dssp EECCCEEEEEEGGGGGGBCCSEEEECCS--SCCCEEECTTSC-EEEES-----SSEEEECTTTC
T ss_pred ccCCCeEEEEECCCccccceeeeccCCC--cccceeECCCCc-EEEcc-----CcEEEEeCCCC
Confidence 01247999999775311 11222222 223467999999 66632 23999999873
No 274
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.54 E-value=7.2e-06 Score=86.64 Aligned_cols=159 Identities=11% Similarity=0.103 Sum_probs=88.0
Q ss_pred eceeeCCCCCEEEEEEEcCCCcEEEEEEEECC--CC----c-ee--------ccCccceeeeEEEecCCCEEEEEEecCC
Q 004839 127 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLN--SG----A-LC--------SKPQAVRVSNIAWAKDGQALIYVVTDQN 191 (728)
Q Consensus 127 ~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~--tg----~-~~--------~~~~~~~~~~~~WspDg~~l~y~~~~~~ 191 (728)
..+.|||||++|+++ +.. +.. |++++++ ++ + .. ..........++|+|||+.||.+...
T Consensus 158 ~~~~~spdg~~l~~~-~~~-~~~--v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-- 231 (361)
T 3scy_A 158 HCVRITPDGKYLLAD-DLG-TDQ--IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-- 231 (361)
T ss_dssp EEEEECTTSSEEEEE-ETT-TTE--EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT--
T ss_pred eEEEECCCCCEEEEE-eCC-CCE--EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC--
Confidence 347899999998776 433 333 5555554 44 2 11 11112345679999999988776422
Q ss_pred CCcceeEEEECCCCCceeE--EeeecC-cceEEEEEEcCCCCEEEEEEcC-CCceEEEEEeCCCCCCCeEEeee--c-CC
Q 004839 192 KRPYQIYCSIIGSTDEDAL--LLEESN-ENVYVNIRHTKDFHFVCVHTFS-TTSSKVFLINAADPFSGLTLIWE--C-EG 264 (728)
Q Consensus 192 ~~~~~v~~~~l~t~~~~~l--v~~~~~-~~~~~~~~~SpDg~~l~~~~~~-~~~~~l~~~dl~~~~~~~~~l~~--~-~~ 264 (728)
...|.++++.++....+ +..... ......+.+||||++|++.... ...-.+|.++.++ +..+.+.. . ..
T Consensus 232 --~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~--g~~~~~~~~~~g~~ 307 (361)
T 3scy_A 232 --GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN--GTLTKVGYQLTGIH 307 (361)
T ss_dssp --TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT--CCEEEEEEEECSSC
T ss_pred --CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC--CcEEEeeEecCCCC
Confidence 33677777765431111 111111 1112467899999998776654 3333445455444 34333321 1 12
Q ss_pred ceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCC
Q 004839 265 LAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVD 301 (728)
Q Consensus 265 ~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~ 301 (728)
.....+++||+.||+.....+ ...++.++.+
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~------~v~v~~~d~~ 338 (361)
T 3scy_A 308 PRNFIITPNGKYLLVACRDTN------VIQIFERDQA 338 (361)
T ss_dssp CCEEEECTTSCEEEEEETTTT------EEEEEEECTT
T ss_pred CceEEECCCCCEEEEEECCCC------CEEEEEEECC
Confidence 234567888887776543332 3567777654
No 275
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.54 E-value=3.8e-07 Score=98.90 Aligned_cols=111 Identities=16% Similarity=0.127 Sum_probs=73.4
Q ss_pred ccEEEEEcCCCCCCcCccc--HHHHHHHHH-CCeEEEEEcCCCCCCCCCcccccc---ccCCC----CCcHHHHHHHHHH
Q 004839 496 NPGLLHGHGAYGELLDKRW--RSELKSLLD-RGWVVAFADVRGGGGGGKKWHHDG---RRTKK----LNSIKDFISCARF 565 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~~~--~~~~~~l~~-~Gy~v~~~d~RG~g~~G~~~~~~~---~~~~~----~~~~~D~~~~~~~ 565 (728)
.|+ ++.|||.+... ..+ ......||+ .|+.|+.+|.||+|.+... .... ....+ ...++|+...+++
T Consensus 39 ~Pi-~l~~Ggeg~~~-~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~-~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~ 115 (446)
T 3n2z_B 39 GSI-LFYTGNEGDII-WFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPF-GDNSFKDSRHLNFLTSEQALADFAELIKH 115 (446)
T ss_dssp CEE-EEEECCSSCHH-HHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTT-GGGGGSCTTTSTTCSHHHHHHHHHHHHHH
T ss_pred CCE-EEEeCCCCcch-hhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCC-CccccccchhhccCCHHHHHHHHHHHHHH
Confidence 475 55588877432 111 123445665 4899999999999976321 1100 01111 2245677777777
Q ss_pred HHHc-CCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCc
Q 004839 566 LIEK-EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 609 (728)
Q Consensus 566 l~~~-~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~ 609 (728)
+..+ ......++.++||||||.++++++.++|+++.++|+.++.
T Consensus 116 l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssap 160 (446)
T 3n2z_B 116 LKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAP 160 (446)
T ss_dssp HHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCC
T ss_pred HHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccc
Confidence 7654 1223358999999999999999999999999999987643
No 276
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.53 E-value=2.4e-05 Score=87.84 Aligned_cols=260 Identities=13% Similarity=0.110 Sum_probs=142.2
Q ss_pred eeceeeCC----CCCEEEEEEEcCCCcEEEEEEEECCCCceeccCcc-------------ceeeeEEEecCCCEEEEEEe
Q 004839 126 EELSEVSP----DHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA-------------VRVSNIAWAKDGQALIYVVT 188 (728)
Q Consensus 126 ~~~~~~SP----DG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~-------------~~~~~~~WspDg~~l~y~~~ 188 (728)
...+.+|| ||++|+......+ +|.|+|.++++.+..... .....+.+|||++.++++..
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~~~----~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYWPP----QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEESS----EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cceEEeCCCcCCCCCEEEEEEccCC----eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 45678999 9999876643333 488999999986653211 14567899999998777642
Q ss_pred cCCCCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeec----CC
Q 004839 189 DQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWEC----EG 264 (728)
Q Consensus 189 ~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~----~~ 264 (728)
...+|+.+|+.+.+.-. +.......+..++.|+|||+++++.... .+.|.++|+++ ++.....+. ..
T Consensus 300 ----~~g~i~vvd~~~~~~l~-~~~i~~~~~~~~~~~spdg~~l~va~~~--~~~v~v~D~~t--g~l~~~i~~g~~ph~ 370 (543)
T 1nir_A 300 ----ETGKVLLVNYKDIDNLT-VTSIGAAPFLHDGGWDSSHRYFMTAANN--SNKVAVIDSKD--RRLSALVDVGKTPHP 370 (543)
T ss_dssp ----TTTEEEEEECTTSSSCE-EEEEECCSSCCCEEECTTSCEEEEEEGG--GTEEEEEETTT--TEEEEEEECSSSBCC
T ss_pred ----CCCeEEEEEecCCCcce-eEEeccCcCccCceECCCCCEEEEEecC--CCeEEEEECCC--CeEEEeeccCCCCCC
Confidence 24589999987754211 1111112333457899999998776653 34688899987 333332221 11
Q ss_pred -ceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCC-CCCCCCCeEE--eecC-CCceEEEEEeeCCEEEEEEecCC
Q 004839 265 -LAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDA-SFPSRTWESV--FIDD-QGLVVEDVDFCKTHMALILREGR 339 (728)
Q Consensus 265 -~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~l--i~~~-~~~~i~~~~~~~~~lv~~~~~~g 339 (728)
.....++++++.+|+..+.+.+ .|..++.+. .-....|+.+ +... .....-.+...+++|++...-+.
T Consensus 371 g~g~~~~~p~~g~~~~s~~~~d~-------~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~ 443 (543)
T 1nir_A 371 GRGANFVHPKYGPVWSTSHLGDG-------SISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNP 443 (543)
T ss_dssp TTCEEEEETTTEEEEEEEBSSSS-------EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCS
T ss_pred CCCcccCCCCCccEEEeccCCCc-------eEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCC
Confidence 1112245666776654443321 244444430 0011226532 2221 11111123344567776543222
Q ss_pred ----eeEEEEEecCCCCCCcceeecccccccc----cCCCceeeeecCCCccCCCcEEEEEEcc-CCCCceEEEEECCCC
Q 004839 340 ----TYRLCSVSLPLPAGKGVVHLKELHPHFL----PLPKYVSQIVPGPNYDYYSSTMRFAISS-PVMPDAVVDYDLSYG 410 (728)
Q Consensus 340 ----~~~l~~~~l~~~~~~~~~~~~~~~~~~~----~~p~~~~~i~~~~~~~~~~~~~~~~~ss-~~~p~~~~~~~~~~~ 410 (728)
...|.++|+.+++.. +. ...+ .+++....+. ...++.+++.+.++.-+ -.....|..+|.+++
T Consensus 444 ~~~~~~~v~v~d~~~~~~~----~~---~~~v~~~~~~~~~~~~~~-~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 444 DARISQSVAVFDLKNLDAK----YQ---VLPIAEWADLGEGAKRVV-QPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp SHHHHTCEEEEETTCTTSC----CE---EECHHHHHCCCSSCCEEE-EEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CcccCceEEEEECCCCCCC----eE---EeechhhcccCCCCCceE-eccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence 346888998765411 00 0001 0222111111 22356788888887643 345679999999998
Q ss_pred eEE
Q 004839 411 KWN 413 (728)
Q Consensus 411 ~~~ 413 (728)
+..
T Consensus 516 ~~~ 518 (543)
T 1nir_A 516 KLK 518 (543)
T ss_dssp EEE
T ss_pred eEE
Confidence 764
No 277
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.52 E-value=1.7e-05 Score=85.90 Aligned_cols=201 Identities=9% Similarity=0.019 Sum_probs=120.0
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCC---CcceeEEEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNK---RPYQIYCSI 201 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~---~~~~v~~~~ 201 (728)
+..+.|||||++|+++...++ .|+++|+.+++.+.... ......++|+|||+.|+........ ....|++++
T Consensus 214 ~~~~~~~~~~~~l~~~~~~~~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d 289 (433)
T 3bws_A 214 SKILLYDPIRDLVYCSNWISE----DISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYS 289 (433)
T ss_dssp EEEEEEETTTTEEEEEETTTT----EEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEE
T ss_pred eeEEEEcCCCCEEEEEecCCC----cEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEE
Confidence 556789999999877643333 49999999988665433 3457789999999988887653221 245799999
Q ss_pred CCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCc-eEEEEeecCCEEEEE
Q 004839 202 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL-AHCIVEHHEGFLYLF 280 (728)
Q Consensus 202 l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~-~~~~~~~dg~~l~~~ 280 (728)
+.+++....+.. .. ....+.++|||++|++..... ..|+++|+.+ ++.....+.... ....++++|+.+++.
T Consensus 290 ~~~~~~~~~~~~-~~--~~~~~~~~~~g~~l~~~~~~~--~~v~v~d~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 362 (433)
T 3bws_A 290 MDKEKLIDTIGP-PG--NKRHIVSGNTENKIYVSDMCC--SKIEVYDLKE--KKVQKSIPVFDKPNTIALSPDGKYLYVS 362 (433)
T ss_dssp TTTTEEEEEEEE-EE--CEEEEEECSSTTEEEEEETTT--TEEEEEETTT--TEEEEEEECSSSEEEEEECTTSSEEEEE
T ss_pred CCCCcEEeeccC-CC--CcceEEECCCCCEEEEEecCC--CEEEEEECCC--CcEEEEecCCCCCCeEEEcCCCCEEEEE
Confidence 987642222211 11 234578999999988876543 4788999986 333333333222 334567888888776
Q ss_pred EcCCccC------CCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC--CEEEEEEecCCeeEE
Q 004839 281 TDAAKEG------QEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK--THMALILREGRTYRL 343 (728)
Q Consensus 281 tn~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~--~~lv~~~~~~g~~~l 343 (728)
....... ....+..|+..+.. . .+....+.. ...+..+.+.. +.|++....++.-.+
T Consensus 363 ~~~~~~~~~~~~~~g~~dg~v~~~d~~-~---~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v 427 (433)
T 3bws_A 363 CRGPNHPTEGYLKKGLVLGKVYVIDTT-T---DTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRV 427 (433)
T ss_dssp ECCCCCTTTCTTSCCSSCCEEEEEETT-T---TEEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEE
T ss_pred ecCCCccccccccccccceEEEEEECC-C---CcEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEE
Confidence 6532100 00012367777765 1 222233333 23456666654 455544444554333
No 278
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.52 E-value=3.1e-05 Score=84.66 Aligned_cols=246 Identities=13% Similarity=0.141 Sum_probs=137.2
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECC--CCceeccCc----cceeeeEEEecCCCEEEEEEecCCCCcceeE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLN--SGALCSKPQ----AVRVSNIAWAKDGQALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~--tg~~~~~~~----~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~ 198 (728)
.+..++|||||++|+++...+| .|.|+|+. +++.+.... ...+..++|+|||+.|+.... ...|+
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-----~g~v~ 174 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDK----SLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-----FGDVY 174 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGT----EEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-----TSEEE
T ss_pred ceEEEEEcCCCCEEEEEECCCC----eEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-----CCcEE
Confidence 4778899999999876655555 38899988 776554321 345678999999998877632 34689
Q ss_pred EEECCCCCcee---EEeeecCcceEEEEEEcCC---CCEEEEEEcCCCceEEEEEeCCCCCCCeEEee-ecCCce-EEEE
Q 004839 199 CSIIGSTDEDA---LLLEESNENVYVNIRHTKD---FHFVCVHTFSTTSSKVFLINAADPFSGLTLIW-ECEGLA-HCIV 270 (728)
Q Consensus 199 ~~~l~t~~~~~---lv~~~~~~~~~~~~~~SpD---g~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~-~~~~~~-~~~~ 270 (728)
.+++.+..... ..+.... .....+.|+|| +++|+..+.+ ..|+++|+.++. ....+. .....+ ...+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~~~~l~s~~~d---~~i~vwd~~~~~-~~~~~~~~h~~~v~~~~~ 249 (450)
T 2vdu_B 175 SIDINSIPEEKFTQEPILGHV-SMLTDVHLIKDSDGHQFIITSDRD---EHIKISHYPQCF-IVDKWLFGHKHFVSSICC 249 (450)
T ss_dssp EEETTSCCCSSCCCCCSEECS-SCEEEEEEEECTTSCEEEEEEETT---SCEEEEEESCTT-CEEEECCCCSSCEEEEEE
T ss_pred EEecCCcccccccceeeeccc-CceEEEEEcCCCCCCcEEEEEcCC---CcEEEEECCCCc-eeeeeecCCCCceEEEEE
Confidence 99987664211 1122222 23456789999 8887665543 357888887632 222322 222222 2344
Q ss_pred eecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeec------------------------CCCceEEEEEe
Q 004839 271 EHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFID------------------------DQGLVVEDVDF 326 (728)
Q Consensus 271 ~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~------------------------~~~~~i~~~~~ 326 (728)
+ +++.|+..+. ++ .|...++. . ......+.. ..+..+..+.+
T Consensus 250 s-d~~~l~s~~~-d~--------~v~vwd~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 250 G-KDYLLLSAGG-DD--------KIFAWDWK-T---GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp C-STTEEEEEES-SS--------EEEEEETT-T---CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred C-CCCEEEEEeC-CC--------eEEEEECC-C---CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 5 6666655442 21 23334433 1 111111110 11244666666
Q ss_pred eC--CEEEEEEecCCeeEEEEEec--CCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCc--
Q 004839 327 CK--THMALILREGRTYRLCSVSL--PLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPD-- 400 (728)
Q Consensus 327 ~~--~~lv~~~~~~g~~~l~~~~l--~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~-- 400 (728)
.. +.|++....++. |.++++ ..+ ++ +. ....+..+..+..+. ++ .+.+++...+...|.
T Consensus 316 ~~~~~~l~~~~~~d~~--i~iw~~~~~~~-~~----l~--~~~~~~~~~~v~~~~----~~--~~~~~v~~~~~~~~~~~ 380 (450)
T 2vdu_B 316 SKNLPFVAFFVEATKC--IIILEMSEKQK-GD----LA--LKQIITFPYNVISLS----AH--NDEFQVTLDNKESSGVQ 380 (450)
T ss_dssp CSSSSEEEEEETTCSE--EEEEEECSSST-TC----EE--EEEEEECSSCEEEEE----EE--TTEEEEEECCTTCCSSC
T ss_pred eCCCCEEEEEECCCCe--EEEEEeccCCC-Cc----ee--eccEeccCCceEEEE----ec--CCcEEEEEecccCCCCC
Confidence 64 455555435554 455554 221 00 10 011233333333332 22 246778888888886
Q ss_pred ----eEEEEECCCCeEE
Q 004839 401 ----AVVDYDLSYGKWN 413 (728)
Q Consensus 401 ----~~~~~~~~~~~~~ 413 (728)
++|.++..+++++
T Consensus 381 ~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 381 KNFAKFIEYNLNENSFV 397 (450)
T ss_dssp CCSEEEEEEETTTTEEE
T ss_pred CcceEEEEEEcCCCeEE
Confidence 9999999888764
No 279
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.49 E-value=1.5e-07 Score=98.64 Aligned_cols=109 Identities=11% Similarity=-0.010 Sum_probs=80.2
Q ss_pred cEEEEEcCCCCCC--------cCccc----HHHHHHHHHCCeE---EEEEcCCCCCCCCCccccccccCCCCCcHHHHHH
Q 004839 497 PGLLHGHGAYGEL--------LDKRW----RSELKSLLDRGWV---VAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFIS 561 (728)
Q Consensus 497 P~vv~~hGg~~~~--------~~~~~----~~~~~~l~~~Gy~---v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~ 561 (728)
+.||++||..+.. ....| ......|.++||. |+.+|+||+|.....- .........+++.+
T Consensus 41 ~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~----~~~~~~~~~~~l~~ 116 (342)
T 2x5x_A 41 TPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQ----YNYHSSTKYAIIKT 116 (342)
T ss_dssp CCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGG----GCCBCHHHHHHHHH
T ss_pred CeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCcc----ccCCHHHHHHHHHH
Confidence 4488899975532 12345 6678899999999 9999999987532110 00112235678888
Q ss_pred HHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhC--CCceeEEEEeCCccc
Q 004839 562 CARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC--PDLFRAVVLEVPFLD 611 (728)
Q Consensus 562 ~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~--p~~f~a~v~~~p~~d 611 (728)
.++.++++- ..+++.++||||||.++..++.++ |++++++|+.+|...
T Consensus 117 ~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 117 FIDKVKAYT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 888887652 236899999999999999999987 899999999988654
No 280
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.49 E-value=0.00017 Score=74.36 Aligned_cols=237 Identities=9% Similarity=-0.000 Sum_probs=132.6
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccC-------ccceeeeEEEecCCCEEEEEEecCCCCccee
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP-------QAVRVSNIAWAKDGQALIYVVTDQNKRPYQI 197 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~-------~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v 197 (728)
.+..+.|||||++|+... +| .|.++|+.+++..... ....+..+.|+||++.|+....+ ..|
T Consensus 53 ~v~~~~~~~~~~~l~~~~--dg----~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i 121 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG--KG----CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA-----STL 121 (337)
T ss_dssp CCCEEEECSSSSEEEEEC--BS----EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS-----SEE
T ss_pred ceEEEEEecCCcEEEEcC--CC----eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC-----CcE
Confidence 466788999999998874 33 4999999987533221 13467889999999988776432 368
Q ss_pred EEEECCCCCc-eeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeee-cCCce-EEEEeecC
Q 004839 198 YCSIIGSTDE-DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWE-CEGLA-HCIVEHHE 274 (728)
Q Consensus 198 ~~~~l~t~~~-~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~-~~~~~-~~~~~~dg 274 (728)
..+++.++.. ....+.... .....+.++||+++|+....+ ..|+++|+.+ ++...... ....+ ...+++++
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d---g~v~~~d~~~--~~~~~~~~~~~~~i~~~~~~~~~ 195 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSSA-PACYALAISPDSKVCFSCCSD---GNIAVWDLHN--QTLVRQFQGHTDGASCIDISNDG 195 (337)
T ss_dssp EEEECCCC--EEEEEEECSS-SCEEEEEECTTSSEEEEEETT---SCEEEEETTT--TEEEEEECCCSSCEEEEEECTTS
T ss_pred EEEECCCCCcceeeecccCC-CceEEEEECCCCCEEEEEeCC---CcEEEEeCCC--CceeeeeecccCceEEEEECCCC
Confidence 8888877642 222222222 234567899999998876654 3588899877 33332222 22222 23456777
Q ss_pred CEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecCCCCC
Q 004839 275 GFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLPLPAG 353 (728)
Q Consensus 275 ~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~~~~ 353 (728)
..|+..+.. ..|...++. . ......+. ....+..+.+.. +.++++...++ .+.++++..++
T Consensus 196 ~~l~~~~~d---------g~i~~~d~~-~---~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~--~i~~~~~~~~~- 257 (337)
T 1gxr_A 196 TKLWTGGLD---------NTVRSWDLR-E---GRQLQQHD--FTSQIFSLGYCPTGEWLAVGMESS--NVEVLHVNKPD- 257 (337)
T ss_dssp SEEEEEETT---------SEEEEEETT-T---TEEEEEEE--CSSCEEEEEECTTSSEEEEEETTS--CEEEEETTSSC-
T ss_pred CEEEEEecC---------CcEEEEECC-C---CceEeeec--CCCceEEEEECCCCCEEEEEcCCC--cEEEEECCCCC-
Confidence 776655432 235555554 1 11111122 223455666653 33444444454 36667765432
Q ss_pred CcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEE
Q 004839 354 KGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWN 413 (728)
Q Consensus 354 ~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~ 413 (728)
... .......+..+. +++++..++.. +. -..+..+|+.+++..
T Consensus 258 --~~~-------~~~~~~~v~~~~----~~~~~~~l~~~-~~---dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 258 --KYQ-------LHLHESCVLSLK----FAYCGKWFVST-GK---DNLLNAWRTPYGASI 300 (337)
T ss_dssp --EEE-------ECCCSSCEEEEE----ECTTSSEEEEE-ET---TSEEEEEETTTCCEE
T ss_pred --eEE-------EcCCccceeEEE----ECCCCCEEEEe-cC---CCcEEEEECCCCeEE
Confidence 000 111122233322 34555655433 22 257888998887654
No 281
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.47 E-value=6.2e-05 Score=78.81 Aligned_cols=150 Identities=9% Similarity=0.059 Sum_probs=93.9
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
.+..+.|||||++|+... .+| .|+++|+.+++.+.... ...+..+.|+||++.|+....+.......|..+++.
T Consensus 76 ~v~~~~~~~~~~~l~s~~-~dg----~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGS-ADY----SIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIE 150 (369)
T ss_dssp CEEEEEECTTSSEEEEEE-TTT----EEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEe-CCC----eEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence 467788999999998764 444 49999999998665433 456788999999998888754422233467777765
Q ss_pred CCCc-eeEE----------eeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce-EEEEe
Q 004839 204 STDE-DALL----------LEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCIVE 271 (728)
Q Consensus 204 t~~~-~~lv----------~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~~~ 271 (728)
+... ..+. ...........+.|+|||++|+....+ ..|+++|+.+.......+......+ ...++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 227 (369)
T 3zwl_B 151 RDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD---GKISKYDVSNNYEYVDSIDLHEKSISDMQFS 227 (369)
T ss_dssp ECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT---SEEEEEETTTTTEEEEEEECCSSCEEEEEEC
T ss_pred CCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC---CEEEEEECCCCcEeEEEEecCCCceeEEEEC
Confidence 4421 1111 011111134568899999998776553 4688999976322233333333332 23456
Q ss_pred ecCCEEEEEEc
Q 004839 272 HHEGFLYLFTD 282 (728)
Q Consensus 272 ~dg~~l~~~tn 282 (728)
+++..|+..+.
T Consensus 228 ~~~~~l~~~~~ 238 (369)
T 3zwl_B 228 PDLTYFITSSR 238 (369)
T ss_dssp TTSSEEEEEET
T ss_pred CCCCEEEEecC
Confidence 77777665543
No 282
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.46 E-value=1.7e-07 Score=101.87 Aligned_cols=112 Identities=11% Similarity=-0.002 Sum_probs=76.5
Q ss_pred CCccEEEEEcCCCCCCcCcccHH-HHHHHH-HCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCC
Q 004839 494 NQNPGLLHGHGAYGELLDKRWRS-ELKSLL-DRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEI 571 (728)
Q Consensus 494 ~~~P~vv~~hGg~~~~~~~~~~~-~~~~l~-~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 571 (728)
...|+||++||..+.. ...|.. ....|+ ..+|.|+++|+||+|... +..+. ..-....+|+.+.+++|.++..
T Consensus 67 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~--~~~~~v~~~la~ll~~L~~~~g 141 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKSGSRTA--YSQAS--QNVRIVGAEVAYLVGVLQSSFD 141 (449)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHHHHSSC--HHHHH--HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCcccCCc--cHHHH--HHHHHHHHHHHHHHHHHHHhcC
Confidence 3458999999965432 234554 445554 579999999999987532 11100 0000122455566677764433
Q ss_pred CCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 572 VKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 572 ~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
++.+++.++|||+||.+++.++.++|++++.+++..|..
T Consensus 142 ~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 142 YSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 567899999999999999999999999999999877643
No 283
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.44 E-value=1.9e-07 Score=101.44 Aligned_cols=110 Identities=12% Similarity=0.078 Sum_probs=74.0
Q ss_pred CccEEEEEcCCCCCCcCcccHH-HHHHHHH-CCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRS-ELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIV 572 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~-~~~~l~~-~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 572 (728)
..|+||++||..+.. ...|.. ....|++ .||.|+++|+||+|... +..+. ..-....+|+.+.+++|.++..+
T Consensus 69 ~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~--~~~~~~a~~l~~ll~~L~~~~g~ 143 (450)
T 1rp1_A 69 DKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKGSQTS--YTQAA--NNVRVVGAQVAQMLSMLSANYSY 143 (450)
T ss_dssp TSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC--HHHHH--HHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccccCCc--chHHH--HHHHHHHHHHHHHHHHHHHhcCC
Confidence 458999999965433 224544 3455665 48999999999976431 11100 00001234555666666543334
Q ss_pred CCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 573 KEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 573 d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
+.+++.++|||+||.+++.++.++|+ ++.+++..|..
T Consensus 144 ~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 144 SPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred ChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 67899999999999999999999999 99998777643
No 284
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.42 E-value=1.4e-06 Score=77.82 Aligned_cols=96 Identities=14% Similarity=0.073 Sum_probs=64.3
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCC
Q 004839 475 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 554 (728)
Q Consensus 475 ~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~ 554 (728)
.+|.++..... ++.|.||++| +.. ..|... | +++|.|+.+|+||+|.+... .. .
T Consensus 9 ~~g~~~~~~~~--------g~~~~vv~~H-~~~----~~~~~~---l-~~~~~v~~~d~~G~G~s~~~------~~---~ 62 (131)
T 2dst_A 9 LYGLNLVFDRV--------GKGPPVLLVA-EEA----SRWPEA---L-PEGYAFYLLDLPGYGRTEGP------RM---A 62 (131)
T ss_dssp ETTEEEEEEEE--------CCSSEEEEES-SSG----GGCCSC---C-CTTSEEEEECCTTSTTCCCC------CC---C
T ss_pred ECCEEEEEEEc--------CCCCeEEEEc-CCH----HHHHHH---H-hCCcEEEEECCCCCCCCCCC------CC---C
Confidence 47777654321 1246789999 322 122222 4 45699999999999865322 11 1
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCc
Q 004839 555 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDL 599 (728)
Q Consensus 555 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~ 599 (728)
++++.+.+..+++.- +.+++.++|+|+||.+++.++.++|.+
T Consensus 63 -~~~~~~~~~~~~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~l 104 (131)
T 2dst_A 63 -PEELAHFVAGFAVMM--NLGAPWVLLRGLGLALGPHLEALGLRA 104 (131)
T ss_dssp -HHHHHHHHHHHHHHT--TCCSCEEEECGGGGGGHHHHHHTTCCE
T ss_pred -HHHHHHHHHHHHHHc--CCCccEEEEEChHHHHHHHHHhcCCcE
Confidence 677777666666542 446899999999999999999998863
No 285
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.41 E-value=2.6e-05 Score=82.15 Aligned_cols=196 Identities=8% Similarity=-0.044 Sum_probs=114.3
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..++|||||++||-.. .+|. |+++|+++++.+.... ...+..+.|+||++.++.+...+ ..|.+.|+
T Consensus 129 ~V~~v~~spdg~~l~sgs-~d~~----i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D----~~v~iwd~ 199 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGS-KDIC----IKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED----NRILLWDT 199 (344)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSC----EEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT----SCEEEEET
T ss_pred CEEEEEECCCCCEEEEEe-CCCe----EEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc----cccccccc
Confidence 467789999999998764 4554 9999999998665432 45678899999998777765432 36788898
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE-EEEeecCCEEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFLYLFT 281 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~t 281 (728)
.+++....+...........+.++|++..+++....+ ..|.+.|+.++. ....+......+. ..+++++..+++..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d--g~v~~wd~~~~~-~~~~~~~h~~~v~~v~fsp~g~~~lasg 276 (344)
T 4gqb_B 200 RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN--GTVSLVDTKSTS-CVLSSAVHSQCVTGLVFSPHSVPFLASL 276 (344)
T ss_dssp TSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT--SEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred cccceeeeeecceeeccceeeeecCCCCcceEEeccC--CcEEEEECCCCc-EEEEEcCCCCCEEEEEEccCCCeEEEEE
Confidence 8775322222112222335678999766555544332 358888998742 2344433333332 34567776655544
Q ss_pred cCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEE
Q 004839 282 DAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSV 346 (728)
Q Consensus 282 n~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~ 346 (728)
..++ ..+| .++. . .+...+ ......+..+.+. ++.+++....++.-.++.+
T Consensus 277 s~D~------~i~v--wd~~-~---~~~~~~--~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 277 SEDC------SLAV--LDSS-L---SELFRS--QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp ETTS------CEEE--ECTT-C---CEEEEE--CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred eCCC------eEEE--EECC-C---CcEEEE--cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 4443 2334 3443 1 211122 2223456777765 4567777777775444433
No 286
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.41 E-value=2.4e-05 Score=82.79 Aligned_cols=248 Identities=11% Similarity=0.032 Sum_probs=124.6
Q ss_pred EeeceeeCCCCCEEEEEEEcCCC-cEEEEEEEECCCCceeccCc------cceeeeEEEecCCCEEEEEEecCCCCccee
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDN-DYFTLSVRNLNSGALCSKPQ------AVRVSNIAWAKDGQALIYVVTDQNKRPYQI 197 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~-e~~~l~v~dl~tg~~~~~~~------~~~~~~~~WspDg~~l~y~~~~~~~~~~~v 197 (728)
.+..++|||||++||-..+.... -...|++++..+++...... ...+..++|+||++.| ....+ ..|
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~d-----g~v 117 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDS-----GAV 117 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETT-----SCE
T ss_pred CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECC-----CEE
Confidence 68889999999999877542211 12458999998876443211 2357889999998644 33222 246
Q ss_pred EEEECCCCCc-eeEEeee-cCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeec-CCceE-EEEeec
Q 004839 198 YCSIIGSTDE-DALLLEE-SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWEC-EGLAH-CIVEHH 273 (728)
Q Consensus 198 ~~~~l~t~~~-~~lv~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~-~~~~~-~~~~~d 273 (728)
.+.|+.+++. ....+.. ........+.|+|||++|+..+.+. .|.+.|+.+ ++....... ...+. ..++++
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg---~v~iwd~~~--~~~~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF---SVKVWDLSQ--KAVLKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS---CEEEEETTT--TEEEEEECCCSSCEEEEEECTT
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC---eEEEEECCC--CcEEEEEcCCCCCEEEEEEccC
Confidence 6667766531 1111111 1122345689999999987655433 478889877 333322222 22222 234566
Q ss_pred CCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCCC
Q 004839 274 EGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 274 g~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
++.+++....++ .|...++. .. .....+........+..+.+. ++.++++...++. |.++++.++
T Consensus 193 ~~~~~~s~~~dg--------~v~~wd~~-~~--~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~--i~~wd~~~~ 259 (357)
T 4g56_B 193 KDTIFLSCGEDG--------RILLWDTR-KP--KPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGN--VSLVNIKNP 259 (357)
T ss_dssp CSSCEEEEETTS--------CEEECCTT-SS--SCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSC--EEEEESSCG
T ss_pred CCceeeeeccCC--------ceEEEECC-CC--ceeeeeeeccccccccchhhhhcccceEEEeecccc--eeEEECCCC
Confidence 665555444432 24444443 21 111111112223345566655 3456666666553 556676543
Q ss_pred CCCcceeecccccccccCC-CceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEE
Q 004839 352 AGKGVVHLKELHPHFLPLP-KYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWN 413 (728)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~p-~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~ 413 (728)
+ . ...+... ..+..+. +++++..++++.+.. ..+..+|+.+++..
T Consensus 260 ~-----~-----~~~~~~~~~~v~~l~----~sp~~~~~lasgs~D---~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 260 D-----S-----AQTSAVHSQNITGLA----YSYHSSPFLASISED---CTVAVLDADFSEVF 305 (357)
T ss_dssp G-----G-----CEEECCCSSCEEEEE----ECSSSSCCEEEEETT---SCEEEECTTSCEEE
T ss_pred c-----E-----eEEEeccceeEEEEE----EcCCCCCEEEEEeCC---CEEEEEECCCCcEe
Confidence 2 0 1112211 1233332 345555555555433 36778888877653
No 287
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.40 E-value=7.5e-07 Score=89.07 Aligned_cols=91 Identities=15% Similarity=0.052 Sum_probs=65.8
Q ss_pred ccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004839 496 NPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 575 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 575 (728)
.|.|+++||..+.. ..|......|. .+|.|+.+|++|.+. ..+|+.+.++.+. ..+
T Consensus 22 ~~~l~~~hg~~~~~--~~~~~~~~~l~-~~~~v~~~d~~g~~~----------------~~~~~~~~i~~~~-----~~~ 77 (244)
T 2cb9_A 22 GKNLFCFPPISGFG--IYFKDLALQLN-HKAAVYGFHFIEEDS----------------RIEQYVSRITEIQ-----PEG 77 (244)
T ss_dssp SSEEEEECCTTCCG--GGGHHHHHHTT-TTSEEEEECCCCSTT----------------HHHHHHHHHHHHC-----SSS
T ss_pred CCCEEEECCCCCCH--HHHHHHHHHhC-CCceEEEEcCCCHHH----------------HHHHHHHHHHHhC-----CCC
Confidence 46789999976543 45666666664 689999999998532 3456665555442 135
Q ss_pred cEEEEEeCccHHHHHHHHHhC---CCceeEEEEeCCcc
Q 004839 576 KLAGWGYSAGGLLVAAAINCC---PDLFRAVVLEVPFL 610 (728)
Q Consensus 576 ri~i~G~S~GG~~~~~~~~~~---p~~f~a~v~~~p~~ 610 (728)
++.++|+|+||.++..++.+. ++.++.+|+..+..
T Consensus 78 ~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~ 115 (244)
T 2cb9_A 78 PYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYK 115 (244)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCC
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCC
Confidence 799999999999999888764 57888888877653
No 288
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.38 E-value=1.7e-05 Score=82.23 Aligned_cols=124 Identities=12% Similarity=-0.007 Sum_probs=78.6
Q ss_pred EEEEEECCCCceeccCc-cc---eeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCc-eeEEeeecC--cceEEEE
Q 004839 151 TLSVRNLNSGALCSKPQ-AV---RVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE-DALLLEESN--ENVYVNI 223 (728)
Q Consensus 151 ~l~v~dl~tg~~~~~~~-~~---~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~-~~lv~~~~~--~~~~~~~ 223 (728)
.|+++|+++++.+.... .. ....++|+|||+.||++... ...|+++|+.+++. ..+...... ......+
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK----SESLVKIDLVTGETLGRIDLSTPEERVKSLFGA 87 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT----TTEEEEEETTTCCEEEEEECCBTTEEEECTTCE
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC----CCeEEEEECCCCCeEeeEEcCCcccccccccce
Confidence 49999999998665433 33 46789999999988887532 34799999987752 222221100 0011246
Q ss_pred EEcCCCCEEEEEEcC-----C----CceEEEEEeCCCCCCCeE-EeeecCCceEEEEeecCCEEEEE
Q 004839 224 RHTKDFHFVCVHTFS-----T----TSSKVFLINAADPFSGLT-LIWECEGLAHCIVEHHEGFLYLF 280 (728)
Q Consensus 224 ~~SpDg~~l~~~~~~-----~----~~~~l~~~dl~~~~~~~~-~l~~~~~~~~~~~~~dg~~l~~~ 280 (728)
.++|||++|++.... . ....|+++|+++ ++.. .+..........++++|+.||+.
T Consensus 88 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET--LSRRKAFEAPRQITMLAWARDGSKLYGL 152 (337)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT--TEEEEEEECCSSCCCEEECTTSSCEEEE
T ss_pred EECCCCCEEEEEecccccccccccccCceEEEEECCC--CcEEEEEeCCCCcceeEECCCCCEEEEe
Confidence 899999999887521 1 246899999987 3332 23222222334577888888776
No 289
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.38 E-value=1.8e-07 Score=101.25 Aligned_cols=113 Identities=12% Similarity=0.085 Sum_probs=80.8
Q ss_pred CccEEEEEcCCCCCCcCcccHHHHHHHHHCCe---EEEEEcCCCCCCC-----CCcccccc----c--------------
Q 004839 495 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGW---VVAFADVRGGGGG-----GKKWHHDG----R-------------- 548 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy---~v~~~d~RG~g~~-----G~~~~~~~----~-------------- 548 (728)
..|.||++||..+.. ..|......|+++|| .|+.+|+||+|.+ ...+.... .
T Consensus 21 ~~ppVVLlHG~g~s~--~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v 98 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSA--GQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKI 98 (484)
T ss_dssp CCCCEEEECCTTCCG--GGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHH
T ss_pred CCCEEEEECCCCCCH--HHHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccc
Confidence 457789999976543 567888899999999 6999999998742 00000000 0
Q ss_pred -----cCCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCC---CceeEEEEeCCccc
Q 004839 549 -----RTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCP---DLFRAVVLEVPFLD 611 (728)
Q Consensus 549 -----~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p---~~f~a~v~~~p~~d 611 (728)
.......++++.+.++.++++- ..+++.++||||||.+++.++.++| ++++++|+.+|..+
T Consensus 99 ~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 99 LSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred ccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0001124567777788777652 2378999999999999999999887 48999999988665
No 290
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.38 E-value=2.2e-05 Score=83.27 Aligned_cols=120 Identities=7% Similarity=0.034 Sum_probs=67.7
Q ss_pred ceeeCCCCCE-EEEEEEcC-----CC----cEEEEEEEECC-CCceecc-C-----ccceeeeEEEecCCCEEEEEEecC
Q 004839 128 LSEVSPDHKF-LAYTMYDK-----DN----DYFTLSVRNLN-SGALCSK-P-----QAVRVSNIAWAKDGQALIYVVTDQ 190 (728)
Q Consensus 128 ~~~~SPDG~~-lA~~~~~~-----g~----e~~~l~v~dl~-tg~~~~~-~-----~~~~~~~~~WspDg~~l~y~~~~~ 190 (728)
.+.|||||++ ++|+.+.+ ++ ....+.+++++ +|+.... . .......++|+|||+.||.+..
T Consensus 87 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~-- 164 (365)
T 1jof_A 87 ANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL-- 164 (365)
T ss_dssp GGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET--
T ss_pred cEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC--
Confidence 4679999997 45554300 00 01236777876 4654321 1 1235678999999998765521
Q ss_pred CCCcceeEEEECC-CCCceeE-EeeecC-cceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 191 NKRPYQIYCSIIG-STDEDAL-LLEESN-ENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 191 ~~~~~~v~~~~l~-t~~~~~l-v~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
....|+++++. +++...+ ...... ......+.+||||++|++.......-.+|.+|.++
T Consensus 165 --~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 226 (365)
T 1jof_A 165 --TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp --TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred --CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC
Confidence 12478888887 5542111 111111 12234578999999998776544333455555544
No 291
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.37 E-value=0.00018 Score=73.84 Aligned_cols=198 Identities=7% Similarity=-0.000 Sum_probs=115.9
Q ss_pred eceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCC
Q 004839 127 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD 206 (728)
Q Consensus 127 ~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~ 206 (728)
..+.|+|+++.|.|+ +..+. .|+.+|+++++............++|++||+ |+... ...|++++..+++
T Consensus 16 Egp~w~~~~~~l~~~-d~~~~---~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~-l~v~~------~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFV-DIPAK---KVCRWDSFTKQVQRVTMDAPVSSVALRQSGG-YVATI------GTKFCALNWKEQS 84 (297)
T ss_dssp EEEEEETTTTEEEEE-ETTTT---EEEEEETTTCCEEEEECSSCEEEEEEBTTSS-EEEEE------TTEEEEEETTTTE
T ss_pred cCCeEECCCCEEEEE-ECCCC---EEEEEECCCCcEEEEeCCCceEEEEECCCCC-EEEEE------CCeEEEEECCCCc
Confidence 356799999988886 55443 4899999998764433345678899999999 54442 1379999987764
Q ss_pred ceeEEeeecC--cceEEEEEEcCCCCEEEEEEcC---------CCceEEEEEeCCCCCCCeEEeeecCC-ceEEEEeecC
Q 004839 207 EDALLLEESN--ENVYVNIRHTKDFHFVCVHTFS---------TTSSKVFLINAADPFSGLTLIWECEG-LAHCIVEHHE 274 (728)
Q Consensus 207 ~~~lv~~~~~--~~~~~~~~~SpDg~~l~~~~~~---------~~~~~l~~~dl~~~~~~~~~l~~~~~-~~~~~~~~dg 274 (728)
...+.....+ .....++.++|||+ |++.... .....||.++.++ ....+..... .....+++|+
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g---~~~~~~~~~~~pngi~~spdg 160 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDH---HVKKYFDQVDISNGLDWSLDH 160 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTS---CEEEEEEEESBEEEEEECTTS
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCC---CEEEEeeccccccceEEcCCC
Confidence 3222211111 12235678999999 4554422 1235799998753 3333333222 1234567888
Q ss_pred CEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCC--eEEeec--CCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecC
Q 004839 275 GFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTW--ESVFID--DQGLVVEDVDFCK-THMALILREGRTYRLCSVSLP 349 (728)
Q Consensus 275 ~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~li~~--~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~ 349 (728)
+.||+..... ..|++++.+ . ..+.. ..++.. .....+.++.++. +.|++....++ +|.+++..
T Consensus 161 ~~lyv~~~~~--------~~i~~~~~d-~-~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~--~v~~~d~~ 228 (297)
T 3g4e_A 161 KIFYYIDSLS--------YSVDAFDYD-L-QTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGG--RVIRLDPV 228 (297)
T ss_dssp CEEEEEEGGG--------TEEEEEEEC-T-TTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTT--EEEEECTT
T ss_pred CEEEEecCCC--------CcEEEEecc-C-CCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCC--EEEEEcCC
Confidence 8888765433 246666542 1 11222 122211 1123566777764 56776655443 58888876
Q ss_pred CC
Q 004839 350 LP 351 (728)
Q Consensus 350 ~~ 351 (728)
++
T Consensus 229 tG 230 (297)
T 3g4e_A 229 TG 230 (297)
T ss_dssp TC
T ss_pred Cc
Confidence 54
No 292
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.34 E-value=7.4e-05 Score=79.16 Aligned_cols=243 Identities=10% Similarity=0.024 Sum_probs=127.5
Q ss_pred eeeCCCCCEEEEEEE-----cCCCcEEEEEEEECCCCceeccCc-c--------ceeeeEEEecCCCEEEEEEecCCCCc
Q 004839 129 SEVSPDHKFLAYTMY-----DKDNDYFTLSVRNLNSGALCSKPQ-A--------VRVSNIAWAKDGQALIYVVTDQNKRP 194 (728)
Q Consensus 129 ~~~SPDG~~lA~~~~-----~~g~e~~~l~v~dl~tg~~~~~~~-~--------~~~~~~~WspDg~~l~y~~~~~~~~~ 194 (728)
+.+||||++|..+.. ..|.....|.++|+++++.+.... . .....+.++|||++||.+... ..
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~---~~ 159 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS---PA 159 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS---SS
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC---CC
Confidence 789999998865531 122234569999999998665322 1 134568999999998776321 13
Q ss_pred ceeEEEECCCCC-ceeEE-------eeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce
Q 004839 195 YQIYCSIIGSTD-EDALL-------LEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA 266 (728)
Q Consensus 195 ~~v~~~~l~t~~-~~~lv-------~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~ 266 (728)
..|..+|+.+.+ ..++. +......| +..++||+.+++.....+.- + +..+ ..+.......
T Consensus 160 ~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~---~~~~~DG~~~~v~~~~~g~v-~---~~~~-----~~~~~~~~~~ 227 (386)
T 3sjl_D 160 PAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTF---FMHCRDGSLAKVAFGTEGTP-E---ITHT-----EVFHPEDEFL 227 (386)
T ss_dssp CEEEEEETTTTEEEEEEECCSEEEEEEEETTEE---EEEETTSCEEEEECCSSSCC-E---EEEC-----CCCSCTTSCB
T ss_pred CeEEEEECCCCcEEEEEECCCcceeecCCCcee---EEECCCCCEEEEECCCCCeE-E---Eeec-----ceeccccccc
Confidence 478999998875 22221 11111112 36688998877766542211 1 1000 0000000000
Q ss_pred --EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCC---CCCCeEEeec-----C---CCceEEEEEeeCCEEEE
Q 004839 267 --HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFP---SRTWESVFID-----D---QGLVVEDVDFCKTHMAL 333 (728)
Q Consensus 267 --~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~li~~-----~---~~~~i~~~~~~~~~lv~ 333 (728)
...+...+++++|++.. ..|+.++.. ... ...|.. +.. . .+...-.++..++++|+
T Consensus 228 ~~~~~~~~~dG~~~~vs~~---------g~V~v~d~~-~~~~~v~~~~~~-~~~~~~~~g~~p~g~q~~a~~~~~~~lyV 296 (386)
T 3sjl_D 228 INHPAYSQKAGRLVWPTYT---------GKIHQIDLS-SGDAKFLPAVEA-LTEAERADGWRPGGWQQVAYHRALDRIYL 296 (386)
T ss_dssp CSCCEEETTTTEEEEEBTT---------SEEEEEECT-TSSCEECCCEES-SCHHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred cccceeEcCCCcEEEEeCC---------CEEEEEECC-CCcceeecceec-cccccccccccCCCcceeeECCCCCeEEE
Confidence 01222223456666552 136666654 111 111210 000 0 11222344455689998
Q ss_pred EEecC-------CeeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEE
Q 004839 334 ILREG-------RTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYD 406 (728)
Q Consensus 334 ~~~~~-------g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~ 406 (728)
....+ ...+|.++|+.+.+ + ...++++....++. ++.|+...+|+.+. .-..+..+|
T Consensus 297 ~~~~~~~~~hk~~~~~V~viD~~t~k------v----~~~i~vg~~~~~la----vs~D~~~~ly~tn~--~~~~VsViD 360 (386)
T 3sjl_D 297 LVDQRDEWRHKTASRFVVVLDAKTGE------R----LAKFEMGHEIDSIN----VSQDEKPLLYALST--GDKTLYIHD 360 (386)
T ss_dssp EEEECCTTCTTSCEEEEEEEETTTCC------E----EEEEEEEEEECEEE----ECSSSSCEEEEEET--TTTEEEEEE
T ss_pred EeccccccccCCCCCEEEEEECCCCe------E----EEEEECCCCcceEE----ECCCCCeEEEEEcC--CCCeEEEEE
Confidence 87642 24689999987653 1 12344443333332 35666645554432 245889999
Q ss_pred CCCCeEE
Q 004839 407 LSYGKWN 413 (728)
Q Consensus 407 ~~~~~~~ 413 (728)
..+++..
T Consensus 361 ~~t~k~~ 367 (386)
T 3sjl_D 361 AESGEEL 367 (386)
T ss_dssp TTTCCEE
T ss_pred CCCCcEE
Confidence 9988753
No 293
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.33 E-value=0.00051 Score=71.21 Aligned_cols=203 Identities=11% Similarity=0.046 Sum_probs=113.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccC--ccceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP--QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
....+.|+|||+ |.++ +..+. .|+++|+++++..... .......++|+|||+ |++...........|++++.
T Consensus 46 ~~~~~~~~~~g~-l~~~-~~~~~---~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLL-DVFEG---NIFKINPETKEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp CEEEEEECTTSC-EEEE-ETTTC---EEEEECTTTCCEEEEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECT
T ss_pred cccCcEECCCCC-EEEE-ECCCC---EEEEEeCCCCcEEEEeeCCCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeC
Confidence 356788999999 4444 33332 5999999998865543 234577899999997 54543322112247999998
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCC----CceEEEEEeCCCCCCCeEEeeecCCc-eEEEEeecCCEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFST----TSSKVFLINAADPFSGLTLIWECEGL-AHCIVEHHEGFL 277 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~----~~~~l~~~dl~~~~~~~~~l~~~~~~-~~~~~~~dg~~l 277 (728)
.++....++..........++.++|||+.+ +..... ....||++|.++ ++...+...... ....++++|+.|
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~-v~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 120 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFY-FTDFRGYSTNPLGGVYYVSPDF--RTVTPIIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTSCEE-EEECCCBTTBCCEEEEEECTTS--CCEEEEEEEESSEEEEEECTTSSEE
T ss_pred CCCEEEEEEccCccCCcccceEECCCCCEE-EEeccccccCCCceEEEEeCCC--CEEEEeecCCCcccceEECCCCCEE
Confidence 776533222211122234567899999754 444321 236799999876 344444332222 233457888888
Q ss_pred EEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeE----Ee-ecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEec
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWES----VF-IDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSL 348 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----li-~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l 348 (728)
|+..... ..|++++.+ .. ...... +. .......+.++.+.. +.+++....++ .|.+++.
T Consensus 197 ~v~~~~~--------~~i~~~d~~-~~-g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~--~v~~~d~ 261 (333)
T 2dg1_A 197 WVTETTA--------NRLHRIALE-DD-GVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG--RVLVFNK 261 (333)
T ss_dssp EEEEGGG--------TEEEEEEEC-TT-SSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTT--EEEEECT
T ss_pred EEEeCCC--------CeEEEEEec-CC-CcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCC--EEEEECC
Confidence 8765432 246666653 10 111211 11 111113456676664 45666554433 5777775
No 294
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.33 E-value=0.00012 Score=86.25 Aligned_cols=196 Identities=9% Similarity=-0.013 Sum_probs=112.9
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..++|||||++||... .+| .|.|+|+.+|+...... ...+..+.|+|||+.|+.... ...|..+++
T Consensus 15 ~v~~i~~sp~~~~la~~~-~~g----~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~vw~~ 84 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTL-YSG----RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-----DFRIRVFNY 84 (814)
T ss_dssp CEEEEEECSSSSEEEEEE-TTS----EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-----TSEEEEEET
T ss_pred ceEEEEECCCCCEEEEEe-CCC----EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC-----CCeEEEEEC
Confidence 467788999999999885 444 49999999987654322 446788999999998887643 247888898
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE-EEEee-cCCEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEH-HEGFLYLF 280 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~-~~~~~-dg~~l~~~ 280 (728)
.++..-. .+... ......+.|+|||++|+..+.+ ..|.+.|+.++......+......+. ..+++ ++..|+.
T Consensus 85 ~~~~~~~-~~~~~-~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~- 158 (814)
T 3mkq_A 85 NTGEKVV-DFEAH-PDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS- 158 (814)
T ss_dssp TTCCEEE-EEECC-SSCEEEEEECSSSSEEEEEETT---SEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEE-
T ss_pred CCCcEEE-EEecC-CCCEEEEEEeCCCCEEEEEcCC---CEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEE-
Confidence 8765222 22222 2234568999999998765543 35778888763222233332223222 34455 4444444
Q ss_pred EcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee---CCEEEEEEecCCeeEEEEEecCC
Q 004839 281 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC---KTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 281 tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~---~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
...++ .|...++. .. .....+... ....+..+.+. ++.++++...+| .+.++++.+
T Consensus 159 ~~~dg--------~v~vwd~~-~~--~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg--~i~~~d~~~ 217 (814)
T 3mkq_A 159 GCLDR--------TVKVWSLG-QS--TPNFTLTTG-QERGVNYVDYYPLPDKPYMITASDDL--TIKIWDYQT 217 (814)
T ss_dssp EETTS--------EEEEEETT-CS--SCSEEEECC-CTTCCCEEEECCSTTCCEEEEECTTS--EEEEEETTT
T ss_pred EeCCC--------eEEEEECC-CC--cceeEEecC-CCCCEEEEEEEECCCCCEEEEEeCCC--EEEEEECCC
Confidence 33332 24444443 11 112222222 22334444443 334555555555 466666654
No 295
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.32 E-value=0.00034 Score=78.47 Aligned_cols=253 Identities=13% Similarity=0.012 Sum_probs=136.2
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEEC--CCCceeccCc-cceeeeEEEec----CCCEEEEEEecCCCCcceeE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNL--NSGALCSKPQ-AVRVSNIAWAK----DGQALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl--~tg~~~~~~~-~~~~~~~~Wsp----Dg~~l~y~~~~~~~~~~~v~ 198 (728)
...+.+||||++|+.. +.++ .|.++|+ ++++.+.... ......+++|| ||+.||..... ...|.
T Consensus 181 ~~~v~~spdg~~l~v~-~~d~----~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~----~~~v~ 251 (543)
T 1nir_A 181 VHISRMSASGRYLLVI-GRDA----RIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYW----PPQFA 251 (543)
T ss_dssp EEEEEECTTSCEEEEE-ETTS----EEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE----SSEEE
T ss_pred cceEEECCCCCEEEEE-CCCC----eEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEcc----CCeEE
Confidence 3467799999988665 4443 4999999 7877554322 33567889999 99988766432 23677
Q ss_pred EEECCCCCceeEEe-eec--------CcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeE--EeeecCCceE
Q 004839 199 CSIIGSTDEDALLL-EES--------NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLT--LIWECEGLAH 267 (728)
Q Consensus 199 ~~~l~t~~~~~lv~-~~~--------~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~--~l~~~~~~~~ 267 (728)
.+|..+.+.-..+- ... .......+.+|||++.++++... ...|+++|..+.. ..+ .+.....-..
T Consensus 252 v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~--~g~i~vvd~~~~~-~l~~~~i~~~~~~~~ 328 (543)
T 1nir_A 252 IMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE--TGKVLLVNYKDID-NLTVTSIGAAPFLHD 328 (543)
T ss_dssp EEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT--TTEEEEEECTTSS-SCEEEEEECCSSCCC
T ss_pred EEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC--CCeEEEEEecCCC-cceeEEeccCcCccC
Confidence 88887765222221 110 01123467899999988776643 4689999998742 222 2221112223
Q ss_pred EEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeec----CCCceEEEEEeeCCEEEEEEecCCeeEE
Q 004839 268 CIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFID----DQGLVVEDVDFCKTHMALILREGRTYRL 343 (728)
Q Consensus 268 ~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~----~~~~~i~~~~~~~~~lv~~~~~~g~~~l 343 (728)
..++++|++||...+.++ .|..+|.. ..+....+.. .++....-+....+.+++. ...+...|
T Consensus 329 ~~~spdg~~l~va~~~~~--------~v~v~D~~----tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s-~~~~d~~V 395 (543)
T 1nir_A 329 GGWDSSHRYFMTAANNSN--------KVAVIDSK----DRRLSALVDVGKTPHPGRGANFVHPKYGPVWST-SHLGDGSI 395 (543)
T ss_dssp EEECTTSCEEEEEEGGGT--------EEEEEETT----TTEEEEEEECSSSBCCTTCEEEEETTTEEEEEE-EBSSSSEE
T ss_pred ceECCCCCEEEEEecCCC--------eEEEEECC----CCeEEEeeccCCCCCCCCCcccCCCCCccEEEe-ccCCCceE
Confidence 467788887766554332 35556654 1222222321 1222222122223455444 33334467
Q ss_pred EEEecCCCCCCcceeecccccccccCCC-ceeeeecCCCccCCCcEEEEEEccCCCC-----ceEEEEECCCCeE
Q 004839 344 CSVSLPLPAGKGVVHLKELHPHFLPLPK-YVSQIVPGPNYDYYSSTMRFAISSPVMP-----DAVVDYDLSYGKW 412 (728)
Q Consensus 344 ~~~~l~~~~~~~~~~~~~~~~~~~~~p~-~~~~i~~~~~~~~~~~~~~~~~ss~~~p-----~~~~~~~~~~~~~ 412 (728)
.+++.++...+.. .+. ....++.+. ....| ..++++..+.. .++..| ..+..+|.++++.
T Consensus 396 ~v~d~~~~~~~~~-~~~--~v~~l~~~g~~~~~v----~~~pdg~~l~v--~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 396 SLIGTDPKNHPQY-AWK--KVAELQGQGGGSLFI----KTHPKSSHLYV--DTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp EEEECCTTTCTTT-BTS--EEEEEECSCSCCCCE----ECCTTCCEEEE--CCTTCSSHHHHTCEEEEETTCTTS
T ss_pred EEEEeCCCCCchh-cCe--EEEEEEcCCCCceEE----EcCCCCCcEEE--ecCCCCCcccCceEEEEECCCCCC
Confidence 7888765221100 010 012333332 11222 23566666543 333344 3888899887763
No 296
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.31 E-value=0.0002 Score=73.86 Aligned_cols=187 Identities=12% Similarity=-0.019 Sum_probs=112.9
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|+|||++|+... .+|. |+++|+.+++...... ...+..+.|+||++.|+.... ...|+.+|+
T Consensus 143 ~i~~~~~~~~~~~l~~~~-~dg~----v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~~~d~ 212 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCC-SDGN----IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL-----DNTVRSWDL 212 (337)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSC----EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-----TSEEEEEET
T ss_pred ceEEEEECCCCCEEEEEe-CCCc----EEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec-----CCcEEEEEC
Confidence 356788999999998764 4554 9999999987654332 446788999999998876642 246888898
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce-EEEEeecCCEEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEGFLYLFT 281 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~~~~dg~~l~~~t 281 (728)
.+++.. ..+.. ......+.++|||++|++...+ ..|+++|+.+ .+...+......+ ...++++++.|+..+
T Consensus 213 ~~~~~~-~~~~~--~~~v~~~~~s~~~~~l~~~~~~---~~i~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 213 REGRQL-QQHDF--TSQIFSLGYCPTGEWLAVGMES---SNVEVLHVNK--PDKYQLHLHESCVLSLKFAYCGKWFVSTG 284 (337)
T ss_dssp TTTEEE-EEEEC--SSCEEEEEECTTSSEEEEEETT---SCEEEEETTS--SCEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCceE-eeecC--CCceEEEEECCCCCEEEEEcCC---CcEEEEECCC--CCeEEEcCCccceeEEEECCCCCEEEEec
Confidence 776421 12221 2224568899999998877653 3588899987 3344443333332 335567777666544
Q ss_pred cCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEE
Q 004839 282 DAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLC 344 (728)
Q Consensus 282 n~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~ 344 (728)
..+ .|...++. . ........ ....+..+.+.. +.++++...+|.-.++
T Consensus 285 ~dg---------~i~~~~~~-~---~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 285 KDN---------LLNAWRTP-Y---GASIFQSK--ESSSVLSCDISVDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp TTS---------EEEEEETT-T---CCEEEEEE--CSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CCC---------cEEEEECC-C---CeEEEEec--CCCcEEEEEECCCCCEEEEecCCCeEEEE
Confidence 422 24444443 1 11111122 234466666654 3455555566644443
No 297
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.30 E-value=1.1e-06 Score=86.67 Aligned_cols=90 Identities=14% Similarity=0.125 Sum_probs=65.1
Q ss_pred ccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004839 496 NPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 575 (728)
Q Consensus 496 ~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 575 (728)
.|.|+++||..+.. ..|......|.+ |.|+.+|++|.+. ..+|+.+.++.+. ..+
T Consensus 17 ~~~l~~~hg~~~~~--~~~~~~~~~l~~--~~v~~~d~~g~~~----------------~~~~~~~~i~~~~-----~~~ 71 (230)
T 1jmk_C 17 EQIIFAFPPVLGYG--LMYQNLSSRLPS--YKLCAFDFIEEED----------------RLDRYADLIQKLQ-----PEG 71 (230)
T ss_dssp SEEEEEECCTTCCG--GGGHHHHHHCTT--EEEEEECCCCSTT----------------HHHHHHHHHHHHC-----CSS
T ss_pred CCCEEEECCCCCch--HHHHHHHHhcCC--CeEEEecCCCHHH----------------HHHHHHHHHHHhC-----CCC
Confidence 46789999976543 456666666654 9999999997652 3456666665542 125
Q ss_pred cEEEEEeCccHHHHHHHHHhC---CCceeEEEEeCCcc
Q 004839 576 KLAGWGYSAGGLLVAAAINCC---PDLFRAVVLEVPFL 610 (728)
Q Consensus 576 ri~i~G~S~GG~~~~~~~~~~---p~~f~a~v~~~p~~ 610 (728)
++.++|||+||.++..++.+. ++.++.+|+..+..
T Consensus 72 ~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~ 109 (230)
T 1jmk_C 72 PLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYK 109 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCE
T ss_pred CeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCC
Confidence 799999999999999888764 46788888777643
No 298
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.28 E-value=2.4e-05 Score=83.96 Aligned_cols=151 Identities=11% Similarity=0.073 Sum_probs=96.4
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccC----ccceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP----QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.+..+.|+|||+.+.++...+|. |+++|+.+++..... ....+..++|+|||+.|+.... ...|..+
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg~----i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iw 203 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDNV----ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR-----DKRVRVI 203 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTSC----EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET-----TSEEEEE
T ss_pred eEEEEEECcCCCCEEEEEcCCCE----EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec-----CCcEEEE
Confidence 46778999999544444455664 999999999765433 2446788999999998876643 2378888
Q ss_pred ECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEee-ecC-CceEEEEeecCCEEE
Q 004839 201 IIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIW-ECE-GLAHCIVEHHEGFLY 278 (728)
Q Consensus 201 ~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~-~~~-~~~~~~~~~dg~~l~ 278 (728)
|+.++.....+...........+.|+|||++|+..........|.++|+.+......... ... ......++++++.|+
T Consensus 204 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 204 EPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp ETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEE
T ss_pred eCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEE
Confidence 988764221121122222234578999999877664444567899999987432222222 122 223445678888887
Q ss_pred EEEcCC
Q 004839 279 LFTDAA 284 (728)
Q Consensus 279 ~~tn~~ 284 (728)
+....+
T Consensus 284 ~~g~~d 289 (402)
T 2aq5_A 284 LCGKGD 289 (402)
T ss_dssp EEETTC
T ss_pred EEEcCC
Confidence 766544
No 299
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.26 E-value=0.00055 Score=70.25 Aligned_cols=112 Identities=13% Similarity=0.069 Sum_probs=77.3
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..++|||||++||-.. .+| .|.++|+++++.+.... ...+..+.|+||++.|+-...+ ..|...++
T Consensus 15 ~V~~~~fsp~~~~l~s~~-~dg----~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-----~~i~vwd~ 84 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTL-YSG----RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-----FRIRVFNY 84 (304)
T ss_dssp CEEEEEECSSSSEEEEEE-TTS----EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEET
T ss_pred ceEEEEECCCCCEEEEEc-CCC----cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-----CEEEEEEC
Confidence 467788999999998764 454 49999999987554322 3456788999999987765432 36888898
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
.+++. ...+... ......+.++|++++|+..+.+ ..|.+.|+.+
T Consensus 85 ~~~~~-~~~~~~h-~~~v~~~~~~~~~~~l~sgs~D---~~v~lWd~~~ 128 (304)
T 2ynn_A 85 NTGEK-VVDFEAH-PDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWEN 128 (304)
T ss_dssp TTCCE-EEEEECC-SSCEEEEEECSSSSEEEEEETT---SCEEEEEGGG
T ss_pred CCCcE-EEEEeCC-CCcEEEEEEcCCCCEEEEECCC---CeEEEEECCC
Confidence 87642 2223322 2234578999999988755543 3477778866
No 300
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.25 E-value=0.00037 Score=71.55 Aligned_cols=195 Identities=13% Similarity=0.104 Sum_probs=112.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..++|||||++||... .+|. |.++|+.+++...... ...+..++|+||++.|+....+ ..|...++
T Consensus 25 ~v~~~~~s~~~~~l~s~~-~dg~----i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~ 94 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSS-ADKL----IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD-----KTLKIWDV 94 (312)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSC----EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEET
T ss_pred cEEEEEECCCCCEEEEee-CCCe----EEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC-----CEEEEEEC
Confidence 577788999999998774 4554 8999999887654322 3467889999999988766432 36888888
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce-EEEEeecCCEEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEGFLYLFT 281 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~~~~dg~~l~~~t 281 (728)
.++.... .+.... .....+.++|++++|+..+.+. .|.+.|+.++. ....+......+ ...+++++..|+..+
T Consensus 95 ~~~~~~~-~~~~~~-~~v~~~~~~~~~~~l~s~~~d~---~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
T 4ery_A 95 SSGKCLK-TLKGHS-NYVFCCNFNPQSNLIVSGSFDE---SVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRDGSLIVSSS 168 (312)
T ss_dssp TTCCEEE-EEECCS-SCEEEEEECSSSSEEEEEETTS---CEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcEEE-EEcCCC-CCEEEEEEcCCCCEEEEEeCCC---cEEEEECCCCE-EEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 8764222 222222 2345678999999887665543 58888987732 223332222222 234556777655443
Q ss_pred cCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecCC
Q 004839 282 DAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 282 n~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
. ++ .|...++. . ......+. ......+..+.+.. +..++....++ .+.++++.+
T Consensus 169 ~-d~--------~i~~wd~~-~--~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~--~i~iwd~~~ 223 (312)
T 4ery_A 169 Y-DG--------LCRIWDTA-S--GQCLKTLI-DDDNPPVSFVKFSPNGKYILAATLDN--TLKLWDYSK 223 (312)
T ss_dssp T-TS--------CEEEEETT-T--CCEEEEEC-CSSCCCEEEEEECTTSSEEEEEETTT--EEEEEETTT
T ss_pred C-CC--------cEEEEECC-C--CceeeEEe-ccCCCceEEEEECCCCCEEEEEcCCC--eEEEEECCC
Confidence 3 22 24344443 1 11112222 22233455555553 33444455555 466677654
No 301
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.25 E-value=0.00028 Score=74.14 Aligned_cols=249 Identities=9% Similarity=0.030 Sum_probs=126.1
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCc-EEEEEEEECCCCceec-cC-----ccceeeeEEEecCCCEEEEEEecCCCCccee
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDND-YFTLSVRNLNSGALCS-KP-----QAVRVSNIAWAKDGQALIYVVTDQNKRPYQI 197 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e-~~~l~v~dl~tg~~~~-~~-----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v 197 (728)
.+..++|||||++|+-..+....- ...+++++........ .. ....+..++|+||+ .|+.. .. ...|
T Consensus 32 ~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~-s~----dg~v 105 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVA-SD----SGAV 105 (344)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEE-ET----TSEE
T ss_pred CEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEE-EC----CCEE
Confidence 577889999999998765432210 1234444322211111 00 12357789999996 45544 32 2357
Q ss_pred EEEECCCCCc-eeEEe-eecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeE-EeeecCCceE-EEEeec
Q 004839 198 YCSIIGSTDE-DALLL-EESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLT-LIWECEGLAH-CIVEHH 273 (728)
Q Consensus 198 ~~~~l~t~~~-~~lv~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~-~l~~~~~~~~-~~~~~d 273 (728)
.+.|+.+++. ....+ ..........+.|+|||++|+..+.+. .|.+.|+.+ ++.. .+......+. ..++++
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~---~i~iwd~~~--~~~~~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI---CIKVWDLAQ--QVVLSSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTT--TEEEEEECCCSSCEEEEEECSS
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC---eEEEEECCC--CcEEEEEcCcCCceEEEEecCC
Confidence 7778877652 21111 111222345689999999987665543 478889887 3332 2322223332 345567
Q ss_pred CCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCCC
Q 004839 274 EGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 274 g~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
+..+++....++ ..+|+ ++. . ......+........+..+.+. +..+++....+|. |.++|+.++
T Consensus 181 ~~~~l~s~s~D~------~v~iw--d~~-~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~--v~~wd~~~~ 247 (344)
T 4gqb_B 181 KDSVFLSCSEDN------RILLW--DTR-C--PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT--VSLVDTKST 247 (344)
T ss_dssp CTTEEEEEETTS------CEEEE--ETT-S--SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE--EEEEESCC-
T ss_pred CCCceeeecccc------ccccc--ccc-c--cceeeeeecceeeccceeeeecCCCCcceEEeccCCc--EEEEECCCC
Confidence 766655554443 23444 443 1 1112222222233445556655 3456666666664 556676543
Q ss_pred CCCcceeecccccccccC-CCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEE
Q 004839 352 AGKGVVHLKELHPHFLPL-PKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNI 414 (728)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~-p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~ 414 (728)
+- + ..+.. ...+..+. +++++..++++.+.. ..+..+|..+++...
