Your job contains 1 sequence.
>004841
MTMNERKTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAFVN
ILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGL
TCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFE
TAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQH
ELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGT
ALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEA
FEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFA
EFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEE
YLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTW
IYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLH
SLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPVDEKKKVIEDVDKDRR
YAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSN
PNMFRYLA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004841
(728 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132377 - symbol:CUL1 "cullin 1" species:3702 ... 3002 5.7e-313 1
TAIR|locus:2024755 - symbol:CUL2 "cullin 2" species:3702 ... 2331 3.0e-249 2
TAIR|locus:2018645 - symbol:AT1G43140 species:3702 "Arabi... 1419 8.4e-243 2
TAIR|locus:2205020 - symbol:CUL3B "AT1G69670" species:370... 708 2.1e-113 2
UNIPROTKB|F1RN43 - symbol:CUL4A "Uncharacterized protein"... 761 2.2e-103 2
FB|FBgn0261268 - symbol:Cul-3 "Cullin-3" species:7227 "Dr... 723 9.7e-99 2
TAIR|locus:2025881 - symbol:AT1G59790 species:3702 "Arabi... 929 2.7e-93 1
TAIR|locus:2162060 - symbol:CUL4 "cullin4" species:3702 "... 741 1.6e-92 2
UNIPROTKB|F1MYD0 - symbol:CUL1 "Uncharacterized protein" ... 882 3.8e-91 2
UNIPROTKB|E2R1V2 - symbol:CUL1 "Uncharacterized protein" ... 882 3.8e-91 2
UNIPROTKB|Q13616 - symbol:CUL1 "Cullin-1" species:9606 "H... 882 3.8e-91 2
UNIPROTKB|Q5R4G6 - symbol:CUL1 "Cullin-1" species:9601 "P... 882 3.8e-91 2
MGI|MGI:1349658 - symbol:Cul1 "cullin 1" species:10090 "M... 882 3.8e-91 2
RGD|1308157 - symbol:Cul1 "cullin 1" species:10116 "Rattu... 882 3.8e-91 2
DICTYBASE|DDB_G0291972 - symbol:culA "cullin A" species:4... 870 3.4e-90 2
ZFIN|ZDB-GENE-030131-2603 - symbol:cul1a "cullin 1a" spec... 872 4.4e-90 2
ZFIN|ZDB-GENE-040426-2887 - symbol:cul1b "cullin 1b" spec... 866 9.0e-90 2
UNIPROTKB|F1SAD7 - symbol:CUL1 "Uncharacterized protein" ... 868 1.2e-89 2
ASPGD|ASPL0000060435 - symbol:culA species:162425 "Emeric... 828 3.9e-87 2
UNIPROTKB|E1C0W8 - symbol:CUL1 "Uncharacterized protein" ... 826 3.1e-85 2
WB|WBGene00000838 - symbol:cul-3 species:6239 "Caenorhabd... 629 8.2e-85 2
UNIPROTKB|Q17391 - symbol:cul-3 "Cullin-3" species:6239 "... 629 8.2e-85 2
WB|WBGene00000836 - symbol:cul-1 species:6239 "Caenorhabd... 809 1.2e-83 2
POMBASE|SPAC24H6.03 - symbol:cul3 "cullin 3" species:4896... 835 2.4e-83 1
UNIPROTKB|G3N0Q3 - symbol:G3N0Q3 "Uncharacterized protein... 825 2.8e-82 1
UNIPROTKB|E1BFD5 - symbol:CUL4B "Uncharacterized protein"... 784 7.4e-80 2
FB|FBgn0015509 - symbol:lin19 "lin-19-like" species:7227 ... 802 7.6e-80 1
DICTYBASE|DDB_G0284903 - symbol:culC "cullin C" species:4... 602 1.7e-78 2
UNIPROTKB|F1P2U1 - symbol:CUL4A "Uncharacterized protein"... 789 1.8e-78 1
UNIPROTKB|Q5T2B7 - symbol:CUL2 "Cullin-2" species:9606 "H... 768 2.8e-78 2
MGI|MGI:1919834 - symbol:Cul4b "cullin 4B" species:10090 ... 785 4.8e-78 1
UNIPROTKB|E2RMN1 - symbol:CUL4B "Uncharacterized protein"... 784 6.2e-78 1
UNIPROTKB|K4DI93 - symbol:CUL4B "Cullin 4B, isoform CRA_e... 784 6.2e-78 1
UNIPROTKB|Q13620 - symbol:CUL4B "Cullin-4B" species:9606 ... 784 6.2e-78 1
FB|FBgn0033260 - symbol:Cul-4 "Cullin-4" species:7227 "Dr... 782 1.0e-77 1
UNIPROTKB|E1BQK9 - symbol:CUL4B "Uncharacterized protein"... 776 4.3e-77 1
UNIPROTKB|Q13617 - symbol:CUL2 "Cullin-2" species:9606 "H... 772 1.1e-76 1
DICTYBASE|DDB_G0267384 - symbol:culB "cullin B" species:4... 640 1.4e-76 2
UNIPROTKB|Q08DE9 - symbol:CUL2 "Uncharacterized protein" ... 771 1.5e-76 1
UNIPROTKB|E2QRU7 - symbol:CUL2 "Uncharacterized protein" ... 771 1.5e-76 1
UNIPROTKB|F1Q284 - symbol:CUL4A "Uncharacterized protein"... 769 2.4e-76 1
UNIPROTKB|D4A0H4 - symbol:Cul2 "Cullin 2 (Predicted), iso... 549 2.9e-76 2
UNIPROTKB|Q13619 - symbol:CUL4A "Cullin-4A" species:9606 ... 766 5.0e-76 1
UNIPROTKB|F1N3S4 - symbol:CUL4A "Uncharacterized protein"... 766 5.0e-76 1
MGI|MGI:1914487 - symbol:Cul4a "cullin 4A" species:10090 ... 763 1.0e-75 1
ZFIN|ZDB-GENE-041008-208 - symbol:cul4b "cullin 4B" speci... 761 1.7e-75 1
MGI|MGI:1918995 - symbol:Cul2 "cullin 2" species:10090 "M... 759 2.7e-75 1
ZFIN|ZDB-GENE-030131-8032 - symbol:cul2 "cullin 2" specie... 740 3.2e-75 2
UNIPROTKB|F1N829 - symbol:CUL2 "Uncharacterized protein" ... 754 9.3e-75 1
POMBASE|SPAC17G6.12 - symbol:cul1 "cullin 1" species:4896... 720 2.3e-74 2
ASPGD|ASPL0000052453 - symbol:culD species:162425 "Emeric... 745 8.4e-74 1
TAIR|locus:2200670 - symbol:CUL3 "AT1G26830" species:3702... 731 2.5e-72 1
UNIPROTKB|Q5T2B5 - symbol:CUL2 "Cullin-2" species:9606 "H... 656 2.3e-70 2
RGD|1310644 - symbol:Cul2 "cullin 2" species:10116 "Rattu... 646 2.6e-69 2
RGD|1564494 - symbol:Cul4b "cullin 4B" species:10116 "Rat... 472 3.6e-69 2
UNIPROTKB|I3L5M8 - symbol:LOC100739075 "Uncharacterized p... 664 3.2e-65 1
FB|FBgn0032956 - symbol:Cul-2 "Cullin-2" species:7227 "Dr... 658 1.4e-64 1
UNIPROTKB|F1RUR7 - symbol:CUL2 "Uncharacterized protein" ... 658 1.4e-64 1
DICTYBASE|DDB_G0278991 - symbol:culE "cullin E" species:4... 649 1.2e-63 1
POMBASE|SPAC3A11.08 - symbol:pcu4 "cullin 4" species:4896... 561 1.4e-62 2
UNIPROTKB|F1SR61 - symbol:LOC100511787 "Uncharacterized p... 401 4.8e-62 2
WB|WBGene00000841 - symbol:cul-6 species:6239 "Caenorhabd... 624 5.5e-61 1
TAIR|locus:2025941 - symbol:AT1G59800 species:3702 "Arabi... 618 2.4e-60 1
UNIPROTKB|Q6DE95 - symbol:cul3a "Cullin-3-A" species:8355... 404 6.2e-60 3
UNIPROTKB|E1BYQ3 - symbol:CUL3 "Uncharacterized protein" ... 405 1.1e-59 3
UNIPROTKB|F1PU58 - symbol:CUL3 "Uncharacterized protein" ... 405 1.2e-59 3
RGD|1308190 - symbol:Cul3 "cullin 3" species:10116 "Rattu... 405 1.2e-59 3
ZFIN|ZDB-GENE-030131-3376 - symbol:cul3a "cullin 3a" spec... 405 1.3e-59 2
UNIPROTKB|Q6GPF3 - symbol:cul3b "Cullin-3-B" species:8355... 405 1.4e-59 2
UNIPROTKB|E1BIN5 - symbol:CUL3 "Uncharacterized protein" ... 405 1.5e-59 3
UNIPROTKB|A4IHP4 - symbol:cul3 "Cullin-3" species:8364 "X... 404 1.6e-59 3
MGI|MGI:1347360 - symbol:Cul3 "cullin 3" species:10090 "M... 402 2.8e-59 3
ASPGD|ASPL0000014731 - symbol:culC species:162425 "Emeric... 411 4.7e-59 2
UNIPROTKB|Q13618 - symbol:CUL3 "Cullin-3" species:9606 "H... 401 4.7e-59 3
ZFIN|ZDB-GENE-081007-1 - symbol:cul3b "cullin 3b" species... 405 6.3e-59 3
UNIPROTKB|F1P2W9 - symbol:CUL2 "Uncharacterized protein" ... 601 1.5e-58 1
CGD|CAL0000107 - symbol:CDC53 species:5476 "Candida albic... 568 3.8e-58 2
UNIPROTKB|Q5AJB7 - symbol:CDC53 "Putative uncharacterized... 568 3.8e-58 2
WB|WBGene00000837 - symbol:cul-2 species:6239 "Caenorhabd... 425 2.6e-57 3
UNIPROTKB|Q17390 - symbol:cul-2 "Cullin-2" species:6239 "... 425 2.6e-57 3
RGD|621742 - symbol:Cul5 "cullin 5" species:10116 "Rattus... 486 6.6e-57 3
UNIPROTKB|Q9JJ31 - symbol:Cul5 "Cullin-5" species:10116 "... 486 6.6e-57 3
ZFIN|ZDB-GENE-040426-1357 - symbol:cul4a "cullin 4A" spec... 585 7.5e-57 1
MGI|MGI:1922967 - symbol:Cul5 "cullin 5" species:10090 "M... 488 1.1e-56 3
UNIPROTKB|G4N0J9 - symbol:MGG_07731 "Cullin-3" species:24... 362 1.7e-56 3
WB|WBGene00000839 - symbol:cul-4 species:6239 "Caenorhabd... 561 1.0e-55 2
UNIPROTKB|F1N7B5 - symbol:CUL5 "Uncharacterized protein" ... 491 7.1e-55 2
UNIPROTKB|J9PAX0 - symbol:CUL5 "Uncharacterized protein" ... 491 7.1e-55 2
UNIPROTKB|Q93034 - symbol:CUL5 "Cullin-5" species:9606 "H... 491 1.1e-54 2
UNIPROTKB|I3LFR2 - symbol:CUL5 "Uncharacterized protein" ... 491 1.1e-54 2
UNIPROTKB|F1P0F9 - symbol:CUL5 "Uncharacterized protein" ... 492 1.2e-54 2
DICTYBASE|DDB_G0292794 - symbol:culD "cullin D" species:4... 418 4.7e-54 2
UNIPROTKB|K7GPT4 - symbol:LOC100739075 "Uncharacterized p... 538 7.2e-52 1
WB|WBGene00000840 - symbol:cul-5 species:6239 "Caenorhabd... 478 3.0e-51 2
ZFIN|ZDB-GENE-030131-5426 - symbol:cul5a "cullin 5a" spec... 462 1.8e-50 2
FB|FBgn0039632 - symbol:Cul-5 "Cullin-5" species:7227 "Dr... 515 1.4e-47 1
SGD|S000002290 - symbol:CDC53 "Cullin" species:4932 "Sacc... 379 1.4e-39 3
CGD|CAL0005748 - symbol:orf19.7497 species:5476 "Candida ... 194 1.3e-38 3
ZFIN|ZDB-GENE-091113-45 - symbol:cul5b "cullin 5b" specie... 345 1.0e-36 2
SGD|S000003235 - symbol:CUL3 "Ubiquitin-protein ligase" s... 404 1.1e-34 1
WARNING: Descriptions of 27 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2132377 [details] [associations]
symbol:CUL1 "cullin 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005819 "spindle"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IMP]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=TAS] [GO:0010265 "SCF complex assembly" evidence=IPI]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048316
"seed development" evidence=RCA] [GO:0048366 "leaf development"
evidence=IMP;RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0009873 GO:GO:0005819 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042752 GO:GO:0009793 GO:GO:0016567 GO:GO:0007049
GO:GO:0000794 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0000151 GO:GO:0009524 GO:GO:0009867
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002330 EMBL:AL161494
KO:K03347 HOGENOM:HOG000176712 EMBL:AJ318017 EMBL:AY046030
EMBL:AY133878 EMBL:AK222216 IPI:IPI00524614 PIR:T01092
RefSeq:NP_001031575.1 RefSeq:NP_001031576.1 RefSeq:NP_001190661.1
RefSeq:NP_567243.1 UniGene:At.24877 UniGene:At.67849
ProteinModelPortal:Q94AH6 SMR:Q94AH6 IntAct:Q94AH6 STRING:Q94AH6
PaxDb:Q94AH6 PRIDE:Q94AH6 EnsemblPlants:AT4G02570.1
EnsemblPlants:AT4G02570.2 EnsemblPlants:AT4G02570.3
EnsemblPlants:AT4G02570.4 GeneID:825648 KEGG:ath:AT4G02570
TAIR:At4g02570 InParanoid:Q94AH6 OMA:LDEGHEN PhylomeDB:Q94AH6
ProtClustDB:CLSN2689296 Genevestigator:Q94AH6 GermOnline:AT4G02570
GO:GO:0010265 Uniprot:Q94AH6
Length = 738
Score = 3002 (1061.8 bits), Expect = 5.7e-313, P = 5.7e-313
Identities = 581/740 (78%), Positives = 647/740 (87%)
Query: 5 ERKTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLFQ------PHLVS-- 56
ERKTIDLEQGW++MQ GITKLK ILEGL EP F SE YMMLYT ++ PH S
Sbjct: 2 ERKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQQ 61
Query: 57 -------AFVNIL-LLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIA 108
AF + VLP++REKHDEFMLREL KRWSNHKVMVRWLSRFF+YLDRYFIA
Sbjct: 62 LYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYFIA 121
Query: 109 RRSLPPLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIG 168
RRSLPPLNEVGLTCFRDLVY EL+ KV+ AVI L+D+EREGEQIDRALLKNVLDI+VEIG
Sbjct: 122 RRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIG 181
Query: 169 MGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHS 228
MGQM+ YE DFE+ ML+DT++YYSRKAS+WI EDSCPDYMLK+EECLK+E++RV+HYLHS
Sbjct: 182 MGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHS 241
Query: 229 SSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVS 288
SSEPKL+EKVQHELL V+A+QLLEKEHSGC ALLRDDKV+DLSRM+RL+ KI RGL+PV+
Sbjct: 242 SSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVA 301
Query: 289 NIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQ 348
NIFKQHVTAEG ALV+ AED A+N+ A V QEQV +RKVIELHDKY+ YV +CFQ
Sbjct: 302 NIFKQHVTAEGNALVQQAEDTATNQVANTASV---QEQVLIRKVIELHDKYMVYVTECFQ 358
Query: 349 NHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVK 408
NHTLFHK+LKEAFE+FCNK VAGSSSAELLATFCDNILKKGGSEKLSDEAIE+ LEKVVK
Sbjct: 359 NHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVK 418
Query: 409 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 468
LLAYISDKDLFAEFYRKKLARRLLFD+SANDDHERSILTKLKQQCGGQFTSKMEGMVTDL
Sbjct: 419 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 478
Query: 469 TLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREF 528
TLARENQ SFE+YL +NP ANPGIDLTVTVLTTGFWPSYKSFD+NLP+EM+KCVEVF+ F
Sbjct: 479 TLARENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSYKSFDINLPSEMIKCVEVFKGF 538
Query: 529 YQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQL 588
Y+TKTKHRKLTWIYSLGTC++ GKF+ + ELIV+TYQA+ LLLFN++D+LSY+EI+ QL
Sbjct: 539 YETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQL 598
Query: 589 NLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXX 648
NLS +D+VRLLHSLSCAKYKIL KEPNTKT+S D FEFNSKFTD+MRRIKIPLPP
Sbjct: 599 NLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPLPPVDER 658
Query: 649 XXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDL 708
RRYAIDA+IVRIMKSRKVLGHQQLV ECVEQL RMFKPD KAIKKR+EDL
Sbjct: 659 KKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 718
Query: 709 ITRDYLERDKSNPNMFRYLA 728
ITRDYLERDK NPNMFRYLA
Sbjct: 719 ITRDYLERDKENPNMFRYLA 738
>TAIR|locus:2024755 [details] [associations]
symbol:CUL2 "cullin 2" species:3702 "Arabidopsis
thaliana" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0019005
eggNOG:COG5647 SUPFAM:SSF75632 EMBL:AC009525 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 HOGENOM:HOG000176712
ProtClustDB:CLSN2689296 EMBL:AK117909 EMBL:BT006231 IPI:IPI00541917
PIR:D86160 RefSeq:NP_171797.2 UniGene:At.42569 HSSP:Q9JLV5
ProteinModelPortal:Q9SRZ0 SMR:Q9SRZ0 STRING:Q9SRZ0 PaxDb:Q9SRZ0
PRIDE:Q9SRZ0 EnsemblPlants:AT1G02980.1 GeneID:839415
KEGG:ath:AT1G02980 TAIR:At1g02980 InParanoid:Q9SRZ0 OMA:NDYHERS
PhylomeDB:Q9SRZ0 Genevestigator:Q9SRZ0 Uniprot:Q9SRZ0
Length = 742
Score = 2331 (825.6 bits), Expect = 3.0e-249, Sum P(2) = 3.0e-249
Identities = 440/665 (66%), Positives = 542/665 (81%)
Query: 65 VLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFR 124
VLP+IREKH E+MLRELVKRW+N K++VRWLS FF YLDR++ R S P L+ VG FR
Sbjct: 79 VLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDRFYTRRGSHPTLSAVGFISFR 138
Query: 125 DLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAML 184
DLVY EL K +DAV+ LI +EREGEQIDRALLKNV+D++ GMG++ YE DFE+ +L
Sbjct: 139 DLVYQELQSKAKDAVLALIHKEREGEQIDRALLKNVIDVYCGNGMGELVKYEEDFESFLL 198
Query: 185 KDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLS 244
+D+A+YYSR AS W E+SCPDYM+KAEE L+ EK+RV++YLHS++EPKL+ KVQ+ELL
Sbjct: 199 EDSASYYSRNASRWNQENSCPDYMIKAEESLRLEKERVTNYLHSTTEPKLVAKVQNELLV 258
Query: 245 VYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVK 304
V A QL+E EHSGC ALLRDDK++DL+RM+RL+ IP+GLDPV+++FKQH+T EG+AL+K
Sbjct: 259 VVAKQLIENEHSGCRALLRDDKMDDLARMYRLYHPIPQGLDPVADLFKQHITVEGSALIK 318
Query: 305 LAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVF 364
A +AA++K A + +Q+QV +R++I+LHDK++ YV++CFQ H+LFHK+LKEAFEVF
Sbjct: 319 QATEAATDKAASTSGLK-VQDQVLIRQLIDLHDKFMVYVDECFQKHSLFHKALKEAFEVF 377
Query: 365 CNKGVAGSSSAELLATFCDNILKKGGS-EKLSDEAIEEMLEKVVKLLAYISDKDLFAEFY 423
CNK VAG SSAE+LAT+CDNILK GG EKL +E +E LEKVVKLL YISDKDLFAEF+
Sbjct: 378 CNKTVAGVSSAEILATYCDNILKTGGGIEKLENEDLELTLEKVVKLLVYISDKDLFAEFF 437
Query: 424 RKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLS 483
RKK ARRLLFD++ ND HERS+LTK K+ G QFTSKMEGM+TD+TLA+E+QT+F E+LS
Sbjct: 438 RKKQARRLLFDRNGNDYHERSLLTKFKELLGAQFTSKMEGMLTDMTLAKEHQTNFVEFLS 497
Query: 484 NNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYS 543
N G+D TVTVLTTGFWPSYK+ DLNLP EMV CVE F+ +Y TKT R+L+WIYS
Sbjct: 498 VNKTKKLGMDFTVTVLTTGFWPSYKTTDLNLPIEMVNCVEAFKAYYGTKTNSRRLSWIYS 557
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
LGTC L GKF+ +T E++VTTYQA+ LLLFN+++RLSY+EI+ QLNL +D+ RLLHSLS
Sbjct: 558 LGTCQLAGKFDKKTIEIVVTTYQAAVLLLFNNTERLSYTEILEQLNLGHEDLARLLHSLS 617
Query: 604 CAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXXXXXXXXXXRRYAI 663
C KYKIL KEP ++ IS TD FEFNSKFTDKMRRI++PLPP RRYAI
Sbjct: 618 CLKYKILIKEPMSRNISNTDTFEFNSKFTDKMRRIRVPLPPMDERKKIVEDVDKDRRYAI 677
Query: 664 DASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNM 723
DA++VRIMKSRKVLGHQQLV ECVE L +MFKPD K IKKRIEDLI+RDYLERD NPN
Sbjct: 678 DAALVRIMKSRKVLGHQQLVSECVEHLSKMFKPDIKMIKKRIEDLISRDYLERDTDNPNT 737
Query: 724 FRYLA 728
F+YLA
Sbjct: 738 FKYLA 742
Score = 93 (37.8 bits), Expect = 3.0e-249, Sum P(2) = 3.0e-249
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 6 RKTIDLEQGWEFMQKGITKLKNILEGLP-EPQFSSEDYMMLYT 47
+K LE GW M+ G+ KL+ ILE +P EP F M LYT
Sbjct: 3 KKDSVLEAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYT 45
>TAIR|locus:2018645 [details] [associations]
symbol:AT1G43140 species:3702 "Arabidopsis thaliana"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 EMBL:AC005687 IPI:IPI00938797
RefSeq:NP_175007.2 UniGene:At.74523 ProteinModelPortal:P0CH31
SMR:P0CH31 EnsemblPlants:AT1G43140.1 GeneID:3767291
KEGG:ath:AT1G43140 TAIR:At1g43140 HOGENOM:HOG000176712 OMA:RTISKTD
Uniprot:P0CH31
Length = 721
Score = 1419 (504.6 bits), Expect = 8.4e-243, Sum P(2) = 8.4e-243
Identities = 280/448 (62%), Positives = 347/448 (77%)
Query: 6 RKTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF-----QP------HL 54
++ I LE+GW M+ G+ KL+ ILE L EP F Y+ LYT ++ QP L
Sbjct: 12 KELILLEEGWSVMKTGVAKLQRILEDLSEPPFDPGQYINLYTIIYDMCLQQPPNDYSQEL 71
Query: 55 VSAFVNIL-----LLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR 109
+ + ++ VLPS+RE+H E+MLRELVKRW+NHK++VRWLSRF YLDR+++AR
Sbjct: 72 YNKYRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRFCFYLDRFYVAR 131
Query: 110 RSLPPLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGM 169
R LP LN+VG T F DLVY E+ + +D ++ LI +EREGEQIDR L+KNV+D++ G+
Sbjct: 132 RGLPTLNDVGFTSFHDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKNVIDVYCGNGV 191
Query: 170 GQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSS 229
GQM YE DFE+ +L+DTA+YYSRKAS W EDSCPDYMLKAEECLK EK+RV++YLHS+
Sbjct: 192 GQMVIYEEDFESFLLQDTASYYSRKASRWSQEDSCPDYMLKAEECLKLEKERVTNYLHST 251
Query: 230 SEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSN 289
+EPKL+EKVQ+ELL V A QL+E EHSGC ALLRDDK+ DLSRM+RL+ IP+GL+P+++
Sbjct: 252 TEPKLVEKVQNELLVVVAKQLIENEHSGCLALLRDDKMGDLSRMYRLYRLIPQGLEPIAD 311
Query: 290 IFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQN 349
+FKQHVTAEG AL+K A DAA+N+ A QV VRK IELHDKY+ YV++CFQ
Sbjct: 312 LFKQHVTAEGNALIKQAADAATNQDASA-------SQVLVRKEIELHDKYMVYVDECFQK 364
Query: 350 HTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK-KGGSEKLSDEAIEEMLEKVVK 408
H+LFHK LKEAFEVFCNK VAG+SSAE+LAT+CDNILK +GGSEKLSDEA E LEKVV
Sbjct: 365 HSLFHKLLKEAFEVFCNKTVAGASSAEILATYCDNILKTRGGSEKLSDEATEITLEKVVN 424
Query: 409 LLAYISDKDLFAEFYRKKLARRLLFDKS 436
LL YISDKDLFAEFYRKK ARRLLFD+S
Sbjct: 425 LLVYISDKDLFAEFYRKKQARRLLFDRS 452
Score = 944 (337.4 bits), Expect = 8.4e-243, Sum P(2) = 8.4e-243
Identities = 182/264 (68%), Positives = 211/264 (79%)
Query: 465 VTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEV 524
VTD+TLARE QT+F +YLS N GID TVTVLTTGFWPSYK+ DLNLP EMV CVE
Sbjct: 458 VTDITLARELQTNFVDYLSANMTTKLGIDFTVTVLTTGFWPSYKTTDLNLPTEMVNCVEA 517
Query: 525 FREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEI 584
F+ FY TKT R+L+WIYSLGTC++LGKFE +T EL+V+TYQA+ LLLFN+++RLSY+EI
Sbjct: 518 FKVFYGTKTNSRRLSWIYSLGTCHILGKFEKKTMELVVSTYQAAVLLLFNNAERLSYTEI 577
Query: 585 MTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPP 644
QLNLS +D+VRLLHSLSC KYKIL KEP ++TIS TD FEFNSKFTDKMR+I++PLPP
Sbjct: 578 SEQLNLSHEDLVRLLHSLSCLKYKILIKEPMSRTISKTDTFEFNSKFTDKMRKIRVPLPP 637
Query: 645 XXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKR 704
RRYAIDA++VRIMKSRKVL HQQLV ECVE L +MFKPD K IKKR
Sbjct: 638 MDERKKVVEDVDKDRRYAIDAALVRIMKSRKVLAHQQLVSECVEHLSKMFKPDIKMIKKR 697
Query: 705 IEDLITRDYLERDKSNPNMFRYLA 728
IEDLI RDYLERD N N F+Y+A
Sbjct: 698 IEDLINRDYLERDTENANTFKYVA 721
>TAIR|locus:2205020 [details] [associations]
symbol:CUL3B "AT1G69670" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI;RCA] [GO:0009960 "endosperm
development" evidence=IGI] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009880
"embryonic pattern specification" evidence=RCA] [GO:0010072
"primary shoot apical meristem specification" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009793 GO:GO:0016567 GO:GO:0006511 GO:GO:0009960
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC013289
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
KO:K03869 ProtClustDB:CLSN2912776 EMBL:AJ344541 IPI:IPI00529547
PIR:E96718 RefSeq:NP_177125.3 UniGene:At.35390
ProteinModelPortal:Q9C9L0 SMR:Q9C9L0 IntAct:Q9C9L0 STRING:Q9C9L0
PRIDE:Q9C9L0 EnsemblPlants:AT1G69670.1 GeneID:843303
KEGG:ath:AT1G69670 TAIR:At1g69670 InParanoid:Q9C9L0 OMA:REMIANH
PhylomeDB:Q9C9L0 Genevestigator:Q9C9L0 Uniprot:Q9C9L0
Length = 732
Score = 708 (254.3 bits), Expect = 2.1e-113, Sum P(2) = 2.1e-113
Identities = 157/408 (38%), Positives = 239/408 (58%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
FV+++++ DKY +N F N F +L +FE F N + S E ++ F D+ L+
Sbjct: 332 FVQRLLDERDKYDRIINMAFNNDKTFQNALNSSFEYFVN---LNTRSPEFISLFVDDKLR 388
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + + +E ++ +L+KV+ L Y+ +KD+F ++Y++ LA+RLL K+ +DD ER+++
Sbjct: 389 KG-LKGVGEEDVDLILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERNLIV 447
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM TD+ + + F Y +++P + G L V VLTTG WP+
Sbjct: 448 KLKTECGYQFTSKLEGMFTDMKTSHDTLLGF--Y-NSHPELSEGPTLVVQVLTTGSWPTQ 504
Query: 508 KSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF-ESRTTELIVTTYQ 566
+ NLPAE+ E FR +Y R+L+W ++GT ++ F + + EL V+T+Q
Sbjct: 505 PTIQCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAVFGKGQKHELNVSTFQ 564
Query: 567 ASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYK-ILNKEPNTKTISPTDHF 625
L+LFN+SDRLSY EI + D+ R L S++C K K +L KEP +K I+ D F
Sbjct: 565 MCVLMLFNNSDRLSYKEIEQATEIPTPDLKRCLQSMACVKGKNVLRKEPMSKEIAEEDWF 624
Query: 626 EFNSKFTDKMRRIKIPLPPXXXXXX-----XXXXXXXXRRYAIDASIVRIMKSRKVLGHQ 680
N +F K ++KI R+ I+A+IVRIMKSR+VL H
Sbjct: 625 VVNDRFASKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHN 684
Query: 681 QLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