T Consensus 248 ~~-----~-----~~~~~h~~~v~~v~----fsp~g~~~lasgs~D---~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 248 SC-----V-----LSSAVHSQCVTGLV----FSPHSVPFLASLSED---CSLAVLDSSLSELFR 294 (344)
T ss_dssp -C-----C-----EEEECCSSCEEEEE----ECSSSSCCEEEEETT---SCEEEECTTCCEEEE
T ss_pred cE-----E-----EEEcCCCCCEEEEE----EccCCCeEEEEEeCC---CeEEEEECCCCcEEE
Confidence 20 1 11111 12233332 345565555555443 357778888876543
No 302
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.23 E-value=0.00059 Score=72.15 Aligned_cols=118 Identities=16% Similarity=0.164 Sum_probs=71.3
Q ss_pred CCCCCEEEEEEEcCCC--cEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEec-----CCCCcceeEEEECCC
Q 004839 132 SPDHKFLAYTMYDKDN--DYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTD-----QNKRPYQIYCSIIGS 204 (728)
Q Consensus 132 SPDG~~lA~~~~~~g~--e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~-----~~~~~~~v~~~~l~t 204 (728)
.||+++ +|..+.+.+ ....|+++|+++++.+.....+....++++|||+.||.+... ...+...|..+|+.+
T Consensus 12 ~~~~~~-~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 12 APQENR-IYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp SCGGGE-EEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCCE-EEEECCCCCccccCeEEEEECCCCeEEEEecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 358876 466664311 123699999999986643322222389999999988776431 111234688889887
Q ss_pred CC-ceeEEeeec---CcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 205 TD-EDALLLEES---NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 205 ~~-~~~lv~~~~---~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
.+ ...+..... ....-..+.+||||++|++.... ..+.|.++|+++
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~-~~~~v~v~d~~~ 140 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS-PATSIGIVDVAK 140 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES-SSEEEEEEETTT
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC-CCCeEEEEECCC
Confidence 65 222221100 00011236789999999876542 235688899987
No 303
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.23 E-value=0.0014 Score=69.37 Aligned_cols=200 Identities=8% Similarity=-0.007 Sum_probs=113.4
Q ss_pred EeeceeeCCCC-CEEEEEEEcCCCcEEEEEEEECCCCceeccC----ccceeeeEEEec-CCCEEEEEEecCCCCcceeE
Q 004839 125 YEELSEVSPDH-KFLAYTMYDKDNDYFTLSVRNLNSGALCSKP----QAVRVSNIAWAK-DGQALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 125 ~~~~~~~SPDG-~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~----~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~v~ 198 (728)
.+..++||||| ++||... .+|. |.|+|+.+++..... ....+..++|+| |++.|+.. .. ...|.
T Consensus 75 ~v~~~~~~~~~~~~l~s~~-~dg~----i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~-~~----d~~i~ 144 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGS-KGGD----IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS-SI----RGATT 144 (383)
T ss_dssp CEEEEEECSSCTTEEEEEE-BTSC----EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE-ET----TTEEE
T ss_pred CEEEEEECCCCCCEEEEEc-CCCe----EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEE-eC----CCEEE
Confidence 46778899999 8887764 4554 999999988755432 244678899999 55555444 32 23688
Q ss_pred EEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce-EEEEeecCCEE
Q 004839 199 CSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEGFL 277 (728)
Q Consensus 199 ~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~~~~dg~~l 277 (728)
..++.+.....+............+.|+||+++|+..+.+ ..|+++|+.. .....+......+ ...+++++..+
T Consensus 145 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~~--~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 145 LRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST---GRLLLLGLDG--HEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT---SEEEEEETTS--CEEEEEECSSSCEEEEEECSSCTTE
T ss_pred EEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC---CCEEEEECCC--CEEEEeccCCCcEEEEEECCCCCCE
Confidence 8888753222211111111234568899999988766543 4788889853 3334443333333 23456777744
Q ss_pred EEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC--CEEEEEEecCCeeEEEEEecCCC
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK--THMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
++....++ ..+|+.+... . ........+. ....+..+.+.. +.++++...++ .|.++++.++
T Consensus 220 l~s~~~d~------~i~iwd~~~~-~-~~~~~~~~~~--~~~~v~~~~~s~~~~~~l~~~~~d~--~i~iwd~~~~ 283 (383)
T 3ei3_B 220 MATSSVDA------TVKLWDLRNI-K-DKNSYIAEMP--HEKPVNAAYFNPTDSTKLLTTDQRN--EIRVYSSYDW 283 (383)
T ss_dssp EEEEETTS------EEEEEEGGGC-C-STTCEEEEEE--CSSCEEEEEECTTTSCEEEEEESSS--EEEEEETTBT
T ss_pred EEEEeCCC------EEEEEeCCCC-C-cccceEEEec--CCCceEEEEEcCCCCCEEEEEcCCC--cEEEEECCCC
Confidence 44444432 2344444321 0 0122222222 234566777664 34455555555 5667776653
No 304
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.22 E-value=0.00089 Score=69.59 Aligned_cols=196 Identities=14% Similarity=0.050 Sum_probs=111.4
Q ss_pred eceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCC
Q 004839 127 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD 206 (728)
Q Consensus 127 ~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~ 206 (728)
..+.|+||++.|.|+ +..+. .|+++|+++++.........+..+.|++||+.++ .. . ..|++++..+++
T Consensus 52 egp~~~~~~~~l~~~-d~~~~---~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v-~~-~-----~gl~~~d~~~g~ 120 (326)
T 2ghs_A 52 EGPTFDPASGTAWWF-NILER---ELHELHLASGRKTVHALPFMGSALAKISDSKQLI-AS-D-----DGLFLRDTATGV 120 (326)
T ss_dssp EEEEEETTTTEEEEE-EGGGT---EEEEEETTTTEEEEEECSSCEEEEEEEETTEEEE-EE-T-----TEEEEEETTTCC
T ss_pred cCCeEeCCCCEEEEE-ECCCC---EEEEEECCCCcEEEEECCCcceEEEEeCCCeEEE-EE-C-----CCEEEEECCCCc
Confidence 356799999988887 44433 4999999998765433344677889999997444 32 1 259999987765
Q ss_pred ceeEEeeecC--cceEEEEEEcCCCCEEEEEEcCC----CceEEEEEeCCCCCCCeEEeeecCCc-eEEEEeecCCEEEE
Q 004839 207 EDALLLEESN--ENVYVNIRHTKDFHFVCVHTFST----TSSKVFLINAADPFSGLTLIWECEGL-AHCIVEHHEGFLYL 279 (728)
Q Consensus 207 ~~~lv~~~~~--~~~~~~~~~SpDg~~l~~~~~~~----~~~~l~~~dl~~~~~~~~~l~~~~~~-~~~~~~~dg~~l~~ 279 (728)
...+...... .....++.++|||+. ++..... ....||+++ + ++.+.+...... ....+++||+.+|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l-~v~~~~~~~~~~~~~l~~~~--~--g~~~~~~~~~~~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGAL-WIGTMGRKAETGAGSIYHVA--K--GKVTKLFADISIPNSICFSPDGTTGYF 195 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCE-EEEEEETTCCTTCEEEEEEE--T--TEEEEEEEEESSEEEEEECTTSCEEEE
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCE-EEEeCCCcCCCCceEEEEEe--C--CcEEEeeCCCcccCCeEEcCCCCEEEE
Confidence 3222211111 123456789999984 4443221 246899999 3 344444332221 23356788888888
Q ss_pred EEcCCccCCCCCceEEEEeeCCC-CC-CCCCCeEEee-cCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEec
Q 004839 280 FTDAAKEGQEADNHYLLRCPVDA-SF-PSRTWESVFI-DDQGLVVEDVDFCK-THMALILREGRTYRLCSVSL 348 (728)
Q Consensus 280 ~tn~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~~li~-~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l 348 (728)
..... ..|++++.+. .. ....-+.+.. ......+.++.++. +.|++....++ .|.+++.
T Consensus 196 ~~~~~--------~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~--~v~~~d~ 258 (326)
T 2ghs_A 196 VDTKV--------NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEG--AVDRYDT 258 (326)
T ss_dssp EETTT--------CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTT--EEEEECT
T ss_pred EECCC--------CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCC--EEEEECC
Confidence 64432 3466666530 10 0011122211 11223456777664 45666554333 5778876
No 305
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.22 E-value=0.00016 Score=77.90 Aligned_cols=116 Identities=15% Similarity=0.013 Sum_probs=74.4
Q ss_pred CCCCCEEEEEEEcCCCcE-EEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecCC-----CCcceeEEEECCCC
Q 004839 132 SPDHKFLAYTMYDKDNDY-FTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQN-----KRPYQIYCSIIGST 205 (728)
Q Consensus 132 SPDG~~lA~~~~~~g~e~-~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~-----~~~~~v~~~~l~t~ 205 (728)
.||++++ |..+...... ..|.|+|+++++.+.....+....+.+||||++||.+..... .+...|..+|..+.
T Consensus 81 ~~~~~~v-yV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 81 APDARRV-YIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCCTTEE-EEEECTTTCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCCEE-EEECCCcCCCCCeEEEEECCCCEEEEEEECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 5888875 6656432111 579999999998775433222228999999999987753110 12346899998887
Q ss_pred C-ceeEEee-------ecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCC
Q 004839 206 D-EDALLLE-------ESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 206 ~-~~~lv~~-------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
+ ...+... ...+. ++.+||||++|++.... ..+.|.++|+++.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~---~~~~spDGk~lyV~n~~-~~~~VsVID~~t~ 210 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQW---MNALTPDNKNLLFYQFS-PAPAVGVVDLEGK 210 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGG---GSEECTTSSEEEEEECS-SSCEEEEEETTTT
T ss_pred cEEEEEECCCccccccCCCcc---eEEEcCCCCEEEEEecC-CCCeEEEEECCCC
Confidence 6 2233221 01111 25789999999887532 2467999999873
No 306
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.22 E-value=7.2e-05 Score=77.77 Aligned_cols=140 Identities=12% Similarity=0.101 Sum_probs=88.6
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
+..+.|||||++||... .+|. |+++|+.+++.+.... ...+..++|+||++.|+.... ...|.+.|+.
T Consensus 167 v~~~~~spdg~~lasg~-~dg~----i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~-----dg~i~iwd~~ 236 (321)
T 3ow8_A 167 ILSIAYSPDGKYLASGA-IDGI----INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-----DGYIKIYDVQ 236 (321)
T ss_dssp EEEEEECTTSSEEEEEE-TTSC----EEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECT-----TSCEEEEETT
T ss_pred EEEEEECCCCCEEEEEc-CCCe----EEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcC-----CCeEEEEECC
Confidence 56788999999998874 4554 9999999998654322 345778999999997765532 2357888887
Q ss_pred CCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE-EEEeecCCEEEEEE
Q 004839 204 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFLYLFT 281 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~t 281 (728)
++.... .+... ......+.|+|||++|+..+.+. .|.+.|+.++. ....+......+. ..+++++..|+-.+
T Consensus 237 ~~~~~~-~~~~h-~~~v~~~~~sp~~~~l~s~s~D~---~v~iwd~~~~~-~~~~~~~h~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 237 HANLAG-TLSGH-ASWVLNVAFCPDDTHFVSSSSDK---SVKVWDVGTRT-CVHTFFDHQDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp TCCEEE-EECCC-SSCEEEEEECTTSSEEEEEETTS---CEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CcceeE-EEcCC-CCceEEEEECCCCCEEEEEeCCC---cEEEEeCCCCE-EEEEEcCCCCcEEEEEECCCCCEEEEEe
Confidence 664222 22222 22346789999999887655433 47888887631 1222322223222 34556777665443
No 307
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.21 E-value=7.5e-05 Score=78.92 Aligned_cols=197 Identities=10% Similarity=-0.043 Sum_probs=114.0
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++|+-.. .+|. |+++|+.+++.+.... ...+..++|+|+++.++.+...+ ..|.+.|+
T Consensus 141 ~V~~v~~spdg~~l~sgs-~dg~----v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d----g~v~~wd~ 211 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGG-KDFS----VKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGED----GRILLWDT 211 (357)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSC----EEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETT----SCEEECCT
T ss_pred CEEEEEECCCCCEEEEEe-CCCe----EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccC----CceEEEEC
Confidence 467788999999998764 4554 9999999998665432 34677899999998666654432 35777788
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce-EEEEeecCCEEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEGFLYLFT 281 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~~~~dg~~l~~~t 281 (728)
.+++....+...........+.|+|++..+++..... ..|+++|+.++. ..+.+......+ ...++++++.+++..
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d--~~i~~wd~~~~~-~~~~~~~~~~~v~~l~~sp~~~~~lasg 288 (357)
T 4g56_B 212 RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET--GNVSLVNIKNPD-SAQTSAVHSQNITGLAYSYHSSPFLASI 288 (357)
T ss_dssp TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS--SCEEEEESSCGG-GCEEECCCSSCEEEEEECSSSSCCEEEE
T ss_pred CCCceeeeeeeccccccccchhhhhcccceEEEeecc--cceeEEECCCCc-EeEEEeccceeEEEEEEcCCCCCEEEEE
Confidence 7764221111111222345688999976555544332 358888988742 233333333333 234567777655554
Q ss_pred cCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecC
Q 004839 282 DAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLP 349 (728)
Q Consensus 282 n~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~ 349 (728)
..++ . |...+++ . .+....+. ....+..+.+. ++.+++....+|.-. +++++
T Consensus 289 s~D~------~--i~iwd~~-~---~~~~~~~~--H~~~V~~vafsP~d~~~l~s~s~Dg~v~--iW~~~ 342 (357)
T 4g56_B 289 SEDC------T--VAVLDAD-F---SEVFRDLS--HRDFVTGVAWSPLDHSKFTTVGWDHKVL--HHHLP 342 (357)
T ss_dssp ETTS------C--EEEECTT-S---CEEEEECC--CSSCEEEEEECSSSTTEEEEEETTSCEE--EEECC
T ss_pred eCCC------E--EEEEECC-C---CcEeEECC--CCCCEEEEEEeCCCCCEEEEEcCCCeEE--EEECC
Confidence 4442 2 3344443 1 22222222 23456777765 355666767777544 44543
No 308
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.19 E-value=0.00012 Score=76.19 Aligned_cols=142 Identities=11% Similarity=0.042 Sum_probs=84.6
Q ss_pred ceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cc--eeeeEEEecCCCEEEEEEecCCCCcceeEEEECCC
Q 004839 128 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AV--RVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 204 (728)
Q Consensus 128 ~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~--~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t 204 (728)
.+.++++++.++-. ...+ +|+++|+++++.+.... .. ....++|+|||+.+|++.. ....|+++++.+
T Consensus 4 g~~~~~~~~~~v~~-~~~~----~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~----~~~~i~~~d~~t 74 (349)
T 1jmx_B 4 GPALKAGHEYMIVT-NYPN----NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN----HYGDIYGIDLDT 74 (349)
T ss_dssp CCCCCTTCEEEEEE-ETTT----EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET----TTTEEEEEETTT
T ss_pred cccccCCCEEEEEe-CCCC----eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC----CCCcEEEEeCCC
Confidence 34578887765544 2333 49999999998664332 23 4678999999998877642 234799999987
Q ss_pred CCceeEEeeecC----cceEEEEEEcCCCCEEEEEEcC---------CCceEEEEEeCCCCC--CCeEEeeecCCceEEE
Q 004839 205 TDEDALLLEESN----ENVYVNIRHTKDFHFVCVHTFS---------TTSSKVFLINAADPF--SGLTLIWECEGLAHCI 269 (728)
Q Consensus 205 ~~~~~lv~~~~~----~~~~~~~~~SpDg~~l~~~~~~---------~~~~~l~~~dl~~~~--~~~~~l~~~~~~~~~~ 269 (728)
++....+..... ......+.+||||++|++.... .....|+++|++++. ................
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 154 (349)
T 1jmx_B 75 CKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMR 154 (349)
T ss_dssp TEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEE
T ss_pred CcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCccccee
Confidence 642222211111 0111246899999999887743 112579999987621 1112222111112234
Q ss_pred EeecCCEEEE
Q 004839 270 VEHHEGFLYL 279 (728)
Q Consensus 270 ~~~dg~~l~~ 279 (728)
++++|+ +|+
T Consensus 155 ~s~dg~-l~~ 163 (349)
T 1jmx_B 155 AADDGS-LYV 163 (349)
T ss_dssp ECTTSC-EEE
T ss_pred ECCCCc-EEE
Confidence 678887 666
No 309
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.18 E-value=0.00035 Score=74.27 Aligned_cols=75 Identities=7% Similarity=-0.128 Sum_probs=50.3
Q ss_pred ceeeCCCCCEEEEEEEc-----CCCcEEEEEEEECCCCceeccCc-c--------ceeeeEEEecCCCEEEEEEecCCCC
Q 004839 128 LSEVSPDHKFLAYTMYD-----KDNDYFTLSVRNLNSGALCSKPQ-A--------VRVSNIAWAKDGQALIYVVTDQNKR 193 (728)
Q Consensus 128 ~~~~SPDG~~lA~~~~~-----~g~e~~~l~v~dl~tg~~~~~~~-~--------~~~~~~~WspDg~~l~y~~~~~~~~ 193 (728)
.+.+||||++|.++... +|.....|.++|+++++.+.... . .....+.|||||++||.+....
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~--- 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA--- 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC---
Confidence 77899999999776321 22223458899999887554211 1 1234789999999998874321
Q ss_pred cceeEEEECCCCC
Q 004839 194 PYQIYCSIIGSTD 206 (728)
Q Consensus 194 ~~~v~~~~l~t~~ 206 (728)
...|..+| .+++
T Consensus 147 ~~~v~viD-~t~~ 158 (373)
T 2mad_H 147 GPAVGLVV-QGGS 158 (373)
T ss_pred CCeEEEEE-CCCC
Confidence 34688889 7765
No 310
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.16 E-value=2.3e-06 Score=89.23 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=65.5
Q ss_pred EEEEEcC--CCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004839 498 GLLHGHG--AYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 575 (728)
Q Consensus 498 ~vv~~hG--g~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 575 (728)
.|+++|| +.+. ...|......|. .+|.|+.+|.||.|....... .....+++++.+.+..++..- ....
T Consensus 91 ~l~~~hg~g~~~~--~~~~~~l~~~L~-~~~~v~~~d~~G~g~~~~~~~-----~~~~~~~~~~a~~~~~~i~~~-~~~~ 161 (319)
T 2hfk_A 91 VLVGCTGTAANGG--PHEFLRLSTSFQ-EERDFLAVPLPGYGTGTGTGT-----ALLPADLDTALDAQARAILRA-AGDA 161 (319)
T ss_dssp EEEEECCCCTTCS--TTTTHHHHHTTT-TTCCEEEECCTTCCBC---CB-----CCEESSHHHHHHHHHHHHHHH-HTTS
T ss_pred cEEEeCCCCCCCc--HHHHHHHHHhcC-CCCceEEecCCCCCCCccccc-----CCCCCCHHHHHHHHHHHHHHh-cCCC
Confidence 7889997 3332 244666666554 799999999999886310000 011235555554433333221 1235
Q ss_pred cEEEEEeCccHHHHHHHHHhC----CCceeEEEEeCCc
Q 004839 576 KLAGWGYSAGGLLVAAAINCC----PDLFRAVVLEVPF 609 (728)
Q Consensus 576 ri~i~G~S~GG~~~~~~~~~~----p~~f~a~v~~~p~ 609 (728)
++.++|+|+||.++..++.+. ++.++.+|+..+.
T Consensus 162 p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~ 199 (319)
T 2hfk_A 162 PVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPY 199 (319)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCC
T ss_pred CEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCC
Confidence 799999999999999998875 4568888887764
No 311
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.16 E-value=0.00071 Score=73.68 Aligned_cols=198 Identities=13% Similarity=0.009 Sum_probs=115.0
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceec----cCc--cceeeeEEEecC---CCEEEEEEecCCCCcc
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS----KPQ--AVRVSNIAWAKD---GQALIYVVTDQNKRPY 195 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~----~~~--~~~~~~~~WspD---g~~l~y~~~~~~~~~~ 195 (728)
.+..+.|||||++|+... ..| .++++++.+++... ... ...+..+.|+|| ++.|+....+ .
T Consensus 151 ~v~~~~~sp~~~~l~~~~-~~g----~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~ 220 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIAD-KFG----DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----E 220 (450)
T ss_dssp CEEEEEECTTSSEEEEEE-TTS----EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----S
T ss_pred CceEEEEcCCCCEEEEEe-CCC----cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----C
Confidence 356788999999998874 444 38999999887543 111 345778999999 8777655332 3
Q ss_pred eeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeec-------------
Q 004839 196 QIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWEC------------- 262 (728)
Q Consensus 196 ~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~------------- 262 (728)
.|+++++.++......... .......+.|+ ||++|+..+.+ ..|.++|+.++. ....+...
T Consensus 221 ~i~vwd~~~~~~~~~~~~~-h~~~v~~~~~s-d~~~l~s~~~d---~~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~ 294 (450)
T 2vdu_B 221 HIKISHYPQCFIVDKWLFG-HKHFVSSICCG-KDYLLLSAGGD---DKIFAWDWKTGK-NLSTFDYNSLIKPYLNDQHLA 294 (450)
T ss_dssp CEEEEEESCTTCEEEECCC-CSSCEEEEEEC-STTEEEEEESS---SEEEEEETTTCC-EEEEEECHHHHGGGCCTTSBC
T ss_pred cEEEEECCCCceeeeeecC-CCCceEEEEEC-CCCEEEEEeCC---CeEEEEECCCCc-Eeeeecchhhhhhhhhhcccc
Confidence 6888888766422221212 22334568899 99998766543 478899998732 12222210
Q ss_pred ------------CCc-eEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEE--eecCCCceEEEEEee
Q 004839 263 ------------EGL-AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESV--FIDDQGLVVEDVDFC 327 (728)
Q Consensus 263 ------------~~~-~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l--i~~~~~~~i~~~~~~ 327 (728)
... ....+.++++.|++....++ ..+|+.+.-. ....++.+ +... ..+..+.+.
T Consensus 295 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~------~i~iw~~~~~---~~~~l~~~~~~~~~--~~v~~~~~~ 363 (450)
T 2vdu_B 295 PPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATK------CIIILEMSEK---QKGDLALKQIITFP--YNVISLSAH 363 (450)
T ss_dssp ----------CBCCCEEEEEECSSSSEEEEEETTCS------EEEEEEECSS---STTCEEEEEEEECS--SCEEEEEEE
T ss_pred cccccccccccceEEEEEEEEeCCCCEEEEEECCCC------eEEEEEeccC---CCCceeeccEeccC--CceEEEEec
Confidence 011 12234567777777664432 2455655101 11223322 2222 457788888
Q ss_pred CCEEEEEEecCCe-------eEEEEEecC
Q 004839 328 KTHMALILREGRT-------YRLCSVSLP 349 (728)
Q Consensus 328 ~~~lv~~~~~~g~-------~~l~~~~l~ 349 (728)
++.+++....... -+++.++..
T Consensus 364 ~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 364 NDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp TTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 8777776644321 256666643
No 312
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.16 E-value=0.00048 Score=71.43 Aligned_cols=193 Identities=11% Similarity=0.059 Sum_probs=113.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|+|+++.+|-.. .++ .|+++|+++++.+.... ...+..++|+|||+.|+.... ...|.++++
T Consensus 82 ~v~~~~~~~~~~~l~s~s-~D~----~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~-----dg~v~i~~~ 151 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSS-LDA----HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH-----VGKVNIFGV 151 (321)
T ss_dssp CEEEEEECSSSSEEEEEE-TTS----EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECT-----TSEEEEEET
T ss_pred CEEEEEECCCCCEEEEEe-CCC----cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcC-----CCcEEEEEc
Confidence 466788999999887653 444 49999999997654322 335667999999998876532 346888888
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeE-EeeecCCc-eEEEEeecCCEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLT-LIWECEGL-AHCIVEHHEGFLYLF 280 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~-~l~~~~~~-~~~~~~~dg~~l~~~ 280 (728)
.++.... .+.. .......+.|+|||++|+..+.+. .|.+.|+.+ ++.. .+...... ....+++++..|+..
T Consensus 152 ~~~~~~~-~~~~-~~~~v~~~~~spdg~~lasg~~dg---~i~iwd~~~--~~~~~~~~~h~~~v~~l~~spd~~~l~s~ 224 (321)
T 3ow8_A 152 ESGKKEY-SLDT-RGKFILSIAYSPDGKYLASGAIDG---IINIFDIAT--GKLLHTLEGHAMPIRSLTFSPDSQLLVTA 224 (321)
T ss_dssp TTCSEEE-EEEC-SSSCEEEEEECTTSSEEEEEETTS---CEEEEETTT--TEEEEEECCCSSCCCEEEECTTSCEEEEE
T ss_pred CCCceeE-EecC-CCceEEEEEECCCCCEEEEEcCCC---eEEEEECCC--CcEEEEEcccCCceeEEEEcCCCCEEEEE
Confidence 7765322 2222 223456789999999988766543 588889987 3332 23222222 233556777755543
Q ss_pred EcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecCC
Q 004839 281 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 281 tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
..++ ..+|+ ++. . ......+.. ....+..+.+.. +..++....++. +.++++.+
T Consensus 225 -s~dg------~i~iw--d~~-~---~~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~D~~--v~iwd~~~ 279 (321)
T 3ow8_A 225 -SDDG------YIKIY--DVQ-H---ANLAGTLSG-HASWVLNVAFCPDDTHFVSSSSDKS--VKVWDVGT 279 (321)
T ss_dssp -CTTS------CEEEE--ETT-T---CCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSC--EEEEETTT
T ss_pred -cCCC------eEEEE--ECC-C---cceeEEEcC-CCCceEEEEECCCCCEEEEEeCCCc--EEEEeCCC
Confidence 3332 23444 433 1 122222222 233466666654 344555556653 55666654
No 313
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.15 E-value=8.3e-05 Score=78.78 Aligned_cols=148 Identities=9% Similarity=-0.022 Sum_probs=81.6
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECC-CCceeccCc------cceeeeEEEecCCCEEEEEEecCCCCcceeE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLN-SGALCSKPQ------AVRVSNIAWAKDGQALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~-tg~~~~~~~------~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~ 198 (728)
...+.|||||++|+.+ +.+.+ .|+++|++ +|+...... ......++|+|||+.||...... ..-.+|
T Consensus 147 ~~~~~~spdG~~l~~~-~~~~~---~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~--~~v~v~ 220 (365)
T 1jof_A 147 IHGMVFDPTETYLYSA-DLTAN---KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG--NRICEY 220 (365)
T ss_dssp EEEEEECTTSSEEEEE-ETTTT---EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT--TEEEEE
T ss_pred ceEEEECCCCCEEEEE-cCCCC---EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC--CeEEEE
Confidence 4567899999988554 54332 58999998 787543211 12456789999999887663221 122344
Q ss_pred EEECCCCCce---eEEeeecC---c-c-------eEEEEE-EcCCCCEEEEEEcCCC---ceEEEEEeCCCCCCCeEEe-
Q 004839 199 CSIIGSTDED---ALLLEESN---E-N-------VYVNIR-HTKDFHFVCVHTFSTT---SSKVFLINAADPFSGLTLI- 259 (728)
Q Consensus 199 ~~~l~t~~~~---~lv~~~~~---~-~-------~~~~~~-~SpDg~~l~~~~~~~~---~~~l~~~dl~~~~~~~~~l- 259 (728)
.++..+++.. ..+...+. . . ....+. +||||++|++...... ...|.+++++. .++...+
T Consensus 221 ~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~-~g~~~~~~ 299 (365)
T 1jof_A 221 VIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD-CGSIEKQL 299 (365)
T ss_dssp EECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT-TSCEEEEE
T ss_pred EEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC-CCCEEEee
Confidence 4444444311 11111111 0 1 345688 9999999976554322 12566666642 1444432
Q ss_pred --ee--cCCceEEEEee---cCCEEEEE
Q 004839 260 --WE--CEGLAHCIVEH---HEGFLYLF 280 (728)
Q Consensus 260 --~~--~~~~~~~~~~~---dg~~l~~~ 280 (728)
.+ ........+++ ||+.||+.
T Consensus 300 ~~~~~~~~~~~~~a~sp~~~dg~~l~v~ 327 (365)
T 1jof_A 300 FLSPTPTSGGHSNAVSPCPWSDEWMAIT 327 (365)
T ss_dssp EEEECSSCCTTCCCEEECTTCTTEEEEE
T ss_pred eeeecCCCCcccceecCCCcCCCEEEEE
Confidence 21 11223345678 68776654
No 314
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.14 E-value=0.00066 Score=76.67 Aligned_cols=197 Identities=10% Similarity=0.068 Sum_probs=110.3
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCC----ceeccC-c-cce-eeeEEEec--CCCEEEEEEecCCCCcc
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSG----ALCSKP-Q-AVR-VSNIAWAK--DGQALIYVVTDQNKRPY 195 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg----~~~~~~-~-~~~-~~~~~Wsp--Dg~~l~y~~~~~~~~~~ 195 (728)
.+..++|||||++||+.. ++ .|.|+|++++ +..... . ... +..++|+| |++.|+....+ .
T Consensus 20 ~v~~~~~spdg~~l~~~~--~~----~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~d-----g 88 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPC--GK----SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDES-----G 88 (615)
T ss_dssp CCCCCEEETTTTEEEEEE--TT----EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETT-----S
T ss_pred ceeEEEECCCCCEEEEec--CC----eEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCC-----C
Confidence 467788999999999986 23 4999999988 543322 2 346 88999999 99988765432 3
Q ss_pred eeEEEECCCC------C-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCC-ceEEEEEeCCCCCCCeEEeeecCCce-
Q 004839 196 QIYCSIIGST------D-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT-SSKVFLINAADPFSGLTLIWECEGLA- 266 (728)
Q Consensus 196 ~v~~~~l~t~------~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~l~~~dl~~~~~~~~~l~~~~~~~- 266 (728)
.|.+.++.++ . .....+.... .....+.|+|||++|+....... ...|+++|... ....+......+
T Consensus 89 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~---~~~~~~~~~~~v~ 164 (615)
T 1pgu_A 89 KVIVWGWTFDKESNSVEVNVKSEFQVLA-GPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN---SLGEVSGHSQRIN 164 (615)
T ss_dssp EEEEEEEEEEGGGTEEEEEEEEEEECCS-SCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC---EEEECCSCSSCEE
T ss_pred EEEEEeCCCCcccccccccccchhhccc-ccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC---cceeeecCCccEE
Confidence 5666666433 1 1111222222 23456899999999988775432 35677777321 233333222222
Q ss_pred EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCc---eEEEEEeeCC--EEEEEEecCCee
Q 004839 267 HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGL---VVEDVDFCKT--HMALILREGRTY 341 (728)
Q Consensus 267 ~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~---~i~~~~~~~~--~lv~~~~~~g~~ 341 (728)
...+++++..+++....++ ..+++ +.. . ......+.. ... .+..+.+..+ .++++...+|
T Consensus 165 ~~~~~~~~~~~l~~~~~d~------~v~vw--d~~-~---~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg-- 229 (615)
T 1pgu_A 165 ACHLKQSRPMRSMTVGDDG------SVVFY--QGP-P---FKFSASDRT-HHKQGSFVRDVEFSPDSGEFVITVGSDR-- 229 (615)
T ss_dssp EEEECSSSSCEEEEEETTT------EEEEE--ETT-T---BEEEEEECS-SSCTTCCEEEEEECSTTCCEEEEEETTC--
T ss_pred EEEECCCCCcEEEEEeCCC------cEEEE--eCC-C---cceeeeecc-cCCCCceEEEEEECCCCCCEEEEEeCCC--
Confidence 2345677764444444332 23343 433 1 111111222 122 4666666643 4555555555
Q ss_pred EEEEEecCCC
Q 004839 342 RLCSVSLPLP 351 (728)
Q Consensus 342 ~l~~~~l~~~ 351 (728)
.+.++++.++
T Consensus 230 ~i~vwd~~~~ 239 (615)
T 1pgu_A 230 KISCFDGKSG 239 (615)
T ss_dssp CEEEEETTTC
T ss_pred eEEEEECCCC
Confidence 4666776543
No 315
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.13 E-value=0.00045 Score=73.89 Aligned_cols=201 Identities=12% Similarity=0.063 Sum_probs=110.9
Q ss_pred EeeceeeCC-CCCEEEEEEEcCCCcEEEEEEEECCCCce-------ecc-C-ccceeeeEEEecCCCEEEEEEecCCCCc
Q 004839 125 YEELSEVSP-DHKFLAYTMYDKDNDYFTLSVRNLNSGAL-------CSK-P-QAVRVSNIAWAKDGQALIYVVTDQNKRP 194 (728)
Q Consensus 125 ~~~~~~~SP-DG~~lA~~~~~~g~e~~~l~v~dl~tg~~-------~~~-~-~~~~~~~~~WspDg~~l~y~~~~~~~~~ 194 (728)
.+..+.||| |+++||... .+| .|.|+|+.++.. ... . ....+..++|+||++.++++... .
T Consensus 83 ~V~~~~~~p~~~~~l~s~s-~dg----~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~----d 153 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGS-EDC----TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC----D 153 (402)
T ss_dssp CEEEEEECTTCTTEEEEEE-TTS----EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET----T
T ss_pred CEEEEEeCCCCCCEEEEEe-CCC----eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC----C
Confidence 577889999 899887764 444 399999998842 111 1 13467889999999545555443 2
Q ss_pred ceeEEEECCCCCceeEEee-ecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC---ceEEEE
Q 004839 195 YQIYCSIIGSTDEDALLLE-ESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG---LAHCIV 270 (728)
Q Consensus 195 ~~v~~~~l~t~~~~~lv~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~---~~~~~~ 270 (728)
..|.+.|+.+++.. ..+. .........+.|+|||++|+..+.+ ..|+++|+.++. ....+..... .....+
T Consensus 154 g~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 154 NVILVWDVGTGAAV-LTLGPDVHPDTIYSVDWSRDGALICTSCRD---KRVRVIEPRKGT-VVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp SCEEEEETTTTEEE-EEECTTTCCSCEEEEEECTTSSCEEEEETT---SEEEEEETTTTE-EEEEEECSSCSSSCCEEEE
T ss_pred CEEEEEECCCCCcc-EEEecCCCCCceEEEEECCCCCEEEEEecC---CcEEEEeCCCCc-eeeeeccCCCCCcceEEEE
Confidence 36888898876422 2221 1122234578999999998776653 468999998732 2222212222 123445
Q ss_pred eecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEec
Q 004839 271 EHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSL 348 (728)
Q Consensus 271 ~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l 348 (728)
++++..|+...+... +..|...++. ... ..... ........+..+.+. ++.|++....+|. |.++++
T Consensus 229 ~~~~~~l~~g~~~~~------d~~i~iwd~~-~~~-~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~--i~i~d~ 297 (402)
T 2aq5_A 229 VSEGKILTTGFSRMS------ERQVALWDTK-HLE-EPLSL-QELDTSSGVLLPFFDPDTNIVYLCGKGDSS--IRYFEI 297 (402)
T ss_dssp CSTTEEEEEEECTTC------CEEEEEEETT-BCS-SCSEE-EECCCCSSCEEEEEETTTTEEEEEETTCSC--EEEEEE
T ss_pred cCCCcEEEEeccCCC------CceEEEEcCc-ccc-CCceE-EeccCCCceeEEEEcCCCCEEEEEEcCCCe--EEEEEe
Confidence 566554443322111 2345555554 211 11121 111122234444444 4566666655664 555555
Q ss_pred CC
Q 004839 349 PL 350 (728)
Q Consensus 349 ~~ 350 (728)
.+
T Consensus 298 ~~ 299 (402)
T 2aq5_A 298 TS 299 (402)
T ss_dssp CS
T ss_pred cC
Confidence 44
No 316
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.13 E-value=0.0009 Score=75.14 Aligned_cols=261 Identities=11% Similarity=0.057 Sum_probs=142.2
Q ss_pred eceeeC----CCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCcc-------------ceeeeEEEecCCCEEEEEEec
Q 004839 127 ELSEVS----PDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA-------------VRVSNIAWAKDGQALIYVVTD 189 (728)
Q Consensus 127 ~~~~~S----PDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~-------------~~~~~~~WspDg~~l~y~~~~ 189 (728)
..+.+| |||++++.+....+ ++.|+|.++.+.+..... .+...+..|+++..+++...
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~----~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~- 317 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPP----QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK- 317 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETT----EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET-
T ss_pred ceeEEccccCCCCCEEEEEEccCC----eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec-
Confidence 467899 79999877644333 478999999886653211 13456788999887666542
Q ss_pred CCCCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeec--C---C
Q 004839 190 QNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWEC--E---G 264 (728)
Q Consensus 190 ~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~--~---~ 264 (728)
...+|+.+|..+.... .+..-....+..+..|+|||+|+++..+. .+.|.++|++++ +.....+- . .
T Consensus 318 ---~~g~v~~vd~~~~~~~-~v~~i~~~~~~~d~~~~pdgr~~~va~~~--sn~V~ViD~~t~--kl~~~i~vgg~~Php 389 (567)
T 1qks_A 318 ---ETGKILLVDYTDLNNL-KTTEISAERFLHDGGLDGSHRYFITAANA--RNKLVVIDTKEG--KLVAIEDTGGQTPHP 389 (567)
T ss_dssp ---TTTEEEEEETTCSSEE-EEEEEECCSSEEEEEECTTSCEEEEEEGG--GTEEEEEETTTT--EEEEEEECSSSSBCC
T ss_pred ---CCCeEEEEecCCCccc-eeeeeeccccccCceECCCCCEEEEEeCC--CCeEEEEECCCC--cEEEEEeccCcCCCC
Confidence 2458999998665311 12111223455567899999999887763 457999999873 33222222 1 1
Q ss_pred c-eEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCC-CCCCCCCeEEe--ecC-CC-ceEEEEEeeCCEEEEEEecC
Q 004839 265 L-AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDA-SFPSRTWESVF--IDD-QG-LVVEDVDFCKTHMALILREG 338 (728)
Q Consensus 265 ~-~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~li--~~~-~~-~~i~~~~~~~~~lv~~~~~~ 338 (728)
+ ....+.++++.+|+..+.+. ..|..++.+. .-....|+.+- ... .+ ..+ .....++++++...-+
T Consensus 390 g~g~~~~~p~~g~v~~t~~~g~-------~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i-~~~p~~~~l~v~~~~~ 461 (567)
T 1qks_A 390 GRGANFVHPTFGPVWATSHMGD-------DSVALIGTDPEGHPDNAWKILDSFPALGGGSLFI-KTHPNSQYLYVDATLN 461 (567)
T ss_dssp TTCEEEEETTTEEEEEEEBSSS-------SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCE-ECCTTCSEEEEECTTC
T ss_pred ccceeeECCCCCcEEEeCCCCC-------CeEEEecCCCCCCccccCEEEEEEecCCCCCEEE-EeCCCCCeEEEecCCC
Confidence 1 11124556677776555442 2355555440 00112376432 211 11 111 1233346777765433
Q ss_pred C----eeEEEEEecCCC--CCCcceeecccccccc----cCCCceeeeecCCCccCCCcEEEEEE-ccCCCCceEEEEEC
Q 004839 339 R----TYRLCSVSLPLP--AGKGVVHLKELHPHFL----PLPKYVSQIVPGPNYDYYSSTMRFAI-SSPVMPDAVVDYDL 407 (728)
Q Consensus 339 g----~~~l~~~~l~~~--~~~~~~~~~~~~~~~~----~~p~~~~~i~~~~~~~~~~~~~~~~~-ss~~~p~~~~~~~~ 407 (728)
. ...|.++|+.+. .|... .+ +...+ .+|+..-.+. ...++.+++.+.++. +.-.....|..+|.
T Consensus 462 ~~~~~~~~v~v~d~~~~~~~g~~~-~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 462 PEAEISGSVAVFDIKAMTGDGSDP-EF---KTLPIAEWAGITEGQPRVV-QGEFNKDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp SSHHHHTCEEEEEGGGCCCSSSCC-CE---EEECHHHHHTCCSSCCEEE-EEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred CCcccCceEEEEECCcccccccCC-Cc---EEeccccccccCCCCcceE-eeeECCCCCEEEEEeecCCCCCCcEEEEEC
Confidence 2 346888887653 11000 00 00111 1222111111 223567888888875 33346679999999
Q ss_pred CCCeEE
Q 004839 408 SYGKWN 413 (728)
Q Consensus 408 ~~~~~~ 413 (728)
++++++
T Consensus 537 ~t~~~~ 542 (567)
T 1qks_A 537 KTLELK 542 (567)
T ss_dssp TTTEEE
T ss_pred CCceEE
Confidence 988764
No 317
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=98.12 E-value=3.4e-06 Score=86.09 Aligned_cols=103 Identities=15% Similarity=0.163 Sum_probs=68.0
Q ss_pred EEEEEcCCCCCCcC-cccHHHHHHHHHC--CeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHH-HHHHHHHHcCCCC
Q 004839 498 GLLHGHGAYGELLD-KRWRSELKSLLDR--GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFI-SCARFLIEKEIVK 573 (728)
Q Consensus 498 ~vv~~hGg~~~~~~-~~~~~~~~~l~~~--Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~-~~~~~l~~~~~~d 573 (728)
.||++||..++... ..|......|.++ ||.|+.+|+ |+|.+..... + +. ..+.+.+ +.++.+......
T Consensus 7 pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~--~---~~-~~~~~~~~~~~~~l~~~~~l- 78 (279)
T 1ei9_A 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVEN--S---FF-LNVNSQVTTVCQILAKDPKL- 78 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHH--H---HH-SCHHHHHHHHHHHHHSCGGG-
T ss_pred cEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCcccccc--c---cc-cCHHHHHHHHHHHHHhhhhc-
Confidence 38899996554322 3577888888875 999999997 8874311000 0 00 1333333 334444321111
Q ss_pred CCcEEEEEeCccHHHHHHHHHhCCCc-eeEEEEeCC
Q 004839 574 EHKLAGWGYSAGGLLVAAAINCCPDL-FRAVVLEVP 608 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~~~p~~-f~a~v~~~p 608 (728)
.+++.++||||||.++..++.++|+. ++.+|+.++
T Consensus 79 ~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~ 114 (279)
T 1ei9_A 79 QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGG 114 (279)
T ss_dssp TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESC
T ss_pred cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecC
Confidence 26899999999999999999999984 999987765
No 318
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.11 E-value=0.00029 Score=71.94 Aligned_cols=237 Identities=9% Similarity=0.004 Sum_probs=127.0
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 204 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t 204 (728)
...+.|+|||+.|.++....+ .|+++|++++ ...... ......++++|||+ |+.+.. ....|++++..+
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~----~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~-l~v~~~----~~~~i~~~d~~~ 99 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQN----RTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGH-LIACSH----GLRRLERQREPG 99 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGT----EEEEEETTSC-EEEEESSCSSEEEEEECTTCC-EEEEET----TTTEEEEECSTT
T ss_pred ccCCeEeCCCCEEEEEeCCCC----EEEEEECCCC-eEEEECCCCCcceeeECCCCc-EEEEec----CCCeEEEEcCCC
Confidence 346789999998877643333 4999999988 433322 33567899999998 544432 224799999877
Q ss_pred CCceeEEeeecCcc--eEEEEEEcCCCCEEEEEEcC---------------CCceEEEEEeCCCCCCCeEEeeecCCc-e
Q 004839 205 TDEDALLLEESNEN--VYVNIRHTKDFHFVCVHTFS---------------TTSSKVFLINAADPFSGLTLIWECEGL-A 266 (728)
Q Consensus 205 ~~~~~lv~~~~~~~--~~~~~~~SpDg~~l~~~~~~---------------~~~~~l~~~dl~~~~~~~~~l~~~~~~-~ 266 (728)
++...+........ ...++.++|||+. +++... .....||.++.+. ....+...... .
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l-~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g---~~~~~~~~~~~~~ 175 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSL-WFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG---TLSAPIRDRVKPN 175 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCE-EEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS---CEEEEECCCSSEE
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCE-EEECCccccccccccccccccCCCcEEEEECCCC---CEEEeecCCCCCc
Confidence 65322221111111 1134788999984 443211 1134799998762 34444433222 2
Q ss_pred EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCC---eEEeecCCCceEEEEEeeC-CEEEEEEecCCeeE
Q 004839 267 HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTW---ESVFIDDQGLVVEDVDFCK-THMALILREGRTYR 342 (728)
Q Consensus 267 ~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~ 342 (728)
...++++|+.| + ++... ..|++++++ . .+.. ..++ ......+.++.+.. +.|++.. + ..
T Consensus 176 gi~~s~dg~~l-v-~~~~~-------~~i~~~~~~-~--~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~--~~ 238 (296)
T 3e5z_A 176 GLAFLPSGNLL-V-SDTGD-------NATHRYCLN-A--RGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--G--DG 238 (296)
T ss_dssp EEEECTTSCEE-E-EETTT-------TEEEEEEEC-S--SSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--T--TE
T ss_pred cEEECCCCCEE-E-EeCCC-------CeEEEEEEC-C--CCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--C--Ce
Confidence 33567788776 4 44322 246666553 1 1223 2233 21222334555553 4566665 2 35
Q ss_pred EEEEecCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeE
Q 004839 343 LCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKW 412 (728)
Q Consensus 343 l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~ 412 (728)
|.+++.. ++ .+ ..+..|.....+..+ ..+++.|.++-. ..+++++++++++
T Consensus 239 v~~~~~~-g~-----~~-----~~~~~~~~~~~~~f~---~~d~~~L~v~t~-----~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 239 VHVLTPD-GD-----EL-----GRVLTPQTTSNLCFG---GPEGRTLYMTVS-----TEFWSIETNVRGL 289 (296)
T ss_dssp EEEECTT-SC-----EE-----EEEECSSCCCEEEEE---STTSCEEEEEET-----TEEEEEECSCCBC
T ss_pred EEEECCC-CC-----EE-----EEEECCCCceeEEEE---CCCCCEEEEEcC-----CeEEEEEcccccc
Confidence 7788764 21 11 123333322222211 345566665433 2899999877654
No 319
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.11 E-value=0.0015 Score=74.41 Aligned_cols=195 Identities=8% Similarity=-0.055 Sum_probs=109.2
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccC-c-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP-Q-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~-~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
...+.|||||++||+.. ++ .++++|+++++..... . ...+..++|||||+.|+-...+ ..|.+.|+.
T Consensus 21 ~~~~~~spdg~~l~~~~--~~----~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d-----~~v~lWd~~ 89 (611)
T 1nr0_A 21 AVVLGNTPAGDKIQYCN--GT----SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH-----GNVRIWDTT 89 (611)
T ss_dssp CCCCEECTTSSEEEEEE--TT----EEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEESS
T ss_pred eeEEeeCCCCCEEEeCC--CC----EEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCC-----CCEEEeECC
Confidence 44567999999999975 22 4899999887654432 2 4467889999999988765432 357777876
Q ss_pred CCCce-eEEeeecCcceEEEEEEcCCCCEEEEEEcCCC-ceEEEEEeCCCCCCCeEEeeecCCce-EEEEeecCCEEEEE
Q 004839 204 STDED-ALLLEESNENVYVNIRHTKDFHFVCVHTFSTT-SSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEGFLYLF 280 (728)
Q Consensus 204 t~~~~-~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~~~~dg~~l~~~ 280 (728)
++... ...+.... .....++|||||+.|+....... ...+++.|... ....+......+ ...+++++...++.
T Consensus 90 ~~~~~~~~~~~~~~-~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~---~~~~l~gh~~~v~~v~f~p~~~~~l~s 165 (611)
T 1nr0_A 90 QTTHILKTTIPVFS-GPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT---SNGNLTGQARAMNSVDFKPSRPFRIIS 165 (611)
T ss_dssp STTCCEEEEEECSS-SCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC---BCBCCCCCSSCEEEEEECSSSSCEEEE
T ss_pred CCcceeeEeecccC-CceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC---CcceecCCCCCceEEEECCCCCeEEEE
Confidence 54321 11222222 23457899999999887665432 34677777532 112222222222 23456776644444
Q ss_pred EcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecCC
Q 004839 281 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 281 tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
...++ ..+|+. .. ..+....+. .....+..+.+.. +.+++....++. +.++++.+
T Consensus 166 ~s~D~------~v~lwd--~~----~~~~~~~l~-~H~~~V~~v~fspdg~~las~s~D~~--i~lwd~~~ 221 (611)
T 1nr0_A 166 GSDDN------TVAIFE--GP----PFKFKSTFG-EHTKFVHSVRYNPDGSLFASTGGDGT--IVLYNGVD 221 (611)
T ss_dssp EETTS------CEEEEE--TT----TBEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSC--EEEEETTT
T ss_pred EeCCC------eEEEEE--CC----CCeEeeeec-cccCceEEEEECCCCCEEEEEECCCc--EEEEECCC
Confidence 44332 244553 22 111222222 2234566666664 445666666664 55566544
No 320
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.00017 Score=77.21 Aligned_cols=205 Identities=4% Similarity=-0.036 Sum_probs=110.9
Q ss_pred EeeceeeCCCCCEEEEEEEcCC------CcEEEEEEEECCCCcee---ccC-ccceeeeEEEecCCCEEEEEEecCCCCc
Q 004839 125 YEELSEVSPDHKFLAYTMYDKD------NDYFTLSVRNLNSGALC---SKP-QAVRVSNIAWAKDGQALIYVVTDQNKRP 194 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g------~e~~~l~v~dl~tg~~~---~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~ 194 (728)
.+..++|||||+.+.++.+..| .....|+|+|+.+++.. ... ....+..++|+||++.|+....+
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----- 88 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN----- 88 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS-----
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC-----
Confidence 5667789999984444443333 33456999999988632 211 24467899999999988776432
Q ss_pred ceeEEEECCCC---CceeEEeeecCcceEEEEEEcCC-CCEEEEEEcCCCceEEEEEeCCCCCC-----CeEEe---eec
Q 004839 195 YQIYCSIIGST---DEDALLLEESNENVYVNIRHTKD-FHFVCVHTFSTTSSKVFLINAADPFS-----GLTLI---WEC 262 (728)
Q Consensus 195 ~~v~~~~l~t~---~~~~lv~~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~l~~~dl~~~~~-----~~~~l---~~~ 262 (728)
..|.++++.+. ......+..... ....+.|+|| +++|+..+.+ ..|++.|+.+... ....+ ...
T Consensus 89 g~v~vw~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 89 GSLELYSTNEANNAINSMARFSNHSS-SVKTVKFNAKQDNVLASGGNN---GEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp SCEEEECCSSTTSCCCEEEECCCSSS-CCCEEEECSSSTTBEEEECSS---SCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred CeEEEeecccccccccchhhccCCcc-ceEEEEEcCCCCCEEEEEcCC---CeEEEEECCCCccccccccccccccccCC
Confidence 35777787662 112222222222 2345789999 6666544432 3588888876431 11111 111
Q ss_pred CCc-eEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCC-----CceEEEEEeeCC--EEEEE
Q 004839 263 EGL-AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQ-----GLVVEDVDFCKT--HMALI 334 (728)
Q Consensus 263 ~~~-~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~-----~~~i~~~~~~~~--~lv~~ 334 (728)
... ....++++++.+++....++ .|...++. . ......+.... ...+..+.+..+ .+++.
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg--------~v~iwd~~-~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSN--------FASIWDLK-A---KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSS--------CEEEEETT-T---TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCC--------CEEEEECC-C---CCcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 111 23345677555555544432 24444443 1 11111122111 345677777653 45666
Q ss_pred EecCC-eeEEEEEecCC
Q 004839 335 LREGR-TYRLCSVSLPL 350 (728)
Q Consensus 335 ~~~~g-~~~l~~~~l~~ 350 (728)
...++ ...|.++++.+
T Consensus 233 ~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 233 ATGSDNDPSILIWDLRN 249 (416)
T ss_dssp EECCSSSCCCCEEETTS
T ss_pred EECCCCCceEEEEeCCC
Confidence 55554 23577777764
No 321
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.10 E-value=0.00083 Score=71.84 Aligned_cols=194 Identities=11% Similarity=0.019 Sum_probs=112.2
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++||... .+|. |.++|+.+++.+.... ...+..+.| +++.|+... . ...|..+++
T Consensus 136 ~v~~v~~s~~~~~l~~~~-~dg~----i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~----dg~i~i~d~ 203 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGL-GNGL----VDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGS-R----SGAIHHHDV 203 (401)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSC----EEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEE-T----TSEEEEEET
T ss_pred CEEEEEECCCCCEEEEEC-CCCe----EEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEc-C----CCCEEEEec
Confidence 467789999999998875 4553 9999999987655332 446778889 455555543 2 247888898
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeE-EeeecCCc-eEEEEeecCCEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLT-LIWECEGL-AHCIVEHHEGFLYLF 280 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~-~l~~~~~~-~~~~~~~dg~~l~~~ 280 (728)
.+.......+.... .....+.|+|||++|+..+.+ ..|+++|+.+ +... .+...... ....+.+++..+++.
T Consensus 204 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~--~~~~~~~~~~~~~v~~~~~~p~~~~ll~~ 277 (401)
T 4aez_A 204 RIANHQIGTLQGHS-SEVCGLAWRSDGLQLASGGND---NVVQIWDARS--SIPKFTKTNHNAAVKAVAWCPWQSNLLAT 277 (401)
T ss_dssp TSSSCEEEEEECCS-SCEEEEEECTTSSEEEEEETT---SCEEEEETTC--SSEEEEECCCSSCCCEEEECTTSTTEEEE
T ss_pred ccCcceeeEEcCCC-CCeeEEEEcCCCCEEEEEeCC---CeEEEccCCC--CCccEEecCCcceEEEEEECCCCCCEEEE
Confidence 75443333333322 234568999999998876654 3588899987 3333 23222222 234556777777665
Q ss_pred EcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC--CEEEEEEe-cCCeeEEEEEecCC
Q 004839 281 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK--THMALILR-EGRTYRLCSVSLPL 350 (728)
Q Consensus 281 tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~--~~lv~~~~-~~g~~~l~~~~l~~ 350 (728)
..... +..|...++. . ......+.. ...+..+.+.. +.++.... .+| .+.++++.+
T Consensus 278 ~~gs~------d~~i~i~d~~-~---~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~g~~dg--~i~v~~~~~ 336 (401)
T 4aez_A 278 GGGTM------DKQIHFWNAA-T---GARVNTVDA--GSQVTSLIWSPHSKEIMSTHGFPDN--NLSIWSYSS 336 (401)
T ss_dssp ECCTT------TCEEEEEETT-T---CCEEEEEEC--SSCEEEEEECSSSSEEEEEECTTTC--EEEEEEEET
T ss_pred ecCCC------CCEEEEEECC-C---CCEEEEEeC--CCcEEEEEECCCCCeEEEEeecCCC--cEEEEecCC
Confidence 54111 1235555554 1 222222222 33466666654 34444322 444 455555543
No 322
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.09 E-value=0.00012 Score=77.58 Aligned_cols=157 Identities=13% Similarity=0.134 Sum_probs=95.4
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceecc-Cc---cceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK-PQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~-~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.+..+.|||||++||...+ +. +.+++..+++.... +. ...+..++|+|||+.|+....+. .....++..
T Consensus 178 ~V~~v~fspdg~~l~s~s~--~~----~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~-~~~~~i~~~ 250 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYITG--SS----LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKK-GKGIVLTKI 250 (365)
T ss_dssp CCCEEEECTTSSEEEEECS--SC----EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESS-SCCEEEEEE
T ss_pred ceEEEEEccCCceEEeccc--ee----EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCC-cceeEEeec
Confidence 4677899999999998742 22 77888888875432 11 33567899999999887775543 233356666
Q ss_pred ECCCCCceeE-Eee-ecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCe-EEeeec-CCce-EEEEeecCC
Q 004839 201 IIGSTDEDAL-LLE-ESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL-TLIWEC-EGLA-HCIVEHHEG 275 (728)
Q Consensus 201 ~l~t~~~~~l-v~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~-~~l~~~-~~~~-~~~~~~dg~ 275 (728)
++........ ... .........+.+||||++|+..+.+. .|.++|+.+ +++ ..+... ...+ ...++|||+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~---~V~iwd~~~--~~~~~~~~~gH~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 251 SIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN---SIALVKLKD--LSMSKIFKQAHSFAITEVTISPDST 325 (365)
T ss_dssp EEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS---CEEEEETTT--TEEEEEETTSSSSCEEEEEECTTSC
T ss_pred ccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC---EEEEEECCC--CcEEEEecCcccCCEEEEEECCCCC
Confidence 6655431111 111 11122245688999999988766543 488899987 333 222222 2222 335678888
Q ss_pred EEEEEEcCCccCCCCCceEEEEeeC
Q 004839 276 FLYLFTDAAKEGQEADNHYLLRCPV 300 (728)
Q Consensus 276 ~l~~~tn~~~~~~~~~~~~l~~~~~ 300 (728)
.|+-.+. ++ ..+|+.++.
T Consensus 326 ~laS~S~-D~------tvrvw~ip~ 343 (365)
T 4h5i_A 326 YVASVSA-AN------TIHIIKLPL 343 (365)
T ss_dssp EEEEEET-TS------EEEEEECCT
T ss_pred EEEEEeC-CC------eEEEEEcCC
Confidence 6665443 32 366777654
No 323
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.08 E-value=0.0037 Score=65.13 Aligned_cols=193 Identities=10% Similarity=0.020 Sum_probs=106.7
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++||-.. .+| .|+|+|+.+++...... ...+..++|+|||+.|+....+ ..|..+++
T Consensus 57 ~v~~~~~s~d~~~l~s~s-~Dg----~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----~~v~iw~~ 126 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSAS-QDG----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD-----NICSIYNL 126 (340)
T ss_dssp CEEEEEECTTSSEEEEEE-TTT----EEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT-----CEEEEEET
T ss_pred ceEEEEECCCCCEEEEEe-CCC----cEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC-----CeEEEEEC
Confidence 567788999999987664 455 49999999987654322 3456789999999987765432 35777787
Q ss_pred CCCCce-eEE--eeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeee-cCCce-EEEEeecCCEE
Q 004839 203 GSTDED-ALL--LEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWE-CEGLA-HCIVEHHEGFL 277 (728)
Q Consensus 203 ~t~~~~-~lv--~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~-~~~~~-~~~~~~dg~~l 277 (728)
.+.... .+. +.. .......+.++++++ |+..+.+ ..|.+.|+.+ +....... ....+ ...+++++..|
T Consensus 127 ~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~-l~s~s~d---~~i~~wd~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l 199 (340)
T 1got_B 127 KTREGNVRVSRELAG-HTGYLSCCRFLDDNQ-IVTSSGD---TTCALWDIET--GQQTTTFTGHTGDVMSLSLAPDTRLF 199 (340)
T ss_dssp TTCSBSCEEEEEEEC-CSSCEEEEEEEETTE-EEEEETT---SCEEEEETTT--TEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred ccCCCcceeEEEecC-CCccEEEEEECCCCc-EEEEECC---CcEEEEECCC--CcEEEEEcCCCCceEEEEECCCCCEE
Confidence 665311 111 111 222334567888886 4333332 3478889877 33322222 22222 23445666644
Q ss_pred EEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecCC
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
+.. ..++ ..+|+ ++. . ......+.. ....+..+.+.. +.+++....+|. +.++|+..
T Consensus 200 ~sg-~~d~------~v~~w--d~~-~---~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~d~~--v~iwd~~~ 257 (340)
T 1got_B 200 VSG-ACDA------SAKLW--DVR-E---GMCRQTFTG-HESDINAICFFPNGNAFATGSDDAT--CRLFDLRA 257 (340)
T ss_dssp EEE-ETTS------CEEEE--ETT-T---CSEEEEECC-CSSCEEEEEECTTSSEEEEEETTSC--EEEEETTT
T ss_pred EEE-eCCC------cEEEE--ECC-C---CeeEEEEcC-CcCCEEEEEEcCCCCEEEEEcCCCc--EEEEECCC
Confidence 433 3332 23444 443 1 111212222 234566676664 345555566664 55566653
No 324
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.08 E-value=0.0009 Score=69.87 Aligned_cols=162 Identities=8% Similarity=0.069 Sum_probs=99.7
Q ss_pred EeeceeeCC--CCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc---cceeeeEEEecCCCEEEEEEecCCCCcceeEE
Q 004839 125 YEELSEVSP--DHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 199 (728)
Q Consensus 125 ~~~~~~~SP--DG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~ 199 (728)
.+..+.|+| +|++|+-.. .+|. |+++|+.+++...... ...+..++|+|||+.|+.... ...|..
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s-~dg~----i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~-----dg~i~i 196 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWAD-NRGT----IGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP-----DGILDV 196 (343)
T ss_dssp CEEEEECCC---CCEEEEEE-TTCC----EEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT-----TSCEEE
T ss_pred CEEEEEcCCCCCCCEEEEEe-CCCc----EEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC-----CCEEEE
Confidence 467788999 999988764 5554 9999999998754321 235778999999987765422 336888
Q ss_pred EECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeee---cCCc---eEEEEeec
Q 004839 200 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWE---CEGL---AHCIVEHH 273 (728)
Q Consensus 200 ~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~---~~~~---~~~~~~~d 273 (728)
+|+.++......+..........+.|+|||++|+..+.. .|.+.|+.+.. ....+.. .... ....++++
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~----~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ----TVVCFDLRKDV-GTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS----BEEEEETTSST-TCBSSCCCBC-----CCEEEEECTT
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC----eEEEEEcCCCC-cceeecccccccccccceEEEECCC
Confidence 899877532123333122345678999999998876632 68889997742 1111111 1111 12456778
Q ss_pred CCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeE
Q 004839 274 EGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWES 311 (728)
Q Consensus 274 g~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 311 (728)
|..|+..+..++ ..+|+.++.. ...|..
T Consensus 272 g~~l~~~s~~d~------~i~v~~~~~~----~~~~~~ 299 (343)
T 3lrv_A 272 GKNMIAYSNESN------SLTIYKFDKK----TKNWTK 299 (343)
T ss_dssp SSEEEEEETTTT------EEEEEEECTT----TCSEEE
T ss_pred CCEEEEecCCCC------cEEEEEEccc----ccceEe
Confidence 887776544232 3566666433 345654
No 325
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=98.07 E-value=1.1e-05 Score=86.96 Aligned_cols=114 Identities=14% Similarity=0.110 Sum_probs=66.5
Q ss_pred CccEEEEEcCCCCCCc------CcccH----HHHHHHHHCCeEEEEEcCCCCCCCCCcccc------ccccCCCC-----
Q 004839 495 QNPGLLHGHGAYGELL------DKRWR----SELKSLLDRGWVVAFADVRGGGGGGKKWHH------DGRRTKKL----- 553 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~------~~~~~----~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~------~~~~~~~~----- 553 (728)
..|.||++||..+... ...|. .....|.++||.|+.+|+||+|.....-.+ .+.+..+.
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~ 130 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEK 130 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccccc
Confidence 3466889999765321 13343 467888899999999999998853100000 00000000
Q ss_pred CcHHHHHHHHHHHHHcCCCC-CCcEEEEEeCccHHHHHHHHHh--------------------------CCCceeEEEEe
Q 004839 554 NSIKDFISCARFLIEKEIVK-EHKLAGWGYSAGGLLVAAAINC--------------------------CPDLFRAVVLE 606 (728)
Q Consensus 554 ~~~~D~~~~~~~l~~~~~~d-~~ri~i~G~S~GG~~~~~~~~~--------------------------~p~~f~a~v~~ 606 (728)
..++++.+.+..++++ .. ..++.++||||||.++..++.. +|++++.+|+.
T Consensus 131 ~~~~~~a~dl~~ll~~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i 208 (431)
T 2hih_A 131 YGHERYGKTYEGVLKD--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTI 208 (431)
T ss_dssp HTCCSEEEEECCSCTT--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHH--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEE
Confidence 0000000000001110 12 2789999999999999998765 68999999998
Q ss_pred CCcc
Q 004839 607 VPFL 610 (728)
Q Consensus 607 ~p~~ 610 (728)
++..
T Consensus 209 ~tP~ 212 (431)
T 2hih_A 209 ATPH 212 (431)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 8753
No 326
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.07 E-value=0.00076 Score=70.61 Aligned_cols=194 Identities=13% Similarity=0.092 Sum_probs=108.9
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceecc----C-ccceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK----P-QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~----~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
+..++|||||++||-.. .+|. |+|+|+++++.... . ....+..++|+|||+.|+-...+. .+.+.
T Consensus 19 v~~l~~sp~g~~las~~-~D~~----i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw 88 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCG-GDRR----IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-----TTCIW 88 (345)
T ss_dssp EEEEEECTTSSCEEEEE-TTSC----EEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----CEEEE
T ss_pred EEEEEECCCCCEEEEEc-CCCe----EEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----cEEEE
Confidence 55678999999998774 4453 89999988753321 1 134678899999999887664332 35555
Q ss_pred ECCCCC-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEE---eeecCCceE-EEEeecCC
Q 004839 201 IIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTL---IWECEGLAH-CIVEHHEG 275 (728)
Q Consensus 201 ~l~t~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~---l~~~~~~~~-~~~~~dg~ 275 (728)
++.++. .....+.... .....+.|+|||++|+..+.+. .|++.|+.++. .... +......+. ..+++++.
T Consensus 89 ~~~~~~~~~~~~~~~h~-~~v~~v~~sp~~~~l~s~s~D~---~v~iwd~~~~~-~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 89 KKNQDDFECVTTLEGHE-NEVKSVAWAPSGNLLATCSRDK---SVWVWEVDEED-EYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EECCC-EEEEEEECCCS-SCEEEEEECTTSSEEEEEETTS---CEEEEEECTTS-CEEEEEEECCCCSCEEEEEECSSSS
T ss_pred EccCCCeEEEEEccCCC-CCceEEEEeCCCCEEEEEECCC---eEEEEECCCCC-CeEEEEEecCcCCCeEEEEECCCCC
Confidence 555443 1122222222 2345689999999887665543 46777776532 2222 222222222 34557776
Q ss_pred EEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEe-ecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEe
Q 004839 276 FLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVF-IDDQGLVVEDVDFCK-THMALILREGRTYRLCSVS 347 (728)
Q Consensus 276 ~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li-~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~ 347 (728)
.|+..+..+ ..+|+.... ..+..+. .......+..+.+.. +.+++....++.-+++...
T Consensus 164 ~l~s~s~d~-------~i~~w~~~~------~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 164 LLASASYDD-------TVKLYREEE------DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp CEEEEETTS-------CEEEEEEET------TEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEEEeCCC-------cEEEEEecC------CCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 555544322 245655432 2232111 122234566777664 4456666777766666543
No 327
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.07 E-value=0.0035 Score=67.40 Aligned_cols=255 Identities=11% Similarity=0.036 Sum_probs=132.9
Q ss_pred EEeecccccccCCceEEeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc----cceeeeEEEecCCCEEE
Q 004839 109 KLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ----AVRVSNIAWAKDGQALI 184 (728)
Q Consensus 109 ~lld~n~~~~~~~~~~~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~----~~~~~~~~WspDg~~l~ 184 (728)
-+||...+... | .+.-+.||+++ .||...+ + .|+|+|+++|+...... ...+..++|+|||+.|+
T Consensus 95 ~~l~ap~~~~d---~-y~~~l~wS~~n-~lAvgld--~----tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~la 163 (420)
T 4gga_A 95 RILDAPEIRND---Y-YLNLVDWSSGN-VLAVALD--N----SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA 163 (420)
T ss_dssp EEEECTTCCCC---T-TCBCEEECTTS-EEEEEET--T----EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEE
T ss_pred eEEECCCCccc---c-cceeEEECCCC-EEEEEeC--C----EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEE
Confidence 35777666542 2 36678899875 7888753 3 49999999998665322 23578999999999887
Q ss_pred EEEecCCCCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC
Q 004839 185 YVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG 264 (728)
Q Consensus 185 y~~~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~ 264 (728)
....+ ..|.+.++.+++. ...+...... .. .++.|++.|+..+.. ..+++.|..........+.....
T Consensus 164 sgs~D-----g~v~iWd~~~~~~-~~~~~~h~~~-v~--~~s~~~~~l~sgs~d---~~i~~~d~~~~~~~~~~~~~h~~ 231 (420)
T 4gga_A 164 VGTSS-----AEVQLWDVQQQKR-LRNMTSHSAR-VG--SLSWNSYILSSGSRS---GHIHHHDVRVAEHHVATLSGHSQ 231 (420)
T ss_dssp EEETT-----SCEEEEETTTTEE-EEEECCCSSC-EE--EEEEETTEEEEEETT---SEEEEEETTSSSCEEEEEECCSS
T ss_pred EEECC-----CeEEEEEcCCCcE-EEEEeCCCCc-eE--EEeeCCCEEEEEeCC---CceeEeeecccceeeEEeccccc
Confidence 65433 3577888877642 1222222222 22 355677776544432 35677777653322333333222
Q ss_pred ce-EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCee
Q 004839 265 LA-HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTY 341 (728)
Q Consensus 265 ~~-~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~ 341 (728)
.. ...+.+++..++...+.+ ..+|+..... .......... ......+..+.+. +..++++.......
T Consensus 232 ~~~~~~~~~~g~~l~s~~~D~-------~v~i~~~~~~-~~~~~~~~~~--~~~~~~V~~~~~~p~~~~~la~~~gs~D~ 301 (420)
T 4gga_A 232 EVCGLRWAPDGRHLASGGNDN-------LVNVWPSAPG-EGGWVPLQTF--TQHQGAVKAVAWCPWQSNVLATGGGTSDR 301 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTS-------CEEEEESSCC-SSCSCCSEEE--CCCSSCEEEEEECTTCTTEEEEEECTTTC
T ss_pred ceeeeeecCCCCeeeeeeccc-------cceEEeeccc-cccceeeeee--cccCCceeeeeeCCCcccEEEEEeecCCC
Confidence 22 234456777666554432 1344443221 1000111111 1222345555544 34455444322234
Q ss_pred EEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeE
Q 004839 342 RLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKW 412 (728)
Q Consensus 342 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~ 412 (728)
.|.++|+.++. .. ..+.....+.++. +..+++.++....+.. ..++.+|+.+++.
T Consensus 302 ~I~iwd~~t~~-----~~-----~~~~~~~~v~~~~----~~~~~~~lv~~sg~~d--~~I~iwd~~~~~~ 356 (420)
T 4gga_A 302 HIRIWNVCSGA-----CL-----SAVDAHSQVCSIL----WSPHYKELISGHGFAQ--NQLVIWKYPTMAK 356 (420)
T ss_dssp EEEEEETTTTE-----EE-----EEEECSSCEEEEE----EETTTTEEEEEECTTT--CCEEEEETTTCCE
T ss_pred EEEEEeCCccc-----cc-----eeeccccceeeee----ecCCCCeEEEEEecCC--CEEEEEECCCCcE
Confidence 57777876542 01 1222233333322 2345666655443322 4688888887764
No 328
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.06 E-value=0.00053 Score=73.48 Aligned_cols=196 Identities=12% Similarity=0.035 Sum_probs=112.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++|+... .+| .|+++|+.+++...... ...+..++|+||++.|+....+ ..|...|+
T Consensus 141 ~v~~~~~~~~~~~l~s~s-~d~----~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~ 210 (420)
T 3vl1_A 141 EITKLKFFPSGEALISSS-QDM----QLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD-----GTIRLWEC 210 (420)
T ss_dssp CEEEEEECTTSSEEEEEE-TTS----EEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEET
T ss_pred ccEEEEECCCCCEEEEEe-CCC----eEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC-----CcEEEeEC
Confidence 577889999999888764 444 49999999987554322 4467889999999988765432 25777788
Q ss_pred CCCCceeEEeeecC---c--------------------ceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEe
Q 004839 203 GSTDEDALLLEESN---E--------------------NVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLI 259 (728)
Q Consensus 203 ~t~~~~~lv~~~~~---~--------------------~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l 259 (728)
.+++. ...+.... . .....+.|+|||++|+....+. .|.++|+.++. ....+
T Consensus 211 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~i~d~~~~~-~~~~~ 285 (420)
T 3vl1_A 211 GTGTT-IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG---VITVHNVFSKE-QTIQL 285 (420)
T ss_dssp TTTEE-EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS---CEEEEETTTCC-EEEEE
T ss_pred CCCce-eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC---eEEEEECCCCc-eeEEc
Confidence 76532 11221100 0 0011245789999987665533 48888987732 22333
Q ss_pred eecC-Cce-EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEec
Q 004839 260 WECE-GLA-HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILRE 337 (728)
Q Consensus 260 ~~~~-~~~-~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~ 337 (728)
.... ..+ ...+++++..+++....++ .|...++. .. ......+.. .....+..+...++.+++....
T Consensus 286 ~~~~~~~v~~~~~~~~~~~~l~~g~~dg--------~i~vwd~~-~~-~~~~~~~~~-~~~~~v~~~~~~~~~~l~s~~~ 354 (420)
T 3vl1_A 286 PSKFTCSCNSLTVDGNNANYIYAGYENG--------MLAQWDLR-SP-ECPVGEFLI-NEGTPINNVYFAAGALFVSSGF 354 (420)
T ss_dssp CCTTSSCEEEEEECSSCTTEEEEEETTS--------EEEEEETT-CT-TSCSEEEEE-STTSCEEEEEEETTEEEEEETT
T ss_pred ccccCCCceeEEEeCCCCCEEEEEeCCC--------eEEEEEcC-CC-cCchhhhhc-cCCCCceEEEeCCCCEEEEecC
Confidence 2222 222 2345677773444444332 34455554 21 112333333 2344566666667777777776
Q ss_pred CCeeEEEEE
Q 004839 338 GRTYRLCSV 346 (728)
Q Consensus 338 ~g~~~l~~~ 346 (728)
+|.-+++.+
T Consensus 355 d~~v~iw~~ 363 (420)
T 3vl1_A 355 DTSIKLDII 363 (420)
T ss_dssp TEEEEEEEE
T ss_pred CccEEEEec
Confidence 765444443
No 329
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.03 E-value=0.0058 Score=63.81 Aligned_cols=199 Identities=11% Similarity=-0.001 Sum_probs=110.4
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCC--ceeccC-c-cceeeeEEEecC--CCEEEEEEecCCCCcceeE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSG--ALCSKP-Q-AVRVSNIAWAKD--GQALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg--~~~~~~-~-~~~~~~~~WspD--g~~l~y~~~~~~~~~~~v~ 198 (728)
.+..++|||||++||... .+|. |+|+|+.++ +..... . ...+..++|+++ ++.|+-...+ ..|.
T Consensus 13 ~v~~~~~s~~~~~l~~~~-~dg~----i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~ 82 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCS-SDKT----IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVL 82 (379)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSC----EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SCEE
T ss_pred cEEEEEEcCCCCEEEEEE-CCCc----EEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-----CEEE
Confidence 577788999999998874 4554 888898744 332221 1 346788999987 7766655332 3577
Q ss_pred EEECCCCC-ceeEEeeecCcceEEEEEEcCC--CCEEEEEEcCCCceEEEEEeCCCCCCCe-EEeeecCCceE-EEEee-
Q 004839 199 CSIIGSTD-EDALLLEESNENVYVNIRHTKD--FHFVCVHTFSTTSSKVFLINAADPFSGL-TLIWECEGLAH-CIVEH- 272 (728)
Q Consensus 199 ~~~l~t~~-~~~lv~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~l~~~dl~~~~~~~-~~l~~~~~~~~-~~~~~- 272 (728)
..++.++. .....+... ......+.|+|+ +++|+..+.+ ..|.++|+.+..... ..+......+. ..+.+
T Consensus 83 iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSD---GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp EEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT---SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred EEEcCCCceeEeeeecCC-CcceEEEEeCCCCCCCEEEEecCC---CcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 77776653 122222222 223456899999 8888776653 368888887642222 22222222222 23444
Q ss_pred ------------cCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEe-ecCCCceEEEEEeeC----CEEEEEE
Q 004839 273 ------------HEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVF-IDDQGLVVEDVDFCK----THMALIL 335 (728)
Q Consensus 273 ------------dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li-~~~~~~~i~~~~~~~----~~lv~~~ 335 (728)
++..|+..+. ++ ..+|+.+... ...+..+. .......+..+.+.. +.+++..
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~-dg------~i~i~d~~~~----~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRKFVTGGA-DN------LVKIWKYNSD----AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp C----------CTTCEEEEEET-TS------CEEEEEEETT----TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred cccccccccCCCCCCEEEEEeC-CC------eEEEEEecCC----CcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 4555554443 32 2445544322 12222111 112234566777664 4677777
Q ss_pred ecCCeeEEEEEecCC
Q 004839 336 REGRTYRLCSVSLPL 350 (728)
Q Consensus 336 ~~~g~~~l~~~~l~~ 350 (728)
..+|.-+ ++++..
T Consensus 228 ~~dg~i~--iwd~~~ 240 (379)
T 3jrp_A 228 SQDRTCI--IWTQDN 240 (379)
T ss_dssp ETTSCEE--EEEESS
T ss_pred eCCCEEE--EEeCCC
Confidence 7777544 455444
No 330
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.02 E-value=0.00053 Score=70.47 Aligned_cols=159 Identities=9% Similarity=-0.022 Sum_probs=89.4
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 204 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t 204 (728)
...+.|+|||+.|.|+ +..++ .|+.++. +|+...... ......+.|++||+ |+.... ....|++++..
T Consensus 47 ~egp~~~~~g~~l~~~-d~~~~---~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~-l~v~~~----~~~~v~~~~~~- 115 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWS-DLVGR---RVLGWRE-DGTVDVLLDATAFTNGNAVDAQQR-LVHCEH----GRRAITRSDAD- 115 (305)
T ss_dssp EEEEEEEGGGTEEEEE-ETTTT---EEEEEET-TSCEEEEEESCSCEEEEEECTTSC-EEEEET----TTTEEEEECTT-
T ss_pred ccCCeEeCCCCEEEEE-ECCCC---EEEEEeC-CCCEEEEeCCCCccceeeECCCCC-EEEEEC----CCCEEEEECCC-
Confidence 3467899999999887 45443 3788898 455333222 33567889999998 544422 22468888875
Q ss_pred CCceeEEeeecCcc--eEEEEEEcCCCCEEEEEEcC---------------CCceEEEEEeCCCCCCCeEEeeecCCceE
Q 004839 205 TDEDALLLEESNEN--VYVNIRHTKDFHFVCVHTFS---------------TTSSKVFLINAADPFSGLTLIWECEGLAH 267 (728)
Q Consensus 205 ~~~~~lv~~~~~~~--~~~~~~~SpDg~~l~~~~~~---------------~~~~~l~~~dl~~~~~~~~~l~~~~~~~~ 267 (728)
+....+........ ...++.+++||+ |+++... .....||++|.++ ++.+.+........
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~--g~~~~~~~~~~p~g 192 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG--SPLQRMADLDHPNG 192 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS--CCCEEEEEESSEEE
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCC--CcEEEEecCCCCcc
Confidence 33222221111111 112467899998 4443210 1136799999876 34444441111123
Q ss_pred EEEeecCCEEEEEEcCCccCCCCCceEEEEeeCC
Q 004839 268 CIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVD 301 (728)
Q Consensus 268 ~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~ 301 (728)
..+++|++.||+........ .+..|++++++
T Consensus 193 l~~spdg~~lyv~~~~~~~~---~~~~i~~~~~~ 223 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGH---GSVEITAFAWR 223 (305)
T ss_dssp EEECTTSSEEEEEECCC------CCCEEEEEEEE
T ss_pred eEEcCCCCEEEEEecCCcCC---CCCEEEEEEec
Confidence 45678888888875532100 02357776654
No 331
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.02 E-value=0.0019 Score=64.76 Aligned_cols=199 Identities=9% Similarity=-0.022 Sum_probs=122.0
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
....+.|+|+++.|.++ +..++ .|++++++++....... ......+++.++++.||++.. ...+|+++++
T Consensus 37 ~~~gi~~d~~~~~ly~~-d~~~~---~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~----~~~~I~~~~~ 108 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWT-DISEP---SIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS----QLDRIEVAKM 108 (267)
T ss_dssp EEEEEEEETTTTEEEEE-ETTTT---EEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET----TTTEEEEEET
T ss_pred cEEEEEEecCCCEEEEE-ECCCC---EEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC----CCCEEEEEEc
Confidence 34567899999988766 55433 48999998775433221 235577899999888888742 2347999998
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC--CceEEEEeecCCEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE--GLAHCIVEHHEGFLYLF 280 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~--~~~~~~~~~dg~~l~~~ 280 (728)
.......++ .. ....-.++.++|++.+|++.........|+++++++ ...+.+.... ......++++++.||+.
T Consensus 109 ~g~~~~~~~-~~-~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg--~~~~~~~~~~~~~P~gia~d~~~~~lyv~ 184 (267)
T 1npe_A 109 DGTQRRVLF-DT-GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG--TNRRILAQDNLGLPNGLTFDAFSSQLCWV 184 (267)
T ss_dssp TSCSCEEEE-CS-SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS--CCCEEEECTTCSCEEEEEEETTTTEEEEE
T ss_pred CCCCEEEEE-EC-CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC--CCcEEEEECCCCCCcEEEEcCCCCEEEEE
Confidence 654332322 21 111234678999888888876543346899999875 2333333221 11233567778888876
Q ss_pred EcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCCC
Q 004839 281 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 281 tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
.... ..|.+++.+ . .....++.. .....++...++.||+....++ +|.+++..++
T Consensus 185 d~~~--------~~I~~~~~~-g---~~~~~~~~~--~~~P~gi~~d~~~lyva~~~~~--~v~~~d~~~g 239 (267)
T 1npe_A 185 DAGT--------HRAECLNPA-Q---PGRRKVLEG--LQYPFAVTSYGKNLYYTDWKTN--SVIAMDLAIS 239 (267)
T ss_dssp ETTT--------TEEEEEETT-E---EEEEEEEEC--CCSEEEEEEETTEEEEEETTTT--EEEEEETTTT
T ss_pred ECCC--------CEEEEEecC-C---CceEEEecC--CCCceEEEEeCCEEEEEECCCC--eEEEEeCCCC
Confidence 5432 357888765 1 112233321 2335577777888888765543 6788887643
No 332
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.02 E-value=0.0015 Score=69.73 Aligned_cols=138 Identities=14% Similarity=0.095 Sum_probs=84.7
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-c-------------------ceeeeEEEecCCCEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-A-------------------VRVSNIAWAKDGQALI 184 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~-------------------~~~~~~~WspDg~~l~ 184 (728)
.+..++|||||++||...+ + .+.|+++.+|+.+.... . ..+..++|+|||+.|+
T Consensus 66 ~V~~v~fspdg~~la~g~~--~----~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGCN--K----TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp CCCEEEECTTSSEEEEECB--S----CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred EEEEEEECCCCCEEEEEcC--C----cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 4667889999999998642 2 37889999887543211 0 0256899999999887
Q ss_pred EEEecCCCCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC
Q 004839 185 YVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG 264 (728)
Q Consensus 185 y~~~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~ 264 (728)
....+ ..|.+.|+.+++. ...+..... ....+.|+|||++|+..+.+ ..|.+.|+.+ ++.........
T Consensus 140 s~~~d-----~~i~iwd~~~~~~-~~~~~~h~~-~v~~~~~~p~~~~l~s~s~d---~~v~iwd~~~--~~~~~~~~~~~ 207 (393)
T 1erj_A 140 TGAED-----RLIRIWDIENRKI-VMILQGHEQ-DIYSLDYFPSGDKLVSGSGD---RTVRIWDLRT--GQCSLTLSIED 207 (393)
T ss_dssp EEETT-----SCEEEEETTTTEE-EEEECCCSS-CEEEEEECTTSSEEEEEETT---SEEEEEETTT--TEEEEEEECSS
T ss_pred EEcCC-----CeEEEEECCCCcE-EEEEccCCC-CEEEEEEcCCCCEEEEecCC---CcEEEEECCC--CeeEEEEEcCC
Confidence 65432 3688888877642 222332222 34568899999998755543 3578889877 33322222222
Q ss_pred ce-EEEEee-cCCEEEEE
Q 004839 265 LA-HCIVEH-HEGFLYLF 280 (728)
Q Consensus 265 ~~-~~~~~~-dg~~l~~~ 280 (728)
.+ ...+++ ++..|+..
T Consensus 208 ~v~~~~~~~~~~~~l~~~ 225 (393)
T 1erj_A 208 GVTTVAVSPGDGKYIAAG 225 (393)
T ss_dssp CEEEEEECSTTCCEEEEE
T ss_pred CcEEEEEECCCCCEEEEE
Confidence 22 234455 45544443
No 333
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=98.00 E-value=1.8e-05 Score=83.94 Aligned_cols=100 Identities=16% Similarity=0.070 Sum_probs=63.7
Q ss_pred cEEEEEcCCCCCCcC-----cccH----HHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHH--
Q 004839 497 PGLLHGHGAYGELLD-----KRWR----SELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARF-- 565 (728)
Q Consensus 497 P~vv~~hGg~~~~~~-----~~~~----~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~-- 565 (728)
|.||++||..+.... ..|. ...+.|.++||.|+.+|+||+|... . ...++...++.
T Consensus 7 ~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~---~----------~a~~l~~~i~~~~ 73 (387)
T 2dsn_A 7 APIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNW---D----------RACEAYAQLVGGT 73 (387)
T ss_dssp CCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHH---H----------HHHHHHHHHHCEE
T ss_pred CcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCcc---c----------cHHHHHHHHHhhh
Confidence 458889997654311 1243 3348888999999999999987420 0 01122222210
Q ss_pred ------HHHc---------------CCCCCCcEEEEEeCccHHHHHHHHHh-------------------CC------Cc
Q 004839 566 ------LIEK---------------EIVKEHKLAGWGYSAGGLLVAAAINC-------------------CP------DL 599 (728)
Q Consensus 566 ------l~~~---------------~~~d~~ri~i~G~S~GG~~~~~~~~~-------------------~p------~~ 599 (728)
+.+. .....+++.++||||||.++..++.+ +| ++
T Consensus 74 vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~ 153 (387)
T 2dsn_A 74 VDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHF 153 (387)
T ss_dssp EECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCC
T ss_pred hhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccc
Confidence 1100 01234799999999999999998862 35 78
Q ss_pred eeEEEEeCCc
Q 004839 600 FRAVVLEVPF 609 (728)
Q Consensus 600 f~a~v~~~p~ 609 (728)
++.+|+.++.
T Consensus 154 V~sLV~i~tP 163 (387)
T 2dsn_A 154 VLSVTTIATP 163 (387)
T ss_dssp EEEEEEESCC
T ss_pred eeEEEEECCC
Confidence 8999988764
No 334
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.97 E-value=0.0012 Score=70.62 Aligned_cols=111 Identities=11% Similarity=0.075 Sum_probs=77.2
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
.....+||||++||... .+|. |.++|+++++...... ...+..++|+||++.|+.... ...|.++++.
T Consensus 100 ~~~~~~~~~~~~l~~~~-~dg~----i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-----d~~i~iwd~~ 169 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGT-TEGD----IKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ-----DMQLKIWSVK 169 (420)
T ss_dssp EEEEEECSSSCEEEEEE-TTSC----EEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET-----TSEEEEEETT
T ss_pred eEEEEEecCCCEEEEEE-CCCC----EEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC-----CCeEEEEeCC
Confidence 33446899999999874 4554 8999999988765432 457889999999997765532 2368888998
Q ss_pred CCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 204 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
+++... .+.... .....+.|+|||++|+..+.+. .|.+.|+.+
T Consensus 170 ~~~~~~-~~~~h~-~~v~~~~~~~~~~~l~s~~~d~---~v~iwd~~~ 212 (420)
T 3vl1_A 170 DGSNPR-TLIGHR-ATVTDIAIIDRGRNVLSASLDG---TIRLWECGT 212 (420)
T ss_dssp TCCCCE-EEECCS-SCEEEEEEETTTTEEEEEETTS---CEEEEETTT
T ss_pred CCcCce-EEcCCC-CcEEEEEEcCCCCEEEEEcCCC---cEEEeECCC
Confidence 765222 222222 2345688999999987655433 477788876
No 335
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.95 E-value=0.0025 Score=65.15 Aligned_cols=113 Identities=11% Similarity=0.144 Sum_probs=77.7
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|+|||++|+... .+|. |+++|+.+++...... ...+..+.|+||++.|+....+ ..|..+|+
T Consensus 109 ~v~~~~~~~~~~~l~s~~-~d~~----i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~ 178 (312)
T 4ery_A 109 YVFCCNFNPQSNLIVSGS-FDES----VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD-----GLCRIWDT 178 (312)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSC----EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred CEEEEEEcCCCCEEEEEe-CCCc----EEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEC
Confidence 356678999999988764 4554 9999999987654322 3467889999999977655432 36888898
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
.+++....+.. ........+.++|||++|+..+.+ ..|.+.|+.+
T Consensus 179 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d---~~i~iwd~~~ 223 (312)
T 4ery_A 179 ASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLD---NTLKLWDYSK 223 (312)
T ss_dssp TTCCEEEEECC-SSCCCEEEEEECTTSSEEEEEETT---TEEEEEETTT
T ss_pred CCCceeeEEec-cCCCceEEEEECCCCCEEEEEcCC---CeEEEEECCC
Confidence 77642222222 222223457899999998876553 3688899877
No 336
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.92 E-value=0.001 Score=73.49 Aligned_cols=189 Identities=11% Similarity=0.070 Sum_probs=103.4
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-----cceeeeEEEecCCCEEEEEEecCCCCcceeEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-----AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 199 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-----~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~ 199 (728)
.+...+|||||++||-.. .+|. +.|+|.++ ....... ...+..++|||||+.|+-... ...|.+
T Consensus 87 ~V~~vawSPdG~~LAs~s-~dg~----V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~-----DGtVkI 155 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLS-NNGN----VSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNE-----DGELQF 155 (588)
T ss_dssp CEEEEEECSSSSCEEEEE-TTSC----EEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEET-----TSEEEE
T ss_pred cEEEEEECCCCCEEEEEe-CCCc----EEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcC-----CCEEEE
Confidence 477889999999999875 5554 88899654 1111111 114778999999998877643 236777
Q ss_pred EECCCCCc-e-----eEEee---ecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCC--eEEeeecC-Cce-
Q 004839 200 SIIGSTDE-D-----ALLLE---ESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSG--LTLIWECE-GLA- 266 (728)
Q Consensus 200 ~~l~t~~~-~-----~lv~~---~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~--~~~l~~~~-~~~- 266 (728)
+++.++.. . ...+. .........++||||| |+..+. .+.+++.|+++.... .+.+.+.. ..+
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~---D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~ 230 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS---NNSVFSMTVSASSHQPVSRMIQNASRRKIT 230 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET---TCCEEEECCCSSSSCCCEEEEECCCSSCCC
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeC---CCeEEEEECCCCccccceeeecccccCcEE
Confidence 88876531 1 11111 1122345678999999 444333 345788888764311 12342222 222
Q ss_pred EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEe--eCC-EEEEEEecCCeeEE
Q 004839 267 HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDF--CKT-HMALILREGRTYRL 343 (728)
Q Consensus 267 ~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~--~~~-~lv~~~~~~g~~~l 343 (728)
...++ |+.++... ++ ..+|+. +. ..... ....+....+.++.+ .++ ..+++..++|. +|
T Consensus 231 svaFs--g~~LASa~--~~------tIkLWd--~~----~~~~~-~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-kl 292 (588)
T 2j04_A 231 DLKIV--DYKVVLTC--PG------YVHKID--LK----NYSIS-SLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KV 292 (588)
T ss_dssp CEEEE--TTEEEEEC--SS------EEEEEE--TT----TTEEE-EEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EE
T ss_pred EEEEE--CCEEEEEe--CC------eEEEEE--CC----CCeEE-EEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EE
Confidence 22333 56555543 22 244444 33 11111 222123344556666 554 56666666777 77
Q ss_pred EEEe
Q 004839 344 CSVS 347 (728)
Q Consensus 344 ~~~~ 347 (728)
+.++
T Consensus 293 w~~d 296 (588)
T 2j04_A 293 LLED 296 (588)
T ss_dssp EESS
T ss_pred Eeec
Confidence 6653
No 337
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.92 E-value=0.0026 Score=67.10 Aligned_cols=76 Identities=12% Similarity=0.013 Sum_probs=51.9
Q ss_pred ceeeCCCCCEEEEEEE-----cCCCcEEEEEEEECCCCceeccCc-c-------ceeeeEEEecCCCEEEEEEecCCCCc
Q 004839 128 LSEVSPDHKFLAYTMY-----DKDNDYFTLSVRNLNSGALCSKPQ-A-------VRVSNIAWAKDGQALIYVVTDQNKRP 194 (728)
Q Consensus 128 ~~~~SPDG~~lA~~~~-----~~g~e~~~l~v~dl~tg~~~~~~~-~-------~~~~~~~WspDg~~l~y~~~~~~~~~ 194 (728)
.+.+||||++|+.+.. ..|.....|.++|+++++.+.... . .....++++|||++||..... ..
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~---~~ 130 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS---PA 130 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES---SS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC---CC
Confidence 6789999998866532 134445679999999987654321 1 134578999999988776432 12
Q ss_pred ceeEEEECCCCC
Q 004839 195 YQIYCSIIGSTD 206 (728)
Q Consensus 195 ~~v~~~~l~t~~ 206 (728)
..|..+|+.+.+
T Consensus 131 ~~v~v~d~~~~~ 142 (361)
T 2oiz_A 131 TSIGIVDVAKGD 142 (361)
T ss_dssp EEEEEEETTTTE
T ss_pred CeEEEEECCCCc
Confidence 468888887764
No 338
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.92 E-value=0.018 Score=58.45 Aligned_cols=147 Identities=13% Similarity=0.101 Sum_probs=81.8
Q ss_pred EeecccccccCCceEEeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc----cceeeeEEEecCCCEEEE
Q 004839 110 LLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ----AVRVSNIAWAKDGQALIY 185 (728)
Q Consensus 110 lld~n~~~~~~~~~~~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~----~~~~~~~~WspDg~~l~y 185 (728)
+||...+.. + | .+..+.|||++ .||... ++ .|+|+|+++|+.+.... ...+..++|+|||+.|+-
T Consensus 16 vldap~~~~--d-~-y~~~l~WS~~~-~lAvg~--D~----tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s 84 (318)
T 4ggc_A 16 ILDAPEIRN--D-Y-YLNLVDWSSGN-VLAVAL--DN----SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV 84 (318)
T ss_dssp EEECTTCCC--C-T-TCBCEEECTTS-EEEEEE--TT----EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE
T ss_pred EeeCCCCcc--c-c-cceEEEECCCC-EEEEEe--CC----EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE
Confidence 467655543 2 2 24557899997 788765 23 49999999998665322 235788999999998765
Q ss_pred EEecCCCCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCc
Q 004839 186 VVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL 265 (728)
Q Consensus 186 ~~~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~ 265 (728)
...+ ..|...++.+++. ...+...... . ..++++++.|+..+.. ..+...+..........+......
T Consensus 85 gs~D-----g~v~iw~~~~~~~-~~~~~~h~~~-~--~~~~~~~~~l~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 152 (318)
T 4ggc_A 85 GTSS-----AEVQLWDVQQQKR-LRNMTSHSAR-V--GSLSWNSYILSSGSRS---GHIHHHDVRVAEHHVATLSGHSQE 152 (318)
T ss_dssp EETT-----SEEEEEETTTTEE-EEEEECCSSC-E--EEEEEETTEEEEEETT---SEEEEEETTSSSCEEEEEECCSSC
T ss_pred EECC-----CcEEEeecCCcee-EEEecCccce-E--EEeecCCCEEEEEecC---CceEeeecCCCceeEEEEcCccCc
Confidence 5332 3677888877642 1122222222 1 2456677766544432 234555554432222233322222
Q ss_pred eE-EEEeecCCEEEE
Q 004839 266 AH-CIVEHHEGFLYL 279 (728)
Q Consensus 266 ~~-~~~~~dg~~l~~ 279 (728)
.. ..+.+++..|+.
T Consensus 153 ~~~~~~~~~~~~l~s 167 (318)
T 4ggc_A 153 VCGLRWAPDGRHLAS 167 (318)
T ss_dssp EEEEEECTTSSEEEE
T ss_pred eEEEEEcCCCCEEEE
Confidence 22 233455555543
No 339
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.90 E-value=0.0017 Score=68.05 Aligned_cols=144 Identities=10% Similarity=0.030 Sum_probs=85.3
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCc--eec-cCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA--LCS-KPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~--~~~-~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.+..+.|||||++||... .+| .|+++|+++++ ... ... ...+..++|+||++.|+....+ ..|.++
T Consensus 10 ~i~~~~~s~~~~~l~~~~-~d~----~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vw 79 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICP-NNH----EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVW 79 (372)
T ss_dssp CCCEEEECTTSSEEEEEC-SSS----EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEE
T ss_pred CeEEEEECCCCCEEEEEe-CCC----EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEE
Confidence 466788999999998873 333 49999999986 322 211 4467889999999988766432 357777
Q ss_pred ECCCCC-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCC--eEEeeec-CCce-EEEEeecCC
Q 004839 201 IIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSG--LTLIWEC-EGLA-HCIVEHHEG 275 (728)
Q Consensus 201 ~l~t~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~--~~~l~~~-~~~~-~~~~~~dg~ 275 (728)
++.+++ ......... ......+.|+|||++|+....+. .+++.|+...... ...+... ...+ ...+++++.
T Consensus 80 d~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~---~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 155 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRI-NRAARCVRWAPNEKKFAVGSGSR---VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV 155 (372)
T ss_dssp EEETTEEEEEEECCCC-SSCEEEEEECTTSSEEEEEETTS---SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS
T ss_pred ECCCCeeeeeEEeecC-CCceeEEEECCCCCEEEEEeCCC---EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC
Confidence 776553 112221222 22345688999999987766532 3556565542211 1222222 1222 234556777
Q ss_pred EEEEEEc
Q 004839 276 FLYLFTD 282 (728)
Q Consensus 276 ~l~~~tn 282 (728)
.|+..+.
T Consensus 156 ~l~~~~~ 162 (372)
T 1k8k_C 156 LLAAGSC 162 (372)
T ss_dssp EEEEEET
T ss_pred EEEEEcC
Confidence 6655443
No 340
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.88 E-value=0.0025 Score=66.68 Aligned_cols=113 Identities=9% Similarity=0.046 Sum_probs=73.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceecc---C-ccceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK---P-QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~---~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.+..+.|||||++|+... .+|. |+++|+++++.... . ....+..+.|+||++.|+....+ ..|..+
T Consensus 54 ~v~~~~~~~~~~~l~~~~-~dg~----i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~ 123 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCG-TDRN----AYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISIC 123 (372)
T ss_dssp CEEEEEEETTTTEEEEEE-TTSC----EEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEE
T ss_pred cccEEEEeCCCCEEEEEc-CCCe----EEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEE
Confidence 467788999999998774 4554 89999998864332 1 13467889999999988776432 246666
Q ss_pred ECCCCCce--eEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCC
Q 004839 201 IIGSTDED--ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAA 250 (728)
Q Consensus 201 ~l~t~~~~--~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~ 250 (728)
++.+.... ..............+.|+||+++|+..+.+ ..|+++|+.
T Consensus 124 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~~~d~~ 172 (372)
T 1k8k_C 124 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD---FKCRIFSAY 172 (372)
T ss_dssp EEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT---SCEEEEECC
T ss_pred EecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC---CCEEEEEcc
Confidence 66554321 111112222334678999999988766543 357777753
No 341
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.88 E-value=0.006 Score=64.80 Aligned_cols=111 Identities=16% Similarity=0.182 Sum_probs=69.3
Q ss_pred EeeceeeCCCCC-EEEEEEEcCCCcEEEEEEEEC----CCCce------ec-cCc-----------cceeeeEEEecCCC
Q 004839 125 YEELSEVSPDHK-FLAYTMYDKDNDYFTLSVRNL----NSGAL------CS-KPQ-----------AVRVSNIAWAKDGQ 181 (728)
Q Consensus 125 ~~~~~~~SPDG~-~lA~~~~~~g~e~~~l~v~dl----~tg~~------~~-~~~-----------~~~~~~~~WspDg~ 181 (728)
.+..+.|||||+ +||... .+| .|.++|+ .+++. .. ... ...+..++|+||++
T Consensus 47 ~v~~~~~s~~~~~~l~~~~-~dg----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGE-KNS----VARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp CCSEEEECSSCTTEEEEEE-TBT----EEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred ceEEEEECCCCCcEEEEec-CCc----eEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 467789999999 888764 444 4899999 88872 21 111 22578899999999
Q ss_pred EEEEEEecCCCCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 182 ALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 182 ~l~y~~~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
.|+....+ ..|.+++. ++. ....+... ......+.|+||+++|+..+.+ ..|.++|+.+
T Consensus 122 ~l~~~~~d-----g~i~i~~~-~~~-~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~ 180 (425)
T 1r5m_A 122 SIVTGVEN-----GELRLWNK-TGA-LLNVLNFH-RAPIVSVKWNKDGTHIISMDVE---NVTILWNVIS 180 (425)
T ss_dssp EEEEEETT-----SCEEEEET-TSC-EEEEECCC-CSCEEEEEECTTSSEEEEEETT---CCEEEEETTT
T ss_pred EEEEEeCC-----CeEEEEeC-CCC-eeeeccCC-CccEEEEEECCCCCEEEEEecC---CeEEEEECCC
Confidence 88776432 25666773 322 22222222 2234568999999998876653 3578888876
No 342
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.85 E-value=0.003 Score=66.80 Aligned_cols=116 Identities=9% Similarity=-0.034 Sum_probs=73.6
Q ss_pred EeeceeeC----CCCCE-EEEEEEcCCCcEEEEEEEECCC------Cceec-----cC---------ccceeeeEEEecC
Q 004839 125 YEELSEVS----PDHKF-LAYTMYDKDNDYFTLSVRNLNS------GALCS-----KP---------QAVRVSNIAWAKD 179 (728)
Q Consensus 125 ~~~~~~~S----PDG~~-lA~~~~~~g~e~~~l~v~dl~t------g~~~~-----~~---------~~~~~~~~~WspD 179 (728)
.+..+.|+ |||++ |+.. ..+|. |+++|+.+ ++.+. .. ....+..++|+||
T Consensus 123 ~v~~~~~~~~~~~~~~~~l~~~-~~dg~----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 197 (397)
T 1sq9_A 123 SFWALKWGASNDRLLSHRLVAT-DVKGT----TYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER 197 (397)
T ss_dssp CEEEEEEECCC----CEEEEEE-ETTSC----EEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT
T ss_pred cEEEEEEeeccCCCCceEEEEE-eCCCc----EEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCC
Confidence 56778899 99999 7665 45554 89999988 55433 11 1335678999999
Q ss_pred CCEEEEEEecCCCCcceeEEEECCCCCceeEEeee---c--CcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCC
Q 004839 180 GQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEE---S--NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 180 g~~l~y~~~~~~~~~~~v~~~~l~t~~~~~lv~~~---~--~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
+ .|+.. . ....|..+++.+.+. ...+.. . .......+.|+||+++|+....+.....|.++|+.++
T Consensus 198 ~-~l~~~-~----~dg~i~i~d~~~~~~-~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 198 G-LIATG-F----NNGTVQISELSTLRP-LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp S-EEEEE-C----TTSEEEEEETTTTEE-EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC
T ss_pred c-eEEEE-e----CCCcEEEEECCCCce-eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 9 55443 2 234788899877532 222222 1 0223457899999999887765433367999999873
No 343
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.84 E-value=0.0017 Score=68.73 Aligned_cols=116 Identities=10% Similarity=0.056 Sum_probs=75.9
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
.+..+.|||||++|+... .+| .|+++|+.+........ ...+..++|+||++.++++... ...|..+|+.
T Consensus 165 ~v~~~~~~~~~~~l~~~~-~d~----~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~----d~~i~iwd~~ 235 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGD-STG----RLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSV----DATVKLWDLR 235 (383)
T ss_dssp CEEEEEEETTTTEEEEEE-TTS----EEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEET----TSEEEEEEGG
T ss_pred CeEEEEECCCCCEEEEEC-CCC----CEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeC----CCEEEEEeCC
Confidence 366788999999998764 444 49999995433322222 4567889999999955555443 2368888887
Q ss_pred CCC-ceeEEeeecCcceEEEEEEcC-CCCEEEEEEcCCCceEEEEEeCCCC
Q 004839 204 STD-EDALLLEESNENVYVNIRHTK-DFHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 204 t~~-~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
+.. ....+...........+.|+| ||++|+..+.+ ..|.++|+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d---~~i~iwd~~~~ 283 (383)
T 3ei3_B 236 NIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQR---NEIRVYSSYDW 283 (383)
T ss_dssp GCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESS---SEEEEEETTBT
T ss_pred CCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCC---CcEEEEECCCC
Confidence 632 112222112223446789999 99998766553 46888998774
No 344
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.84 E-value=0.0041 Score=64.94 Aligned_cols=199 Identities=13% Similarity=0.148 Sum_probs=107.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceecc---Cc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK---PQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~---~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.+..++|||||++||... .++. +.++|+.++..... .. ...+..++|+|||+.|+-...+ ..|...
T Consensus 63 ~v~~~~~sp~g~~l~s~s-~D~~----v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iw 132 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASAS-FDAT----TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVW 132 (345)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSC----EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEE
T ss_pred cEEEEEECCCCCEEEEEE-CCCc----EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEE
Confidence 577889999999998774 4554 88899887753221 11 3467889999999987765433 257777
Q ss_pred ECCCCCceeE--EeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeE---EeeecCCce-EEEEeecC
Q 004839 201 IIGSTDEDAL--LLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLT---LIWECEGLA-HCIVEHHE 274 (728)
Q Consensus 201 ~l~t~~~~~l--v~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~---~l~~~~~~~-~~~~~~dg 274 (728)
++.++..... .+... ......+.|+|||++|+..+.+. .|.+.|+.+ .... .+......+ ...++++|
T Consensus 133 d~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d~---~i~~w~~~~--~~~~~~~~~~~h~~~v~~l~~sp~g 206 (345)
T 3fm0_A 133 EVDEEDEYECVSVLNSH-TQDVKHVVWHPSQELLASASYDD---TVKLYREEE--DDWVCCATLEGHESTVWSLAFDPSG 206 (345)
T ss_dssp EECTTSCEEEEEEECCC-CSCEEEEEECSSSSCEEEEETTS---CEEEEEEET--TEEEEEEEECCCSSCEEEEEECTTS
T ss_pred ECCCCCCeEEEEEecCc-CCCeEEEEECCCCCEEEEEeCCC---cEEEEEecC--CCEEEEEEecCCCCceEEEEECCCC
Confidence 7766532221 22222 22345688999999887665543 355556554 2222 122222222 23456777
Q ss_pred CEEEEEEcCCccCCCCCceEEEEeeCCCCC-------CCCCCeEEee--cCCCceEEEEEeeC-CEEEEEEecCCeeEEE
Q 004839 275 GFLYLFTDAAKEGQEADNHYLLRCPVDASF-------PSRTWESVFI--DDQGLVVEDVDFCK-THMALILREGRTYRLC 344 (728)
Q Consensus 275 ~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~li~--~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~ 344 (728)
..|+..+... ..+|+........ ....|+.+.. ......+..+.+.. +..++....++.-+++
T Consensus 207 ~~l~s~s~D~-------~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw 279 (345)
T 3fm0_A 207 QRLASCSDDR-------TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVF 279 (345)
T ss_dssp SEEEEEETTS-------CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred CEEEEEeCCC-------eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 7666544322 2566664322010 0112332211 11234466666654 3445555556655554
Q ss_pred EE
Q 004839 345 SV 346 (728)
Q Consensus 345 ~~ 346 (728)
..
T Consensus 280 ~~ 281 (345)
T 3fm0_A 280 QE 281 (345)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 345
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.84 E-value=0.002 Score=68.02 Aligned_cols=113 Identities=12% Similarity=-0.044 Sum_probs=70.5
Q ss_pred CCCEEEEEEEcCCCcEE-EEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEec--C---CCCcceeEEEECCCCC-
Q 004839 134 DHKFLAYTMYDKDNDYF-TLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTD--Q---NKRPYQIYCSIIGSTD- 206 (728)
Q Consensus 134 DG~~lA~~~~~~g~e~~-~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~--~---~~~~~~v~~~~l~t~~- 206 (728)
+..+ +|..+.+++.-. ++.|+|+++++.+.....+....+..||||+.||.+... + ..+...|..+|+.+.+
T Consensus 30 ~~~~-~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 30 ISRR-SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp CTTE-EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CCCe-EEEECCccCCccceEEEEECCCCeEEEEEeCCCCCceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 4344 677776554112 799999999987764332222279999999988877532 1 1234579999999886
Q ss_pred ceeEEee-e------cCcceEEEEEEcCCCCEEEEEEcCCCceEEEE--EeCCC
Q 004839 207 EDALLLE-E------SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFL--INAAD 251 (728)
Q Consensus 207 ~~~lv~~-~------~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~--~dl~~ 251 (728)
..++... . .++. ++.+||||++|++.... ..+.+.+ +|+++
T Consensus 109 v~~I~v~~~~~~~~g~~P~---~ia~SpDGk~lyVan~~-~~~~v~V~~iD~~t 158 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVH---IIGNCASSACLLFFLFG-SSAAAGLSVPGASD 158 (368)
T ss_dssp EEEEEETTSCSCCBSCCTT---SEEECTTSSCEEEEECS-SSCEEEEEETTTEE
T ss_pred EEEEECCCccccccCCCcc---eEEEcCCCCEEEEEccC-CCCeEEEEEEchhh
Confidence 3333221 0 1222 36789999999887543 2334556 66654
No 346
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.82 E-value=0.0046 Score=66.59 Aligned_cols=58 Identities=10% Similarity=0.121 Sum_probs=39.2
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCce-----------ec-cCc-c------------ceeeeEEEecC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGAL-----------CS-KPQ-A------------VRVSNIAWAKD 179 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~-----------~~-~~~-~------------~~~~~~~WspD 179 (728)
.+..++|||||++||... .+| .|+|+|+.+++. .. ... . ..+..++|+|+
T Consensus 30 ~V~~v~~s~~g~~la~g~-~dg----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGD-KGG----RVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp SEEEEEECSSSSEEEEEE-TTS----EEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cEEEEEECCCCCEEEEEc-CCC----eEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 477788999999999874 455 389999988762 11 111 1 44778999999
Q ss_pred C--CEEEEEE
Q 004839 180 G--QALIYVV 187 (728)
Q Consensus 180 g--~~l~y~~ 187 (728)
+ ..|+...
T Consensus 105 ~~~~~l~s~s 114 (447)
T 3dw8_B 105 KNAAQFLLST 114 (447)
T ss_dssp CSSSEEEEEE
T ss_pred CCcceEEEeC
Confidence 8 5666554
No 347
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.81 E-value=0.036 Score=57.90 Aligned_cols=195 Identities=9% Similarity=-0.080 Sum_probs=107.0
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++||-.. .+| .|.|+|..+++...... ...+..++|+|||+.|+.... ...+..+++
T Consensus 66 ~V~~~~~s~d~~~l~s~s-~Dg----~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~-----d~~i~v~~~ 135 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSS-QDG----KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGL-----DNKCSVYPL 135 (354)
T ss_dssp CEEEEEECTTSSEEEEEE-TTS----EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEEST-----TSEEEEEEC
T ss_pred eEEEEEECCCCCEEEEEe-CCC----eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeC-----CCCEEEEEE
Confidence 577888999999987664 455 49999999887544322 335678999999998766532 234555555
Q ss_pred CCCC-----ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE-EEEee--cC
Q 004839 203 GSTD-----EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEH--HE 274 (728)
Q Consensus 203 ~t~~-----~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~-~~~~~--dg 274 (728)
.... .....+... ......+.|+|+++.|+..+.+ ..|.+.|+.++. ....+......+. ..+.+ +|
T Consensus 136 ~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~t~s~D---~~v~lwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~g 210 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMH-TNYLSACSFTNSDMQILTASGD---GTCALWDVESGQ-LLQSFHGHGADVLCLDLAPSETG 210 (354)
T ss_dssp CCCTTCCSGGGCEEEEEC-SSCEEEEEECSSSSEEEEEETT---SEEEEEETTTCC-EEEEEECCSSCEEEEEECCCSSC
T ss_pred eccccccccccceeeecc-CCcEEEEEEeCCCCEEEEEeCC---CcEEEEeCCCCe-EEEEEcCCCCCeEEEEEEeCCCC
Confidence 4321 111111212 2234567899999988765543 358888988732 2233332222222 23333 34
Q ss_pred CEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecCC
Q 004839 275 GFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 275 ~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
..|+.. ..++ .|...++. . ......+. .....+..+.+.. +.+++....++. +.++|+..
T Consensus 211 ~~l~sg-s~Dg--------~v~~wd~~-~---~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~--v~lwd~~~ 271 (354)
T 2pbi_B 211 NTFVSG-GCDK--------KAMVWDMR-S---GQCVQAFE-THESDVNSVRYYPSGDAFASGSDDAT--CRLYDLRA 271 (354)
T ss_dssp CEEEEE-ETTS--------CEEEEETT-T---CCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSC--EEEEETTT
T ss_pred CEEEEE-eCCC--------eEEEEECC-C---CcEEEEec-CCCCCeEEEEEeCCCCEEEEEeCCCe--EEEEECCC
Confidence 444433 3332 24444444 1 22222222 2234566777664 345556566664 55566543
No 348
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=97.81 E-value=2.4e-05 Score=81.84 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=71.8
Q ss_pred CccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHH-HHHHHHcCCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISC-ARFLIEKEIVK 573 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d 573 (728)
..|.|+++||+.+.. ..|......| ..+|.|+.+|.+|.+... . ...+++++.+. ++.+.+.. .
T Consensus 100 ~~~~l~~lhg~~~~~--~~~~~l~~~L-~~~~~v~~~d~~g~~~~~-------~---~~~~~~~~a~~~~~~i~~~~--~ 164 (329)
T 3tej_A 100 NGPTLFCFHPASGFA--WQFSVLSRYL-DPQWSIIGIQSPRPNGPM-------Q---TAANLDEVCEAHLATLLEQQ--P 164 (329)
T ss_dssp SSCEEEEECCTTSCC--GGGGGGGGTS-CTTCEEEEECCCTTTSHH-------H---HCSSHHHHHHHHHHHHHHHC--S
T ss_pred CCCcEEEEeCCcccc--hHHHHHHHhc-CCCCeEEEeeCCCCCCCC-------C---CCCCHHHHHHHHHHHHHHhC--C
Confidence 347889999976643 4455555555 568999999999986421 0 11356666554 33333321 2
Q ss_pred CCcEEEEEeCccHHHHHHHHHh---CCCceeEEEEeCCcccc
Q 004839 574 EHKLAGWGYSAGGLLVAAAINC---CPDLFRAVVLEVPFLDA 612 (728)
Q Consensus 574 ~~ri~i~G~S~GG~~~~~~~~~---~p~~f~a~v~~~p~~d~ 612 (728)
.+++.++|||+||.++..++.+ +|++++.+|+..+....
T Consensus 165 ~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~ 206 (329)
T 3tej_A 165 HGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPE 206 (329)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTH
T ss_pred CCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCC
Confidence 2589999999999999999988 99999999988776543
No 349
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.80 E-value=0.006 Score=63.69 Aligned_cols=199 Identities=8% Similarity=0.039 Sum_probs=111.5
Q ss_pred EeeceeeCCC--CCEEEEEEEcCCCcEEEEEEEECCCCcee--cc-C-ccceeeeEEEecC--CCEEEEEEecCCCCcce
Q 004839 125 YEELSEVSPD--HKFLAYTMYDKDNDYFTLSVRNLNSGALC--SK-P-QAVRVSNIAWAKD--GQALIYVVTDQNKRPYQ 196 (728)
Q Consensus 125 ~~~~~~~SPD--G~~lA~~~~~~g~e~~~l~v~dl~tg~~~--~~-~-~~~~~~~~~WspD--g~~l~y~~~~~~~~~~~ 196 (728)
.+..+.|||+ |++|+... .+|. |+++|+.+++.. .. . ....+..++|+|+ ++.|+....+ ..
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~-~dg~----v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~ 126 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCS-YDGK----VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GK 126 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEE-TTSC----EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SE
T ss_pred cEEEEEeCCCCCCCEEEEec-cCCE----EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----Cc
Confidence 4677889988 89887764 5554 999999998622 21 1 1346788999999 8877766432 36
Q ss_pred eEEEECCCCC-ceeEEeeecCcceEEEEEEcC-------------CCCEEEEEEcCCCceEEEEEeCCCCCCCeEEee--
Q 004839 197 IYCSIIGSTD-EDALLLEESNENVYVNIRHTK-------------DFHFVCVHTFSTTSSKVFLINAADPFSGLTLIW-- 260 (728)
Q Consensus 197 v~~~~l~t~~-~~~lv~~~~~~~~~~~~~~Sp-------------Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~-- 260 (728)
|..+++.+.. ......... ......+.|+| |+++|+..+.+. .|+++|+.++......+.
T Consensus 127 i~v~d~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~ 202 (379)
T 3jrp_A 127 VSVVEFKENGTTSPIIIDAH-AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN---LVKIWKYNSDAQTYVLESTL 202 (379)
T ss_dssp EEEEECCTTSCCCEEEEECC-TTCEEEEEECCCC----------CTTCEEEEEETTS---CEEEEEEETTTTEEEEEEEE
T ss_pred EEEEecCCCCceeeEEecCC-CCceEEEEEcCccccccccccCCCCCCEEEEEeCCC---eEEEEEecCCCcceeeEEEE
Confidence 8888887764 222222222 22345678999 688877666543 477777765332222221
Q ss_pred e-cCCce-EEEEeecC--CEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeE-Eeec-CCCceEEEEEeeC-CEEEE
Q 004839 261 E-CEGLA-HCIVEHHE--GFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWES-VFID-DQGLVVEDVDFCK-THMAL 333 (728)
Q Consensus 261 ~-~~~~~-~~~~~~dg--~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-li~~-~~~~~i~~~~~~~-~~lv~ 333 (728)
. ....+ ...+++++ +.+++....++ ..+|+.+... ...+.. +... .....+..+.+.. +.+++
T Consensus 203 ~~h~~~v~~~~~sp~~~~~~~l~s~~~dg------~i~iwd~~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 272 (379)
T 3jrp_A 203 EGHSDWVRDVAWSPTVLLRSYLASVSQDR------TCIIWTQDNE----QGPWKKTLLKEEKFPDVLWRASWSLSGNVLA 272 (379)
T ss_dssp CCCSSCEEEEEECCCCSSSEEEEEEETTS------CEEEEEESST----TSCCEEEESSSSCCSSCEEEEEECSSSCCEE
T ss_pred ecccCcEeEEEECCCCCCCCeEEEEeCCC------EEEEEeCCCC----CccceeeeeccccCCCcEEEEEEcCCCCEEE
Confidence 1 12222 23456773 44444444443 2455554322 122222 2211 1234566666654 34455
Q ss_pred EEecCCeeEEEEEe
Q 004839 334 ILREGRTYRLCSVS 347 (728)
Q Consensus 334 ~~~~~g~~~l~~~~ 347 (728)
+...+|.-+++.++
T Consensus 273 ~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 273 LSGGDNKVTLWKEN 286 (379)
T ss_dssp EEESSSSEEEEEEE
T ss_pred EecCCCcEEEEeCC
Confidence 55567765555554
No 350
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.79 E-value=0.0016 Score=76.58 Aligned_cols=195 Identities=9% Similarity=-0.052 Sum_probs=112.3
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++||... .+| .|+|+|+.+|+...... ...+..++|+||++.|+.... ...|..+++
T Consensus 57 ~v~~~~~s~~~~~l~~~~-~dg----~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~vw~~ 126 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGS-DDF----RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD-----DLTVKLWNW 126 (814)
T ss_dssp CEEEEEEEGGGTEEEEEE-TTS----EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET-----TSEEEEEEG
T ss_pred cEEEEEEeCCCCEEEEEe-CCC----eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcC-----CCEEEEEEC
Confidence 467889999999999885 344 49999999998654322 446788999999998876532 236778888
Q ss_pred CCCCceeEEeeecCcceEEEEEEcC-CCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-Cc-eEEEEee--cCCEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTK-DFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-GL-AHCIVEH--HEGFL 277 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~~-~~~~~~~--dg~~l 277 (728)
.++......+... ......+.|+| |++.|+..+.+ ..|.+.|+.++.. ...+.... .. ....+.+ ++..|
T Consensus 127 ~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~~d---g~v~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 127 ENNWALEQTFEGH-EHFVMCVAFNPKDPSTFASGCLD---RTVKVWSLGQSTP-NFTLTTGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp GGTSEEEEEEECC-SSCEEEEEEETTEEEEEEEEETT---SEEEEEETTCSSC-SEEEECCCTTCCCEEEECCSTTCCEE
T ss_pred CCCceEEEEEcCC-CCcEEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCcc-eeEEecCCCCCEEEEEEEECCCCCEE
Confidence 7653222222222 22345688999 78777665543 3688889876432 23333222 22 2234445 66655
Q ss_pred EEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecCC
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
+..+. ++ .|...+.. . ......+.. ....+..+.+.. +.++++...+|. |.++++.+
T Consensus 202 ~~~~~-dg--------~i~~~d~~-~---~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~--v~vwd~~~ 259 (814)
T 3mkq_A 202 ITASD-DL--------TIKIWDYQ-T---KSCVATLEG-HMSNVSFAVFHPTLPIIISGSEDGT--LKIWNSST 259 (814)
T ss_dssp EEECT-TS--------EEEEEETT-T---TEEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSC--EEEEETTT
T ss_pred EEEeC-CC--------EEEEEECC-C---CcEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCe--EEEEECCC
Confidence 54432 22 24444443 1 111111221 233466666654 335555555553 55566554
No 351
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.79 E-value=0.0016 Score=73.13 Aligned_cols=194 Identities=7% Similarity=-0.039 Sum_probs=107.3
Q ss_pred eeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC--CC
Q 004839 129 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG--ST 205 (728)
Q Consensus 129 ~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~--t~ 205 (728)
+.|+.|...++|......+ .|.|+|+++++.+.... ......+.+||||+++|.. .. ...|..+|+. +.
T Consensus 159 ~~~~~d~~~~~~V~~~~~~---~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~-~~----dg~V~viD~~~~t~ 230 (567)
T 1qks_A 159 QMNDWDLENLFSVTLRDAG---QIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVI-GR----DGKVNMIDLWMKEP 230 (567)
T ss_dssp CCSCCCGGGEEEEEETTTT---EEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEE-ET----TSEEEEEETTSSSC
T ss_pred cccccCCCceEEEEeCCCC---eEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEE-cC----CCeEEEEECCCCCC
Confidence 3467776666777665443 59999999998765322 2244578999999987765 32 3479999995 54
Q ss_pred CceeEEeeecCcceEEEEEEc----CCCCEEEEEEcCCCceEEEEEeCCCCCCCe-EEeeecC---C--------c-eEE
Q 004839 206 DEDALLLEESNENVYVNIRHT----KDFHFVCVHTFSTTSSKVFLINAADPFSGL-TLIWECE---G--------L-AHC 268 (728)
Q Consensus 206 ~~~~lv~~~~~~~~~~~~~~S----pDg~~l~~~~~~~~~~~l~~~dl~~~~~~~-~~l~~~~---~--------~-~~~ 268 (728)
+....+-... .-.++.+| |||+++++..... ..+.++|..+ .++ +.+.-.. + . ...
T Consensus 231 ~~v~~i~~G~---~P~~ia~s~~~~pDGk~l~v~n~~~--~~v~ViD~~t--~~~~~~i~~~~~~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 231 TTVAEIKIGS---EARSIETSKMEGWEDKYAIAGAYWP--PQYVIMDGET--LEPKKIQSTRGMTYDEQEYHPEPRVAAI 303 (567)
T ss_dssp CEEEEEECCS---EEEEEEECCSTTCTTTEEEEEEEET--TEEEEEETTT--CCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred cEeEEEecCC---CCceeEEccccCCCCCEEEEEEccC--CeEEEEECCC--CcEEEEEeccccccccccccCCCceEEE
Confidence 3211121111 22457889 6999998876532 4577889877 333 2222110 1 1 122
Q ss_pred EEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEE
Q 004839 269 IVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSV 346 (728)
Q Consensus 269 ~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~ 346 (728)
..++++..+++.. .+. .+|..++.. .. .... +..-..+..+.++.++ ++++++... +..+|.++
T Consensus 304 ~~s~~~~~~vv~~-~~~-------g~v~~vd~~-~~--~~~~-v~~i~~~~~~~d~~~~pdgr~~~va~~--~sn~V~Vi 369 (567)
T 1qks_A 304 LASHYRPEFIVNV-KET-------GKILLVDYT-DL--NNLK-TTEISAERFLHDGGLDGSHRYFITAAN--ARNKLVVI 369 (567)
T ss_dssp EECSSSSEEEEEE-TTT-------TEEEEEETT-CS--SEEE-EEEEECCSSEEEEEECTTSCEEEEEEG--GGTEEEEE
T ss_pred EEcCCCCEEEEEe-cCC-------CeEEEEecC-CC--ccce-eeeeeccccccCceECCCCCEEEEEeC--CCCeEEEE
Confidence 3356666555433 322 357777654 21 1111 1111112234444444 455555543 34568888
Q ss_pred ecCCC
Q 004839 347 SLPLP 351 (728)
Q Consensus 347 ~l~~~ 351 (728)
|..++
T Consensus 370 D~~t~ 374 (567)
T 1qks_A 370 DTKEG 374 (567)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 87654
No 352
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.78 E-value=0.0013 Score=68.63 Aligned_cols=140 Identities=9% Similarity=-0.003 Sum_probs=87.4
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|+|||++|+-.. .+|. |+++|+.+++...... ...+..++|+||++.|+-...+ ..|...|+
T Consensus 186 ~v~~~~~~~~~~~l~sg~-~d~~----v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d-----~~v~iwd~ 255 (340)
T 1got_B 186 DVMSLSLAPDTRLFVSGA-CDAS----AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD-----ATCRLFDL 255 (340)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSC----EEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred ceEEEEECCCCCEEEEEe-CCCc----EEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCC-----CcEEEEEC
Confidence 466788999999887664 4554 9999999987654322 3467889999999977665432 35778888
Q ss_pred CCCCceeEEeeecC-cceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE-EEEeecCCEEEE
Q 004839 203 GSTDEDALLLEESN-ENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFLYL 279 (728)
Q Consensus 203 ~t~~~~~lv~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~ 279 (728)
.+++. ...+.... ......+.|+|||++|+..+.+ ..|.+.|+.+.. ....+......+. ..++++|..|+-
T Consensus 256 ~~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d---~~i~vwd~~~~~-~~~~~~~h~~~v~~~~~s~dg~~l~s 329 (340)
T 1got_B 256 RADQE-LMTYSHDNIICGITSVSFSKSGRLLLAGYDD---FNCNVWDALKAD-RAGVLAGHDNRVSCLGVTDDGMAVAT 329 (340)
T ss_dssp TTTEE-EEEECCTTCCSCEEEEEECTTSSEEEEEETT---SEEEEEETTTCC-EEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred CCCcE-EEEEccCCcccceEEEEECCCCCEEEEECCC---CeEEEEEcccCc-EeeEeecCCCcEEEEEEcCCCCEEEE
Confidence 76532 22222111 1124568899999998766543 368888987632 2233332223222 234566655543
No 353
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.76 E-value=0.0082 Score=63.90 Aligned_cols=197 Identities=9% Similarity=0.013 Sum_probs=123.2
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
...+.|.++++.|.|+ |..+. .|+.++++++....+.. ......++..+.+..||++... ...|++.++.
T Consensus 118 ~~gl~~d~~~~~ly~~-D~~~~---~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~----~~~I~~~~~d 189 (386)
T 3v65_B 118 AIALDFHHRRELVFWS-DVTLD---RILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG----TSRIEVANLD 189 (386)
T ss_dssp EEEEEEETTTTEEEEE-ETTTT---EEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETT----TTEEEECBTT
T ss_pred cEEEEEecCCCeEEEE-eCCCC---cEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCC----CCeEEEEeCC
Confidence 4567799988888666 65543 48999998876433322 2244678888888889887432 3478888886
Q ss_pred CCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC--ceEEEEeecCCEEEEEE
Q 004839 204 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG--LAHCIVEHHEGFLYLFT 281 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~--~~~~~~~~dg~~l~~~t 281 (728)
......++.... ..-.++.+.|++.+|+++.... ...|+++++++ ...+.+....- .....++++++.||+..
T Consensus 190 g~~~~~l~~~~l--~~P~giavdp~~g~ly~td~~~-~~~I~r~~~dG--~~~~~~~~~~~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 190 GAHRKVLLWQSL--EKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp SCSCEEEECSSC--SCEEEEEEETTTTEEEEEECSS-SCEEEEEETTS--CSCEEEECSSCSCEEEEEEEGGGTEEEEEE
T ss_pred CCceEEeecCCC--CCCcEEEEEcCCCeEEEeccCC-CCEEEEEeCCC--CCcEEEEECCCCCeeeEEEeCCCCEEEEEE
Confidence 543333332221 1234678899999998876533 46899999976 23344433221 12345677889998864
Q ss_pred cCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCC
Q 004839 282 DAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 282 n~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
.. +.+|.+++.+ . ..-+.++... .....++.++++.||+....+ .+|.+++..+
T Consensus 265 ~~--------~~~I~~~d~d-G---~~~~~~~~~~-~~~P~giav~~~~ly~td~~~--~~V~~~~~~~ 318 (386)
T 3v65_B 265 AK--------HHVIERANLD-G---SHRKAVISQG-LPHPFAITVFEDSLYWTDWHT--KSINSANKFT 318 (386)
T ss_dssp TT--------TTEEEEECTT-S---CSCEEEECSS-CSSEEEEEEETTEEEEEETTT--TEEEEEETTT
T ss_pred CC--------CCEEEEEeCC-C---CeeEEEEECC-CCCceEEEEECCEEEEeeCCC--CeEEEEECCC
Confidence 32 2468888876 2 2233344322 335678888889888886544 3677777443
No 354
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.75 E-value=0.008 Score=64.44 Aligned_cols=141 Identities=6% Similarity=0.046 Sum_probs=87.1
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++|+-.. .+|. |+|+|+.+|+...... ...+..++|+|||+.|+-...| ..|...|+
T Consensus 110 ~V~~~~~~p~~~~l~s~s-~Dg~----i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D-----~~i~iwd~ 179 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSAS-EDAT----IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD-----MTIKLWDF 179 (410)
T ss_dssp CEEEEEECSSSSEEEEEE-SSSC----EEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT-----SCCCEEET
T ss_pred cEEEEEEcCCCCEEEEEe-CCCe----EEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeC
Confidence 567788999999887764 4554 9999999997654322 3467889999999976655433 24666677
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE-EEEeecCCEEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFLYLFT 281 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~t 281 (728)
.+... ...+.... .....+.++|||++|+..+.+ ..|.+.|+.++. ....+......+. ..+++++..|+..+
T Consensus 180 ~~~~~-~~~~~~h~-~~V~~v~~~p~~~~l~s~s~D---~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 180 QGFEC-IRTMHGHD-HNVSSVSIMPNGDHIVSASRD---KTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp TSSCE-EECCCCCS-SCEEEEEECSSSSEEEEEETT---SEEEEEETTTCC-EEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCce-eEEEcCCC-CCEEEEEEeCCCCEEEEEeCC---CeEEEEECCCCc-EEEEEeCCCccEEEEEECCCCCEEEEEc
Confidence 65431 11222222 234568899999988755543 368888988732 2233333333322 23445666554433
No 355
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.73 E-value=0.014 Score=61.16 Aligned_cols=197 Identities=9% Similarity=0.016 Sum_probs=122.7
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
...+.|+|+++.|.|+ |..+. .|+.++++++....+.. ......++..+.+..||++... ...|++.++.
T Consensus 75 ~~~l~~d~~~~~ly~~-D~~~~---~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~----~~~I~~~~~d 146 (349)
T 3v64_C 75 AIALDFHHRRELVFWS-DVTLD---RILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG----TSRIEVANLD 146 (349)
T ss_dssp EEEEEEETTTTEEEEE-ETTTT---EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT----TTEEEEEETT
T ss_pred eEEEEEeccccEEEEE-eccCC---ceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCC----CCeEEEEcCC
Confidence 4466789988888776 65543 48899998876443322 2344678888888889887432 3479999987
Q ss_pred CCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC--ceEEEEeecCCEEEEEE
Q 004839 204 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG--LAHCIVEHHEGFLYLFT 281 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~--~~~~~~~~dg~~l~~~t 281 (728)
......++... -..-.++++.|++.+|+++.... ...|+++++++ ...+.+....- .....++++++.||+..
T Consensus 147 G~~~~~l~~~~--l~~P~~iavdp~~g~ly~td~~~-~~~I~r~~~dG--~~~~~~~~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 147 GAHRKVLLWQS--LEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp SCSCEEEECTT--CSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTS--CSCEESCCSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEeCC--CCCcceEEEecCcCeEEEeccCC-CCEEEEEeCCC--CCcEEEEECCCCCcceEEEeCCCCEEEEEE
Confidence 54333333221 11234678899888998876543 46899999976 33344432221 12345677889998864
Q ss_pred cCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCC
Q 004839 282 DAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 282 n~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
... .+|.+++.+ . ..-+.++... .....++.++++.||+....++ +|.+++..+
T Consensus 222 ~~~--------~~I~~~~~d-G---~~~~~~~~~~-~~~P~giav~~~~ly~td~~~~--~V~~~~~~~ 275 (349)
T 3v64_C 222 AKH--------HVIERANLD-G---SHRKAVISQG-LPHPFAITVFEDSLYWTDWHTK--SINSANKFT 275 (349)
T ss_dssp TTT--------TEEEEEETT-S---CSCEEEECSS-CSSEEEEEEETTEEEEEETTTT--EEEEEETTT
T ss_pred CCC--------CEEEEEeCC-C---CceEEEEeCC-CCCceEEEEECCEEEEecCCCC--eEEEEEccC
Confidence 322 468888876 2 2233444322 3346778888888888865443 567776433
No 356
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.73 E-value=0.012 Score=62.69 Aligned_cols=114 Identities=15% Similarity=0.048 Sum_probs=72.9
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEec-CCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAK-DGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|+|||++|+... .++ .|+++|+.+++...... ...+..++|+| ||+.|+....+ ..|...|+
T Consensus 167 ~v~~~~~~p~~~~l~s~s-~d~----~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~ 236 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVSGS-GDR----TVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLD-----RAVRVWDS 236 (393)
T ss_dssp CEEEEEECTTSSEEEEEE-TTS----EEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETT-----SCEEEEET
T ss_pred CEEEEEEcCCCCEEEEec-CCC----cEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCC-----CcEEEEEC
Confidence 467789999999997654 444 49999999987554322 44677899999 88877665432 25777788
Q ss_pred CCCCceeEEee-----ecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 203 GSTDEDALLLE-----ESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 203 ~t~~~~~lv~~-----~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
.++.....+.. .........+.|+|||++|+..+.+ ..|.+.|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d---~~v~~wd~~~ 287 (393)
T 1erj_A 237 ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD---RSVKLWNLQN 287 (393)
T ss_dssp TTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT---SEEEEEEC--
T ss_pred CCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC---CEEEEEECCC
Confidence 76642111110 0111234568999999998655443 3577777764
No 357
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.72 E-value=0.00073 Score=71.26 Aligned_cols=144 Identities=8% Similarity=0.000 Sum_probs=82.5
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCc--eeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA--LCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~--~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.+..++|||||++||... .+| .|+|+|+.++. ...... ...+..++|+||++.|+....+ ..|.+.
T Consensus 13 ~v~~~~~s~~g~~l~~~~-~d~----~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vw 82 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTT-ATN----QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVY 82 (377)
T ss_dssp CCSCCEECSSSSEEECCC-SSS----CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC
T ss_pred cEEEEEECCCCCEEEEec-CCC----EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEE
Confidence 466788999999998763 344 38999999883 332221 3467889999999877766432 257777
Q ss_pred ECCCCC--ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCC--CeEEeee-cCCce-EEEEeecC
Q 004839 201 IIGSTD--EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFS--GLTLIWE-CEGLA-HCIVEHHE 274 (728)
Q Consensus 201 ~l~t~~--~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~--~~~~l~~-~~~~~-~~~~~~dg 274 (728)
++.++. .....+.... .....+.|+|||++|+..+.+. .|.+.|+.++.. ..+.+.. ....+ ...+++++
T Consensus 83 d~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 158 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLN-RAATFVRWSPNEDKFAVGSGAR---VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN 158 (377)
T ss_dssp ------CCCCEEECCCCS-SCEEEEECCTTSSCCEEEESSS---CEEECCC-----CCCCEEECSSCCSCEEEEEECTTS
T ss_pred EcCCCCceeeeeEecccC-CceEEEEECCCCCEEEEEecCC---eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC
Confidence 776653 1222222222 2345689999999887766533 477778776321 1344443 22222 23456777
Q ss_pred CEEEEEEc
Q 004839 275 GFLYLFTD 282 (728)
Q Consensus 275 ~~l~~~tn 282 (728)
..|+..+.
T Consensus 159 ~~l~~~~~ 166 (377)
T 3dwl_C 159 VLLAAGCA 166 (377)
T ss_dssp SEEEEEES
T ss_pred CEEEEEeC
Confidence 76665544
No 358
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.71 E-value=0.0057 Score=66.01 Aligned_cols=205 Identities=10% Similarity=0.065 Sum_probs=116.8
Q ss_pred EeeceeeCCCCC-EEEEEEEcCCCcEEEEEEEECCCCceec--------cC-ccceeeeEEEecCCCEEEEEEecCCCCc
Q 004839 125 YEELSEVSPDHK-FLAYTMYDKDNDYFTLSVRNLNSGALCS--------KP-QAVRVSNIAWAKDGQALIYVVTDQNKRP 194 (728)
Q Consensus 125 ~~~~~~~SPDG~-~lA~~~~~~g~e~~~l~v~dl~tg~~~~--------~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~ 194 (728)
.+..+.|+|+++ +|+.. ..+|. |+++|+.++.... .. ....+..++|+|++..++++... .
T Consensus 183 ~v~~l~~~~~~~~~l~s~-~~dg~----i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~----d 253 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSA-SDDHT----ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD----D 253 (430)
T ss_dssp CCCCEEECTTSTTEEEEE-CTTSC----EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET----T
T ss_pred CeEEEEeCCCCCCeEEEE-eCCCe----EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC----C
Confidence 356789999999 66554 45554 9999998853211 11 13357789999966656666543 2
Q ss_pred ceeEEEECCCCC--ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce-EEEEe
Q 004839 195 YQIYCSIIGSTD--EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCIVE 271 (728)
Q Consensus 195 ~~v~~~~l~t~~--~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~~~ 271 (728)
..|+.+|+.++. .....+.... .....+.|+|++++++++.... ..|.++|+.........+......+ ...++
T Consensus 254 g~i~i~d~~~~~~~~~~~~~~~~~-~~v~~i~~~p~~~~~l~tg~~d--g~v~vwd~~~~~~~~~~~~~h~~~v~~i~~s 330 (430)
T 2xyi_A 254 QKLMIWDTRNNNTSKPSHTVDAHT-AEVNCLSFNPYSEFILATGSAD--KTVALWDLRNLKLKLHSFESHKDEIFQVQWS 330 (430)
T ss_dssp SEEEEEETTCSCSSSCSEEEECCS-SCEEEEEECSSCTTEEEEEETT--SEEEEEETTCTTSCSEEEECCSSCEEEEEEC
T ss_pred CeEEEEECCCCCCCcceeEeecCC-CCeEEEEeCCCCCCEEEEEeCC--CeEEEEeCCCCCCCeEEeecCCCCEEEEEEC
Confidence 478888987652 1222222222 2245688999999766665543 3588889876433344444333332 33556
Q ss_pred ecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCC------CCCCeEEee-cCCCceEEEEEeeCC--EEEEEEecCCeeE
Q 004839 272 HHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFP------SRTWESVFI-DDQGLVVEDVDFCKT--HMALILREGRTYR 342 (728)
Q Consensus 272 ~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~li~-~~~~~~i~~~~~~~~--~lv~~~~~~g~~~ 342 (728)
++++.+++....++ ..+|+.+....... ....+.+.. ......+..+.+..+ .+++....+|.-+
T Consensus 331 p~~~~~l~s~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~ 404 (430)
T 2xyi_A 331 PHNETILASSGTDR------RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 404 (430)
T ss_dssp SSCTTEEEEEETTS------CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred CCCCCEEEEEeCCC------cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEE
Confidence 77776666555443 24566554310000 000122222 222345778887753 3777777777666
Q ss_pred EEEEe
Q 004839 343 LCSVS 347 (728)
Q Consensus 343 l~~~~ 347 (728)
++.++
T Consensus 405 iw~~~ 409 (430)
T 2xyi_A 405 VWQMA 409 (430)
T ss_dssp EEEEC
T ss_pred EeEcc
Confidence 65553
No 359
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.71 E-value=0.0022 Score=69.05 Aligned_cols=76 Identities=9% Similarity=-0.044 Sum_probs=51.7
Q ss_pred ceeeCCCCCEEEEEEEc-----CCCcEEEEEEEECCCCceeccCc-c--------ceeeeEEEecCCCEEEEEEecCCCC
Q 004839 128 LSEVSPDHKFLAYTMYD-----KDNDYFTLSVRNLNSGALCSKPQ-A--------VRVSNIAWAKDGQALIYVVTDQNKR 193 (728)
Q Consensus 128 ~~~~SPDG~~lA~~~~~-----~g~e~~~l~v~dl~tg~~~~~~~-~--------~~~~~~~WspDg~~l~y~~~~~~~~ 193 (728)
.+.+||||++|..+... .|.....|.++|+++++.+.... . .....+.++|||++||.+... .