++ E +QL F + IKKRIE LI RD+LERD ++ ++RYLA
Sbjct: 685 NIIAEVTKQLQTRFLANPTEIKKRIESLIERDFLERDNTDRKLYRYLA 732
Score = 431 (156.8 bits), Expect = 2.1e-113, Sum P(2) = 2.1e-113
Identities = 110/384 (28%), Positives = 202/384 (52%)
Query: 12 EQGWEFMQKGITKLKNI-LEGLPEPQFSSEDY-MMLYTY--LFQPHLVSAFVNILLLVLP 67
++ W+ ++ I ++ N GL + Y M+L+ Y LV+ L +
Sbjct: 26 DKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGDKLYTGLVTTMTFHLKEICK 85
Query: 68 SIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRD-L 126
SI E L L ++W++H ++ + Y+DR +++ ++E+GL +RD +
Sbjct: 86 SIEEAQGGAFLELLNRKWNDHNKALQMIRDILMYMDRTYVSTTKKTHVHELGLHLWRDNV 145
Query: 127 VYT-ELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLK 185
VY+ ++ ++ + ++ L+ +ER GE IDR L++NV+ +F+++G Y++DFE L+
Sbjct: 146 VYSSKIQTRLLNTLLDLVHKERTGEVIDRVLMRNVIKMFMDLGES---VYQDDFEKPFLE 202
Query: 186 DTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSV 245
+A +Y ++ +I C +Y+ KAE+ L E +RV +YL + SE K+ V+ E+++
Sbjct: 203 ASAEFYKVESMEFIESCDCGEYLKKAEKPLVEEVERVVNYLDAKSEAKITSVVEREMIAN 262
Query: 246 YANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKL 305
+ +L+ E+SG +L +DK ED+ RM+ LF ++ GL V ++ H+ G LV
Sbjct: 263 HVQRLVHMENSGLVNMLLNDKYEDMGRMYSLFRRVANGLVTVRDVMTLHLREMGKQLVTD 322
Query: 306 AEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFC 365
E + +D V FV+++++ DKY +N F N F +L +FE F
Sbjct: 323 PE--------KSKDPVE-----FVQRLLDERDKYDRIINMAFNNDKTFQNALNSSFEYFV 369
Query: 366 NKGVAGSSSAELLATFCDNILKKG 389
N + S E ++ F D+ L+KG
Sbjct: 370 N---LNTRSPEFISLFVDDKLRKG 390
>UNIPROTKB|F1RN43 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:FP236214 Ensembl:ENSSSCT00000010475
Uniprot:F1RN43
Length = 761
Score = 761 (272.9 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 168/410 (40%), Positives = 238/410 (58%)
Query: 324 QEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCD 383
+++ V+ +++ D+ ++ CFQ + F +KE+FE F NK + AEL+A D
Sbjct: 359 KDKDMVQDLLDFKDRVDHVIDVCFQRNEKFINLMKESFEAFINK--RPNKPAELIAKHVD 416
Query: 384 NILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHER 443
+ L+ G E +DE +E +L+KV+ + +I KD+F FY+K LA+RLL KSA+ D E+
Sbjct: 417 SKLRAGNKEA-TDEELERILDKVMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEK 475
Query: 444 SILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPG-IDLTVTVLTTG 502
S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ N ++PG IDLTV +LT G
Sbjct: 476 SMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQYMQNQ--SDPGSIDLTVNILTMG 533
Query: 503 FWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIV 562
+WP+Y D++L EMVK EVF+ FY K RKL W +LG L +F+ E V
Sbjct: 534 YWPTYTPMDVHLTPEMVKLQEVFKTFYLGKHSGRKLQWQTALGHAVLKAEFKEGKKEFQV 593
Query: 563 TTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPT 622
+ +Q LL+FN D + EI + D ++ R L SL+C K ++L K P K +
Sbjct: 594 SLFQTLVLLMFNEGDGFGFEEIKAATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDG 653
Query: 623 DHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLG 678
D F FN F K+ RIKI R+Y IDA+IVRIMK RK LG
Sbjct: 654 DKFFFNGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLG 713
Query: 679 HQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
H LV E QL KP +KKRIE LI RDY+ERDK +PN + Y+A
Sbjct: 714 HNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDSPNQYHYVA 761
Score = 283 (104.7 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 72/278 (25%), Positives = 147/278 (52%)
Query: 76 FMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSL-PPLNEVGLTCFRDLVYTE--LN 132
F L+++ W +H + + F +LDR ++ + SL P + ++GL FR V ++ +
Sbjct: 132 FFLKKINTCWQDHCRQMIMVRSIFLFLDRTYVLQNSLLPSIWDMGLELFRSHVISDRMVQ 191
Query: 133 GKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYS 192
K D ++ LI +ER GE +DR+LL+ +L + + + Y++ FE L++T Y+
Sbjct: 192 TKTIDGILLLIARERSGEAVDRSLLRGLLGM-----LSDLQVYKDSFELKFLEETNCLYA 246
Query: 193 RKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLE 252
+ + E P+Y+ + L+ E DRV YL S++ L+ V+ +LL + +L+
Sbjct: 247 AEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAILQ 306
Query: 253 KEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASN 312
K G LL +++V DL++M++LFS++ G + + +++ GT +V E
Sbjct: 307 K---GLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWSEYIKTFGTTIVINPE----K 359
Query: 313 KKAEKRDVVGLQEQV--FVRKVIELHDKYLAYVNDCFQ 348
K +D++ +++V + + ++K++ + + F+
Sbjct: 360 DKDMVQDLLDFKDRVDHVIDVCFQRNEKFINLMKESFE 397
>FB|FBgn0261268 [details] [associations]
symbol:Cul-3 "Cullin-3" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0030162 "regulation of proteolysis" evidence=NAS]
[GO:0001745 "compound eye morphogenesis" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=NAS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007476 "imaginal disc-derived wing morphogenesis"
evidence=IMP] [GO:0007423 "sensory organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=IPI] [GO:0007291 "sperm individualization"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IMP] [GO:0030431 "sleep"
evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045187 "regulation of circadian sleep/wake cycle, sleep"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014134 GO:GO:0030431 GO:GO:0030162 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0048813 GO:GO:0006919 GO:GO:0007291
GO:GO:0007409 GO:GO:0045475 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 GO:GO:0007476 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031463 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0001745 KO:K03869 CTD:34896
OMA:YRTESEN EMBL:BT133182 RefSeq:NP_723909.2 UniGene:Dm.18043
SMR:Q8IP45 IntAct:Q8IP45 EnsemblMetazoa:FBtr0302159 GeneID:34896
KEGG:dme:Dmel_CG42616 UCSC:CG31829-RA FlyBase:FBgn0261268
OrthoDB:EOG43R22K ChiTaRS:Cul-3 GenomeRNAi:34896 NextBio:790768
Uniprot:Q8IP45
Length = 934
Score = 723 (259.6 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 152/488 (31%), Positives = 278/488 (56%)
Query: 73 HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLV--YTE 130
H F L +L + W++H+ + + Y+DR ++ +R + + +GL FRD V Y+E
Sbjct: 257 HSNF-LPKLNQAWTDHQTSMVMIRDILMYMDRVYVQQREVDNVYNLGLILFRDQVVRYSE 315
Query: 131 LNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAY 190
+ +R+ ++ ++ +ER GE I+ +KN + + +G+ YE DFE L +AA+
Sbjct: 316 IQKALREKLLGMVMEERHGEAINHLAIKNACSMLITLGINSRTVYEEDFEKPFLAQSAAF 375
Query: 191 YSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQL 250
Y ++ N++ E++ Y+ K E + E R + YL +EP+++ V+ EL+ + +
Sbjct: 376 YKFESQNFLAENNAGVYIKKVEARITEESSRAALYLDKDTEPRIVRVVEEELIKKHMRPI 435
Query: 251 LEKEHSGCHALLRDDKVEDLSRMFRLFSKIPR-GLDPVSNIFKQHVTAEGTALVKLAEDA 309
+E E+SG ++++ K EDL+ ++LFS++ GL +++ ++ +G LVK E+
Sbjct: 436 VEMENSGVVYMIKNSKTEDLACTYKLFSRLKEEGLKVIADTMSAYLREQGRMLVKEEENG 495
Query: 310 ASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGV 369
+N FV+ +++L D++ ++ F N +F + FE F N
Sbjct: 496 NTNPIT------------FVQNLLDLKDRFDQFLVHSFANDRIFKNVISSDFEHFLN--- 540
Query: 370 AGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLAR 429
+ S E L+ F D+ LKKGG + +S++ IE +L+K + L ++ +KD+F +Y+ LA+
Sbjct: 541 LNNKSPEYLSLFIDDKLKKGG-KGMSEQEIESILDKTMVLFRFLLEKDVFERYYKTHLAK 599
Query: 430 RLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNAN 489
RLL +KS +DD E+++++KLK +CG QFTSK+EGM D++++ F+ +++NN +
Sbjct: 600 RLLLNKSVSDDFEKNMISKLKTECGCQFTSKLEGMFKDMSVSNTIMDEFKNFVNNNNLSL 659
Query: 490 PGIDLTVTVLTTGFWPSYKSF-DLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCN 548
G++LTV +LTTGFWP+ + + N+PA + ++F+ FY K R+LT +GT
Sbjct: 660 GGVELTVRILTTGFWPTQTATPNCNIPAAPREAFDIFKNFYLNKHSGRQLTLQPQMGTAY 719
Query: 549 LLGKFESR 556
+ F R
Sbjct: 720 INAVFYGR 727
Score = 277 (102.6 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 70/178 (39%), Positives = 95/178 (53%)
Query: 560 LIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAK--YKIL--NKEPN 615
L V+TYQ LLLFN+ D L+Y +I + ++ + ++VR L SLS K ++L N +
Sbjct: 757 LQVSTYQMCVLLLFNNRDVLTYDDIHQETDIPERELVRALQSLSMGKPAQRLLVRNSKTK 816
Query: 616 TKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX-----XXXXXXXXRRYAIDASIVRI 670
TK I PTD F N F K R+KI R++ I+A+IVRI
Sbjct: 817 TKDIEPTDEFYVNDAFNSKFHRVKIQTVAAKGESEPERKETRGKVDEDRKHEIEAAIVRI 876
Query: 671 MKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
MK+RK L H LV + QL F P IKKRIE LI R+YL+R + ++ YLA
Sbjct: 877 MKARKRLAHNLLVSDVTSQLKSRFLPSPVFIKKRIEGLIEREYLQRSPEDRKVYNYLA 934
Score = 43 (20.2 bits), Expect = 8.9e-20, Sum P(2) = 8.9e-20
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 356 SLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSD--EAIEEMLEKVVK 408
SLK A + K +G S +L + +L K G+ E + E LE V+
Sbjct: 195 SLKNAIQEIQKKNNSGLSFEQLYRNAYNMVLHKHGNRLYYGLREVVSEHLEHKVR 249
>TAIR|locus:2025881 [details] [associations]
symbol:AT1G59790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00517906 PIR:H96621 RefSeq:NP_176188.1
UniGene:At.52273 ProteinModelPortal:Q9XIE9 SMR:Q9XIE9 PRIDE:Q9XIE9
EnsemblPlants:AT1G59790.1 GeneID:842272 KEGG:ath:AT1G59790
TAIR:At1g59790 OMA:QNELLVM ProtClustDB:CLSN2679703
Genevestigator:Q9XIE9 Uniprot:Q9XIE9
Length = 374
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 183/327 (55%), Positives = 236/327 (72%)
Query: 3 MNERKTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLFQ---------PH 53
M+ + I E+GW +QKGITKL ILEG PEP F + LYT ++
Sbjct: 6 MSRPRQIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQRSDYSQQ 65
Query: 54 LVSAFVNIL-----LLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIA 108
L + ++ VLPS+REKHDE MLRELVKRW+NHK+MV+WLS+FF Y+DR+ +
Sbjct: 66 LYEKYRKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDRHLVR 125
Query: 109 RRSLP-P-LNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVE 166
R +P P L+EVGLTCF DLVY E+ ++ VI LI +EREGEQIDRAL+KNVLDI+VE
Sbjct: 126 RSKIPIPSLDEVGLTCFLDLVYCEMQSTAKEVVIALIHKEREGEQIDRALVKNVLDIYVE 185
Query: 167 IGMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL 226
GMG ++ YE DFE+ ML+DTA+YYSRKAS W EDSCPDYM+K EECLK E++RV+HYL
Sbjct: 186 NGMGTLEKYEEDFESFMLQDTASYYSRKASRWTEEDSCPDYMIKVEECLKMERERVTHYL 245
Query: 227 HSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDP 286
HS +EPKL+EK+Q+ELL + LE EHSG ALLRDDK DLSR++RL+ IP+ L
Sbjct: 246 HSITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDKKNDLSRIYRLYLPIPKRLGR 305
Query: 287 VSNIFKQHVTAEGTALVKLAEDAASNK 313
V+++FK+H+T EG AL+K A+D +N+
Sbjct: 306 VADLFKKHITEEGNALIKQADDKTTNQ 332
Score = 136 (52.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 44/172 (25%), Positives = 83/172 (48%)
Query: 187 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEK--VQHELLS 244
T Y +++L+D+ Y KA E+D Y+ E +E+ V H L S
Sbjct: 190 TLEKYEEDFESFMLQDTASYYSRKASRWT--EEDSCPDYMIKVEECLKMERERVTHYLHS 247
Query: 245 VYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVK 304
+ +L+EK + ++ +++E+ F + + D +S I++ ++ L +
Sbjct: 248 ITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDKKND-LSRIYRLYLPIP-KRLGR 305
Query: 305 LAEDAASNKKAEKRDVVGLQEQVFVRKV-IELHDKYLAYVNDCFQNHTLFHK 355
+A+ + E ++ + ++ IELH+K++ YV +CFQNHTLFHK
Sbjct: 306 VADLFKKHITEEGNALIKQADDKTTNQLLIELHNKFIVYVIECFQNHTLFHK 357
>TAIR|locus:2162060 [details] [associations]
symbol:CUL4 "cullin4" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009640 "photomorphogenesis" evidence=RCA;IMP]
[GO:0048366 "leaf development" evidence=RCA;IMP] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IPI] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:0048367 "shoot system
development" evidence=IMP] [GO:0009755 "hormone-mediated signaling
pathway" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0048575 "short-day photoperiodism, flowering" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009880 "embryonic
pattern specification" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009640 GO:GO:0010182
GO:GO:0009755 GO:GO:0006511 GO:GO:0009908 GO:GO:0048366
GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0048825
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K10609
GO:GO:0080008 GO:GO:0010100 HSSP:Q9JLV5 OMA:FEDSLDF EMBL:AJ318018
EMBL:AB025620 EMBL:AY091113 EMBL:AY084267 IPI:IPI00538554
RefSeq:NP_568658.1 UniGene:At.20972 ProteinModelPortal:Q8LGH4
SMR:Q8LGH4 DIP:DIP-40462N IntAct:Q8LGH4 STRING:Q8LGH4 PaxDb:Q8LGH4
PRIDE:Q8LGH4 EnsemblPlants:AT5G46210.1 GeneID:834663
KEGG:ath:AT5G46210 TAIR:At5g46210 InParanoid:Q8LGH4
PhylomeDB:Q8LGH4 ProtClustDB:CLSN2689940 Genevestigator:Q8LGH4
GO:GO:0048575 Uniprot:Q8LGH4
Length = 792
Score = 741 (265.9 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 158/388 (40%), Positives = 232/388 (59%)
Query: 345 DCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLE 404
+ F + F ++K++FE N + + AEL+A F D L+ G++ S+E +E +LE
Sbjct: 410 ESFYKNESFGNTIKDSFEHLIN--LRQNRPAELIAKFLDEKLR-AGNKGTSEEELESVLE 466
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM 464
KV+ L +I KD+F FY+K LA+RLL KSA+ D E+S+++KLK +CG QFT+K+EGM
Sbjct: 467 KVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGM 526
Query: 465 VTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEV 524
D+ L++E SF++ GI+++V VLTTG+WP+Y D+ LP E+ ++
Sbjct: 527 FKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDI 586
Query: 525 FREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEI 584
F+EFY +K R+L W SLG C L F EL V+ +QA L+LFN + +LS+ +I
Sbjct: 587 FKEFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDAMKLSFEDI 646
Query: 585 MTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL-- 642
++ D ++ R L SL+C K ++L K P + + D FEFN +F + RIK+
Sbjct: 647 KDSTSIEDKELRRTLQSLACGKVRVLQKNPKGRDVEDGDEFEFNDEFAAPLYRIKVNAIQ 706
Query: 643 --PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKA 700
R+Y IDA+IVRIMK+RKVL H L+ E +QL KP
Sbjct: 707 MKETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--AD 764
Query: 701 IKKRIEDLITRDYLERDKSNPNMFRYLA 728
+KKRIE LI R+YLER+KSNP ++ YLA
Sbjct: 765 LKKRIESLIDREYLEREKSNPQIYNYLA 792
Score = 200 (75.5 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 56/205 (27%), Positives = 102/205 (49%)
Query: 102 LDR-YFIARRSLPPLNEVGLTCFRD--LVYTELNGKVRDAVITLIDQEREGEQIDRALLK 158
LDR Y I ++ L E+GL FR + E+ + ++++I++ER E ++R LL
Sbjct: 189 LDRKYVIQNPNVRSLWEMGLQLFRKHLSLAPEVEQRTVKGLLSMIEKERLAEAVNRTLLS 248
Query: 159 NVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKRE 218
++L +F +G+ Y FE L+ T+ +Y+ + ++ + P+Y+ E L E
Sbjct: 249 HLLKMFTALGI-----YMESFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLHEE 303
Query: 219 KDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFS 278
+R Y+ + + L+ V+ +LL + +LEK G L+ + EDL RM LFS
Sbjct: 304 NERCILYIDAVTRKPLITTVERQLLERHILVVLEK---GFTTLMDGRRTEDLQRMQTLFS 360
Query: 279 KIPRGLDPVSNIFKQHVTAEGTALV 303
++ L+ + +V G +V
Sbjct: 361 RV-NALESLRQALSSYVRKTGQKIV 384
>UNIPROTKB|F1MYD0 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:DAAA02011928 IPI:IPI01002552 RefSeq:NP_001180162.1
UniGene:Bt.6490 ProteinModelPortal:F1MYD0
Ensembl:ENSBTAT00000011513 GeneID:407228 KEGG:bta:407228
NextBio:20818478 Uniprot:F1MYD0
Length = 776
Score = 882 (315.5 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 224/699 (32%), Positives = 375/699 (53%)
Query: 60 NILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI------ARRSLP 113
N L +L + DE +L+ ++W +++ + L+ YL+R+++ R+ +
Sbjct: 98 NYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIY 157
Query: 114 PLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD 173
+ + L +RD ++ LN +V +AV+ LI++ER GE I+ L+ V+ +VE+G+ + D
Sbjct: 158 EIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDD 217
Query: 174 ---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSH 224
Y+ FE+ L DT +Y+R+++ ++ ++ +YM KAE L E+ RV
Sbjct: 218 AFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQV 277
Query: 225 YLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGL 284
YLH S++ +L K + L+ + LE H+ LL DK EDL RM+ L S+I GL
Sbjct: 278 YLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGL 333
Query: 285 DPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVN 344
+ + + H+ +G A ++ +AA N +++V+ V+++H KY A V
Sbjct: 334 GELKKLLETHIHNQGLAAIEKCGEAALN-----------DPKMYVQTVLDVHKKYNALVM 382
Query: 345 DCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGSEKLSDEA 398
F N F +L +A F N + S S ELLA +CD++LKK S K +EA
Sbjct: 383 SAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEA 440
Query: 399 -IEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQF 457
+E+ L +V+ + YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++
Sbjct: 441 ELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEY 500
Query: 458 TSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAE 517
TSK++ M D+ ++++ F+++L+N+ + +D ++ VL++G WP +S LP+E
Sbjct: 501 TSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSE 558
Query: 518 MVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSS 576
+ + + F FY ++ RKLTW+Y L L+ F++R T L +T+Q + LL +N+
Sbjct: 559 LERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYT-LQASTFQMAILLQYNTE 617
Query: 577 DRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKE-PNTKTIS--PTDHFEFNSKFTD 633
D + ++ + D + ++L L +K +L E N + P + + +
Sbjct: 618 DAYAVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKN 677
Query: 634 KMRRIKIPLPPXXXXXXXXXXXXXX----RRYAIDASIVRIMKSRKVLGHQQLVLECVEQ 689
K R+ I +P R+ I A+IVRIMK RKVL HQQL+ E + Q
Sbjct: 678 KKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQ 737
Query: 690 LGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
L FKP IKK I+ LI ++YLER + + YLA
Sbjct: 738 LSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 46 (21.3 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 7 KTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
K I L+Q W+ ++ GI ++ + YM LYT+++
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYT------RQSMAKSRYMELYTHVY 50
>UNIPROTKB|E2R1V2 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:AAEX03010158 EMBL:AAEX03010159 RefSeq:XP_848402.1
ProteinModelPortal:E2R1V2 Ensembl:ENSCAFT00000005562 GeneID:475512
KEGG:cfa:475512 Uniprot:E2R1V2
Length = 776
Score = 882 (315.5 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 224/699 (32%), Positives = 375/699 (53%)
Query: 60 NILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI------ARRSLP 113
N L +L + DE +L+ ++W +++ + L+ YL+R+++ R+ +
Sbjct: 98 NYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIY 157
Query: 114 PLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD 173
+ + L +RD ++ LN +V +AV+ LI++ER GE I+ L+ V+ +VE+G+ + D
Sbjct: 158 EIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDD 217
Query: 174 ---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSH 224
Y+ FE+ L DT +Y+R+++ ++ ++ +YM KAE L E+ RV
Sbjct: 218 AFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQV 277
Query: 225 YLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGL 284
YLH S++ +L K + L+ + LE H+ LL DK EDL RM+ L S+I GL
Sbjct: 278 YLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGL 333
Query: 285 DPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVN 344
+ + + H+ +G A ++ +AA N +++V+ V+++H KY A V
Sbjct: 334 GELKKLLETHIHNQGLAAIEKCGEAALN-----------DPKMYVQTVLDVHKKYNALVM 382
Query: 345 DCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGSEKLSDEA 398
F N F +L +A F N + S S ELLA +CD++LKK S K +EA
Sbjct: 383 SAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEA 440
Query: 399 -IEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQF 457
+E+ L +V+ + YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++
Sbjct: 441 ELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEY 500
Query: 458 TSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAE 517
TSK++ M D+ ++++ F+++L+N+ + +D ++ VL++G WP +S LP+E
Sbjct: 501 TSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSE 558
Query: 518 MVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSS 576
+ + + F FY ++ RKLTW+Y L L+ F++R T L +T+Q + LL +N+
Sbjct: 559 LERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYT-LQASTFQMAILLQYNTE 617
Query: 577 DRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKE-PNTKTIS--PTDHFEFNSKFTD 633
D + ++ + D + ++L L +K +L E N + P + + +
Sbjct: 618 DAYAVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKN 677
Query: 634 KMRRIKIPLPPXXXXXXXXXXXXXX----RRYAIDASIVRIMKSRKVLGHQQLVLECVEQ 689
K R+ I +P R+ I A+IVRIMK RKVL HQQL+ E + Q
Sbjct: 678 KKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQ 737
Query: 690 LGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
L FKP IKK I+ LI ++YLER + + YLA
Sbjct: 738 LSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 46 (21.3 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 7 KTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
K I L+Q W+ ++ GI ++ + YM LYT+++
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYT------RQSMAKSRYMELYTHVY 50
>UNIPROTKB|Q13616 [details] [associations]
symbol:CUL1 "Cullin-1" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS;IDA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS;IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0097193 "intrinsic apoptotic
signaling pathway" evidence=TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0008285 GO:GO:0005654 GO:GO:0000082
GO:GO:0008283 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0007050 GO:GO:0016567 GO:GO:0009887 GO:GO:0097193
GO:GO:0019005 GO:GO:0000084 eggNOG:COG5647 GO:GO:0031145
GO:GO:0051437 SUPFAM:SSF75632 EMBL:CH471146 GO:GO:0000080
Reactome:REACT_24941 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 PDB:1U6G PDBsum:1U6G GO:GO:0031146
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY EMBL:U58087
EMBL:AF062536 EMBL:BX537409 EMBL:AC005229 EMBL:BC125119
EMBL:BC125120 IPI:IPI00014310 RefSeq:NP_003583.2 UniGene:Hs.146806
PDB:1LDJ PDB:1LDK PDB:3RTR PDB:3TDU PDB:3TDZ PDB:4F52 PDBsum:1LDJ
PDBsum:1LDK PDBsum:3RTR PDBsum:3TDU PDBsum:3TDZ PDBsum:4F52
ProteinModelPortal:Q13616 SMR:Q13616 DIP:DIP-17013N IntAct:Q13616
MINT:MINT-120495 STRING:Q13616 PhosphoSite:Q13616 DMDM:19863257
PaxDb:Q13616 PeptideAtlas:Q13616 PRIDE:Q13616 DNASU:8454
Ensembl:ENST00000325222 Ensembl:ENST00000409469 GeneID:8454
KEGG:hsa:8454 UCSC:uc003wey.3 CTD:8454 GeneCards:GC07P148395
HGNC:HGNC:2551 HPA:CAB002676 MIM:603134 neXtProt:NX_Q13616
PharmGKB:PA27047 HOVERGEN:HBG106177 InParanoid:Q13616
OrthoDB:EOG4WH8K4 PhylomeDB:Q13616 ChiTaRS:CUL1
EvolutionaryTrace:Q13616 GenomeRNAi:8454 NextBio:31638
ArrayExpress:Q13616 Bgee:Q13616 CleanEx:HS_CUL1
Genevestigator:Q13616 GermOnline:ENSG00000055130 Uniprot:Q13616
Length = 776
Score = 882 (315.5 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 224/699 (32%), Positives = 375/699 (53%)
Query: 60 NILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI------ARRSLP 113
N L +L + DE +L+ ++W +++ + L+ YL+R+++ R+ +
Sbjct: 98 NYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIY 157
Query: 114 PLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD 173
+ + L +RD ++ LN +V +AV+ LI++ER GE I+ L+ V+ +VE+G+ + D
Sbjct: 158 EIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDD 217
Query: 174 ---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSH 224
Y+ FE+ L DT +Y+R+++ ++ ++ +YM KAE L E+ RV
Sbjct: 218 AFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQV 277
Query: 225 YLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGL 284
YLH S++ +L K + L+ + LE H+ LL DK EDL RM+ L S+I GL
Sbjct: 278 YLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGL 333
Query: 285 DPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVN 344
+ + + H+ +G A ++ +AA N +++V+ V+++H KY A V
Sbjct: 334 GELKKLLETHIHNQGLAAIEKCGEAALN-----------DPKMYVQTVLDVHKKYNALVM 382
Query: 345 DCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGSEKLSDEA 398
F N F +L +A F N + S S ELLA +CD++LKK S K +EA
Sbjct: 383 SAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEA 440
Query: 399 -IEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQF 457
+E+ L +V+ + YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++
Sbjct: 441 ELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEY 500
Query: 458 TSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAE 517
TSK++ M D+ ++++ F+++L+N+ + +D ++ VL++G WP +S LP+E
Sbjct: 501 TSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSE 558
Query: 518 MVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSS 576
+ + + F FY ++ RKLTW+Y L L+ F++R T L +T+Q + LL +N+
Sbjct: 559 LERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYT-LQASTFQMAILLQYNTE 617
Query: 577 DRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKE-PNTKTIS--PTDHFEFNSKFTD 633
D + ++ + D + ++L L +K +L E N + P + + +
Sbjct: 618 DAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKN 677
Query: 634 KMRRIKIPLPPXXXXXXXXXXXXXX----RRYAIDASIVRIMKSRKVLGHQQLVLECVEQ 689
K R+ I +P R+ I A+IVRIMK RKVL HQQL+ E + Q
Sbjct: 678 KKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQ 737
Query: 690 LGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
L FKP IKK I+ LI ++YLER + + YLA
Sbjct: 738 LSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 46 (21.3 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 7 KTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
K I L+Q W+ ++ GI ++ + YM LYT+++
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYT------RQSMAKSRYMELYTHVY 50
>UNIPROTKB|Q5R4G6 [details] [associations]
symbol:CUL1 "Cullin-1" species:9601 "Pongo abelii"
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 GeneTree:ENSGT00550000074299
KO:K03347 OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 EMBL:CR861282
RefSeq:NP_001126972.1 UniGene:Pab.18495 ProteinModelPortal:Q5R4G6
SMR:Q5R4G6 PRIDE:Q5R4G6 Ensembl:ENSPPYT00000021153 GeneID:100173991
KEGG:pon:100173991 InParanoid:Q5R4G6 Uniprot:Q5R4G6
Length = 776
Score = 882 (315.5 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 224/699 (32%), Positives = 375/699 (53%)
Query: 60 NILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI------ARRSLP 113
N L +L + DE +L+ ++W +++ + L+ YL+R+++ R+ +
Sbjct: 98 NYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIY 157
Query: 114 PLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD 173
+ + L +RD ++ LN +V +AV+ LI++ER GE I+ L+ V+ +VE+G+ + D
Sbjct: 158 EIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDD 217
Query: 174 ---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSH 224
Y+ FE+ L DT +Y+R+++ ++ ++ +YM KAE L E+ RV
Sbjct: 218 AFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQV 277
Query: 225 YLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGL 284
YLH S++ +L K + L+ + LE H+ LL DK EDL RM+ L S+I GL
Sbjct: 278 YLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGL 333
Query: 285 DPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVN 344
+ + + H+ +G A ++ +AA N +++V+ V+++H KY A V
Sbjct: 334 GELKKLLETHIHNQGLAAIEKCGEAALN-----------DPKMYVQTVLDVHKKYNALVM 382
Query: 345 DCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGSEKLSDEA 398
F N F +L +A F N + S S ELLA +CD++LKK S K +EA
Sbjct: 383 SAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEA 440
Query: 399 -IEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQF 457
+E+ L +V+ + YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++
Sbjct: 441 ELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEY 500
Query: 458 TSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAE 517
TSK++ M D+ ++++ F+++L+N+ + +D ++ VL++G WP +S LP+E
Sbjct: 501 TSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSE 558
Query: 518 MVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSS 576
+ + + F FY ++ RKLTW+Y L L+ F++R T L +T+Q + LL +N+
Sbjct: 559 LERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYT-LQASTFQMAILLQYNTE 617
Query: 577 DRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKE-PNTKTIS--PTDHFEFNSKFTD 633
D + ++ + D + ++L L +K +L E N + P + + +
Sbjct: 618 DAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKN 677
Query: 634 KMRRIKIPLPPXXXXXXXXXXXXXX----RRYAIDASIVRIMKSRKVLGHQQLVLECVEQ 689
K R+ I +P R+ I A+IVRIMK RKVL HQQL+ E + Q
Sbjct: 678 KKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQ 737
Query: 690 LGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
L FKP IKK I+ LI ++YLER + + YLA
Sbjct: 738 LSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 46 (21.3 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 7 KTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
K I L+Q W+ ++ GI ++ + YM LYT+++
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYT------RQSMAKSRYMELYTHVY 50
>MGI|MGI:1349658 [details] [associations]
symbol:Cul1 "cullin 1" species:10090 "Mus musculus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0006513 "protein monoubiquitination" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IC] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO;IDA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO;IDA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1349658 GO:GO:0006915 GO:GO:0019048
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4
ChiTaRS:CUL1 EMBL:AF083216 EMBL:AF176910 EMBL:AF136441
EMBL:BC029260 IPI:IPI00124047 RefSeq:NP_036172.1 UniGene:Mm.87611
ProteinModelPortal:Q9WTX6 SMR:Q9WTX6 DIP:DIP-39799N IntAct:Q9WTX6
STRING:Q9WTX6 PhosphoSite:Q9WTX6 PaxDb:Q9WTX6 PRIDE:Q9WTX6
Ensembl:ENSMUST00000031697 GeneID:26965 KEGG:mmu:26965
UCSC:uc009bsz.1 InParanoid:Q9WTX6 NextBio:304903 Bgee:Q9WTX6
CleanEx:MM_CUL1 Genevestigator:Q9WTX6 GermOnline:ENSMUSG00000029686
Uniprot:Q9WTX6
Length = 776
Score = 882 (315.5 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 224/699 (32%), Positives = 375/699 (53%)
Query: 60 NILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI------ARRSLP 113
N L +L + DE +L+ ++W +++ + L+ YL+R+++ R+ +
Sbjct: 98 NYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIY 157
Query: 114 PLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD 173
+ + L +RD ++ LN +V +AV+ LI++ER GE I+ L+ V+ +VE+G+ + D
Sbjct: 158 EIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDD 217
Query: 174 ---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSH 224
Y+ FE+ L DT +Y+R+++ ++ ++ +YM KAE L E+ RV
Sbjct: 218 AFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQV 277
Query: 225 YLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGL 284
YLH S++ +L K + L+ + LE H+ LL DK EDL RM+ L S+I GL
Sbjct: 278 YLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGL 333
Query: 285 DPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVN 344
+ + + H+ +G A ++ +AA N +++V+ V+++H KY A V
Sbjct: 334 GELKKLLETHIHNQGLAAIEKCGEAALN-----------DPKMYVQTVLDVHKKYNALVM 382
Query: 345 DCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGSEKLSDEA 398
F N F +L +A F N + S S ELLA +CD++LKK S K +EA
Sbjct: 383 SAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEA 440
Query: 399 -IEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQF 457
+E+ L +V+ + YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++
Sbjct: 441 ELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEY 500
Query: 458 TSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAE 517
TSK++ M D+ ++++ F+++L+N+ + +D ++ VL++G WP +S LP+E
Sbjct: 501 TSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSE 558
Query: 518 MVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSS 576
+ + + F FY ++ RKLTW+Y L L+ F++R T L +T+Q + LL +N+
Sbjct: 559 LERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYT-LQASTFQMAILLQYNTE 617
Query: 577 DRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKE-PNTKTIS--PTDHFEFNSKFTD 633
D + ++ + D + ++L L +K +L E N + P + + +
Sbjct: 618 DAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKN 677
Query: 634 KMRRIKIPLPPXXXXXXXXXXXXXX----RRYAIDASIVRIMKSRKVLGHQQLVLECVEQ 689
K R+ I +P R+ I A+IVRIMK RKVL HQQL+ E + Q
Sbjct: 678 KKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQ 737
Query: 690 LGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
L FKP IKK I+ LI ++YLER + + YLA
Sbjct: 738 LSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 46 (21.3 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 7 KTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
K I L+Q W+ ++ GI ++ + YM LYT+++
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYT------RQSMAKSRYMELYTHVY 50
>RGD|1308157 [details] [associations]
symbol:Cul1 "cullin 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008283 "cell proliferation" evidence=IEA;ISO]
[GO:0009887 "organ morphogenesis" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1308157 GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009887 GO:GO:0006511 GO:GO:0019005
EMBL:CH473959 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY CTD:8454
HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4 EMBL:BC161932 IPI:IPI00358206
RefSeq:NP_001102097.1 UniGene:Rn.68078 SMR:B1WBY1 STRING:B1WBY1
Ensembl:ENSRNOT00000007620 GeneID:362356 KEGG:rno:362356
UCSC:RGD:1308157 NextBio:679624 Genevestigator:B1WBY1
Uniprot:B1WBY1
Length = 776
Score = 882 (315.5 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 224/699 (32%), Positives = 375/699 (53%)
Query: 60 NILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI------ARRSLP 113
N L +L + DE +L+ ++W +++ + L+ YL+R+++ R+ +
Sbjct: 98 NYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIY 157
Query: 114 PLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD 173
+ + L +RD ++ LN +V +AV+ LI++ER GE I+ L+ V+ +VE+G+ + D
Sbjct: 158 EIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDD 217
Query: 174 ---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSH 224
Y+ FE+ L DT +Y+R+++ ++ ++ +YM KAE L E+ RV
Sbjct: 218 AFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQV 277
Query: 225 YLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGL 284
YLH S++ +L K + L+ + LE H+ LL DK EDL RM+ L S+I GL
Sbjct: 278 YLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGL 333
Query: 285 DPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVN 344
+ + + H+ +G A ++ +AA N +++V+ V+++H KY A V
Sbjct: 334 GELKKLLETHIHNQGLAAIEKCGEAALN-----------DPKMYVQTVLDVHKKYNALVM 382
Query: 345 DCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGSEKLSDEA 398
F N F +L +A F N + S S ELLA +CD++LKK S K +EA
Sbjct: 383 SAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEA 440
Query: 399 -IEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQF 457
+E+ L +V+ + YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++
Sbjct: 441 ELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEY 500
Query: 458 TSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAE 517
TSK++ M D+ ++++ F+++L+N+ + +D ++ VL++G WP +S LP+E
Sbjct: 501 TSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSE 558
Query: 518 MVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSS 576
+ + + F FY ++ RKLTW+Y L L+ F++R T L +T+Q + LL +N+
Sbjct: 559 LERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYT-LQASTFQMAILLQYNTE 617
Query: 577 DRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKE-PNTKTIS--PTDHFEFNSKFTD 633
D + ++ + D + ++L L +K +L E N + P + + +
Sbjct: 618 DAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKN 677
Query: 634 KMRRIKIPLPPXXXXXXXXXXXXXX----RRYAIDASIVRIMKSRKVLGHQQLVLECVEQ 689
K R+ I +P R+ I A+IVRIMK RKVL HQQL+ E + Q
Sbjct: 678 KKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQ 737
Query: 690 LGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
L FKP IKK I+ LI ++YLER + + YLA
Sbjct: 738 LSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 46 (21.3 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 7 KTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
K I L+Q W+ ++ GI ++ + YM LYT+++
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYT------RQSMAKSRYMELYTHVY 50
>DICTYBASE|DDB_G0291972 [details] [associations]
symbol:culA "cullin A" species:44689 "Dictyostelium
discoideum" [GO:0030587 "sorocarp development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0291972 GO:GO:0030154
GenomeReviews:CM000155_GR GO:GO:0000082 EMBL:AAFI02000187
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030587 GO:GO:0006935
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647
SUPFAM:SSF75632 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
OMA:SGVINCY EMBL:AF020287 RefSeq:XP_629756.1 HSSP:Q13616
ProteinModelPortal:O60999 SMR:O60999 STRING:O60999
EnsemblProtists:DDB0185191 GeneID:8628431 KEGG:ddi:DDB_G0291972
ProtClustDB:CLSZ2429454 Uniprot:O60999
Length = 770
Score = 870 (311.3 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 232/728 (31%), Positives = 376/728 (51%)
Query: 31 GLPEPQFSSEDYMMLYTYLFQPHLVSAFVNILLLVLPSIRE-KHDEFMLRELVKRWSNHK 89
G+P+ Q S +Y+ Y + ++ F+ + L + E K DE +L W +
Sbjct: 65 GMPKQQASGANYVGEDLY----NRLNLFLKKHMSQLLKLTETKMDEPLLNYYYTEWDRYT 120
Query: 90 VMVRWLSRFFHYLDRYFIARRSLPPLNEV------GLTCFRDLVYTELNGKVRDAVITLI 143
+++++ F Y++RY+I R EV L +RD ++T L ++ ++++ +I
Sbjct: 121 SAMKYINNIFQYMNRYWIKREIDDGKKEVYEIFILSLVIWRDCLFTPLKQRLTNSLLDII 180
Query: 144 DQEREGEQIDRALLKNVLDIFVEIGMGQ-------MDYYENDFETAMLKDTAAYYSRKAS 196
+ ER G QI+ L+K V++ +V +G+ + + Y++ FE L T YY+ +++
Sbjct: 181 ESERNGYQINTHLIKGVINGYVSLGLNREKPKETILQVYKSGFEELFLTATENYYTNESA 240
Query: 197 NWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHS 256
+I E+S DYM K E L E RV YLH ++E +L+ K + L+ + +++ E
Sbjct: 241 KFISENSVADYMKKVETRLNEEVKRVQQYLHQNTESELIAKCEKVLIEKHV-EVIWNEFQ 299
Query: 257 GCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAE 316
LL DK+ DL+RM+ L S+IPRGL+P+ ++HV G V A+N E
Sbjct: 300 ---TLLEKDKIPDLTRMYSLLSRIPRGLEPLRTTLEKHVQNVGLQAVS---SIATNGVIE 353
Query: 317 KRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKG---VAGSS 373
+ V++ ++++ KY V F++ T F SL +A F N+ +A S
Sbjct: 354 PK--------VYIETLLKVFKKYNELVTGAFRSDTGFVASLDKACRRFINENAVTIAAKS 405
Query: 374 SA---ELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARR 430
S+ ELLA F D +LKK + E +E++L V+ + YI DKD+F +FY K LA+R
Sbjct: 406 SSKSPELLARFTDFLLKKSPNNPEESE-MEQLLNDVMIVFKYIEDKDVFQDFYSKMLAKR 464
Query: 431 LLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANP 490
L+ S ++D E +++ KLK CG ++TSK++ M TD++L+RE F ++ ++
Sbjct: 465 LIHGTSTSEDLEGTMIGKLKSTCGYEYTSKLQRMFTDMSLSRELLDRFNNHIEQVERSSL 524
Query: 491 GIDLTVTVLTTGFWPSYK-SFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNL 549
ID +V VL TG WP S + ++P E+ C ++F++FYQ + RKL W++ L L
Sbjct: 525 NIDFSVLVLATGSWPLQPPSTNFSIPKELQACEQLFQKFYQNQHSGRKLNWLHHLSKGEL 584
Query: 550 LGKFESRTTE---LIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAK 606
K+ + L +TYQ LL FN + L+ EI L D + L SL AK
Sbjct: 585 KTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSVLKGTLTSL--AK 642
Query: 607 YKILNKEP--NTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXXXXXXXXXX----RR 660
KIL +P + + I+ T F N +F +K +I I +P R+
Sbjct: 643 SKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQVKEEIDSIHKTVEEDRK 702
Query: 661 YAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSN 720
I A+IVRIMK RK L H L+ E + QL F P IKK I+ LI ++YL R +
Sbjct: 703 LQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIEKEYLMRVEGK 762
Query: 721 PNMFRYLA 728
+ + Y+A
Sbjct: 763 KDHYSYVA 770
Score = 49 (22.3 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 10/46 (21%), Positives = 29/46 (63%)
Query: 6 RKTIDLEQGWEFMQKGITKL-KNILEGLPEPQFSSEDYMMLYTYLF 50
++++ L+ W +++GI K+ ++ +G P+ + ++ LYT+++
Sbjct: 10 KRSVKLDDIWPELEEGIYKIITDLNKGFPK-----QKWIALYTHVY 50
>ZFIN|ZDB-GENE-030131-2603 [details] [associations]
symbol:cul1a "cullin 1a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-2603 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 HSSP:Q9JLV5 EMBL:BC045445
IPI:IPI00495948 UniGene:Dr.76883 ProteinModelPortal:Q7ZVR2
SMR:Q7ZVR2 STRING:Q7ZVR2 InParanoid:Q7ZVR2 ArrayExpress:Q7ZVR2
Uniprot:Q7ZVR2
Length = 777
Score = 872 (312.0 bits), Expect = 4.4e-90, Sum P(2) = 4.4e-90
Identities = 225/699 (32%), Positives = 376/699 (53%)
Query: 60 NILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI------ARRSLP 113
N L +L + DE +L+ ++W +++ + L+ YL+R+++ R+
Sbjct: 99 NYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGTY 158
Query: 114 PLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD 173
+ + L +R+ ++ LN +V +AV+ LI++ER GE I+ L+ V+ +VE+G+ + D
Sbjct: 159 EIYSLALVTWRECLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDD 218
Query: 174 ---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSH 224
Y+ FET L DT +Y+R+++ ++ ++ +YM KAE L E+ RV
Sbjct: 219 AFAKGPTLSVYKEYFETQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQV 278
Query: 225 YLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGL 284
YLH S++ +L K + L+ + LE H+ LL DK EDL RM+ L S+I GL
Sbjct: 279 YLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGL 334
Query: 285 DPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVN 344
+ + + H+ +G A ++ ++A N +++V+ ++++H KY A V
Sbjct: 335 GELKKLLETHIYNQGLAAIEKCGESALN-----------DPKMYVQTILDVHKKYNALVM 383
Query: 345 DCFQNHTLFHKSLKEAFEVFCN-----KGVAGSS-SAELLATFCDNILKKGGSEKLSDEA 398
F N F +L +A F N K V SS S ELLA +CD++LKK S K +EA
Sbjct: 384 SAFNNDAGFVAALDKACGRFINNNAVTKMVQSSSKSPELLARYCDSLLKK--SSKNPEEA 441
Query: 399 -IEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQF 457
+E+ L +V+ + YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++
Sbjct: 442 ELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEY 501
Query: 458 TSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAE 517
TSK++ M D+ ++++ F+++L+N+ + +D ++ VL++G WP +S LP+E
Sbjct: 502 TSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSE 559
Query: 518 MVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSS 576
+ + + F FY ++ RKLTW+Y L L+ F++R T L +T+Q + LL +N+
Sbjct: 560 LERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRYT-LQASTFQMAILLQYNTE 618
Query: 577 DRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKE-PNTKTIS--PTDHFEFNSKFTD 633
D + ++ + D +V++L L +K +L E N + P + + +
Sbjct: 619 DVYTVQQLTDSTQIKIDILVQVLQILLKSKLLVLEDENANVDEVEFKPDTLIKLFLGYKN 678
Query: 634 KMRRIKIPLPPXXXXXXXXXXXXXX----RRYAIDASIVRIMKSRKVLGHQQLVLECVEQ 689
K R+ I +P R+ I A+IVR MK RKVL HQQL+ E + Q
Sbjct: 679 KKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRTMKMRKVLKHQQLLAEVLNQ 738
Query: 690 LGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
L FKP IKK I+ LI ++YLER + + YLA
Sbjct: 739 LSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 777
Score = 46 (21.3 bits), Expect = 4.4e-90, Sum P(2) = 4.4e-90
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 7 KTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
K I L+Q W+ ++ GI ++ + YM LYT+++
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYT------RQSMAKSRYMELYTHVY 50
>ZFIN|ZDB-GENE-040426-2887 [details] [associations]
symbol:cul1b "cullin 1b" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-040426-2887 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX005392
IPI:IPI00609210 Ensembl:ENSDART00000134947 ArrayExpress:F1Q7M5
Bgee:F1Q7M5 Uniprot:F1Q7M5
Length = 775
Score = 866 (309.9 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 221/686 (32%), Positives = 367/686 (53%)
Query: 74 DEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI------ARRSLPPLNEVGLTCFRDLV 127
DE +L+ ++W +++ + L YL+R+++ R+ + + + L +R+ +
Sbjct: 110 DESVLKFYTQQWEDYRFSSKVLDGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECL 169
Query: 128 YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---------YYEND 178
+ LN +V +AV+ L+++ER GE I+ L+ V+ +VE+G+ + D Y+
Sbjct: 170 FRPLNKQVTNAVLKLVEKERNGETINTRLVSGVVQSYVELGLNEDDAFVKGPTLSVYKEY 229
Query: 179 FETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKV 238
FE L DT +Y+R+++ ++ ++ +YM KAE L E+ RV YLH S++ +L K
Sbjct: 230 FEAQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC 289
Query: 239 QHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAE 298