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~---~ 198 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS---P 198 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS---S
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC---C
Confidence 57799999988665321 12234579999999998654321 1 134578999999998876422 1
Q ss_pred cceeEEEECCCCC
Q 004839 194 PYQIYCSIIGSTD 206 (728)
Q Consensus 194 ~~~v~~~~l~t~~ 206 (728)
...|..+|+.+.+
T Consensus 199 ~~~VsVID~~t~k 211 (426)
T 3c75_H 199 APAVGVVDLEGKT 211 (426)
T ss_dssp SCEEEEEETTTTE
T ss_pred CCeEEEEECCCCe
Confidence 3468888988764
No 360
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.68 E-value=0.0031 Score=67.10 Aligned_cols=193 Identities=13% Similarity=0.097 Sum_probs=107.7
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceec-cCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS-KPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~-~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++||... .+|. |+++|. +++... ... ...+..+.|+||++.|+....+ ..|..+++
T Consensus 110 ~v~~~~~s~~~~~l~~~~-~dg~----i~i~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~ 178 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGV-ENGE----LRLWNK-TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVE-----NVTILWNV 178 (425)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSC----EEEEET-TSCEEEEECCCCSCEEEEEECTTSSEEEEEETT-----CCEEEEET
T ss_pred ceEEEEEcCCCCEEEEEe-CCCe----EEEEeC-CCCeeeeccCCCccEEEEEECCCCCEEEEEecC-----CeEEEEEC
Confidence 577889999999998874 4553 889994 444333 322 4467889999999988766432 35788888
Q ss_pred CCCCceeEEeeecCcc--------------eEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce-E
Q 004839 203 GSTDEDALLLEESNEN--------------VYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-H 267 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~--------------~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~-~ 267 (728)
.++.... .+...... ....+.+++++.. +.... ...|+++|+.++. ....+......+ .
T Consensus 179 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~g~i~~~d~~~~~-~~~~~~~~~~~i~~ 252 (425)
T 1r5m_A 179 ISGTVMQ-HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKF-VIPGP---KGAIFVYQITEKT-PTGKLIGHHGPISV 252 (425)
T ss_dssp TTTEEEE-EECCC---------------CCCBSCCEEEETTEE-EEECG---GGCEEEEETTCSS-CSEEECCCSSCEEE
T ss_pred CCCcEEE-EeeccccCccceeeccccCCcceeeEEEEcCCCEE-EEEcC---CCeEEEEEcCCCc-eeeeeccCCCceEE
Confidence 7654211 11111110 0234577888763 33322 2468899998742 223333222222 2
Q ss_pred EEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEe
Q 004839 268 CIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVS 347 (728)
Q Consensus 268 ~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~ 347 (728)
..+++++..|+..+. ++ .|...++. . ...... +.. ....+..+.+..+.++++...++ .+.+++
T Consensus 253 ~~~~~~~~~l~~~~~-d~--------~i~i~d~~-~--~~~~~~-~~~-~~~~i~~~~~~~~~~l~~~~~d~--~i~i~d 316 (425)
T 1r5m_A 253 LEFNDTNKLLLSASD-DG--------TLRIWHGG-N--GNSQNC-FYG-HSQSIVSASWVGDDKVISCSMDG--SVRLWS 316 (425)
T ss_dssp EEEETTTTEEEEEET-TS--------CEEEECSS-S--BSCSEE-ECC-CSSCEEEEEEETTTEEEEEETTS--EEEEEE
T ss_pred EEECCCCCEEEEEcC-CC--------EEEEEECC-C--CccceE-ecC-CCccEEEEEECCCCEEEEEeCCC--cEEEEE
Confidence 345677776655443 22 24444443 1 112222 222 23456777777544556656665 566677
Q ss_pred cCC
Q 004839 348 LPL 350 (728)
Q Consensus 348 l~~ 350 (728)
+.+
T Consensus 317 ~~~ 319 (425)
T 1r5m_A 317 LKQ 319 (425)
T ss_dssp TTT
T ss_pred CCC
Confidence 654
No 361
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.68 E-value=0.0049 Score=63.86 Aligned_cols=198 Identities=7% Similarity=-0.101 Sum_probs=108.3
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc---cceeeeEEEecC---CCEEEEEEecCCCCcceeE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKD---GQALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspD---g~~l~y~~~~~~~~~~~v~ 198 (728)
.+..++|||||+.++.+.... .+...|+|+|+.+++...... ...+..++|+|| |+.|+....+ ..|.
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~-~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~ 93 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFA-RGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG-----GNLH 93 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC---CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT-----SCEE
T ss_pred ceEEEEEcCCCceEEEecCcc-CCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC-----CeEE
Confidence 577888999998887664321 113469999999987654322 346788999999 5766655322 3688
Q ss_pred EEECCCCCceeEEeeecCcceEEEE------EEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC----ceEE
Q 004839 199 CSIIGSTDEDALLLEESNENVYVNI------RHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG----LAHC 268 (728)
Q Consensus 199 ~~~l~t~~~~~lv~~~~~~~~~~~~------~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~----~~~~ 268 (728)
.+++.++......+...... ...+ .++||+++|+..+.+ ..|.+.|+.++......+..... .+..
T Consensus 94 iwd~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~s~~~~~l~~~~~d---~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~ 169 (357)
T 3i2n_A 94 IWNLEAPEMPVYSVKGHKEI-INAIDGIGGLGIGEGAPEIVTGSRD---GTVKVWDPRQKDDPVANMEPVQGENKRDCWT 169 (357)
T ss_dssp EECTTSCSSCSEEECCCSSC-EEEEEEESGGGCC-CCCEEEEEETT---SCEEEECTTSCSSCSEEECCCTTSCCCCEEE
T ss_pred EEeCCCCCccEEEEEecccc-eEEEeeccccccCCCccEEEEEeCC---CeEEEEeCCCCCCcceeccccCCCCCCceEE
Confidence 88887765222233322221 2233 468999998766553 35888898874323344433222 1111
Q ss_pred -E----EeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee----CCEEEEEEecCC
Q 004839 269 -I----VEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC----KTHMALILREGR 339 (728)
Q Consensus 269 -~----~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~----~~~lv~~~~~~g 339 (728)
. +++++..|+..+..+ .|...++. . ........ ....+..+.+. ++..+++...+|
T Consensus 170 ~~~~~~~~~~~~~l~~~~~d~---------~i~i~d~~-~---~~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 170 VAFGNAYNQEERVVCAGYDNG---------DIKLFDLR-N---MALRWETN--IKNGVCSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp EEEECCCC-CCCEEEEEETTS---------EEEEEETT-T---TEEEEEEE--CSSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred EEEEeccCCCCCEEEEEccCC---------eEEEEECc-c---CceeeecC--CCCceEEEEcCCCCCCCCEEEEECCCC
Confidence 1 346666665544322 35555554 1 11111112 23456666665 344555556666
Q ss_pred eeEEEEEecC
Q 004839 340 TYRLCSVSLP 349 (728)
Q Consensus 340 ~~~l~~~~l~ 349 (728)
. +.++++.
T Consensus 235 ~--i~i~d~~ 242 (357)
T 3i2n_A 235 K--FHVFDMR 242 (357)
T ss_dssp E--EEEEEEE
T ss_pred e--EEEEeCc
Confidence 4 4455543
No 362
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=97.62 E-value=0.00014 Score=74.05 Aligned_cols=95 Identities=16% Similarity=0.008 Sum_probs=66.6
Q ss_pred CccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 574 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 574 (728)
..|.|+++||..+.. ..|......|. +.|+.+|.++.. ...+++++.+.+..+++.-. ..
T Consensus 23 ~~~~l~~~hg~~~~~--~~~~~~~~~L~---~~v~~~d~~~~~--------------~~~~~~~~a~~~~~~i~~~~-~~ 82 (283)
T 3tjm_A 23 SERPLFLVHPIEGST--TVFHSLASRLS---IPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQVQ-PE 82 (283)
T ss_dssp SSCCEEEECCTTCCS--GGGHHHHHHCS---SCEEEECCCTTS--------------CCSCHHHHHHHHHHHHTTTC-CS
T ss_pred CCCeEEEECCCCCCH--HHHHHHHHhcC---ceEEEEecCCCC--------------CCCCHHHHHHHHHHHHHHhC-CC
Confidence 346688999976643 55766666664 899999996422 12467777665555554321 23
Q ss_pred CcEEEEEeCccHHHHHHHHHhC---CCcee---EEEEeCCc
Q 004839 575 HKLAGWGYSAGGLLVAAAINCC---PDLFR---AVVLEVPF 609 (728)
Q Consensus 575 ~ri~i~G~S~GG~~~~~~~~~~---p~~f~---a~v~~~p~ 609 (728)
+++.++||||||.++..++.+. |++++ .+|+..+.
T Consensus 83 ~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~ 123 (283)
T 3tjm_A 83 GPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 123 (283)
T ss_dssp SCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCC
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCC
Confidence 6899999999999999988754 78887 88877654
No 363
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.60 E-value=0.00068 Score=71.73 Aligned_cols=117 Identities=14% Similarity=0.024 Sum_probs=74.5
Q ss_pred eCCCCCEEEEEEEcCC-CcEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecC-----CCCcceeEEEECCC
Q 004839 131 VSPDHKFLAYTMYDKD-NDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQ-----NKRPYQIYCSIIGS 204 (728)
Q Consensus 131 ~SPDG~~lA~~~~~~g-~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~-----~~~~~~v~~~~l~t 204 (728)
..|||+++ |..+... .....|+|+|+++++.+.....+....+..||||+.||.+..-. ..+...|..+|..+
T Consensus 40 ~~pd~~~v-yV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 40 PAPDARRV-YVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CCCCTTEE-EEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred cCCCCCEE-EEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 57999987 5556531 01147999999999876543322222499999999888764210 01234688999988
Q ss_pred CC-ceeEEeee-------cCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCC
Q 004839 205 TD-EDALLLEE-------SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 205 ~~-~~~lv~~~-------~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
.+ ...+.... ..+. .+.+||||++|++... ...+.|.++|+++.
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~---~~a~spDGk~lyVan~-~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPW---MTSLTPDGKTLLFYQF-SPAPAVGVVDLEGK 170 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGG---GEEECTTSSEEEEEEC-SSSCEEEEEETTTT
T ss_pred CeEEEEEECCCccccccCCCCc---eEEEcCCCCEEEEEEc-CCCCeEEEEECCCC
Confidence 76 23332211 1121 2578999999887643 22457999999883
No 364
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.58 E-value=0.0057 Score=68.49 Aligned_cols=138 Identities=15% Similarity=0.069 Sum_probs=83.4
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceecc-Cc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK-PQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~-~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++||... .++ .|+++|.. ++.+.. .. ...+..++|+||++.|+....+ ..|...++
T Consensus 387 ~v~~~~~s~dg~~l~~~~-~d~----~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-----~~v~~w~~ 455 (577)
T 2ymu_A 387 SVRGVAFSPDGQTIASAS-DDK----TVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDD-----KTVKLWNR 455 (577)
T ss_dssp CEEEEEECTTSSCEEEEE-TTS----EEEEECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SEEEEEET
T ss_pred CeEEEEECCCCCEEEEEe-CCC----EEEEEeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCC-----CEEEEEEC
Confidence 456788999999998764 343 48889964 443332 22 3466789999999988765432 35667776
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce-EEEEeecCCEEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEGFLYLFT 281 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~~~~dg~~l~~~t 281 (728)
...... .+.... .....+.+||||++|+..+.+ ..|.+.|..+ ...+.+......+ ...++++|+.|+..+
T Consensus 456 ~~~~~~--~~~~~~-~~v~~~~~spd~~~las~~~d---~~i~iw~~~~--~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 456 NGQLLQ--TLTGHS-SSVRGVAFSPDGQTIASASDD---KTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp TSCEEE--EEECCS-SCEEEEEECTTSCEEEEEETT---SEEEEEETTS--CEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred CCCEEE--EEcCCC-CCEEEEEEcCCCCEEEEEeCC---CEEEEEcCCC--CEEEEEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 432111 222222 223568899999998765543 3577778653 2334444333333 234678887665543
No 365
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.58 E-value=0.015 Score=60.26 Aligned_cols=244 Identities=11% Similarity=0.063 Sum_probs=123.8
Q ss_pred CCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCceeEE
Q 004839 133 PDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALL 211 (728)
Q Consensus 133 PDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~~~lv 211 (728)
.++++|..+ ...++ .|.++|+++++.+.... ......+++++|| .||.+... ...|+++|+.+.+....+
T Consensus 51 ~~~~~lyv~-~~~~~---~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~----~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 51 IRDGIGWIV-VNNSH---VIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIW----DYRIFIINPKTYEITGYI 121 (328)
T ss_dssp EETTEEEEE-EGGGT---EEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBS----CSEEEEEETTTTEEEEEE
T ss_pred EECCEEEEE-EcCCC---EEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECC----CCeEEEEECCCCeEEEEE
Confidence 356666444 33322 49999999998754322 3356678899998 56555322 347999999876522112
Q ss_pred eeecCc---ceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCCEEEEEEcCCccC-
Q 004839 212 LEESNE---NVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKEG- 287 (728)
Q Consensus 212 ~~~~~~---~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~~- 287 (728)
-..... ....++.+ +++.|++.... ....|+++|+++.+ ....+..........++++| .+|+.++.....
T Consensus 122 ~~g~~~~~~~~p~~i~~--~~~~lyv~~~~-~~~~v~viD~~t~~-~~~~i~~g~~p~~i~~~~dG-~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ--YGKYVYVNCWS-YQNRILKIDTETDK-VVDELTIGIQPTSLVMDKYN-KMWTITDGGYEGS 196 (328)
T ss_dssp ECTTCCTTTCBCCCEEE--ETTEEEEEECT-TCCEEEEEETTTTE-EEEEEECSSCBCCCEECTTS-EEEEEBCCBCTTC
T ss_pred EcCCccccCCCcceEEE--ECCEEEEEcCC-CCCEEEEEECCCCe-EEEEEEcCCCccceEEcCCC-CEEEEECCCccCC
Confidence 111100 01122444 56777766431 24579999998732 12233222222223445554 577766543110
Q ss_pred -CCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCCCCCCcceeeccccc
Q 004839 288 -QEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHP 364 (728)
Q Consensus 288 -~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~ 364 (728)
.......|++++.+ . .+....+.-..+....++.+. ++.||+... .++++|..+++ +.. .
T Consensus 197 ~~~~~~~~v~~id~~-t---~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-----~v~~~d~~t~~------~~~--~ 259 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAE-T---FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-----DIWRMPVEADR------VPV--R 259 (328)
T ss_dssp SSCBCCCEEEEEETT-T---TEEEEEEECCTTCCCEEEEECTTSCEEEEESS-----SEEEEETTCSS------CCS--S
T ss_pred ccccCCceEEEEECC-C---CeEEEEEecCCCCCceeEEEecCCCEEEEEcc-----EEEEEECCCCc------eee--e
Confidence 00001468888765 1 222222221112235566666 456666532 68889876543 100 0
Q ss_pred ccccC-CCceeeeecCCCccCCCcEEEEEE-ccCCCCceEEEEECCCCeE
Q 004839 365 HFLPL-PKYVSQIVPGPNYDYYSSTMRFAI-SSPVMPDAVVDYDLSYGKW 412 (728)
Q Consensus 365 ~~~~~-p~~~~~i~~~~~~~~~~~~~~~~~-ss~~~p~~~~~~~~~~~~~ 412 (728)
..++. ......+ ..+++++.+.++- .+......++.+|.. ++.
T Consensus 260 ~~~~~~~~~p~gi----~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~ 304 (328)
T 3dsm_A 260 PFLEFRDTKYYGL----TVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKL 304 (328)
T ss_dssp CSBCCCSSCEEEE----EECTTTCCEEEEECTTSSSEEEEEEECTT-CCE
T ss_pred eeecCCCCceEEE----EEcCCCCeEEEEcccccccCCEEEEECCC-CCE
Confidence 01111 0112222 2344455555542 333556799999997 553
No 366
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.58 E-value=0.0015 Score=68.77 Aligned_cols=113 Identities=7% Similarity=0.070 Sum_probs=67.1
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCc----eeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA----LCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 199 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~----~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~ 199 (728)
.+..+.|||||++||... .+|. |+++|+.+++ ...... ...+..++|+||++.|+....+ ..|..
T Consensus 57 ~v~~~~~s~~~~~l~s~s-~d~~----v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i 126 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCS-QDRN----AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA-----RVISV 126 (377)
T ss_dssp CEEEEEECTTTCCEEEEE-TTSS----EEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS-----SCEEE
T ss_pred eEEEEEEeCCCCEEEEEe-CCCe----EEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecC-----CeEEE
Confidence 467788999999998774 4554 9999999987 222222 4467889999999988776433 25777
Q ss_pred EECCCCCc--eeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCC
Q 004839 200 SIIGSTDE--DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAA 250 (728)
Q Consensus 200 ~~l~t~~~--~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~ 250 (728)
.++.++.. -...+..........+.|+|||++|+..+.+. .|.+.|+.
T Consensus 127 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~ 176 (377)
T 3dwl_C 127 CYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR---KAYVLSAY 176 (377)
T ss_dssp CCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS---CEEEEEEC
T ss_pred EEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC---EEEEEEEE
Confidence 77766531 11122221223346789999999887766542 46666664
No 367
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.021 Score=58.93 Aligned_cols=202 Identities=14% Similarity=0.125 Sum_probs=101.2
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCc-------eecc-Cc-cceeeeEEEecCCCEEEEEEecCCCCcc
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA-------LCSK-PQ-AVRVSNIAWAKDGQALIYVVTDQNKRPY 195 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~-------~~~~-~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~ 195 (728)
.+..++|||||++||-.. .++. |+|+|++++. .+.. .. ...+..++|+|||+.|+-...| .
T Consensus 60 ~v~~v~~sp~~~~las~s-~D~~----v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D-----~ 129 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGS-FDST----VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD-----K 129 (330)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSC----EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT-----S
T ss_pred CEEEEEECCCCCEEEEEe-CCCc----EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC-----C
Confidence 467789999999998764 4553 8899986432 1111 11 3457789999999977665433 2
Q ss_pred eeEEEECCCC-Cc-e-eEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCe-EEeeecCCceE-EEE
Q 004839 196 QIYCSIIGST-DE-D-ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL-TLIWECEGLAH-CIV 270 (728)
Q Consensus 196 ~v~~~~l~t~-~~-~-~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~-~~l~~~~~~~~-~~~ 270 (728)
.|.+.++... .. . ...+.... .....+.|+||+++|+..+.+. .|.+.|+.++..+. ..+......+. ..+
T Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~s~s~D~---~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~ 205 (330)
T 2hes_X 130 SVWIWETDESGEEYECISVLQEHS-QDVKHVIWHPSEALLASSSYDD---TVRIWKDYDDDWECVAVLNGHEGTVWSSDF 205 (330)
T ss_dssp CEEEEECCTTCCCCEEEEEECCCS-SCEEEEEECSSSSEEEEEETTS---CEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred EEEEEeccCCCCCeEEEEEeccCC-CceEEEEECCCCCEEEEEcCCC---eEEEEECCCCCeeEEEEccCCCCcEEEEEe
Confidence 5777787432 21 1 12222222 2345689999999876555432 35555554321111 22222222222 234
Q ss_pred eecCC-EEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEE--eecCCCceEEEEEeeCCEEEEEEecCCeeEEEEE
Q 004839 271 EHHEG-FLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESV--FIDDQGLVVEDVDFCKTHMALILREGRTYRLCSV 346 (728)
Q Consensus 271 ~~dg~-~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l--i~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~ 346 (728)
+++++ .+++....++ ..+|+.+..........|..+ +.......+..+.+..+.+++....+|.-+|+-.
T Consensus 206 ~~~~~~~~l~s~s~D~------~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 206 DKTEGVFRLCSGSDDS------TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEE 278 (330)
T ss_dssp CCSSSSCEEEEEETTS------CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEE
T ss_pred cCCCCeeEEEEEeCCC------eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEc
Confidence 45532 2233333332 255665532201111223222 1111234566677666556666677775555433
No 368
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.57 E-value=0.038 Score=58.72 Aligned_cols=240 Identities=10% Similarity=0.034 Sum_probs=127.8
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc---cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
+..+.||+ +..++.+ .+| .|+++|+++|+...... ...+..++|+|||+.|+....+ ..|..+++
T Consensus 96 ~~~~~~s~-~~l~~~~--~d~----~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~ 163 (401)
T 4aez_A 96 LNLLDWSN-LNVVAVA--LER----NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN-----GLVDIYDV 163 (401)
T ss_dssp CBCEEECT-TSEEEEE--ETT----EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred EEEEeecC-CCEEEEE--CCC----eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC-----CeEEEEEC
Confidence 45566776 3444433 334 39999999998655432 3467889999999988776432 36888888
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE-EEEeecCCEEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFLYLFT 281 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~t 281 (728)
.+++... .+..... ....+.| ++++|+..+.+ ..|++.|+.........+......+. ..+++++..|+..+
T Consensus 164 ~~~~~~~-~~~~~~~-~v~~~~~--~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 236 (401)
T 4aez_A 164 ESQTKLR-TMAGHQA-RVGCLSW--NRHVLSSGSRS---GAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG 236 (401)
T ss_dssp TTCCEEE-EECCCSS-CEEEEEE--ETTEEEEEETT---SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCeEEE-EecCCCC-ceEEEEE--CCCEEEEEcCC---CCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe
Confidence 7764222 2222222 2334556 56766655443 46888898753333334433333332 34567777666554
Q ss_pred cCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC--CEEEEEEecCCeeEEEEEecCCCCCCcceee
Q 004839 282 DAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK--THMALILREGRTYRLCSVSLPLPAGKGVVHL 359 (728)
Q Consensus 282 n~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~ 359 (728)
..+ .|...++. . ......+. .....+..+.+.. ..+++.........|.++++.+++ .+
T Consensus 237 ~d~---------~v~iwd~~-~---~~~~~~~~-~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~-----~~ 297 (401)
T 4aez_A 237 NDN---------VVQIWDAR-S---SIPKFTKT-NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA-----RV 297 (401)
T ss_dssp TTS---------CEEEEETT-C---SSEEEEEC-CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC-----EE
T ss_pred CCC---------eEEEccCC-C---CCccEEec-CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC-----EE
Confidence 432 24444443 1 11111121 2233455666654 456665441122357778876542 11
Q ss_pred cccccccccCCCceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeEEE
Q 004839 360 KELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNI 414 (728)
Q Consensus 360 ~~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~~~ 414 (728)
..+.....+..+. ++.++..++....+.. ..+..+|+.+++...
T Consensus 298 -----~~~~~~~~v~~~~----~s~~~~~l~~~~g~~d--g~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 298 -----NTVDAGSQVTSLI----WSPHSKEIMSTHGFPD--NNLSIWSYSSSGLTK 341 (401)
T ss_dssp -----EEEECSSCEEEEE----ECSSSSEEEEEECTTT--CEEEEEEEETTEEEE
T ss_pred -----EEEeCCCcEEEEE----ECCCCCeEEEEeecCC--CcEEEEecCCcccee
Confidence 1233333343332 3456666655433222 477778877766544
No 369
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.57 E-value=0.031 Score=57.64 Aligned_cols=198 Identities=11% Similarity=0.053 Sum_probs=121.7
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceec-cC--ccceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS-KP--QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~-~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
...+.|.+.++.|.++ |..+. .|+.++++++.... +. .......+++.+.+..||++.. ....|.+.++
T Consensus 37 ~~~ld~d~~~~~lyw~-D~~~~---~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~----~~~~I~~~~~ 108 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWS-DVSEE---AIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS----ETNRIEVSNL 108 (318)
T ss_dssp EEEEEEEGGGTEEEEE-ETTTT---EEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEET----TTTEEEEEET
T ss_pred cEEEEEEeCCCEEEEE-ECCCC---cEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEEC----CCCEEEEEEC
Confidence 3456789988888665 65543 48889998874221 11 1224456888887888988742 2347899998
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-C-ceEEEEeecCCEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-G-LAHCIVEHHEGFLYLF 280 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~-~~~~~~~~dg~~l~~~ 280 (728)
.......++..... .-.++.+.|++.+|+++... ....|+++++++ ...+.+.... . .....++++++.||+.
T Consensus 109 dG~~~~~l~~~~~~--~P~giavdp~~g~ly~td~~-~~~~I~r~~~dG--~~~~~~~~~~l~~Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 109 DGSLRKVLFWQELD--QPRAIALDPSSGFMYWTDWG-EVPKIERAGMDG--SSRFIIINSEIYWPNGLTLDYEEQKLYWA 183 (318)
T ss_dssp TSCSCEEEECSSCS--SEEEEEEEGGGTEEEEEECS-SSCEEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred CCCcEEEEEeCCCC--CccEEEEeCCCCEEEEEecC-CCCEEEEEEcCC--CCeEEEEECCCCCccEEEEeccCCEEEEE
Confidence 65433333322222 22467788888888887643 246799999976 2333433222 1 1234567788999886
Q ss_pred EcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCCC
Q 004839 281 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 281 tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
-.. +.+|.+++.+ . ..-+.++. .......++.++++.+|+.... ..+|.+++..++
T Consensus 184 D~~--------~~~I~~~d~d-G---~~~~~~~~-~~~~~P~glav~~~~lywtd~~--~~~V~~~~~~~G 239 (318)
T 3sov_A 184 DAK--------LNFIHKSNLD-G---TNRQAVVK-GSLPHPFALTLFEDILYWTDWS--THSILACNKYTG 239 (318)
T ss_dssp ETT--------TTEEEEEETT-S---CSCEEEEC-SCCSCEEEEEEETTEEEEEETT--TTEEEEEETTTC
T ss_pred ECC--------CCEEEEEcCC-C---CceEEEec-CCCCCceEEEEeCCEEEEEecC--CCeEEEEECCCC
Confidence 432 2468888876 2 23344443 2234567888888998888543 346778876544
No 370
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.57 E-value=0.011 Score=66.97 Aligned_cols=114 Identities=11% Similarity=0.052 Sum_probs=73.2
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.||||++++..+...++. |.++|..+++...... ...+..++|+|||+.|+-...| ..|.+.++
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~----v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D-----~~i~lwd~ 219 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNT----VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD-----GTIVLYNG 219 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSC----EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred CceEEEECCCCCeEEEEEeCCCe----EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECC-----CcEEEEEC
Confidence 56788999999853334345554 8999998876544222 3467889999999977655433 35777787
Q ss_pred CCCCceeEEeee------cCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 203 GSTDEDALLLEE------SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 203 ~t~~~~~lv~~~------~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
.+++.. ..+.. ........+.|+|||++|+..+.+ ..|.+.|+.+
T Consensus 220 ~~g~~~-~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---~~v~lWd~~~ 270 (611)
T 1nr0_A 220 VDGTKT-GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---KTIKIWNVAT 270 (611)
T ss_dssp TTCCEE-EECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETTT
T ss_pred CCCcEe-eeeccccccccccCCCEEEEEECCCCCEEEEEeCC---CeEEEEeCCC
Confidence 766421 12211 122234578999999998765543 3466667665
No 371
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.56 E-value=0.022 Score=58.08 Aligned_cols=114 Identities=11% Similarity=0.014 Sum_probs=74.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+....|+|||++|+-.. .++ .|+++|+.+|+.+.... ...+..++|+||++.|+-...| ..|.+.|+
T Consensus 57 ~v~~~~~~~~~~~l~s~s-~d~----~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~ 126 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGS-DDF----RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNW 126 (304)
T ss_dssp CEEEEEEEGGGTEEEEEE-TTS----EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEG
T ss_pred cEEEEEEeCCCCEEEEEC-CCC----EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCC-----CeEEEEEC
Confidence 456778999999998764 344 49999999998654322 4467889999999977644322 35777788
Q ss_pred CCCCceeEEeeecCcceEEEEEEcC-CCCEEEEEEcCCCceEEEEEeCCCC
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTK-DFHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
.++..-...+... ......+.|+| |++.|+..+.+ ..|.+.|+...
T Consensus 127 ~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~sgs~D---~~v~iwd~~~~ 173 (304)
T 2ynn_A 127 ENNWALEQTFEGH-EHFVMCVAFNPKDPSTFASGCLD---RTVKVWSLGQS 173 (304)
T ss_dssp GGTTEEEEEECCC-CSCEEEEEECTTCTTEEEEEETT---SEEEEEETTCS
T ss_pred CCCcchhhhhccc-CCcEEEEEECCCCCCEEEEEeCC---CeEEEEECCCC
Confidence 6653222233322 23345688999 56666544433 35788888764
No 372
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.55 E-value=0.028 Score=58.75 Aligned_cols=188 Identities=11% Similarity=-0.002 Sum_probs=104.9
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEec--CCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAK--DGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~Wsp--Dg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.+....|+||+++|+-.. .+| .|.++|+++++.+.... ...+..+.|+| +|+.|+-...+ ..|...
T Consensus 156 ~v~~~~~~~~~~~l~t~s-~D~----~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D-----g~v~~w 225 (354)
T 2pbi_B 156 YLSACSFTNSDMQILTAS-GDG----TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD-----KKAMVW 225 (354)
T ss_dssp CEEEEEECSSSSEEEEEE-TTS----EEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT-----SCEEEE
T ss_pred cEEEEEEeCCCCEEEEEe-CCC----cEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC-----CeEEEE
Confidence 356788999999988653 444 49999999998654322 33456778877 45656544322 368888
Q ss_pred ECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC---c-eEEEEeecCCE
Q 004839 201 IIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG---L-AHCIVEHHEGF 276 (728)
Q Consensus 201 ~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~---~-~~~~~~~dg~~ 276 (728)
|+.+++. ...+.... .....+.++|||++|+..+.+. .|.+.|+... ....+..... . ....++++|..
T Consensus 226 d~~~~~~-~~~~~~h~-~~v~~v~~~p~~~~l~s~s~D~---~v~lwd~~~~--~~~~~~~~~~~~~~~~~~~~s~~g~~ 298 (354)
T 2pbi_B 226 DMRSGQC-VQAFETHE-SDVNSVRYYPSGDAFASGSDDA---TCRLYDLRAD--REVAIYSKESIIFGASSVDFSLSGRL 298 (354)
T ss_dssp ETTTCCE-EEEECCCS-SCEEEEEECTTSSEEEEEETTS---CEEEEETTTT--EEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred ECCCCcE-EEEecCCC-CCeEEEEEeCCCCEEEEEeCCC---eEEEEECCCC--cEEEEEcCCCcccceeEEEEeCCCCE
Confidence 9887652 22232222 2345688999999887655433 4778888762 2222222211 1 22345677776
Q ss_pred EEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEE
Q 004839 277 LYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRL 343 (728)
Q Consensus 277 l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l 343 (728)
|+..++.+ ..+|+ ++. . ......+ .. ....+..+.+.. +.+++....++.-+|
T Consensus 299 l~~g~~d~-------~i~vw--d~~-~--~~~~~~l-~~-h~~~v~~l~~spdg~~l~sgs~D~~v~v 352 (354)
T 2pbi_B 299 LFAGYNDY-------TINVW--DVL-K--GSRVSIL-FG-HENRVSTLRVSPDGTAFCSGSWDHTLRV 352 (354)
T ss_dssp EEEEETTS-------CEEEE--ETT-T--CSEEEEE-CC-CSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred EEEEECCC-------cEEEE--ECC-C--CceEEEE-EC-CCCcEEEEEECCCCCEEEEEcCCCCEEe
Confidence 66544322 23444 433 1 1112222 22 234566666654 344555555654333
No 373
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.55 E-value=0.0091 Score=61.49 Aligned_cols=111 Identities=13% Similarity=0.083 Sum_probs=73.6
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCc----eeccCc-cceeeeEEEecCCC-EEEEEEecCCCCcceeE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA----LCSKPQ-AVRVSNIAWAKDGQ-ALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~----~~~~~~-~~~~~~~~WspDg~-~l~y~~~~~~~~~~~v~ 198 (728)
.+..++|||||++|+... .+| .|+|+|+.+++ ...... ...+..++|+||++ .|+....+ ..|+
T Consensus 13 ~v~~~~~s~~~~~l~~~~-~d~----~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~ 82 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITS-WDG----SLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ-----GEIL 82 (342)
T ss_dssp CEEEEEEEGGGTEEEEEE-TTS----EEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT-----SCEE
T ss_pred cEEEEEEcCCCCEEEEEc-CCC----eEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCC-----CeEE
Confidence 467788999999998874 444 38999998877 332222 44678899999999 77666432 3688
Q ss_pred EEEC-CCCCceeEEeee-cCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 199 CSII-GSTDEDALLLEE-SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 199 ~~~l-~t~~~~~lv~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
.+++ .++.. ..+.. ........+.|+| ++.|+..+.+ ..|.+.|+.+
T Consensus 83 ~wd~~~~~~~--~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d---~~i~iwd~~~ 131 (342)
T 1yfq_A 83 KVDLIGSPSF--QALTNNEANLGICRICKYG-DDKLIAASWD---GLIEVIDPRN 131 (342)
T ss_dssp EECSSSSSSE--EECBSCCCCSCEEEEEEET-TTEEEEEETT---SEEEEECHHH
T ss_pred EEEeccCCce--EeccccCCCCceEEEEeCC-CCEEEEEcCC---CeEEEEcccc
Confidence 8898 76543 22222 0222345678999 8887765543 3577777653
No 374
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.55 E-value=0.011 Score=59.05 Aligned_cols=193 Identities=8% Similarity=-0.092 Sum_probs=105.2
Q ss_pred eceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCC
Q 004839 127 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGST 205 (728)
Q Consensus 127 ~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~ 205 (728)
.++.++||| + +|.+... .+...|.++|+++|+.+.... .........+.+|+.||.+. +....++.+|..+.
T Consensus 24 ~Gl~~~~dg-~-Lyvstg~-~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t----~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 24 QGLVYAEND-T-LFESTGL-YGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVV----WLKNIGFIYDRRTL 96 (266)
T ss_dssp EEEEECSTT-E-EEEEECS-TTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE----TTCSEEEEEETTTT
T ss_pred ccEEEeCCC-e-EEEECCC-CCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEE----ecCCEEEEEECCCC
Confidence 456689996 4 4544321 112469999999999776432 22223233444577787764 34568999999876
Q ss_pred C-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce----EEEEeecCCEEEEE
Q 004839 206 D-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA----HCIVEHHEGFLYLF 280 (728)
Q Consensus 206 ~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~----~~~~~~dg~~l~~~ 280 (728)
+ ..++.+. .... ..+++||+.|+++ + .++.|+++|.++.+ ....+.-...+. ...+.-.++++|.-
T Consensus 97 ~v~~~i~~g-~~~g----~glt~Dg~~l~vs-~--gs~~l~viD~~t~~-v~~~I~Vg~~~~p~~~~nele~~dg~lyvn 167 (266)
T 2iwa_A 97 SNIKNFTHQ-MKDG----WGLATDGKILYGS-D--GTSILYEIDPHTFK-LIKKHNVKYNGHRVIRLNELEYINGEVWAN 167 (266)
T ss_dssp EEEEEEECC-SSSC----CEEEECSSSEEEE-C--SSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cEEEEEECC-CCCe----EEEEECCCEEEEE-C--CCCeEEEEECCCCc-EEEEEEECCCCcccccceeEEEECCEEEEe
Confidence 5 2232222 1122 2467899998864 3 35789999998732 233333111110 01111124566643
Q ss_pred EcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeec------------CCCceEEEEEeeC--CEEEEEEecCCeeEEEEE
Q 004839 281 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFID------------DQGLVVEDVDFCK--THMALILREGRTYRLCSV 346 (728)
Q Consensus 281 tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~------------~~~~~i~~~~~~~--~~lv~~~~~~g~~~l~~~ 346 (728)
+... -.|.++|.+ . .+....+.- .....+.++.+.. +.+++.-.. .++|+.+
T Consensus 168 -~~~~-------~~V~vID~~-t---g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~--~~~v~~i 233 (266)
T 2iwa_A 168 -IWQT-------DCIARISAK-D---GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL--WPKLFEI 233 (266)
T ss_dssp -ETTS-------SEEEEEETT-T---CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT--CSEEEEE
T ss_pred -cCCC-------CeEEEEECC-C---CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC--CCeEEEE
Confidence 3322 258888876 2 222222211 1123567888774 466666443 3567777
Q ss_pred ecC
Q 004839 347 SLP 349 (728)
Q Consensus 347 ~l~ 349 (728)
++.
T Consensus 234 ~l~ 236 (266)
T 2iwa_A 234 KLH 236 (266)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 375
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.54 E-value=0.0036 Score=65.15 Aligned_cols=114 Identities=13% Similarity=0.094 Sum_probs=72.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCcee--ccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALC--SKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~--~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.+..+.|||||++||... .+|. |+++|+.+++.. .... ...+..++|+|||+.|+... +. .|...
T Consensus 172 ~i~~~~~~pdg~~lasg~-~dg~----i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~-----~v~iw 240 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYS-PDGI----LDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQ-----TVVCF 240 (343)
T ss_dssp CCCEEEECTTSCEEEEEC-TTSC----EEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SS-----BEEEE
T ss_pred ceEEEEECCCCCEEEEEc-CCCE----EEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CC-----eEEEE
Confidence 366788999999998763 4553 999999999865 2222 34678899999999887664 21 68888
Q ss_pred ECCCCCceeEEeeecCcceE---EEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 201 IIGSTDEDALLLEESNENVY---VNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 201 ~l~t~~~~~lv~~~~~~~~~---~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
|+.+......+..-...... ..+.|+|||++|+..+..+. .+.+++.+.
T Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~--~i~v~~~~~ 292 (343)
T 3lrv_A 241 DLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN--SLTIYKFDK 292 (343)
T ss_dssp ETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT--EEEEEEECT
T ss_pred EcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCC--cEEEEEEcc
Confidence 88766421111100000111 23789999999987665333 355555543
No 376
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.54 E-value=0.071 Score=52.98 Aligned_cols=186 Identities=8% Similarity=0.026 Sum_probs=110.4
Q ss_pred CCEEEEEEEcCCCcEEEEEEEECCCCceecc-----Cc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCc
Q 004839 135 HKFLAYTMYDKDNDYFTLSVRNLNSGALCSK-----PQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE 207 (728)
Q Consensus 135 G~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~-----~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~ 207 (728)
|.+|.|+.. ..|+.++++++..... .. ......++|.++++.||++.. ....|+++++.+...
T Consensus 1 ~~~l~~~~~------~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~----~~~~I~~~~~~g~~~ 70 (267)
T 1npe_A 1 GTHLLFAQT------GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI----SEPSIGRASLHGGEP 70 (267)
T ss_dssp CEEEEEEEE------EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET----TTTEEEEEESSSCCC
T ss_pred CcEEEEEcC------CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC----CCCEEEEEecCCCCc
Confidence 567777632 3589999987654321 01 124568999999989988743 235799999876543
Q ss_pred eeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC--CceEEEEeecCCEEEEEEcCCc
Q 004839 208 DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE--GLAHCIVEHHEGFLYLFTDAAK 285 (728)
Q Consensus 208 ~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~--~~~~~~~~~dg~~l~~~tn~~~ 285 (728)
..++ .. ....-.++.++++++.|++.... ...|+++++++. ..+.+.... ......++++++.||+......
T Consensus 71 ~~~~-~~-~~~~p~~ia~d~~~~~lyv~d~~--~~~I~~~~~~g~--~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~ 144 (267)
T 1npe_A 71 TTII-RQ-DLGSPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDGT--QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRD 144 (267)
T ss_dssp EEEE-CT-TCCCEEEEEEETTTTEEEEEETT--TTEEEEEETTSC--SCEEEECSSCSSEEEEEEETTTTEEEEEECCSS
T ss_pred EEEE-EC-CCCCccEEEEEecCCeEEEEECC--CCEEEEEEcCCC--CEEEEEECCCCCccEEEEeeCCCEEEEEECCCC
Confidence 3322 21 11123467889998888887653 357899998752 233333322 1123356677888888643211
Q ss_pred cCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecC
Q 004839 286 EGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLP 349 (728)
Q Consensus 286 ~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~ 349 (728)
+..|++++.+ . ...+.+.. ..-....++.+. ++.||+..... .+|.+++++
T Consensus 145 ------~~~I~~~~~d-g---~~~~~~~~-~~~~~P~gia~d~~~~~lyv~d~~~--~~I~~~~~~ 197 (267)
T 1npe_A 145 ------NPKIETSHMD-G---TNRRILAQ-DNLGLPNGLTFDAFSSQLCWVDAGT--HRAECLNPA 197 (267)
T ss_dssp ------SCEEEEEETT-S---CCCEEEEC-TTCSCEEEEEEETTTTEEEEEETTT--TEEEEEETT
T ss_pred ------CcEEEEEecC-C---CCcEEEEE-CCCCCCcEEEEcCCCCEEEEEECCC--CEEEEEecC
Confidence 2468887765 1 22233322 222346677776 46888876554 467888865
No 377
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.53 E-value=0.0091 Score=62.09 Aligned_cols=140 Identities=11% Similarity=0.072 Sum_probs=82.1
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++|+-. ..+| .|+++|+.+++...... ...+..++|+||++.|+-...+ ..|.+.++
T Consensus 78 ~V~~~~~~~~~~~l~s~-s~D~----~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~ 147 (343)
T 2xzm_R 78 FVSDLALSQENCFAISS-SWDK----TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE-----REIKLWNI 147 (343)
T ss_dssp CEEEEEECSSTTEEEEE-ETTS----EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT-----SCEEEEES
T ss_pred ceEEEEECCCCCEEEEE-cCCC----cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC-----CEEEEEec
Confidence 46778899999988755 3444 49999999997654322 3467889999999988655332 35667777
Q ss_pred CCCCceeEEee--ecCcceEEEEEEcCCC----------CEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce-EEE
Q 004839 203 GSTDEDALLLE--ESNENVYVNIRHTKDF----------HFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCI 269 (728)
Q Consensus 203 ~t~~~~~lv~~--~~~~~~~~~~~~SpDg----------~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~ 269 (728)
.... ..... .........+.++|++ .+|+..+.+ ..|.+.|... .....+......+ ...
T Consensus 148 ~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~iwd~~~--~~~~~~~~h~~~v~~~~ 220 (343)
T 2xzm_R 148 LGEC--KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD---GRLKVWNTNF--QIRYTFKAHESNVNHLS 220 (343)
T ss_dssp SSCE--EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT---SEEEEEETTT--EEEEEEECCSSCEEEEE
T ss_pred cCCc--eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC---CEEEEEcCCC--ceeEEEcCccccceEEE
Confidence 5321 11111 1122234567889887 455444432 3577777432 2222222222222 235
Q ss_pred EeecCCEEEEEE
Q 004839 270 VEHHEGFLYLFT 281 (728)
Q Consensus 270 ~~~dg~~l~~~t 281 (728)
++++|+.|+..+
T Consensus 221 ~s~~g~~l~sgs 232 (343)
T 2xzm_R 221 ISPNGKYIATGG 232 (343)
T ss_dssp ECTTSSEEEEEE
T ss_pred ECCCCCEEEEEc
Confidence 567877665544
No 378
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.53 E-value=0.027 Score=57.48 Aligned_cols=114 Identities=12% Similarity=0.091 Sum_probs=73.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCcee----cc-C-ccceeeeEEEec--CCCEEEEEEecCCCCcce
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALC----SK-P-QAVRVSNIAWAK--DGQALIYVVTDQNKRPYQ 196 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~----~~-~-~~~~~~~~~Wsp--Dg~~l~y~~~~~~~~~~~ 196 (728)
.+..++|||||++||... .+| .|+++|+.++... .. . ....+..++|+| |++.|+....+ ..
T Consensus 13 ~v~~~~~~~~~~~l~~~~-~dg----~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-----g~ 82 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCS-SDQ----HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-----KT 82 (351)
T ss_dssp CEEEEEECSSSSEEEEEE-TTS----EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-----SC
T ss_pred ceeEEEEcCCCCEEEEee-CCC----eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-----Ce
Confidence 577788999999998774 444 4899999876421 11 1 134678899999 68877665432 25
Q ss_pred eEEEECCCCCc-------e-eEEeeecCcceEEEEEEcCC--CCEEEEEEcCCCceEEEEEeCCCC
Q 004839 197 IYCSIIGSTDE-------D-ALLLEESNENVYVNIRHTKD--FHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 197 v~~~~l~t~~~-------~-~lv~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
|..+++.++.. . ...+... ......+.|+|+ +++|+..+.+ ..|++.|+.++
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d---g~v~iwd~~~~ 144 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDS-KGSLYSVKFAPAHLGLKLACLGND---GILRLYDALEP 144 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT---CEEEEEECSST
T ss_pred EEEEecCCCcccccccCcceeeeeccc-CCceeEEEEcCCCCCcEEEEecCC---CcEEEecCCCh
Confidence 67777765421 1 1122222 223457889999 9988766543 36888888764
No 379
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.52 E-value=0.0015 Score=69.59 Aligned_cols=200 Identities=11% Similarity=0.041 Sum_probs=106.8
Q ss_pred EeeceeeCCC-CCEEEEEEEcCCCcEEEEEEEECCCCc------eeccC-----ccceeeeEEEecCCCEEEEEEecCCC
Q 004839 125 YEELSEVSPD-HKFLAYTMYDKDNDYFTLSVRNLNSGA------LCSKP-----QAVRVSNIAWAKDGQALIYVVTDQNK 192 (728)
Q Consensus 125 ~~~~~~~SPD-G~~lA~~~~~~g~e~~~l~v~dl~tg~------~~~~~-----~~~~~~~~~WspDg~~l~y~~~~~~~ 192 (728)
.+..+.|||| +++|+-. ..+|. |+++|+.+++ ..... ....+..++|+||+..++++...
T Consensus 115 ~v~~~~~~~~~~~~l~s~-~~dg~----v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--- 186 (416)
T 2pm9_A 115 SVKTVKFNAKQDNVLASG-GNNGE----IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS--- 186 (416)
T ss_dssp CCCEEEECSSSTTBEEEE-CSSSC----EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS---
T ss_pred ceEEEEEcCCCCCEEEEE-cCCCe----EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC---
Confidence 4677889999 6766554 44554 9999999886 22211 13457789999995445555332
Q ss_pred CcceeEEEECCCCCceeEEeeecC-----cceEEEEEEcCCCC-EEEEEEcCCCceEEEEEeCCCCCCCeEEee-ecCCc
Q 004839 193 RPYQIYCSIIGSTDEDALLLEESN-----ENVYVNIRHTKDFH-FVCVHTFSTTSSKVFLINAADPFSGLTLIW-ECEGL 265 (728)
Q Consensus 193 ~~~~v~~~~l~t~~~~~lv~~~~~-----~~~~~~~~~SpDg~-~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~-~~~~~ 265 (728)
...|..+|+.++.. ...+.... ......+.|+|+|. .|+..........|+++|+.++......+. .....
T Consensus 187 -dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 264 (416)
T 2pm9_A 187 -SNFASIWDLKAKKE-VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG 264 (416)
T ss_dssp -SSCEEEEETTTTEE-EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC
T ss_pred -CCCEEEEECCCCCc-ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc
Confidence 34688889877642 22222211 22346789999985 444444433334688889877422223332 22222
Q ss_pred e-EEEEee-cCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCC--EEEEEEecCCee
Q 004839 266 A-HCIVEH-HEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKT--HMALILREGRTY 341 (728)
Q Consensus 266 ~-~~~~~~-dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~--~lv~~~~~~g~~ 341 (728)
+ ...+++ ++..|+.. ..++ .|...++. . ......+ .. ....+..+.+..+ .+++....++.
T Consensus 265 v~~~~~s~~~~~~l~s~-~~dg--------~v~~wd~~-~--~~~~~~~-~~-~~~~v~~~~~s~~~~~~l~s~~~d~~- 329 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSS-GRDN--------TVLLWNPE-S--AEQLSQF-PA-RGNWCFKTKFAPEAPDLFACASFDNK- 329 (416)
T ss_dssp EEEEEECSSCSSCEEEE-ESSS--------EEEEECSS-S--CCEEEEE-EC-SSSCCCCEEECTTCTTEEEECCSSSE-
T ss_pred eeEEEeCCCCCCeEEEE-eCCC--------CEEEeeCC-C--Cccceee-cC-CCCceEEEEECCCCCCEEEEEecCCc-
Confidence 2 234456 55544443 3332 24444544 1 1111222 22 1233445555543 46666666654
Q ss_pred EEEEEecCC
Q 004839 342 RLCSVSLPL 350 (728)
Q Consensus 342 ~l~~~~l~~ 350 (728)
|.++++..
T Consensus 330 -i~iw~~~~ 337 (416)
T 2pm9_A 330 -IEVQTLQN 337 (416)
T ss_dssp -EEEEESCC
T ss_pred -EEEEEccC
Confidence 55566543
No 380
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.50 E-value=0.0055 Score=68.96 Aligned_cols=196 Identities=8% Similarity=0.000 Sum_probs=109.3
Q ss_pred eeceeeCC--CCCEEEEEEEcCCCcEEEEEEEECCCC------c--eeccC--ccceeeeEEEecCCCEEEEEEecCCCC
Q 004839 126 EELSEVSP--DHKFLAYTMYDKDNDYFTLSVRNLNSG------A--LCSKP--QAVRVSNIAWAKDGQALIYVVTDQNKR 193 (728)
Q Consensus 126 ~~~~~~SP--DG~~lA~~~~~~g~e~~~l~v~dl~tg------~--~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~ 193 (728)
+..+.||| ||++||... .+| .|.|+|+.++ + ..... ....+..++|+|||+.|+....+. ..
T Consensus 67 v~~~~~sp~~~~~~l~s~~-~dg----~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-~~ 140 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGD-ESG----KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR-DN 140 (615)
T ss_dssp EEEEEECSSTTCCEEEEEE-TTS----EEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCS-SC
T ss_pred EEEEEECcCCCCCEEEEec-CCC----EEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCC-CC
Confidence 67788999 999998874 444 3899999766 2 22111 134678899999999888775432 22
Q ss_pred cceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEE-eeecCC---ce-EE
Q 004839 194 PYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTL-IWECEG---LA-HC 268 (728)
Q Consensus 194 ~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~-l~~~~~---~~-~~ 268 (728)
...|+..+. +. ....+... ......+.|+|++++++++...+ ..|.+.|+.+ .+... +..... .+ ..
T Consensus 141 ~~~v~~~d~--~~-~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d--~~v~vwd~~~--~~~~~~~~~~~~~~~~v~~~ 212 (615)
T 1pgu_A 141 FGVFISWDS--GN-SLGEVSGH-SQRINACHLKQSRPMRSMTVGDD--GSVVFYQGPP--FKFSASDRTHHKQGSFVRDV 212 (615)
T ss_dssp SEEEEETTT--CC-EEEECCSC-SSCEEEEEECSSSSCEEEEEETT--TEEEEEETTT--BEEEEEECSSSCTTCCEEEE
T ss_pred ccEEEEEEC--CC-cceeeecC-CccEEEEEECCCCCcEEEEEeCC--CcEEEEeCCC--cceeeeecccCCCCceEEEE
Confidence 346766663 22 12222222 22345688999999655555433 4677888876 33322 222222 22 23
Q ss_pred EEeec-CCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeec---CCCceEEEEEeeCCEEEEEEecCCeeEEE
Q 004839 269 IVEHH-EGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFID---DQGLVVEDVDFCKTHMALILREGRTYRLC 344 (728)
Q Consensus 269 ~~~~d-g~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~---~~~~~i~~~~~~~~~lv~~~~~~g~~~l~ 344 (728)
.++++ +..|+..+. ++ .|...++. . .+....+.. .....+..+.+.++.++++...++ .+.
T Consensus 213 ~~~~~~~~~l~~~~~-dg--------~i~vwd~~-~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~--~i~ 277 (615)
T 1pgu_A 213 EFSPDSGEFVITVGS-DR--------KISCFDGK-S---GEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADA--TIR 277 (615)
T ss_dssp EECSTTCCEEEEEET-TC--------CEEEEETT-T---CCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTS--EEE
T ss_pred EECCCCCCEEEEEeC-CC--------eEEEEECC-C---CCEeEEecccccccCCceEEEEEcCCCEEEEEcCCC--cEE
Confidence 45677 666655443 22 24444443 1 222222211 233456666665444555555555 456
Q ss_pred EEecCC
Q 004839 345 SVSLPL 350 (728)
Q Consensus 345 ~~~l~~ 350 (728)
++++.+
T Consensus 278 ~wd~~~ 283 (615)
T 1pgu_A 278 VWDVTT 283 (615)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 667654
No 381
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.49 E-value=0.0017 Score=70.39 Aligned_cols=199 Identities=6% Similarity=-0.041 Sum_probs=105.9
Q ss_pred EeeceeeCC-CCCEEEEEEEcCCCcEEEEEEEECCCCceeccC---c-cceeeeEEEec-CCCEEEEEEecCCCCcceeE
Q 004839 125 YEELSEVSP-DHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP---Q-AVRVSNIAWAK-DGQALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 125 ~~~~~~~SP-DG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~---~-~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~v~ 198 (728)
.+..++|+| +++.||.. ..+|. |+|+|+.+++..... . ...+..++|+| |++.|+ +... ...|.
T Consensus 121 ~V~~l~~~P~~~~~lasG-s~dg~----i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~-s~s~----D~~v~ 190 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVG-SKGGD----IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFY-ASSM----EGTTR 190 (435)
T ss_dssp CEEEEEECSSCTTCEEEE-ETTSC----EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEE-EECS----SSCEE
T ss_pred CEEEEEEeCCCCCEEEEE-eCCCE----EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEE-EEeC----CCEEE
Confidence 477889999 56677776 45665 999999987643321 1 34678899998 566554 4332 23577
Q ss_pred EEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE-EEEeecCCEE
Q 004839 199 CSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFL 277 (728)
Q Consensus 199 ~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~-~~~~~dg~~l 277 (728)
+.|+.+.....+............+.++|||++|+....+ ..|++.|+.+ .....+......+. ..+++++..+
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~i~~wd~~~--~~~~~~~~h~~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV---GNVILLNMDG--KELWNLRMHKKKVTHVALNPCCDWF 265 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS---SBEEEEESSS--CBCCCSBCCSSCEEEEEECTTCSSE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC---CcEeeeccCc--ceeEEEecccceEEeeeecCCCceE
Confidence 7788654322222111122223457899999988765443 3588888865 22222322222222 2445677666
Q ss_pred EEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecCC
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
++....++ ..+|+.+... . ....... .......+..+.+.. +..++....+|. |.++++..
T Consensus 266 ~~s~s~d~------~v~iwd~~~~-~-~~~~~~~--~~~h~~~v~~~~~spdg~~l~s~~~D~~--i~iwd~~~ 327 (435)
T 4e54_B 266 LATASVDQ------TVKIWDLRQV-R-GKASFLY--SLPHRHPVNAACFSPDGARLLTTDQKSE--IRVYSASQ 327 (435)
T ss_dssp EEEEETTS------BCCEEETTTC-C-SSSCCSB--CCBCSSCEEECCBCTTSSEEEEEESSSC--EEEEESSS
T ss_pred EEEecCcc------eeeEEecccc-c-ccceEEE--eeeccccccceeECCCCCeeEEEcCCCE--EEEEECCC
Confidence 65554443 2445543211 0 0111111 111223455665553 334455555554 55566554
No 382
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.49 E-value=0.024 Score=60.59 Aligned_cols=112 Identities=10% Similarity=0.013 Sum_probs=77.3
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++||-.. .+|. |.|+|+.+++.+.... ...+..+.|+||++.|+-... ...|...|+
T Consensus 152 ~V~~v~~~~~~~~l~sgs-~D~~----i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~-----D~~i~~wd~ 221 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCS-ADMT----IKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR-----DKTIKMWEV 221 (410)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSC----CCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEET-----TSEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEe-CCCe----EEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeC-----CCeEEEEEC
Confidence 467788999999887764 4554 8999999987655332 346788999999997765532 236888898
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
.++.. ...+.... .....+.+++||++|+..+.+. .|.+.|+.+
T Consensus 222 ~~~~~-~~~~~~h~-~~v~~~~~~~~g~~l~s~s~D~---~v~vwd~~~ 265 (410)
T 1vyh_C 222 QTGYC-VKTFTGHR-EWVRMVRPNQDGTLIASCSNDQ---TVRVWVVAT 265 (410)
T ss_dssp TTCCE-EEEEECCS-SCEEEEEECTTSSEEEEEETTS---CEEEEETTT
T ss_pred CCCcE-EEEEeCCC-ccEEEEEECCCCCEEEEEcCCC---eEEEEECCC
Confidence 87642 22232222 2345678999999887655533 477778776
No 383
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.47 E-value=0.015 Score=59.99 Aligned_cols=198 Identities=11% Similarity=0.030 Sum_probs=107.1
Q ss_pred EeeceeeCCC---CCEEEEEEEcCCCcEEEEEEEECCCCc-eeccC-c-cceeeeE------EEecCCCEEEEEEecCCC
Q 004839 125 YEELSEVSPD---HKFLAYTMYDKDNDYFTLSVRNLNSGA-LCSKP-Q-AVRVSNI------AWAKDGQALIYVVTDQNK 192 (728)
Q Consensus 125 ~~~~~~~SPD---G~~lA~~~~~~g~e~~~l~v~dl~tg~-~~~~~-~-~~~~~~~------~WspDg~~l~y~~~~~~~ 192 (728)
.+..+.|+|| |++|+... .+|. |+++|+.+++ ..... . ...+..+ +|+||++.|+....+
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~-~dg~----i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d--- 138 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGD-FGGN----LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD--- 138 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEE-TTSC----EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT---
T ss_pred cEEEEEEcCCCCCCceEEEec-CCCe----EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC---
Confidence 4667889999 68887764 5554 9999999887 33221 1 3345555 457899887765432
Q ss_pred CcceeEEEECCCCCceeEEeeecC---cceEEEEE----EcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCc
Q 004839 193 RPYQIYCSIIGSTDEDALLLEESN---ENVYVNIR----HTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL 265 (728)
Q Consensus 193 ~~~~v~~~~l~t~~~~~lv~~~~~---~~~~~~~~----~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~ 265 (728)
..|..+++.++......+.... ......+. ++|++++|+....+ ..|+++|+.+ ............
T Consensus 139 --~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d---~~i~i~d~~~--~~~~~~~~~~~~ 211 (357)
T 3i2n_A 139 --GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN---GDIKLFDLRN--MALRWETNIKNG 211 (357)
T ss_dssp --SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT---SEEEEEETTT--TEEEEEEECSSC
T ss_pred --CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC---CeEEEEECcc--CceeeecCCCCc
Confidence 3688888877642222222111 11222334 78999998776653 3689999987 333333333333
Q ss_pred e-EEEEee---cCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCC-E-EEEEEecCC
Q 004839 266 A-HCIVEH---HEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKT-H-MALILREGR 339 (728)
Q Consensus 266 ~-~~~~~~---dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~-~-lv~~~~~~g 339 (728)
+ ...+++ +++.|+..+..+ ..+++.+... .. ...+...........+..+.+..+ . +++....+|
T Consensus 212 v~~~~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~-~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 282 (357)
T 3i2n_A 212 VCSLEFDRKDISMNKLVATSLEG-------KFHVFDMRTQ-HP-TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG 282 (357)
T ss_dssp EEEEEESCSSSSCCEEEEEESTT-------EEEEEEEEEE-ET-TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred eEEEEcCCCCCCCCEEEEECCCC-------eEEEEeCcCC-Cc-ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC
Confidence 2 234455 667666554322 2344443321 00 011111111123445777777764 3 677777777
Q ss_pred eeEEEEE
Q 004839 340 TYRLCSV 346 (728)
Q Consensus 340 ~~~l~~~ 346 (728)
.-.++-+
T Consensus 283 ~i~iwd~ 289 (357)
T 3i2n_A 283 GLHLWKY 289 (357)
T ss_dssp EEEEEEE
T ss_pred cEEEeec
Confidence 5554444
No 384
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.46 E-value=0.017 Score=64.56 Aligned_cols=188 Identities=15% Similarity=0.092 Sum_probs=105.4
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceec-cCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS-KPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~-~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.+||||++||... .+| .|.++|.. ++.+. ... ...+..++|+|||+.|+....+ ..|.+++.
T Consensus 346 ~v~~~~~s~~g~~l~~~~-~dg----~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d-----~~v~~~~~ 414 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASAS-DDK----TVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDD-----KTVKLWNR 414 (577)
T ss_dssp CEEEEEECTTSSEEEEEE-TTS----EEEEEETT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETT-----SEEEEECT
T ss_pred CEEEEEECCCCCEEEEEe-CCC----EEEEEcCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCC-----CEEEEEeC
Confidence 455678999999998874 444 38888965 44332 222 3457789999999988765432 25666675
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE-EEEeecCCEEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFLYLFT 281 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~t 281 (728)
.. +. ...+.... .....+.++||+++|+..+.+ ..|.+.|+.. .....+......+. ..++++++.|+..+
T Consensus 415 ~~-~~-~~~~~~~~-~~v~~~~~s~d~~~l~~~~~d---~~v~~w~~~~--~~~~~~~~~~~~v~~~~~spd~~~las~~ 486 (577)
T 2ymu_A 415 NG-QL-LQTLTGHS-SSVWGVAFSPDDQTIASASDD---KTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQTIASAS 486 (577)
T ss_dssp TC-CE-EEEEECCS-SCEEEEEECTTSSEEEEEETT---SEEEEEETTS--CEEEEEECCSSCEEEEEECTTSCEEEEEE
T ss_pred CC-CE-EEEecCCC-CCeEEEEECCCCCEEEEEcCC---CEEEEEECCC--CEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 32 21 11122222 234567899999998766553 3577778754 23344443333332 35567777665543
Q ss_pred cCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEec
Q 004839 282 DAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSL 348 (728)
Q Consensus 282 n~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l 348 (728)
. ++ ..+|+ +.. ....+.+. . ....+..+.+.. +.+++....+|. |++++.
T Consensus 487 ~-d~------~i~iw--~~~----~~~~~~~~-~-h~~~v~~l~~s~dg~~l~s~~~dg~--v~lwd~ 537 (577)
T 2ymu_A 487 D-DK------TVKLW--NRN----GQLLQTLT-G-HSSSVRGVAFSPDGQTIASASDDKT--VKLWNR 537 (577)
T ss_dssp T-TS------EEEEE--ETT----SCEEEEEE-C-CSSCEEEEEECTTSSCEEEEETTSE--EEEECT
T ss_pred C-CC------EEEEE--cCC----CCEEEEEe-C-CCCCEEEEEEcCCCCEEEEEECcCE--EEEEeC
Confidence 3 22 23444 332 11122222 2 234466666654 345555566664 555664
No 385
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.45 E-value=0.086 Score=53.27 Aligned_cols=198 Identities=11% Similarity=0.041 Sum_probs=105.3
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCc--eec-cCc-cceeeeEEEecC--CCEEEEEEecCCCCcceeE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA--LCS-KPQ-AVRVSNIAWAKD--GQALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~--~~~-~~~-~~~~~~~~WspD--g~~l~y~~~~~~~~~~~v~ 198 (728)
.+..++|||||++||-.. .++. |+|+|++++. .+. +.. ...+..++|+++ |+.|+-...| ..|.
T Consensus 11 ~V~~~~~s~~g~~las~s-~D~~----v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-----~~v~ 80 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCS-SDKT----IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVM 80 (297)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSC----EEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----TEEE
T ss_pred ceEEEEECCCCCEEEEEe-CCCE----EEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-----CEEE
Confidence 466778999999998774 4554 8999997643 221 111 346778999874 7766544322 3577
Q ss_pred EEECCCCC-ceeEEeeecCcceEEEEEEcCC--CCEEEEEEcCCCceEEEEEeCCCCCC-CeEEeeecCCceE-EEEeec
Q 004839 199 CSIIGSTD-EDALLLEESNENVYVNIRHTKD--FHFVCVHTFSTTSSKVFLINAADPFS-GLTLIWECEGLAH-CIVEHH 273 (728)
Q Consensus 199 ~~~l~t~~-~~~lv~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~l~~~dl~~~~~-~~~~l~~~~~~~~-~~~~~d 273 (728)
+.++.++. .....+.... .....+.|+|+ |++|+..+.+ ..|.+.|+.++.. ....+......+. ..++++
T Consensus 81 iWd~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~g~~l~s~s~d---~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHS-ASVNSVQWAPHEYGPMLLVASSD---GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp EEEBSSSCBCCCEEECCCS-SCEEEEEECCGGGCSEEEEEETT---SEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred EEEcCCCceEEEEEeecCC-CceeEEEeCcCCCCcEEEEEECC---CcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 77877653 2222222222 23456889998 7877655543 3577778765321 1222222222222 233343
Q ss_pred C------------CEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEe-ecCCCceEEEEEeeCC----EEEEEEe
Q 004839 274 E------------GFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVF-IDDQGLVVEDVDFCKT----HMALILR 336 (728)
Q Consensus 274 g------------~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li-~~~~~~~i~~~~~~~~----~lv~~~~ 336 (728)
+ +.+++....++ ..+|+.+.-. ...+..+. .......+..+.+..+ .+++...
T Consensus 157 ~~~~~~~~~~~~~~~~l~sgs~D~------~v~lwd~~~~----~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSD----AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp C------------CCEEEEEETTS------CEEEEEEETT----TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred cccccccCCCCCCcceEEEEcCCC------cEEEEEEcCC----CceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE
Confidence 1 22333333332 2556655422 11222111 1122345677777653 6777777
Q ss_pred cCCeeEEEEE
Q 004839 337 EGRTYRLCSV 346 (728)
Q Consensus 337 ~~g~~~l~~~ 346 (728)
.++.-+|+-+
T Consensus 227 ~D~~v~iWd~ 236 (297)
T 2pm7_B 227 QDRTCIIWTQ 236 (297)
T ss_dssp TTSCEEEEEE
T ss_pred CCCcEEEEEe
Confidence 7776555544
No 386
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.45 E-value=0.0049 Score=76.22 Aligned_cols=192 Identities=13% Similarity=0.090 Sum_probs=112.1
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
+..+.+||||++++... .+|. |+++|+.+++...... ...+..++|+|||+.|+.... ...|...++.
T Consensus 964 i~~~~~sp~g~~l~~g~-~~g~----i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~-----dg~i~vwd~~ 1033 (1249)
T 3sfz_A 964 VSCCCLSPHLEYVAFGD-EDGA----IKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSE-----DSVIQVWNWQ 1033 (1249)
T ss_dssp EEEEEECTTSSEEEEEE-TTSC----CEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECS-----SSBEEEEETT
T ss_pred EEEEEEcCCCCEEEEEc-CCCC----EEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcC-----CCEEEEEECC
Confidence 56678999999999885 5554 8999999987655332 346788999999998876532 2368888887
Q ss_pred CCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCc-eEEEEeecCCEEEEEEc
Q 004839 204 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL-AHCIVEHHEGFLYLFTD 282 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~-~~~~~~~dg~~l~~~tn 282 (728)
++... ... ........+.+++|++.+.. +. ...++++|+.++. ....+...... ....+++++..|+..+.