+ L+ + LE H+ LL DK EDL RM+ L S+I GL + + + H+ +
Sbjct: 290 EQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLESHIHNQ 345
Query: 299 GTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSL- 357
G A ++ D+A N +++V+ +++H KY A V F N F +L
Sbjct: 346 GLAAIEKCGDSALN-----------DPKMYVQTTLDVHKKYNALVMSAFNNDAGFVAALD 394
Query: 358 KEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGSEKLSDEA-IEEMLEKVVKLL 410
K A F N + S S ELLA +CD++LKK S K +EA +E+ L +V+ +
Sbjct: 395 KVACGRFINNNAVTRMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVF 452
Query: 411 AYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 470
YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ +
Sbjct: 453 KYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGV 512
Query: 471 ARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQ 530
+++ F+++LSN+ + +D ++ VL++G WP +S LP+E+ + + F FY
Sbjct: 513 SKDLNEQFKKHLSNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYG 570
Query: 531 TKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLN 589
++ RKLTW+Y L L+ F++R T L +T+Q + LL FN+ + S ++
Sbjct: 571 SRHSGRKLTWLYHLSKGELVTNCFKNRYT-LQASTFQMAILLQFNTENCYSVQQLADSTQ 629
Query: 590 LSDDDVVRLLHSLSCAKYKILNKEP---NTKTISPTDHFEFNSKFTDKMRRIKIPLPPXX 646
+ D +V++L L +K +L E + P + + +K R+ I +P
Sbjct: 630 IKTDILVQVLQILLKSKLLVLEDENANIDEMDFKPDTLIKLFLGYKNKKLRVNINVPMKT 689
Query: 647 XXXXXXXXXXXX----RRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIK 702
R+ I A+IVRIMK RKVL HQQL+ E + QL FKP IK
Sbjct: 690 EQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIK 749
Query: 703 KRIEDLITRDYLERDKSNPNMFRYLA 728
K I+ LI ++YLER + + YLA
Sbjct: 750 KCIDILIEKEYLERVDGEKDTYSYLA 775
Score = 49 (22.3 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 7 KTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
K I LEQ W+ ++ GI ++ + YM LYT+++
Sbjct: 13 KQIGLEQIWDDLRSGIQQVYT------RQSMARSRYMELYTHVY 50
>UNIPROTKB|F1SAD7 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SGVINCY EMBL:CU915471
EMBL:FP565440 Ensembl:ENSSSCT00000016837 Uniprot:F1SAD7
Length = 778
Score = 868 (310.6 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
Identities = 223/700 (31%), Positives = 374/700 (53%)
Query: 60 NILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI------ARRSLP 113
N L +L + DE +L+ ++W +++ + L+ YL+R+++ R+ +
Sbjct: 98 NYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIY 157
Query: 114 PLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD 173
+ + L +RD ++ LN +V +AV+ LI++ER GE I+ L+ V+ +VE+G+ + D
Sbjct: 158 EIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDD 217
Query: 174 ---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSH 224
Y+ FE+ L DT +Y+R+++ ++ ++ +YM KAE L E+ RV
Sbjct: 218 AFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQV 277
Query: 225 YLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGL 284
YLH S++ +L K + L+ + LE H+ LL DK EDL RM+ L S+I GL
Sbjct: 278 YLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGL 333
Query: 285 DPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVN 344
+ + + H+ +G A ++ +AA N +++V+ V+++H KY A V
Sbjct: 334 GELKKLLETHIHNQGLAAIEKCGEAALN-----------DPKMYVQTVLDVHKKYNALVM 382
Query: 345 DCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGSEKLSDEA 398
F N F +L +A F N + S S ELLA +CD++LKK S K +EA
Sbjct: 383 SAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEA 440
Query: 399 -IEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT-KLKQQCGGQ 456
+E+ L +V+ + YI DKD+F +FY K LA+ L+ SA+DD E S+++ KLKQ CG +
Sbjct: 441 ELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAK-LVHQNSASDDAEASMISNKLKQACGFE 499
Query: 457 FTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPA 516
+TSK++ M D+ ++++ F+++L+N+ + +D ++ VL++G WP +S LP+
Sbjct: 500 YTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDSPVDFSIQVLSSGSWPFQQSCTFALPS 559
Query: 517 EMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNS 575
E+ + + F FY ++ RKLTW+Y L L+ F++R T L +T+Q + LL +N+
Sbjct: 560 ELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYT-LQASTFQMAILLQYNT 618
Query: 576 SDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKE-PNTKTIS--PTDHFEFNSKFT 632
D + ++ + D + ++L L +K +L E N + P + +
Sbjct: 619 EDAYAVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYK 678
Query: 633 DKMRRIKIPLPPXXXXXXXXXXXXXX----RRYAIDASIVRIMKSRKVLGHQQLVLECVE 688
+K R+ I +P R+ I A+IVRIMK RKVL HQQL+ E +
Sbjct: 679 NKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLT 738
Query: 689 QLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
QL FKP IKK I+ LI ++YLER + + YLA
Sbjct: 739 QLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 778
Score = 46 (21.3 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 7 KTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
K I L+Q W+ ++ GI ++ + YM LYT+++
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYT------RQSMAKSRYMELYTHVY 50
>ASPGD|ASPL0000060435 [details] [associations]
symbol:culA species:162425 "Emericella nidulans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069 SMART:SM00182
SMART:SM00884 EMBL:BN001308 GO:GO:0016874 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713 OMA:SGVINCY
EnsemblFungi:CADANIAT00001628 Uniprot:C8VU45
Length = 764
Score = 828 (296.5 bits), Expect = 3.9e-87, Sum P(2) = 3.9e-87
Identities = 208/673 (30%), Positives = 360/673 (53%)
Query: 74 DEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR------RSLPPLNEVGLTCFRDLV 127
DE +L ++ W + ++++ F YL+R+++ R +++ + L +++
Sbjct: 100 DEALLSFYIREWQRYTTAAKYINHLFRYLNRHWVKREIDEGKKNVYDVYTQHLVKWKEDF 159
Query: 128 YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD-------YYENDFE 180
+ +++ KV AV+ L++++R GE I+++ +K+++D FV +G+ + D Y F+
Sbjct: 160 FLKVHEKVMGAVLKLVEKQRNGETIEQSRIKSIVDSFVSLGLDETDPTKSTLEIYRYYFQ 219
Query: 181 TAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQH 240
L+ T YY ++ ++ ++S +YM KAE L+ EK RV YL++ L
Sbjct: 220 RPFLEATRIYYEDESRQFVADNSVVEYMKKAEIRLEEEKARVGLYLNNDISKDLTSTCLD 279
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGT 300
L++ ++ +LL E LL +++ +DL+RM+RL S+I GLDP+ F+ HV G
Sbjct: 280 VLVTAHS-ELLRDEFQ---PLLDNERQDDLARMYRLLSRIKDGLDPLRTKFEAHVRRAGL 335
Query: 301 ALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEA 360
+ V+ K A + D + +++V ++ +H +Y + V + F + F +SL A
Sbjct: 336 SAVE--------KVAAEGD--SFEPKMYVDALLSVHTRYHSLVKEAFNGESEFVRSLDNA 385
Query: 361 FEVFCNKGV---AGSSSA-ELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDK 416
F N+ +GS+ ELLA + D++LK+G S+ + +EEML +++ + YI DK
Sbjct: 386 CREFVNRNKICKSGSTKTPELLAKYTDSLLKRG-SKAAEESELEEMLVQIMTVFKYIEDK 444
Query: 417 DLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQT 476
D+F +FY K LA+RL+ S +DD E S+++KLK+ CG ++T+K++ M D+ ++++ +
Sbjct: 445 DVFQKFYSKMLAKRLVHVSSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQISKDLNS 504
Query: 477 SFEEYLS----NNPNANPGIDLTVTVLTTGFWP-SYKSFDLNLPAEMVKCVEVFREFYQT 531
S++++L ++ + +D +L TGFWP + S P E+VK E F++FY
Sbjct: 505 SYKDWLEKSFLDDDDRKKLVDSHFQILGTGFWPLTAPSTSFLAPPEIVKTSERFQKFYCD 564
Query: 532 KTKHRKLTWIYSLGTCNLLGKFESRTT---ELIVTTYQASALLLFNSSDRLSYSEIMTQL 588
K RKLTW++ L L + T +V+TYQ LLLFN SD L+YS+I
Sbjct: 565 KHNGRKLTWLWQLCKGELKANYIKNTKVPYTFLVSTYQMGILLLFNESDTLTYSDIQKAT 624
Query: 589 NLSDDDVVRLLHSLSC-AKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLP---- 643
L+ + L +LS K K+LN P P F N F +K ++ + +
Sbjct: 625 TLTPEI---LDPNLSIFLKAKVLNISPEGSKPGPDSTFSLNYNFKNKKIKVNLNIQIRSE 681
Query: 644 PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKK 703
R+ + ++IVRIMKSRK + H QLV E + Q+ F P IKK
Sbjct: 682 QKVETDDTHKTIEEDRKLLLQSAIVRIMKSRKKMKHVQLVQEVIHQVKSRFPPQVPDIKK 741
Query: 704 RIEDLITRDYLER 716
IE L+ +DY+ER
Sbjct: 742 NIEALMEKDYIER 754
Score = 62 (26.9 bits), Expect = 3.9e-87, Sum P(2) = 3.9e-87
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 10 DLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYT 47
DLE+ W F++ GI N++ L E ++YM LYT
Sbjct: 13 DLEETWVFLENGIN---NVMVKL-EDGVDMKNYMALYT 46
>UNIPROTKB|E1C0W8 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:SGVINCY
EMBL:AADN02027289 EMBL:AADN02027286 EMBL:AADN02027287
EMBL:AADN02027288 IPI:IPI00590577 Ensembl:ENSGALT00000020252
Uniprot:E1C0W8
Length = 777
Score = 826 (295.8 bits), Expect = 3.1e-85, Sum P(2) = 3.1e-85
Identities = 216/700 (30%), Positives = 371/700 (53%)
Query: 60 NILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI------ARRSLP 113
N L +L + DE +L+ ++W +++ + L+ YL+R+++ R+ +
Sbjct: 98 NYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIY 157
Query: 114 PLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFV-EIGMGQM 172
+ + L +RD ++ LN +V++ + ++++ ++ L+ +L +FV E+G+ +
Sbjct: 158 EIYSLALVTWRDCLFRPLNKQVQNKCLLKKKKKKKAMRMLSQLITFILLVFVVELGLNED 217
Query: 173 D---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVS 223
D Y+ FE+ L DT +Y+R+++ ++ ++ +YM KAE L E+ RV
Sbjct: 218 DAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQ 277
Query: 224 HYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRG 283
YLH S++ +L K + L+ + LE H+ LL DK EDL RM+ L S+I G
Sbjct: 278 VYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDG 333
Query: 284 LDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYV 343
L + + + H+ +G A ++ +AA N +++V+ V+++H KY A V
Sbjct: 334 LGELKKLLETHIHNQGLAAIEKCGEAALN-----------DPKMYVQTVLDVHKKYNALV 382
Query: 344 NDCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGSEKLSDE 397
F N F +L +A F N + S S ELLA +CD++LKK S K +E
Sbjct: 383 MSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEE 440
Query: 398 A-IEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQ 456
A +E+ L +V+ + YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG +
Sbjct: 441 AELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFE 500
Query: 457 FTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPA 516
+TSK++ M D+ ++++ F+++L+N+ + +D ++ VL++G WP +S LP+
Sbjct: 501 YTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPS 558
Query: 517 EMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNS 575
E+ + + F FY ++ RKLTW+Y L L+ F++R T L +T+Q + LL +N+
Sbjct: 559 ELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYT-LQASTFQMAILLQYNT 617
Query: 576 SDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKE-PNTKTIS--PTDHFEFNSKFT 632
D + ++ + D + ++L L +K +L E N + P + +
Sbjct: 618 EDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYK 677
Query: 633 DKMRRIKIPLPPXXXXXXXXXXXXXX----RRYAIDASIVRIMKSRKVLGHQQLVLECVE 688
+K R+ I +P R+ I A+IVRIMK RKVL HQQL+ E +
Sbjct: 678 NKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLT 737
Query: 689 QLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
QL FKP IKK I+ LI ++YLER + + YLA
Sbjct: 738 QLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 777
Score = 46 (21.3 bits), Expect = 3.1e-85, Sum P(2) = 3.1e-85
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 7 KTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
K I L+Q W+ ++ GI ++ + YM LYT+++
Sbjct: 13 KQIGLDQIWDDLRAGIQQVYT------RQSMAKSRYMELYTHVY 50
>WB|WBGene00000838 [details] [associations]
symbol:cul-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0044254 "multicellular organismal protein
catabolic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0035046 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176712 KO:K03869
OMA:ATFYGPI EMBL:U58085 EMBL:FO081768 RefSeq:NP_503151.1
ProteinModelPortal:Q17391 SMR:Q17391 IntAct:Q17391 MINT:MINT-274347
STRING:Q17391 PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 629 (226.5 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 164/565 (29%), Positives = 290/565 (51%)
Query: 8 TID---LEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPH---LVSAFV 59
TID + Q WE +++ I ++ KN GL F E Y YT + H L +
Sbjct: 21 TIDEQYVTQTWELLKRAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGERLYNGLK 75
Query: 60 NILLLVLPSIREKHDEFM-----LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LP 113
+++ + S+R + E M L + + W++H V + + Y+DR ++A+ + +
Sbjct: 76 DVIQDHMASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDRIYVAQNNHVL 135
Query: 114 PLNEVGLTCFRDLVYTELNG---KVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMG 170
P+ +GL +R + + NG ++RDA++ LI +R+ QI+ +KN D+ + +G+
Sbjct: 136 PVYNLGLDAYRTEILRQ-NGIGDRIRDALLELIKLDRKSNQINWHGIKNACDMLISLGID 194
Query: 171 QMDYYENDFETAMLKDTAAYYSRKASNWIL--EDSCPDYMLKAEECLKREKDRVSHYLHS 228
YE++FE +LK+T+ YY NW+ D+C Y+ + E + E R S YL
Sbjct: 195 SRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDAC-FYLAQVEIAMHDEASRASRYLDK 253
Query: 229 SSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVS 288
+E K+L+ + +++ + ++ ++ G +L K+EDL+R+FR+F +I +
Sbjct: 254 MTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPG 313
Query: 289 NIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQ 348
K + A L + + N+ K V FV ++++L D + + + F
Sbjct: 314 GGLKALLKAVSEYLNETGSNIVKNEDLLKNPVN------FVNELLQLKDYFSSLLTTAFA 367
Query: 349 NHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVK 408
+ F + FE F N + S E +A + D++L+ G + +SD ++ L+ V+
Sbjct: 368 DDRDFKNRFQHDFETFLN---SNRQSPEFVALYMDDMLRSG-LKCVSDAEMDNKLDNVMI 423
Query: 409 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 468
L Y+ +KD+F +++++ LA+RLL DKS +DD E+++L KLK +CG QFT K+E M D
Sbjct: 424 LFRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDK 483
Query: 469 TLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREF 528
L TSF ++ P ID+++ VLT G WP+ + + LP E+ E+F ++
Sbjct: 484 ELWLTLATSFRDWREAQPT-KMSIDISLRVLTAGVWPTVQCNPVVLPQELSVAYEMFTQY 542
Query: 529 YQTKTKHRKLTWIYSLGTCNLLGKF 553
Y K RKLT LG ++ F
Sbjct: 543 YTEKHTGRKLTINTLLGNADVKATF 567
Score = 239 (89.2 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 61/177 (34%), Positives = 91/177 (51%)
Query: 560 LIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAK--YKIL-NKEPNT 616
L V T+Q LL FN +R+S ++M +L + + ++ R L SL+ K +IL K
Sbjct: 601 LQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGK 660
Query: 617 KTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX-----XXXXXXXXRRYAIDASIVRIM 671
I +D F N F K+ R+K+ + R+ ++A+IVRIM
Sbjct: 661 DAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIM 720
Query: 672 KSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
K+RK L H LV E +QL F P IK+RIE LI R+YL RD+ + ++Y+A
Sbjct: 721 KARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 777
>UNIPROTKB|Q17391 [details] [associations]
symbol:cul-3 "Cullin-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0035046
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K03869 OMA:ATFYGPI EMBL:U58085
EMBL:FO081768 RefSeq:NP_503151.1 ProteinModelPortal:Q17391
SMR:Q17391 IntAct:Q17391 MINT:MINT-274347 STRING:Q17391
PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 629 (226.5 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 164/565 (29%), Positives = 290/565 (51%)
Query: 8 TID---LEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPH---LVSAFV 59
TID + Q WE +++ I ++ KN GL F E Y YT + H L +
Sbjct: 21 TIDEQYVTQTWELLKRAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGERLYNGLK 75
Query: 60 NILLLVLPSIREKHDEFM-----LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LP 113
+++ + S+R + E M L + + W++H V + + Y+DR ++A+ + +
Sbjct: 76 DVIQDHMASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDRIYVAQNNHVL 135
Query: 114 PLNEVGLTCFRDLVYTELNG---KVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMG 170
P+ +GL +R + + NG ++RDA++ LI +R+ QI+ +KN D+ + +G+
Sbjct: 136 PVYNLGLDAYRTEILRQ-NGIGDRIRDALLELIKLDRKSNQINWHGIKNACDMLISLGID 194
Query: 171 QMDYYENDFETAMLKDTAAYYSRKASNWIL--EDSCPDYMLKAEECLKREKDRVSHYLHS 228
YE++FE +LK+T+ YY NW+ D+C Y+ + E + E R S YL
Sbjct: 195 SRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDAC-FYLAQVEIAMHDEASRASRYLDK 253
Query: 229 SSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVS 288
+E K+L+ + +++ + ++ ++ G +L K+EDL+R+FR+F +I +
Sbjct: 254 MTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPG 313
Query: 289 NIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQ 348
K + A L + + N+ K V FV ++++L D + + + F
Sbjct: 314 GGLKALLKAVSEYLNETGSNIVKNEDLLKNPVN------FVNELLQLKDYFSSLLTTAFA 367
Query: 349 NHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVK 408
+ F + FE F N + S E +A + D++L+ G + +SD ++ L+ V+
Sbjct: 368 DDRDFKNRFQHDFETFLN---SNRQSPEFVALYMDDMLRSG-LKCVSDAEMDNKLDNVMI 423
Query: 409 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 468
L Y+ +KD+F +++++ LA+RLL DKS +DD E+++L KLK +CG QFT K+E M D
Sbjct: 424 LFRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDK 483
Query: 469 TLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREF 528
L TSF ++ P ID+++ VLT G WP+ + + LP E+ E+F ++
Sbjct: 484 ELWLTLATSFRDWREAQPT-KMSIDISLRVLTAGVWPTVQCNPVVLPQELSVAYEMFTQY 542
Query: 529 YQTKTKHRKLTWIYSLGTCNLLGKF 553
Y K RKLT LG ++ F
Sbjct: 543 YTEKHTGRKLTINTLLGNADVKATF 567
Score = 239 (89.2 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 61/177 (34%), Positives = 91/177 (51%)
Query: 560 LIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAK--YKIL-NKEPNT 616
L V T+Q LL FN +R+S ++M +L + + ++ R L SL+ K +IL K
Sbjct: 601 LQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGK 660
Query: 617 KTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX-----XXXXXXXXRRYAIDASIVRIM 671
I +D F N F K+ R+K+ + R+ ++A+IVRIM
Sbjct: 661 DAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIM 720
Query: 672 KSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
K+RK L H LV E +QL F P IK+RIE LI R+YL RD+ + ++Y+A
Sbjct: 721 KARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 777
>WB|WBGene00000836 [details] [associations]
symbol:cul-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IMP] [GO:0008361 "regulation of cell size" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0043066 GO:GO:0008285
GO:GO:0051301 GO:GO:0016477 GO:GO:0008406 GO:GO:0007067
GO:GO:0002119 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006974
GO:GO:0008361 GO:GO:0016567 GO:GO:0040015 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0045930
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:LDEGHEN EMBL:U58083 EMBL:Z35639
PIR:T20365 RefSeq:NP_499309.1 UniGene:Cel.6661
ProteinModelPortal:Q17389 SMR:Q17389 STRING:Q17389 PaxDb:Q17389
EnsemblMetazoa:D2045.6 GeneID:176466 KEGG:cel:CELE_D2045.6
UCSC:D2045.6 CTD:176466 WormBase:D2045.6 InParanoid:Q17389
NextBio:892698 Uniprot:Q17389
Length = 780
Score = 809 (289.8 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 213/698 (30%), Positives = 357/698 (51%)
Query: 71 EKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNE-------VGLTCF 123
E E +L+ W N ++ + + F YL+R++I RR L +E + L +
Sbjct: 105 ELSGEDLLKYYTTEWENFRISSKVMDGIFAYLNRHWI-RRELDEGHENIYMVYTLALVVW 163
Query: 124 RDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---------- 173
+ ++ +L KV DA++ LI ER G I+ + V++ VE+G+ +
Sbjct: 164 KRNLFNDLKDKVIDAMLELIRSERTGSMINSRYISGVVECLVELGVDDSETDAKKDAETK 223
Query: 174 ---YYENDFETAMLKDTAAYYSRKASNWILED-SCPDYMLKAEECLKREKDRVSHYLHSS 229
Y+ FE L+ T +Y+++A+N++ + DYM+K E L +E DR YL+SS
Sbjct: 224 KLAVYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYLNSS 283
Query: 230 SEPKLLEKVQHELLSVYANQL-LEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVS 288
++ L + L+S NQL + H G LL D + +DLSRMF+L ++P GLD +
Sbjct: 284 TKTPLATCCESVLIS---NQLDFLQRHFG--GLLVDKRDDDLSRMFKLCDRVPNGLDELR 338
Query: 289 NIFKQHVTAEG-TALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCF 347
+ H+ EG AL ++A +AA++ K ++V+ ++E+H++Y + VN F
Sbjct: 339 KSLENHIAKEGHQALERVAMEAATDAK------------LYVKTLLEVHERYQSLVNRSF 386
Query: 348 QNHTLFHKSLKEAFEVFCNKGVAG---------SSSAELLATFCDNILKKGGSEKLSDEA 398
+N F +SL +A F N + SAELLA +CD +L+K S K+ DEA
Sbjct: 387 KNEPGFMQSLDKAATSFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRK--SSKMPDEA 444
Query: 399 -IEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQF 457
+EE+ K++ + YI DKD+F++FY K ++RL+ + SA+D+ E + +TKLK CG ++
Sbjct: 445 ELEELQTKIMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEY 504
Query: 458 TSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAE 517
T+++ MV D ++++ F+E ++ ++ V VL++G WP++ + + LP +
Sbjct: 505 TARLSKMVNDTQVSKDLTADFKEKKADMLGQK-SVEFNVLVLSSGSWPTFPTTPITLPQQ 563
Query: 518 MVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSD 577
+ K +E+F +FY K R+LTW+YS + + TT Q +LLFN D
Sbjct: 564 LSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQD 623
Query: 578 RLSYSEIMTQLNLSDDD----VVRLLHSLSCAKYKILNKE---PNTKTISPTDHFEFNSK 630
+ +I + + V L+ +L L KE P T T+S + N K
Sbjct: 624 SYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVSLNKAY-MNKK 682
Query: 631 FTDKMRRIKIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQL 690
+ + + R+ I A IVRIMK+RK + HQQL+ E + QL
Sbjct: 683 VRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQL 742
Query: 691 GRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
FKP + IK+ I LI ++Y+ R + +++ YLA
Sbjct: 743 SGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
Score = 48 (22.0 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 1 MTMNE--RKTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
MT +E R T D E W+ +Q G+ + +DYM LYT ++
Sbjct: 1 MTNSEPRRMTCDSEVVWKKLQDGLDVAYR------RENMAPKDYMTLYTSVY 46
>POMBASE|SPAC24H6.03 [details] [associations]
symbol:cul3 "cullin 3" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IC]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
PomBase:SPAC24H6.03 GO:GO:0005829 GO:GO:0007346 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
EMBL:AB017028 PIR:S62405 PIR:T38359 PIR:T43406 RefSeq:NP_592949.1
ProteinModelPortal:Q09760 IntAct:Q09760 STRING:Q09760
EnsemblFungi:SPAC24H6.03.1 GeneID:2542637 KEGG:spo:SPAC24H6.03
OMA:DEFRQHI OrthoDB:EOG48H0BR NextBio:20803686 Uniprot:Q09760
Length = 785
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 213/672 (31%), Positives = 341/672 (50%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLVYT---ELNGK 134
L LV W +H V ++ +S YLD+ + P+NE G+ FR++V E+ K
Sbjct: 122 LSSLVNSWKDHIVSMQMISSVLKYLDKVYSKSADKVPVNENGIYIFREVVLLNSFEIGEK 181
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD--YYENDFETAMLKDTAAYYS 192
+ ++ L+ ER+G I+R L+ + LD+ + Y+ F L T +Y
Sbjct: 182 CVETILILVYLERKGNTINRPLINDCLDMLNSLPSENKKETLYDVLFAPKFLSYTRNFYE 241
Query: 193 RKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLE 252
++S I +Y+ KAE+ + EK+R +YL + LL V+ ELLS + + LLE
Sbjct: 242 IESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIASPLLSVVEDELLSKHLDDLLE 301
Query: 253 KEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASN 312
+ +G +++ E L ++ FS++ G+ + ++V G + + A
Sbjct: 302 NQSTGFFSMIDSSNFEGLQLVYESFSRVELGVKSLKKYLAKYVAHHGKLINETTSQALEG 361
Query: 313 KKAEKR-DVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAG 371
K A R ++V+KV+ L D+ ++ SL +AF F V G
Sbjct: 362 KMAVGRLSSNATMATLWVQKVLALWDRLNTIISTTMDADRSILNSLSDAFVTF----VDG 417
Query: 372 SSSA-ELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARR 430
+ A E ++ F D+ LKK + K + +IE L+ V L +IS+KD+F ++Y+ LA+R
Sbjct: 418 YTRAPEYISLFIDDNLKKD-ARKAIEGSIEATLQNSVTLFRFISEKDVFEKYYKTHLAKR 476
Query: 431 LLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNP--NA 488
LL ++S + D E ++++LKQ+ G FT K+EGM D+ L++E +EY N+ +A
Sbjct: 477 LLNNRSISSDAELGMISRLKQEAGNVFTQKLEGMFNDMNLSQE---LLQEYKHNSALQSA 533
Query: 489 NPGIDLTVTVLTTGFWP---SYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLG 545
P +DL V++L + FWP S N P ++ ++ F +FY +K RKL W S+G
Sbjct: 534 KPALDLNVSILASTFWPIDLSPHKIKCNFPKVLLAQIDQFTDFYLSKHTGRKLLWYPSMG 593
Query: 546 TCNLLGKFESRTTELIVTTYQASALLLFNS---SDRLSYSEIMTQLNLSDDDVVRLLHSL 602
+ ++ F+ R +L V+T + LLLF + L + EI+ + N+ D+ R L SL
Sbjct: 594 SADVRVNFKDRKYDLNVSTIASVILLLFQDLKENQCLIFEEILEKTNIEVGDLKRNLQSL 653
Query: 603 SCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIP------LPPXXXXXXXXXXXX 656
+CAKYKIL K+P + ++ D F FN F + RIKI +
Sbjct: 654 ACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVD 713
Query: 657 XXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLER 716
R++ DA IVR+MK RKV H QL+ E QL F P IK+RIE LI R+YL+R
Sbjct: 714 ESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQR 773
Query: 717 DKSNPNMFRYLA 728
N ++ YLA
Sbjct: 774 QADNGRIYEYLA 785
>UNIPROTKB|G3N0Q3 [details] [associations]
symbol:G3N0Q3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:NDYHERS EMBL:DAAA02010429
PRIDE:G3N0Q3 Ensembl:ENSBTAT00000063692 NextBio:20878225
Uniprot:G3N0Q3
Length = 767
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 216/705 (30%), Positives = 361/705 (51%)
Query: 55 VSAFVNILLLVLPSIREK-HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR---- 109
+ F+ L LP E D +L+ ++W +++ + L+ L+++ +
Sbjct: 84 IKEFLKNHLTNLPKDGEDLMDIGILKFYTQQWEDYQFSSKVLNGICARLNKHLLNSTNNE 143
Query: 110 -RSLPPLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIG 168
++ + + + +RD ++ LN +V +AV+ LI++ER GE I+ L+ + ++E+G
Sbjct: 144 GHNVCEIYSLAMVTWRDCLFRPLNKQVTNAVLKLIEKERNGESINTRLISGAIQSYLELG 203
Query: 169 MGQ---------MDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREK 219
+ + + Y+ FE+ L DT YY+RK++ + ++ +YM K E L E+
Sbjct: 204 VNEDNQFEESPMLTVYKEAFESQFLADTERYYTRKSTELLQQNPVTEYMKKVEALLLEER 263
Query: 220 DRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSK 279
R YLH SS+ KL K + L+ + L + + LL +K EDL RM+RL +
Sbjct: 264 RRARVYLHQSSKGKLARKCRQVLVEKHLEIFLTEFQN----LLNANKSEDLGRMYRLIYR 319
Query: 280 IPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKY 339
I GL I + H+ +G + ++ +AA N +++V V+ +H KY
Sbjct: 320 IKNGLGEFKKILETHIHNQGLSAIEECGEAALN-----------DPRMYVETVLNIHKKY 368
Query: 340 LAYVNDCFQNHTLFHKSLKEAFEVFCNKGV------AGSSSAELLATFCDNILKKGGSEK 393
A V F+NH F +L +A F N + S S ELLA +CD++LKK S K
Sbjct: 369 NALVISAFRNHADFVAALDKACSGFINNNAVTKMAQSSSKSPELLAQYCDSLLKK--SSK 426
Query: 394 LSDEA-IEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQ 452
+EA +E+ L V+ + Y+ DKD+ +FY K LA+RL+ SA+DD E S+++KLKQ
Sbjct: 427 NPEEAELEDTLNHVMTVFKYMDDKDVVQKFYTKMLAKRLVHQNSASDDAEASMVSKLKQA 486
Query: 453 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDL 512
CG ++TSK++ M D+ +++ F+++L ++ + +D ++ VL+ G+WP +S +
Sbjct: 487 CGFEYTSKLQRMFQDIGVSKALNAQFKKHLMDSEPLD--LDFSIHVLSYGWWPFEESCTV 544
Query: 513 NLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLL 572
LP+E+ C F FY + RKL+W Y L L+ + L V+T+Q + LL
Sbjct: 545 LLPSELEPCYRRFTAFYASCYSDRKLSWAYQLSEGELVTNYFKNNYTLRVSTFQMAILLQ 604
Query: 573 FNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKIL---NKEPNTKTIS--PTDHFEF 627
+N+ D + ++M + D V ++L L K+K+L +K N + P +
Sbjct: 605 YNTEDAYTIQQLMDSTQIKMDIVAQVLQIL--LKFKLLVLEDKSANVDEVELKPDTLIKL 662
Query: 628 NSKFTDKMRRIKIPLP----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLV 683
+ + K R+ I LP R+ I A+IVRIMK RKV+ HQQL+
Sbjct: 663 HFGYKSKKLRVNISLPMKIEQKREQETMYKNIEEDRKLLIQAAIVRIMKMRKVVKHQQLL 722
Query: 684 LECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
E QL +FKP IKK I+ LI ++YLER + + YLA
Sbjct: 723 GEVATQLSSVFKPQISVIKKCIDILIEKEYLERVGDEKDTYSYLA 767
>UNIPROTKB|E1BFD5 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045750 "positive regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:DAAA02067221 EMBL:DAAA02067222 IPI:IPI00707913
Ensembl:ENSBTAT00000024713 Uniprot:E1BFD5
Length = 965
Score = 784 (281.0 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 198/554 (35%), Positives = 294/554 (53%)
Query: 182 AMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHE 241
+ML D Y + LE++ Y + ++ L +E++ V YLH + K LE+
Sbjct: 425 SMLSDLQIYQDSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVN--KRLEEEADR 479
Query: 242 LLSVYANQLLEKEHSGC--HALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
L++ Y +Q +K LL + L + R + +S +++ G
Sbjct: 480 LIT-YLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENR-IQDLSLLYQLFSRVRG 537
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLK 358
V L + K V+ + ++ V+++++ DK ++ CF + F ++K
Sbjct: 538 GVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMK 597
Query: 359 EAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDL 418
EAFE F NK + AEL+A + D+ L+ G E +DE +E+ML+K++ + +I KD+
Sbjct: 598 EAFETFINK--RPNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKDV 654
Query: 419 FAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 478
F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 655 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF 714
Query: 479 EEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKL 538
++Y+ N N I+LTV +LT G+WP+Y +++LP EMVK E+F+ FY K RKL
Sbjct: 715 KQYMQNQ-NVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 773
Query: 539 TWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRL 598
W +LG C L +F+ EL V+ +Q LL+FN + S EI + D ++ R
Sbjct: 774 QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRT 833
Query: 599 LHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXX 654
L SL+C K ++L K P K I D F N F K+ RIKI
Sbjct: 834 LQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTER 893
Query: 655 XXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYL 714
R+Y IDA+IVRIMK RK L H LV E QL KP +KKRIE LI RDY+
Sbjct: 894 VFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYM 951
Query: 715 ERDKSNPNMFRYLA 728
ERDK NPN + Y+A
Sbjct: 952 ERDKENPNQYNYIA 965
Score = 289 (106.8 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 80/320 (25%), Positives = 170/320 (53%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE--LNGK 134
L+++ + W NH + + F +LDR ++ + S LP + ++GL FR + ++ + K
Sbjct: 338 LKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNK 397
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI++ER GE IDR+LL+++L + + + Y++ FE L++T Y+ +
Sbjct: 398 TIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRLYAAE 452
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE 254
+ E P+Y+ + L+ E DR+ YL +++ L+ V+ +LL + +L+K
Sbjct: 453 GQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQK- 511
Query: 255 HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKK 314
G + LL +++++DLS +++LFS++ G+ + + +++ A G+ +V E K
Sbjct: 512 --GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPE----KDK 565
Query: 315 AEKRDVVGLQEQV-FVRKVIEL-HDKYLAYVNDCFQNHTLFHKSLKEAFEVFC----NKG 368
++++ +++V + + L ++K++ + + F+ T +K + E+ +K
Sbjct: 566 TMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFE--TFINKRPNKPAELIAKYVDSKL 623
Query: 369 VAGSSSA--ELLATFCDNIL 386
AG+ A E L D I+
Sbjct: 624 RAGNKEATDEELEKMLDKIM 643
Score = 37 (18.1 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 24 KLKNILEGLPEPQF 37
+L+ LEG P P F
Sbjct: 26 ELRRCLEGPPPPSF 39
>FB|FBgn0015509 [details] [associations]
symbol:lin19 "lin-19-like" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 HOGENOM:HOG000021491 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 KO:K03347 EMBL:L41642
EMBL:AF136343 EMBL:BT010290 RefSeq:NP_523655.1 RefSeq:NP_724621.1
RefSeq:NP_724622.1 RefSeq:NP_724623.1 UniGene:Dm.7926
ProteinModelPortal:Q24311 SMR:Q24311 DIP:DIP-19461N IntAct:Q24311
MINT:MINT-989395 STRING:Q24311 PaxDb:Q24311
EnsemblMetazoa:FBtr0088845 EnsemblMetazoa:FBtr0088846
EnsemblMetazoa:FBtr0088847 EnsemblMetazoa:FBtr0088848 GeneID:35742
KEGG:dme:Dmel_CG1877 UCSC:CG1877-RA CTD:35742 FlyBase:FBgn0015509
InParanoid:Q24311 OMA:NECIAES OrthoDB:EOG42280P PhylomeDB:Q24311
GenomeRNAi:35742 NextBio:794991 Bgee:Q24311 GermOnline:CG1877
Uniprot:Q24311
Length = 774
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 217/719 (30%), Positives = 370/719 (51%)
Query: 45 LYTYLFQPHLVSAFVNILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDR 104
LY L Q + ++++ LL +I +E +L K+W +++ L +YL+R
Sbjct: 78 LYDRLEQ--FLKSYLSELLTKFKAI--SGEEVLLSRYTKQWKSYQFSSTVLDGICNYLNR 133
Query: 105 YFIAR------RSLPPLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLK 158
++ R + + + + L ++ ++ LN V AV+ I++ER+G+ I+R+L++
Sbjct: 134 NWVKRECEEGQKGIYKIYRLALVAWKGHLFQVLNEPVTKAVLKSIEEERQGKLINRSLVR 193
Query: 159 NVLDIFVEIGMGQMD---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYML 209
+V++ +VE+ + D Y+ +FE + DT+A+Y +++ ++ ++ +Y+
Sbjct: 194 DVIECYVELSFNEEDTDAEQQKLSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYLK 253
Query: 210 KAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE----HSGCHALLRDD 265
E L+ E RV + + L E L S L+EK H+ LL D
Sbjct: 254 HVENRLEEETQRVRGFNSKNGLSYLHETTADVLKSTCEEVLIEKHLKIFHTEFQNLLNAD 313
Query: 266 KVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGT-ALVKLAE-DAASNKKAEKRDVVGL 323
+ +DL RM+ L + + L + +I + H+ +GT A+ K DAA++ K
Sbjct: 314 RNDDLKRMYSLVALSSKNLTDLKSILENHILHQGTEAIAKCCTTDAANDPKT-------- 365
Query: 324 QEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGV-----AGSSSAELL 378
+V+ ++++H KY A V F N F +L +A F N V + S S ELL
Sbjct: 366 ----YVQTILDVHKKYNALVLTAFNNDNGFVAALDKACGKFINSNVVTIANSASKSPELL 421
Query: 379 ATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSAN 438
A +CD +LKK S+ D+ +E+ L +V+ + YI DKD+F ++Y K LA+RL+ SA+
Sbjct: 422 AKYCDLLLKKS-SKNPEDKELEDNLNQVMVVFKYIEDKDVFQKYYSKMLAKRLVNHTSAS 480
Query: 439 DDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTV 498
DD E +++KLKQ CG ++T K++ M D+ ++++ + F++YL+ N ID + V
Sbjct: 481 DDAEAMMISKLKQTCGYEYTVKLQRMFQDIGVSKDLNSYFKQYLAEK-NLTMEIDFGIEV 539
Query: 499 LTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLL---GKFES 555
L++G WP S + LP+E+ + V F EFY + RKL W+Y + L+ + S
Sbjct: 540 LSSGSWPFQLSNNFLLPSELERSVRQFNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNS 599
Query: 556 RTTELIVTTYQASALLLFNSSDRLSYS--EIMTQLNLSDDDVVRLLHSLSCAKYKILNKE 613
T L +T+Q S LL FN D+LS++ ++ ++++++L L K K+L
Sbjct: 600 STYTLQASTFQMSVLLQFN--DQLSFTVQQLQDNTQTQQENLIQVLQIL--LKAKVLTSS 655
Query: 614 PNTKTISPTDHFEFNSKFTDKMRRIKI--PLPPXXXXXXXXXXXXXX--RRYAIDASIVR 669
N +++P E + +K RRI I PL R+ I A+IVR
Sbjct: 656 DNENSLTPESTVELFLDYKNKKRRININQPLKTELKVEQETVHKHIEEDRKLLIQAAIVR 715
Query: 670 IMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
IMK RK L H L+ E + QL FKP IKK I+ LI ++YLER + + + + YLA
Sbjct: 716 IMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDILIEKEYLERMEGHKDTYSYLA 774
>DICTYBASE|DDB_G0284903 [details] [associations]
symbol:culC "cullin C" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0284903 GO:GO:0005634 GenomeReviews:CM000153_GR
EMBL:AAFI02000073 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HSSP:Q9JLV5
KO:K03869 RefSeq:XP_639922.1 ProteinModelPortal:Q54NZ5 SMR:Q54NZ5
STRING:Q54NZ5 EnsemblProtists:DDB0266742 GeneID:8624834
KEGG:ddi:DDB_G0284903 OMA:YRTESEN Uniprot:Q54NZ5
Length = 769
Score = 602 (217.0 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 178/572 (31%), Positives = 298/572 (52%)
Query: 62 LLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLT 121
L V ++ E DE L EL W NHK + + Y+DR ++ + +L + ++GL
Sbjct: 81 LKAVAKTVSESIDEKFLLELNSSWINHKTSMLMIRDILMYMDRNYVKQNNLSSVFDLGLY 140
Query: 122 CFRDLVYTELNGKVRDAVI-TLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFE 180
FRD V ++D ++ TL+ ++ E+ + + ++ V++ +D N +
Sbjct: 141 LFRDNVAH--CSTIKDRLLNTLLSMVQK-EREGEVIDRILIKNIVQM---LIDLGVNS-K 193
Query: 181 TAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQH 240
++D K S+ S +++ C K +V L LE+V H
Sbjct: 194 NVYIEDFEKPLLLKTSSHYQAQS--QTLIQTCSCPDYMK-KVEICLKEE-----LERVSH 245
Query: 241 ELLSVYANQL---LEKEHSGCHA-LLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVT 296
L S +L EK+ H L D + L M + KI L + N+F +
Sbjct: 246 YLDSSSEPKLKEVCEKQLISNHMRTLIDMENSGLISMLK-DDKI-EDLKRMYNLFSR--V 301
Query: 297 AEGTALVKLAEDAASNKKAEKRDVVGLQEQV-----FVRKVIELHDKYLAYVNDCFQNHT 351
++G L+K + +S K R +V +E+ + + +++L DKY + + N
Sbjct: 302 SDGLNLMK--DVISSYVKEIGRGIVMDEEKTKESGTYFQSLLDLKDKYDNLLQNALYNDK 359
Query: 352 LFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLA 411
F S+++AFE F N S E ++ F D LKKG + +S+E ++ +L+K++ L
Sbjct: 360 QFIHSIQQAFEYFIN---LNPKSPEYISLFIDEKLKKG-LKGVSEEEVDIILDKILMLFR 415
Query: 412 YISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA 471
I +KD+F ++Y++ LA+RLL +S +DD ER+++ KLK +CG QFTSK+EGM TD+ L+
Sbjct: 416 LIQEKDVFEKYYKQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLEGMFTDMRLS 475
Query: 472 RENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQT 531
++ + F+ Y+ N A P IDL V VLTTGFWP+ + + NLP E++ C E F+ +Y +
Sbjct: 476 QDTMSGFKTYIQNLKKALP-IDLNVHVLTTGFWPTQNTANCNLPREILLCCEAFKSYYLS 534
Query: 532 KTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLS 591
R L W ++GT + F S++ EL V++YQ LLLFN +L++ EI Q +
Sbjct: 535 NHNGRLLLWQTNMGTAEIKANFPSKSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIP 594
Query: 592 DDDVVRLLHSLSCAKYKILNKE-PNTKTISPT 622
D+ R L +L+ K KIL++E P+T + + T
Sbjct: 595 TIDLKRNLLALTNPKNKILDRELPSTTSSTTT 626
Score = 206 (77.6 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 51/132 (38%), Positives = 72/132 (54%)
Query: 601 SLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXX----XXXXXXXX 656
S S + I P+ K+I +D F FN+KF K+ R+K+
Sbjct: 639 SPSSSSSSISTPTPS-KSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEEKETRDKVD 697
Query: 657 XXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLER 716
R++ I+ASIVRIMK+RK L H LV E ++QL F P+ +KKRIE LI R+YLER
Sbjct: 698 EDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLER 757
Query: 717 DKSNPNMFRYLA 728
K + ++ Y+A
Sbjct: 758 SKQDRKIYNYMA 769
Score = 54 (24.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 21 GITKLKNILE-G-LPEPQFSSEDYMMLYTYLFQPHLVSA----FVNILLLVLPSIREKHD 74
G + KN+ G L +P F + +L T + Q H +A F + + +KH
Sbjct: 7 GKIQFKNLQSHGVLADPDFPKRTWKLLKTAMRQIHQQNASNLSFEELYRNGYNMVLQKHG 66
Query: 75 EFMLRELVKRWSNH-KVMVRWLSRFFHYLDRYFIARRSLPPLN-EVGLTCFRD-LVYTEL 131
+ + L K H K + + +S +D F+ + +N + + RD L+Y +
Sbjct: 67 DLLYNNLKKMVDKHLKAVAKTVSES---IDEKFLLELNSSWINHKTSMLMIRDILMYMDR 123
Query: 132 N 132
N
Sbjct: 124 N 124
>UNIPROTKB|F1P2U1 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0051246 "regulation of
protein metabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:AADN02017929 EMBL:AADN02017930
EMBL:AADN02017931 IPI:IPI00587191 Ensembl:ENSGALT00000027171
Uniprot:F1P2U1
Length = 741
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 197/556 (35%), Positives = 297/556 (53%)
Query: 182 AMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHE 241
+ML D Y ++ E +C Y + + L +E++ V YLH S K LE+
Sbjct: 201 SMLSDLQVYKESFEQRFLEETNCL-YAAEGQR-LMQERE-VPEYLHHVS--KRLEEEGDR 255
Query: 242 LLSVYANQLLEKEHSGC--HALLRDDKVEDLSR-MFRLFSKIPRGLDPVSNIFKQHVTAE 298
+++ Y + +K C LL + L + + L + + ++ ++ +
Sbjct: 256 VIT-YLDHSTQKPLIACVEKQLLGEHLTAILQKGLDNLLDE--NRISDLTQTYQLFSRVK 312
Query: 299 GTALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSL 357
G + L + K VV + ++ V+++++ DK + CFQ + F +
Sbjct: 313 GGQQILLQHWSEYIKNFGTTIVVNPEKDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLM 372
Query: 358 KEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKD 417
KE+FE F NK + AEL+A + D+ L+ G E +DE +E +L+K++ + +I KD
Sbjct: 373 KESFETFINK--RPNKPAELIAKYVDSKLRAGNKEA-TDEELERILDKIMIIFRFIHGKD 429
Query: 418 LFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 477
+F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++
Sbjct: 430 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQ 489
Query: 478 FEEYLSNNPNANPG-IDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHR 536
F++Y+ N ++PG IDLTV +LT G+WP+Y +++L +EM+K EVF+ FY K R
Sbjct: 490 FKQYMQNQ--SDPGNIDLTVNILTMGYWPTYTPMEVHLNSEMIKLQEVFKTFYLGKHSGR 547
Query: 537 KLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVV 596
KL W +LG L +F+ E V+ +Q LL+FN D S+ EI + D ++
Sbjct: 548 KLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDEFSFEEIKMATGIEDSELR 607
Query: 597 RLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXX 652
R L SL+C K ++L K P K + D F FN F K+ RIKI
Sbjct: 608 RTLQSLACGKARVLIKNPKGKDVEDGDKFIFNGDFKHKLFRIKINQIQMKETVEEQVSTT 667
Query: 653 XXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRD 712
R+Y IDA+IVRIMK RK LGH LV E QL KP +KKRIE LI RD
Sbjct: 668 ERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRD 725
Query: 713 YLERDKSNPNMFRYLA 728
Y+ERDK NPN + Y+A
Sbjct: 726 YMERDKDNPNQYHYVA 741
Score = 286 (105.7 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 80/320 (25%), Positives = 165/320 (51%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE--LNGK 134
L+++ K W +H + + F +LDR ++ + S LP + ++GL FR+ V ++ + K
Sbjct: 114 LKKINKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHVISDKQVQNK 173
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI++ER GE +DR+LL+++L + + + Y+ FE L++T Y+ +
Sbjct: 174 TIDGILLLIERERSGEAVDRSLLRSLLSM-----LSDLQVYKESFEQRFLEETNCLYAAE 228
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE 254
+ E P+Y+ + L+ E DRV YL S++ L+ V+ +LL + +L+K
Sbjct: 229 GQRLMQEREVPEYLHHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAILQK- 287
Query: 255 HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKK 314
G LL ++++ DL++ ++LFS++ G + + +++ GT +V E K
Sbjct: 288 --GLDNLLDENRISDLTQTYQLFSRVKGGQQILLQHWSEYIKNFGTTIVVNPE----KDK 341
Query: 315 AEKRDVVGLQEQV--FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFC----NKG 368
++++ +++V + + ++K++ + + F+ T +K + E+ +K
Sbjct: 342 DMVQELLDFKDKVDHIIEVCFQKNEKFINLMKESFE--TFINKRPNKPAELIAKYVDSKL 399
Query: 369 VAGSSSA--ELLATFCDNIL 386
AG+ A E L D I+
Sbjct: 400 RAGNKEATDEELERILDKIM 419
>UNIPROTKB|Q5T2B7 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176713 HOVERGEN:HBG106177 EMBL:AL392046
UniGene:Hs.82919 HGNC:HGNC:2552 ChiTaRS:CUL2 IPI:IPI00647073
SMR:Q5T2B7 Ensembl:ENST00000374754 Uniprot:Q5T2B7
Length = 688
Score = 768 (275.4 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 191/632 (30%), Positives = 317/632 (50%)
Query: 114 PLNEVG---LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMG 170
PL E+G L +R L+ L + ++ I +R GE ++ ++ V++ FV +
Sbjct: 78 PLMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQY 137
Query: 171 Q----MDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL 226
+ + +Y+ FE+ L +T YY ++ASN + E +C YM K LK E+ R YL
Sbjct: 138 KKKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYL 197
Query: 227 HSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDP 286
H SS K++ + Q +++ + Q L H+ CH ++R +K D++ M+ L + GL
Sbjct: 198 HPSSYTKVIHECQQRMVADHL-QFL---HAECHNIIRQEKKNDMANMYVLLRAVSTGLPH 253
Query: 287 VSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDC 346
+ + H+ EG A SN E + FV V+E+H K++ +N
Sbjct: 254 MIQELQNHIHDEGLR-------ATSNLTQENMPTL------FVESVLEVHGKFVQLINTV 300
Query: 347 FQNHTLFHKSLKEAFEVFCNKGVAGS--SSAELLATFCDNILKKGGSEKLSDEAIEEMLE 404
F +L +A N S + ELLA +CDN+LKK ++ +++ +E+ L
Sbjct: 301 LNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKS-AKGMTENEVEDRLT 359
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM 464
+ + YI DKD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M
Sbjct: 360 SFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRM 419
Query: 465 VTDLTLARENQTSFEEYLSNNPNA-NPGIDLTVTVLTTGFWPSYK--SFDLNLPAEMVKC 521
TD++++ + F ++ N + GI + VL G WP + S +P E+ K
Sbjct: 420 YTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKS 479
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSY 581
V++F FY RKLTW++ L T + + + +VTTYQ + LL FN+S+ +SY
Sbjct: 480 VQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSY 539
Query: 582 SEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIP 641
E+ +++ ++ + + SL K++N + + I F N F+ K + KI
Sbjct: 540 KELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKIT 597
Query: 642 LP-----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKP 696
P + Y + A+IVRIMK+RKVL H L+ E + Q F P
Sbjct: 598 TSMQKDTPQEMEQTRSAVDEDRKMY-LQAAIVRIMKARKVLRHNALIQEVISQSRARFNP 656
Query: 697 DFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
IKK IE LI + Y+ER +++ + + Y+A
Sbjct: 657 SISMIKKCIEVLIDKQYIERSQASADEYSYVA 688
Score = 38 (18.4 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 6/31 (19%), Positives = 14/31 (45%)
Query: 82 VKRWSNHKVMVRWLSRFFHYLDRYFIARRSL 112