T Consensus 1034 ~~~~~--~~~-~~~~~v~~~~~~~~~~l~~~-~~---dg~v~vwd~~~~~-~~~~~~~~~~~v~~~~~s~d~~~l~s~s~ 1105 (1249)
T 3sfz_A 1034 TGDYV--FLQ-AHQETVKDFRLLQDSRLLSW-SF---DGTVKVWNVITGR-IERDFTCHQGTVLSCAISSDATKFSSTSA 1105 (1249)
T ss_dssp TTEEE--CCB-CCSSCEEEEEECSSSEEEEE-ES---SSEEEEEETTTTC-CCEEEECCSSCCCCEEECSSSSSCEEECC
T ss_pred CCceE--EEe-cCCCcEEEEEEcCCCcEEEE-EC---CCcEEEEECCCCc-eeEEEcccCCcEEEEEECCCCCEEEEEcC
Confidence 76321 111 22223456789998875433 22 2368889998743 23333332222 23456677776655433
Q ss_pred CCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecCCC
Q 004839 283 AAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 283 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
++ ..+++.+... .....+. . ....+..+.+.. +.++++...+|. |.++++.++
T Consensus 1106 -d~------~v~iwd~~~~-----~~~~~l~-~-h~~~v~~~~~s~dg~~lat~~~dg~--i~vwd~~~~ 1159 (1249)
T 3sfz_A 1106 -DK------TAKIWSFDLL-----SPLHELK-G-HNGCVRCSAFSLDGILLATGDDNGE--IRIWNVSDG 1159 (1249)
T ss_dssp -SS------CCCEECSSSS-----SCSBCCC-C-CSSCEEEEEECSSSSEEEEEETTSC--CCEEESSSS
T ss_pred -CC------cEEEEECCCc-----ceeeeec-c-CCCcEEEEEECCCCCEEEEEeCCCE--EEEEECCCC
Confidence 22 2345543321 1112221 1 223466666654 345556666665 555666554
No 387
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.45 E-value=0.0078 Score=69.43 Aligned_cols=194 Identities=13% Similarity=0.053 Sum_probs=104.9
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++|+-.. .+| .|+|+|+.+++...... ...+..++|+||++.|+-...+ ..|.+.++
T Consensus 432 ~v~~v~~s~~g~~l~sgs-~Dg----~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~ 501 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGS-WDG----ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD-----RTIKLWNT 501 (694)
T ss_dssp CEEEEEECTTSSEEEEEE-TTS----EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECT
T ss_pred cEEEEEECCCCCEEEEEe-CCC----cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC-----CEEEEEEC
Confidence 466788999999998664 444 49999999987554322 4467889999999987665433 24666665
Q ss_pred CCCCceeEEeee--cCcceEEEEEEcCCCC-EEEEEEcCCCceEEEEEeCCCCCCCeEEeeec-CCce-EEEEeecCCEE
Q 004839 203 GSTDEDALLLEE--SNENVYVNIRHTKDFH-FVCVHTFSTTSSKVFLINAADPFSGLTLIWEC-EGLA-HCIVEHHEGFL 277 (728)
Q Consensus 203 ~t~~~~~lv~~~--~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~-~~~~-~~~~~~dg~~l 277 (728)
..... ..+... ........+.++|++. .++++...+ ..|.+.|+.+ ......... ...+ ...++++++.|
T Consensus 502 ~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d--~~v~vwd~~~--~~~~~~~~~h~~~v~~v~~spdg~~l 576 (694)
T 3dm0_A 502 LGECK-YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD--KTVKVWNLSN--CKLRSTLAGHTGYVSTVAVSPDGSLC 576 (694)
T ss_dssp TSCEE-EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT--SCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCCcc-eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC--CeEEEEECCC--CcEEEEEcCCCCCEEEEEEeCCCCEE
Confidence 43221 112111 1122345678999984 233333332 3477888876 333333222 2222 23456777765
Q ss_pred EEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCC
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
+..+. ++ ..+|+. +. . -+.+..-.....+..+.+..+..++....++ .+.++++.+
T Consensus 577 ~sg~~-Dg------~i~iwd--~~-~-----~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~--~i~iwd~~~ 632 (694)
T 3dm0_A 577 ASGGK-DG------VVLLWD--LA-E-----GKKLYSLEANSVIHALCFSPNRYWLCAATEH--GIKIWDLES 632 (694)
T ss_dssp EEEET-TS------BCEEEE--TT-T-----TEEEECCBCSSCEEEEEECSSSSEEEEEETT--EEEEEETTT
T ss_pred EEEeC-CC------eEEEEE--CC-C-----CceEEEecCCCcEEEEEEcCCCcEEEEEcCC--CEEEEECCC
Confidence 54433 22 234444 33 1 1222211223345666666543333333332 277777654
No 388
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.44 E-value=0.061 Score=55.29 Aligned_cols=199 Identities=8% Similarity=-0.015 Sum_probs=118.0
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCC----CceeccC--ccceeeeEEEecCCCEEEEEEecCCCCcceeEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS----GALCSKP--QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 199 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~t----g~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~ 199 (728)
...+.|+++++.|.++ |..+. .|+.+++++ .....+. .......+++.+.++.||++.. ....|.+
T Consensus 32 p~g~~~d~~~~~ly~~-D~~~~---~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~----~~~~I~~ 103 (316)
T 1ijq_A 32 VVALDTEVASNRIYWS-DLSQR---MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----VLGTVSV 103 (316)
T ss_dssp EEEEEEETTTTEEEEE-ETTTT---EEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET----TTTEEEE
T ss_pred eEEEEEEeCCCEEEEE-ECCCC---cEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEEC----CCCEEEE
Confidence 3456789998888776 65543 488999887 2221111 1224567888877888988742 2347888
Q ss_pred EECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-C-ceEEEEeecCCEE
Q 004839 200 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-G-LAHCIVEHHEGFL 277 (728)
Q Consensus 200 ~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~-~~~~~~~~dg~~l 277 (728)
.++.......++ .. ......++.+.|++.+|+++... ....|+++++++ ...+.+.... . .....++++++.|
T Consensus 104 ~~~~g~~~~~~~-~~-~~~~P~~iavdp~~g~ly~~d~~-~~~~I~~~~~dG--~~~~~~~~~~~~~P~gla~d~~~~~l 178 (316)
T 1ijq_A 104 ADTKGVKRKTLF-RE-NGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRL 178 (316)
T ss_dssp EETTSSSEEEEE-EC-TTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTS--CCEEEEECSSCSCEEEEEEETTTTEE
T ss_pred EeCCCCceEEEE-EC-CCCCcceEEeCCCCCEEEEEccC-CCCeEEEEcCCC--CCeEEEEECCCCCceEEEEeccCCEE
Confidence 888654333333 21 11223467889988888887643 235799999875 2333343221 1 1233567788899
Q ss_pred EEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecC-CCceEEEEEeeCCEEEEEEecCCeeEEEEEecCCC
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDD-QGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~-~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
|+..... .+|.+++.+ . ...+.++... ......++.++++.||+....+ .+|.+++..++
T Consensus 179 Y~~D~~~--------~~I~~~d~d-g---~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~--~~V~~~~~~~g 239 (316)
T 1ijq_A 179 YWVDSKL--------HSISSIDVN-G---GNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN--EAIFSANRLTG 239 (316)
T ss_dssp EEEETTT--------TEEEEEETT-S---CSCEEEEECTTTTSSEEEEEEETTEEEEEETTT--TEEEEEETTTC
T ss_pred EEEECCC--------CeEEEEecC-C---CceEEEeecCCccCCcEEEEEECCEEEEEECCC--CeEEEEeCCCC
Confidence 8864332 468888876 2 2234444321 1234668888888988877443 46777875443
No 389
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.43 E-value=0.0037 Score=67.58 Aligned_cols=115 Identities=10% Similarity=0.021 Sum_probs=74.9
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 204 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t 204 (728)
+..+.|||||++|+... .+|. |+++|+.+........ ...+..++|+|+++.++.+...+ ..|.+.|+.+
T Consensus 212 ~~~~~~~~~~~~l~~g~-~dg~----i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d----~~v~iwd~~~ 282 (435)
T 4e54_B 212 FCSLDVSASSRMVVTGD-NVGN----VILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVD----QTVKIWDLRQ 282 (435)
T ss_dssp CCCEEEETTTTEEEEEC-SSSB----EEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT----SBCCEEETTT
T ss_pred EEEEEECCCCCEEEEEe-CCCc----EeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCc----ceeeEEeccc
Confidence 45678999999998763 4453 8999998655443332 44678899999998777765432 2466677766
Q ss_pred CC-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCC
Q 004839 205 TD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 205 ~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
.. ...++...........+.|||||++|+..+.+ ..|.+.|+.++
T Consensus 283 ~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D---~~i~iwd~~~~ 328 (435)
T 4e54_B 283 VRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQK---SEIRVYSASQW 328 (435)
T ss_dssp CCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESS---SCEEEEESSSS
T ss_pred ccccceEEEeeeccccccceeECCCCCeeEEEcCC---CEEEEEECCCC
Confidence 53 22222211122223567899999998766543 35788888764
No 390
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.42 E-value=0.015 Score=61.35 Aligned_cols=143 Identities=9% Similarity=0.029 Sum_probs=85.5
Q ss_pred EeeceeeCC-CCCEEEEEEEcCCCcEEEEEEEECCCCceeccC---------------ccceeeeEEEec-CCCEEEEEE
Q 004839 125 YEELSEVSP-DHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP---------------QAVRVSNIAWAK-DGQALIYVV 187 (728)
Q Consensus 125 ~~~~~~~SP-DG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~---------------~~~~~~~~~Wsp-Dg~~l~y~~ 187 (728)
.+..+.||| ||++||... .+|. |.++|+.+++..... ....+..++|+| +++.|+..
T Consensus 45 ~v~~~~~s~~~~~~l~~~~-~dg~----i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~- 118 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGG-SDGV----IVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS- 118 (408)
T ss_dssp CEEEEEECTTTCCEEEEEE-TTSC----EEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE-
T ss_pred cEEEEEEecCCCCEEEEEc-CCCe----EEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE-
Confidence 577788999 999998874 4554 999999998654321 234678899999 55545443
Q ss_pred ecCCCCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCC---CCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC
Q 004839 188 TDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKD---FHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG 264 (728)
Q Consensus 188 ~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpD---g~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~ 264 (728)
.. ...|..+++.++... ..+.... ....+.++++ +++|+....+ ..|+++|+.++. ....+.....
T Consensus 119 ~~----d~~i~iwd~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~d~~~~~-~~~~~~~~~~ 187 (408)
T 4a11_B 119 SF----DKTLKVWDTNTLQTA-DVFNFEE--TVYSHHMSPVSTKHCLVAVGTRG---PKVQLCDLKSGS-CSHILQGHRQ 187 (408)
T ss_dssp ET----TSEEEEEETTTTEEE-EEEECSS--CEEEEEECSSCSSCCEEEEEESS---SSEEEEESSSSC-CCEEECCCCS
T ss_pred eC----CCeEEEeeCCCCccc-eeccCCC--ceeeeEeecCCCCCcEEEEEcCC---CeEEEEeCCCcc-eeeeecCCCC
Confidence 32 236888898876422 2222222 2234566764 4476665543 358888987742 2333333333
Q ss_pred ce-EEEEeecCCEEEEEEcCC
Q 004839 265 LA-HCIVEHHEGFLYLFTDAA 284 (728)
Q Consensus 265 ~~-~~~~~~dg~~l~~~tn~~ 284 (728)
.+ ...+++++..+++....+
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~d 208 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASAD 208 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETT
T ss_pred cEEEEEECCCCCcEEEEEcCC
Confidence 32 234567777655555544
No 391
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.42 E-value=0.1 Score=53.89 Aligned_cols=138 Identities=7% Similarity=-0.033 Sum_probs=78.6
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccC----ccceeeeEEEecCC----------CEEEEEEecC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP----QAVRVSNIAWAKDG----------QALIYVVTDQ 190 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~----~~~~~~~~~WspDg----------~~l~y~~~~~ 190 (728)
.+..+.|||||++|+-.. .+|. |+++|+.+....... ....+..+.|+|++ ..|+-. ..
T Consensus 120 ~v~~v~~sp~~~~l~s~~-~d~~----i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~-~~- 192 (343)
T 2xzm_R 120 EVYSVAFSPDNRQILSAG-AERE----IKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASV-GW- 192 (343)
T ss_dssp CEEEEEECSSTTEEEEEE-TTSC----EEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEE-ET-
T ss_pred cEEEEEECCCCCEEEEEc-CCCE----EEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEE-cC-
Confidence 466789999999997664 4554 899999854433222 12356788999997 344333 32
Q ss_pred CCCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEE
Q 004839 191 NKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIV 270 (728)
Q Consensus 191 ~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~ 270 (728)
...|...+... .....+.... .....+.|+|||++|+..+.+ ..|.+.|+.........+.....-....+
T Consensus 193 ---d~~i~iwd~~~--~~~~~~~~h~-~~v~~~~~s~~g~~l~sgs~d---g~v~iwd~~~~~~~~~~~~~~~~v~~v~~ 263 (343)
T 2xzm_R 193 ---DGRLKVWNTNF--QIRYTFKAHE-SNVNHLSISPNGKYIATGGKD---KKLLIWDILNLTYPQREFDAGSTINQIAF 263 (343)
T ss_dssp ---TSEEEEEETTT--EEEEEEECCS-SCEEEEEECTTSSEEEEEETT---CEEEEEESSCCSSCSEEEECSSCEEEEEE
T ss_pred ---CCEEEEEcCCC--ceeEEEcCcc-ccceEEEECCCCCEEEEEcCC---CeEEEEECCCCcccceeecCCCcEEEEEE
Confidence 23566667422 1222222222 234568999999998765543 36888888442222233222222223345
Q ss_pred eecCCEEE
Q 004839 271 EHHEGFLY 278 (728)
Q Consensus 271 ~~dg~~l~ 278 (728)
++++..+.
T Consensus 264 sp~~~~la 271 (343)
T 2xzm_R 264 NPKLQWVA 271 (343)
T ss_dssp CSSSCEEE
T ss_pred CCCCCEEE
Confidence 66665444
No 392
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.42 E-value=0.023 Score=59.79 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=74.0
Q ss_pred EeeceeeCC-CCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCC---EEEEEEecCCCCcceeEE
Q 004839 125 YEELSEVSP-DHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQ---ALIYVVTDQNKRPYQIYC 199 (728)
Q Consensus 125 ~~~~~~~SP-DG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~---~l~y~~~~~~~~~~~v~~ 199 (728)
.+..+.|+| ++++|+.. ..+| .|+++|+.+++...... ......+.|+|++. .|+.... ...|..
T Consensus 101 ~v~~~~~~~~~~~~l~s~-~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~ 170 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSS-SFDK----TLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTR-----GPKVQL 170 (408)
T ss_dssp CEEEEEECTTCTTCEEEE-ETTS----EEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEES-----SSSEEE
T ss_pred cEEEEEEccCCCcEEEEE-eCCC----eEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcC-----CCeEEE
Confidence 577888999 66666655 4455 49999999988665433 44567888988554 5555432 236888
Q ss_pred EECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCC
Q 004839 200 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 200 ~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
+++.++.... .+.... .....+.|+|++++++++...+ ..|.+.|+...
T Consensus 171 ~d~~~~~~~~-~~~~~~-~~v~~~~~~~~~~~ll~~~~~d--g~i~i~d~~~~ 219 (408)
T 4a11_B 171 CDLKSGSCSH-ILQGHR-QEILAVSWSPRYDYILATASAD--SRVKLWDVRRA 219 (408)
T ss_dssp EESSSSCCCE-EECCCC-SCEEEEEECSSCTTEEEEEETT--SCEEEEETTCS
T ss_pred EeCCCcceee-eecCCC-CcEEEEEECCCCCcEEEEEcCC--CcEEEEECCCC
Confidence 8987764222 222222 2345688999999766655433 34778888664
No 393
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=97.41 E-value=0.00074 Score=73.89 Aligned_cols=113 Identities=19% Similarity=0.170 Sum_probs=74.5
Q ss_pred CccEEEEEcCCCCCCcCcccH--HHHHHHHH-CCeEEEEEcCCCCCCCCCccccccc------cCCCCCcHHHHHHHHHH
Q 004839 495 QNPGLLHGHGAYGELLDKRWR--SELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGR------RTKKLNSIKDFISCARF 565 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~--~~~~~l~~-~Gy~v~~~d~RG~g~~G~~~~~~~~------~~~~~~~~~D~~~~~~~ 565 (728)
..|++|++-|. +. ...... .....||+ .|-.+++...|-.|.+-. +-.... -..-...+.|+...+++
T Consensus 42 ~gPIfl~~gGE-g~-~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P-~~~~st~~~nL~yLt~eQALaD~a~fi~~ 118 (472)
T 4ebb_A 42 EGPIFFYTGNE-GD-VWAFANNSAFVAELAAERGALLVFAEHRYYGKSLP-FGAQSTQRGHTELLTVEQALADFAELLRA 118 (472)
T ss_dssp TCCEEEEECCS-SC-HHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCT-TGGGGGSTTSCTTCSHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCC-cc-ccccccCccHHHHHHHHhCCeEEEEecccccCCcC-CCCCCccccccccCCHHHHHHHHHHHHHH
Confidence 36888887542 21 111111 12334454 699999999998776521 111111 11123357788888888
Q ss_pred HHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 004839 566 LIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 610 (728)
Q Consensus 566 l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~~f~a~v~~~p~~ 610 (728)
+...--....++.++|+||||.+++|+-.++|++|.|+++.++++
T Consensus 119 ~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 119 LRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp HHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 766533445789999999999999999999999999999887644
No 394
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.40 E-value=0.0097 Score=62.81 Aligned_cols=115 Identities=9% Similarity=0.103 Sum_probs=77.9
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccC-c-------cceeeeEEEecCCCEEEEEEecCCCCcce
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP-Q-------AVRVSNIAWAKDGQALIYVVTDQNKRPYQ 196 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~-~-------~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 196 (728)
.+..+.|+||| +|+.. ..+| .|+++|+.+++.+... . ...+..++|+||++.|+....+ .....
T Consensus 188 ~i~~~~~~~~~-~l~~~-~~dg----~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d--~~~g~ 259 (397)
T 1sq9_A 188 FATSVDISERG-LIATG-FNNG----TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS--NSFGC 259 (397)
T ss_dssp CCCEEEECTTS-EEEEE-CTTS----EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEE--TTEEE
T ss_pred CceEEEECCCc-eEEEE-eCCC----cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecC--CCCce
Confidence 36678999999 76665 3444 4999999998755432 1 3457789999999988776543 11247
Q ss_pred eEEEECCCCCceeEEeeec------------CcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 197 IYCSIIGSTDEDALLLEES------------NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 197 v~~~~l~t~~~~~lv~~~~------------~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
|.++|+.+++. ...+... .......+.|+|||++|+..+.+ ..|+++|+.+
T Consensus 260 i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~ 322 (397)
T 1sq9_A 260 ITLYETEFGER-IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD---GKLRFWDVKT 322 (397)
T ss_dssp EEEEETTTCCE-EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT---SEEEEEETTT
T ss_pred EEEEECCCCcc-cceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC---CeEEEEEcCC
Confidence 88999887642 2222220 22334578999999998766543 4688999977
No 395
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.39 E-value=0.029 Score=60.10 Aligned_cols=197 Identities=10% Similarity=0.014 Sum_probs=103.5
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceee------------------------------
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVS------------------------------ 172 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~------------------------------ 172 (728)
.+..++|||||++||... .+|. |.|+|+++++.+.... ...+.
T Consensus 149 ~V~sv~fspdg~~lasgs-~Dg~----v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~ 223 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGT-SSAE----VQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHV 223 (420)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSC----EEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred cEEEEEECCCCCEEEEEE-CCCe----EEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceee
Confidence 477889999999998874 4554 8999999887543211 11122
Q ss_pred -----------eEEEecCCCEEEEEEecCCCCcceeEEEECCCCCc---eeEEeeecCcceEEEEEEcCCCCEEEEEEcC
Q 004839 173 -----------NIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE---DALLLEESNENVYVNIRHTKDFHFVCVHTFS 238 (728)
Q Consensus 173 -----------~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~---~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~ 238 (728)
.+.|+|+|+.|+....+ ..+.+.++.++.. ....... .......+.|+|++..++.....
T Consensus 224 ~~~~~h~~~~~~~~~~~~g~~l~s~~~D-----~~v~i~~~~~~~~~~~~~~~~~~-~~~~V~~~~~~p~~~~~la~~~g 297 (420)
T 4gga_A 224 ATLSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFTQ-HQGAVKAVAWCPWQSNVLATGGG 297 (420)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCCSSCSCCSEEECC-CSSCEEEEEECTTCTTEEEEEEC
T ss_pred EEecccccceeeeeecCCCCeeeeeecc-----ccceEEeeccccccceeeeeecc-cCCceeeeeeCCCcccEEEEEee
Confidence 23344444433332211 2344455544321 0111111 11223457889988877766554
Q ss_pred CCceEEEEEeCCCCCCCeEE-eeecCCceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCC
Q 004839 239 TTSSKVFLINAADPFSGLTL-IWECEGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQ 317 (728)
Q Consensus 239 ~~~~~l~~~dl~~~~~~~~~-l~~~~~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~ 317 (728)
.....|.+.|+.++ .... +..........+.++++.++..+.... ..|...+.. . ......+ .. .
T Consensus 298 s~D~~I~iwd~~t~--~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d-------~~I~iwd~~-~--~~~v~~l-~g-H 363 (420)
T 4gga_A 298 TSDRHIRIWNVCSG--ACLSAVDAHSQVCSILWSPHYKELISGHGFAQ-------NQLVIWKYP-T--MAKVAEL-KG-H 363 (420)
T ss_dssp TTTCEEEEEETTTT--EEEEEEECSSCEEEEEEETTTTEEEEEECTTT-------CCEEEEETT-T--CCEEEEE-CC-C
T ss_pred cCCCEEEEEeCCcc--ccceeeccccceeeeeecCCCCeEEEEEecCC-------CEEEEEECC-C--CcEEEEE-cC-C
Confidence 44567888899873 3322 322233334455678888777654322 224444443 1 1222222 22 2
Q ss_pred CceEEEEEeeC-CEEEEEEecCCeeEEEEEec
Q 004839 318 GLVVEDVDFCK-THMALILREGRTYRLCSVSL 348 (728)
Q Consensus 318 ~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l 348 (728)
...+..+.+.. +.+++....++.- ++.++
T Consensus 364 ~~~V~~l~~spdg~~l~S~s~D~tv--riWdv 393 (420)
T 4gga_A 364 TSRVLSLTMSPDGATVASAAADETL--RLWRC 393 (420)
T ss_dssp SSCEEEEEECTTSSCEEEEETTTEE--EEECC
T ss_pred CCCEEEEEEcCCCCEEEEEecCCeE--EEEEC
Confidence 34567777764 4556666667654 44444
No 396
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.39 E-value=0.009 Score=60.86 Aligned_cols=150 Identities=10% Similarity=0.098 Sum_probs=86.0
Q ss_pred EeeceeeCCCCCEEEEEEEcCC------CcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCccee
Q 004839 125 YEELSEVSPDHKFLAYTMYDKD------NDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQI 197 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g------~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v 197 (728)
....+.++|||+..+-...... .....||.+|.+ |+...... ......++|+|||+.||++... ..+|
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~----~~~i 173 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSL----SYSV 173 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGG----GTEE
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCC----CCcE
Confidence 5667889999994433322110 123568888876 44332211 2244679999999999887432 3478
Q ss_pred EEEECC--CCC-c-eeEEeeec-CcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCe-EEeeecCC-ceEEEE
Q 004839 198 YCSIIG--STD-E-DALLLEES-NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL-TLIWECEG-LAHCIV 270 (728)
Q Consensus 198 ~~~~l~--t~~-~-~~lv~~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~-~~l~~~~~-~~~~~~ 270 (728)
+++++. ++. . ...+..-. .....-++.+++||+ |++.... ...|+++|.++ ++. ..+.-... .....+
T Consensus 174 ~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~--~~~v~~~d~~t--G~~~~~i~~p~~~~t~~~f 248 (297)
T 3g4e_A 174 DAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYN--GGRVIRLDPVT--GKRLQTVKLPVDKTTSCCF 248 (297)
T ss_dssp EEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEET--TTEEEEECTTT--CCEEEEEECSSSBEEEEEE
T ss_pred EEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcC--CCEEEEEcCCC--ceEEEEEECCCCCceEEEE
Confidence 888873 443 1 12222211 112334678899996 5555443 24699999886 333 23322212 223345
Q ss_pred e-ecCCEEEEEEcCC
Q 004839 271 E-HHEGFLYLFTDAA 284 (728)
Q Consensus 271 ~-~dg~~l~~~tn~~ 284 (728)
. +++++||+.+...
T Consensus 249 ~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 249 GGKNYSEMYVTCARD 263 (297)
T ss_dssp ESGGGCEEEEEEBCT
T ss_pred eCCCCCEEEEEcCCc
Confidence 5 7888999988754
No 397
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.39 E-value=0.017 Score=61.95 Aligned_cols=199 Identities=10% Similarity=0.006 Sum_probs=111.7
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 204 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t 204 (728)
....+.|+|||+ | |..+..+. .|+++|+++++............++|++|++.||.+..+. ...|++++..+
T Consensus 132 ~P~~la~d~~g~-l-yv~d~~~~---~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~---~~~I~~~d~~~ 203 (409)
T 3hrp_A 132 YMWGIAAVGNNT-V-LAYQRDDP---RVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEG---THTVYVYMKAS 203 (409)
T ss_dssp CEEEEEECSTTE-E-EEEETTTT---EEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSST---TCEEEEEEGGG
T ss_pred CceEEEEeCCCC-E-EEEecCCC---cEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCC---CceEEEEEcCC
Confidence 456778999998 4 55565433 4899999998765543222222299999999887763221 22799998865
Q ss_pred CCceeEEee-ec-CcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEe----eecCC-ce---EEEEeecC
Q 004839 205 TDEDALLLE-ES-NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLI----WECEG-LA---HCIVEHHE 274 (728)
Q Consensus 205 ~~~~~lv~~-~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l----~~~~~-~~---~~~~~~dg 274 (728)
+.....+-. .. ......++.++|++..|++. .. ...|+++|++++ ....+ ..... .. ...+++++
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~-d~--~~~I~~~d~~~~--~~~~~~~~~~~g~~~~~P~~~ia~~p~~ 278 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV-DS--NKNFGRFNVKTQ--EVTLIKQLELSGSLGTNPGPYLIYYFVD 278 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE-CT--TCEEEEEETTTC--CEEEEEECCCCSCCCCSSCCEEEEETTT
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEE-EC--CCcEEEEECCCC--CEEEEecccccCCCCCCccccEEEeCCC
Confidence 532222200 01 11112346789977778773 32 458999999873 33333 11111 11 34556767
Q ss_pred CEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecC--C-----------CceEEEEEeeC-CEEEEEEecCCe
Q 004839 275 GFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDD--Q-----------GLVVEDVDFCK-THMALILREGRT 340 (728)
Q Consensus 275 ~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~--~-----------~~~i~~~~~~~-~~lv~~~~~~g~ 340 (728)
+.||+.... +..|++++.+ .....++... . -....++.+.. +.||+... .+.
T Consensus 279 g~lyv~d~~--------~~~I~~~~~~-----g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~-~~~ 344 (409)
T 3hrp_A 279 SNFYMSDQN--------LSSVYKITPD-----GECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG-FKG 344 (409)
T ss_dssp TEEEEEETT--------TTEEEEECTT-----CCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET-TTT
T ss_pred CEEEEEeCC--------CCEEEEEecC-----CCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC-CCC
Confidence 888876432 2457887765 2222222111 0 12356777764 35666644 033
Q ss_pred eEEEEEecCC
Q 004839 341 YRLCSVSLPL 350 (728)
Q Consensus 341 ~~l~~~~l~~ 350 (728)
.+|.++++..
T Consensus 345 ~~I~~~~~~~ 354 (409)
T 3hrp_A 345 YCLRKLDILD 354 (409)
T ss_dssp CEEEEEETTT
T ss_pred CEEEEEECCC
Confidence 4677787543
No 398
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.37 E-value=0.004 Score=67.56 Aligned_cols=116 Identities=9% Similarity=-0.028 Sum_probs=73.2
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCC-----ce------eccCc--cceeeeEEEecCCCEEEEEEecCC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSG-----AL------CSKPQ--AVRVSNIAWAKDGQALIYVVTDQN 191 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg-----~~------~~~~~--~~~~~~~~WspDg~~l~y~~~~~~ 191 (728)
.+..++|||||++||.... .|+....|+|+|+.++ +. ..... ...+..++|+|++..++.+...+
T Consensus 94 ~v~~l~~spdg~~lav~~~-sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D- 171 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMM-SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD- 171 (434)
T ss_dssp CEEEEEECTTSCEEEEEEE-ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT-
T ss_pred cccEEEEcCCCCEEEEEEe-ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC-
Confidence 4677899999999997542 2344677999998765 11 11111 34578899999843344443332
Q ss_pred CCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCC
Q 004839 192 KRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAA 250 (728)
Q Consensus 192 ~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~ 250 (728)
..|...|+.++.. ..... ........+.|||||++|+..+.++ .|.++|+.
T Consensus 172 ---g~v~iwD~~~~~~-~~~~~-~~~~~v~~v~wspdg~~lasgs~dg---~v~iwd~~ 222 (434)
T 2oit_A 172 ---GSIAVLQVTETVK-VCATL-PSTVAVTSVCWSPKGKQLAVGKQNG---TVVQYLPT 222 (434)
T ss_dssp ---SCEEEEEESSSEE-EEEEE-CGGGCEEEEEECTTSSCEEEEETTS---CEEEECTT
T ss_pred ---CeEEEEEcCCCcc-eeecc-CCCCceeEEEEcCCCCEEEEEcCCC---cEEEEccC
Confidence 3578888876521 11111 1122345789999999998766543 57888886
No 399
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.36 E-value=0.03 Score=59.89 Aligned_cols=121 Identities=11% Similarity=0.063 Sum_probs=69.1
Q ss_pred eceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCcc-----ceeeeEEEecCCCEEEEEEe-----------cC
Q 004839 127 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA-----VRVSNIAWAKDGQALIYVVT-----------DQ 190 (728)
Q Consensus 127 ~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~-----~~~~~~~WspDg~~l~y~~~-----------~~ 190 (728)
-.+..+|||=+|....+..|+....|.++|.+|++.+..-.. .....+.|+||++ ++|++. +.
T Consensus 141 h~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~ 219 (462)
T 2ece_A 141 HTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKL 219 (462)
T ss_dssp EEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCT
T ss_pred cceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccch
Confidence 345689999333333333455556799999999986653321 1234589999999 445542 00
Q ss_pred C----CCcceeEEEECCCCC-ceeEEeeecCcceEEEE--EEcCCCCEEEEEEc---CCCceEEEEEeC
Q 004839 191 N----KRPYQIYCSIIGSTD-EDALLLEESNENVYVNI--RHTKDFHFVCVHTF---STTSSKVFLINA 249 (728)
Q Consensus 191 ~----~~~~~v~~~~l~t~~-~~~lv~~~~~~~~~~~~--~~SpDg~~l~~~~~---~~~~~~l~~~dl 249 (728)
. ....+|..+|+.+.+ ..++-..+ ...--..+ .++|||+++++... ...++.|+++..
T Consensus 220 ~~~~~~~~d~V~v~D~~~~k~~~tI~vg~-~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 220 EHLKDRYGNRIHFWDLRKRKRIHSLTLGE-ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp TTHHHHSCCEEEEEETTTTEEEEEEESCT-TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred hhhhhccCCEEEEEECCCCcEeeEEecCC-CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 0 235689999998764 22222111 11111223 45999999888765 112356665443
No 400
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.35 E-value=0.047 Score=56.40 Aligned_cols=139 Identities=12% Similarity=0.121 Sum_probs=85.6
Q ss_pred EeeceeeCCC---CCEEEEEEEcCCCcEEEEEEEECCC-CceeccCc---cceeeeEEEecCCCEEEEEEecCCCCccee
Q 004839 125 YEELSEVSPD---HKFLAYTMYDKDNDYFTLSVRNLNS-GALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQI 197 (728)
Q Consensus 125 ~~~~~~~SPD---G~~lA~~~~~~g~e~~~l~v~dl~t-g~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~v 197 (728)
.+..++|||| |++||... .+| .|+|+|+.+ ++...... ...+..++|+||++.|+....+ ..|
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~-~dg----~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v 110 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGS-WAN----DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-----KTA 110 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEE-TTS----EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEE
T ss_pred ceEEEEEcCCCCCceEEEEEC-CCC----cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-----CcE
Confidence 5778899999 58887764 455 399999998 54432221 4467889999999988765332 368
Q ss_pred EEEECCCCCceeEEeeecCcceEEEEEE--cCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCC
Q 004839 198 YCSIIGSTDEDALLLEESNENVYVNIRH--TKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEG 275 (728)
Q Consensus 198 ~~~~l~t~~~~~lv~~~~~~~~~~~~~~--SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~ 275 (728)
...++.+++... +.. .. .....+.| ++++++|+..+.+ ..|++.|+.++. ....+.... ....+...+.
T Consensus 111 ~iwd~~~~~~~~-~~~-~~-~~v~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~-~~~~~~~~~--~~~~~~~~~~ 181 (368)
T 3mmy_A 111 KMWDLSSNQAIQ-IAQ-HD-APVKTIHWIKAPNYSCVMTGSWD---KTLKFWDTRSSN-PMMVLQLPE--RCYCADVIYP 181 (368)
T ss_dssp EEEETTTTEEEE-EEE-CS-SCEEEEEEEECSSCEEEEEEETT---SEEEEECSSCSS-CSEEEECSS--CEEEEEEETT
T ss_pred EEEEcCCCCcee-ecc-cc-CceEEEEEEeCCCCCEEEEccCC---CcEEEEECCCCc-EEEEEecCC--CceEEEecCC
Confidence 888988764222 222 22 22345677 9999988766553 368899987742 223333222 2223344455
Q ss_pred EEEEEEc
Q 004839 276 FLYLFTD 282 (728)
Q Consensus 276 ~l~~~tn 282 (728)
.+++.+.
T Consensus 182 ~~~~~~~ 188 (368)
T 3mmy_A 182 MAVVATA 188 (368)
T ss_dssp EEEEEEG
T ss_pred eeEEEeC
Confidence 5555444
No 401
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.0036 Score=69.21 Aligned_cols=183 Identities=8% Similarity=-0.021 Sum_probs=97.6
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGST 205 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~ 205 (728)
+..+.|||||++||=+.+ + .+|. |.+.++.+. .....+..+.++||| .+. -. ++.++
T Consensus 18 v~sv~~SpDG~~iASas~-D----~TV~--d~~~~~~l~-gh~~~v~~V~FsPdg-------~~~---~~-----~~~~~ 74 (588)
T 2j04_A 18 KNNLTWARDGTLYLTTFP-D----ISIG--QPKYAKDIN-CNSKNLFHVKEFPLE-------FEN---KL-----DFELA 74 (588)
T ss_dssp SCCEEECTTSCEEEECSS-S----EEEE--EECCCSCCS-SBGGGTEEEEEECCC-------CCC---TT-----TTSCC
T ss_pred EEEEEECCCCCEEEEEcC-C----ceee--cccccceec-CCCccEEEEEECCCC-------Ccc---eE-----EEEeC
Confidence 567889999999986532 2 2344 776665442 124467789999999 111 11 12222
Q ss_pred CceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC------ceEEEEeecCCEEEE
Q 004839 206 DEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG------LAHCIVEHHEGFLYL 279 (728)
Q Consensus 206 ~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~------~~~~~~~~dg~~l~~ 279 (728)
+... ++.-....+...++|||||++|+..+.++ .+.+.|.++ ....+. ... .....++|||+.|+.
T Consensus 75 ~~~~-~~~~~~~~~V~~vawSPdG~~LAs~s~dg---~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAs 146 (588)
T 2j04_A 75 QQNG-LLNSQPVCYPRVCKPSPIDDWMAVLSNNG---NVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVV 146 (588)
T ss_dssp CSSC-SSTTSCSCCEEEEEECSSSSCEEEEETTS---CEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSCEEE
T ss_pred CCce-EeecCCCCcEEEEEECCCCCEEEEEeCCC---cEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCEEEE
Confidence 1111 11111134567789999999998877654 366667432 222222 111 223456799888887
Q ss_pred EEcCCccCCCCCceEEEEeeCCCCCCCCC---CeEEee--cCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCC
Q 004839 280 FTDAAKEGQEADNHYLLRCPVDASFPSRT---WESVFI--DDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 280 ~tn~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~li~--~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
.+..+ ..+|+.+.-. ...... ...+-. .+....+..+++.++. ++....++. ++++++..
T Consensus 147 gs~DG-------tVkIWd~~~~-~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~t--VrlWd~~~ 211 (588)
T 2j04_A 147 GNEDG-------ELQFFSIRKN-SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNS--VFSMTVSA 211 (588)
T ss_dssp EETTS-------EEEEEECCCC-TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCC--EEEECCCS
T ss_pred EcCCC-------EEEEEECCCC-ccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCe--EEEEECCC
Confidence 65533 2455554321 000000 122210 1123467888888877 555555443 55556543
No 402
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.35 E-value=0.05 Score=58.79 Aligned_cols=187 Identities=11% Similarity=-0.020 Sum_probs=111.7
Q ss_pred eeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCc
Q 004839 130 EVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE 207 (728)
Q Consensus 130 ~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~ 207 (728)
.++|+|++|+... .+|. |+++|+.+++.+.... ...+..+.|+||++.|+-...+ ..|..+|+.+++.
T Consensus 275 ~~~~~~~~l~~~~-~d~~----i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~ 344 (464)
T 3v7d_B 275 TVSGHGNIVVSGS-YDNT----LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD-----TTIRIWDLENGEL 344 (464)
T ss_dssp EEEEETTEEEEEE-TTSC----EEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEE
T ss_pred EEcCCCCEEEEEe-CCCe----EEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcE
Confidence 4689999998774 4554 9999999987655322 4467889999999987765432 3688889877642
Q ss_pred eeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCCEEEEEEcCCccC
Q 004839 208 DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKEG 287 (728)
Q Consensus 208 ~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~~ 287 (728)
...+..... ....+.++ +++|+..+.+ ..|.+.|+.++. ...............+++++..++..+ ++
T Consensus 345 -~~~~~~h~~-~v~~~~~~--~~~l~s~s~d---g~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~--dg-- 412 (464)
T 3v7d_B 345 -MYTLQGHTA-LVGLLRLS--DKFLVSAAAD---GSIRGWDANDYS-RKFSYHHTNLSAITTFYVSDNILVSGS--EN-- 412 (464)
T ss_dssp -EEEECCCSS-CEEEEEEC--SSEEEEEETT---SEEEEEETTTCC-EEEEEECTTCCCEEEEEECSSEEEEEE--TT--
T ss_pred -EEEEeCCCC-cEEEEEEc--CCEEEEEeCC---CcEEEEECCCCc-eeeeecCCCCccEEEEEeCCCEEEEec--CC--
Confidence 222222222 23345555 6776655543 358888988732 122222222223345667777655543 22
Q ss_pred CCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEec
Q 004839 288 QEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSL 348 (728)
Q Consensus 288 ~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l 348 (728)
.|...++. . ++............+..+.+.++.+++....+|...+..+|+
T Consensus 413 ------~i~iwd~~-~---g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~~i~~ldf 463 (464)
T 3v7d_B 413 ------QFNIYNLR-S---GKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEILDF 463 (464)
T ss_dssp ------EEEEEETT-T---CCEEESCTTTTCSEEEEEEEETTEEEEEEEETTEEEEEEEEC
T ss_pred ------eEEEEECC-C---CcEEehhhccCCCcEEEEEecCCEEEEEEEeCCeEEEEEeec
Confidence 24444443 1 111110112234567788888899999988888877777764
No 403
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.35 E-value=0.0038 Score=66.72 Aligned_cols=150 Identities=6% Similarity=-0.061 Sum_probs=80.3
Q ss_pred ceeeCCCCCEEEEEEEcC-------C--------CcEEEEEEEECCCCceeccCccc----eeeeE--EEecCCCEEEEE
Q 004839 128 LSEVSPDHKFLAYTMYDK-------D--------NDYFTLSVRNLNSGALCSKPQAV----RVSNI--AWAKDGQALIYV 186 (728)
Q Consensus 128 ~~~~SPDG~~lA~~~~~~-------g--------~e~~~l~v~dl~tg~~~~~~~~~----~~~~~--~WspDg~~l~y~ 186 (728)
.+.|+||++ ++|+++-+ | ....+|.++|+++++.++....+ ....+ .++|||+.+|.+
T Consensus 192 d~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~ 270 (462)
T 2ece_A 192 DFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFIN 270 (462)
T ss_dssp CEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEE
T ss_pred eEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEE
Confidence 467899999 55665411 0 11246999999998655432221 22233 459999987776
Q ss_pred Ee-cCCCCcceeEEEECCCCC-ceeEEe--ee----------cC-----cceEEEEEEcCCCCEEEEEEcCCCceEEEEE
Q 004839 187 VT-DQNKRPYQIYCSIIGSTD-EDALLL--EE----------SN-----ENVYVNIRHTKDFHFVCVHTFSTTSSKVFLI 247 (728)
Q Consensus 187 ~~-~~~~~~~~v~~~~l~t~~-~~~lv~--~~----------~~-----~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~ 247 (728)
.. ........|+.+....+. +...+. .. .. .....++.+|+|||+|+++.... +.|.++
T Consensus 271 ~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~--d~Vavf 348 (462)
T 2ece_A 271 MVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI--GEVRQY 348 (462)
T ss_dssp EEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT--TEEEEE
T ss_pred EeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC--CEEEEE
Confidence 54 111123455543322221 111110 00 00 11234578999999998876543 578888
Q ss_pred eCCCCCCCeEEee---ec-----------C----CceEEEEeecCCEEEEEE
Q 004839 248 NAADPFSGLTLIW---EC-----------E----GLAHCIVEHHEGFLYLFT 281 (728)
Q Consensus 248 dl~~~~~~~~~l~---~~-----------~----~~~~~~~~~dg~~l~~~t 281 (728)
|+.++ +.++.+. -. . ......+++||++||+..
T Consensus 349 dV~d~-~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 349 DISNP-FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECSST-TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EecCC-CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 87643 2333321 11 0 123356788888877753
No 404
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.31 E-value=0.075 Score=54.43 Aligned_cols=142 Identities=8% Similarity=0.018 Sum_probs=83.4
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCC-----EEEEEEecCCCCcceeE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQ-----ALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~-----~l~y~~~~~~~~~~~v~ 198 (728)
.+..+.|+|||++|+-.. .++. |.++|+.+........ ...+..+.|+|+++ .++++... ...|.
T Consensus 109 ~v~~~~~~~~~~~l~s~s-~D~~----i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~----d~~i~ 179 (319)
T 3frx_A 109 DVMSVDIDKKASMIISGS-RDKT----IKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN----DKMVK 179 (319)
T ss_dssp CEEEEEECTTSCEEEEEE-TTSC----EEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEET----TSCEE
T ss_pred cEEEEEEcCCCCEEEEEe-CCCe----EEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeC----CCEEE
Confidence 467788999999987764 4554 8999997654333322 34567788988543 13344332 23577
Q ss_pred EEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCCEEE
Q 004839 199 CSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLY 278 (728)
Q Consensus 199 ~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~~l~ 278 (728)
..++.+.+.. ..+.... .....+.++|||++|+..+.+ ..|.+.|+.++. ....+..........+++++..|+
T Consensus 180 ~wd~~~~~~~-~~~~~h~-~~v~~~~~sp~g~~l~s~~~d---g~i~iwd~~~~~-~~~~~~~~~~v~~~~~sp~~~~la 253 (319)
T 3frx_A 180 AWNLNQFQIE-ADFIGHN-SNINTLTASPDGTLIASAGKD---GEIMLWNLAAKK-AMYTLSAQDEVFSLAFSPNRYWLA 253 (319)
T ss_dssp EEETTTTEEE-EEECCCC-SCEEEEEECTTSSEEEEEETT---CEEEEEETTTTE-EEEEEECCSCEEEEEECSSSSEEE
T ss_pred EEECCcchhh-eeecCCC-CcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCc-EEEEecCCCcEEEEEEcCCCCEEE
Confidence 7788765321 1222222 224567899999988765543 468888987732 222332222223345667777666
Q ss_pred EEE
Q 004839 279 LFT 281 (728)
Q Consensus 279 ~~t 281 (728)
..+
T Consensus 254 ~~~ 256 (319)
T 3frx_A 254 AAT 256 (319)
T ss_dssp EEE
T ss_pred EEc
Confidence 544
No 405
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.31 E-value=0.016 Score=59.70 Aligned_cols=162 Identities=10% Similarity=-0.019 Sum_probs=93.2
Q ss_pred eeceeeCCCCCEEEEEEEcCC---CcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKD---NDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 201 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g---~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~ 201 (728)
+..+.++|||+.++ + +..+ .....|+.+|.++++...... ......++|+|||+.||++... ...|++++
T Consensus 137 ~~~i~~d~~g~l~v-~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~----~~~i~~~d 210 (333)
T 2dg1_A 137 IDDMVFDSKGGFYF-T-DFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETT----ANRLHRIA 210 (333)
T ss_dssp EEEEEECTTSCEEE-E-ECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGG----GTEEEEEE
T ss_pred ccceEECCCCCEEE-E-eccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCC----CCeEEEEE
Confidence 55678999997543 3 2221 123569999998877554322 2245678999999988876432 34789999
Q ss_pred CCCC-Cc-e----eEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-------CceEE
Q 004839 202 IGST-DE-D----ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-------GLAHC 268 (728)
Q Consensus 202 l~t~-~~-~----~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-------~~~~~ 268 (728)
+.+. .. . .............++.+++||+. ++.... ...|+++|.++ .....+.... .....
T Consensus 211 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l-~v~~~~--~~~v~~~d~~g--~~~~~~~~~~~~~g~~~~~~~~ 285 (333)
T 2dg1_A 211 LEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNL-YVAMYG--QGRVLVFNKRG--YPIGQILIPGRDEGHMLRSTHP 285 (333)
T ss_dssp ECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCE-EEEEET--TTEEEEECTTS--CEEEEEECTTGGGTCSCBCCEE
T ss_pred ecCCCcCcccccceEEEecCCCCCCCceEECCCCCE-EEEEcC--CCEEEEECCCC--CEEEEEEcCCCccccccCcceE
Confidence 8642 21 1 11111111123345788999984 443322 24688898853 2333333221 11233
Q ss_pred EEeecCCEEEEEEcCCccCCCCCceEEEEeeCC
Q 004839 269 IVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVD 301 (728)
Q Consensus 269 ~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~ 301 (728)
.+++|++.||+.++.+.. .....|++++..
T Consensus 286 ~~~~dg~~L~v~~~~g~~---~~~~~l~~~~~~ 315 (333)
T 2dg1_A 286 QFIPGTNQLIICSNDIEM---GGGSMLYTVNGF 315 (333)
T ss_dssp EECTTSCEEEEEEECGGG---TCCEEEEEEECS
T ss_pred EECCCCCEEEEEeCccCC---CCCceEEEEecc
Confidence 456778889988776421 123678888765
No 406
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=97.31 E-value=0.0015 Score=64.53 Aligned_cols=144 Identities=15% Similarity=0.027 Sum_probs=83.9
Q ss_pred EEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCc-ccHHH----------------HHHHHHCCeEEE
Q 004839 467 CEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDK-RWRSE----------------LKSLLDRGWVVA 529 (728)
Q Consensus 467 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~----------------~~~l~~~Gy~v~ 529 (728)
.--+.+....|..+-.|++..+. .....|++++++||||.+... ....+ ...|. +-..++
T Consensus 21 sGy~~v~~~~~~~lFywf~es~~--~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~-~~anvl 97 (255)
T 1whs_A 21 SGYITVDEGAGRSLFYLLQEAPE--DAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWN-KVANVL 97 (255)
T ss_dssp EEEEEEETTTTEEEEEEEECCCG--GGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGG-GTSEEE
T ss_pred EEEEECCCCCCcEEEEEEEEecC--CCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCccccc-ccCCEE
Confidence 34556665667788877665442 234579999999999976432 11000 01121 236789
Q ss_pred EEcC-CCCCCCCCccccccc-cCCCCCcHHHHHHHHHHHH-HcCCCCCCcEEEEEeCccHHHHHHHHHh-----CC-Cce
Q 004839 530 FADV-RGGGGGGKKWHHDGR-RTKKLNSIKDFISCARFLI-EKEIVKEHKLAGWGYSAGGLLVAAAINC-----CP-DLF 600 (728)
Q Consensus 530 ~~d~-RG~g~~G~~~~~~~~-~~~~~~~~~D~~~~~~~l~-~~~~~d~~ri~i~G~S~GG~~~~~~~~~-----~p-~~f 600 (728)
..|. .|.| +...-..... ...-....+|+...++... +.+....+++.|.|.||||..+..++.. .+ =-+
T Consensus 98 fiDqPvGtG-fSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inL 176 (255)
T 1whs_A 98 FLDSPAGVG-FSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINL 176 (255)
T ss_dssp EECCSTTST-TCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEE
T ss_pred EEecCCCCc-cCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCccccc
Confidence 9995 4555 3211001011 0111123445555554333 3344455789999999999998777642 11 357
Q ss_pred eEEEEeCCcccchh
Q 004839 601 RAVVLEVPFLDATN 614 (728)
Q Consensus 601 ~a~v~~~p~~d~~~ 614 (728)
+++++..|++|...
T Consensus 177 kGi~ign~~~d~~~ 190 (255)
T 1whs_A 177 KGFMVGNGLIDDYH 190 (255)
T ss_dssp EEEEEEEECCBHHH
T ss_pred ceEEecCCccCHHH
Confidence 99999999988754
No 407
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.29 E-value=0.0026 Score=65.14 Aligned_cols=148 Identities=11% Similarity=0.042 Sum_probs=83.7
Q ss_pred eeceeeCCCCCEEEEEEEcC-C-------------CcEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecCC
Q 004839 126 EELSEVSPDHKFLAYTMYDK-D-------------NDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQN 191 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~-g-------------~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~ 191 (728)
...+.++|||+.. ++ |.. | .....|+.+|.++|+............++|+|||+.||++.....
T Consensus 133 ~~~i~~d~dG~l~-~t-d~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spdg~~lyv~~~~~~ 210 (305)
T 3dr2_A 133 PNDLIVARDGAIW-FT-DPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQ 210 (305)
T ss_dssp CCCEEECTTSCEE-EE-CCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSEEEEEECCC-
T ss_pred CCCEEECCCCCEE-Ee-CcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcCCCCEEEEEecCCc
Confidence 3467899999833 43 210 0 113569999998887655432223457899999998887643210
Q ss_pred -CCcceeEEEECCCCC-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEE
Q 004839 192 -KRPYQIYCSIIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCI 269 (728)
Q Consensus 192 -~~~~~v~~~~l~t~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~ 269 (728)
.....|+++++..+. ....++.........++.+++||+ |++... ..|++++.++ .....+..........
T Consensus 211 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~----~gv~~~~~~g--~~~~~~~~~~~~~~~~ 283 (305)
T 3dr2_A 211 GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSG----TGVCVFDSDG--QLLGHIPTPGTASNCT 283 (305)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCS----SEEEEECTTS--CEEEEEECSSCCCEEE
T ss_pred CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecC----CcEEEECCCC--CEEEEEECCCceeEEE
Confidence 012579999886542 111122111111112467899998 544432 2499999854 2333333222222334
Q ss_pred EeecCCEEEEEEc
Q 004839 270 VEHHEGFLYLFTD 282 (728)
Q Consensus 270 ~~~dg~~l~~~tn 282 (728)
++++++.||+.++
T Consensus 284 f~~d~~~L~it~~ 296 (305)
T 3dr2_A 284 FDQAQQRLFITGG 296 (305)
T ss_dssp ECTTSCEEEEEET
T ss_pred EeCCCCEEEEEcC
Confidence 4567788888765
No 408
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.28 E-value=0.091 Score=54.84 Aligned_cols=175 Identities=6% Similarity=-0.036 Sum_probs=107.5
Q ss_pred EEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCC
Q 004839 152 LSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFH 230 (728)
Q Consensus 152 l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~ 230 (728)
|+.+++++.+...+.. ......++|.+++..||++-. ...+|+++++.+.....++...... ..++++.+.++
T Consensus 55 I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~----~~~~I~r~~~~g~~~~~~~~~~~~~--p~glavd~~~g 128 (349)
T 3v64_C 55 IRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV----TLDRILRANLNGSNVEEVVSTGLES--PGGLAVDWVHD 128 (349)
T ss_dssp EEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEET----TTTEEEEEETTSCSCEEEECSSCSC--CCEEEEETTTT
T ss_pred eEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEec----cCCceEEEecCCCCceEEEeCCCCC--ccEEEEecCCC
Confidence 8888888766544322 345678999998889998742 2347999998766433333222111 23567788888
Q ss_pred EEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-C-ceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCC
Q 004839 231 FVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-G-LAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRT 308 (728)
Q Consensus 231 ~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~-~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~ 308 (728)
.|+++... ...|+++++++ ...+.+.... . .....+++.++.||+..... ..+|++++.+ . ..
T Consensus 129 ~ly~~d~~--~~~I~~~~~dG--~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~-------~~~I~r~~~d-G---~~ 193 (349)
T 3v64_C 129 KLYWTDSG--TSRIEVANLDG--AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN-------TPRIEASSMD-G---SG 193 (349)
T ss_dssp EEEEEETT--TTEEEEEETTS--CSCEEEECTTCSCEEEEEEETTTTEEEEEECSS-------SCEEEEEETT-S---CS
T ss_pred eEEEEcCC--CCeEEEEcCCC--CceEEEEeCCCCCcceEEEecCcCeEEEeccCC-------CCEEEEEeCC-C---CC
Confidence 88887654 34799999876 2334443322 1 12335667788888865432 2569998876 1 22
Q ss_pred CeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCC
Q 004839 309 WESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 309 ~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
.+.++ ...-....++.++ ++.||+..... .+|.+++++.
T Consensus 194 ~~~~~-~~~~~~PnGla~d~~~~~lY~aD~~~--~~I~~~~~dG 234 (349)
T 3v64_C 194 RRIIA-DTHLFWPNGLTIDYAGRRMYWVDAKH--HVIERANLDG 234 (349)
T ss_dssp CEESC-CSSCSCEEEEEEETTTTEEEEEETTT--TEEEEEETTS
T ss_pred cEEEE-ECCCCCcceEEEeCCCCEEEEEECCC--CEEEEEeCCC
Confidence 23332 2223346677776 57888886544 4788888763
No 409
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.28 E-value=0.013 Score=62.98 Aligned_cols=112 Identities=7% Similarity=0.107 Sum_probs=73.6
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCC-Cceecc--------Cc-cceeeeEEEecCC-CEEEEEEecCCCC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS-GALCSK--------PQ-AVRVSNIAWAKDG-QALIYVVTDQNKR 193 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~t-g~~~~~--------~~-~~~~~~~~WspDg-~~l~y~~~~~~~~ 193 (728)
.+..+.|||||++|+.. . +| .|+++|+.+ ++.... .. ...+..++|+||+ +.|+....+
T Consensus 179 ~v~~~~~~~~~~~l~s~-~-d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---- 248 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-D-DL----RINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK---- 248 (447)
T ss_dssp CCCEEEECTTSSEEEEE-C-SS----EEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT----
T ss_pred ceEEEEEcCCCCEEEEe-C-CC----eEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC----
Confidence 46778999999999875 3 44 499999984 333321 11 3457889999999 666655432
Q ss_pred cceeEEEECCCCCc---eeEEeeecCc-----------ceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 194 PYQIYCSIIGSTDE---DALLLEESNE-----------NVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 194 ~~~v~~~~l~t~~~---~~lv~~~~~~-----------~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
..|.++|+.++.. ....+..... .....+.|+|||++|+..+. ..|.+.|+..
T Consensus 249 -g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----~~v~iwd~~~ 315 (447)
T 3dw8_B 249 -GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY----LSVKVWDLNM 315 (447)
T ss_dssp -SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES----SEEEEEETTC
T ss_pred -CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC----CeEEEEeCCC
Confidence 3688888877642 1233333322 13457899999999875544 4688888875
No 410
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.27 E-value=0.057 Score=57.31 Aligned_cols=175 Identities=5% Similarity=-0.052 Sum_probs=107.4
Q ss_pred EEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCceeEEeeecCcceEEEEEEcCCCC
Q 004839 152 LSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFH 230 (728)
Q Consensus 152 l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~ 230 (728)
|+.+++++++...+.. ......++|.+++..||++-. ...+|+++++.+.....++...... -.++++.+.+.
T Consensus 98 I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~----~~~~I~r~~~~g~~~~~~~~~~~~~--p~glavd~~~g 171 (386)
T 3v65_B 98 IRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV----TLDRILRANLNGSNVEEVVSTGLES--PGGLAVDWVHD 171 (386)
T ss_dssp EEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEET----TTTEEEEEETTSCCEEEEECSSCSC--CCCEEEETTTT
T ss_pred ceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeC----CCCcEEEEecCCCCcEEEEeCCCCC--ccEEEEEeCCC
Confidence 8889998876544322 345678999998889988742 2348999998765433333222111 12467788888
Q ss_pred EEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-C-ceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCC
Q 004839 231 FVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-G-LAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRT 308 (728)
Q Consensus 231 ~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~-~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~ 308 (728)
.|+++... ...|+++++++ ...+.+.... . .....+++.++.||+..... ..+|++++.+ . ..
T Consensus 172 ~lY~~d~~--~~~I~~~~~dg--~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~-------~~~I~r~~~d-G---~~ 236 (386)
T 3v65_B 172 KLYWTDSG--TSRIEVANLDG--AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN-------TPRIEASSMD-G---SG 236 (386)
T ss_dssp EEEEEETT--TTEEEECBTTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEECSS-------SCEEEEEETT-S---CS
T ss_pred eEEEEcCC--CCeEEEEeCCC--CceEEeecCCCCCCcEEEEEcCCCeEEEeccCC-------CCEEEEEeCC-C---CC
Confidence 88887654 34788999876 2333443322 1 12335667788888764432 2569998876 1 22
Q ss_pred CeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCC
Q 004839 309 WESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 309 ~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
.+.++. ..-....++.+. ++.||+..... .+|.+++++.
T Consensus 237 ~~~~~~-~~~~~PnGlavd~~~~~lY~aD~~~--~~I~~~d~dG 277 (386)
T 3v65_B 237 RRIIAD-THLFWPNGLTIDYAGRRMYWVDAKH--HVIERANLDG 277 (386)
T ss_dssp CEEEEC-SSCSCEEEEEEEGGGTEEEEEETTT--TEEEEECTTS
T ss_pred cEEEEE-CCCCCeeeEEEeCCCCEEEEEECCC--CEEEEEeCCC
Confidence 233332 222345677775 57888886544 4788888753
No 411
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.27 E-value=0.036 Score=56.91 Aligned_cols=139 Identities=10% Similarity=-0.011 Sum_probs=79.7
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+....|||||++|+-.. .++ .|+++|+++|+...... ...+..++|+||++.|+-...| ..|.+.++
T Consensus 67 ~v~~~~~s~dg~~l~s~s-~D~----~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D-----~~i~vwd~ 136 (319)
T 3frx_A 67 IVQDCTLTADGAYALSAS-WDK----TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD-----KTIKVWTI 136 (319)
T ss_dssp CEEEEEECTTSSEEEEEE-TTS----EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT-----SCEEEEET
T ss_pred cEEEEEECCCCCEEEEEe-CCC----EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEEC
Confidence 466778999999987664 444 49999999998654322 4467889999999877655432 24666677
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCC------EEEEEEcCCCceEEEEEeCCCCCCCeEE-eeecCCce-EEEEeecC
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFH------FVCVHTFSTTSSKVFLINAADPFSGLTL-IWECEGLA-HCIVEHHE 274 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~------~l~~~~~~~~~~~l~~~dl~~~~~~~~~-l~~~~~~~-~~~~~~dg 274 (728)
..... ..+... ......+.++|+++ .|+..+.+ ..|.+.|+.+ ..... +......+ ...++++|
T Consensus 137 ~~~~~--~~~~~h-~~~v~~~~~~~~~~~~~~~~~l~s~~~d---~~i~~wd~~~--~~~~~~~~~h~~~v~~~~~sp~g 208 (319)
T 3frx_A 137 KGQCL--ATLLGH-NDWVSQVRVVPNEKADDDSVTIISAGND---KMVKAWNLNQ--FQIEADFIGHNSNINTLTASPDG 208 (319)
T ss_dssp TSCEE--EEECCC-SSCEEEEEECCC------CCEEEEEETT---SCEEEEETTT--TEEEEEECCCCSCEEEEEECTTS
T ss_pred CCCeE--EEEecc-CCcEEEEEEccCCCCCCCccEEEEEeCC---CEEEEEECCc--chhheeecCCCCcEEEEEEcCCC
Confidence 53221 112111 22234567777543 44433332 3577788876 22222 22222222 23456777
Q ss_pred CEEEEEE
Q 004839 275 GFLYLFT 281 (728)
Q Consensus 275 ~~l~~~t 281 (728)
+.|+..+
T Consensus 209 ~~l~s~~ 215 (319)
T 3frx_A 209 TLIASAG 215 (319)
T ss_dssp SEEEEEE
T ss_pred CEEEEEe
Confidence 7655443
No 412
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.25 E-value=0.16 Score=54.16 Aligned_cols=199 Identities=8% Similarity=-0.033 Sum_probs=118.3
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCc----eeccC--ccceeeeEEEecCCCEEEEEEecCCCCcceeEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA----LCSKP--QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 199 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~----~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~ 199 (728)
...+.|+++++.|.|+ |..+. .|+.++++++. ...+. .......++..+.++.||++.. ...+|.+
T Consensus 114 ~~~l~~d~~~~~lyws-D~~~~---~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~----~~~~I~~ 185 (400)
T 3p5b_L 114 VVALDTEVASNRIYWS-DLSQR---MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----VLGTVSV 185 (400)
T ss_dssp EEEEEEETTTTEEEEE-ETTTT---EEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEET----TTTEEEE
T ss_pred ceEEeeeeccCceEEE-ecCCC---eEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEEC----CCCeEEE
Confidence 4566799988888666 65543 48888887632 11111 1234556777777788988742 2347888
Q ss_pred EECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC--CceEEEEeecCCEE
Q 004839 200 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE--GLAHCIVEHHEGFL 277 (728)
Q Consensus 200 ~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~--~~~~~~~~~dg~~l 277 (728)
.++.......++..... .-.++++.|.+.+|+++.... ...|+++++++ ...+.+.... ......++++++.|
T Consensus 186 ~~~~g~~~~~l~~~~~~--~P~~iavdp~~g~ly~td~~~-~~~I~~~~~dG--~~~~~~~~~~l~~P~glavd~~~~~l 260 (400)
T 3p5b_L 186 ADTKGVKRKTLFRENGS--KPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRL 260 (400)
T ss_dssp ECTTTCSEEEEEECSSC--CEEEEEEETTTTEEEEEECSS-SCCEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred EeCCCCceEEEEeCCCC--CcceEEEecccCeEEEEeCCC-CCEEEEEeCCC--CccEEEEECCCCceEEEEEEeCCCEE
Confidence 88876543333322211 224678899888998876432 35799999976 3334443322 11234567788888
Q ss_pred EEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecC-CCceEEEEEeeCCEEEEEEecCCeeEEEEEecCCC
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDD-QGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~-~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
|+.-.. +.+|.+++.+ . ...+.++... .-....+++++++.||++...+ .+|.+++..++
T Consensus 261 Y~aD~~--------~~~I~~~d~d-G---~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~--~~V~~~~~~~G 321 (400)
T 3p5b_L 261 YWVDSK--------LHSISSIDVN-G---GNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN--EAIFSANRLTG 321 (400)
T ss_dssp EEEETT--------TTEEEEEETT-S---CCCEEEEECSSTTSSEEEEEEETTEEEEEESSS--CSEEEEESSSC
T ss_pred EEEECC--------CCEEEEEeCC-C---CccEEEEeCCCCCCCCEEEEEeCCEEEEecCCC--CeEEEEEcCCC
Confidence 886432 2468888876 2 2334444321 1234567888899998887443 45777775443
No 413
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.24 E-value=0.15 Score=52.29 Aligned_cols=175 Identities=6% Similarity=0.001 Sum_probs=104.4
Q ss_pred EEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCC----CCceeEEeeecCcceEEEEEEc
Q 004839 152 LSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS----TDEDALLLEESNENVYVNIRHT 226 (728)
Q Consensus 152 l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t----~~~~~lv~~~~~~~~~~~~~~S 226 (728)
|+.+|+++++...+.. ......++|.+++..||++-. ...+|+++++.+ .....++-..... -.++++.
T Consensus 12 I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~----~~~~I~~~~~~g~~~~~~~~~~~~~~~~~--p~glavd 85 (316)
T 1ijq_A 12 VRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL----SQRMICSTQLDRAHGVSSYDTVISRDIQA--PDGLAVD 85 (316)
T ss_dssp EEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEET----TTTEEEEEEC--------CEEEECSSCSC--CCEEEEE
T ss_pred EEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEEC----CCCcEEEEECCCCCCCcccEEEEeCCCCC--cCEEEEe
Confidence 8999999887544322 345678999999889999743 245899999876 2222222111111 1356777
Q ss_pred CCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-C-ceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCC
Q 004839 227 KDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-G-LAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASF 304 (728)
Q Consensus 227 pDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~-~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~ 304 (728)
+.++.|+++... ...|.++++++ ...+.+.... . .....+++.++.||+..... +.+|++++.+
T Consensus 86 ~~~~~ly~~d~~--~~~I~~~~~~g--~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~-------~~~I~~~~~d--- 151 (316)
T 1ijq_A 86 WIHSNIYWTDSV--LGTVSVADTKG--VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-------PAKIKKGGLN--- 151 (316)
T ss_dssp TTTTEEEEEETT--TTEEEEEETTS--SSEEEEEECTTCCEEEEEEETTTTEEEEEECSS-------SCEEEEEETT---
T ss_pred ecCCeEEEEECC--CCEEEEEeCCC--CceEEEEECCCCCcceEEeCCCCCEEEEEccCC-------CCeEEEEcCC---
Confidence 778888877543 35788999875 3344444322 1 12234566788888764321 2468888876
Q ss_pred CCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCC
Q 004839 305 PSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 305 ~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
+....++....-....++.++ ++.||+..... .+|.+++++.
T Consensus 152 --G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~--~~I~~~d~dg 195 (316)
T 1ijq_A 152 --GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL--HSISSIDVNG 195 (316)
T ss_dssp --SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTT--TEEEEEETTS
T ss_pred --CCCeEEEEECCCCCceEEEEeccCCEEEEEECCC--CeEEEEecCC
Confidence 223333322223446677776 57888876543 4788888763
No 414
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.23 E-value=0.04 Score=56.91 Aligned_cols=113 Identities=10% Similarity=0.003 Sum_probs=74.5
Q ss_pred EeeceeeCCC----CCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEec-CCCEEEEEEecCCCCccee
Q 004839 125 YEELSEVSPD----HKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAK-DGQALIYVVTDQNKRPYQI 197 (728)
Q Consensus 125 ~~~~~~~SPD----G~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~v 197 (728)
.+..+.|||| |++|+... .+| .|+++|+.+++.+.... ...+..+.|+| |++.|+.... ...|
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~-~dg----~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-----dg~i 140 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAG-SRG----IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK-----DHAL 140 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEE-TTC----EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET-----TSCE
T ss_pred cEEEEEeccCCCCCCCEEEEec-CCC----EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC-----CCeE
Confidence 4667789999 66777663 454 49999999988655332 45678899999 8876665532 2368
Q ss_pred EEEECCCCCceeEEee--ecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 198 YCSIIGSTDEDALLLE--ESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 198 ~~~~l~t~~~~~lv~~--~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
..+|+.+++. ...+. .........+.|+|||++|+....+. .|.+.|+.+
T Consensus 141 ~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~i~d~~~ 192 (366)
T 3k26_A 141 RLWNIQTDTL-VAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH---SLKLWRINS 192 (366)
T ss_dssp EEEETTTTEE-EEEECSTTSCSSCEEEEEECTTSSEEEEEETTS---CEEEEESCS
T ss_pred EEEEeecCeE-EEEecccccccCceeEEEECCCCCEEEEecCCC---CEEEEECCC
Confidence 8889877642 22221 12223346789999999887666532 466666654
No 415
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.22 E-value=0.21 Score=50.88 Aligned_cols=112 Identities=10% Similarity=0.069 Sum_probs=68.6
Q ss_pred EeeceeeCCCC-CEEEEEEEcCCCcEEEEEEEECCCCceecc------Cc-cceeeeEEEecCCCEEEEEEecCCCCcce
Q 004839 125 YEELSEVSPDH-KFLAYTMYDKDNDYFTLSVRNLNSGALCSK------PQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQ 196 (728)
Q Consensus 125 ~~~~~~~SPDG-~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~------~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 196 (728)
.+..++||||+ ++|| +...+|. |+|+|+.+++.... .. ...+..+.|+|||+.|+-...+ ..
T Consensus 40 ~V~~v~~sp~~~~~l~-S~s~D~~----i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d-----~~ 109 (340)
T 4aow_A 40 WVTQIATTPQFPDMIL-SASRDKT----IIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD-----GT 109 (340)
T ss_dssp CEEEEEECTTCTTEEE-EEETTSC----EEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SE
T ss_pred CEEEEEEeCCCCCEEE-EEcCCCe----EEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc-----cc
Confidence 57888999985 5554 4445554 99999987653211 11 3467889999999987665432 35
Q ss_pred eEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 197 IYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 197 v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
|...+........ ... ..........+++++++|+..+.+ ..+.+.|+..
T Consensus 110 i~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~s~s~d---~~~~~~d~~~ 159 (340)
T 4aow_A 110 LRLWDLTTGTTTR-RFV-GHTKDVLSVAFSSDNRQIVSGSRD---KTIKLWNTLG 159 (340)
T ss_dssp EEEEETTTTEEEE-EEE-CCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTS
T ss_pred ceEEeecccceee-eec-CCCCceeEEEEeecCccceeecCC---CeEEEEEeCC
Confidence 7777776553211 111 112223446788999987655443 2456667654
No 416
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.21 E-value=0.2 Score=49.52 Aligned_cols=212 Identities=12% Similarity=0.110 Sum_probs=119.5
Q ss_pred CcEEEeecccccccCCceEEeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc---cceeeeEEEecCCCE
Q 004839 106 IEQKLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQA 182 (728)
Q Consensus 106 ~~~~lld~n~~~~~~~~~~~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~ 182 (728)
..++.++...+..-.+ .+++++++||++.|....+.. ..|+.+|+. |+.+.... ......+++.+|++
T Consensus 12 ~y~~~~~~~~l~g~~~---~lSGla~~~~~~~L~aV~d~~----~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~- 82 (255)
T 3qqz_A 12 NYHATIDGKEIAGITN---NISSLTWSAQSNTLFSTINKP----AAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ- 82 (255)
T ss_dssp TCEEEEEEEECTTCCS---CEEEEEEETTTTEEEEEEETT----EEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-
T ss_pred ceEEEEeceECCCccc---CcceeEEeCCCCEEEEEECCC----CeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-
Confidence 4566666544443222 578889999998887666653 459999998 76554322 23677889998874
Q ss_pred EEEEEecCCCCcceeEEEECCCCCc----eeEEee---ecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCC
Q 004839 183 LIYVVTDQNKRPYQIYCSIIGSTDE----DALLLE---ESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSG 255 (728)
Q Consensus 183 l~y~~~~~~~~~~~v~~~~l~t~~~----~~lv~~---~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~ 255 (728)
++.+ .. +..+++.+++..... ...-+. .....-+-+++++|+++.|++...+. ...||.++--.....
T Consensus 83 ~~vs-~E---~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~~~~~~ 157 (255)
T 3qqz_A 83 FVIS-DE---RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGLLSSNE 157 (255)
T ss_dssp EEEE-ET---TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEESTTCSSC
T ss_pred EEEE-EC---CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEcccccCCc
Confidence 4343 32 235788888865432 111110 01111246789999998888755443 457888872111112
Q ss_pred eEEeee--------cCCceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCC--------Cc
Q 004839 256 LTLIWE--------CEGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQ--------GL 319 (728)
Q Consensus 256 ~~~l~~--------~~~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~--------~~ 319 (728)
.+.+.. ..+-....+++..++||+++... ..|+.++.+ +.......-.. -.
T Consensus 158 l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s--------~~L~~~d~~-----g~~~~~~~L~~g~~~l~~~~~ 224 (255)
T 3qqz_A 158 LHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES--------RALQEVTLV-----GEVIGEMSLTKGSRGLSHNIK 224 (255)
T ss_dssp CEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT--------TEEEEECTT-----CCEEEEEECSTTGGGCSSCCC
T ss_pred eeeecchhhccccccCCceeEEEcCCCCeEEEEECCC--------CeEEEEcCC-----CCEEEEEEcCCccCCcccccC
Confidence 333211 01112334566778899998864 357777655 22222211111 13
Q ss_pred eEEEEEeeC-CEEEEEEecCCeeEEEEEe
Q 004839 320 VVEDVDFCK-THMALILREGRTYRLCSVS 347 (728)
Q Consensus 320 ~i~~~~~~~-~~lv~~~~~~g~~~l~~~~ 347 (728)
..+++++.. +.||++...| .++++.