++ W + ++ + YL+ FI + L
Sbjct: 31 IRYWEEYSKGADYMDCLYRYLNTQFIKKNKL 61
>MGI|MGI:1919834 [details] [associations]
symbol:Cul4b "cullin 4B" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1919834
GO:GO:0005634 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0007049 GO:GO:0006511 GO:GO:0045732
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750 EMBL:CH466570
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0 CTD:8450
GO:GO:0031465 EMBL:AY330868 EMBL:AK012410 EMBL:AK032701
EMBL:AK160998 EMBL:AL513356 EMBL:BC004026 EMBL:BC010347
EMBL:AB093259 IPI:IPI00224689 IPI:IPI00473987 RefSeq:NP_001103612.1
RefSeq:NP_082564.3 UniGene:Mm.327675 ProteinModelPortal:A2A432
SMR:A2A432 IntAct:A2A432 STRING:A2A432 PhosphoSite:A2A432
PaxDb:A2A432 PRIDE:A2A432 Ensembl:ENSMUST00000050083
Ensembl:ENSMUST00000115118 GeneID:72584 KEGG:mmu:72584
UCSC:uc009taa.2 InParanoid:Q91YZ7 ChiTaRS:CUL4B NextBio:336543
Bgee:A2A432 Genevestigator:A2A432 Uniprot:A2A432
Length = 970
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 198/554 (35%), Positives = 295/554 (53%)
Query: 182 AMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHE 241
+ML D Y + L+++ Y + ++ L +E++ V YLH + K LE+
Sbjct: 430 SMLSDLQIYQDSFEQQF-LQETNRLYAAEGQK-LMQERE-VPEYLHHVN--KRLEEEADR 484
Query: 242 LLSVYANQLLEKE--HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
L++ Y +Q +K S LL + L + R + +S +++ G
Sbjct: 485 LIT-YLDQTTQKSLIASVEKQLLGEHLTAILQKGLNSLLDENR-IQDLSLLYQLFSRVRG 542
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLK 358
V L + K V+ + ++ V+++++ DK ++ CF + F ++K
Sbjct: 543 GVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDTCFLKNEKFINAMK 602
Query: 359 EAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDL 418
EAFE F NK + AEL+A + D+ L+ G E +DE +E+ML+K++ + +I KD+
Sbjct: 603 EAFETFINK--RPNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKDV 659
Query: 419 FAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 478
F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 660 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF 719
Query: 479 EEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKL 538
++Y+ N N I+LTV +LT G+WP+Y +++LP EMVK E+F+ FY K RKL
Sbjct: 720 KQYMQNQ-NVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 778
Query: 539 TWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRL 598
W +LG C L +F+ EL V+ +Q LL+FN + S EI + D ++ R
Sbjct: 779 QWQSTLGHCVLKAEFKEGKKELQVSLFQTMVLLMFNEGEEFSLEEIKHATGIEDGELRRT 838
Query: 599 LHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXX 654
L SL+C K ++L K P K I D F N F K+ RIKI
Sbjct: 839 LQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTER 898
Query: 655 XXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYL 714
R+Y IDA+IVRIMK RK L H LV E QL KP +KKRIE LI RDY+
Sbjct: 899 VFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYM 956
Query: 715 ERDKSNPNMFRYLA 728
ERDK NPN + Y+A
Sbjct: 957 ERDKENPNQYNYIA 970
Score = 291 (107.5 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 79/320 (24%), Positives = 169/320 (52%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE--LNGK 134
L+++ + W NH + + F +LDR ++ + S LP + ++GL FR + ++ + K
Sbjct: 343 LKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQTK 402
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI++ER GE IDR+LL+++L + + + Y++ FE L++T Y+ +
Sbjct: 403 TIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQQFLQETNRLYAAE 457
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE 254
+ E P+Y+ + L+ E DR+ YL +++ L+ V+ +LL + +L+K
Sbjct: 458 GQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIASVEKQLLGEHLTAILQK- 516
Query: 255 HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKK 314
G ++LL +++++DLS +++LFS++ G+ + + +++ A G+ +V E K
Sbjct: 517 --GLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPE----KDK 570
Query: 315 AEKRDVVGLQEQV--FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFC----NKG 368
++++ +++V + ++K++ + + F+ T +K + E+ +K
Sbjct: 571 TMVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFE--TFINKRPNKPAELIAKYVDSKL 628
Query: 369 VAGSSSA--ELLATFCDNIL 386
AG+ A E L D I+
Sbjct: 629 RAGNKEATDEELEKMLDKIM 648
>UNIPROTKB|E2RMN1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF EMBL:AAEX03026836
Ensembl:ENSCAFT00000029435 Uniprot:E2RMN1
Length = 982
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 198/554 (35%), Positives = 294/554 (53%)
Query: 182 AMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHE 241
+ML D Y + LE++ Y + ++ L +E++ V YLH + K LE+
Sbjct: 442 SMLSDLQIYQDSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVN--KRLEEEADR 496
Query: 242 LLSVYANQLLEKEHSGC--HALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
L++ Y +Q +K LL + L + R + +S +++ G
Sbjct: 497 LIT-YLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENR-IQDLSLLYQLFSRVRG 554
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLK 358
V L + K V+ + ++ V+++++ DK ++ CF + F ++K
Sbjct: 555 GVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMK 614
Query: 359 EAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDL 418
EAFE F NK + AEL+A + D+ L+ G E +DE +E+ML+K++ + +I KD+
Sbjct: 615 EAFETFINK--RPNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKDV 671
Query: 419 FAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 478
F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 672 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF 731
Query: 479 EEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKL 538
++Y+ N N I+LTV +LT G+WP+Y +++LP EMVK E+F+ FY K RKL
Sbjct: 732 KQYMQNQ-NVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 790
Query: 539 TWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRL 598
W +LG C L +F+ EL V+ +Q LL+FN + S EI + D ++ R
Sbjct: 791 QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRT 850
Query: 599 LHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXX 654
L SL+C K ++L K P K I D F N F K+ RIKI
Sbjct: 851 LQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTER 910
Query: 655 XXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYL 714
R+Y IDA+IVRIMK RK L H LV E QL KP +KKRIE LI RDY+
Sbjct: 911 VFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYM 968
Query: 715 ERDKSNPNMFRYLA 728
ERDK NPN + Y+A
Sbjct: 969 ERDKENPNQYNYIA 982
Score = 292 (107.8 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 81/320 (25%), Positives = 170/320 (53%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE--LNGK 134
L+++ K W NH + + F +LDR ++ + S LP + ++GL FR + ++ + K
Sbjct: 355 LKKIDKCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNK 414
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI++ER GE IDR+LL+++L + + + Y++ FE L++T Y+ +
Sbjct: 415 TIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRLYAAE 469
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE 254
+ E P+Y+ + L+ E DR+ YL +++ L+ V+ +LL + +L+K
Sbjct: 470 GQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQK- 528
Query: 255 HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKK 314
G + LL +++++DLS +++LFS++ G+ + + +++ A G+ +V E K
Sbjct: 529 --GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPE----KDK 582
Query: 315 AEKRDVVGLQEQV-FVRKVIEL-HDKYLAYVNDCFQNHTLFHKSLKEAFEVFC----NKG 368
++++ +++V + + L ++K++ + + F+ T +K + E+ +K
Sbjct: 583 TMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFE--TFINKRPNKPAELIAKYVDSKL 640
Query: 369 VAGSSSA--ELLATFCDNIL 386
AG+ A E L D I+
Sbjct: 641 RAGNKEATDEELEKMLDKIM 660
>UNIPROTKB|K4DI93 [details] [associations]
symbol:CUL4B "Cullin 4B, isoform CRA_e" species:9606 "Homo
sapiens" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 EMBL:CH471107
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AC002476 EMBL:AL451005 HGNC:HGNC:2555 Ensembl:ENST00000336592
Uniprot:K4DI93
Length = 900
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 198/554 (35%), Positives = 294/554 (53%)
Query: 182 AMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHE 241
+ML D Y + LE++ Y + ++ L +E++ V YLH + K LE+
Sbjct: 360 SMLSDLQIYQDSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVN--KRLEEEADR 414
Query: 242 LLSVYANQLLEKEHSGC--HALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
L++ Y +Q +K LL + L + R + +S +++ G
Sbjct: 415 LIT-YLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENR-IQDLSLLYQLFSRVRG 472
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLK 358
V L + K V+ + ++ V+++++ DK ++ CF + F ++K
Sbjct: 473 GVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMK 532
Query: 359 EAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDL 418
EAFE F NK + AEL+A + D+ L+ G E +DE +E+ML+K++ + +I KD+
Sbjct: 533 EAFETFINK--RPNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKDV 589
Query: 419 FAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 478
F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 590 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF 649
Query: 479 EEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKL 538
++Y+ N N I+LTV +LT G+WP+Y +++LP EMVK E+F+ FY K RKL
Sbjct: 650 KQYMQNQ-NVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 708
Query: 539 TWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRL 598
W +LG C L +F+ EL V+ +Q LL+FN + S EI + D ++ R
Sbjct: 709 QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRT 768
Query: 599 LHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXX 654
L SL+C K ++L K P K I D F N F K+ RIKI
Sbjct: 769 LQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTER 828
Query: 655 XXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYL 714
R+Y IDA+IVRIMK RK L H LV E QL KP +KKRIE LI RDY+
Sbjct: 829 VFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYM 886
Query: 715 ERDKSNPNMFRYLA 728
ERDK NPN + Y+A
Sbjct: 887 ERDKENPNQYNYIA 900
Score = 289 (106.8 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 80/320 (25%), Positives = 170/320 (53%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE--LNGK 134
L+++ + W NH + + F +LDR ++ + S LP + ++GL FR + ++ + K
Sbjct: 273 LKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNK 332
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI++ER GE IDR+LL+++L + + + Y++ FE L++T Y+ +
Sbjct: 333 TIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRLYAAE 387
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE 254
+ E P+Y+ + L+ E DR+ YL +++ L+ V+ +LL + +L+K
Sbjct: 388 GQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQK- 446
Query: 255 HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKK 314
G + LL +++++DLS +++LFS++ G+ + + +++ A G+ +V E K
Sbjct: 447 --GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPE----KDK 500
Query: 315 AEKRDVVGLQEQV-FVRKVIEL-HDKYLAYVNDCFQNHTLFHKSLKEAFEVFC----NKG 368
++++ +++V + + L ++K++ + + F+ T +K + E+ +K
Sbjct: 501 TMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFE--TFINKRPNKPAELIAKYVDSKL 558
Query: 369 VAGSSSA--ELLATFCDNIL 386
AG+ A E L D I+
Sbjct: 559 RAGNKEATDEELEKMLDKIM 578
>UNIPROTKB|Q13620 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007049
"cell cycle" evidence=NAS] [GO:0031465 "Cul4B-RING ubiquitin ligase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0007049
GO:GO:0006511 EMBL:CH471107 GO:GO:0045732 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
PDB:4A0C PDBsum:4A0C KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0
EMBL:AY365125 EMBL:AF212995 EMBL:AK123688 EMBL:AK299081
EMBL:AK315037 EMBL:BX537787 EMBL:AC002476 EMBL:AL451005
EMBL:BC036216 EMBL:AB014595 EMBL:U58091 IPI:IPI00179057
IPI:IPI00480142 IPI:IPI00965290 RefSeq:NP_001073341.1
RefSeq:NP_003579.3 UniGene:Hs.102914 PDB:2DO7 PDB:4A0L PDB:4A64
PDBsum:2DO7 PDBsum:4A0L PDBsum:4A64 ProteinModelPortal:Q13620
SMR:Q13620 DIP:DIP-31609N IntAct:Q13620 STRING:Q13620
PhosphoSite:Q13620 DMDM:296439468 PaxDb:Q13620 PRIDE:Q13620
DNASU:8450 Ensembl:ENST00000371322 Ensembl:ENST00000404115
GeneID:8450 KEGG:hsa:8450 UCSC:uc004esv.3 UCSC:uc004esw.3 CTD:8450
GeneCards:GC0XM119658 H-InvDB:HIX0017025 HGNC:HGNC:2555
HPA:CAB017786 HPA:HPA011880 MIM:300304 MIM:300354
neXtProt:NX_Q13620 Orphanet:85293 PharmGKB:PA27051 OMA:FEDSLDF
EvolutionaryTrace:Q13620 GenomeRNAi:8450 NextBio:31618
PMAP-CutDB:Q13620 ArrayExpress:Q13620 Bgee:Q13620 CleanEx:HS_CUL4B
Genevestigator:Q13620 GermOnline:ENSG00000158290 GO:GO:0031465
Uniprot:Q13620
Length = 913
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 198/554 (35%), Positives = 294/554 (53%)
Query: 182 AMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHE 241
+ML D Y + LE++ Y + ++ L +E++ V YLH + K LE+
Sbjct: 373 SMLSDLQIYQDSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVN--KRLEEEADR 427
Query: 242 LLSVYANQLLEKEHSGC--HALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
L++ Y +Q +K LL + L + R + +S +++ G
Sbjct: 428 LIT-YLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENR-IQDLSLLYQLFSRVRG 485
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLK 358
V L + K V+ + ++ V+++++ DK ++ CF + F ++K
Sbjct: 486 GVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMK 545
Query: 359 EAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDL 418
EAFE F NK + AEL+A + D+ L+ G E +DE +E+ML+K++ + +I KD+
Sbjct: 546 EAFETFINK--RPNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKDV 602
Query: 419 FAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 478
F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 603 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF 662
Query: 479 EEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKL 538
++Y+ N N I+LTV +LT G+WP+Y +++LP EMVK E+F+ FY K RKL
Sbjct: 663 KQYMQNQ-NVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 721
Query: 539 TWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRL 598
W +LG C L +F+ EL V+ +Q LL+FN + S EI + D ++ R
Sbjct: 722 QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRT 781
Query: 599 LHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXX 654
L SL+C K ++L K P K I D F N F K+ RIKI
Sbjct: 782 LQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTER 841
Query: 655 XXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYL 714
R+Y IDA+IVRIMK RK L H LV E QL KP +KKRIE LI RDY+
Sbjct: 842 VFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYM 899
Query: 715 ERDKSNPNMFRYLA 728
ERDK NPN + Y+A
Sbjct: 900 ERDKENPNQYNYIA 913
Score = 289 (106.8 bits), Expect = 8.8e-22, P = 8.8e-22
Identities = 80/320 (25%), Positives = 170/320 (53%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE--LNGK 134
L+++ + W NH + + F +LDR ++ + S LP + ++GL FR + ++ + K
Sbjct: 286 LKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNK 345
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI++ER GE IDR+LL+++L + + + Y++ FE L++T Y+ +
Sbjct: 346 TIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRLYAAE 400
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE 254
+ E P+Y+ + L+ E DR+ YL +++ L+ V+ +LL + +L+K
Sbjct: 401 GQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQK- 459
Query: 255 HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKK 314
G + LL +++++DLS +++LFS++ G+ + + +++ A G+ +V E K
Sbjct: 460 --GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPE----KDK 513
Query: 315 AEKRDVVGLQEQV-FVRKVIEL-HDKYLAYVNDCFQNHTLFHKSLKEAFEVFC----NKG 368
++++ +++V + + L ++K++ + + F+ T +K + E+ +K
Sbjct: 514 TMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFE--TFINKRPNKPAELIAKYVDSKL 571
Query: 369 VAGSSSA--ELLATFCDNIL 386
AG+ A E L D I+
Sbjct: 572 RAGNKEATDEELEKMLDKIM 591
>FB|FBgn0033260 [details] [associations]
symbol:Cul-4 "Cullin-4" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0051533 "positive regulation of NFAT protein
import into nucleus" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0007307 "eggshell chorion gene
amplification" evidence=IDA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0051533 GO:GO:0006511 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0007307 GeneTree:ENSGT00550000074299
KO:K10609 OMA:FEDSLDF CTD:35780 EMBL:BT021374 EMBL:BT050475
RefSeq:NP_001163084.1 RefSeq:NP_610352.2 UniGene:Dm.4527 SMR:Q5BI50
IntAct:Q5BI50 STRING:Q5BI50 EnsemblMetazoa:FBtr0088821
EnsemblMetazoa:FBtr0301355 GeneID:35780 KEGG:dme:Dmel_CG8711
UCSC:CG8711-RA FlyBase:FBgn0033260 InParanoid:Q5BI50
OrthoDB:EOG4M0CGM GenomeRNAi:35780 NextBio:795178 Uniprot:Q5BI50
Length = 821
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 201/561 (35%), Positives = 307/561 (54%)
Query: 183 MLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHEL 242
ML D Y S ++ + + KAE K ++ V YL ++ +L E ++E
Sbjct: 281 MLCDLQIYTSSFEEKFL---DATNQLYKAESQRKMQELEVPEYLQHVNK-RLAE--ENER 334
Query: 243 LSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPV--SNIFKQHVTAEGT 300
L Y + S H L+ + + E L+ L S + +GLD + N G
Sbjct: 335 LRHYLDS------STKHPLIYNVEKELLAE--HLTSILQKGLDSLLEDNRLSDLTLLYGL 386
Query: 301 -ALVKLA-EDAASN-----KKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTL 352
+ VK + N KK + V+ + ++ V+ +++ DK V CF+++
Sbjct: 387 LSRVKNGTSELCGNFNGFIKKKGRTIVIDPEKDKSMVQDLLDFKDKMDVIVRTCFEHNEK 446
Query: 353 FHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAY 412
F SL+EAFE F N+ + AEL+A + D L+ G ++ +DE +E+ L+K++ L +
Sbjct: 447 FTNSLREAFEFFINQ--RANKPAELIAKYVDMKLRSG-NKGTTDEELEKTLDKIMVLFRF 503
Query: 413 ISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAR 472
I KD+F FY+K LA+RLL KSA+ D E+S+L+KLKQ+CGG FTSK+EGM D+ L+R
Sbjct: 504 IHGKDVFEAFYKKDLAKRLLVGKSASVDSEKSMLSKLKQECGGGFTSKLEGMFKDMELSR 563
Query: 473 ENQTSFEEY-LSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQT 531
+ +F + LSNN + + +DL V++LT G+WP+Y ++ +P + + ++F +FY
Sbjct: 564 DINIAFRGHALSNNRDVH-NLDLCVSILTMGYWPTYAPTEVTMPPQFINPQQIFNKFYLE 622
Query: 532 KTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLS 591
K RKL W +LG C L +F++ EL+V+ +QA LLLFN LSY EI+ +
Sbjct: 623 KHSGRKLQWQPTLGNCMLRAQFDAGPKELLVSLFQALVLLLFNDKPVLSYEEILAATLIE 682
Query: 592 DDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXX 647
D ++ R L SL+C + +++ K P + I D F+FN++FT+K+ RIKI
Sbjct: 683 DGELRRTLQSLACGRARVITKTPKGREILDGDQFDFNNEFTNKLFRIKINQIQMKETNEE 742
Query: 648 XXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIED 707
R+Y IDA+IVRIMK RK L H L+ E QL KP +KKRIE
Sbjct: 743 QKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLITELFNQLTFPVKP--ADLKKRIES 800
Query: 708 LITRDYLERDKSNPNMFRYLA 728
LI RDY+ERDK N N + Y+A
Sbjct: 801 LIDRDYMERDKDNQNQYNYVA 821
Score = 266 (98.7 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 74/286 (25%), Positives = 147/286 (51%)
Query: 74 DEFMLRELVKRW----SNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVY 128
D+ +L E + W +M+R + F Y+DR ++ + S + + ++GL FR ++
Sbjct: 188 DKLILLEKINHWWLSFCQQMIMIRSI---FLYMDRTYVLQNSTVHSIWDMGLDLFR--IH 242
Query: 129 TELNGKVR----DAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAML 184
N V+ D ++TLI++ER+G +DR LLK+++ + ++ + Y + FE L
Sbjct: 243 FAQNSVVQKRTVDGLLTLIEKERQGSTVDRGLLKSLVRMLCDLQI-----YTSSFEEKFL 297
Query: 185 KDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLS 244
T Y ++ + E P+Y+ + L E +R+ HYL SS++ L+ V+ ELL+
Sbjct: 298 DATNQLYKAESQRKMQELEVPEYLQHVNKRLAEENERLRHYLDSSTKHPLIYNVEKELLA 357
Query: 245 VYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVK 304
+ +L+K G +LL D+++ DL+ ++ L S++ G + F + +G +V
Sbjct: 358 EHLTSILQK---GLDSLLEDNRLSDLTLLYGLLSRVKNGTSELCGNFNGFIKKKGRTIVI 414
Query: 305 LAEDAASNKKAEKRDVVGLQEQ--VFVRKVIELHDKYLAYVNDCFQ 348
E K+ +D++ +++ V VR E ++K+ + + F+
Sbjct: 415 DPE----KDKSMVQDLLDFKDKMDVIVRTCFEHNEKFTNSLREAFE 456
>UNIPROTKB|E1BQK9 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:AADN02013619 IPI:IPI00584907 Ensembl:ENSGALT00000013942
Uniprot:E1BQK9
Length = 884
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 195/554 (35%), Positives = 290/554 (52%)
Query: 182 AMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHE 241
+ML D Y + LE++ Y + + L +E++ V YLH + K LE+
Sbjct: 343 SMLSDLQIYQD-SFEHRFLEETNRLYAAEGQR-LMQERE-VPEYLHHVN--KRLEEEADR 397
Query: 242 LLSVYANQLLEKEHSGC--HALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
+++ Y +Q +K LL + L + R + +S +++ G
Sbjct: 398 IIT-YLDQSTQKPLIATVEKQLLGEHLTAILQKGLNHLLDENR-IQDLSLLYQLFSRVRG 455
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLK 358
V L K V+ + ++ V+++++ DK ++ CF + F ++K
Sbjct: 456 GVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMK 515
Query: 359 EAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDL 418
EAFE F NK + AEL+A + D+ L+ G E +DE +E+ML+K++ + +I KD+
Sbjct: 516 EAFETFINK--RPNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKDV 572
Query: 419 FAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 478
F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 573 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF 632
Query: 479 EEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKL 538
++ N N I+LTV +LT G+WP+Y +++LP EMVK E+F+ FY K RKL
Sbjct: 633 KQQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 692
Query: 539 TWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRL 598
W +LG C L +F+ EL V+ +Q LL+FN + S EI + D ++ R
Sbjct: 693 QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRT 752
Query: 599 LHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXX 654
L SL+C K ++L K P K + D F N F K+ RIKI
Sbjct: 753 LQSLACGKARVLTKSPKGKDVEDGDKFTCNDDFRHKLFRIKINQIQMKETVEEQASTTER 812
Query: 655 XXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYL 714
R+Y IDA+IVRIMK RK L H LV E QL KP +KKRIE LI RDY+
Sbjct: 813 VFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYM 870
Query: 715 ERDKSNPNMFRYLA 728
ERDK NPN + Y+A
Sbjct: 871 ERDKENPNQYNYIA 884
Score = 291 (107.5 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 82/320 (25%), Positives = 170/320 (53%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE--LNGK 134
L+++ K W +H + + F +LDR ++ + S LP + ++GL FR + ++ + K
Sbjct: 256 LKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRTHIISDQKVQNK 315
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI++ER GE IDR+LL+++L + + + Y++ FE L++T Y+ +
Sbjct: 316 TIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEHRFLEETNRLYAAE 370
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE 254
+ E P+Y+ + L+ E DR+ YL S++ L+ V+ +LL + +L+K
Sbjct: 371 GQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPLIATVEKQLLGEHLTAILQK- 429
Query: 255 HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKK 314
G + LL +++++DLS +++LFS++ G+ + + +++ A G+ +V E K
Sbjct: 430 --GLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPE----KDK 483
Query: 315 AEKRDVVGLQEQV-FVRKVIEL-HDKYLAYVNDCFQNHTLFHKSLKEAFEVFC----NKG 368
++++ +++V + V L ++K++ + + F+ T +K + E+ +K
Sbjct: 484 TMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFE--TFINKRPNKPAELIAKYVDSKL 541
Query: 369 VAGSSSA--ELLATFCDNIL 386
AG+ A E L D I+
Sbjct: 542 RAGNKEATDEELEKMLDKIM 561
>UNIPROTKB|Q13617 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IDA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 Reactome:REACT_120956 GO:GO:0005829
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0000082 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 EMBL:CH471072 GO:GO:0006511 GO:GO:0097193
eggNOG:COG5647 SUPFAM:SSF75632 Pathway_Interaction_DB:hif1apathway
GO:GO:0061418 GO:GO:0031462 GO:GO:0031625 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE
EMBL:U83410 EMBL:AF126404 EMBL:AK095217 EMBL:AK300491 EMBL:AL392046
EMBL:BC009591 EMBL:BC110901 EMBL:U58088 IPI:IPI00014311
IPI:IPI00985090 RefSeq:NP_001185706.1 RefSeq:NP_001185707.1
RefSeq:NP_001185708.1 RefSeq:NP_003582.2 UniGene:Hs.82919
ProteinModelPortal:Q13617 SMR:Q13617 DIP:DIP-31612N IntAct:Q13617
MINT:MINT-1523339 STRING:Q13617 PhosphoSite:Q13617 DMDM:19863260
PaxDb:Q13617 PRIDE:Q13617 DNASU:8453 Ensembl:ENST00000374748
Ensembl:ENST00000374749 Ensembl:ENST00000374751
Ensembl:ENST00000537177 GeneID:8453 KEGG:hsa:8453 UCSC:uc001ixv.3
CTD:8453 GeneCards:GC10M035338 HGNC:HGNC:2552 HPA:CAB002677
HPA:HPA024578 MIM:603135 neXtProt:NX_Q13617 PharmGKB:PA27048
InParanoid:Q13617 OrthoDB:EOG4Z0B51 PhylomeDB:Q13617 ChiTaRS:CUL2
GenomeRNAi:8453 NextBio:31634 ArrayExpress:Q13617 Bgee:Q13617
CleanEx:HS_CUL2 Genevestigator:Q13617 GermOnline:ENSG00000108094
Uniprot:Q13617
Length = 745
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 213/769 (27%), Positives = 364/769 (47%)
Query: 1 MTMNERKTIDLEQGWEFMQ---KGITKLKNILEGLPEPQFSSEDYMMLYTYLFQPHLVSA 57
M++ R +D ++ W + K + L+ + +FS + Y + Y +P
Sbjct: 1 MSLKPR-VVDFDETWNKLLTTIKAVVMLEYVERATWNDRFS-DIYALCVAYP-EPLGERL 57
Query: 58 FVNILLLVLPSIREKHDEFMLRE---LV---KRWSNHKVMVRWLSRFFHYLDRYFIARRS 111
+ + + +R H + E LV + W + ++ + YL+ FI +
Sbjct: 58 YTETKIFLENHVRHLHKRVLESEEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNK 117
Query: 112 LP---------------PLNEVG---LTCFRDLVYTELNGKVRDAVITLIDQEREGEQID 153
L PL E+G L +R L+ L + ++ I +R GE +
Sbjct: 118 LTEADLQYGYGGVDMNEPLMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPN 177
Query: 154 RALLKNVLDIFVEIGMGQ----MDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYML 209
+ ++ V++ FV + + + +Y+ FE+ L +T YY ++ASN + E +C YM
Sbjct: 178 QKVIHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYME 237
Query: 210 KAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVED 269
K LK E+ R YLH SS K++ + Q +++ + Q L H+ CH ++R +K D
Sbjct: 238 KVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFL---HAECHNIIRQEKKND 293
Query: 270 LSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFV 329
++ M+ L + GL + + H+ EG A SN E + FV
Sbjct: 294 MANMYVLLRAVSTGLPHMIQELQNHIHDEGLR-------ATSNLTQENMPTL------FV 340
Query: 330 RKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGS--SSAELLATFCDNILK 387
V+E+H K++ +N F +L +A N S + ELLA +CDN+LK
Sbjct: 341 ESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLK 400
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
K ++ +++ +E+ L + + YI DKD+F +FY + LA+RL+ S + D E +++
Sbjct: 401 KS-AKGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMIN 459
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNA-NPGIDLTVTVLTTGFWPS 506
KLKQ CG +FTSK+ M TD++++ + F ++ N + GI + VL G WP
Sbjct: 460 KLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPL 519
Query: 507 YK--SFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTT 564
+ S +P E+ K V++F FY RKLTW++ L T + + + +VTT
Sbjct: 520 TQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTT 579
Query: 565 YQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDH 624
YQ + LL FN+S+ +SY E+ +++ ++ + + SL K++N + + I
Sbjct: 580 YQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESS 637
Query: 625 FEFNSKFTDKMRRIKIPLP-----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGH 679
F N F+ K + KI P + Y + A+IVRIMK+RKVL H
Sbjct: 638 FSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMY-LQAAIVRIMKARKVLRH 696
Query: 680 QQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
L+ E + Q F P IKK IE LI + Y+ER +++ + + Y+A
Sbjct: 697 NALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
>DICTYBASE|DDB_G0267384 [details] [associations]
symbol:culB "cullin B" species:44689 "Dictyostelium
discoideum" [GO:0031286 "negative regulation of sorocarp stalk cell
differentiation" evidence=IGI;IMP] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0267384 GO:GO:0007275
GenomeReviews:CM000150_GR EMBL:AAFI02000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511 GO:GO:0031286
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q13616 ProtClustDB:CLSZ2429454 EMBL:AF144717
RefSeq:XP_647212.1 ProteinModelPortal:Q9XZJ3 STRING:Q9XZJ3
EnsemblProtists:DDB0191260 GeneID:8616016 KEGG:ddi:DDB_G0267384
OMA:SECINYL Uniprot:Q9XZJ3
Length = 771
Score = 640 (230.4 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 161/584 (27%), Positives = 313/584 (53%)
Query: 61 ILLLVLPSIREKHDEFMLRELVKRWSN----HKVMVRWLSRFFHYLDRYFIARR-SLPP- 114
ILL++L + + E+ L++ +S +KV+ R+L+ +++++ + ++ PP
Sbjct: 72 ILLIILDTKSDTISEY-LKQWKLFFSGCELCNKVIFRYLN--LNWINKKILDKKFGHPPD 128
Query: 115 ---LNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQ 171
+ +GL +++ ++ ++ +V V LI ++R+GE + + ++ +++
Sbjct: 129 VYEIQILGLMIWKERLFFKIKDRVLKCVEILIQKDRDGELVQHQFISQFMESLIKLDSVD 188
Query: 172 MD--YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSS 229
D Y ++E + L++T +Y+R++ +I YM KAE + E+ R YL+SS
Sbjct: 189 KDRTLYLIEYEASYLENTRQFYTRESVAFIASSGISSYMKKAETRIDEEEQRSQKYLNSS 248
Query: 230 SEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSN 289
S K+ ++ H +L +LL+ E C L+D+K++++ M++L S+I GL PV
Sbjct: 249 SHDKM-RRLLHSILIEKHKELLQSE---CINYLKDEKLDEIYNMYKLLSRIEGGLAPVLE 304
Query: 290 IFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQN 349
++++ G +K D N K ++V +++++ ++ + + F N
Sbjct: 305 TVQKYIQHVGIDAIKSIPDR--NNPDPK---------IYVETLLKIYLQFSSIIKKSFNN 353
Query: 350 HTLFHKSLKEA-FEVFCNKGVAGSS--SAELLATFCDNILKKGGSEKLSDEAIEEMLEKV 406
F L A ++F + ++ S ELLA +CD +LKKG + E +EE L ++
Sbjct: 354 DVSFITVLDLACHKIFNQNHITRNTTKSPELLAKYCDMLLKKGNKQHEEIE-LEEKLGQI 412
Query: 407 VKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVT 466
+ L Y+ DKD+F +FY K L+RRL+ S +DD E+ ++T LKQ CG ++TSK + M
Sbjct: 413 IVLFKYVDDKDVFQKFYSKMLSRRLINGTSVSDDIEKFMITGLKQACGFEYTSKFQRMFN 472
Query: 467 DLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY-KSFDLNLPAEMVKCVEVF 525
D+TL+ E F+ +L N + ID ++ VLT+G W + ++ +P E+ C+ F
Sbjct: 473 DITLSAETNEEFKNHLIKNSLSIGKIDFSILVLTSGSWSLHSQTSSFIVPQELTLCISAF 532
Query: 526 REFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIM 585
+++Y T+ + RKL W++ L F ++ + VT +Q LL+FN+ + +S EI
Sbjct: 533 QQYYSTQHQGRKLNWLHHLCKAEAKSFFAKKSYDFQVTNFQLGILLIFNTQESVSLEEIT 592
Query: 586 TQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNS 629
NL+++++ R L SL AK +++K+ + +I+ ++ N+
Sbjct: 593 KFTNLNENELSRTLQSLIEAKI-LISKKKDQNSINNNNNNNNNN 635
Score = 150 (57.9 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 37/123 (30%), Positives = 62/123 (50%)
Query: 611 NKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLP-----PXXXXXXXXXXXXXXRRYAIDA 665
N +P++ + S T + NS +++K ++K+ P + Y + A
Sbjct: 651 NMQPSSSS-SSTQEYTVNSAYSNKRSKVKVSSSLQKETPLQNEETYKGIDEDRKLY-LQA 708
Query: 666 SIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFR 725
SIVRIMK+RK + H L+ E +E F+P+ IKK IE LI ++Y+ R + + +
Sbjct: 709 SIVRIMKARKTMNHVSLIQEVIEHSRLRFQPNIPMIKKCIEQLIEKEYITRAEGESDRYL 768
Query: 726 YLA 728
Y A
Sbjct: 769 YAA 771
>UNIPROTKB|Q08DE9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:DAAA02035372 EMBL:BC123787 EMBL:BC150023 IPI:IPI00704669
RefSeq:NP_001070377.1 UniGene:Bt.38802 STRING:Q08DE9
Ensembl:ENSBTAT00000055001 GeneID:535219 KEGG:bta:535219
InParanoid:Q08DE9 NextBio:20876664 Uniprot:Q08DE9
Length = 745
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 213/769 (27%), Positives = 364/769 (47%)
Query: 1 MTMNERKTIDLEQGWEFMQ---KGITKLKNILEGLPEPQFSSEDYMMLYTYLFQPHLVSA 57
M++ R +D ++ W + K + L+ + +FS + Y + Y +P
Sbjct: 1 MSLKPR-VVDFDETWSKLLTTIKAVVMLEYVERATWNDRFS-DIYALCVAYP-EPLGERL 57
Query: 58 FVNILLLVLPSIREKHDEFMLRE---LV---KRWSNHKVMVRWLSRFFHYLDRYFIARRS 111
+ + + +R H + E LV + W + ++ + YL+ FI +
Sbjct: 58 YTETKIFLENHVRHLHKRVLESEEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNK 117
Query: 112 LP---------------PLNEVG---LTCFRDLVYTELNGKVRDAVITLIDQEREGEQID 153
L PL E+G L +R L+ L + ++ I +R GE +
Sbjct: 118 LTEADLQYGYGGVDMNEPLMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPN 177
Query: 154 RALLKNVLDIFVEIGMGQ----MDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYML 209
+ ++ V++ FV + + + +Y+ FE+ L +T YY ++ASN + E +C YM
Sbjct: 178 QKVIHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYME 237
Query: 210 KAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVED 269
K LK E+ R YLH SS K++ + Q +++ + Q L H+ CH ++R +K D
Sbjct: 238 KVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFL---HAECHNIIRQEKKND 293
Query: 270 LSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFV 329
++ M+ L + GL + + H+ EG A SN E + FV
Sbjct: 294 MANMYVLLRAVSTGLPHMIQELQNHIHDEGLR-------ATSNLTQENMPTL------FV 340
Query: 330 RKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGS--SSAELLATFCDNILK 387
V+E+H K++ +N F +L +A N S + ELLA +CDN+LK
Sbjct: 341 ESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLK 400
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
K ++ +++ +E+ L + + YI DKD+F +FY + LA+RL+ S + D E +++
Sbjct: 401 KS-AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMIN 459
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNA-NPGIDLTVTVLTTGFWPS 506
KLKQ CG +FTSK+ M TD++++ + F ++ N + GI + VL G WP
Sbjct: 460 KLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPL 519
Query: 507 YK--SFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTT 564
+ S +P E+ K V++F FY RKLTW++ L T + + + +VTT
Sbjct: 520 TQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTT 579
Query: 565 YQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDH 624
YQ + LL FN+S+ +SY E+ +++ ++ + + SL K++N + + I
Sbjct: 580 YQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDVESS 637
Query: 625 FEFNSKFTDKMRRIKIPLP-----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGH 679
F N F+ K + KI P + Y + A+IVRIMK+RKVL H
Sbjct: 638 FSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMY-LQAAIVRIMKARKVLRH 696
Query: 680 QQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
L+ E + Q F P IKK IE LI + Y+ER +++ + + Y+A
Sbjct: 697 NALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
>UNIPROTKB|E2QRU7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03870 OMA:VMLDYVE CTD:8453
EMBL:AAEX03001145 RefSeq:XP_535140.2 Ensembl:ENSCAFT00000005971
GeneID:477952 KEGG:cfa:477952 NextBio:20853352 Uniprot:E2QRU7
Length = 745
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 213/769 (27%), Positives = 364/769 (47%)
Query: 1 MTMNERKTIDLEQGWEFMQ---KGITKLKNILEGLPEPQFSSEDYMMLYTYLFQPHLVSA 57
M++ R +D ++ W + K + L+ + +FS + Y + Y +P
Sbjct: 1 MSLKPR-VVDFDETWNKLLTTIKAVVMLEYVERATWNDRFS-DIYALCVAYP-EPLGERL 57
Query: 58 FVNILLLVLPSIREKHDEFMLRE---LV---KRWSNHKVMVRWLSRFFHYLDRYFIARRS 111
+ + + +R H + E LV + W + ++ + YL+ FI +
Sbjct: 58 YTETKIFLENHVRHLHKRVLESEEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNK 117
Query: 112 LP---------------PLNEVG---LTCFRDLVYTELNGKVRDAVITLIDQEREGEQID 153
L PL E+G L +R L+ L + ++ I +R GE +
Sbjct: 118 LTEADLQYGYGGVDMNEPLMEIGELALDMWRKLMVEPLQTILIRMLLREIKNDRGGEDPN 177
Query: 154 RALLKNVLDIFVEIGMGQ----MDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYML 209
+ ++ V++ FV + + + +Y+ FE+ L +T YY ++ASN + E +C YM
Sbjct: 178 QKVIHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYME 237
Query: 210 KAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVED 269
K LK E+ R YLH SS K++ + Q +++ + Q L H+ CH ++R +K D
Sbjct: 238 KVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFL---HAECHNIIRQEKKND 293
Query: 270 LSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFV 329
++ M+ L + GL + + H+ EG A SN E + FV
Sbjct: 294 MANMYVLLRAVSTGLPHMIQELQNHIQDEGLR-------ATSNLTQENMPTL------FV 340
Query: 330 RKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGS--SSAELLATFCDNILK 387
V+E+H K++ +N F +L +A N S + ELLA +CDN+LK
Sbjct: 341 ESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLK 400
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
K ++ +++ +E+ L + + YI DKD+F +FY + LA+RL+ S + D E +++
Sbjct: 401 KS-AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMIN 459
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNA-NPGIDLTVTVLTTGFWPS 506
KLKQ CG +FTSK+ M TD++++ + F ++ N + GI + VL G WP
Sbjct: 460 KLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPL 519
Query: 507 YK--SFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTT 564
+ S +P E+ K V++F FY RKLTW++ L T + + + +VTT
Sbjct: 520 TQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTT 579
Query: 565 YQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDH 624
YQ + LL FN+S+ +SY E+ +++ ++ + + SL K++N + + I
Sbjct: 580 YQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDTESS 637
Query: 625 FEFNSKFTDKMRRIKIPLP-----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGH 679
F N F+ K + KI P + Y + A+IVRIMK+RKVL H
Sbjct: 638 FSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMY-LQAAIVRIMKARKVLRH 696
Query: 680 QQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
L+ E + Q F P IKK IE LI + Y+ER +++ + + Y+A
Sbjct: 697 NALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
>UNIPROTKB|F1Q284 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 CTD:8451 OMA:KVSATLY
EMBL:AAEX03013408 RefSeq:XP_849542.3 Ensembl:ENSCAFT00000010211
GeneID:607683 KEGG:cfa:607683 Uniprot:F1Q284
Length = 761
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 198/558 (35%), Positives = 298/558 (53%)
Query: 182 AMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHE 241
+ML D Y ++ E +C Y + + L +E++ V YL+ S K LE+
Sbjct: 221 SMLSDLQVYKDSFELKFLEETNCL-YAAEGQR-LMQERE-VPEYLNHVS--KRLEEEGDR 275
Query: 242 LLSVYANQLLEKEHSGC--HALLRDDKVEDLSR-MFRLF--SKIPRGLDPVSNIFKQHVT 296
+++ Y + +K C LL + L + + L +++P L + +F +
Sbjct: 276 VIT-YLDHSTQKPLIACVEKQLLGEHLTAILHKGLDHLLDENRVP-DLTQMYQLFSR--- 330
Query: 297 AEGTALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHK 355
+G + L + K V+ + ++ V+ +++ D+ + CFQ + F
Sbjct: 331 VKGGQQILLQHWSEYIKTFGTTIVINPEKDKDMVQDLLDFKDRVDHVIEVCFQRNEKFIN 390
Query: 356 SLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISD 415
+KE+FE F NK + AEL+A D+ L+ G E +DE +E +L+KV+ + +I
Sbjct: 391 LMKESFETFINK--RPNKPAELIAKHVDSKLRAGNKEA-TDEELERILDKVMIIFRFIHG 447
Query: 416 KDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 475
KD+F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++
Sbjct: 448 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIM 507
Query: 476 TSFEEYLSNNPNANPG-IDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTK 534
F++Y+ N ++PG IDLTV +LT G+WP+Y +++L EM+K EVF+ FY K
Sbjct: 508 VQFKQYMQNQ--SDPGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHS 565
Query: 535 HRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDD 594
RKL W +LG L +F+ E V+ +Q LL+FN D S+ EI + D +
Sbjct: 566 GRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSE 625
Query: 595 VVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXX 650
+ R L SL+C K ++L K P K + D F FN +F K+ RIKI
Sbjct: 626 LRRTLQSLACGKARVLVKSPKGKEVEDGDTFMFNGEFKHKLFRIKINQIQMKETVEEQVS 685
Query: 651 XXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLIT 710
R+Y IDA+IVRIMK RK LGH LV E QL KP +KKRIE LI
Sbjct: 686 TTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLID 743
Query: 711 RDYLERDKSNPNMFRYLA 728
RDY+ERDK NPN + Y+A
Sbjct: 744 RDYMERDKDNPNQYHYVA 761
Score = 288 (106.4 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 80/320 (25%), Positives = 165/320 (51%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE--LNGK 134
L+++ W +H + + F +LDR ++ + S LP + ++GL FR+ + ++ + K
Sbjct: 134 LKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDKMVQSK 193
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI++ER GE +DR+LL+++L + + + Y++ FE L++T Y+ +
Sbjct: 194 SIDGILLLIERERNGEAVDRSLLRSLLSM-----LSDLQVYKDSFELKFLEETNCLYAAE 248
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE 254
+ E P+Y+ + L+ E DRV YL S++ L+ V+ +LL + +L
Sbjct: 249 GQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAIL--- 305
Query: 255 HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKK 314
H G LL +++V DL++M++LFS++ G + + +++ GT +V E K
Sbjct: 306 HKGLDHLLDENRVPDLTQMYQLFSRVKGGQQILLQHWSEYIKTFGTTIVINPE----KDK 361
Query: 315 AEKRDVVGLQEQV--FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFC----NKG 368
+D++ +++V + + ++K++ + + F+ T +K + E+ +K
Sbjct: 362 DMVQDLLDFKDRVDHVIEVCFQRNEKFINLMKESFE--TFINKRPNKPAELIAKHVDSKL 419
Query: 369 VAGSSSA--ELLATFCDNIL 386
AG+ A E L D ++
Sbjct: 420 RAGNKEATDEELERILDKVM 439
>UNIPROTKB|D4A0H4 [details] [associations]
symbol:Cul2 "Cullin 2 (Predicted), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031462 "Cul2-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 RGD:1310644 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K03870 CTD:8453 EMBL:CH474030 IPI:IPI00947898
RefSeq:NP_001101887.1 UniGene:Rn.2970 Ensembl:ENSRNOT00000066805
GeneID:361258 KEGG:rno:361258 NextBio:675723 Uniprot:D4A0H4
Length = 725
Score = 549 (198.3 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 131/411 (31%), Positives = 214/411 (52%)
Query: 335 LHDKYLAYVNDCFQNH--TLFHKSLKEA---FEVFCNKGVAGS----SSAELLATFCDNI 385
+HD+ L ++ Q H TLF +S+ E F N + G S+ + LA +CDN+
Sbjct: 319 IHDEGLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKLAKYCDNL 378
Query: 386 LKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSI 445
LKK ++ +++ +E+ L + + YI DKD+F +FY + LA+RL+ S + D E ++
Sbjct: 379 LKKS-AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAM 437
Query: 446 LTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNA-NPGIDLTVTVLTTGFW 504
+ KLKQ CG +FTSK+ M TD++++ + F ++ N + GI + VL G W
Sbjct: 438 INKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDTVIDLGISFQIYVLQAGAW 497
Query: 505 PSYK--SFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIV 562
P + S +P E+ K V++F FY RKLTW++ L T + + + +V
Sbjct: 498 PLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMV 557
Query: 563 TTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPT 622
TTYQ + LL FN+S+ +SY E+ +++ ++ + + SL K++N + + I
Sbjct: 558 TTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAE 615
Query: 623 DHFEFNSKFTDKMRRIKIPLP-----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVL 677
F N F+ K + KI P + Y + A+IVRIMK+RKVL
Sbjct: 616 SSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDEDRKMY-LQAAIVRIMKARKVL 674
Query: 678 GHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
H L+ E + Q F P IKK IE LI + Y+ER +++ + + Y+A
Sbjct: 675 RHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 725
Score = 238 (88.8 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 69/260 (26%), Positives = 125/260 (48%)
Query: 114 PLNEVG---LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMG 170
PL E+G L +R L+ L + ++ I +R GE ++ ++ V++ FV +
Sbjct: 135 PLMEIGELALDMWRKLMVEPLQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQY 194
Query: 171 Q----MDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL 226
+ + +Y+ F + L +T YY ++ASN + E +C YM K LK E+ R YL
Sbjct: 195 KKKFPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYL 254
Query: 227 HSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDP 286
H SS K++ + Q +++ + Q L HS CH+++R ++ D++ M+ L + GL
Sbjct: 255 HPSSYTKVIHECQQRMVADHL-QFL---HSECHSIIRHERKNDMANMYVLLRAVSSGLPH 310
Query: 287 VSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDC 346
+ ++H+ EG A SN E + FV V+E+H K++ +N
Sbjct: 311 MIEELQRHIHDEGLR-------ATSNLTQEHMPTL------FVESVLEVHGKFVQLINTV 357
Query: 347 FQNHTLFHKSLKEAFEVFCN 366
F +L + + +C+
Sbjct: 358 LNGDQHFMSALDKLAK-YCD 376
>UNIPROTKB|Q13619 [details] [associations]
symbol:CUL4A "Cullin-4A" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0051246 "regulation of protein metabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0019048 GO:GO:0008285 GO:GO:0000082
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006511 GO:GO:0097193 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619 EMBL:AF077188
EMBL:AY365124 EMBL:AB178950 EMBL:AL136221 EMBL:BC008308
EMBL:AB012193 EMBL:U58090 IPI:IPI00419273 IPI:IPI00549919
RefSeq:NP_001008895.1 RefSeq:NP_003580.1 UniGene:Hs.339735 PDB:2HYE
PDB:4A0K PDBsum:2HYE PDBsum:4A0K ProteinModelPortal:Q13619
SMR:Q13619 DIP:DIP-31610N IntAct:Q13619 MINT:MINT-4532640
STRING:Q13619 PhosphoSite:Q13619 DMDM:108936013 PaxDb:Q13619
PRIDE:Q13619 DNASU:8451 Ensembl:ENST00000326335
Ensembl:ENST00000375440 Ensembl:ENST00000375441
Ensembl:ENST00000451881 GeneID:8451 KEGG:hsa:8451 UCSC:uc010agu.3