T Consensus 225 qpEGia~d~~G~lyIvsE~n---~~y~f~ 250 (255)
T 3qqz_A 225 QAEGVAMDASGNIYIVSEPN---RFYRFT 250 (255)
T ss_dssp SEEEEEECTTCCEEEEETTT---EEEEEE
T ss_pred CCCeeEECCCCCEEEEcCCc---eEEEEE
Confidence 568888885 4566663322 455554
No 417
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.21 E-value=0.15 Score=51.23 Aligned_cols=190 Identities=10% Similarity=-0.010 Sum_probs=100.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.| |||++||... .+| .|+++|+.+++...... ...+..++|+||++.|+....+ ..|...++
T Consensus 20 ~v~~~~~-~~~~~l~s~~-~dg----~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~ 88 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVS-RDG----TVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD-----TMINGVPL 88 (313)
T ss_dssp CEEEEEE-EETTEEEEEE-TTS----EEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT-----SCEEEEET
T ss_pred CcEEEEe-cCCCEEEEEE-cCC----cEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC-----CeEEEEEe
Confidence 4666778 9999988764 455 49999998887554322 4567889999999988776432 35666777
Q ss_pred CCCCce--eEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE-EEEee-cCCEEE
Q 004839 203 GSTDED--ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEH-HEGFLY 278 (728)
Q Consensus 203 ~t~~~~--~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~-~~~~~-dg~~l~ 278 (728)
...... ...+..... ....+.+ ++++|+..+.+ ..|.+.|.. .....+......+. ..+.+ +++.++
T Consensus 89 ~~~~~~~~~~~~~~~~~-~i~~~~~--~~~~l~~~~~d---~~i~~~d~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 89 FATSGEDPLYTLIGHQG-NVCSLSF--QDGVVISGSWD---KTAKVWKEG---SLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp TCCTTSCC-CEECCCSS-CEEEEEE--ETTEEEEEETT---SEEEEEETT---EEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred eecCCCCcccchhhccc-CEEEEEe--cCCEEEEEeCC---CCEEEEcCC---cEEEecccCCCceeEEEEccCCCCEEE
Confidence 554311 112222222 2334555 67776655543 357777721 12223332222222 23334 566665
Q ss_pred EEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCCC
Q 004839 279 LFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 279 ~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
..+..+ ..+++ +.. . ....+.......+..+.+..+..++....+| .+.++++.++
T Consensus 160 ~~~~d~-------~i~i~--d~~-----~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg--~i~i~d~~~~ 215 (313)
T 3odt_A 160 TASADK-------TIKLW--QND-----K-VIKTFSGIHNDVVRHLAVVDDGHFISCSNDG--LIKLVDMHTG 215 (313)
T ss_dssp EEETTS-------CEEEE--ETT-----E-EEEEECSSCSSCEEEEEEEETTEEEEEETTS--EEEEEETTTC
T ss_pred EEECCC-------CEEEE--ecC-----c-eEEEEeccCcccEEEEEEcCCCeEEEccCCC--eEEEEECCch
Confidence 544322 23344 322 1 1112222133456666665432255555555 4667776543
No 418
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.20 E-value=0.0057 Score=64.48 Aligned_cols=60 Identities=13% Similarity=0.036 Sum_probs=43.2
Q ss_pred ceeeCCCCCEEEEEEE-----cCCCcEEEEEEEECCCCceeccCc-c--------ceeeeEEEecCCCEEEEEE
Q 004839 128 LSEVSPDHKFLAYTMY-----DKDNDYFTLSVRNLNSGALCSKPQ-A--------VRVSNIAWAKDGQALIYVV 187 (728)
Q Consensus 128 ~~~~SPDG~~lA~~~~-----~~g~e~~~l~v~dl~tg~~~~~~~-~--------~~~~~~~WspDg~~l~y~~ 187 (728)
.+.+||||++|..... ..|.....|.++|+++++.+.... . .....+.+||||++||.+.
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan 142 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFL 142 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEc
Confidence 5789999998866532 123445679999999998765422 1 2346899999999887764
No 419
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.19 E-value=0.02 Score=66.72 Aligned_cols=114 Identities=12% Similarity=0.068 Sum_probs=74.0
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCc--eeccC--ccceeeeEEEecC--CCEEEEEEecCCCCcceeE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA--LCSKP--QAVRVSNIAWAKD--GQALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~--~~~~~--~~~~~~~~~WspD--g~~l~y~~~~~~~~~~~v~ 198 (728)
.+..+.|||||++||... .+| .|+|+|+.++. ..... ....+..+.|+|+ ++.|+....+ ..|.
T Consensus 11 ~V~~l~~s~dg~~latg~-~dg----~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~ 80 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCS-SDK----TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVL 80 (753)
T ss_dssp CEEEECCCSSSCCEEEEE-TTT----EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SCEE
T ss_pred eeEEEEECCCCCeEEEEE-CCC----cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----CeEE
Confidence 567788999999998774 455 38899987543 22211 1346788999998 8877665432 3577
Q ss_pred EEECCCCC-ceeEEeeecCcceEEEEEEcCC--CCEEEEEEcCCCceEEEEEeCCCC
Q 004839 199 CSIIGSTD-EDALLLEESNENVYVNIRHTKD--FHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 199 ~~~l~t~~-~~~lv~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
..++.++. .....+... ......+.|+|+ |+.|+..+.+ ..|.+.|+.++
T Consensus 81 vwd~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~l~sgs~d---g~I~vwdl~~~ 133 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSD---GKVSVVEFKEN 133 (753)
T ss_dssp EEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT---SEEEEEECCSS
T ss_pred EEECCCCcccccccccCC-CCCeEEEEECCCCCCCEEEEEeCC---CcEEEEEeecC
Confidence 77776653 122222222 223456899999 8888766543 36888888764
No 420
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.18 E-value=0.13 Score=52.02 Aligned_cols=199 Identities=7% Similarity=0.032 Sum_probs=104.1
Q ss_pred EeeceeeCCC--CCEEEEEEEcCCCcEEEEEEEECCCCceeccC----ccceeeeEEEecC--CCEEEEEEecCCCCcce
Q 004839 125 YEELSEVSPD--HKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP----QAVRVSNIAWAKD--GQALIYVVTDQNKRPYQ 196 (728)
Q Consensus 125 ~~~~~~~SPD--G~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~----~~~~~~~~~WspD--g~~l~y~~~~~~~~~~~ 196 (728)
.+..+.|||+ |++||-.. .+| .|+|+|+++++..... ....+..++|+|| |+.|+-...+ ..
T Consensus 55 ~V~~v~~s~~~~g~~l~s~s-~D~----~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~ 124 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILASCS-YDG----KVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-----GK 124 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEE-TTT----EEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SE
T ss_pred CeEEEEecCCCcCCEEEEEc-CCC----EEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----Cc
Confidence 4667789874 88887664 455 3999999988532221 1345788999998 7766554322 36
Q ss_pred eEEEECCCCC-ceeEEeeecCcceEEEEEEcCC-------------CCEEEEEEcCCCceEEEEEeCCCCCCCeEE---e
Q 004839 197 IYCSIIGSTD-EDALLLEESNENVYVNIRHTKD-------------FHFVCVHTFSTTSSKVFLINAADPFSGLTL---I 259 (728)
Q Consensus 197 v~~~~l~t~~-~~~lv~~~~~~~~~~~~~~SpD-------------g~~l~~~~~~~~~~~l~~~dl~~~~~~~~~---l 259 (728)
|.+.++.++. .....+.... .....+.|+|+ +++|+..+.+ . .|.+.|+.++...... +
T Consensus 125 v~~wd~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D-~--~v~lwd~~~~~~~~~~~~~l 200 (297)
T 2pm7_B 125 VSVVEFKENGTTSPIIIDAHA-IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-N--LVKIWKYNSDAQTYVLESTL 200 (297)
T ss_dssp EEEEEBCSSSCBCCEEEECCS-SCEEEEEECCCC------------CCEEEEEETT-S--CEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEecCCCceeeeeeeccc-CccceEeecCCcccccccCCCCCCcceEEEEcCC-C--cEEEEEEcCCCceEEEEEEe
Confidence 7777876653 2122332222 22346788987 4555544432 2 3555565542221111 2
Q ss_pred eecCCce-EEEEeecC--CEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeE-Eee-cCCCceEEEEEeeC-CEEEE
Q 004839 260 WECEGLA-HCIVEHHE--GFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWES-VFI-DDQGLVVEDVDFCK-THMAL 333 (728)
Q Consensus 260 ~~~~~~~-~~~~~~dg--~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-li~-~~~~~~i~~~~~~~-~~lv~ 333 (728)
......+ ...+++++ +.+++....++ ..+|+.+.-. ...|.. ++. ......+..+.+.. +.+++
T Consensus 201 ~~H~~~V~~v~~sp~~~~~~~las~s~D~------~v~iWd~~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~g~~la 270 (297)
T 2pm7_B 201 EGHSDWVRDVAWSPTVLLRSYMASVSQDR------TCIIWTQDNE----QGPWKKTLLKEEKFPDVLWRASWSLSGNVLA 270 (297)
T ss_dssp CCCSSCEEEEEECCCCSSSEEEEEEETTS------CEEEEEESST----TSCCEEEESSSSCCSSCEEEEEECSSSCCEE
T ss_pred cCCCCceEEEEECCCCCCceEEEEEECCC------cEEEEEeCCC----CCccceeeeecccCCCcEEEEEECCCCCEEE
Confidence 1122222 23445664 34444444443 2556654321 123432 221 12233456666654 44556
Q ss_pred EEecCCeeEEEEEe
Q 004839 334 ILREGRTYRLCSVS 347 (728)
Q Consensus 334 ~~~~~g~~~l~~~~ 347 (728)
....++.-+|+..+
T Consensus 271 s~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 271 LSGGDNKVTLWKEN 284 (297)
T ss_dssp EEETTSCEEEEEEC
T ss_pred EEcCCCcEEEEEEC
Confidence 66677766666554
No 421
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.16 E-value=0.27 Score=50.51 Aligned_cols=177 Identities=7% Similarity=-0.022 Sum_probs=106.2
Q ss_pred EEEEEEECCCCc--eec-cCccceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCc-eeEEeeecCcceEEEEEE
Q 004839 150 FTLSVRNLNSGA--LCS-KPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE-DALLLEESNENVYVNIRH 225 (728)
Q Consensus 150 ~~l~v~dl~tg~--~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~-~~lv~~~~~~~~~~~~~~ 225 (728)
..|+.+|++++. ... +........++|.+.+..||++-. ...+|++.++.+... ..++..... .-.++++
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~----~~~~I~r~~~~g~~~~~~~~~~~l~--~p~glav 86 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV----SEEAIKRTEFNKTESVQNVVVSGLL--SPDGLAC 86 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEET----TTTEEEEEETTSSSCCCEEEEECCS--CCCEEEE
T ss_pred CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEEC----CCCcEEEEEccCCCceEEEEcCCCC--CccEEEE
Confidence 469999998874 111 111234567899998888998742 234799999876542 233322211 1234677
Q ss_pred cCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-C-ceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCC
Q 004839 226 TKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-G-LAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDAS 303 (728)
Q Consensus 226 SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~-~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~ 303 (728)
.+.+..|+++... ...|.++++++ ...+.+.... . .....+++.++.||+..... +.+|++++.+ .
T Consensus 87 d~~~g~ly~~d~~--~~~I~~~~~dG--~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~-------~~~I~r~~~d-G 154 (318)
T 3sov_A 87 DWLGEKLYWTDSE--TNRIEVSNLDG--SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE-------VPKIERAGMD-G 154 (318)
T ss_dssp ETTTTEEEEEETT--TTEEEEEETTS--CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSS-------SCEEEEEETT-S
T ss_pred EcCCCeEEEEECC--CCEEEEEECCC--CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCC-------CCEEEEEEcC-C
Confidence 7778888887653 35789999876 2334443222 1 12235567778888764322 2569998876 1
Q ss_pred CCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCC
Q 004839 304 FPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 304 ~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
..-+.++.. .-....++.++ ++.||+.... ..+|.+++++.
T Consensus 155 ---~~~~~~~~~-~l~~Pnglavd~~~~~lY~aD~~--~~~I~~~d~dG 197 (318)
T 3sov_A 155 ---SSRFIIINS-EIYWPNGLTLDYEEQKLYWADAK--LNFIHKSNLDG 197 (318)
T ss_dssp ---CSCEEEECS-SCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTS
T ss_pred ---CCeEEEEEC-CCCCccEEEEeccCCEEEEEECC--CCEEEEEcCCC
Confidence 222333332 22345677776 5788888654 34788888764
No 422
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.15 E-value=0.36 Score=51.89 Aligned_cols=190 Identities=6% Similarity=-0.031 Sum_probs=101.9
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEe--cCCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWA--KDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~Ws--pDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.+..+.|+||+ +|+-. ..+|. |.++|+.+++...... ...+..+.|+ +|++.|+....+ ..|...
T Consensus 164 ~V~~l~~~~~~-~l~s~-s~dg~----i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d-----~~i~vw 232 (464)
T 3v7d_B 164 GVWALKYAHGG-ILVSG-STDRT----VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD-----NTLHVW 232 (464)
T ss_dssp CEEEEEECSTT-EEEEE-ETTSC----EEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT-----SCEEEE
T ss_pred CEEEEEEcCCC-EEEEE-eCCCC----EEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC-----CcEEEe
Confidence 56778899999 45443 45554 9999999997654322 3456777888 466655554322 356677
Q ss_pred ECCCCCcee----------------------EEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeE-
Q 004839 201 IIGSTDEDA----------------------LLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLT- 257 (728)
Q Consensus 201 ~l~t~~~~~----------------------lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~- 257 (728)
++.+..... ........ . -..+++++++|+..+.+. .|.+.|+.+ ++..
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--v~~~~~~~~~l~~~~~d~---~i~vwd~~~--~~~~~ 304 (464)
T 3v7d_B 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA-S--VRTVSGHGNIVVSGSYDN---TLIVWDVAQ--MKCLY 304 (464)
T ss_dssp ECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS-C--EEEEEEETTEEEEEETTS---CEEEEETTT--TEEEE
T ss_pred eCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc-e--EEEEcCCCCEEEEEeCCC---eEEEEECCC--CcEEE
Confidence 776543110 01111111 1 124578899887766543 588889876 3332
Q ss_pred EeeecCCce-EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEe
Q 004839 258 LIWECEGLA-HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILR 336 (728)
Q Consensus 258 ~l~~~~~~~-~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~ 336 (728)
.+......+ ...+++++..++..+..+ . |...++. . ......+. .....+..+.+.++. ++...
T Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~sg~~dg-------~--i~vwd~~-~---~~~~~~~~-~h~~~v~~~~~~~~~-l~s~s 369 (464)
T 3v7d_B 305 ILSGHTDRIYSTIYDHERKRCISASMDT-------T--IRIWDLE-N---GELMYTLQ-GHTALVGLLRLSDKF-LVSAA 369 (464)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTS-------C--EEEEETT-T---TEEEEEEC-CCSSCEEEEEECSSE-EEEEE
T ss_pred EecCCCCCEEEEEEcCCCCEEEEEeCCC-------c--EEEEECC-C---CcEEEEEe-CCCCcEEEEEEcCCE-EEEEe
Confidence 222222222 234567777666544322 2 4444443 1 11111122 223456667766554 44545
Q ss_pred cCCeeEEEEEecCC
Q 004839 337 EGRTYRLCSVSLPL 350 (728)
Q Consensus 337 ~~g~~~l~~~~l~~ 350 (728)
.+| .+.++++.+
T Consensus 370 ~dg--~v~vwd~~~ 381 (464)
T 3v7d_B 370 ADG--SIRGWDAND 381 (464)
T ss_dssp TTS--EEEEEETTT
T ss_pred CCC--cEEEEECCC
Confidence 555 366677654
No 423
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.14 E-value=0.031 Score=60.17 Aligned_cols=200 Identities=9% Similarity=0.012 Sum_probs=108.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCC----------ceecc-Cc-cceeeeEEEecCCCEEEEEEecCCC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSG----------ALCSK-PQ-AVRVSNIAWAKDGQALIYVVTDQNK 192 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg----------~~~~~-~~-~~~~~~~~WspDg~~l~y~~~~~~~ 192 (728)
.+..++|+|++..+.++...+|. |+|+|+.+. +.... .. ...+..++|+|+++.++++...
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~----V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~--- 202 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSD----VLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD--- 202 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSC----EEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT---
T ss_pred cEEEEEECCCCCcEEEEECCCCc----EEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC---
Confidence 46778899985545455445554 999999762 21111 11 2356789999999844444332
Q ss_pred CcceeEEEECCCCCc-e-----eEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCC--CCeEEeeecCC
Q 004839 193 RPYQIYCSIIGSTDE-D-----ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPF--SGLTLIWECEG 264 (728)
Q Consensus 193 ~~~~v~~~~l~t~~~-~-----~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~--~~~~~l~~~~~ 264 (728)
...|.+.++.++.. . ...+... ......+.|+|++..++++... ...|++.|+.++. .....+.....
T Consensus 203 -dg~i~vwd~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~s~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 203 -DHTICLWDINATPKEHRVIDAKNIFTGH-TAVVEDVAWHLLHESLFGSVAD--DQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp -TSCEEEEETTSCCBGGGEEECSEEECCC-SSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred -CCeEEEEeCCCCCCCCceeccceeecCC-CCCEeeeEEeCCCCCEEEEEeC--CCeEEEEECCCCCCCcceeEeecCCC
Confidence 33688888876421 1 1122222 2234568999955545444433 2468888987642 12333333333
Q ss_pred ce-EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC--CEEEEEEecCCee
Q 004839 265 LA-HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK--THMALILREGRTY 341 (728)
Q Consensus 265 ~~-~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~--~~lv~~~~~~g~~ 341 (728)
.+ ...+++++..+++....++ .|...++. .. ......+.. ....+..+.+.. +.+++....++.
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg--------~v~vwd~~-~~-~~~~~~~~~--h~~~v~~i~~sp~~~~~l~s~~~d~~- 345 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADK--------TVALWDLR-NL-KLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRR- 345 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTS--------EEEEEETT-CT-TSCSEEEEC--CSSCEEEEEECSSCTTEEEEEETTSC-
T ss_pred CeEEEEeCCCCCCEEEEEeCCC--------eEEEEeCC-CC-CCCeEEeec--CCCCEEEEEECCCCCCEEEEEeCCCc-
Confidence 32 2345677776666555443 24444544 21 112233322 234566777664 457777777765
Q ss_pred EEEEEecC
Q 004839 342 RLCSVSLP 349 (728)
Q Consensus 342 ~l~~~~l~ 349 (728)
|.++++.
T Consensus 346 -i~iwd~~ 352 (430)
T 2xyi_A 346 -LHVWDLS 352 (430)
T ss_dssp -CEEEEGG
T ss_pred -EEEEeCC
Confidence 4455554
No 424
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.09 E-value=0.15 Score=58.59 Aligned_cols=195 Identities=9% Similarity=-0.039 Sum_probs=104.9
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCcee------ccCc-cceeeeEEEecCCCEEEEEEecCCCCccee
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALC------SKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQI 197 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~------~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v 197 (728)
.+..++++||+..+..+...+| .|+++|+.++... .+.. ...+..++|+|||+.|+-...+ ..|
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D~----~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D-----g~v 454 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRDK----SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD-----GEL 454 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETTS----EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SEE
T ss_pred eeEEEEecCCCCCEEEEEeCCC----cEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC-----CcE
Confidence 4677889998755555555555 4999999875321 1111 3456789999999977655332 368
Q ss_pred EEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC----ce-EEEEee
Q 004839 198 YCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG----LA-HCIVEH 272 (728)
Q Consensus 198 ~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~----~~-~~~~~~ 272 (728)
.+.|+.++... ..+..... ....+.|+|||++|+..+.+. .|.+.|+.+ .....+..... .+ ...+++
T Consensus 455 ~vwd~~~~~~~-~~~~~h~~-~v~~~~~s~~~~~l~s~s~D~---~i~iwd~~~--~~~~~~~~~~~~h~~~v~~~~~~~ 527 (694)
T 3dm0_A 455 RLWDLAAGVST-RRFVGHTK-DVLSVAFSLDNRQIVSASRDR---TIKLWNTLG--ECKYTISEGGEGHRDWVSCVRFSP 527 (694)
T ss_dssp EEEETTTTEEE-EEEECCSS-CEEEEEECTTSSCEEEEETTS---CEEEECTTS--CEEEEECSSTTSCSSCEEEEEECS
T ss_pred EEEECCCCcce-eEEeCCCC-CEEEEEEeCCCCEEEEEeCCC---EEEEEECCC--CcceeeccCCCCCCCcEEEEEEeC
Confidence 88898876422 22222222 245689999999887555432 466667654 22222222111 11 123445
Q ss_pred cCC-EEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecCC
Q 004839 273 HEG-FLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 273 dg~-~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
++. .+++....++ ..+|+ ++. . ......+.. ....+..+.+.. +.+++....+|. |.++|+.+
T Consensus 528 ~~~~~~l~s~s~d~------~v~vw--d~~-~---~~~~~~~~~-h~~~v~~v~~spdg~~l~sg~~Dg~--i~iwd~~~ 592 (694)
T 3dm0_A 528 NTLQPTIVSASWDK------TVKVW--NLS-N---CKLRSTLAG-HTGYVSTVAVSPDGSLCASGGKDGV--VLLWDLAE 592 (694)
T ss_dssp CSSSCEEEEEETTS------CEEEE--ETT-T---CCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSB--CEEEETTT
T ss_pred CCCcceEEEEeCCC------eEEEE--ECC-C---CcEEEEEcC-CCCCEEEEEEeCCCCEEEEEeCCCe--EEEEECCC
Confidence 542 2333333332 23444 443 1 122222222 234566777664 355666666664 45566654
No 425
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.06 E-value=0.007 Score=62.80 Aligned_cols=58 Identities=17% Similarity=0.040 Sum_probs=44.1
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEE--ecCCCEEEEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAW--AKDGQALIYVV 187 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~W--spDg~~l~y~~ 187 (728)
.+..+.|||||++|+... .+| .|+++|+.+++...... ...+..+.| +||++.|+...
T Consensus 88 ~v~~~~~~~~~~~l~s~~-~dg----~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 148 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTAS-CDK----TAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGS 148 (368)
T ss_dssp CEEEEEECTTSSEEEEEE-TTS----EEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEE
T ss_pred CEEEEEECcCCCEEEEEc-CCC----cEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEcc
Confidence 467788999999998763 454 49999999998666433 456788999 89987676654
No 426
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.06 E-value=0.081 Score=52.27 Aligned_cols=190 Identities=7% Similarity=-0.007 Sum_probs=103.8
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 204 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t 204 (728)
..++.++ || .|..+.-. .....|.++|+++|+.+.... ........-+++++.||... ++...++.+|..+
T Consensus 45 tqGL~~~-~~-~LyestG~--~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~lt----w~~~~v~v~D~~t 116 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGL--NGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLT----WKNGLGFVWNIRN 116 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEE--TTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEE----SSSSEEEEEETTT
T ss_pred cceEEEE-CC-EEEEECCC--CCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEE----eeCCEEEEEECcc
Confidence 3455677 65 44333222 335789999999999766433 22333333555678887663 4556899999988
Q ss_pred CC-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE----EEEeecCCEEEE
Q 004839 205 TD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH----CIVEHHEGFLYL 279 (728)
Q Consensus 205 ~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~----~~~~~dg~~l~~ 279 (728)
.+ ..++-+. . .. ..+++||+.|+++. .++.|+.+|.++.+ ....+.-...+.. -.++..++++|.
T Consensus 117 ~~~~~ti~~~-~-eG----~glt~dg~~L~~Sd---Gs~~i~~iDp~T~~-v~~~I~V~~~g~~~~~lNELe~~~G~lya 186 (262)
T 3nol_A 117 LRQVRSFNYD-G-EG----WGLTHNDQYLIMSD---GTPVLRFLDPESLT-PVRTITVTAHGEELPELNELEWVDGEIFA 186 (262)
T ss_dssp CCEEEEEECS-S-CC----CCEEECSSCEEECC---SSSEEEEECTTTCS-EEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred CcEEEEEECC-C-Cc----eEEecCCCEEEEEC---CCCeEEEEcCCCCe-EEEEEEeccCCccccccceeEEECCEEEE
Confidence 76 3333332 1 22 24568999877653 25789999998732 2222222111111 012223567775
Q ss_pred EEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeec-----------CCCceEEEEEeeC--CEEEEEEecCCeeEEEEE
Q 004839 280 FTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFID-----------DQGLVVEDVDFCK--THMALILREGRTYRLCSV 346 (728)
Q Consensus 280 ~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~-----------~~~~~i~~~~~~~--~~lv~~~~~~g~~~l~~~ 346 (728)
-.... -.|+++|.+ + ++....+.- .....+.+++... +.|+++-. .-+.++.+
T Consensus 187 n~w~~--------~~I~vIDp~-t---G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK--~Wp~~~ev 252 (262)
T 3nol_A 187 NVWQT--------NKIVRIDPE-T---GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK--LWPKVFEI 252 (262)
T ss_dssp EETTS--------SEEEEECTT-T---CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET--TCSEEEEE
T ss_pred EEccC--------CeEEEEECC-C---CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC--CCCceEEE
Confidence 44332 258888765 2 222211211 1134577888774 56665533 24556555
Q ss_pred e
Q 004839 347 S 347 (728)
Q Consensus 347 ~ 347 (728)
.
T Consensus 253 ~ 253 (262)
T 3nol_A 253 T 253 (262)
T ss_dssp E
T ss_pred E
Confidence 4
No 427
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.05 E-value=0.021 Score=59.72 Aligned_cols=108 Identities=10% Similarity=0.079 Sum_probs=66.7
Q ss_pred eeCCCCCEEEEEE-EcCCCcEEEEEEEECCCCc-----------------eeccCc-cceeeeEEEecCCCEEEEEEecC
Q 004839 130 EVSPDHKFLAYTM-YDKDNDYFTLSVRNLNSGA-----------------LCSKPQ-AVRVSNIAWAKDGQALIYVVTDQ 190 (728)
Q Consensus 130 ~~SPDG~~lA~~~-~~~g~e~~~l~v~dl~tg~-----------------~~~~~~-~~~~~~~~WspDg~~l~y~~~~~ 190 (728)
.+|| +++|+.. ..+| .|+++|+.+++ ...... ...+..++|+|||+.|+-...+
T Consensus 144 ~~s~--~~la~~sg~~~g----~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d- 216 (355)
T 3vu4_A 144 EFSN--GLLVYSNEFNLG----QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQD- 216 (355)
T ss_dssp EEET--TEEEEEESSCTT----CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETT-
T ss_pred EEEc--cEEEEeCCCcCc----EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCC-
Confidence 4455 6677752 2333 38999999875 121211 3467889999999977665432
Q ss_pred CCCcce-eEEEECCCCCceeEEeeec-CcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCC
Q 004839 191 NKRPYQ-IYCSIIGSTDEDALLLEES-NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 191 ~~~~~~-v~~~~l~t~~~~~lv~~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
.. |...|+.+++. ...+... .......+.|||||++|+..+.+ ..|.+.|+..+
T Consensus 217 ----~~~v~iwd~~~~~~-~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d---~~v~iw~~~~~ 272 (355)
T 3vu4_A 217 ----GTIIRVFKTEDGVL-VREFRRGLDRADVVDMKWSTDGSKLAVVSDK---WTLHVFEIFND 272 (355)
T ss_dssp ----CSEEEEEETTTCCE-EEEEECTTCCSCEEEEEECTTSCEEEEEETT---CEEEEEESSCC
T ss_pred ----CCEEEEEECCCCcE-EEEEEcCCCCCcEEEEEECCCCCEEEEEECC---CEEEEEEccCC
Confidence 24 77788887652 2223311 22334678999999998766654 35777787653
No 428
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.05 E-value=0.23 Score=57.76 Aligned_cols=198 Identities=8% Similarity=-0.025 Sum_probs=116.6
Q ss_pred eceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCc----eeccC--ccceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 127 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA----LCSKP--QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 127 ~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~----~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
..+.+++.+++|.|+ +.... .|+.+++.+.. ...+. .......++..+.++.||++-. ...+|++.
T Consensus 427 ~gl~~d~~~~~lY~s-D~~~~---~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~----~~~~I~v~ 498 (791)
T 3m0c_C 427 VALDTEVASNRIYWS-DLSQR---MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----VLGTVSVA 498 (791)
T ss_dssp EEEEEETTTTEEEEE-ETTTT---EEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET----TTTEEEEE
T ss_pred EEEeecccCCeeEEe-eccce---eEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEec----CCCeEEEE
Confidence 456678877777555 55433 47788887531 11111 1234567788888888988742 23489999
Q ss_pred ECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-C-ceEEEEeecCCEEE
Q 004839 201 IIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-G-LAHCIVEHHEGFLY 278 (728)
Q Consensus 201 ~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~-~~~~~~~~dg~~l~ 278 (728)
++......+++..... .-.++++.|.+.+|+|+.... ...|+++++++ ...+.+.... . .....+++.++.||
T Consensus 499 ~ldG~~~~~l~~~~l~--~P~gIaVDp~~g~LYwtD~g~-~~~I~~~~~dG--~~~~~lv~~~l~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 499 DTKGVKRKTLFRENGS--KPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLY 573 (791)
T ss_dssp ETTSSSEEEEEECTTC--CEEEEEEETTTTEEEEEECSS-SCEEEEEETTS--CCEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred eCCCCeEEEEEeCCCC--CcceEEEecCCCCEEEecCCC-CCeEEEEecCC--CceEEEEeCCCCCceEEEEecCCCeEE
Confidence 9876543333322211 234678899988998876432 35799999976 3344444322 1 12345667788888
Q ss_pred EEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCC-CceEEEEEeeCCEEEEEEecCCeeEEEEEecCCC
Q 004839 279 LFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQ-GLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 279 ~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~-~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
+.-.. +.+|.+++++ . ...+.++.... -....++++++++||++...+ ..|.+++..++
T Consensus 574 waD~~--------~~~I~~~d~d-G---~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~--~~I~~~dk~tG 633 (791)
T 3m0c_C 574 WVDSK--------LHSISSIDVN-G---GNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN--EAIFSANRLTG 633 (791)
T ss_dssp EEETT--------TTEEEEEETT-S---CSCEEEEECTTTTSSEEEEEEETTEEEEEETTT--TEEEEEETTTC
T ss_pred EEeCC--------CCcEEEEecC-C---CceEEEecCCCccCCCCEEEEeCCEEEEEECCC--CEEEEEeCCCC
Confidence 86432 2468888876 1 23344443211 123457888899888887544 46777775544
No 429
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.04 E-value=0.15 Score=52.45 Aligned_cols=225 Identities=11% Similarity=0.069 Sum_probs=118.0
Q ss_pred EEEEEcC--CCcEEEEEEEECCCCceeccCc-------c-ceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCce
Q 004839 139 AYTMYDK--DNDYFTLSVRNLNSGALCSKPQ-------A-VRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDED 208 (728)
Q Consensus 139 A~~~~~~--g~e~~~l~v~dl~tg~~~~~~~-------~-~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~~ 208 (728)
+|..+.+ |.+...|.++|.++++...... . .....+.. ++..||.+... ...|.++|..+.+..
T Consensus 4 ~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~~----~~~v~viD~~t~~~~ 77 (328)
T 3dsm_A 4 LFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVNN----SHVIFAIDINTFKEV 77 (328)
T ss_dssp EEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEGG----GTEEEEEETTTCCEE
T ss_pred EEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEcC----CCEEEEEECcccEEE
Confidence 4555554 3334679999999998654221 0 11233444 45677776542 347999999887632
Q ss_pred eEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeE-EeeecC------CceEEEEeecCCEEEEEE
Q 004839 209 ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLT-LIWECE------GLAHCIVEHHEGFLYLFT 281 (728)
Q Consensus 209 ~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~-~l~~~~------~~~~~~~~~dg~~l~~~t 281 (728)
..+ ..... -..+.+++|| .|++.... ...|+++|+++ .+.. .+.-.. ......+ +++++|+..
T Consensus 78 ~~i-~~~~~--p~~i~~~~~g-~lyv~~~~--~~~v~~iD~~t--~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~ 147 (328)
T 3dsm_A 78 GRI-TGFTS--PRYIHFLSDE-KAYVTQIW--DYRIFIINPKT--YEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNC 147 (328)
T ss_dssp EEE-ECCSS--EEEEEEEETT-EEEEEEBS--CSEEEEEETTT--TEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEE
T ss_pred EEc-CCCCC--CcEEEEeCCC-eEEEEECC--CCeEEEEECCC--CeEEEEEEcCCccccCCCcceEEE--ECCEEEEEc
Confidence 222 21121 2346778898 56665532 35799999987 3332 222111 1111122 678887764
Q ss_pred cCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCC--------eeEEEEEecCCCC
Q 004839 282 DAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGR--------TYRLCSVSLPLPA 352 (728)
Q Consensus 282 n~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g--------~~~l~~~~l~~~~ 352 (728)
.... ..|..++.+ . .+....+... ....++.... +.+++....+. ...|+++|..+++
T Consensus 148 ~~~~-------~~v~viD~~-t---~~~~~~i~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~ 214 (328)
T 3dsm_A 148 WSYQ-------NRILKIDTE-T---DKVVDELTIG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT 214 (328)
T ss_dssp CTTC-------CEEEEEETT-T---TEEEEEEECS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE
T ss_pred CCCC-------CEEEEEECC-C---CeEEEEEEcC--CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe
Confidence 3111 357777765 1 2222222221 1223444443 56666544320 2578999876532
Q ss_pred CCcceeecccccccccCCC--ceeeeecCCCccCCCcEEEEEEccCCCCceEEEEECCCCeE
Q 004839 353 GKGVVHLKELHPHFLPLPK--YVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKW 412 (728)
Q Consensus 353 ~~~~~~~~~~~~~~~~~p~--~~~~i~~~~~~~~~~~~~~~~~ss~~~p~~~~~~~~~~~~~ 412 (728)
+. ..+.+|. ....+ .++.+++.+.+. .+ .++.+|.++++.
T Consensus 215 ------v~----~~~~~~~g~~p~~l----a~~~d~~~lyv~-~~-----~v~~~d~~t~~~ 256 (328)
T 3dsm_A 215 ------VE----KQFKFKLGDWPSEV----QLNGTRDTLYWI-NN-----DIWRMPVEADRV 256 (328)
T ss_dssp ------EE----EEEECCTTCCCEEE----EECTTSCEEEEE-SS-----SEEEEETTCSSC
T ss_pred ------EE----EEEecCCCCCceeE----EEecCCCEEEEE-cc-----EEEEEECCCCce
Confidence 11 1233332 12222 234556655443 33 899999988764
No 430
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.03 E-value=0.12 Score=52.60 Aligned_cols=142 Identities=15% Similarity=0.051 Sum_probs=79.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.|||||++|+-.. .+| .|++++...+....... ........|+++++.|+....+ ..+...++
T Consensus 88 ~V~~~~~s~dg~~l~s~~-~d~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-----~~~~~~d~ 157 (340)
T 4aow_A 88 FVSDVVISSDGQFALSGS-WDG----TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-----KTIKLWNT 157 (340)
T ss_dssp CEEEEEECTTSSEEEEEE-TTS----EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECT
T ss_pred CEEEEEECCCCCEEEEEc-ccc----cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC-----CeEEEEEe
Confidence 467788999999998763 444 38899998876554322 3355678899999877655332 24566666
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEE-EEEEcCCCceEEEEEeCCCCCCCeEEeeec-CCceE-EEEeecCCEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFV-CVHTFSTTSSKVFLINAADPFSGLTLIWEC-EGLAH-CIVEHHEGFLYL 279 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l-~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~-~~~~~-~~~~~dg~~l~~ 279 (728)
...... .............+.+++++... ++....+ ..|.+.|+.+ ......... ...+. ..+++++..|+.
T Consensus 158 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d--~~i~i~d~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s 232 (340)
T 4aow_A 158 LGVCKY-TVQDESHSEWVSCVRFSPNSSNPIIVSCGWD--KLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSPDGSLCAS 232 (340)
T ss_dssp TSCEEE-EECSSSCSSCEEEEEECSCSSSCEEEEEETT--SCEEEEETTT--TEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCceE-EEEeccccCcccceEEccCCCCcEEEEEcCC--CEEEEEECCC--CceeeEecCCCCcEEEEEECCCCCEEEE
Confidence 543221 12111112223446778877543 3333322 3477888876 333222222 22222 245677776554
Q ss_pred EE
Q 004839 280 FT 281 (728)
Q Consensus 280 ~t 281 (728)
.+
T Consensus 233 ~s 234 (340)
T 4aow_A 233 GG 234 (340)
T ss_dssp EE
T ss_pred Ee
Confidence 33
No 431
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.00 E-value=0.052 Score=55.61 Aligned_cols=111 Identities=8% Similarity=-0.053 Sum_probs=69.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCC---------CceeccCc-cceeeeEEEecCCCEEEEEEecCCCCc
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS---------GALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRP 194 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~t---------g~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~ 194 (728)
.+..+.|+| +++|+... .+| .|+++|+.+ ++.+.... ...+..+.|+||+ |+... . .
T Consensus 103 ~v~~l~~~~-~~~l~s~~-~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~-~----d 169 (342)
T 1yfq_A 103 GICRICKYG-DDKLIAAS-WDG----LIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGM-N----N 169 (342)
T ss_dssp CEEEEEEET-TTEEEEEE-TTS----EEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEE-S----T
T ss_pred ceEEEEeCC-CCEEEEEc-CCC----eEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEe-C----C
Confidence 466788999 88887764 444 489999887 65443322 4567889999987 44442 2 2
Q ss_pred ceeEEEECCC-CCceeEEeeecCcceEEEEEEcC-CCCEEEEEEcCCCceEEEEEeCCC
Q 004839 195 YQIYCSIIGS-TDEDALLLEESNENVYVNIRHTK-DFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 195 ~~v~~~~l~t-~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
..|..+++.+ ..................+.++| |+++|+..+.. ..+.+.+++.
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d---g~i~i~~~~~ 225 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSID---GRVAVEFFDD 225 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETT---SEEEEEECCT
T ss_pred CeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecC---CcEEEEEEcC
Confidence 3788889877 43211122222222345688999 99988776653 2455555544
No 432
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=97.00 E-value=0.0041 Score=67.34 Aligned_cols=140 Identities=14% Similarity=0.013 Sum_probs=79.0
Q ss_pred EEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHH----------------HHHHHHCCeEEEEE
Q 004839 468 EQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSE----------------LKSLLDRGWVVAFA 531 (728)
Q Consensus 468 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~----------------~~~l~~~Gy~v~~~ 531 (728)
..=.++-.++..+..+++..+. . ....|+++++|||||.+....+..+ ...| .+-..++.+
T Consensus 22 ~sGyv~v~~~~~lfy~f~~s~~-~-~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw-~~~~~~lfi 98 (452)
T 1ivy_A 22 YSGYLKSSGSKHLHYWFVESQK-D-PENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSW-NLIANVLYL 98 (452)
T ss_dssp EEEEEECSTTEEEEEEEECCSS-C-GGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCG-GGSSEEEEE
T ss_pred eEEEEeeCCCCeEEEEEEEcCC-C-CCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcc-cccccEEEE
Confidence 3333444456777777654432 2 2347999999999996532111000 0011 134679999
Q ss_pred cC-CCCCCCCCccccccccC-CCCCcHHHHHHH-HHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHh----CCCceeEEE
Q 004839 532 DV-RGGGGGGKKWHHDGRRT-KKLNSIKDFISC-ARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC----CPDLFRAVV 604 (728)
Q Consensus 532 d~-RG~g~~G~~~~~~~~~~-~~~~~~~D~~~~-~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~----~p~~f~a~v 604 (728)
|. +|.|-+ .. ...... ......+|+... .+|+...+....+++.|.|.||||..+..++.. .+-.+++++
T Consensus 99 DqP~GtGfS-~~--~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ 175 (452)
T 1ivy_A 99 ESPAGVGFS-YS--DDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLA 175 (452)
T ss_dssp CCSTTSTTC-EE--SSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred ecCCCCCcC-Cc--CCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEE
Confidence 95 676632 11 110000 001123344333 334444334456789999999999966655532 345689999
Q ss_pred EeCCcccch
Q 004839 605 LEVPFLDAT 613 (728)
Q Consensus 605 ~~~p~~d~~ 613 (728)
+..|++|..
T Consensus 176 ign~~~d~~ 184 (452)
T 1ivy_A 176 VGNGLSSYE 184 (452)
T ss_dssp EESCCSBHH
T ss_pred ecCCccChh
Confidence 999998753
No 433
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.96 E-value=0.2 Score=55.48 Aligned_cols=267 Identities=13% Similarity=0.057 Sum_probs=135.8
Q ss_pred eeeCC-----CCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc---cceeeeEEE-e-cCCCEEEEEEecCC-------
Q 004839 129 SEVSP-----DHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAW-A-KDGQALIYVVTDQN------- 191 (728)
Q Consensus 129 ~~~SP-----DG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~W-s-pDg~~l~y~~~~~~------- 191 (728)
+.+|. ||++| |..+..++ .|.++|+++.+...+.. ......+++ + ||++++|.......
T Consensus 90 ~~~s~t~g~~DG~~l-fVnd~~~~---rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~ 165 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFL-FMNDKANT---RVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGT 165 (595)
T ss_dssp EEEEEETTEEEEEEE-EEEETTTT---EEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSS
T ss_pred cccCCCCCCcCCCEE-EEEcCCCC---EEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCc
Confidence 55676 99987 44455443 48999999998555322 234556776 5 99999866632110
Q ss_pred ------CCcceeEEEECCCCC-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCc-----------------------
Q 004839 192 ------KRPYQIYCSIIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTS----------------------- 241 (728)
Q Consensus 192 ------~~~~~v~~~~l~t~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~----------------------- 241 (728)
.....+-.+|..+.+ ..++.... ++. .+..||||+++++++.....
T Consensus 166 ~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd---~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~ 241 (595)
T 1fwx_A 166 NMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLD---NCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI 241 (595)
T ss_dssp STTCGGGEEEEEEEEETTTTEEEEEEEESS-CCC---CEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH
T ss_pred ccccccccCceEEEEECCCCeEEEEEEeCC-Ccc---ceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccce
Confidence 112357778887754 22222211 222 35789999999998854310
Q ss_pred ------------eEEEEEeCCCCC-CC-eEEeeecCCceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCC--
Q 004839 242 ------------SKVFLINAADPF-SG-LTLIWECEGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFP-- 305 (728)
Q Consensus 242 ------------~~l~~~dl~~~~-~~-~~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~-- 305 (728)
+.|.++|.++.. .. ...+.-........+++||+++|+ ++...+ .|..++++ ...
T Consensus 242 ~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V-~~~~s~-------~VsVid~~-~~~~~ 312 (595)
T 1fwx_A 242 EKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCV-AGKLSP-------TVTVLDVT-RFDAV 312 (595)
T ss_dssp HHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEE-ECTTSS-------BEEEEEGG-GHHHH
T ss_pred eEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEE-eCCCCC-------eEEEEECc-ccccc
Confidence 236677776511 12 233333333344567889887665 454432 34444443 100
Q ss_pred ---C--CCCeEEeecCCCceEEEEEeeCC-EEEEEEecCCeeEEEEEecCCCC----C-CcceeecccccccccC---CC
Q 004839 306 ---S--RTWESVFIDDQGLVVEDVDFCKT-HMALILREGRTYRLCSVSLPLPA----G-KGVVHLKELHPHFLPL---PK 371 (728)
Q Consensus 306 ---~--~~~~~li~~~~~~~i~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~~~----~-~~~~~~~~~~~~~~~~---p~ 371 (728)
. ..-..+.....+.....+...++ .+|+..- -.+++.+++++.+. | +....+ ..++. |+
T Consensus 313 ~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~--ldsqV~kwdi~~a~~~~~g~~~~~vi-----~kidV~yqpG 385 (595)
T 1fwx_A 313 FYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLF--LDSQVVKWNIEDAIRAYAGEKVDPIK-----DKLDVHYQPG 385 (595)
T ss_dssp HHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEET--TTTEEEEEEHHHHHHHHHTCSCCCEE-----EEEECSSCEE
T ss_pred cccccCcccceEEEcCCCCCcceEEECCCCeEEEEEe--cCCcEEEEEhhHhhhhhcccccceeE-----EEeecccccc
Confidence 0 00011111122344555555543 4444433 33566667765310 0 000001 11221 11
Q ss_pred ceeeeecCCCccCCCcEEEEEE--c-------cCCCCceEEEEECCCCeEEEEEeecc
Q 004839 372 YVSQIVPGPNYDYYSSTMRFAI--S-------SPVMPDAVVDYDLSYGKWNIIQQQNM 420 (728)
Q Consensus 372 ~~~~i~~~~~~~~~~~~~~~~~--s-------s~~~p~~~~~~~~~~~~~~~l~~~~~ 420 (728)
..+ ...+...+.|++.+...- + .|.+|..--.+|..+++++++.....
T Consensus 386 h~~-~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~ 442 (595)
T 1fwx_A 386 HLK-TVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPT 442 (595)
T ss_dssp EEE-ETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEE
T ss_pred cce-eccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEcC
Confidence 111 112334566776654322 1 24566666778888888888776543
No 434
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.95 E-value=0.18 Score=50.85 Aligned_cols=195 Identities=11% Similarity=0.017 Sum_probs=100.7
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCcc------------------------------------
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA------------------------------------ 168 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~------------------------------------ 168 (728)
.+..+.|||||++||-.. .+| .|.++|+++++.+.....
T Consensus 69 ~V~~v~~~~~~~~l~sgs-~Dg----~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~ 143 (318)
T 4ggc_A 69 YISSVAWIKEGNYLAVGT-SSA----EVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHV 143 (318)
T ss_dssp CEEEEEECTTSSEEEEEE-TTS----EEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred eEEEEEECCCCCEEEEEE-CCC----cEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeE
Confidence 467788999999998764 444 489999999875432110
Q ss_pred -------ceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCc-ee-EEeeecCcceEEEEEEcCCCCEEEEEEcCC
Q 004839 169 -------VRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE-DA-LLLEESNENVYVNIRHTKDFHFVCVHTFST 239 (728)
Q Consensus 169 -------~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~-~~-lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 239 (728)
.......|+++++.|+.... ...|.+.|+.+++. .. .............+.++|++..++......
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 218 (318)
T 4ggc_A 144 ATLSGHSQEVCGLRWAPDGRHLASGGN-----DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 218 (318)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEET-----TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT
T ss_pred EEEcCccCceEEEEEcCCCCEEEEEec-----CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecC
Confidence 01123344455544433221 12455566655431 11 111111111234567888887776665544
Q ss_pred CceEEEEEeCCCCCCCeEEeeecC-CceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCC
Q 004839 240 TSSKVFLINAADPFSGLTLIWECE-GLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQG 318 (728)
Q Consensus 240 ~~~~l~~~dl~~~~~~~~~l~~~~-~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~ 318 (728)
....|.+.|.... ......... ......+.++++.++..+.... ..|...++. . ......+ .. ..
T Consensus 219 ~~~~i~lwd~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d-------~~i~iwd~~-~--~~~~~~l-~g-H~ 284 (318)
T 4ggc_A 219 SDRHIRIWNVCSG--ACLSAVDAHSQVCSILWSPHYKELISGHGFAQ-------NQLVIWKYP-T--MAKVAEL-KG-HT 284 (318)
T ss_dssp TTCEEEEEETTTC--CEEEEEECSSCEEEEEEETTTTEEEEEECTTT-------CCEEEEETT-T--CCEEEEE-CC-CS
T ss_pred CCCEEEEEecccc--cccccccceeeeeeeeecccccceEEEEEcCC-------CEEEEEECC-C--CcEEEEE-cC-CC
Confidence 4566778887763 232222222 2233455677777777654321 224444444 1 1222222 22 23
Q ss_pred ceEEEEEeeC-CEEEEEEecCCeeEE
Q 004839 319 LVVEDVDFCK-THMALILREGRTYRL 343 (728)
Q Consensus 319 ~~i~~~~~~~-~~lv~~~~~~g~~~l 343 (728)
..+..+.+.. +.+++....+|.-+|
T Consensus 285 ~~V~~l~~spdg~~l~S~s~D~~v~i 310 (318)
T 4ggc_A 285 SRVLSLTMSPDGATVASAAADETLRL 310 (318)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEE
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEE
Confidence 4577777764 445666667765444
No 435
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.92 E-value=0.03 Score=69.07 Aligned_cols=144 Identities=13% Similarity=0.017 Sum_probs=89.1
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..++|||||++||... .+|. |.|+|+.+++.+.... ...+..++|+|||+.|+.... ...|...|+
T Consensus 617 ~v~~~~~s~~~~~l~s~~-~d~~----i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-----d~~v~vwd~ 686 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCG-ADKT----LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA-----DKKVKIWDS 686 (1249)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSC----EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-----TSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEe-CCCe----EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC-----CCeEEEEEC
Confidence 467788999999998764 4553 9999999998654322 456788999999998876542 236888899
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce-EEEEeecCCEEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEGFLYLFT 281 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~~~~dg~~l~~~t 281 (728)
.+++. ...+..... ....+.|+|++...++.+.+. ...|.+.|+.++. ....+......+ ...++++++.|+..+
T Consensus 687 ~~~~~-~~~~~~~~~-~v~~~~~~~~~~~~~l~sg~~-d~~v~vwd~~~~~-~~~~~~~h~~~v~~~~~sp~~~~l~s~s 762 (1249)
T 3sfz_A 687 ATGKL-VHTYDEHSE-QVNCCHFTNKSNHLLLATGSN-DFFLKLWDLNQKE-CRNTMFGHTNSVNHCRFSPDDELLASCS 762 (1249)
T ss_dssp TTCCE-EEEEECCSS-CEEEEEECSSSSCCEEEEEET-TSCEEEEETTSSS-EEEEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred CCCce-EEEEcCCCC-cEEEEEEecCCCceEEEEEeC-CCeEEEEECCCcc-hhheecCCCCCEEEEEEecCCCEEEEEE
Confidence 87752 222332222 345678999755433322211 2357888887732 222332222332 234567777666554
Q ss_pred c
Q 004839 282 D 282 (728)
Q Consensus 282 n 282 (728)
.
T Consensus 763 ~ 763 (1249)
T 3sfz_A 763 A 763 (1249)
T ss_dssp S
T ss_pred C
Confidence 4
No 436
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.91 E-value=0.013 Score=59.40 Aligned_cols=150 Identities=9% Similarity=0.045 Sum_probs=84.6
Q ss_pred eeceeeCCCCCEEEEEEEcC-C-------------CcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecC
Q 004839 126 EELSEVSPDHKFLAYTMYDK-D-------------NDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQ 190 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~-g-------------~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~ 190 (728)
...+.++|||+.++ + +.. | .....|+.++.+ |+...... ......++|+|||+.| ++..
T Consensus 117 ~~~i~~d~~G~l~v-t-d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~-- 190 (296)
T 3e5z_A 117 PNDVCLAPDGSLWF-S-DPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDT-- 190 (296)
T ss_dssp CCCEEECTTSCEEE-E-ECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEET--
T ss_pred CCCEEECCCCCEEE-E-CCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeC--
Confidence 34578999998443 2 210 0 011258888887 65443322 2345679999999988 6532
Q ss_pred CCCcceeEEEECC-CCCc--eeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE
Q 004839 191 NKRPYQIYCSIIG-STDE--DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH 267 (728)
Q Consensus 191 ~~~~~~v~~~~l~-t~~~--~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~ 267 (728)
....|+++++. ++.. ...++ ........++.+++||+ |++.. ...|+++|.++ .....+........
T Consensus 191 --~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~-l~v~~----~~~v~~~~~~g--~~~~~~~~~~~~~~ 260 (296)
T 3e5z_A 191 --GDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGL-IWASA----GDGVHVLTPDG--DELGRVLTPQTTSN 260 (296)
T ss_dssp --TTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSC-EEEEE----TTEEEEECTTS--CEEEEEECSSCCCE
T ss_pred --CCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCC-EEEEc----CCeEEEECCCC--CEEEEEECCCCcee
Confidence 23478998886 3221 12233 22221223468899998 44444 34689999864 23334432222222
Q ss_pred EEE-eecCCEEEEEEcCCccCCCCCceEEEEeeCC
Q 004839 268 CIV-EHHEGFLYLFTDAAKEGQEADNHYLLRCPVD 301 (728)
Q Consensus 268 ~~~-~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~ 301 (728)
..+ +++++.||+.++. .|++++..
T Consensus 261 ~~f~~~d~~~L~v~t~~----------~l~~~~~~ 285 (296)
T 3e5z_A 261 LCFGGPEGRTLYMTVST----------EFWSIETN 285 (296)
T ss_dssp EEEESTTSCEEEEEETT----------EEEEEECS
T ss_pred EEEECCCCCEEEEEcCC----------eEEEEEcc
Confidence 334 3677788887652 27777665
No 437
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.89 E-value=0.37 Score=48.55 Aligned_cols=198 Identities=6% Similarity=-0.046 Sum_probs=101.8
Q ss_pred eeceeeCCCCCEEEEE------EEcCCCcEEEEEEEECCCCceeccCc------cceeeeEEEecCCCEEEEEEecCCCC
Q 004839 126 EELSEVSPDHKFLAYT------MYDKDNDYFTLSVRNLNSGALCSKPQ------AVRVSNIAWAKDGQALIYVVTDQNKR 193 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~------~~~~g~e~~~l~v~dl~tg~~~~~~~------~~~~~~~~WspDg~~l~y~~~~~~~~ 193 (728)
...+.|+|||+.++.+ .... ..|+++|+++|+...... ......+.+++|+..|+++..
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~----~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~----- 90 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPA----GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM----- 90 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEEC----CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-----
T ss_pred ccCceECCCCCEEEEEeccccCCCCC----CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-----
Confidence 4567799999744330 1112 248999998888654322 134567899999334666532
Q ss_pred cceeEEEECCCCCceeEEeeecC---cceEEEEEEcCCCCEEEEEEcCC-------------CceEEEEEeCCCCCCCeE
Q 004839 194 PYQIYCSIIGSTDEDALLLEESN---ENVYVNIRHTKDFHFVCVHTFST-------------TSSKVFLINAADPFSGLT 257 (728)
Q Consensus 194 ~~~v~~~~l~t~~~~~lv~~~~~---~~~~~~~~~SpDg~~l~~~~~~~-------------~~~~l~~~dl~~~~~~~~ 257 (728)
...|++++.. ++...+...... .....++.+++||+. ++..... ....||++|.+ ++..
T Consensus 91 ~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l-~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---g~~~ 165 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNL-WITAPAGEVAPADYTRSMQEKFGSIYCFTTD---GQMI 165 (314)
T ss_dssp TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCE-EEEECBCBCTTSCCCBTTSSSCEEEEEECTT---SCEE
T ss_pred CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCE-EEEecCcccccccccccccCCCCeEEEECCC---CCEE
Confidence 1268999887 432211011111 112245788999974 4444321 12579999875 2343
Q ss_pred EeeecCC-ceEEEEe----ecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCC---eEEee-cCCC-ceEEEEEee
Q 004839 258 LIWECEG-LAHCIVE----HHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTW---ESVFI-DDQG-LVVEDVDFC 327 (728)
Q Consensus 258 ~l~~~~~-~~~~~~~----~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~li~-~~~~-~~i~~~~~~ 327 (728)
.+..... .....++ ++|+.+|+..... ..|++++.+ . .+.. +.+.. .... ..+.++.+.
T Consensus 166 ~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~--------~~i~~~~~~-~--~g~~~~~~~~~~~~~~~~~~p~~i~~d 234 (314)
T 1pjx_A 166 QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPT--------KKLWSYDIK-G--PAKIENKKVWGHIPGTHEGGADGMDFD 234 (314)
T ss_dssp EEEEEESSEEEEEEEECTTSCEEEEEEEETTT--------TEEEEEEEE-E--TTEEEEEEEEEECCCCSSCEEEEEEEB
T ss_pred EeccCCCCcceEEEecccCCCCCEEEEEECCC--------CeEEEEECC-C--CCccccceEEEECCCCCCCCCCceEEC
Confidence 3332211 1223455 6666666654332 235555532 1 0111 11111 1111 345666666
Q ss_pred C-CEEEEEEecCCeeEEEEEecCC
Q 004839 328 K-THMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 328 ~-~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
. +.+++....++ .|.+++..+
T Consensus 235 ~~G~l~v~~~~~~--~i~~~d~~~ 256 (314)
T 1pjx_A 235 EDNNLLVANWGSS--HIEVFGPDG 256 (314)
T ss_dssp TTCCEEEEEETTT--EEEEECTTC
T ss_pred CCCCEEEEEcCCC--EEEEEcCCC
Confidence 4 46666654433 577787653
No 438
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.86 E-value=0.24 Score=52.70 Aligned_cols=176 Identities=7% Similarity=0.014 Sum_probs=106.1
Q ss_pred EEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCC----CceeEEeeecCcceEEEEEE
Q 004839 151 TLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGST----DEDALLLEESNENVYVNIRH 225 (728)
Q Consensus 151 ~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~----~~~~lv~~~~~~~~~~~~~~ 225 (728)
.|+.++++++....+.. ......++|.+++..||++-.. ..+|+++++... ....++.... ..-.++++
T Consensus 93 ~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~----~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glav 166 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS----QRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAV 166 (400)
T ss_dssp EEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETT----TTEEEEEEC------CCCEEEECSSC--SCEEEEEE
T ss_pred eeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecC----CCeEEEEEcccCCCCCcceEEEeCCC--CCcccEEE
Confidence 48999999876544332 3466789999988899997432 347999988652 1223332121 12345677
Q ss_pred cCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-C-ceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCC
Q 004839 226 TKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-G-LAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDAS 303 (728)
Q Consensus 226 SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~-~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~ 303 (728)
.+.++.|++.... ...|.++++++ ...+.+.... . .....+++.++.||+..... +.+|++++.+ .
T Consensus 167 D~~~~~lY~~d~~--~~~I~~~~~~g--~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~-------~~~I~~~~~d-G 234 (400)
T 3p5b_L 167 DWIHSNIYWTDSV--LGTVSVADTKG--VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-------PAKIKKGGLN-G 234 (400)
T ss_dssp ETTTTEEEEEETT--TTEEEEECTTT--CSEEEEEECSSCCEEEEEEETTTTEEEEEECSS-------SCCEEEEETT-S
T ss_pred EecCCceEEEECC--CCeEEEEeCCC--CceEEEEeCCCCCcceEEEecccCeEEEEeCCC-------CCEEEEEeCC-C
Confidence 7777788887653 34789999976 3344444322 2 12335667788888764332 2468888876 1
Q ss_pred CCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCC
Q 004839 304 FPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 304 ~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
..-+.++.. .-....++.++ ++.||+.... ..+|.+++++.
T Consensus 235 ---~~~~~~~~~-~l~~P~glavd~~~~~lY~aD~~--~~~I~~~d~dG 277 (400)
T 3p5b_L 235 ---VDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSK--LHSISSIDVNG 277 (400)
T ss_dssp ---CSCEEEECS-SCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTS
T ss_pred ---CccEEEEEC-CCCceEEEEEEeCCCEEEEEECC--CCEEEEEeCCC
Confidence 222334332 22456677776 5788888654 35788888764
No 439
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.84 E-value=0.21 Score=53.29 Aligned_cols=112 Identities=13% Similarity=-0.001 Sum_probs=70.4
Q ss_pred eeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceec-c----C-ccceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 129 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS-K----P-QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 129 ~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~-~----~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
+.|+|||+.|..+ +..+.. .|++++.+++.... . . .......++++|++..||++ +. ..+|+++++
T Consensus 176 ia~~~~g~~l~~~-d~~~~~--~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~--d~---~~~I~~~d~ 247 (409)
T 3hrp_A 176 PAVTKDKQRVYSI-GWEGTH--TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV--DS---NKNFGRFNV 247 (409)
T ss_dssp CEECTTSSEEEEE-BSSTTC--EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE--CT---TCEEEEEET
T ss_pred eeEecCCCcEEEE-ecCCCc--eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE--EC---CCcEEEEEC
Confidence 7899999977555 554432 58999998775422 1 1 12345678999976678773 22 347999998
Q ss_pred CCCCceeEEe---eecCcceE-E-EEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 203 GSTDEDALLL---EESNENVY-V-NIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 203 ~t~~~~~lv~---~~~~~~~~-~-~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
.++.. .++. ........ . ++.++|++..|++.... ...|++++.++
T Consensus 248 ~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~--~~~I~~~~~~g 298 (409)
T 3hrp_A 248 KTQEV-TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN--LSSVYKITPDG 298 (409)
T ss_dssp TTCCE-EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT--TTEEEEECTTC
T ss_pred CCCCE-EEEecccccCCCCCCccccEEEeCCCCEEEEEeCC--CCEEEEEecCC
Confidence 77642 2220 11111111 2 67899987788776543 35799998764
No 440
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.83 E-value=0.4 Score=54.23 Aligned_cols=198 Identities=12% Similarity=0.004 Sum_probs=122.7
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
...+.++++++.|.++ |.... .|+..+++++....+.. .....+++..+.++.||++-. ...+|.+.++.
T Consensus 39 ~~~l~~d~~~~~lywt-D~~~~---~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~----~~~~I~v~~~d 110 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWT-DISLK---TISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT----GTNRIEVSKLD 110 (628)
T ss_dssp EEEEEEETTTTEEEEE-ETTTT---EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET----TTTEEEEEETT
T ss_pred eEEEEEECCCCEEEEE-ECCCC---eEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEEC----CCCEEEEEecC
Confidence 3456789988888666 65443 48888988764333222 224556777777888988732 23589999987
Q ss_pred CCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC-ceEEEEeecCCEEEEEEc
Q 004839 204 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG-LAHCIVEHHEGFLYLFTD 282 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~-~~~~~~~~dg~~l~~~tn 282 (728)
......++..... .-.++++.|...+|+++... ....|+++++++ ...+.+..... .....+++++++||+.-.
T Consensus 111 G~~~~~l~~~~l~--~P~~iavdp~~G~lY~tD~g-~~~~I~r~~~dG--~~~~~l~~~~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 111 GQHRQVLVWKDLD--SPRALALDPAEGFMYWTEWG-GKPKIDRAAMDG--SERTTLVPNVGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp STTCEEEECSSCC--CEEEEEEETTTTEEEEEECS-SSCEEEEEETTS--CSCEEEECSCSSEEEEEEETTTTEEEEEET
T ss_pred CCcEEEEEeCCCC--CcccEEEccCCCeEEEeCCC-CCCEEEEEeCCC--CceEEEECCCCCcceEEEccccCEEEEEEC
Confidence 5543333322222 22467888888888887653 256899999986 34445443222 123456777888888643
Q ss_pred CCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCCCC
Q 004839 283 AAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPA 352 (728)
Q Consensus 283 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~ 352 (728)
.. ..|.+++++ . ....++... -....++++++++||++...++ .|.+++..+++
T Consensus 186 ~~--------~~I~~~d~d-G----~~~~v~~~~-l~~P~glav~~~~ly~tD~~~~--~I~~~dk~tg~ 239 (628)
T 4a0p_A 186 DT--------NLIESSNML-G----LNREVIADD-LPHPFGLTQYQDYIYWTDWSRR--SIERANKTSGQ 239 (628)
T ss_dssp TT--------TEEEEEETT-S----CSCEEEEEC-CSCEEEEEEETTEEEEEETTTT--EEEEEETTTCC
T ss_pred CC--------CEEEEEcCC-C----CceEEeecc-CCCceEEEEECCEEEEecCCCC--EEEEEECCCCC
Confidence 32 468888876 2 122344332 2345688888999888875443 57777765543
No 441
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.83 E-value=0.082 Score=54.47 Aligned_cols=148 Identities=7% Similarity=0.006 Sum_probs=83.8
Q ss_pred EeeceeeCCCCCEEEEEEEcC--CCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDK--DNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 201 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~--g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~ 201 (728)
.+..+.++|||+.. ++.... ......||.+| +|+...... ......++|+|||+.||++... ...|++++
T Consensus 135 ~~~~i~~d~~G~l~-v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~----~~~I~~~d 207 (326)
T 2ghs_A 135 RSNDGRMHPSGALW-IGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTK----VNRLMRVP 207 (326)
T ss_dssp EEEEEEECTTSCEE-EEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETT----TCEEEEEE
T ss_pred CCCCEEECCCCCEE-EEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECC----CCEEEEEE
Confidence 56678899999844 432211 01134689998 565443322 2234578999999999887422 34799999
Q ss_pred CC--CC-C-c-eeEEeeec-CcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCc-eEEEEe-ec
Q 004839 202 IG--ST-D-E-DALLLEES-NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL-AHCIVE-HH 273 (728)
Q Consensus 202 l~--t~-~-~-~~lv~~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~-~~~~~~-~d 273 (728)
+. ++ . . ...+.... ......++.+++||+ |++.... ...|+++|.++ .....+...... ....++ ++
T Consensus 208 ~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~--~~~v~~~d~~g--~~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 208 LDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWG--EGAVDRYDTDG--NHIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp BCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEET--TTEEEEECTTC--CEEEEEECSCSBEEEEEEESTT
T ss_pred cccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeC--CCEEEEECCCC--CEEEEEECCCCCcEEEEEecCC
Confidence 85 44 3 1 12222111 112234678899997 4444322 24689998843 223333322222 223444 67
Q ss_pred CCEEEEEEcCC
Q 004839 274 EGFLYLFTDAA 284 (728)
Q Consensus 274 g~~l~~~tn~~ 284 (728)
++.||+.++..
T Consensus 283 ~~~L~vt~~~~ 293 (326)
T 2ghs_A 283 ASRLLVTSARE 293 (326)
T ss_dssp SCEEEEEEBCT
T ss_pred CCEEEEEecCC
Confidence 78888877654
No 442
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.80 E-value=0.58 Score=47.89 Aligned_cols=193 Identities=13% Similarity=0.086 Sum_probs=98.6
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCce--ec-c--C-ccceeeeEEEecCCCEEEEEEecCCCCcceeE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGAL--CS-K--P-QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~--~~-~--~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~ 198 (728)
.+..+.|||| +||-. ..+|. |+++|+.++.. .. . . ....+..++|+||++.|+-...+ ..|.
T Consensus 16 ~v~~~~~s~~--~las~-~~D~~----i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D-----~~v~ 83 (330)
T 2hes_X 16 KIWSFDFSQG--ILATG-STDRK----IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD-----STVS 83 (330)
T ss_dssp CEEEEEEETT--EEEEE-ESSSC----EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT-----SCEE
T ss_pred ceeeeccCCC--EEEEE-cCCCE----EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC-----CcEE
Confidence 4556778988 56554 34554 89999988642 21 1 1 13357789999999977665433 2455
Q ss_pred EEECCCCC------ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEE---eeecCCceE-E
Q 004839 199 CSIIGSTD------EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTL---IWECEGLAH-C 268 (728)
Q Consensus 199 ~~~l~t~~------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~---l~~~~~~~~-~ 268 (728)
+.++.... .....+.... .....+.|+|||++|+..+.+. .|.+.|+.......+. +......+. .
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~sp~g~~las~s~D~---~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v 159 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHE-NEVKGVAWSNDGYYLATCSRDK---SVWIWETDESGEEYECISVLQEHSQDVKHV 159 (330)
T ss_dssp EEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTS---CEEEEECCTTCCCCEEEEEECCCSSCEEEE
T ss_pred EEEcccCcCccccceeEEEEcCCC-CcEEEEEECCCCCEEEEEeCCC---EEEEEeccCCCCCeEEEEEeccCCCceEEE
Confidence 55653321 1111222222 2345689999999887655433 4777787432112222 222222222 3
Q ss_pred EEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEee-cCCCceEEEEEeeCC---EEEEEEecCCeeEEE
Q 004839 269 IVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFI-DDQGLVVEDVDFCKT---HMALILREGRTYRLC 344 (728)
Q Consensus 269 ~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~-~~~~~~i~~~~~~~~---~lv~~~~~~g~~~l~ 344 (728)
.+++++..|+-.+. ++ ..+|+.... ..++.+.. ......+..+.+..+ .+++....++.-+++
T Consensus 160 ~~~p~~~~l~s~s~-D~------~i~iW~~~~------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw 226 (330)
T 2hes_X 160 IWHPSEALLASSSY-DD------TVRIWKDYD------DDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226 (330)
T ss_dssp EECSSSSEEEEEET-TS------CEEEEEEET------TEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEE
T ss_pred EECCCCCEEEEEcC-CC------eEEEEECCC------CCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEE
Confidence 44577765554333 32 255665431 12222111 122334555655543 456666677765555
Q ss_pred EE
Q 004839 345 SV 346 (728)
Q Consensus 345 ~~ 346 (728)
-+
T Consensus 227 ~~ 228 (330)
T 2hes_X 227 KY 228 (330)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 443
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.77 E-value=0.37 Score=49.39 Aligned_cols=118 Identities=11% Similarity=0.032 Sum_probs=69.5
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCc---------------------EEEEEEEECCCCceeccCc---cceeeeEEEecCC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDND---------------------YFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDG 180 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e---------------------~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg 180 (728)
.+..++++|||+.++. +..+.. ...|+++|.++|+.+.... ......++++|||
T Consensus 25 ~v~~va~d~~G~l~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIF--HRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CEEEEEECTTCCEEEE--ECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred CceEEEECCCCCEEEE--eCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 5777889999986643 333310 0259999999998754322 2245678999999
Q ss_pred CEEEEEEecCCCCcceeEEEECCCCCceeEEeee--------cCcceEEEEEEcC-CCCEEEEEEcCCCceEEEEEeCCC
Q 004839 181 QALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEE--------SNENVYVNIRHTK-DFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 181 ~~l~y~~~~~~~~~~~v~~~~l~t~~~~~lv~~~--------~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
+ ||++.. ....|++++..........+.. ..-..-.++.++| +|+ |++... .....|+++|.++
T Consensus 103 ~-l~v~d~----~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~-~~~~~I~~~~~~g 175 (329)
T 3fvz_A 103 N-YWVTDV----ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDG-YCNSRIVQFSPSG 175 (329)
T ss_dssp C-EEEEET----TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEEC-SSCCEEEEECTTS
T ss_pred C-EEEEEC----CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeC-CCCCeEEEEcCCC
Confidence 8 666532 2347888887543211222211 1111235688999 555 555442 1235788888543
No 444
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.75 E-value=0.26 Score=57.30 Aligned_cols=176 Identities=6% Similarity=0.003 Sum_probs=105.0
Q ss_pred EEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCC---ceeEEeeecCcceEEEEEEcC
Q 004839 152 LSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD---EDALLLEESNENVYVNIRHTK 227 (728)
Q Consensus 152 l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~---~~~lv~~~~~~~~~~~~~~Sp 227 (728)
|+.+++.+++...+.. ......++|.+.+..||++... ..+|++.++.... ....+... ....-.++++.+
T Consensus 406 Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~----~~~I~~~~l~g~~~~~~~~~vi~~-~l~~P~GLAvD~ 480 (791)
T 3m0c_C 406 VRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS----QRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDW 480 (791)
T ss_dssp EEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT----TTEEEEEEC--------CEEEECS-SCSCCCEEEEET
T ss_pred eeEeeccCCcceeeecCCCceEEEeecccCCeeEEeecc----ceeEEEEeccCCCCCcceeEEEec-CCCCcceeeeee
Confidence 7888888776544332 3456788999988889887432 3479999886521 12223221 111123577888
Q ss_pred CCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-C-ceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCC
Q 004839 228 DFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-G-LAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFP 305 (728)
Q Consensus 228 Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~-~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~ 305 (728)
.++.|+++... ...|+++++++ ...+.+.... . .....+++.++.||+..... +.+|.+++++ .
T Consensus 481 ~~~~LY~tD~~--~~~I~v~~ldG--~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~-------~~~I~~~~~d-G-- 546 (791)
T 3m0c_C 481 IHSNIYWTDSV--LGTVSVADTKG--VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-------PAKIKKGGLN-G-- 546 (791)
T ss_dssp TTTEEEEEETT--TTEEEEEETTS--SSEEEEEECTTCCEEEEEEETTTTEEEEEECSS-------SCEEEEEETT-S--
T ss_pred cCCcEEEEecC--CCeEEEEeCCC--CeEEEEEeCCCCCcceEEEecCCCCEEEecCCC-------CCeEEEEecC-C--
Confidence 89889887653 35799999986 3344444322 2 22345667778888764322 2468888876 1
Q ss_pred CCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCC
Q 004839 306 SRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 306 ~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
...+.++. ..-....++.+. ++.||++... ..+|.+++++.
T Consensus 547 -~~~~~lv~-~~l~~P~GLavD~~~~~LYwaD~~--~~~I~~~d~dG 589 (791)
T 3m0c_C 547 -VDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSK--LHSISSIDVNG 589 (791)
T ss_dssp -CCEEEEEC-SSCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTS
T ss_pred -CceEEEEe-CCCCCceEEEEecCCCeEEEEeCC--CCcEEEEecCC
Confidence 22233443 222446677766 5788888644 35788888764
No 445
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.74 E-value=0.28 Score=49.52 Aligned_cols=244 Identities=7% Similarity=-0.013 Sum_probs=119.8
Q ss_pred EEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCC---ceeEEeeecCcceEEEEE
Q 004839 150 FTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD---EDALLLEESNENVYVNIR 224 (728)
Q Consensus 150 ~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~---~~~lv~~~~~~~~~~~~~ 224 (728)
.+++++|+.+++...+.. ..+.......-+++-+++.-.+.......++++|+.+.. -..+ -..+.+.......
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~-~~~p~~r~~~~~~ 109 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSV-APMNVRRGLAGAT 109 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEE-CCCSSCCBSCEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEEC-CCCCCCccceeEE
Confidence 458899999887655432 222222233345543333322222234579999987764 2222 2222222222222
Q ss_pred EcCCCCEEEEEEcCC---CceEEEEEeCCCCCCCeEEeeecCCce-EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeC
Q 004839 225 HTKDFHFVCVHTFST---TSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPV 300 (728)
Q Consensus 225 ~SpDg~~l~~~~~~~---~~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~ 300 (728)
. -+++ |++..... ..++++++|+.+ .++..+.+..... .......++.+|++.-.+... ....++..+.
T Consensus 110 ~-~~~~-lyv~GG~~~~~~~~~~~~~d~~~--~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~~d~ 182 (301)
T 2vpj_A 110 T-LGDM-IYVSGGFDGSRRHTSMERYDPNI--DQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLN---ILNSVEKYDP 182 (301)
T ss_dssp E-ETTE-EEEECCBCSSCBCCEEEEEETTT--TEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSC---BCCCEEEEET
T ss_pred E-ECCE-EEEEcccCCCcccceEEEEcCCC--CeEEECCCCCCCcccceEEEECCEEEEECCCCCCc---ccceEEEEeC
Confidence 2 2454 44443222 136899999987 4566554332211 111122356788775433211 1235777776
Q ss_pred CCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCC---eeEEEEEecCCCCCCcceeecccccccccCCCceeeee
Q 004839 301 DASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGR---TYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIV 377 (728)
Q Consensus 301 ~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g---~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~i~ 377 (728)
. ...|+.+-+......-......++.|+++--.++ ...+..+|+.+.. +... ..++.|....++.
T Consensus 183 ~----~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~------W~~~--~~~p~~r~~~~~~ 250 (301)
T 2vpj_A 183 H----TGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS------WTTV--TSMTTPRCYVGAT 250 (301)
T ss_dssp T----TTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE------EEEE--CCCSSCCBSCEEE
T ss_pred C----CCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc------EEEC--CCCCCcccceeEE
Confidence 5 4678876322112222234455788888865443 3468888876432 2211 1122222211111
Q ss_pred cCCCccCCCcEEEEEEccCCC-CceEEEEECCCCeEEEEEee
Q 004839 378 PGPNYDYYSSTMRFAISSPVM-PDAVVDYDLSYGKWNIIQQQ 418 (728)
Q Consensus 378 ~~~~~~~~~~~~~~~~ss~~~-p~~~~~~~~~~~~~~~l~~~ 418 (728)
..++..+++...+... -..++.||+++++++.+...
T Consensus 251 -----~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 287 (301)
T 2vpj_A 251 -----VLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSM 287 (301)
T ss_dssp -----EETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEE
T ss_pred -----EECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCC
Confidence 1233322332222222 25889999999999877543
No 446
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.69 E-value=0.052 Score=58.62 Aligned_cols=116 Identities=11% Similarity=0.135 Sum_probs=73.9
Q ss_pred EeeceeeCCC-CCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEE
Q 004839 125 YEELSEVSPD-HKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 201 (728)
Q Consensus 125 ~~~~~~~SPD-G~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~ 201 (728)
.+..++|+|+ +++||-. ..+|. |+++|+.++....... ...+..++|+|||+.|+....+ ..|..+|
T Consensus 151 ~V~~v~~~p~~~~~las~-s~Dg~----v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d-----g~v~iwd 220 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVC-LADGS----IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN-----GTVVQYL 220 (434)
T ss_dssp SEEEEEECSSCTTEEEEE-ETTSC----EEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT-----SCEEEEC
T ss_pred ceEEEEECCCCCCEEEEE-ECCCe----EEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC-----CcEEEEc
Confidence 4677899998 6777665 45554 9999999885432211 3467889999999988766432 3577778
Q ss_pred CCCCCceeEEe-eec----CcceEEEEEEcCCCCEEEEEEcCCC----ceEEEEEeCCC
Q 004839 202 IGSTDEDALLL-EES----NENVYVNIRHTKDFHFVCVHTFSTT----SSKVFLINAAD 251 (728)
Q Consensus 202 l~t~~~~~lv~-~~~----~~~~~~~~~~SpDg~~l~~~~~~~~----~~~l~~~dl~~ 251 (728)
+. +.....+. ... .......+.|++++.+++......+ ...++++++..
T Consensus 221 ~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 221 PT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp TT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred cC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 76 22111111 110 1113467899999988876665432 24577777765
No 447
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.061 Score=62.59 Aligned_cols=114 Identities=8% Similarity=0.062 Sum_probs=74.7
Q ss_pred EeeceeeCCC--CCEEEEEEEcCCCcEEEEEEEECCCCceec---cC-ccceeeeEEEecC--CCEEEEEEecCCCCcce
Q 004839 125 YEELSEVSPD--HKFLAYTMYDKDNDYFTLSVRNLNSGALCS---KP-QAVRVSNIAWAKD--GQALIYVVTDQNKRPYQ 196 (728)
Q Consensus 125 ~~~~~~~SPD--G~~lA~~~~~~g~e~~~l~v~dl~tg~~~~---~~-~~~~~~~~~WspD--g~~l~y~~~~~~~~~~~ 196 (728)
.+..+.|||+ |++|+... .+|. |+++|+.+++... .. ....+..+.|+|+ ++.|+.... ...
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s-~Dg~----I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~-----dg~ 124 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCS-YDGK----VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS-----DGK 124 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEE-TTSC----EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-----TSE
T ss_pred ceEEEEecCCCCCCEEEEEe-CCCe----EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC-----CCc
Confidence 5677889998 99888774 5564 9999999986222 11 1446788999999 887766643 236
Q ss_pred eEEEECCCCC-ceeEEeeecCcceEEEEEEcC-------------CCCEEEEEEcCCCceEEEEEeCCCC
Q 004839 197 IYCSIIGSTD-EDALLLEESNENVYVNIRHTK-------------DFHFVCVHTFSTTSSKVFLINAADP 252 (728)
Q Consensus 197 v~~~~l~t~~-~~~lv~~~~~~~~~~~~~~Sp-------------Dg~~l~~~~~~~~~~~l~~~dl~~~ 252 (728)
|..+++.++. ......... ......+.|+| |+++|+..+.++ .|.+.|+.++
T Consensus 125 I~vwdl~~~~~~~~~~~~~~-~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg---~I~iwd~~~~ 190 (753)
T 3jro_A 125 VSVVEFKENGTTSPIIIDAH-AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN---LVKIWKYNSD 190 (753)
T ss_dssp EEEEECCSSSCCCCEEEECC-SSCEEEEEECCCC---------CGGGCCEEEEETTS---CEEEEEEETT
T ss_pred EEEEEeecCCCcceeEeecC-CCceEEEEecCcccccccccccCCCCCEEEEEECCC---eEEEEeccCC
Confidence 8888887663 222222222 22345678898 588777665533 4777777653
No 448
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.17 Score=54.02 Aligned_cols=144 Identities=19% Similarity=0.188 Sum_probs=81.9
Q ss_pred EeeceeeCC-CCCEEEEEEEcCCCcEEEEEEEECCC---CceeccC----ccceeeeEEEecCCCEEEEEEecCCCCcce
Q 004839 125 YEELSEVSP-DHKFLAYTMYDKDNDYFTLSVRNLNS---GALCSKP----QAVRVSNIAWAKDGQALIYVVTDQNKRPYQ 196 (728)
Q Consensus 125 ~~~~~~~SP-DG~~lA~~~~~~g~e~~~l~v~dl~t---g~~~~~~----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 196 (728)
.+..++||| ||++||-.. .+| .|+|+|+.+ +...... ....+..++|+||++.|+....+ ..
T Consensus 65 ~V~~~~~s~~~~~~l~s~s-~dg----~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----g~ 134 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGS-DQG----VIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKD-----GQ 134 (437)
T ss_dssp CEEEEEEECSSSCEEEEEE-TTS----EEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETT-----SE
T ss_pred ceEEEEECCCCCCEEEEec-CCc----eEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCC-----CE
Confidence 577889999 999998774 444 499999877 5422111 13467889999999977765432 24
Q ss_pred eEEEECC---CCCcee---------EEeeec-CcceEEEE--EEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeee
Q 004839 197 IYCSIIG---STDEDA---------LLLEES-NENVYVNI--RHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWE 261 (728)
Q Consensus 197 v~~~~l~---t~~~~~---------lv~~~~-~~~~~~~~--~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~ 261 (728)
|.+.++. +++... +.+... .......+ .+++|+++|+..+.+ ..|++.|+.++. ....+..
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~-~~~~~~~ 210 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL---SRVIIFDIRTLE-RLQIIEN 210 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT---SEEEEEETTTCC-EEEEEEC
T ss_pred EEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCe-eeEEEcc
Confidence 5555553 221100 011110 11222222 367889888766653 468999998732 2233332
Q ss_pred --cCCce-EEEEeecCCEEEEEEc
Q 004839 262 --CEGLA-HCIVEHHEGFLYLFTD 282 (728)
Q Consensus 262 --~~~~~-~~~~~~dg~~l~~~tn 282 (728)
....+ ...+++++..|+..+.
T Consensus 211 ~~h~~~v~~~~~s~~~~~l~s~~~ 234 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCVLILGTT 234 (437)
T ss_dssp CGGGCCEEEEEECTTSCEEEEEET
T ss_pred CCCCCceEEEEECCCCCEEEEEcC
Confidence 12222 2345667666655443
No 449
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.63 E-value=0.63 Score=46.18 Aligned_cols=157 Identities=8% Similarity=0.023 Sum_probs=89.1
Q ss_pred eeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCC-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeC
Q 004839 171 VSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINA 249 (728)
Q Consensus 171 ~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl 249 (728)
..++.|++|+ .||.+... .....|..+|+.+++ ...+.. ....|..++ +.+|+.|++.... .+.++++|.
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~--~~~s~v~~iD~~tg~v~~~i~l--~~~~fgeGi--~~~g~~lyv~t~~--~~~v~viD~ 93 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGL--YGRSSVRQVALQTGKVENIHKM--DDSYFGEGL--TLLNEKLYQVVWL--KNIGFIYDR 93 (266)
T ss_dssp EEEEEECSTT-EEEEEECS--TTTCEEEEEETTTCCEEEEEEC--CTTCCEEEE--EEETTEEEEEETT--CSEEEEEET
T ss_pred cccEEEeCCC-eEEEECCC--CCCCEEEEEECCCCCEEEEEec--CCCcceEEE--EEeCCEEEEEEec--CCEEEEEEC
Confidence 3678999995 56655322 234589999999886 222221 222233344 4567788877653 457999999
Q ss_pred CCCCCCeEEeeecCCceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecC---CCceEEEEEe
Q 004839 250 ADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDD---QGLVVEDVDF 326 (728)
Q Consensus 250 ~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~---~~~~i~~~~~ 326 (728)
++.+ ....+.-. ......+++||+++|+ +|. . ..|..+|.+ .. .....+.... +-..+..+.+
T Consensus 94 ~t~~-v~~~i~~g-~~~g~glt~Dg~~l~v-s~g-s-------~~l~viD~~-t~--~v~~~I~Vg~~~~p~~~~nele~ 159 (266)
T 2iwa_A 94 RTLS-NIKNFTHQ-MKDGWGLATDGKILYG-SDG-T-------SILYEIDPH-TF--KLIKKHNVKYNGHRVIRLNELEY 159 (266)
T ss_dssp TTTE-EEEEEECC-SSSCCEEEECSSSEEE-ECS-S-------SEEEEECTT-TC--CEEEEEECEETTEECCCEEEEEE
T ss_pred CCCc-EEEEEECC-CCCeEEEEECCCEEEE-ECC-C-------CeEEEEECC-CC--cEEEEEEECCCCcccccceeEEE
Confidence 8732 22333222 1223457788888885 563 2 358888765 21 1122221111 1123556666
Q ss_pred eCCEEEEEEecCCeeEEEEEecCCCC
Q 004839 327 CKTHMALILREGRTYRLCSVSLPLPA 352 (728)
Q Consensus 327 ~~~~lv~~~~~~g~~~l~~~~l~~~~ 352 (728)
.++.||+..- ....|.++|..+++
T Consensus 160 ~dg~lyvn~~--~~~~V~vID~~tg~ 183 (266)
T 2iwa_A 160 INGEVWANIW--QTDCIARISAKDGT 183 (266)
T ss_dssp ETTEEEEEET--TSSEEEEEETTTCC
T ss_pred ECCEEEEecC--CCCeEEEEECCCCc
Confidence 6777665432 23579999987754
No 450
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.2 Score=59.51 Aligned_cols=110 Identities=8% Similarity=0.082 Sum_probs=75.4
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
.+..++|||||++||... .+| .|+|+|..+++...... ...+..++|+| |+.|+-. .. ...|.+.|+.
T Consensus 19 ~V~~lafspdg~~lAsgs-~Dg----~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~-s~----D~~v~lWd~~ 87 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIAT-VTG----EVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVI-NA----KDTVYVLSLY 87 (902)
T ss_dssp CEEEEEEETTTTEEEEEE-TTS----EEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEE-ET----TCEEEEEETT
T ss_pred CcEEEEECCCCCEEEEEe-CCC----EEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEE-EC----cCeEEEEECC
Confidence 467788999999999875 444 49999998876544322 34678899999 8855444 32 2368888988
Q ss_pred CCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 204 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
+++.- ..+... .....+.++|||++|+..+.+. .|.++|+.+
T Consensus 88 ~~~~~-~~~~~~--~~V~~v~~sp~g~~l~sgs~dg---~V~lwd~~~ 129 (902)
T 2oaj_A 88 SQKVL-TTVFVP--GKITSIDTDASLDWMLIGLQNG---SMIVYDIDR 129 (902)
T ss_dssp TCSEE-EEEECS--SCEEEEECCTTCSEEEEEETTS---CEEEEETTT
T ss_pred CCcEE-EEEcCC--CCEEEEEECCCCCEEEEEcCCC---cEEEEECCC
Confidence 76421 122211 2345688999999998766543 578888876
No 451
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.59 E-value=0.24 Score=52.05 Aligned_cols=114 Identities=10% Similarity=0.020 Sum_probs=69.0
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccC-------ccceeeeEEEec-CCCEEEEEEecCCCCcce
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP-------QAVRVSNIAWAK-DGQALIYVVTDQNKRPYQ 196 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~-------~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~ 196 (728)
.+....|+|++....++...++. |.++|+.+|+.+... ....+..+.|++ |++.|+-. .. ...
T Consensus 159 ~v~~~~~~~~~~~~l~s~s~D~~----i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg-s~----D~~ 229 (380)
T 3iz6_a 159 YASSCQYVPDQETRLITGSGDQT----CVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISG-SC----DTT 229 (380)
T ss_dssp CCCCCBCCSSSSSCEEEECTTSC----EEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEE-ET----TSC
T ss_pred ceEEEEEecCCCCEEEEECCCCc----EEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEE-EC----CCe
Confidence 35567889986544444444553 999999999865422 123466788877 66655444 32 235
Q ss_pred eEEEECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 197 IYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 197 v~~~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
|...|+.........+..... ....+.|+|||++|+..+.+ ..|.+.|+.+
T Consensus 230 v~~wd~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~l~s~s~D---~~i~lwd~~~ 280 (380)
T 3iz6_a 230 VRLWDLRITSRAVRTYHGHEG-DINSVKFFPDGQRFGTGSDD---GTCRLFDMRT 280 (380)
T ss_dssp EEEEETTTTCCCCEEECCCSS-CCCEEEECTTSSEEEEECSS---SCEEEEETTT
T ss_pred EEEEECCCCCcceEEECCcCC-CeEEEEEecCCCeEEEEcCC---CeEEEEECCC
Confidence 777788643322223332222 23467899999987655443 3477888876
No 452
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.58 E-value=0.064 Score=56.52 Aligned_cols=141 Identities=4% Similarity=-0.059 Sum_probs=81.6
Q ss_pred EeeceeeCC-CCCEEEEEEEcCCCcEEEEEEEECCCC-ceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEE
Q 004839 125 YEELSEVSP-DHKFLAYTMYDKDNDYFTLSVRNLNSG-ALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 200 (728)
Q Consensus 125 ~~~~~~~SP-DG~~lA~~~~~~g~e~~~l~v~dl~tg-~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~ 200 (728)
.+..+.|+| |++.|+-. ..+|. |+++|+... +...... ...+..++|+|||+.|+-... ...|.+.
T Consensus 207 ~v~~~~~~~~~~~~l~sg-s~D~~----v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-----D~~i~lw 276 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISG-SCDTT----VRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSD-----DGTCRLF 276 (380)
T ss_dssp CEEEEEECSSSCCEEEEE-ETTSC----EEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECS-----SSCEEEE
T ss_pred CeEEEEeecCCCCEEEEE-ECCCe----EEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcC-----CCeEEEE
Confidence 345566766 78877665 45554 999999743 3332211 346788999999997765432 2357788
Q ss_pred ECCCCCceeEEeee-cC-----cceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEee---ecC-Cc-eEEE
Q 004839 201 IIGSTDEDALLLEE-SN-----ENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIW---ECE-GL-AHCI 269 (728)
Q Consensus 201 ~l~t~~~~~lv~~~-~~-----~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~---~~~-~~-~~~~ 269 (728)
|+.++..- .++.. .. ......+.|||||++|+....+ ..|++.|+..+. ....+. ... .. ....
T Consensus 277 d~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d---g~i~vwd~~~~~-~~~~~~~~~~~h~~~v~~l~ 351 (380)
T 3iz6_a 277 DMRTGHQL-QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN---GDCYVWDTLLAE-MVLNLGTLQNSHEGRISCLG 351 (380)
T ss_dssp ETTTTEEE-EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT---SCEEEEETTTCC-EEEEECCSCSSCCCCCCEEE
T ss_pred ECCCCcEE-EEecccccccccccCceEEEEECCCCCEEEEEECC---CCEEEEECCCCc-eEEEEecccCCCCCceEEEE
Confidence 88776421 22211 11 1123467899999998765443 468888987632 122221 111 11 2235
Q ss_pred EeecCCEEEEE
Q 004839 270 VEHHEGFLYLF 280 (728)
Q Consensus 270 ~~~dg~~l~~~ 280 (728)
++++|..|+-.
T Consensus 352 ~s~dg~~l~sg 362 (380)
T 3iz6_a 352 LSSDGSALCTG 362 (380)
T ss_dssp ECSSSSEEEEE
T ss_pred ECCCCCEEEEe
Confidence 56777765543
No 453
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.58 E-value=0.15 Score=50.20 Aligned_cols=191 Identities=10% Similarity=0.008 Sum_probs=98.0
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
...+.++|||+ |.++.+..+ ..|+++|..++....... ......+++++||+ ||++.. ...|++++..
T Consensus 26 p~~i~~~~~g~-l~v~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-----~~~i~~~d~~ 95 (270)
T 1rwi_B 26 PSGVAVDSAGN-VYVTSEGMY---GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-----NNRVVTLAAG 95 (270)
T ss_dssp EEEEEECTTCC-EEEEECSSS---CEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET-----TTEEEEECTT
T ss_pred ccceEECCCCC-EEEEccCCC---CcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC-----CCEEEEEeCC
Confidence 44667899998 433144332 248888887765433222 23456789999998 666532 3478888876
Q ss_pred CCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC--CceEEEEeecCCEEEEEE
Q 004839 204 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE--GLAHCIVEHHEGFLYLFT 281 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~--~~~~~~~~~dg~~l~~~t 281 (728)
+.... .+.........++.+++||+ |++.... ...|++++..+ .......... ......++++|. +|+..
T Consensus 96 ~~~~~--~~~~~~~~~p~~i~~~~~g~-l~v~~~~--~~~i~~~~~~~--~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~ 167 (270)
T 1rwi_B 96 SNNQT--VLPFDGLNYPEGLAVDTQGA-VYVADRG--NNRVVKLAAGS--KTQTVLPFTGLNDPDGVAVDNSGN-VYVTD 167 (270)
T ss_dssp CSCCE--ECCCCSCSSEEEEEECTTCC-EEEEEGG--GTEEEEECTTC--CSCEECCCCSCCSCCCEEECTTCC-EEEEE
T ss_pred CceEe--eeecCCcCCCcceEECCCCC-EEEEECC--CCEEEEEECCC--ceeEeeccccCCCceeEEEeCCCC-EEEEE
Confidence 54322 12111112235678899998 5554432 34688887654 2222221111 111224455554 66654
Q ss_pred cCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCC-EEEEEEecCCeeEEEEEecC
Q 004839 282 DAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKT-HMALILREGRTYRLCSVSLP 349 (728)
Q Consensus 282 n~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~-~lv~~~~~~g~~~l~~~~l~ 349 (728)
... ..|++++.+ . .. ...........+.++.+..+ .|++....++ .|.+++..
T Consensus 168 ~~~--------~~i~~~~~~-~---~~-~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~--~v~~~~~~ 221 (270)
T 1rwi_B 168 TDN--------NRVVKLEAE-S---NN-QVVLPFTDITAPWGIAVDEAGTVYVTEHNTN--QVVKLLAG 221 (270)
T ss_dssp GGG--------TEEEEECTT-T---CC-EEECCCSSCCSEEEEEECTTCCEEEEETTTS--CEEEECTT
T ss_pred CCC--------CEEEEEecC-C---Cc-eEeecccCCCCceEEEECCCCCEEEEECCCC--cEEEEcCC
Confidence 322 357777765 1 11 11111111134667777654 6666654433 47777754
No 454
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.57 E-value=0.093 Score=54.09 Aligned_cols=142 Identities=10% Similarity=-0.062 Sum_probs=84.1
Q ss_pred EeeceeeCCC---CCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-------cceeeeEEEecC----CCEEEEEEecC
Q 004839 125 YEELSEVSPD---HKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-------AVRVSNIAWAKD----GQALIYVVTDQ 190 (728)
Q Consensus 125 ~~~~~~~SPD---G~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-------~~~~~~~~WspD----g~~l~y~~~~~ 190 (728)
.+..++|||+ |..+.++....| .|.++|+.+++.+.... ...+..++|+|| |+.|+.. ..
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~~~----~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~-~~- 93 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVGSN----RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA-GS- 93 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEETT----EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE-ET-
T ss_pred ceEEEEEecccCCCCceEEEECCCC----EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe-cC-
Confidence 5777889985 665555544444 48999999876543211 245788999999 4445444 32
Q ss_pred CCCcceeEEEECCCCCceeEEeeecCcceEEEEEEcC-CCCEEEEEEcCCCceEEEEEeCCCCCCCeEEee----ecCCc
Q 004839 191 NKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTK-DFHFVCVHTFSTTSSKVFLINAADPFSGLTLIW----ECEGL 265 (728)
Q Consensus 191 ~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~----~~~~~ 265 (728)
...|..+++.+++.. ..+... ......+.|+| ++++|+..+.+ ..|++.|+.+ ++..... .....
T Consensus 94 ---dg~i~v~d~~~~~~~-~~~~~~-~~~i~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~--~~~~~~~~~~~~~~~~ 163 (366)
T 3k26_A 94 ---RGIIRIINPITMQCI-KHYVGH-GNAINELKFHPRDPNLLLSVSKD---HALRLWNIQT--DTLVAIFGGVEGHRDE 163 (366)
T ss_dssp ---TCEEEEECTTTCCEE-EEEESC-CSCEEEEEECSSCTTEEEEEETT---SCEEEEETTT--TEEEEEECSTTSCSSC
T ss_pred ---CCEEEEEEchhceEe-eeecCC-CCcEEEEEECCCCCCEEEEEeCC---CeEEEEEeec--CeEEEEecccccccCc
Confidence 237888898876422 222222 22345688999 88887766553 3588889876 3333332 12222
Q ss_pred e-EEEEeecCCEEEEEEc
Q 004839 266 A-HCIVEHHEGFLYLFTD 282 (728)
Q Consensus 266 ~-~~~~~~dg~~l~~~tn 282 (728)
+ ...+++++..|+..+.
T Consensus 164 v~~~~~~~~~~~l~~~~~ 181 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCGM 181 (366)
T ss_dssp EEEEEECTTSSEEEEEET
T ss_pred eeEEEECCCCCEEEEecC
Confidence 2 2344577776665443
No 455
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.53 E-value=0.48 Score=46.26 Aligned_cols=190 Identities=12% Similarity=0.005 Sum_probs=103.5
Q ss_pred eceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCC
Q 004839 127 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGST 205 (728)
Q Consensus 127 ~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~ 205 (728)
.++.+++ ..|..+. +..+...|.++|+++|+.+.... ........-+.+++.||-.. ++...++.+|..+.
T Consensus 24 qGL~~~~--~~Lyest--G~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~lt----w~~~~v~v~D~~tl 95 (243)
T 3mbr_X 24 EGLFYLR--GHLYEST--GETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLT----WRNHEGFVYDLATL 95 (243)
T ss_dssp EEEEEET--TEEEEEE--CCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE----SSSSEEEEEETTTT
T ss_pred ccEEEEC--CEEEEEC--CCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEE----eeCCEEEEEECCcC
Confidence 3445665 4454442 22234679999999999776433 23333333455677787653 45668999999887
Q ss_pred C-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE----EEEeecCCEEEEE
Q 004839 206 D-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH----CIVEHHEGFLYLF 280 (728)
Q Consensus 206 ~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~----~~~~~dg~~l~~~ 280 (728)
+ ..++.+. ... ..+++||+.|+++. .+++|+++|.++.. ....+.-...+.. -.++..++++|.-
T Consensus 96 ~~~~ti~~~--~~G----wglt~dg~~L~vSd---gs~~l~~iDp~t~~-~~~~I~V~~~g~~~~~lNeLe~~~G~lyan 165 (243)
T 3mbr_X 96 TPRARFRYP--GEG----WALTSDDSHLYMSD---GTAVIRKLDPDTLQ-QVGSIKVTAGGRPLDNLNELEWVNGELLAN 165 (243)
T ss_dssp EEEEEEECS--SCC----CEEEECSSCEEEEC---SSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cEEEEEeCC--CCc----eEEeeCCCEEEEEC---CCCeEEEEeCCCCe-EEEEEEEccCCcccccceeeEEeCCEEEEE
Confidence 5 3333332 122 24567898877653 25689999998732 2233322111111 1233346677754
Q ss_pred EcCCccCCCCCceEEEEeeCCCCCCCCCCeEEee------------cCCCceEEEEEeeC--CEEEEEEecCCeeEEEEE
Q 004839 281 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFI------------DDQGLVVEDVDFCK--THMALILREGRTYRLCSV 346 (728)
Q Consensus 281 tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~------------~~~~~~i~~~~~~~--~~lv~~~~~~g~~~l~~~ 346 (728)
.... -.|.++|.+ + ++....+. ...+..+.+++... +.|+++-.. -+.++.+
T Consensus 166 vw~s--------~~I~vIDp~-t---G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~--wp~~~~v 231 (243)
T 3mbr_X 166 VWLT--------SRIARIDPA-S---GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR--WPMLYEI 231 (243)
T ss_dssp ETTT--------TEEEEECTT-T---CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT--CSEEEEE
T ss_pred ECCC--------CeEEEEECC-C---CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC--CCcEEEE
Confidence 4332 247777765 2 22211111 11234678888874 566665432 3566655
Q ss_pred ec
Q 004839 347 SL 348 (728)
Q Consensus 347 ~l 348 (728)
.+
T Consensus 232 ~~ 233 (243)
T 3mbr_X 232 RL 233 (243)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 456
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.49 E-value=0.26 Score=48.45 Aligned_cols=190 Identities=12% Similarity=0.021 Sum_probs=100.5
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 203 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~ 203 (728)
...+.++|||+ | |..+..+ .|+++|.+++....... ......+++++||+ ||++... ...|++++.+
T Consensus 69 p~~i~~~~~g~-l-~v~~~~~----~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----~~~i~~~~~~ 137 (270)
T 1rwi_B 69 PQGLAVDGAGT-V-YVTDFNN----RVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA-VYVADRG----NNRVVKLAAG 137 (270)
T ss_dssp CCCEEECTTCC-E-EEEETTT----EEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-EEEEEGG----GTEEEEECTT
T ss_pred cceeEECCCCC-E-EEEcCCC----EEEEEeCCCceEeeeecCCcCCCcceEECCCCC-EEEEECC----CCEEEEEECC
Confidence 44567899998 4 3334422 48899988776443322 23456789999997 6665322 3468888765
Q ss_pred CCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-Cc-eEEEEeecCCEEEEEE
Q 004839 204 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-GL-AHCIVEHHEGFLYLFT 281 (728)
Q Consensus 204 t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~~-~~~~~~~dg~~l~~~t 281 (728)
+.... ...........++.+++||+ |++.... ...|+++|.++. ......... .. ....++++| .+|+..
T Consensus 138 ~~~~~--~~~~~~~~~p~~i~~~~~g~-l~v~~~~--~~~i~~~~~~~~--~~~~~~~~~~~~p~~i~~d~~g-~l~v~~ 209 (270)
T 1rwi_B 138 SKTQT--VLPFTGLNDPDGVAVDNSGN-VYVTDTD--NNRVVKLEAESN--NQVVLPFTDITAPWGIAVDEAG-TVYVTE 209 (270)
T ss_dssp CCSCE--ECCCCSCCSCCCEEECTTCC-EEEEEGG--GTEEEEECTTTC--CEEECCCSSCCSEEEEEECTTC-CEEEEE
T ss_pred CceeE--eeccccCCCceeEEEeCCCC-EEEEECC--CCEEEEEecCCC--ceEeecccCCCCceEEEECCCC-CEEEEE
Confidence 54321 11111111123467899998 5555432 347899998762 222221111 11 122344554 666655
Q ss_pred cCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecC
Q 004839 282 DAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLP 349 (728)
Q Consensus 282 n~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~ 349 (728)
..+ ..|.+++.+ . .....+.......+.++.+.. +.|++....++ +|.++++.
T Consensus 210 ~~~--------~~v~~~~~~-~----~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~--~v~~~~~~ 263 (270)
T 1rwi_B 210 HNT--------NQVVKLLAG-S----TTSTVLPFTGLNTPLAVAVDSDRTVYVADRGND--RVVKLTSL 263 (270)
T ss_dssp TTT--------SCEEEECTT-C----SCCEECCCCSCSCEEEEEECTTCCEEEEEGGGT--EEEEECCC
T ss_pred CCC--------CcEEEEcCC-C----CcceeeccCCCCCceeEEECCCCCEEEEECCCC--EEEEEcCC
Confidence 432 237777654 1 111122211113466676664 45666655444 56666543
No 457
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.46 E-value=0.28 Score=52.31 Aligned_cols=113 Identities=9% Similarity=0.027 Sum_probs=70.7
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECC---CCceeccCc--------------cceeeeE--EEecCCCEEEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLN---SGALCSKPQ--------------AVRVSNI--AWAKDGQALIY 185 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~---tg~~~~~~~--------------~~~~~~~--~WspDg~~l~y 185 (728)
.+..+.|+||+++|+... .+| .|.++|++ +|+...... ......+ .|++|++.|+.
T Consensus 113 ~v~~~~~~~~~~~l~s~s-~dg----~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSS-KDG----QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA 187 (437)
T ss_dssp CEEEEEECTTSSEEEEEE-TTS----EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE
T ss_pred CEEEEEEeCCCCEEEEEe-CCC----EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE
Confidence 467889999999998764 455 38889884 554332211 0112222 36678876666
Q ss_pred EEecCCCCcceeEEEECCCCCceeEEeeec-CcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 186 VVTDQNKRPYQIYCSIIGSTDEDALLLEES-NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 186 ~~~~~~~~~~~v~~~~l~t~~~~~lv~~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
... ...|...|+.+++.. ..+... .......+.++||+++|+..+.+. .|.+.|+.+
T Consensus 188 ~~~-----d~~i~iwd~~~~~~~-~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg---~i~iwd~~~ 245 (437)
T 3gre_A 188 LTN-----LSRVIIFDIRTLERL-QIIENSPRHGAVSSICIDEECCVLILGTTRG---IIDIWDIRF 245 (437)
T ss_dssp EET-----TSEEEEEETTTCCEE-EEEECCGGGCCEEEEEECTTSCEEEEEETTS---CEEEEETTT
T ss_pred EeC-----CCeEEEEeCCCCeee-EEEccCCCCCceEEEEECCCCCEEEEEcCCC---eEEEEEcCC
Confidence 533 237888999876522 222221 223456788999999987766543 588888876
No 458
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.44 E-value=0.24 Score=55.91 Aligned_cols=198 Identities=11% Similarity=0.063 Sum_probs=112.9
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceec--cCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS--KPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~--~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
...+.++++++.|.++ |..++ .|+..++++..... ... .....+++..+.++.||++.. ...+|.+.++
T Consensus 42 ~~~ld~~~~~~~ly~s-D~~~~---~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~----~~~~I~v~~~ 113 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWS-DVSEE---AIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS----ETNRIEVSNL 113 (619)
T ss_dssp EEEEEEETTTTEEEEE-ETTTT---EEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEET----TTTEEEEEET
T ss_pred eEEEEEEeCCCEEEEE-ECCCC---eEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeC----CCCEEEEEEC
Confidence 3456789988888666 65543 47888887763211 111 235567888888888988742 2357999998
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC--ceEEEEeecCCEEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG--LAHCIVEHHEGFLYLF 280 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~--~~~~~~~~dg~~l~~~ 280 (728)
.......++...-... .++.+.|.+.+|+|+.... ...|++.++++ ...+.+....- .....+++++++||+.
T Consensus 114 dG~~~~~l~~~~l~~P--~~Iavdp~~g~ly~tD~g~-~~~I~r~~~dG--~~~~~l~~~~~~~P~Glald~~~~~LY~a 188 (619)
T 3s94_A 114 DGSLRKVLFWQELDQP--RAIALDPSSGFMYWTDWGE-VPKIERAGMDG--SSRFIIINSEIYWPNGLTLDYEEQKLYWA 188 (619)
T ss_dssp TSCSCEEEECSSCSCC--CCEEEETTTTEEEEEECSS-SCEEEEEETTS--CSCEEEECSSCSSEEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEeCCCCCC--ceEEEecCCCeEEEeccCC-CCEEEEEECCC--CceEEEEeCCCCCCcEEEEEccCCEEEEE
Confidence 7654334432222222 2467889888898887532 36899999976 33344432221 1233567778899887
Q ss_pred EcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCCC
Q 004839 281 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 281 tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
-.. +..|.+++.+ . ..-+.++.. ......+++++++.||+.... ...|.+++..++
T Consensus 189 D~~--------~~~I~~~~~d-G---~~~~~~~~~-~~~~P~gi~~~~~~ly~td~~--~~~V~~~d~~tg 244 (619)
T 3s94_A 189 DAK--------LNFIHKSNLD-G---TNRQAVVKG-SLPHPFALTLFEDILYWTDWS--THSILACNKYTG 244 (619)
T ss_dssp ETT--------TCCEEEESSS-C---CEEC----------CCCEEESSSEEEEECTT--TCSEEEEESSSC
T ss_pred eCC--------CCeEEEecCC-C---CccEEEEeC-CCCCceEEEEeCCEEEEecCC--CCEEEEEECCCC
Confidence 432 2458888876 2 111222221 112234677788877776543 345777776554
No 459
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.42 E-value=0.64 Score=48.16 Aligned_cols=147 Identities=10% Similarity=0.061 Sum_probs=77.3
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEe--------cC------
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVT--------DQ------ 190 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~--------~~------ 190 (728)
+....++++++.++.+...++ .|.++|+.+|+.+.... ...+..+.|+++. ++.... ..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~d~----~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~ 134 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGVKE----VVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVSYGDVISVFKFGNPWKRIT 134 (355)
T ss_dssp CCEEEECTTSSEEEEECSSTT----EEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEEETTEEEEEESSTTCCBSS
T ss_pred eEEEEEcCCCCEEEEEECCcc----EEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeE
Confidence 445668899998887643222 68999999987654322 3345566666653 211110 00
Q ss_pred --------------------CCCcceeEEEECCCCCc--------------e-eEEeeecCcceEEEEEEcCCCCEEEEE
Q 004839 191 --------------------NKRPYQIYCSIIGSTDE--------------D-ALLLEESNENVYVNIRHTKDFHFVCVH 235 (728)
Q Consensus 191 --------------------~~~~~~v~~~~l~t~~~--------------~-~lv~~~~~~~~~~~~~~SpDg~~l~~~ 235 (728)
......|...|+.++.. . ...+.... .....+.|||||++|+..
T Consensus 135 ~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~-~~v~~~~~s~~g~~l~s~ 213 (355)
T 3vu4_A 135 DDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT-NPIKMVRLNRKSDMVATC 213 (355)
T ss_dssp CCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCS-SCEEEEEECTTSSEEEEE
T ss_pred EeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccC-CceEEEEECCCCCEEEEE
Confidence 01123455556554320 0 11222222 224568999999988765
Q ss_pred EcCCCceEEEEEeCCCCCCCeEEeee--cCCce-EEEEeecCCEEEEEEc
Q 004839 236 TFSTTSSKVFLINAADPFSGLTLIWE--CEGLA-HCIVEHHEGFLYLFTD 282 (728)
Q Consensus 236 ~~~~~~~~l~~~dl~~~~~~~~~l~~--~~~~~-~~~~~~dg~~l~~~tn 282 (728)
+.+. +-|.+.|+.++. ....+.. ....+ ...++++|..|+..+.
T Consensus 214 s~d~--~~v~iwd~~~~~-~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 214 SQDG--TIIRVFKTEDGV-LVREFRRGLDRADVVDMKWSTDGSKLAVVSD 260 (355)
T ss_dssp ETTC--SEEEEEETTTCC-EEEEEECTTCCSCEEEEEECTTSCEEEEEET
T ss_pred eCCC--CEEEEEECCCCc-EEEEEEcCCCCCcEEEEEECCCCCEEEEEEC
Confidence 5432 127888988732 2333331 22222 2355677777665544
No 460
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.40 E-value=0.63 Score=47.12 Aligned_cols=199 Identities=15% Similarity=0.140 Sum_probs=101.9
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGST 205 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~ 205 (728)
...+.|+|||+ | |..+..+. .|+.+|.+++.............+++++||+ ||.+.... ...+|++++..++
T Consensus 34 pegia~~~~g~-l-yv~d~~~~---~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~-l~vad~~~--~~~~v~~~d~~~g 105 (306)
T 2p4o_A 34 LENLASAPDGT-I-FVTNHEVG---EIVSITPDGNQQIHATVEGKVSGLAFTSNGD-LVATGWNA--DSIPVVSLVKSDG 105 (306)
T ss_dssp EEEEEECTTSC-E-EEEETTTT---EEEEECTTCCEEEEEECSSEEEEEEECTTSC-EEEEEECT--TSCEEEEEECTTS
T ss_pred cceEEECCCCC-E-EEEeCCCC---eEEEECCCCceEEEEeCCCCceeEEEcCCCc-EEEEeccC--CcceEEEEcCCCC
Confidence 44678999998 4 44464443 3889998875432222234567889999998 65553221 1236888887666
Q ss_pred CceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeee-----c-CC--ceEEEEeecCCEE
Q 004839 206 DEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWE-----C-EG--LAHCIVEHHEGFL 277 (728)
Q Consensus 206 ~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~-----~-~~--~~~~~~~~dg~~l 277 (728)
+.. .+.......+.-++...+++ .+++... ....||++|..++......... . .. .....++++++.|
T Consensus 106 ~~~-~~~~~~~~~~~~g~~~~~~~-~~~v~d~--~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~l 181 (306)
T 2p4o_A 106 TVE-TLLTLPDAIFLNGITPLSDT-QYLTADS--YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFL 181 (306)
T ss_dssp CEE-EEEECTTCSCEEEEEESSSS-EEEEEET--TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEE
T ss_pred eEE-EEEeCCCccccCcccccCCC-cEEEEEC--CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEE
Confidence 422 22222333343444545544 4444432 2347999998652111111111 0 01 1112247888888
Q ss_pred EEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEecC
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLP 349 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l~ 349 (728)
|+..... .+|++++.+........+.+... ....++.+.. +.|++....+ .+|.+++.+
T Consensus 182 yv~d~~~--------~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~--~~V~~~~~~ 241 (306)
T 2p4o_A 182 YVSNTEK--------MLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIY--NSVVRIAPD 241 (306)
T ss_dssp EEEETTT--------TEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTT--CCEEEECTT
T ss_pred EEEeCCC--------CEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEEEeCCC--CeEEEECCC
Confidence 8754322 35788776511111122222111 1234455553 4565554433 357777753
No 461
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.35 E-value=0.22 Score=50.89 Aligned_cols=157 Identities=14% Similarity=-0.019 Sum_probs=86.8
Q ss_pred eeceeeCC-CCCEEEEEEEcCC--------------CcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEec
Q 004839 126 EELSEVSP-DHKFLAYTMYDKD--------------NDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTD 189 (728)
Q Consensus 126 ~~~~~~SP-DG~~lA~~~~~~g--------------~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~ 189 (728)
...+.+.| ||+ | |..+... .....|+.+|.++++...... ......++|+|||+.||++...
T Consensus 128 p~~i~~d~~~G~-l-~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~ 205 (322)
T 2fp8_A 128 LYAVTVDQRTGI-V-YFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFL 205 (322)
T ss_dssp EEEEEECTTTCC-E-EEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG
T ss_pred cceEEEecCCCE-E-EEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCC
Confidence 45678899 996 3 3334321 122469999998887543211 1234568999999988876432
Q ss_pred CCCCcceeEEEECCCCC-ceeEEeeecCcceEEEEEEcCCCCEEEEEEcC--------CCceEEEEEeCCCCCCCeEEee
Q 004839 190 QNKRPYQIYCSIIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFS--------TTSSKVFLINAADPFSGLTLIW 260 (728)
Q Consensus 190 ~~~~~~~v~~~~l~t~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~--------~~~~~l~~~dl~~~~~~~~~l~ 260 (728)
..+|+++++.+.. ....++..... -.++.++++|+ |++.... .....|+++|.++ .....+.
T Consensus 206 ----~~~I~~~~~~~~~~~~~~~~~~~~g--P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G--~~~~~~~ 276 (322)
T 2fp8_A 206 ----SHQIVKYWLEGPKKGTAEVLVKIPN--PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFG--NILEVIP 276 (322)
T ss_dssp ----GTEEEEEESSSTTTTCEEEEEECSS--EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTS--CEEEEEE
T ss_pred ----CCeEEEEECCCCcCCccceEEeCCC--CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCC--CEEEEEE
Confidence 3579999987542 11122222111 34578899997 5555443 1245788888753 2233333
Q ss_pred ecCC---ceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCC
Q 004839 261 ECEG---LAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVD 301 (728)
Q Consensus 261 ~~~~---~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~ 301 (728)
.... .....+..+++.||+.+... ..|.+++++
T Consensus 277 ~~~g~~~~~~~~~~~~~g~L~v~~~~~--------~~i~~~~~~ 312 (322)
T 2fp8_A 277 LPPPFAGEHFEQIQEHDGLLYIGTLFH--------GSVGILVYD 312 (322)
T ss_dssp CCTTTTTSCCCEEEEETTEEEEECSSC--------SEEEEEEC-
T ss_pred CCCCCccccceEEEEeCCEEEEeecCC--------CceEEEecc
Confidence 2211 11111223467888764432 347777654
No 462
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.29 E-value=0.099 Score=54.05 Aligned_cols=126 Identities=13% Similarity=0.040 Sum_probs=61.0
Q ss_pred EEEEEEEECCCCceeccCcc-----ceeeeEEEecCCCEEEEEEecC-------CCCcceeEEEECCCCCc-eeEEeeec
Q 004839 149 YFTLSVRNLNSGALCSKPQA-----VRVSNIAWAKDGQALIYVVTDQ-------NKRPYQIYCSIIGSTDE-DALLLEES 215 (728)
Q Consensus 149 ~~~l~v~dl~tg~~~~~~~~-----~~~~~~~WspDg~~l~y~~~~~-------~~~~~~v~~~~l~t~~~-~~lv~~~~ 215 (728)
..+|+|+|+++|+.+..... ..+...+|+|||+.++....+. ......|...++.++.. ..+.+..+
T Consensus 202 D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p 281 (356)
T 2w18_A 202 MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLP 281 (356)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCC
T ss_pred CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeecc
Confidence 34699999999986553221 1234568999998776543211 12233455566665531 11111101
Q ss_pred Cc--ceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCc-eE-EEEeecCCEEEEE
Q 004839 216 NE--NVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL-AH-CIVEHHEGFLYLF 280 (728)
Q Consensus 216 ~~--~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~-~~-~~~~~dg~~l~~~ 280 (728)
+. ..++...+ +|..++-.+.+ ..|.+.|+.+++ ....+....+. .. ..++|||+.|+--
T Consensus 282 ~Gh~~~~lsg~~--sg~~lASgS~D---gTIkIWDl~tGk-~l~tL~gH~~~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 282 PGQAGRFLEGDV--KDHCAAAILTS---GTIAIWDLLLGQ-CTALLPPVSDQHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp TTCCCCEEEEEE--ETTEEEEEETT---SCEEEEETTTCS-EEEEECCC--CCCCEEEECSSSSEEEEE
T ss_pred CCCcceeEcccc--CCCEEEEEcCC---CcEEEEECCCCc-EEEEecCCCCCeEEEEEECCCCCEEEEE
Confidence 11 11222222 24444332222 358888998832 22333323222 22 3577888876644
No 463
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.16 E-value=0.13 Score=52.63 Aligned_cols=113 Identities=11% Similarity=0.045 Sum_probs=67.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceecc---Cc-cceeeeEEEecC--CCEEEEEEecCCCCcceeE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK---PQ-AVRVSNIAWAKD--GQALIYVVTDQNKRPYQIY 198 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~---~~-~~~~~~~~WspD--g~~l~y~~~~~~~~~~~v~ 198 (728)
.+..++|||||++||-.. .++ .|+|+|+.+++.... .. ...+..++|+++ ++.|+-...| ..|.
T Consensus 15 ~V~~v~~s~~g~~lasgs-~D~----~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-----~~v~ 84 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCS-SDR----SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-----RKVI 84 (316)
T ss_dssp CEEEEEECGGGCEEEEEE-TTT----EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-----SCEE
T ss_pred eEEEeeEcCCCCEEEEEe-CCC----eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-----CEEE
Confidence 467788999999998764 444 489999988753221 11 346778999864 7766544322 2577
Q ss_pred EEECCCCC-ceeEEeeecCcceEEEEEEcCC--CCEEEEEEcCCCceEEEEEeCCC
Q 004839 199 CSIIGSTD-EDALLLEESNENVYVNIRHTKD--FHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 199 ~~~l~t~~-~~~lv~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
+.|+.++. .....+.... .....+.|+|| |++|+..+.+ . .|.+.|+.+
T Consensus 85 iWd~~~~~~~~~~~~~~h~-~~V~~v~~~p~~~g~~lasgs~D-~--~i~lwd~~~ 136 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHD-SSVNSVCWAPHDYGLILACGSSD-G--AISLLTYTG 136 (316)
T ss_dssp EECCSSSCCCEEEEECCCS-SCCCEEEECCTTTCSCEEEECSS-S--CEEEEEECS
T ss_pred EEECCCCcceEEEEccCCC-CceEEEEECCCCCCcEEEEEcCC-C--CEEEEecCC
Confidence 77776653 2222222222 22346789998 6666544332 2 355666654
No 464
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=96.15 E-value=0.017 Score=59.39 Aligned_cols=94 Identities=16% Similarity=0.041 Sum_probs=60.3
Q ss_pred CccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEEEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHHHHHcCCCCC
Q 004839 495 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 574 (728)
Q Consensus 495 ~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 574 (728)
..|.|+++||+.+.. ..|......| ++.|+.+++++.. ...+++++.+.+..++..- ...
T Consensus 45 ~~~~l~~~hg~~g~~--~~~~~~~~~l---~~~v~~~~~~~~~--------------~~~~~~~~a~~~~~~i~~~-~~~ 104 (316)
T 2px6_A 45 SERPLFLVHPIEGST--TVFHSLASRL---SIPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQV-QPE 104 (316)
T ss_dssp SSCCEEEECCTTCCS--GGGHHHHHHC---SSCEEEECCCTTS--------------CTTCHHHHHHHHHHHHTTT-CSS
T ss_pred CCCeEEEECCCCCCH--HHHHHHHHhc---CCCEEEEECCCCC--------------CcCCHHHHHHHHHHHHHHh-CCC
Confidence 346788999876543 4565555555 3899999998210 1235666666554444321 123
Q ss_pred CcEEEEEeCccHHHHHHHHHhC---CCc---eeEEEEeCC
Q 004839 575 HKLAGWGYSAGGLLVAAAINCC---PDL---FRAVVLEVP 608 (728)
Q Consensus 575 ~ri~i~G~S~GG~~~~~~~~~~---p~~---f~a~v~~~p 608 (728)
+++.++|||+||.++..++.+. ++. ++.+++..+
T Consensus 105 ~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~ 144 (316)
T 2px6_A 105 GPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDG 144 (316)
T ss_dssp CCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESC
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcC
Confidence 6799999999999999888754 344 677776554
No 465
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.05 E-value=0.023 Score=65.54 Aligned_cols=198 Identities=8% Similarity=-0.032 Sum_probs=110.4
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCC----CceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS----GALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 199 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~t----g~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~ 199 (728)
...+.|+++++.|.++ +..+. .|+++++++ .....+.. ......+++.+.++.||++. .....|++
T Consensus 408 p~gla~d~~~~~Ly~s-D~~~~---~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD----~~~~~I~v 479 (699)
T 1n7d_A 408 VVALDTEVASNRIYWS-DLSQR---MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD----SVLGTVSV 479 (699)
T ss_dssp CCCCEEETTTTEEEEC-CTTTT---SBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECC----TTTSCEEE
T ss_pred eEEEccccccCeEEEE-ecCCC---eEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEe----ccCCeEEE
Confidence 3466789988888665 55443 388899886 22222211 12345677776677787752 12347888
Q ss_pred EECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeec-C-CceEEEEeecCCEE
Q 004839 200 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWEC-E-GLAHCIVEHHEGFL 277 (728)
Q Consensus 200 ~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~-~-~~~~~~~~~dg~~l 277 (728)
+++.......++...... -.+++++|++.+|+++... ....|+++++++. ..+.+... . ......+++++++|
T Consensus 480 ~d~dg~~~~~l~~~~~~~--P~giavDp~~g~ly~td~~-~~~~I~~~~~dG~--~~~~l~~~~l~~PnGlavd~~~~~L 554 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQGSK--PRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGV--DIYSLVTENIQWPNGITLDLLSGRL 554 (699)
T ss_dssp EBSSSCCEEEECCCSSCC--CCCEECCSSSSCCEECCCS-SSCCEEBCCSSSC--CCCEESCSSCSSCCCEEECTTTCCE
T ss_pred EecCCCceEEEEeCCCCC--cceEEEccCCCcEEEcccC-CCCeEEEEeCCCC--CeeEEEeCCCCCccEEEEeccCCEE
Confidence 888654322332211111 1246789988888876532 2357888888752 22223211 1 11224567778888
Q ss_pred EEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecC-CCceEEEEEeeCCEEEEEEecCCeeEEEEEecCC
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDD-QGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~-~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
|+.... +.+|.+++.+ . ...+.++... ......++.++++.||++.... .+|.+++..+
T Consensus 555 Y~aD~~--------~~~I~~~d~d-G---~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~--~~V~~~d~~~ 614 (699)
T 1n7d_A 555 YWVDSK--------LHSISSIDVN-G---GNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN--EAIFSANRLT 614 (699)
T ss_dssp EEEETT--------TTEEEEECSS-S---SCCEEECCCSSSCSSCCCCEEETTEEEEECSTT--TCEEEEETTT
T ss_pred EEEecC--------CCeEEEEccC-C---CceEEEEecCCcCCCceEeEEECCEEEEEeCCC--CeEEEEEccC
Confidence 876432 2468888776 2 2333343221 1122345667788888776433 4677777543
No 466
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.03 E-value=0.35 Score=48.94 Aligned_cols=113 Identities=9% Similarity=0.034 Sum_probs=65.3
Q ss_pred EeeceeeCCC--CCEEEEEEEcCCCcEEEEEEEECCCCceeccC---------------ccceeeeEEEecC---CCEEE
Q 004839 125 YEELSEVSPD--HKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP---------------QAVRVSNIAWAKD---GQALI 184 (728)
Q Consensus 125 ~~~~~~~SPD--G~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~---------------~~~~~~~~~WspD---g~~l~ 184 (728)
.+..+.|+|+ |++|+... .+| .|+++|+.+++..... ....+..+.|+|+ ++.|+
T Consensus 112 ~v~~~~~~~~~~~~~l~~~~-~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~ 186 (351)
T 3f3f_A 112 SLYSVKFAPAHLGLKLACLG-NDG----ILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA 186 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEE-TTC----EEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE
T ss_pred ceeEEEEcCCCCCcEEEEec-CCC----cEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE
Confidence 4677889999 99988764 444 4999999988744321 1235578899998 77666
Q ss_pred EEEecCCCCcceeEEEECCCCCce-eEEeeecCcceEEEEEEcCCC----CEEEEEEcCCCceEEEEEeCCC
Q 004839 185 YVVTDQNKRPYQIYCSIIGSTDED-ALLLEESNENVYVNIRHTKDF----HFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 185 y~~~~~~~~~~~v~~~~l~t~~~~-~lv~~~~~~~~~~~~~~SpDg----~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
....+ ..+...+...+... ...+... ......+.|+|+| ++|+..+ .++ .|.+.|+..
T Consensus 187 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~~p~~~~~~~~l~s~~-~dg--~i~iwd~~~ 249 (351)
T 3f3f_A 187 VSALE-----QAIIYQRGKDGKLHVAAKLPGH-KSLIRSISWAPSIGRWYQLIATGC-KDG--RIRIFKITE 249 (351)
T ss_dssp EEETT-----EEEEEEECTTSCEEEEEECCCC-CSCEEEEEECCCSSCSSEEEEEEE-TTS--CEEEEEEEE
T ss_pred EecCC-----CcEEEEccCCCceeeeeecCCC-CcceeEEEECCCCCCcceEEEEEc-CCC--eEEEEeCCC
Confidence 65432 23333333333211 1122222 2234568899998 5554444 333 355555543
No 467
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.00 E-value=0.32 Score=48.72 Aligned_cols=133 Identities=9% Similarity=-0.075 Sum_probs=76.7
Q ss_pred EeeceeeCC-CCCEEEEEEEcCCCcEEEEEEEECCCCceeccC-ccceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSP-DHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP-QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SP-DG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
.+..+.++| ++++|+... .+|. |+++|.......... ....+..+.|+|+++ |+.. .. ...|..+++
T Consensus 144 ~v~~~~~~~~~~~~l~~~~-~d~~----i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~-~~----dg~i~i~d~ 212 (313)
T 3odt_A 144 SVWDAKVVSFSENKFLTAS-ADKT----IKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISC-SN----DGLIKLVDM 212 (313)
T ss_dssp CEEEEEEEETTTTEEEEEE-TTSC----EEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEE-ET----TSEEEEEET
T ss_pred ceeEEEEccCCCCEEEEEE-CCCC----EEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEc-cC----CCeEEEEEC
Confidence 345566777 999887764 4554 888994332222222 244678899999998 5443 22 236888998
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCce-EEEEeecCC
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEG 275 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~~~~dg~ 275 (728)
.+++. ...+.... .....+.++|||+ |+..+. ...|++.|+.++. ....+......+ ...+++++.
T Consensus 213 ~~~~~-~~~~~~~~-~~i~~~~~~~~~~-l~~~~~---dg~v~iwd~~~~~-~~~~~~~~~~~i~~~~~~~~~~ 279 (313)
T 3odt_A 213 HTGDV-LRTYEGHE-SFVYCIKLLPNGD-IVSCGE---DRTVRIWSKENGS-LKQVITLPAISIWSVDCMSNGD 279 (313)
T ss_dssp TTCCE-EEEEECCS-SCEEEEEECTTSC-EEEEET---TSEEEEECTTTCC-EEEEEECSSSCEEEEEECTTSC
T ss_pred Cchhh-hhhhhcCC-ceEEEEEEecCCC-EEEEec---CCEEEEEECCCCc-eeEEEeccCceEEEEEEccCCC
Confidence 87642 22222222 2345688999995 443332 3468999998732 223333222222 234556666
No 468
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.94 E-value=1.5 Score=43.60 Aligned_cols=91 Identities=10% Similarity=0.021 Sum_probs=56.0
Q ss_pred EEEEEEECCCCceeccCc-c--ceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCceeEEeeecCcceEEEEEEc
Q 004839 150 FTLSVRNLNSGALCSKPQ-A--VRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHT 226 (728)
Q Consensus 150 ~~l~v~dl~tg~~~~~~~-~--~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~~~S 226 (728)
..|+++|.++|+.+-... . .....+.++|||+.|+ + . ...|+.+|. +++ ..--+.........++.++
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s-~-----~~~V~~~d~-~G~-~~W~~~~~~~~~~~~~~~~ 85 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-S-Y-----SKGAKMITR-DGR-ELWNIAAPAGCEMQTARIL 85 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-E-C-----BSEEEEECT-TSC-EEEEEECCTTCEEEEEEEC
T ss_pred CEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-e-C-----CCCEEEECC-CCC-EEEEEcCCCCccccccEEC
Confidence 358999999998664332 2 2456788999998554 3 2 235888887 553 1122222211223456789
Q ss_pred CCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 227 KDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 227 pDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
+||+.|+..... ...++.+|.++
T Consensus 86 ~dG~~lv~~~~~--~~~v~~vd~~G 108 (276)
T 3no2_A 86 PDGNALVAWCGH--PSTILEVNMKG 108 (276)
T ss_dssp TTSCEEEEEEST--TEEEEEECTTS
T ss_pred CCCCEEEEecCC--CCEEEEEeCCC
Confidence 999988765541 35678887643
No 469
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.92 E-value=1.3 Score=45.02 Aligned_cols=198 Identities=11% Similarity=0.027 Sum_probs=104.9
Q ss_pred eceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc---------------------cceeeeEEEecCCCEEEE
Q 004839 127 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---------------------AVRVSNIAWAKDGQALIY 185 (728)
Q Consensus 127 ~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~---------------------~~~~~~~~WspDg~~l~y 185 (728)
..+.|+|||+.+ |+ +..+. .|+.+|.++++...... ......+++.+++..||.
T Consensus 22 ~~i~~d~~g~~l-~v-~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 22 NSFTFDSTNKGF-YT-SVQDG---RVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp CCEECCTTCSSE-EE-ECTTS---EEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred eEEEEcCCCCEE-EE-EcCCC---eEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 356689998744 44 33332 37888888765432110 113456788873345766
Q ss_pred EEecCCCCcceeEEEECCCCCceeEEeeecCc--ceEEEEEEcC-CCCEEEEEEcC---------------CCceEEEEE
Q 004839 186 VVTDQNKRPYQIYCSIIGSTDEDALLLEESNE--NVYVNIRHTK-DFHFVCVHTFS---------------TTSSKVFLI 247 (728)
Q Consensus 186 ~~~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~--~~~~~~~~Sp-Dg~~l~~~~~~---------------~~~~~l~~~ 247 (728)
.... ..|++++..++....+....... .+..++.+.+ ||+ |++.... .....|+++
T Consensus 97 ~d~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 97 VDCY-----YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp EETT-----TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred EECC-----CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEE
Confidence 5321 24888886554322222111111 1235678899 896 5555432 123679999
Q ss_pred eCCCCCCCeEEeeec-CCceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEe
Q 004839 248 NAADPFSGLTLIWEC-EGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDF 326 (728)
Q Consensus 248 dl~~~~~~~~~l~~~-~~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~ 326 (728)
|.++ +....+... .......++++|+.||+..... .+|++++++ .......+.+. ..++ ..++.+
T Consensus 171 d~~~--~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~--------~~I~~~~~~-~~~~~~~~~~~-~~~g--P~gi~~ 236 (322)
T 2fp8_A 171 DPST--KETTLLLKELHVPGGAEVSADSSFVLVAEFLS--------HQIVKYWLE-GPKKGTAEVLV-KIPN--PGNIKR 236 (322)
T ss_dssp ETTT--TEEEEEEEEESCCCEEEECTTSSEEEEEEGGG--------TEEEEEESS-STTTTCEEEEE-ECSS--EEEEEE
T ss_pred eCCC--CEEEEeccCCccCcceEECCCCCEEEEEeCCC--------CeEEEEECC-CCcCCccceEE-eCCC--CCCeEE
Confidence 9876 334333322 1112235677888787754422 357787765 22122333332 2222 667776
Q ss_pred eC-CEEEEEEec--------CCeeEEEEEecC
Q 004839 327 CK-THMALILRE--------GRTYRLCSVSLP 349 (728)
Q Consensus 327 ~~-~~lv~~~~~--------~g~~~l~~~~l~ 349 (728)
.. +.|++.... .....|.+++.+
T Consensus 237 d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 237 NADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp CTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred CCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 65 457666544 123567777753
No 470
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.92 E-value=0.23 Score=49.12 Aligned_cols=186 Identities=10% Similarity=-0.075 Sum_probs=99.1
Q ss_pred ceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCccceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCC-
Q 004839 128 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD- 206 (728)
Q Consensus 128 ~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~- 206 (728)
++.++ |+.|..+ . +.... |.++|+++|+.+..........-.-+++++.||... ++...++.+|..+.+
T Consensus 59 GL~~~--~~~Ly~s-t-G~~g~--v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~lt----w~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 59 GLVFH--QGHFFES-T-GHQGT--LRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLT----WTEGLLFTWSGMPPQR 128 (268)
T ss_dssp EEEEE--TTEEEEE-E-TTTTE--EEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEE----SSSCEEEEEETTTTEE
T ss_pred eEEEE--CCEEEEE-c-CCCCE--EEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEE----ccCCEEEEEECCcCcE
Confidence 34455 5656444 3 22223 999999999876543222222333566788887653 455689999998875
Q ss_pred ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE----EEEeecCCEEEEEEc
Q 004839 207 EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH----CIVEHHEGFLYLFTD 282 (728)
Q Consensus 207 ~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~----~~~~~dg~~l~~~tn 282 (728)
..++-+. .. . ..+++||+.|+++. ++++|+.+|.++.+ ....+.-...+.. -.++..++++|.-..
T Consensus 129 ~~ti~~~-~e-G----wGLt~Dg~~L~vSd---Gs~~l~~iDp~T~~-v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw 198 (268)
T 3nok_A 129 ERTTRYS-GE-G----WGLCYWNGKLVRSD---GGTMLTFHEPDGFA-LVGAVQVKLRGQPVELINELECANGVIYANIW 198 (268)
T ss_dssp EEEEECS-SC-C----CCEEEETTEEEEEC---SSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEETTEEEEEET
T ss_pred EEEEeCC-Cc-e----eEEecCCCEEEEEC---CCCEEEEEcCCCCe-EEEEEEeCCCCcccccccccEEeCCEEEEEEC
Confidence 3333332 21 2 24568899887653 36789999998732 2222322111111 112223557775443
Q ss_pred CCccCCCCCceEEEEeeCCCCCCCCCCeEEee------------cCCCceEEEEEeeC--CEEEEEEecCCeeEEEEEe
Q 004839 283 AAKEGQEADNHYLLRCPVDASFPSRTWESVFI------------DDQGLVVEDVDFCK--THMALILREGRTYRLCSVS 347 (728)
Q Consensus 283 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~------------~~~~~~i~~~~~~~--~~lv~~~~~~g~~~l~~~~ 347 (728)
.. -.|.++|.+ + ++....+. ...+..+.+++... +.|+++-. --+.++.+.
T Consensus 199 ~s--------~~I~vIDp~-T---G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK--~Wp~~~ev~ 263 (268)
T 3nok_A 199 HS--------SDVLEIDPA-T---GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK--LWPRLFEVR 263 (268)
T ss_dssp TC--------SEEEEECTT-T---CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET--TCSEEEEEE
T ss_pred CC--------CeEEEEeCC-C---CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC--CCCceEEEE
Confidence 32 258888765 2 22211111 11234577888774 45555432 134555543
No 471
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.90 E-value=1.1 Score=50.46 Aligned_cols=196 Identities=11% Similarity=0.023 Sum_probs=113.3
Q ss_pred ceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCC
Q 004839 128 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGST 205 (728)
Q Consensus 128 ~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~ 205 (728)
.+.+.+.+..|.|+ |.... .|+.++++++....+.. .....+++....++.||++-. ....|.+.++...
T Consensus 353 ~ld~d~~~~~ly~s-D~~~~---~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~----~~~~I~v~~~~G~ 424 (619)
T 3s94_A 353 AIDYDPVEGYIYWT-DDEVR---AIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDT----GTDRIEVTRLNGT 424 (619)
T ss_dssp EEEEETTTTEEEEE-ETTTT---EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET----TTTEEEEEETTSC
T ss_pred EEEEEcCCCeEEEE-eCCCC---eEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeC----CCCcEEEEeCCCC
Confidence 45567766777665 54433 37778887654322211 234456777766788988732 2347888888765
Q ss_pred CceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-C-ceEEEEeecCCEEEEEEcC
Q 004839 206 DEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-G-LAHCIVEHHEGFLYLFTDA 283 (728)
Q Consensus 206 ~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~-~~~~~~~~dg~~l~~~tn~ 283 (728)
....++.+.-+ .-.++.+.|...+|+++.... ...|+..++++ ...+.+.... . .....+++++++||+.-..
T Consensus 425 ~~~~l~~~~l~--~P~~iavdp~~G~ly~tD~g~-~~~I~r~~~dG--~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~ 499 (619)
T 3s94_A 425 MRKILISEDLE--EPRAIVLDPMVGYMYWTDWGE-IPKIERAALDG--SDRVVLVNTSLGWPNGLALDYDEGKIYWGDAK 499 (619)
T ss_dssp SCEEEECTTCC--SEEEEEEETTTTEEEEEECSS-SCEEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred eEEEEEECCCC--CeeeEEEEcCCCcEEEecCCC-CCEEEEEccCC--CccEEEEeCCCCCCeeeEEcccCCEEEEEECC
Confidence 33333322111 124577888877888876533 46799999876 2334443321 1 1233567778899886432
Q ss_pred CccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCCC
Q 004839 284 AKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 284 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
+.+|.+++++ . ..-+.++... -....++++++++||++... ...|.+++..++
T Consensus 500 --------~~~I~~~~~d-G---~~~~~~~~~~-l~~P~glav~~~~ly~tD~~--~~~I~~~~k~~g 552 (619)
T 3s94_A 500 --------TDKIEVMNTD-G---TGRRVLVEDK-IPHIFGFTLLGDYVYWTDWQ--RRSIERVHKRSA 552 (619)
T ss_dssp --------TTEEEEEESS-S---CCCEEEEECC-CCSSCCEEEETTEEEEECTT--SSCEEEEESSSC
T ss_pred --------CCEEEEEecC-C---CceEEEeccC-CCCcEEEEEECCEEEEeecC--CCeEEEEEcCCC
Confidence 2468888876 2 2233443322 12234677788887776543 345777775543
No 472
>1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5
Probab=95.88 E-value=0.045 Score=59.71 Aligned_cols=130 Identities=14% Similarity=0.118 Sum_probs=72.8
Q ss_pred CcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHH--------------------CCeEEEEEcC-CC
Q 004839 477 GISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLD--------------------RGWVVAFADV-RG 535 (728)
Q Consensus 477 G~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~--------------------~Gy~v~~~d~-RG 535 (728)
+..+..|++...+.......|++++++||||.+... -.|.+ +-..++..|. .|
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~~------g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvG 121 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMD------GALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTG 121 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHH------HHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTT
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhhh------hhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCC
Confidence 567777776544222234579999999999965321 11111 2367899996 56
Q ss_pred CC-CCCCcccccccc---CCCCC---cHHHHHHHHH-HHHHcCCCCCCcEEEEEeCccHHHHHHHHHh------C-----
Q 004839 536 GG-GGGKKWHHDGRR---TKKLN---SIKDFISCAR-FLIEKEIVKEHKLAGWGYSAGGLLVAAAINC------C----- 596 (728)
Q Consensus 536 ~g-~~G~~~~~~~~~---~~~~~---~~~D~~~~~~-~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~------~----- 596 (728)
.| .|+..-. .+.. ..... ...|+...++ |+...+.....++.|+|.||||..+..++.. .
T Consensus 122 tGfSy~~~~~-~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~ 200 (483)
T 1ac5_A 122 TGFSVEQNKD-EGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDG 200 (483)
T ss_dssp STTCSSCCSS-GGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTT
T ss_pred ccccCCcCcc-cccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccC
Confidence 55 2222100 0000 01111 1233333333 3333343445789999999999988776531 1
Q ss_pred C-CceeEEEEeCCcccch
Q 004839 597 P-DLFRAVVLEVPFLDAT 613 (728)
Q Consensus 597 p-~~f~a~v~~~p~~d~~ 613 (728)
+ =-+++++...|++|..
T Consensus 201 ~~inLkGi~IGNg~~d~~ 218 (483)
T 1ac5_A 201 DTYDLKALLIGNGWIDPN 218 (483)
T ss_dssp SCCEEEEEEEEEECCCHH
T ss_pred cccceeeeEecCCcccch
Confidence 1 2378888888887653
No 473
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.87 E-value=2.3 Score=45.17 Aligned_cols=182 Identities=10% Similarity=0.051 Sum_probs=95.5
Q ss_pred CCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCceeEE
Q 004839 134 DHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALL 211 (728)
Q Consensus 134 DG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~~~lv 211 (728)
++++|+... .+| .|+++|+.+++.+.... ...+..+.| |++.|+....+ ..|...|+.++.. ...
T Consensus 208 ~~~~l~s~s-~dg----~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-----g~i~iwd~~~~~~-~~~ 274 (445)
T 2ovr_B 208 HEKRVVSGS-RDA----TLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD-----FMVKVWDPETETC-LHT 274 (445)
T ss_dssp ETTEEEEEE-TTS----EEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT-----SCEEEEEGGGTEE-EEE
T ss_pred cCCEEEEEe-CCC----EEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC-----CEEEEEECCCCcE-eEE
Confidence 566776653 444 49999999987654322 334556667 77766655322 3677888876531 112
Q ss_pred eeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCCEEEEEEcCCccCCCCC
Q 004839 212 LEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKEGQEAD 291 (728)
Q Consensus 212 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~~~~~~ 291 (728)
+..... ....+.+ |+++|+..+.+ ..|.+.|+.++ +..............+..+++.|+..+. ++
T Consensus 275 ~~~~~~-~v~~~~~--~~~~l~~~~~d---~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~~l~~~~~-dg------ 339 (445)
T 2ovr_B 275 LQGHTN-RVYSLQF--DGIHVVSGSLD---TSIRVWDVETG--NCIHTLTGHQSLTSGMELKDNILVSGNA-DS------ 339 (445)
T ss_dssp ECCCSS-CEEEEEE--CSSEEEEEETT---SCEEEEETTTC--CEEEEECCCCSCEEEEEEETTEEEEEET-TS------
T ss_pred ecCCCC-ceEEEEE--CCCEEEEEeCC---CeEEEEECCCC--CEEEEEcCCcccEEEEEEeCCEEEEEeC-CC------
Confidence 222222 2334444 88888766653 35888898773 3333223333333345566775554433 22
Q ss_pred ceEEEEeeCCCCCCCCCCeEEeec-CCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCCC
Q 004839 292 NHYLLRCPVDASFPSRTWESVFID-DQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~~li~~-~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
.|...++. . ......+..+ .....+..+.+.++. +++...+| .|.++++.++
T Consensus 340 --~i~vwd~~-~--~~~~~~~~~~~~~~~~v~~~~~~~~~-l~s~~~dg--~v~iwd~~~~ 392 (445)
T 2ovr_B 340 --TVKIWDIK-T--GQCLQTLQGPNKHQSAVTCLQFNKNF-VITSSDDG--TVKLWDLKTG 392 (445)
T ss_dssp --CEEEEETT-T--CCEEEEECSTTSCSSCEEEEEECSSE-EEEEETTS--EEEEEETTTC
T ss_pred --eEEEEECC-C--CcEEEEEccCCCCCCCEEEEEECCCE-EEEEeCCC--eEEEEECCCC
Confidence 24444443 1 1112222111 123456677776554 44445555 4666776654
No 474
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.86 E-value=3 Score=47.02 Aligned_cols=197 Identities=8% Similarity=0.047 Sum_probs=113.1
Q ss_pred ceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--------cceeeeEEEecCCCEEEEEEecCCCCcceeEE
Q 004839 128 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--------AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 199 (728)
Q Consensus 128 ~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--------~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~ 199 (728)
.+.+.+.+++|.|+ |...+ .|+..++.+.....+.. .....+++....++.||++.. ....|.+
T Consensus 344 ~ld~d~~~~~iy~s-D~~~~---~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~----~~~~I~v 415 (628)
T 4a0p_A 344 AIDYDPLDKQLYWI-DSRQN---MIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCE----ATNVINV 415 (628)
T ss_dssp EEEEETTTTEEEEE-ETTTT---EEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEET----TTTEEEE
T ss_pred EEEEecCCCeEEEE-ecCcc---eEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcC----CCCEEEE
Confidence 34556666666554 44332 36666666543221111 123557778778889988742 2346888
Q ss_pred EECCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC-C-ceEEEEeecCCEE
Q 004839 200 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-G-LAHCIVEHHEGFL 277 (728)
Q Consensus 200 ~~l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~-~-~~~~~~~~dg~~l 277 (728)
.++.......++....+ .--++.+.|...+|+|+........|++.++++ ...+.+.... . .....+++++++|
T Consensus 416 ~~~~G~~~~~l~~~~l~--~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG--~~~~~l~~~~l~~P~gla~D~~~~~L 491 (628)
T 4a0p_A 416 TRLDGRSVGVVLKGEQD--RPRAVVVNPEKGYMYFTNLQERSPKIERAALDG--TEREVLFFSGLSKPIALALDSRLGKL 491 (628)
T ss_dssp EETTSCEEEEEEECTTC--CEEEEEEETTTTEEEEEEEETTEEEEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred EECCCCeEEEEEeCCCC--ceeeEEEecCCCeEEEeecCCCCCeEEEEeCCC--CCcEEEEeccCCCccEEEEeCCCCEE
Confidence 88754322233322222 224577888777888876543334899999976 3344444322 1 1234567778899
Q ss_pred EEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCCC
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
|+..... ..|.+++++ +....++....-....+++.++++||++.... ..|.+++..++
T Consensus 492 Yw~D~~~--------~~I~~~~~d-----G~~r~~~~~~~~~~P~glav~~~~ly~tD~~~--~~i~~~~k~~G 550 (628)
T 4a0p_A 492 FWADSDL--------RRIESSDLS-----GANRIVLEDSNILQPVGLTVFENWLYWIDKQQ--QMIEKIDMTGR 550 (628)
T ss_dssp EEEETTT--------TEEEEEETT-----SCSCEEEECSSCSCEEEEEEETTEEEEEETTT--TEEEEEETTSS
T ss_pred EEEeCCC--------CEEEEEeCC-----CCceEEEEcCCCCCcEEEEEECCEEEEEECCC--CeEEEEECcCC
Confidence 8864432 468888876 22233333222234678888999998887544 46777876544
No 475
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.81 E-value=0.13 Score=53.45 Aligned_cols=163 Identities=18% Similarity=0.193 Sum_probs=88.9
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc------c-------------------------ceeeeE
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ------A-------------------------VRVSNI 174 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~------~-------------------------~~~~~~ 174 (728)
+..+.++|++..+ |..+..+.....|+++|+++|+...... . .....+
T Consensus 122 ~~~v~vd~~~g~~-yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gi 200 (343)
T 2qe8_A 122 VNDLAVDLIHNFV-YISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGI 200 (343)
T ss_dssp CCEEEEETTTTEE-EEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEE
T ss_pred cceEEEecCCCEE-EEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceeccccee
Confidence 4567889887755 5556532223469999999886543210 0 123568
Q ss_pred EEecCCCEEEEEEecCCCCcceeEEEECCC---CC--cee-----EEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEE
Q 004839 175 AWAKDGQALIYVVTDQNKRPYQIYCSIIGS---TD--EDA-----LLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKV 244 (728)
Q Consensus 175 ~WspDg~~l~y~~~~~~~~~~~v~~~~l~t---~~--~~~-----lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l 244 (728)
+|+|||+.||+.... ..+||+++... +. ... ...... ..-.++.+++||+ |++.... .+.|
T Consensus 201 a~s~dg~~ly~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~--g~pdgia~d~~G~-l~va~~~--~~~V 271 (343)
T 2qe8_A 201 VLDAENEWLYLSPMH----STSMYRIKSADLSNLQLTDAELGSKIERYSEK--PICDGISIDKDHN-IYVGDLA--HSAI 271 (343)
T ss_dssp EECTTSCEEEEEESS----CSEEEEEEHHHHTCTTCCHHHHHTTCEEEEEC--CSCSCEEECTTCC-EEEEEGG--GTEE
T ss_pred EeccCCCEEEEEeCC----CCeEEEEEHHHhcCCCCChhhhhcceEecccC--CCCceEEECCCCC-EEEEccC--CCeE
Confidence 999999999887543 23789887521 10 000 111111 1112467899986 4444332 3579
Q ss_pred EEEeCCCCCCCeEEeeecC--C-ceEEEEeecCCEEEEEEcCCccC--------CCCCceEEEEeeCC
Q 004839 245 FLINAADPFSGLTLIWECE--G-LAHCIVEHHEGFLYLFTDAAKEG--------QEADNHYLLRCPVD 301 (728)
Q Consensus 245 ~~~dl~~~~~~~~~l~~~~--~-~~~~~~~~dg~~l~~~tn~~~~~--------~~~~~~~l~~~~~~ 301 (728)
+++|.++ ++...+.... . .....++++ +.||+.++..... ....+++|+++++.
T Consensus 272 ~~~d~~~--G~~~~~~~~~~~~~p~~va~~~~-g~l~v~~~~~~~~~~f~~~~~~~~~~~~i~~~~~~ 336 (343)
T 2qe8_A 272 GVITSAD--RAYKLLVTDEKLSWTDSFNFGSD-GYLYFDCNQLHHSAPLNAGENISAPPYYIFRLKPL 336 (343)
T ss_dssp EEEETTT--TEEEEEEECGGGSCEEEEEECTT-SCEEEEECCGGGSGGGBTTCCCCCSCEEEEEECCS
T ss_pred EEEECCC--CCEEEEEECCceecCCeeEECCC-CcEEEEeCccccccccccCCCcCcCCeEEEEEECC
Confidence 9999844 3444444321 1 122344454 5688887743210 11124777777654
No 476
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.088 Score=62.61 Aligned_cols=113 Identities=5% Similarity=0.048 Sum_probs=73.8
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceecc----------C---ccceeeeEEEecCCCEEEEEEecCC
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK----------P---QAVRVSNIAWAKDGQALIYVVTDQN 191 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~----------~---~~~~~~~~~WspDg~~l~y~~~~~~ 191 (728)
.+..+.|||||++||... .+|. |+++|+++++.... . ....+..++|+|++..++.+...
T Consensus 100 ~V~~v~~sp~g~~l~sgs-~dg~----V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~-- 172 (902)
T 2oaj_A 100 KITSIDTDASLDWMLIGL-QNGS----MIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE-- 172 (902)
T ss_dssp CEEEEECCTTCSEEEEEE-TTSC----EEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS--
T ss_pred CEEEEEECCCCCEEEEEc-CCCc----EEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeC--
Confidence 467788999999998874 5554 99999999875311 1 12356789999986555555433
Q ss_pred CCcceeEEEECCCCCceeEEeeec-----------------CcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 192 KRPYQIYCSIIGSTDEDALLLEES-----------------NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 192 ~~~~~v~~~~l~t~~~~~lv~~~~-----------------~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
...| ..|+.++... ..+... .......+.|+|||++|+..+.+. .|.+.|+.+
T Consensus 173 --dg~v-lWd~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg---~i~lWd~~~ 242 (902)
T 2oaj_A 173 --YVTL-TYSLVENEIK-QSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN---SLVFWDANS 242 (902)
T ss_dssp --SCEE-EEETTTTEEE-EEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC---CEEEEETTT
T ss_pred --CCcE-EEECCCCceE-EEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC---eEEEEECCC
Confidence 2357 8888776421 122111 012356789999999887665543 477888876
No 477
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=95.76 E-value=0.23 Score=52.54 Aligned_cols=73 Identities=10% Similarity=-0.023 Sum_probs=50.2
Q ss_pred EeeceeeCC--------CCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCc
Q 004839 125 YEELSEVSP--------DHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRP 194 (728)
Q Consensus 125 ~~~~~~~SP--------DG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~ 194 (728)
.+..+.||| ||++||-.. .++ +|+|+|+.++....... ...+..++|+|++..++.+...+
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s-~D~----tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d---- 208 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVG-DDC----TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN---- 208 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEE-TTS----EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT----
T ss_pred ceEEEEEccccccccCCCCCEEEEEE-CCC----eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC----
Confidence 467788988 999998764 333 49999998876443222 34567899999987666664432
Q ss_pred ceeEEEECCCCC
Q 004839 195 YQIYCSIIGSTD 206 (728)
Q Consensus 195 ~~v~~~~l~t~~ 206 (728)
..|...|+.+++
T Consensus 209 ~~v~~wd~~t~~ 220 (393)
T 4gq1_A 209 GNIRIFDWTLNL 220 (393)
T ss_dssp SEEEEEETTCCC
T ss_pred CEEEEEECCCCc
Confidence 357777776653
No 478
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.76 E-value=0.46 Score=47.81 Aligned_cols=158 Identities=9% Similarity=0.006 Sum_probs=85.6
Q ss_pred eeceeeCCCCCEEEEEEEcCC-----------CcEEEEEEEECCCCceeccCc-cceeeeEEEe----cCCCEEEEEEec
Q 004839 126 EELSEVSPDHKFLAYTMYDKD-----------NDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWA----KDGQALIYVVTD 189 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g-----------~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~Ws----pDg~~l~y~~~~ 189 (728)
...+.++|||+.. ++....+ .....|+.+|.+ |+...... ......++|+ |||+.||++...
T Consensus 119 ~~~i~~d~~g~l~-v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~ 196 (314)
T 1pjx_A 119 CNDCAFDYEGNLW-ITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP 196 (314)
T ss_dssp CCEEEECTTSCEE-EEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT
T ss_pred CcCEEECCCCCEE-EEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECC
Confidence 4567889999743 3322110 011458889987 65443321 2234678999 999878776422
Q ss_pred CCCCcceeEEEECC-CCC-ce-eEEeeecCc--ceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCC
Q 004839 190 QNKRPYQIYCSIIG-STD-ED-ALLLEESNE--NVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG 264 (728)
Q Consensus 190 ~~~~~~~v~~~~l~-t~~-~~-~lv~~~~~~--~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~ 264 (728)
...|+++++. ++. .. .....-... ....++.+++||+. ++.... ...|+++|.+++. ....+.....
T Consensus 197 ----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l-~v~~~~--~~~i~~~d~~~g~-~~~~~~~~~~ 268 (314)
T 1pjx_A 197 ----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNL-LVANWG--SSHIEVFGPDGGQ-PKMRIRCPFE 268 (314)
T ss_dssp ----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCE-EEEEET--TTEEEEECTTCBS-CSEEEECSSS
T ss_pred ----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCE-EEEEcC--CCEEEEEcCCCCc-EeEEEeCCCC
Confidence 3478888875 332 11 111111111 22346788999974 443322 2468999987422 2233322212
Q ss_pred c-eEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCC
Q 004839 265 L-AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVD 301 (728)
Q Consensus 265 ~-~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~ 301 (728)
. ....++++|+.||+.+... ..|++++.+
T Consensus 269 ~~~~i~~~~dg~~l~v~~~~~--------~~l~~~~~~ 298 (314)
T 1pjx_A 269 KPSNLHFKPQTKTIFVTEHEN--------NAVWKFEWQ 298 (314)
T ss_dssp CEEEEEECTTSSEEEEEETTT--------TEEEEEECS
T ss_pred CceeEEECCCCCEEEEEeCCC--------CeEEEEeCC
Confidence 1 2233467777788766543 247777665
No 479
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.69 E-value=0.17 Score=55.92 Aligned_cols=99 Identities=9% Similarity=0.017 Sum_probs=61.1
Q ss_pred cEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCC---------------------------------
Q 004839 148 DYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKR--------------------------------- 193 (728)
Q Consensus 148 e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~--------------------------------- 193 (728)
....+-++|.++.+...... .+....++.+|||+++|.+..+...-
T Consensus 173 ~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 173 YVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred cCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 35679999999987654433 23557789999999998887654210
Q ss_pred cceeEEEECCC--CCc-eeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 194 PYQIYCSIIGS--TDE-DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 194 ~~~v~~~~l~t--~~~-~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
...|-.+|..+ +.. -..+ ...... .++.+|||||+++++.. ..+.+.++|+++
T Consensus 253 i~~V~VID~~~~~~~~~~~~I-pvg~~P--hGv~~sPDGk~v~V~~~--~s~~VsVid~~~ 308 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYI-PIANNP--HGCNMAPDKKHLCVAGK--LSPTVTVLDVTR 308 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEE-EEESSC--CCEEECTTSSEEEEECT--TSSBEEEEEGGG
T ss_pred ECcEEEEeCcccCCceeEEEE-ecCCCc--eEEEEcCCCCEEEEeCC--CCCeEEEEECcc
Confidence 01244555554 211 1111 111111 24688999999887544 346788899874
No 480
>1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5
Probab=95.67 E-value=0.074 Score=52.83 Aligned_cols=145 Identities=10% Similarity=-0.032 Sum_probs=78.5
Q ss_pred EEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCc-ccHHH----------------HHHHHHCCeEEE
Q 004839 467 CEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDK-RWRSE----------------LKSLLDRGWVVA 529 (728)
Q Consensus 467 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~----------------~~~l~~~Gy~v~ 529 (728)
.--+.+....|..+..|++..... .....|++++++||||.+... ....+ ...|. +-..++
T Consensus 26 sGyv~v~~~~~~~lFywf~es~~~-~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~-~~anll 103 (270)
T 1gxs_A 26 GGYVTIDDNNGRALYYWFQEADTA-DPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWN-KAANIL 103 (270)
T ss_dssp EEEEEEETTTTEEEEEEEECCCSS-CGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGG-GTSEEE
T ss_pred EEEEEcCCCCCcEEEEEEEEecCC-CCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchh-ccccEE
Confidence 334566666677787776654122 234579999999999976432 11100 00111 125788
Q ss_pred EEcCCCCCCCCCccccccccCCCCCcHHHHHHHHHH-HHHcCCCCCCcEEEEEeCccHHHHHHHH--HhCC-----Ccee
Q 004839 530 FADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARF-LIEKEIVKEHKLAGWGYSAGGLLVAAAI--NCCP-----DLFR 601 (728)
Q Consensus 530 ~~d~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~-l~~~~~~d~~ri~i~G~S~GG~~~~~~~--~~~p-----~~f~ 601 (728)
..|.+-+.||...-..............|+...++. +.+.+.....++.|.|.| |=++...+. .++. =-++
T Consensus 104 fiDqPvGtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLk 182 (270)
T 1gxs_A 104 FAESPAGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQ 182 (270)
T ss_dssp EECCSTTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEE
T ss_pred EEeccccccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeee
Confidence 999543333322111111100101125566655554 344444556789999999 655443322 1221 2479
Q ss_pred EEEEeCCcccchh
Q 004839 602 AVVLEVPFLDATN 614 (728)
Q Consensus 602 a~v~~~p~~d~~~ 614 (728)
++++..|++|...
T Consensus 183 Gi~ign~~~d~~~ 195 (270)
T 1gxs_A 183 GLLVSSGLTNDHE 195 (270)
T ss_dssp EEEEESCCCBHHH
T ss_pred eEEEeCCccChhh
Confidence 9999999998753
No 481
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.65 E-value=0.45 Score=51.08 Aligned_cols=157 Identities=15% Similarity=0.195 Sum_probs=89.3
Q ss_pred EeeceeeCC-CCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 125 YEELSEVSP-DHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 125 ~~~~~~~SP-DG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
....+.++| ++..| |..+.. ..|+++|++++....+.. ......++|++||+.||.+..........++..+.
T Consensus 138 ~P~~lavdp~~~g~L-yv~d~~----~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHL-YLVGEQ----HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEE-EEEEBT----EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeE-EEEeCC----CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 445678898 46655 555654 569999999887554432 33467899999999887775432212224555554
Q ss_pred CCCCc-eeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC---CceEEEEeecCCEEE
Q 004839 203 GSTDE-DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE---GLAHCIVEHHEGFLY 278 (728)
Q Consensus 203 ~t~~~-~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~---~~~~~~~~~dg~~l~ 278 (728)
...-. ...+.....+ .++.++|++.+|++.... ..+|++++.++ +....+.... ......++++|++||
T Consensus 213 ~g~~~~~~~l~~~~~p---~giavdp~~g~lyv~d~~--~~~V~~~~~~~--~~~~~~~~~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 213 ESGFKVITELTKGQNC---NGAETHPINGELYFNSWN--AGQVFRYDFTT--QETTPLFTIQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp GGTSCSEEEEEECSSC---CCEEECTTTCCEEEEETT--TTEEEEEETTT--TEEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred CCceeeeeeeccCCCc---eEEEEeCCCCEEEEEECC--CCEEEEEECCC--CcEEEEEEcCCCCcceeEEEcCCCCEEE
Confidence 32211 1122111111 246789955567766543 34799999986 3332232221 122345678888788
Q ss_pred EEEcCCccCCCCCceEEEEeeCC
Q 004839 279 LFTDAAKEGQEADNHYLLRCPVD 301 (728)
Q Consensus 279 ~~tn~~~~~~~~~~~~l~~~~~~ 301 (728)
+..... .+|++++.+
T Consensus 286 v~d~~~--------~~I~~~~~d 300 (430)
T 3tc9_A 286 IVVVNQ--------HYILRSDYD 300 (430)
T ss_dssp EEETTT--------TEEEEEEEE
T ss_pred EEECCC--------CEEEEEeCC
Confidence 764432 356666544
No 482
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.65 E-value=1.1 Score=48.11 Aligned_cols=157 Identities=11% Similarity=0.054 Sum_probs=87.6
Q ss_pred EeeceeeCCC--CCEEEEEEEcCCCcEEEEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEE
Q 004839 125 YEELSEVSPD--HKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 201 (728)
Q Consensus 125 ~~~~~~~SPD--G~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~ 201 (728)
....+.|+|| +..| |..+.. ..|+.+|+++|+...... ......++|++||+ ||++..........++..+
T Consensus 140 ~P~gvavd~~s~~g~L-yv~D~~----~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDL-YWVGQR----DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCCEEEECTTTTTCEE-EEECBT----SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEEC
T ss_pred CCceEEEccccCCCEE-EEEeCC----CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEE
Confidence 4456789995 4555 444654 349999999888665433 33567899999999 7766432111123355555
Q ss_pred CCCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCe-EEeee-cCCc--eEEEEeecCCEE
Q 004839 202 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL-TLIWE-CEGL--AHCIVEHHEGFL 277 (728)
Q Consensus 202 l~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~-~~l~~-~~~~--~~~~~~~dg~~l 277 (728)
............... ...++.++|++..|++... ....|+++|.++ +.. ..+.. .... ....++++|+.|
T Consensus 214 ~~~~~~~~~~~~~~~--~P~giavd~~~G~lyv~d~--~~~~V~~~d~~~--g~~~~~~~~~~~~~~~~~ia~dpdG~~L 287 (433)
T 4hw6_A 214 RASGFTERLSLCNAR--GAKTCAVHPQNGKIYYTRY--HHAMISSYDPAT--GTLTEEEVMMDTKGSNFHIVWHPTGDWA 287 (433)
T ss_dssp GGGTTCCEEEEEECS--SBCCCEECTTTCCEEECBT--TCSEEEEECTTT--CCEEEEEEECSCCSSCEEEEECTTSSEE
T ss_pred CCCCeeccccccccC--CCCEEEEeCCCCeEEEEEC--CCCEEEEEECCC--CeEEEEEeccCCCCCcccEEEeCCCCEE
Confidence 432221111111111 1124577885555666543 235799999986 333 22222 1111 124567888888
Q ss_pred EEEEcCCccCCCCCceEEEEeeCC
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVD 301 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~ 301 (728)
|+..... .+|++++.+
T Consensus 288 Yvad~~~--------~~I~~~~~d 303 (433)
T 4hw6_A 288 YIIYNGK--------HCIYRVDYN 303 (433)
T ss_dssp EEEETTT--------TEEEEEEBC
T ss_pred EEEeCCC--------CEEEEEeCC
Confidence 8765432 457776654
No 483
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.62 E-value=0.082 Score=60.85 Aligned_cols=176 Identities=7% Similarity=0.015 Sum_probs=98.1
Q ss_pred EEEEEECCCCceeccCc-cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCC----CCceeEEeeecCcceEEEEEE
Q 004839 151 TLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS----TDEDALLLEESNENVYVNIRH 225 (728)
Q Consensus 151 ~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t----~~~~~lv~~~~~~~~~~~~~~ 225 (728)
.|+++++++++...+.. ......++|.+++..||++.. ...+|+++++.+ .....++..... .-.++++
T Consensus 387 ~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~----~~~~I~~~~~~g~~~~~~~~~~i~~~~~--~P~glav 460 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL----SQRMICSTQLDRAHGVSSYDTVISRDIQ--APDGLAV 460 (699)
T ss_dssp C-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCT----TTTSBEEEESCCCCC-CCCCCBCCSCC----CCCEEC
T ss_pred ceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEec----CCCeEEEEecCCCCCCcceEEEEeCCCC--CcceEEE
Confidence 48889998887655433 345678999998888988632 234799999875 222222211110 1123566
Q ss_pred cCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC--CceEEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCC
Q 004839 226 TKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE--GLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDAS 303 (728)
Q Consensus 226 SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~--~~~~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~ 303 (728)
.+.++.|+++.. ....|+++++++ ...+.+.... ......+++.++.||+..... +.+|++++.+ .
T Consensus 461 D~~~g~LY~tD~--~~~~I~v~d~dg--~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~-------~~~I~~~~~d-G 528 (699)
T 1n7d_A 461 DWIHSNIYWTDS--VLGTVSVADTKG--VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT-------PAKIKKGGLN-G 528 (699)
T ss_dssp CCSSSBCEECCT--TTSCEEEEBSSS--CCEEEECCCSSCCCCCEECCSSSSCCEECCCSS-------SCCEEBCCSS-S
T ss_pred EeeCCcEEEEec--cCCeEEEEecCC--CceEEEEeCCCCCcceEEEccCCCcEEEcccCC-------CCeEEEEeCC-C
Confidence 766677776533 235689999876 3334443221 112234567778777643221 2458887765 1
Q ss_pred CCCCCCeEEeecCCCceEEEEEee--CCEEEEEEecCCeeEEEEEecCC
Q 004839 304 FPSRTWESVFIDDQGLVVEDVDFC--KTHMALILREGRTYRLCSVSLPL 350 (728)
Q Consensus 304 ~~~~~~~~li~~~~~~~i~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~ 350 (728)
...+.++.. .-....++.+. ++.||+.... ..+|.++++++
T Consensus 529 ---~~~~~l~~~-~l~~PnGlavd~~~~~LY~aD~~--~~~I~~~d~dG 571 (699)
T 1n7d_A 529 ---VDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSK--LHSISSIDVNG 571 (699)
T ss_dssp ---CCCCEESCS-SCSSCCCEEECTTTCCEEEEETT--TTEEEEECSSS
T ss_pred ---CCeeEEEeC-CCCCccEEEEeccCCEEEEEecC--CCeEEEEccCC
Confidence 122233222 11223456665 5678877643 45788888763
No 484
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=95.48 E-value=0.23 Score=52.45 Aligned_cols=146 Identities=9% Similarity=0.045 Sum_probs=71.7
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc---------------------------cceeeeEEEe
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---------------------------AVRVSNIAWA 177 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~---------------------------~~~~~~~~Ws 177 (728)
.+..++|+|++..+..+...+| .|+++|+.+++...... ...+..+.|+
T Consensus 188 ~v~~v~~~p~~~~~l~~~~~d~----~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~ 263 (393)
T 4gq1_A 188 PGISVQFRPSNPNQLIVGERNG----NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWI 263 (393)
T ss_dssp CEEEEEEETTEEEEEEEEETTS----EEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEE
T ss_pred CcEEEEECCCCCceEEecCCCC----EEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeee
Confidence 4557889999975555545555 49999999886432110 1123456665
Q ss_pred -cCCCEEEEEEecCCCCcceeEEEECCCCCceeEEee----------ecC------cceEEEEEEc-CCCCEEEEEEcCC
Q 004839 178 -KDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLE----------ESN------ENVYVNIRHT-KDFHFVCVHTFST 239 (728)
Q Consensus 178 -pDg~~l~y~~~~~~~~~~~v~~~~l~t~~~~~lv~~----------~~~------~~~~~~~~~S-pDg~~l~~~~~~~ 239 (728)
+||+.|+-... ...+.+.++.++.....+.. .++ ..+.....++ +.++.+++....
T Consensus 264 ~~dg~~l~s~s~-----d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~- 337 (393)
T 4gq1_A 264 GSDGSGILAMCK-----SGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ- 337 (393)
T ss_dssp TTTTCEEEEECT-----TSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT-
T ss_pred cCCCCEEEEEeC-----CCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC-
Confidence 89987765422 22455556654321100000 000 0000111223 334444444332
Q ss_pred CceEEEEEeCCCCCCCeEEeeecCCce-EEEEeecCCEEEEEEc
Q 004839 240 TSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEGFLYLFTD 282 (728)
Q Consensus 240 ~~~~l~~~dl~~~~~~~~~l~~~~~~~-~~~~~~dg~~l~~~tn 282 (728)
...|++.|+.++.. ...+......+ ...+++||+.|+..++
T Consensus 338 -Dg~V~lwd~~~~~~-~~~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 338 -HGLIQLINTYEKDS-NSIPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp -TTEEEEEETTCTTC-CEEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred -CCEEEEEECCCCcE-EEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 24688889887532 22333333333 3467799998887765
No 485
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.47 E-value=0.45 Score=49.14 Aligned_cols=122 Identities=9% Similarity=0.086 Sum_probs=69.3
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--------cceeeeEEEecCCCEEEEEEecC-CCCcce
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--------AVRVSNIAWAKDGQALIYVVTDQ-NKRPYQ 196 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--------~~~~~~~~WspDg~~l~y~~~~~-~~~~~~ 196 (728)
...+.+||||+.++ +..+.++....|+.++ +|+..+... ......+++++||+ ||.+-... .....+
T Consensus 19 p~~va~~~~g~~~v-~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 19 PGNITLTPDGRLFL-SLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVPK 94 (343)
T ss_dssp EEEEEECTTSCEEE-EECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCCE
T ss_pred cceEEECCCCCEEE-EeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCCe
Confidence 44667999998543 2222111114577777 565442210 12457789999985 76653210 001357
Q ss_pred eEEEECCCCC-ceeEEeeec---CcceEEEEEEcCCCCEEEEEEcCC-CceEEEEEeCCC
Q 004839 197 IYCSIIGSTD-EDALLLEES---NENVYVNIRHTKDFHFVCVHTFST-TSSKVFLINAAD 251 (728)
Q Consensus 197 v~~~~l~t~~-~~~lv~~~~---~~~~~~~~~~SpDg~~l~~~~~~~-~~~~l~~~dl~~ 251 (728)
|+++|+.+++ ...+.+.+. ...+..++.+++++..++++..+. ....|+++|+++
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence 9999998775 222222211 112335678888877777765422 346799999876
No 486
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.46 E-value=2.2 Score=42.06 Aligned_cols=188 Identities=13% Similarity=0.020 Sum_probs=97.5
Q ss_pred eeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc---cceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
...+.++|||+.. ++ +..++ .|+++|+ +|+...... ......+++.+||+ |+++.. ....|++++.
T Consensus 101 ~~~i~~~~~g~l~-v~-~~~~~---~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~----~~~~i~~~~~ 169 (299)
T 2z2n_A 101 PYGITEGPNGDIW-FT-EMNGN---RIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWFTEN----QNNAIGRITE 169 (299)
T ss_dssp EEEEEECTTSCEE-EE-ETTTT---EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEEEET----TTTEEEEECT
T ss_pred ceeeEECCCCCEE-EE-ecCCc---eEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEEEeC----CCCEEEEEcC
Confidence 4456788998733 33 33332 3888898 665443221 23456788999985 666532 2347999988
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeec-C-Cce-EEEEeecCCEEEE
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWEC-E-GLA-HCIVEHHEGFLYL 279 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~-~-~~~-~~~~~~dg~~l~~ 279 (728)
++........ .......++.++++|+ |++.... ...|+++|. + +....+... . ... ...++++| .+|+
T Consensus 170 -~g~~~~~~~~-~~~~~~~~i~~~~~g~-l~v~~~~--~~~i~~~~~-~--g~~~~~~~~~~~~~~~~i~~~~~g-~l~v 240 (299)
T 2z2n_A 170 -SGDITEFKIP-TPASGPVGITKGNDDA-LWFVEII--GNKIGRITT-S--GEITEFKIPTPNARPHAITAGAGI-DLWF 240 (299)
T ss_dssp -TCCEEEEECS-STTCCEEEEEECTTSS-EEEEETT--TTEEEEECT-T--CCEEEEECSSTTCCEEEEEECSTT-CEEE
T ss_pred -CCcEEEeeCC-CCCCcceeEEECCCCC-EEEEccC--CceEEEECC-C--CcEEEEECCCCCCCceeEEECCCC-CEEE
Confidence 5432221111 1112234678899998 4554432 347899998 4 334433222 1 111 22344554 4666
Q ss_pred EEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecC
Q 004839 280 FTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLP 349 (728)
Q Consensus 280 ~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 349 (728)
..... ..|.+++.. .....+..+.....+..+...++.|++....+ .|.+++..
T Consensus 241 ~~~~~--------~~i~~~d~~-----g~~~~~~~~~~~~~~~~i~~~~g~l~v~~~~~---~l~~~~~~ 294 (299)
T 2z2n_A 241 TEWGA--------NKIGRLTSN-----NIIEEYPIQIKSAEPHGICFDGETIWFAMECD---KIGKLTLI 294 (299)
T ss_dssp EETTT--------TEEEEEETT-----TEEEEEECSSSSCCEEEEEECSSCEEEEETTT---EEEEEEEC
T ss_pred eccCC--------ceEEEECCC-----CceEEEeCCCCCCccceEEecCCCEEEEecCC---cEEEEEcC
Confidence 54332 246666643 22333211222234555555446677665433 45556543
No 487
>4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A*
Probab=95.42 E-value=0.16 Score=51.18 Aligned_cols=139 Identities=14% Similarity=0.019 Sum_probs=78.9
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHH----------------HHHHHHCCeEEEEEcCCC
Q 004839 472 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSE----------------LKSLLDRGWVVAFADVRG 535 (728)
Q Consensus 472 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~----------------~~~l~~~Gy~v~~~d~RG 535 (728)
+.-.++..+..|++..+.. ....|+||++-||||.+...+...+ ...|. +-..++.+|.+-
T Consensus 28 v~v~~~~~lFywf~es~~~--p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~-~~an~lfiD~Pv 104 (300)
T 4az3_A 28 LKGSGSKHLHYWFVESQKD--PENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWN-LIANVLYLESPA 104 (300)
T ss_dssp EECSTTEEEEEEEECCSSC--TTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGG-GSSEEEEECCST
T ss_pred eecCCCCeEEEEEEEcCCC--CCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHH-hhhcchhhcCCC
Confidence 4445677787777655432 2457999999999986532111000 00111 125678888765
Q ss_pred CCCCCCccccccccCCCCCcHHHHHHHHH-HHHHcCCCCCCcEEEEEeCccHHHHHHHHHh---CCC-ceeEEEEeCCcc
Q 004839 536 GGGGGKKWHHDGRRTKKLNSIKDFISCAR-FLIEKEIVKEHKLAGWGYSAGGLLVAAAINC---CPD-LFRAVVLEVPFL 610 (728)
Q Consensus 536 ~g~~G~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~---~p~-~f~a~v~~~p~~ 610 (728)
+.||...-.. ...........|+...++ |+...+.-....+.|.|.||||..+..++.. .+. -+++++...|++
T Consensus 105 GtGfSy~~~~-~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~~ 183 (300)
T 4az3_A 105 GVGFSYSDDK-FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLS 183 (300)
T ss_dssp TSTTCEETTC-CCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCS
T ss_pred cccccccCCC-cccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCcc
Confidence 5544322110 000101112344444443 3444444456789999999999998877643 222 379999999998
Q ss_pred cchh
Q 004839 611 DATN 614 (728)
Q Consensus 611 d~~~ 614 (728)
|...
T Consensus 184 d~~~ 187 (300)
T 4az3_A 184 SYEQ 187 (300)
T ss_dssp BHHH
T ss_pred CHHH
Confidence 8653
No 488
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=95.30 E-value=0.65 Score=53.23 Aligned_cols=120 Identities=13% Similarity=0.087 Sum_probs=69.6
Q ss_pred eeeCCCCCE---EEEEEEcCCCcEEEEEEEECCC--CceeccCccceeeeEEEecCCCEEEEEEecC-----CCCcceeE
Q 004839 129 SEVSPDHKF---LAYTMYDKDNDYFTLSVRNLNS--GALCSKPQAVRVSNIAWAKDGQALIYVVTDQ-----NKRPYQIY 198 (728)
Q Consensus 129 ~~~SPDG~~---lA~~~~~~g~e~~~l~v~dl~t--g~~~~~~~~~~~~~~~WspDg~~l~y~~~~~-----~~~~~~v~ 198 (728)
...++|+++ +.+.....+.....+|++|++. ++..++..... ..+.++.+++.+++++.+- .-...+|+
T Consensus 245 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (711)
T 4hvt_A 245 AGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSD-ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLV 323 (711)
T ss_dssp EEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTT-CEEEEEETTEEEEECSSCEEETTEEECTTCEE
T ss_pred EEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCc-ceEeeeECCEEEEEECcccccccccCCCCeEE
Confidence 446888885 2333322233347799999874 55444433222 3356777775555443321 01345799
Q ss_pred EEECCCCC-------ceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 199 CSIIGSTD-------EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 199 ~~~l~t~~-------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
.+++.++. .-+.++.........++.++.| +|++.......++|+++|+.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~l~~~~~~~~~~~l~~~~~~~ 381 (711)
T 4hvt_A 324 ALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD--RVFLATYDNVVAKVVTFTLEN 381 (711)
T ss_dssp EEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS--CEEEEEEETTEEEEEEECEET
T ss_pred EEECCcccccccccccceEEECCCCCCeEEEEEEECC--EEEEEEEECCEEEEEEEECCC
Confidence 99987631 1122233333334456777765 577777777778999999876
No 489
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.28 E-value=3.5 Score=44.00 Aligned_cols=118 Identities=8% Similarity=0.002 Sum_probs=69.4
Q ss_pred eeceeeCCCCCEEEEEEEcCC-CcEEEEEEEECCCCce--eccCccceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 126 EELSEVSPDHKFLAYTMYDKD-NDYFTLSVRNLNSGAL--CSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g-~e~~~l~v~dl~tg~~--~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
...+.++|||++|.++ +..+ .....+++++.+++-. ..+........+++.|++..||++.. ...+|++++.
T Consensus 181 P~~ia~d~~G~~lyva-d~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~----~~~~V~~~~~ 255 (430)
T 3tc9_A 181 VRTICWTHEADSMIIT-NDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSW----NAGQVFRYDF 255 (430)
T ss_dssp EEEEEECTTSSEEEEE-ECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEET----TTTEEEEEET
T ss_pred cceEEEeCCCCEEEEE-eCCCCcccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEEC----CCCEEEEEEC
Confidence 4567899999977555 5433 2233466666554321 11111223467889995556877643 2458999998
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
.++... .+........-.++.++|||++|++.... ...|++++.+.
T Consensus 256 ~~~~~~-~~~~~~~~~~P~gia~~pdG~~lyv~d~~--~~~I~~~~~d~ 301 (430)
T 3tc9_A 256 TTQETT-PLFTIQDSGWEFHIQFHPSGNYAYIVVVN--QHYILRSDYDW 301 (430)
T ss_dssp TTTEEE-EEEECSSSSCCEEEEECTTSSEEEEEETT--TTEEEEEEEET
T ss_pred CCCcEE-EEEEcCCCCcceeEEEcCCCCEEEEEECC--CCEEEEEeCCc
Confidence 765321 22222222223467899999998887643 35688877653
No 490
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.25 E-value=2.9 Score=44.75 Aligned_cols=118 Identities=8% Similarity=-0.053 Sum_probs=67.1
Q ss_pred eeceeeCCCCCEEEEEEEcCCC-cEEEEEEEECCCCcee--ccCccceeeeEEEecCCCEEEEEEecCCCCcceeEEEEC
Q 004839 126 EELSEVSPDHKFLAYTMYDKDN-DYFTLSVRNLNSGALC--SKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 202 (728)
Q Consensus 126 ~~~~~~SPDG~~lA~~~~~~g~-e~~~l~v~dl~tg~~~--~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l 202 (728)
...+.++|||+ | |..+..+. ....++.++..++... .+........+++.|++..||++.. ...+|++++.
T Consensus 184 P~giavd~dG~-l-yVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~----~~~~V~~~d~ 257 (433)
T 4hw6_A 184 CADVNFTLNGD-M-VVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRY----HHAMISSYDP 257 (433)
T ss_dssp EEEEEECTTCC-E-EEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBT----TCSEEEEECT
T ss_pred ccEEEECCCCC-E-EEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEEC----CCCEEEEEEC
Confidence 55678999999 4 54454331 1233555554433211 1111223456889995556777632 2457999998
Q ss_pred CCCCceeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCC
Q 004839 203 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 251 (728)
Q Consensus 203 ~t~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~ 251 (728)
.++.....++.......-..+.++|||++|++.... ...|++++.+.
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~--~~~I~~~~~d~ 304 (433)
T 4hw6_A 258 ATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG--KHCIYRVDYNR 304 (433)
T ss_dssp TTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT--TTEEEEEEBCT
T ss_pred CCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC--CCEEEEEeCCC
Confidence 765431223322222222357899999998887653 35788888753
No 491
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.19 E-value=2.7 Score=41.44 Aligned_cols=191 Identities=9% Similarity=0.008 Sum_probs=94.0
Q ss_pred eeceee-CCCCCEEEEEEEcCCCcEEEEEEEECCCCceec-cCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEE
Q 004839 126 EELSEV-SPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS-KPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 201 (728)
Q Consensus 126 ~~~~~~-SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~-~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~ 201 (728)
...+.+ +++|+ |.++ +..++ ..|+++|. +|+.+. ... ......++++|||+ ||++.. ....|++++
T Consensus 79 p~~i~~~~~~g~-l~v~-~~~~~--~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~----~~~~i~~~~ 148 (286)
T 1q7f_A 79 PNRVAVVRNSGD-IIVT-ERSPT--HQIQIYNQ-YGQFVRKFGATILQHPRGVTVDNKGR-IIVVEC----KVMRVIIFD 148 (286)
T ss_dssp EEEEEEETTTTE-EEEE-ECGGG--CEEEEECT-TSCEEEEECTTTCSCEEEEEECTTSC-EEEEET----TTTEEEEEC
T ss_pred ceEEEEEcCCCe-EEEE-cCCCC--CEEEEECC-CCcEEEEecCccCCCceEEEEeCCCC-EEEEEC----CCCEEEEEc
Confidence 445567 46665 3333 33211 24888894 455433 211 23456789999997 655532 234788888
Q ss_pred CCCCCceeEEeee-cCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC--Cc-eEEEEeecCCEE
Q 004839 202 IGSTDEDALLLEE-SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE--GL-AHCIVEHHEGFL 277 (728)
Q Consensus 202 l~t~~~~~lv~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~--~~-~~~~~~~dg~~l 277 (728)
.... ....+.. .......++.+++||+ |++.... ...|+++|.++ .....+.... .. ....++++| .+
T Consensus 149 ~~g~--~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~--~~~i~~~~~~g--~~~~~~~~~g~~~~p~~i~~d~~G-~l 220 (286)
T 1q7f_A 149 QNGN--VLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR--AHCVKVFNYEG--QYLRQIGGEGITNYPIGVGINSNG-EI 220 (286)
T ss_dssp TTSC--EEEEEECTTTCSSEEEEEECSSSE-EEEEEGG--GTEEEEEETTC--CEEEEESCTTTSCSEEEEEECTTC-CE
T ss_pred CCCC--EEEEeCCCCccCCcEEEEECCCCC-EEEEECC--CCEEEEEcCCC--CEEEEEccCCccCCCcEEEECCCC-CE
Confidence 5432 1112221 1112235688999998 5554332 35788999754 2223332211 11 122345555 46
Q ss_pred EEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCCeeEEEEEec
Q 004839 278 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSL 348 (728)
Q Consensus 278 ~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g~~~l~~~~l 348 (728)
|+....+. ..|..++.+ ......+........+.++.+.. +.|++. ..++ .|.++++
T Consensus 221 ~v~~~~~~-------~~i~~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~--~v~v~~~ 278 (286)
T 1q7f_A 221 LIADNHNN-------FNLTIFTQD----GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDY--RLYIYRY 278 (286)
T ss_dssp EEEECSSS-------CEEEEECTT----SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTT--EEEEEEC
T ss_pred EEEeCCCC-------EEEEEECCC----CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCC--eEEEEEc
Confidence 65543321 246666543 11122222222223355666664 567766 3443 4555543
No 492
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.18 E-value=3.9 Score=43.25 Aligned_cols=186 Identities=6% Similarity=0.020 Sum_probs=98.6
Q ss_pred eeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCc
Q 004839 130 EVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE 207 (728)
Q Consensus 130 ~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~ 207 (728)
.+++||++|+... .+|. |+++|+.+++...... ...+..+.| |++.|+-...+ ..|...++.+++.
T Consensus 138 ~~~~d~~~l~~g~-~dg~----i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~d-----g~i~vwd~~~~~~ 205 (435)
T 1p22_A 138 CLQYDDQKIVSGL-RDNT----IKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSD-----STVRVWDVNTGEM 205 (435)
T ss_dssp EEECCSSEEEEEE-SSSC----EEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETT-----SCEEEEESSSCCE
T ss_pred EEEECCCEEEEEe-CCCe----EEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCC-----CeEEEEECCCCcE
Confidence 4667999998875 4554 9999999998655432 345666777 77766555322 3688888887652
Q ss_pred eeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCe-EEeeecCCceEEEEeecCCEEEEEEcCCcc
Q 004839 208 DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL-TLIWECEGLAHCIVEHHEGFLYLFTDAAKE 286 (728)
Q Consensus 208 ~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~-~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~ 286 (728)
. ..+.... .....+.++ +..|+..+.+ ..|.+.|+.++.... .............+..+++.++..+..+
T Consensus 206 ~-~~~~~h~-~~v~~l~~~--~~~l~s~s~d---g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg-- 276 (435)
T 1p22_A 206 L-NTLIHHC-EAVLHLRFN--NGMMVTCSKD---RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDR-- 276 (435)
T ss_dssp E-EEECCCC-SCEEEEECC--TTEEEEEETT---SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTS--
T ss_pred E-EEEcCCC-CcEEEEEEc--CCEEEEeeCC---CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCC--
Confidence 2 1222222 223455665 4555544433 357788887643211 1222222222334444677666554322
Q ss_pred CCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCCC
Q 004839 287 GQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 287 ~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
.|...++. . ......+.. ....+..+.+.++.++ +...+| .|.++|+.++
T Consensus 277 -------~i~vwd~~-~---~~~~~~~~~-~~~~v~~~~~~~~~l~-~g~~dg--~i~iwd~~~~ 326 (435)
T 1p22_A 277 -------TIKVWNTS-T---CEFVRTLNG-HKRGIACLQYRDRLVV-SGSSDN--TIRLWDIECG 326 (435)
T ss_dssp -------EEEEEETT-T---CCEEEEEEC-CSSCEEEEEEETTEEE-EEETTS--CEEEEETTTC
T ss_pred -------eEEEEECC-c---CcEEEEEcC-CCCcEEEEEeCCCEEE-EEeCCC--eEEEEECCCC
Confidence 24444544 1 112212222 2344666666665544 444454 4666776653
No 493
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=95.17 E-value=3.4 Score=42.52 Aligned_cols=119 Identities=13% Similarity=0.046 Sum_probs=59.3
Q ss_pred EeeceeeCCC----CCEEEEEEEcCCCcEEEEEEEECCCCceeccCc---cceeeeEEEecCCCEEE-------------
Q 004839 125 YEELSEVSPD----HKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALI------------- 184 (728)
Q Consensus 125 ~~~~~~~SPD----G~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~------------- 184 (728)
.+..+.+||| +++++-... ++.|+++.+|+.+.... ...+..+.++|||+.+.
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~-------~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~ 185 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGN-------IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILT 185 (356)
T ss_dssp EEEEECC------CCEEEEEEEE-------EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEE
T ss_pred ceEEEEECCCccccccEEEeCCC-------eEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEE
Confidence 5677889999 888877432 25556666655443211 22344555556555422
Q ss_pred EEEecC-------CCCcceeEEEECCCCCceeEEeeecC--cceEEEEEEcCCCCEEEEEEcC---------CCceEEEE
Q 004839 185 YVVTDQ-------NKRPYQIYCSIIGSTDEDALLLEESN--ENVYVNIRHTKDFHFVCVHTFS---------TTSSKVFL 246 (728)
Q Consensus 185 y~~~~~-------~~~~~~v~~~~l~t~~~~~lv~~~~~--~~~~~~~~~SpDg~~l~~~~~~---------~~~~~l~~ 246 (728)
|...+. ......|.+.|+.+++.-. .+...+ ......+.+||||+.++..+.+ .....+.+
T Consensus 186 fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~-tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 186 FAEVQGMQEALLGTTIMNNIVIWNLKTGQLLK-KMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp EEEEETSTTEEEEEETTSEEEEEETTTCCEEE-EEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred eeccCCCCceEEEecCCCcEEEEECCCCcEEE-EEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 111000 0123357778998876222 222211 1122356799999988654432 12345666
Q ss_pred EeCCC
Q 004839 247 INAAD 251 (728)
Q Consensus 247 ~dl~~ 251 (728)
.|..+
T Consensus 265 Wd~~t 269 (356)
T 2w18_A 265 INPKT 269 (356)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 77766
No 494
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.02 E-value=4.3 Score=42.91 Aligned_cols=182 Identities=8% Similarity=0.051 Sum_probs=95.7
Q ss_pred eCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCce
Q 004839 131 VSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDED 208 (728)
Q Consensus 131 ~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~~ 208 (728)
++.||++|+... .+|. |+++|+.+++...... ...+..+.|++ +.|+.. .. ...|...++.++...
T Consensus 179 l~~~~~~l~sg~-~dg~----i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~-s~----dg~i~vwd~~~~~~~ 246 (435)
T 1p22_A 179 LQYDERVIITGS-SDST----VRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTC-SK----DRSIAVWDMASPTDI 246 (435)
T ss_dssp EECCSSEEEEEE-TTSC----EEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEE-ET----TSCEEEEECSSSSCC
T ss_pred EEECCCEEEEEc-CCCe----EEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEe-eC----CCcEEEEeCCCCCCc
Confidence 344899887764 5554 9999999998654322 34567788864 344443 32 236788888776422
Q ss_pred e--EEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCCEEEEEEcCCcc
Q 004839 209 A--LLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKE 286 (728)
Q Consensus 209 ~--lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~ 286 (728)
. ........ ....+.+ ++++|+..+.+ ..|.+.|+.++ +..............+..+++.++..+. ++
T Consensus 247 ~~~~~~~~~~~-~v~~~~~--~~~~l~s~~~d---g~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~l~~g~~-dg- 316 (435)
T 1p22_A 247 TLRRVLVGHRA-AVNVVDF--DDKYIVSASGD---RTIKVWNTSTC--EFVRTLNGHKRGIACLQYRDRLVVSGSS-DN- 316 (435)
T ss_dssp EEEEEECCCSS-CEEEEEE--ETTEEEEEETT---SEEEEEETTTC--CEEEEEECCSSCEEEEEEETTEEEEEET-TS-
T ss_pred eeeeEecCCCC-cEEEEEe--CCCEEEEEeCC---CeEEEEECCcC--cEEEEEcCCCCcEEEEEeCCCEEEEEeC-CC-
Confidence 1 12222222 2233444 78888766553 46888999873 3332222222223334445665555443 22
Q ss_pred CCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecC
Q 004839 287 GQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLP 349 (728)
Q Consensus 287 ~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 349 (728)
.|...++. . ......+.. ....+..+.+.++. +++...+|. |.++++.
T Consensus 317 -------~i~iwd~~-~---~~~~~~~~~-h~~~v~~~~~~~~~-l~sg~~dg~--i~vwd~~ 364 (435)
T 1p22_A 317 -------TIRLWDIE-C---GACLRVLEG-HEELVRCIRFDNKR-IVSGAYDGK--IKVWDLV 364 (435)
T ss_dssp -------CEEEEETT-T---CCEEEEECC-CSSCEEEEECCSSE-EEEEETTSC--EEEEEHH
T ss_pred -------eEEEEECC-C---CCEEEEEeC-CcCcEEEEEecCCE-EEEEeCCCc--EEEEECC
Confidence 24444443 1 111112222 23456677764444 455555654 5555553
No 495
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.99 E-value=0.84 Score=46.28 Aligned_cols=162 Identities=12% Similarity=0.136 Sum_probs=83.4
Q ss_pred EeeceeeCCC--CCEEEEEEEcCCCcEEEEEEEECCCCcee--ccCc---cceeeeEEEecCC-----------------
Q 004839 125 YEELSEVSPD--HKFLAYTMYDKDNDYFTLSVRNLNSGALC--SKPQ---AVRVSNIAWAKDG----------------- 180 (728)
Q Consensus 125 ~~~~~~~SPD--G~~lA~~~~~~g~e~~~l~v~dl~tg~~~--~~~~---~~~~~~~~WspDg----------------- 180 (728)
.+..+.|||| |++||-.. .+|. |+++|+.++... .... ...+..+.|+|++
T Consensus 105 ~V~~v~~~p~~~g~~lasgs-~D~~----i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (316)
T 3bg1_A 105 SVNSVCWAPHDYGLILACGS-SDGA----ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYI 179 (316)
T ss_dssp CCCEEEECCTTTCSCEEEEC-SSSC----EEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCC
T ss_pred ceEEEEECCCCCCcEEEEEc-CCCC----EEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCcccc
Confidence 4677889998 77787653 4453 889999876422 1111 2356678999984
Q ss_pred CEEEEEEecCCCCcceeEEEECCCCCc--eeEEeeecCcceEEEEEEcCCC----CEEEEEEcCCCceEEEEEeCCCCC-
Q 004839 181 QALIYVVTDQNKRPYQIYCSIIGSTDE--DALLLEESNENVYVNIRHTKDF----HFVCVHTFSTTSSKVFLINAADPF- 253 (728)
Q Consensus 181 ~~l~y~~~~~~~~~~~v~~~~l~t~~~--~~lv~~~~~~~~~~~~~~SpDg----~~l~~~~~~~~~~~l~~~dl~~~~- 253 (728)
+.|+ +.. ....|.+.++.+... ....+.. .......+.|+|++ ++|+..+. + ..|.+.++.+..
T Consensus 180 ~~l~-sgs----~D~~v~lWd~~~~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~~~~las~s~-D--~~v~iw~~~~~~~ 250 (316)
T 3bg1_A 180 KRFA-SGG----CDNLIKLWKEEEDGQWKEEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQ-D--GRVFIWTCDDASS 250 (316)
T ss_dssp CBEE-CCB----TTSBCCEEEECTTSCEEEEECCBC-CSSCEEEEECCCCSSCSCCEEEEEET-T--CEEEEEECSSTTC
T ss_pred ceEE-Eec----CCCeEEEEEeCCCCccceeeeccc-CCCceEEEEecCCCCCCCceEEEEcC-C--CeEEEEEccCccc
Confidence 3232 211 122444555543321 1111222 22234578999997 55544333 2 346667765521
Q ss_pred C--CeEEeeecCCce-EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEE
Q 004839 254 S--GLTLIWECEGLA-HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESV 312 (728)
Q Consensus 254 ~--~~~~l~~~~~~~-~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l 312 (728)
. ..+.+......+ ...+++++..|+..+. ++ ..+|+..... +.|..+
T Consensus 251 ~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~-D~------~v~lw~~~~~-----g~~~~~ 300 (316)
T 3bg1_A 251 NTWSPKLLHKFNDVVWHVSWSITANILAVSGG-DN------KVTLWKESVD-----GQWVCI 300 (316)
T ss_dssp CCCBCCEEEECSSCEEEEEECTTTCCEEEEES-SS------CEEEEEECTT-----SCEEEE
T ss_pred cchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC-CC------eEEEEEECCC-----CcEEEe
Confidence 1 122333222222 2345677776654433 22 3567765543 456544
No 496
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.88 E-value=0.22 Score=55.17 Aligned_cols=140 Identities=7% Similarity=-0.017 Sum_probs=77.5
Q ss_pred EeeceeeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceec--cCc-cceeeeE--EEecCCCEEEEEEecCCCCcceeEE
Q 004839 125 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS--KPQ-AVRVSNI--AWAKDGQALIYVVTDQNKRPYQIYC 199 (728)
Q Consensus 125 ~~~~~~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~--~~~-~~~~~~~--~WspDg~~l~y~~~~~~~~~~~v~~ 199 (728)
.+..+.|||++ .||-. ..+| .|.++|+.+++... ... ...+..+ .|+|||..++.+...+ ..|.+
T Consensus 268 ~v~sv~~s~~~-~lasg-s~Dg----tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D----~tvkl 337 (524)
T 2j04_B 268 LITTFDFLSPT-TVVCG-FKNG----FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD----GYFYI 337 (524)
T ss_dssp CEEEEEESSSS-EEEEE-ETTS----EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT----SEEEE
T ss_pred CEEEEEecCCC-eEEEE-eCCC----EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC----CeEEE
Confidence 46678899875 56655 3455 49999999874321 111 3356666 6789984444554432 25777
Q ss_pred EECCCCCc-eeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceE-EEEeecCCEE
Q 004839 200 SIIGSTDE-DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFL 277 (728)
Q Consensus 200 ~~l~t~~~-~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~-~~~~~dg~~l 277 (728)
.|+.+++. ..+.-.... .....++|+||++.|+..+.. ..|.+.|+.++. ....+......+. ..++++|..|
T Consensus 338 WD~~~~~~~~~~~~~~~~-~~v~~v~fsp~~~~l~s~~~d---~tv~lwd~~~~~-~~~~l~gH~~~V~sva~Sp~g~~l 412 (524)
T 2j04_B 338 FNPKDIATTKTTVSRFRG-SNLVPVVYCPQIYSYIYSDGA---SSLRAVPSRAAF-AVHPLVSRETTITAIGVSRLHPMV 412 (524)
T ss_dssp ECGGGHHHHCEEEEECSC-CSCCCEEEETTTTEEEEECSS---SEEEEEETTCTT-CCEEEEECSSCEEEEECCSSCCBC
T ss_pred EECCCCCccccccccccc-CcccceEeCCCcCeEEEeCCC---CcEEEEECcccc-cceeeecCCCceEEEEeCCCCCeE
Confidence 78765431 122111111 112247899999986543332 357888887642 2344444333332 3456777654
Q ss_pred EE
Q 004839 278 YL 279 (728)
Q Consensus 278 ~~ 279 (728)
+-
T Consensus 413 ~S 414 (524)
T 2j04_B 413 LA 414 (524)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 497
>1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A*
Probab=94.86 E-value=0.16 Score=54.23 Aligned_cols=133 Identities=13% Similarity=0.019 Sum_probs=75.2
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCccc---------HHH------HHHHHHCCeEEEEEcCCCCCCCC
Q 004839 476 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRW---------RSE------LKSLLDRGWVVAFADVRGGGGGG 540 (728)
Q Consensus 476 dG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~---------~~~------~~~l~~~Gy~v~~~d~RG~g~~G 540 (728)
.|..+-.|++..+. .....|++++++||||.+..... ... ...|. +-..++.+|.+-+.|+.
T Consensus 26 ~~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~-~~an~lfiDqPvGtGfS 102 (421)
T 1cpy_A 26 EDKHFFFWTFESRN--DPAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWN-SNATVIFLDQPVNVGFS 102 (421)
T ss_dssp TTEEEEEEEECCSS--CTTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGG-GGSEEECCCCSTTSTTC
T ss_pred CCcEEEEEEEEeCC--CCCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccc-cccCEEEecCCCccccc
Confidence 46677776665443 23457999999999996532110 000 00111 12467788854333332
Q ss_pred CccccccccCCCCCcHHHHHHHHHHHH-HcCCCCC--CcEEEEEeCccHHHHHHHHHh---CC---CceeEEEEeCCccc
Q 004839 541 KKWHHDGRRTKKLNSIKDFISCARFLI-EKEIVKE--HKLAGWGYSAGGLLVAAAINC---CP---DLFRAVVLEVPFLD 611 (728)
Q Consensus 541 ~~~~~~~~~~~~~~~~~D~~~~~~~l~-~~~~~d~--~ri~i~G~S~GG~~~~~~~~~---~p---~~f~a~v~~~p~~d 611 (728)
.. .............|+...++... +.+.... .++.|.|.||||..+..++.. +. =-+++++...|++|
T Consensus 103 y~--~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~~d 180 (421)
T 1cpy_A 103 YS--GSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp EE--SSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCCCC
T ss_pred CC--CCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCcccC
Confidence 21 11101111123456666555443 4444455 789999999999998777642 11 13689999899887
Q ss_pred ch
Q 004839 612 AT 613 (728)
Q Consensus 612 ~~ 613 (728)
..
T Consensus 181 p~ 182 (421)
T 1cpy_A 181 PL 182 (421)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 498
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.69 E-value=1.8 Score=47.60 Aligned_cols=193 Identities=6% Similarity=-0.048 Sum_probs=99.7
Q ss_pred EeeceeeCCC------CCEEEEEEEcCCCcEEEEEEEECCCCcee-----c-------cCc-cceeeeEEEecCCCEEEE
Q 004839 125 YEELSEVSPD------HKFLAYTMYDKDNDYFTLSVRNLNSGALC-----S-------KPQ-AVRVSNIAWAKDGQALIY 185 (728)
Q Consensus 125 ~~~~~~~SPD------G~~lA~~~~~~g~e~~~l~v~dl~tg~~~-----~-------~~~-~~~~~~~~WspDg~~l~y 185 (728)
.+..++|||+ |++||-.. .+|. |.|+|+.+++.. . +.. ...+..++|++++ .|+-
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s-~Dgt----vrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~las 282 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVS-QEGT----INFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVC 282 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEE-TTSC----EEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEE
T ss_pred cEEEEEECCCCCCCCCCceEEEEe-cCCe----EEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEE
Confidence 3567889997 57887664 4554 999999887522 0 111 2457789999875 4544
Q ss_pred EEecCCCCcceeEEEECCCCCceeEEeeecCcceEEEE--EEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecC
Q 004839 186 VVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNI--RHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE 263 (728)
Q Consensus 186 ~~~~~~~~~~~v~~~~l~t~~~~~lv~~~~~~~~~~~~--~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~ 263 (728)
. .. ...|.+.|+.++......+..... ...++ .++++|..++++...+ ..|.+.|+.++. ....+....
T Consensus 283 g-s~----DgtV~lWD~~~~~~~~~~~~~H~~-~V~sv~~~~s~~g~~~laS~S~D--~tvklWD~~~~~-~~~~~~~~~ 353 (524)
T 2j04_B 283 G-FK----NGFVAEFDLTDPEVPSFYDQVHDS-YILSVSTAYSDFEDTVVSTVAVD--GYFYIFNPKDIA-TTKTTVSRF 353 (524)
T ss_dssp E-ET----TSEEEEEETTBCSSCSEEEECSSS-CEEEEEEECCTTSCCEEEEEETT--SEEEEECGGGHH-HHCEEEEEC
T ss_pred E-eC----CCEEEEEECCCCCCceEEeecccc-cEEEEEEEcCCCCCeEEEEeccC--CeEEEEECCCCC-ccccccccc
Confidence 4 32 236888898765322222322222 23344 5789983344444433 357777876522 122222221
Q ss_pred C--ce-EEEEeecCCEEEEEEcCCccCCCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeC-CEEEEEEecCC
Q 004839 264 G--LA-HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGR 339 (728)
Q Consensus 264 ~--~~-~~~~~~dg~~l~~~tn~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~-~~lv~~~~~~g 339 (728)
. .+ ...+++++..|+. +..++ ..+|+ ++. . ......+..+ ...+..+.+.. +.+++....+|
T Consensus 354 ~~~~v~~v~fsp~~~~l~s-~~~d~------tv~lw--d~~-~--~~~~~~l~gH--~~~V~sva~Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 354 RGSNLVPVVYCPQIYSYIY-SDGAS------SLRAV--PSR-A--AFAVHPLVSR--ETTITAIGVSRLHPMVLAGSADG 419 (524)
T ss_dssp SCCSCCCEEEETTTTEEEE-ECSSS------EEEEE--ETT-C--TTCCEEEEEC--SSCEEEEECCSSCCBCEEEETTT
T ss_pred ccCcccceEeCCCcCeEEE-eCCCC------cEEEE--ECc-c--cccceeeecC--CCceEEEEeCCCCCeEEEEECCC
Confidence 1 11 2355677776443 33321 23444 443 1 1112333332 33466666664 34555666666
Q ss_pred eeEEEEEec
Q 004839 340 TYRLCSVSL 348 (728)
Q Consensus 340 ~~~l~~~~l 348 (728)
. +.++++
T Consensus 420 t--v~lwd~ 426 (524)
T 2j04_B 420 S--LIITNA 426 (524)
T ss_dssp E--EECCBS
T ss_pred E--EEEEec
Confidence 4 444443
No 499
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.69 E-value=5.3 Score=42.30 Aligned_cols=184 Identities=8% Similarity=-0.120 Sum_probs=96.2
Q ss_pred eeCCCCCEEEEEEEcCCCcEEEEEEEECCCCceeccCc--cceeeeEEEecCCCEEEEEEecCCCCcceeEEEECCCCCc
Q 004839 130 EVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE 207 (728)
Q Consensus 130 ~~SPDG~~lA~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~v~~~~l~t~~~ 207 (728)
.+++||++|+... .+|. |+++|+.+++.+.... ...+..+.|+ ++.|+.... ...|...++.+++.
T Consensus 124 ~~~~~g~~l~sg~-~dg~----i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~-----dg~i~vwd~~~~~~ 191 (445)
T 2ovr_B 124 CLQFCGNRIVSGS-DDNT----LKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGST-----DRTLKVWNAETGEC 191 (445)
T ss_dssp EEEEETTEEEEEE-TTSC----EEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEET-----TSCEEEEETTTTEE
T ss_pred EEEEcCCEEEEEE-CCCc----EEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeC-----CCeEEEEECCcCcE
Confidence 3678899988764 4554 9999999998665332 3456777887 445544432 23688888877642
Q ss_pred eeEEeeecCcceEEEEEEcCCCCEEEEEEcCCCceEEEEEeCCCCCCCeEEeeecCCceEEEEeecCCEEEEEEcCCccC
Q 004839 208 DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKEG 287 (728)
Q Consensus 208 ~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~dl~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~tn~~~~~ 287 (728)
. ..+..... ....+.+ +++.|+..+.+ ..|.+.|+.++ +..............+..+++.++..+. ++
T Consensus 192 ~-~~~~~h~~-~v~~~~~--~~~~l~s~s~d---g~i~~wd~~~~--~~~~~~~~~~~~v~~~~~~~~~l~~~~~-dg-- 259 (445)
T 2ovr_B 192 I-HTLYGHTS-TVRCMHL--HEKRVVSGSRD---ATLRVWDIETG--QCLHVLMGHVAAVRCVQYDGRRVVSGAY-DF-- 259 (445)
T ss_dssp E-EEECCCSS-CEEEEEE--ETTEEEEEETT---SEEEEEESSSC--CEEEEEECCSSCEEEEEECSSCEEEEET-TS--
T ss_pred E-EEECCCCC-cEEEEEe--cCCEEEEEeCC---CEEEEEECCCC--cEEEEEcCCcccEEEEEECCCEEEEEcC-CC--
Confidence 2 22222222 2233444 46666555443 46888898773 3332222222222334446665555443 22
Q ss_pred CCCCceEEEEeeCCCCCCCCCCeEEeecCCCceEEEEEeeCCEEEEEEecCCeeEEEEEecCCC
Q 004839 288 QEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 351 (728)
Q Consensus 288 ~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~i~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 351 (728)
..+++ ++. . ......+. .....+..+.+.++.++ +...+| .+.++++.++
T Consensus 260 ----~i~iw--d~~-~---~~~~~~~~-~~~~~v~~~~~~~~~l~-~~~~d~--~i~i~d~~~~ 309 (445)
T 2ovr_B 260 ----MVKVW--DPE-T---ETCLHTLQ-GHTNRVYSLQFDGIHVV-SGSLDT--SIRVWDVETG 309 (445)
T ss_dssp ----CEEEE--EGG-G---TEEEEEEC-CCSSCEEEEEECSSEEE-EEETTS--CEEEEETTTC
T ss_pred ----EEEEE--ECC-C---CcEeEEec-CCCCceEEEEECCCEEE-EEeCCC--eEEEEECCCC
Confidence 23344 433 1 11111111 12334666666555544 444454 3666776553
No 500
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A*
Probab=94.64 E-value=0.058 Score=54.08 Aligned_cols=110 Identities=14% Similarity=0.027 Sum_probs=64.0
Q ss_pred cEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCcCcccHHHHHHHHHCCeEEEE-EcCCCCCCCCCccccccccCCCCCcH
Q 004839 478 ISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAF-ADVRGGGGGGKKWHHDGRRTKKLNSI 556 (728)
Q Consensus 478 ~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~l~~~Gy~v~~-~d~RG~g~~G~~~~~~~~~~~~~~~~ 556 (728)
..+.+++..+.. +.-+||.+||-.. ....+.+.++.+.. .+.++.+. - ..|....-....
T Consensus 61 ~~~~~~v~~~~~-----~~~iVva~RGT~~---------~~d~l~d~~~~~~~~~~~~~~~~----v-h~Gf~~~~~~~~ 121 (269)
T 1tib_A 61 GDVTGFLALDNT-----NKLIVLSFRGSRS---------IENWIGNLNFDLKEINDICSGCR----G-HDGFTSSWRSVA 121 (269)
T ss_dssp TTEEEEEEEETT-----TTEEEEEECCCSC---------THHHHTCCCCCEEECTTTSTTCE----E-EHHHHHHHHHHH
T ss_pred cCcEEEEEEECC-----CCEEEEEEeCCCC---------HHHHHHhcCeeeeecCCCCCCCE----e-cHHHHHHHHHHH
Confidence 356777776642 2357888898632 24567788888776 45554211 0 011111001134
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeCccHHHHHHHHHhCCC---ceeEEEEeCC
Q 004839 557 KDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPD---LFRAVVLEVP 608 (728)
Q Consensus 557 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~~~~~~~~~~p~---~f~a~v~~~p 608 (728)
+|+...++.+.++.. ..+|.+.|||+||.++..++..... .+++....+|
T Consensus 122 ~~~~~~~~~~~~~~~--~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P 174 (269)
T 1tib_A 122 DTLRQKVEDAVREHP--DYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAP 174 (269)
T ss_dssp HHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCC
T ss_pred HHHHHHHHHHHHHCC--CceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 566666666665421 2489999999999999998876432 2444444444
Done!