CTD:8451 GeneCards:GC13P113863 HGNC:HGNC:2554 MIM:603137
neXtProt:NX_Q13619 PharmGKB:PA27050 InParanoid:Q13619 OMA:KVSATLY
EvolutionaryTrace:Q13619 GenomeRNAi:8451 NextBio:31624
ArrayExpress:Q13619 Bgee:Q13619 CleanEx:HS_CUL4A
Genevestigator:Q13619 GermOnline:ENSG00000139842 GO:GO:0051246
Uniprot:Q13619
Length = 759
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 167/409 (40%), Positives = 237/409 (57%)
Query: 324 QEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCD 383
+++ V+ +++ DK + CFQ + F +KE+FE F NK + AEL+A D
Sbjct: 357 KDKDMVQDLLDFKDKVDHVIEVCFQKNERFVNLMKESFETFINK--RPNKPAELIAKHVD 414
Query: 384 NILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHER 443
+ L+ G E +DE +E L+K++ L +I KD+F FY+K LA+RLL KSA+ D E+
Sbjct: 415 SKLRAGNKEA-TDEELERTLDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEK 473
Query: 444 SILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGF 503
S+L+KLK +CG FTSK+EGM D+ L+++ F++++ N ++ P IDLTV +LT G+
Sbjct: 474 SMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQNQSDSGP-IDLTVNILTMGY 532
Query: 504 WPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVT 563
WP+Y +++L EM+K EVF+ FY K RKL W +LG L +F+ E V+
Sbjct: 533 WPTYTPMEVHLTPEMIKLQEVFKAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVS 592
Query: 564 TYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTD 623
+Q LL+FN D S+ EI + D ++ R L SL+C K ++L K P K + D
Sbjct: 593 LFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGD 652
Query: 624 HFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGH 679
F FN +F K+ RIKI R+Y IDA+IVRIMK RK LGH
Sbjct: 653 KFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGH 712
Query: 680 QQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
LV E QL KP +KKRIE LI RDY+ERDK NPN + Y+A
Sbjct: 713 NLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDNPNQYHYVA 759
Score = 292 (107.8 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 84/334 (25%), Positives = 172/334 (51%)
Query: 65 VLPSIREKHDEFM-LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTC 122
+LP + D + L+++ W +H + + F +LDR ++ + S LP + ++GL
Sbjct: 118 ILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSTLPSIWDMGLEL 177
Query: 123 FRDLVYTE--LNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFE 180
FR + ++ + K D ++ LI++ER GE +DR+LL+++L + + + Y++ FE
Sbjct: 178 FRTHIISDKMVQSKTIDGILLLIERERSGEAVDRSLLRSLLGM-----LSDLQVYKDSFE 232
Query: 181 TAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQH 240
L++T Y+ + + E P+Y+ + L+ E DRV YL S++ L+ V+
Sbjct: 233 LKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVEK 292
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGT 300
+LL + +L+K G LL +++V DL++M++LFS++ G + + +++ GT
Sbjct: 293 QLLGEHLTAILQK---GLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHWSEYIKTFGT 349
Query: 301 ALVKLAEDAASNKKAEKRDVVGLQEQV--FVRKVIELHDKYLAYVNDCFQNHTLFHKSLK 358
A+V E K +D++ +++V + + +++++ + + F+ T +K
Sbjct: 350 AIVINPE----KDKDMVQDLLDFKDKVDHVIEVCFQKNERFVNLMKESFE--TFINKRPN 403
Query: 359 EAFEVFC----NKGVAGSSSA--ELLATFCDNIL 386
+ E+ +K AG+ A E L D I+
Sbjct: 404 KPAELIAKHVDSKLRAGNKEATDEELERTLDKIM 437
>UNIPROTKB|F1N3S4 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:DAAA02034947 IPI:IPI00699975
Ensembl:ENSBTAT00000026769 Uniprot:F1N3S4
Length = 720
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 200/557 (35%), Positives = 298/557 (53%)
Query: 183 MLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHEL 242
ML D Y ++ E +C Y + + L +E++ V YL S K LE+ +
Sbjct: 181 MLSDLQVYKDSFELKFLEETNCL-YAAEGQR-LMQERE-VPEYLDHVS--KRLEEEADRV 235
Query: 243 LSVYANQLLEKEHSGC--HALLRDDKVEDLSR-MFRLF--SKIPRGLDPVSNIFKQHVTA 297
++ Y + +K C LL + L + + L +++P L + +F + V
Sbjct: 236 IT-YLDHSTQKPLIACVEKQLLGEHLTAILQKGLDHLLDENRVP-DLTQMYQLFSR-VRG 292
Query: 298 EGTALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKS 356
AL++ D K V+ + ++ V+ +++ D+ ++ CFQ F
Sbjct: 293 GQQALLQHWSDYI--KTFGTTIVINPEKDKDMVQDLLDFKDRVDHVIDVCFQRSEKFVNL 350
Query: 357 LKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDK 416
+KE+FE F NK + AEL+A D+ L+ G E +DE +E ML+KV+ L +I K
Sbjct: 351 MKESFETFINK--RPNKPAELIAKHVDSKLRAGNKEA-TDEELERMLDKVMILFRFIHGK 407
Query: 417 DLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQT 476
D+F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++
Sbjct: 408 DVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMV 467
Query: 477 SFEEYLSNNPNANPG-IDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKH 535
F++Y+ N ++PG IDLTV +LT G+WP+Y +++L EM+K EVF+ FY K
Sbjct: 468 HFKQYMQNQ--SDPGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSG 525
Query: 536 RKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDV 595
RKL W +LG L +F+ E V+ +Q LL+FN D S+ +I + D ++
Sbjct: 526 RKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEDIRMATGIEDSEL 585
Query: 596 VRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXX 651
R L SL+C K ++L K P K + D F FN++F K+ RIKI
Sbjct: 586 RRTLQSLACGKARVLLKSPKGKEVEDGDKFLFNAEFKHKLFRIKINQIQMKETVEEQVST 645
Query: 652 XXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITR 711
R+Y IDA+IVRIMK RK LGH LV E QL KP +KKRIE LI R
Sbjct: 646 TERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDR 703
Query: 712 DYLERDKSNPNMFRYLA 728
DY+ERDK +PN + Y+A
Sbjct: 704 DYMERDKDSPNQYHYVA 720
Score = 280 (103.6 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 80/320 (25%), Positives = 164/320 (51%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE--LNGK 134
L+++ W +H + + F +LDR ++ + S LP + ++GL FR+ + ++ + K
Sbjct: 93 LKKMNTCWQDHCRQMIMIRSIFLFLDRTYVLQNSTLPSIWDMGLELFRNHIISDKMVQTK 152
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI++ER GE +DR+LL+++L + + + Y++ FE L++T Y+ +
Sbjct: 153 TIDGILLLIERERSGEAVDRSLLRSLLGM-----LSDLQVYKDSFELKFLEETNCLYAAE 207
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE 254
+ E P+Y+ + L+ E DRV YL S++ L+ V+ +LL + +L+K
Sbjct: 208 GQRLMQEREVPEYLDHVSKRLEEEADRVITYLDHSTQKPLIACVEKQLLGEHLTAILQK- 266
Query: 255 HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKK 314
G LL +++V DL++M++LFS++ G + + ++ GT +V E K
Sbjct: 267 --GLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWSDYIKTFGTTIVINPE----KDK 320
Query: 315 AEKRDVVGLQEQV--FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFC----NKG 368
+D++ +++V + + +K++ + + F+ T +K + E+ +K
Sbjct: 321 DMVQDLLDFKDRVDHVIDVCFQRSEKFVNLMKESFE--TFINKRPNKPAELIAKHVDSKL 378
Query: 369 VAGSSSA--ELLATFCDNIL 386
AG+ A E L D ++
Sbjct: 379 RAGNKEATDEELERMLDKVM 398
>MGI|MGI:1914487 [details] [associations]
symbol:Cul4a "cullin 4A" species:10090 "Mus musculus"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0051246 "regulation of protein metabolic process"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1914487 GO:GO:0019048 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0045732 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619
CTD:8451 EMBL:AK168215 EMBL:AK170722 EMBL:BC010211 IPI:IPI00321407
RefSeq:NP_666319.2 UniGene:Mm.212861 ProteinModelPortal:Q3TCH7
SMR:Q3TCH7 STRING:Q3TCH7 PhosphoSite:Q3TCH7 PaxDb:Q3TCH7
PRIDE:Q3TCH7 Ensembl:ENSMUST00000016680 GeneID:99375 KEGG:mmu:99375
UCSC:uc009kww.2 InParanoid:Q3TCH7 OMA:DREVPEY OrthoDB:EOG42FSH0
ChiTaRS:CUL4A NextBio:353901 Bgee:Q3TCH7 CleanEx:MM_CUL4A
Genevestigator:Q3TCH7 GermOnline:ENSMUSG00000031446 Uniprot:Q3TCH7
Length = 759
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 198/555 (35%), Positives = 289/555 (52%)
Query: 182 AMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDR-VSHYLHSSSEPKLLEKVQH 240
+ML D Y ++ E +C L A E + +DR V YL+ S K LE+
Sbjct: 219 SMLSDLQVYKDSFELKFLEETNC----LYAAEGQRLMQDREVPEYLNHVS--KRLEEEAD 272
Query: 241 ELLSVYANQLLEKEHSGC--HALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAE 298
+++ Y + +K C LL + L + R D ++ +++ +
Sbjct: 273 RVIT-YLDHSTQKPLIACVEKQLLGEHLTAILQKGLEHLLDENRVPD-LTQMYQLFSRVK 330
Query: 299 GTALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSL 357
G L + K V+ + ++ V+ +++ DK V CFQ + F +
Sbjct: 331 GGQHALLQHWSEYIKTFGTTIVINPEKDKDMVQDLLDFKDKVDHVVEVCFQRNERFINLM 390
Query: 358 KEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKD 417
KE+FE F NK + AEL+A D+ L+ G E +DE +E +L+K++ L +I KD
Sbjct: 391 KESFETFINK--RPNKPAELIAKHVDSKLRAGNKEA-TDEELERILDKIMILFRFIHGKD 447
Query: 418 LFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 477
+F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++
Sbjct: 448 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVH 507
Query: 478 FEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRK 537
F++++ N P IDLTV +LT G+WP+Y +++LP EMV+ EVF+ FY K RK
Sbjct: 508 FKQHMQNQSAPGP-IDLTVNILTMGYWPTYTPMEVHLPPEMVRLQEVFKTFYLGKHSGRK 566
Query: 538 LTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVR 597
L W +LG L F+ E V+ +Q LL+FN D S+ EI + D ++ R
Sbjct: 567 LQWQTTLGHAVLKADFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRR 626
Query: 598 LLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXX 653
L SL+C K ++L K P K + D F FN+ F K+ RIKI
Sbjct: 627 TLQSLACGKARVLIKSPKGKEVEDGDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTE 686
Query: 654 XXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDY 713
R+Y IDA+IVRIMK RK LGH LV E QL KP +KKRIE LI RDY
Sbjct: 687 RVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDY 744
Query: 714 LERDKSNPNMFRYLA 728
+ERDK +PN + Y+A
Sbjct: 745 MERDKDSPNQYHYVA 759
Score = 291 (107.5 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 83/334 (24%), Positives = 171/334 (51%)
Query: 65 VLPSIREKHDEFM-LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTC 122
+LP + D + L+++ W +H + + F +LDR ++ + S LP + ++GL
Sbjct: 118 ILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLEL 177
Query: 123 FRDLVYTE--LNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFE 180
FR+ + ++ + K D ++ LI +ER GE +DR+LL+++L + + + Y++ FE
Sbjct: 178 FRNHIISDRMVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSM-----LSDLQVYKDSFE 232
Query: 181 TAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQH 240
L++T Y+ + + + P+Y+ + L+ E DRV YL S++ L+ V+
Sbjct: 233 LKFLEETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDHSTQKPLIACVEK 292
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGT 300
+LL + +L+K G LL +++V DL++M++LFS++ G + + +++ GT
Sbjct: 293 QLLGEHLTAILQK---GLEHLLDENRVPDLTQMYQLFSRVKGGQHALLQHWSEYIKTFGT 349
Query: 301 ALVKLAEDAASNKKAEKRDVVGLQEQV--FVRKVIELHDKYLAYVNDCFQNHTLFHKSLK 358
+V E K +D++ +++V V + +++++ + + F+ T +K
Sbjct: 350 TIVINPE----KDKDMVQDLLDFKDKVDHVVEVCFQRNERFINLMKESFE--TFINKRPN 403
Query: 359 EAFEVFC----NKGVAGSSSA--ELLATFCDNIL 386
+ E+ +K AG+ A E L D I+
Sbjct: 404 KPAELIAKHVDSKLRAGNKEATDEELERILDKIM 437
>ZFIN|ZDB-GENE-041008-208 [details] [associations]
symbol:cul4b "cullin 4B" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-041008-208 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX004980
IPI:IPI00637421 Ensembl:ENSDART00000085295 ArrayExpress:F1R029
Bgee:F1R029 Uniprot:F1R029
Length = 885
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 193/555 (34%), Positives = 293/555 (52%)
Query: 182 AMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHE 241
+ML D Y + LE++ Y + + L +E++ V YLH + K LE+
Sbjct: 344 SMLSDLQIYQDSFEQRF-LEETNRLYAAEGQR-LMQERE-VPEYLHHVN--KRLEEEADR 398
Query: 242 LLSVYANQLLEKEHSGC--HALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
+++ Y +Q +K LL + L + R + +S +++ G
Sbjct: 399 VIT-YLDQSTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENR-IQDLSLLYQLFSRVRG 456
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLK 358
V L K V+ + ++ V+++++ DK ++ CF + F +K
Sbjct: 457 GVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDVCFMKNEKFVNGMK 516
Query: 359 EAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISD-KD 417
EAFE F NK + AEL+A + D+ L+ G E +DE +E+ML+K++ + +I + KD
Sbjct: 517 EAFETFINK--RPNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYEGKD 573
Query: 418 LFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 477
+F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++
Sbjct: 574 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQ 633
Query: 478 FEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRK 537
F++++ N I+LTV +LT G+WP+Y +++LPAEMV+ E+F+ FY K RK
Sbjct: 634 FKQHMQCQ-NIPGNIELTVNILTMGYWPTYVPMEVHLPAEMVRLQEIFKTFYLGKHSGRK 692
Query: 538 LTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVR 597
L W +LG C L +F+ EL V+ +Q LL+FN + S +I + D ++ R
Sbjct: 693 LQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLATGIEDSELRR 752
Query: 598 LLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXX 653
L SL+C K ++L K P +K + D F N F K+ RIKI
Sbjct: 753 TLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQASTTE 812
Query: 654 XXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDY 713
R+Y IDA+IVRIMK RK L H LV E QL KP +KKRIE LI RDY
Sbjct: 813 RVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDY 870
Query: 714 LERDKSNPNMFRYLA 728
+ERDK NPN + Y+A
Sbjct: 871 MERDKENPNQYNYVA 885
Score = 295 (108.9 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 65/229 (28%), Positives = 131/229 (57%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTELN--GK 134
L+++ K W +H + + F +LDR ++ + S LP + ++GL FR + ++L K
Sbjct: 257 LKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSK 316
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI++ER GE +DR+LL+++L + + + Y++ FE L++T Y+ +
Sbjct: 317 TIDGILLLIERERSGEAVDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRLYAAE 371
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE 254
+ E P+Y+ + L+ E DRV YL S++ L+ V+ +LL + +L+K
Sbjct: 372 GQRLMQEREVPEYLHHVNKRLEEEADRVITYLDQSTQKSLIATVEKQLLGEHLTAILQK- 430
Query: 255 HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALV 303
G + LL +++++DLS +++LFS++ G+ + + +++ A G+ +V
Sbjct: 431 --GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIV 477
>MGI|MGI:1918995 [details] [associations]
symbol:Cul2 "cullin 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0030891
"VCB complex" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1918995 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0030163 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:AK016520 EMBL:AK160597 EMBL:BC026779 EMBL:BC027428
EMBL:BC025902 IPI:IPI00387216 IPI:IPI00387217 RefSeq:NP_083678.2
UniGene:Mm.291707 UniGene:Mm.443148 ProteinModelPortal:Q9D4H8
SMR:Q9D4H8 IntAct:Q9D4H8 STRING:Q9D4H8 PhosphoSite:Q9D4H8
PaxDb:Q9D4H8 PRIDE:Q9D4H8 Ensembl:ENSMUST00000025073
Ensembl:ENSMUST00000162301 GeneID:71745 KEGG:mmu:71745
UCSC:uc008dxz.2 InParanoid:Q9D4H8 NextBio:334387 Bgee:Q9D4H8
CleanEx:MM_CUL2 Genevestigator:Q9D4H8 GermOnline:ENSMUSG00000024231
Uniprot:Q9D4H8
Length = 745
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 189/632 (29%), Positives = 318/632 (50%)
Query: 114 PLNEVG---LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMG 170
PL E+G L +R L+ L + ++ I +R GE ++ ++ V++ FV +
Sbjct: 135 PLMEIGELALDMWRKLMVEPLQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQY 194
Query: 171 Q----MDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL 226
+ + +Y+ F + L +T YY ++ASN + E +C YM K LK E+ R YL
Sbjct: 195 KKKFPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYL 254
Query: 227 HSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDP 286
H SS K++ + Q +++ + Q L HS CH++++ ++ D++ M+ L + GL
Sbjct: 255 HPSSYTKVIHECQQRMVADHL-QFL---HSECHSIIQQERKNDMANMYVLLRAVSSGLPH 310
Query: 287 VSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDC 346
+ ++H+ EG A SN E + FV V+E+H K++ +N
Sbjct: 311 MIEELQKHIHDEGLR-------ATSNLTQEHMPTL------FVESVLEVHGKFVQLINTV 357
Query: 347 FQNHTLFHKSLKEAFEVFCNKGVAGS--SSAELLATFCDNILKKGGSEKLSDEAIEEMLE 404
F +L +A N S + ELLA +CDN+LKK ++ +++ +E+ L
Sbjct: 358 LNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKS-AKGMTENEVEDKLT 416
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM 464
+ + YI DKD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M
Sbjct: 417 SFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRM 476
Query: 465 VTDLTLARENQTSFEEYLSNNPNA-NPGIDLTVTVLTTGFWPSYK--SFDLNLPAEMVKC 521
TD++++ + F ++ N + GI + VL G WP + S +P E+ K
Sbjct: 477 YTDMSVSADLNNKFNNFIRNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKS 536
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSY 581
V++F FY RKLTW++ L T + + + +VTTYQ + LL FN+S+ +SY
Sbjct: 537 VQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSY 596
Query: 582 SEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIP 641
E+ +++ ++ + + SL K++N + + I F N F+ K + KI
Sbjct: 597 KELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKIT 654
Query: 642 LP-----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKP 696
P + Y + A+IVRIMK+RKVL H L+ E + Q F P
Sbjct: 655 TSMQKDTPQELEQTRSAVDEDRKMY-LQAAIVRIMKARKVLRHNALIQEVISQSRARFNP 713
Query: 697 DFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
IKK IE LI + Y+ER +++ + + Y+A
Sbjct: 714 SISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
>ZFIN|ZDB-GENE-030131-8032 [details] [associations]
symbol:cul2 "cullin 2" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0001944 "vasculature development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 ZFIN:ZDB-GENE-030131-8032
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009790 GO:GO:0006511
GO:GO:0001944 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX294164
IPI:IPI00998382 Ensembl:ENSDART00000013257 ArrayExpress:F1Q690
Bgee:F1Q690 Uniprot:F1Q690
Length = 764
Score = 740 (265.6 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 189/633 (29%), Positives = 315/633 (49%)
Query: 114 PLNEVG---LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMG 170
PL E+G L +R L+ L + ++ I +R GE ++ ++ V++ FV +
Sbjct: 154 PLMEIGELALDMWRKLMIEPLQPMLIGKLLKEIKNDRCGEDPNQKVIHGVINSFVHVEQY 213
Query: 171 Q----MDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL 226
+ + +Y+ FE L T YY ++ASN + E +C YM K LK E+ R YL
Sbjct: 214 KKKFPLKFYQEIFEGPFLTKTGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEVRCRKYL 273
Query: 227 HSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDP 286
H SS K++ + Q +++ + Q L H C ++R +K +D++ M+ L + GL
Sbjct: 274 HPSSYSKVIHECQQRMVADHL-QFL---HGECQNIIRQEKRDDMANMYTLLRAVSSGLPH 329
Query: 287 VSNIFKQHVTAEGT-ALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVND 345
+ + H+ EG A + L+++ N +FV V+E+H K++ +N
Sbjct: 330 MIQELQVHIHDEGIRATINLSQE---NMPT-----------LFVESVLEVHSKFVQLINT 375
Query: 346 CFQNHTLFHKSLKEAFEVFCNKGVAGS--SSAELLATFCDNILKKGGSEKLSDEAIEEML 403
F +L +A N S + ELLA +CDN+LKK ++ +++ +E+ L
Sbjct: 376 VLNGDQHFMSALDKALTSVVNYREPKSICKAPELLAKYCDNLLKKS-AKGMTENEVEDKL 434
Query: 404 EKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEG 463
+ + YI DKD+F + Y + LA+RL+ S + D E +++ KLKQ CG +FTSK+
Sbjct: 435 TSFITVFKYIDDKDVFQKIYARMLAKRLIHGLSLSMDSEEAMINKLKQACGYEFTSKLHR 494
Query: 464 MVTDLTLARENQTSFEEYLSNNPNA-NPGIDLTVTVLTTGFWP--SYKSFDLNLPAEMVK 520
M TD++++ + F ++ + GI + VL G WP S +P E+ K
Sbjct: 495 MYTDMSVSTDLNNKFNNFIKTQETVVDLGISFQIYVLQAGAWPLTHVPSSTFAIPQELEK 554
Query: 521 CVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLS 580
V++F FY RKLTW++ L T + + S+ +VTTYQ + LL FN+S+ +S
Sbjct: 555 SVQMFELFYNQHFSGRKLTWLHYLCTGEVKMNYLSKPYVAVVTTYQMAVLLAFNNSETVS 614
Query: 581 YSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKI 640
Y E+ +++ ++ + + SL K+++ + + I P F FT K + KI
Sbjct: 615 YKELQDSTQMNEKELQKTIKSL--LDVKMISHDLQKEEIEPESTFSLIMSFTSKRTKFKI 672
Query: 641 PLP-----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFK 695
P + Y + A+IVRIMK+RKVL H L+ E + Q F
Sbjct: 673 TTSMQKDTPQELEQTRSAVDEDRKMY-LQAAIVRIMKARKVLRHNALIQEVINQSKARFN 731
Query: 696 PDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
P IKK IE LI + Y+ER +S+ + + Y+A
Sbjct: 732 PSISMIKKCIEVLIDKQYIERSQSSADEYSYVA 764
Score = 37 (18.1 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 85 WSNHKVMVRWLSRFFHYLDRYFIARRSL 112
W + ++ + YL+ FI + L
Sbjct: 110 WEEYSKGAEYMDCLYRYLNTQFIKKNKL 137
>UNIPROTKB|F1N829 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:VMLDYVE EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00822359
Ensembl:ENSGALT00000011487 ArrayExpress:F1N829 Uniprot:F1N829
Length = 747
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 189/634 (29%), Positives = 317/634 (50%)
Query: 114 PLNEVG---LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMG 170
PL E+G L +R L+ L + ++ I +R GE ++ ++ V++ FV +
Sbjct: 135 PLMEIGELALDMWRKLMIEPLQAILIRMLLREIKNDRCGEDPNQKVIHGVINSFVHVEQY 194
Query: 171 Q----MDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL 226
+ + +Y+ FE L +T YY ++ASN + E +C YM K LK E+ R YL
Sbjct: 195 KKKLPLKFYQEIFECPFLNETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEMRCRKYL 254
Query: 227 HSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDP 286
H SS K++ + Q +++ + Q L H+ CH ++R +K D++ M+ L + GL
Sbjct: 255 HPSSYGKVIHECQQRMVADHL-QFL---HAECHNIIRQEKRNDMANMYTLLRAVSSGLPH 310
Query: 287 VSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDC 346
+ + H+ EG A SN E + Q FV V+E+H K++ +N
Sbjct: 311 MIQELQNHIHDEGLR-------ATSNLSQEN-----MPTQ-FVESVLEVHSKFVQLINTV 357
Query: 347 FQNHTLFHKSLKEAFEVFCN----KGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEM 402
F +L +A N K + + LA +CDN+LKK ++ +++ +E+
Sbjct: 358 LNGDQHFMSALDKALTSVVNYREPKSICKAPELLELAKYCDNLLKKS-AKGMTENEVEDK 416
Query: 403 LEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKME 462
L + + YI DKD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+
Sbjct: 417 LTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLH 476
Query: 463 GMVTDLTLARENQTSFEEYLSNNPNA-NPGIDLTVTVLTTGFWPSYK--SFDLNLPAEMV 519
M TD++++ + F ++ N + GI + VL G WP + S +P E+
Sbjct: 477 RMYTDMSVSADLNNKFNNFIKNQDTIIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELE 536
Query: 520 KCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRL 579
K V++F FY RKLTW++ L T + + + +VTTYQ + LL FN+S+ +
Sbjct: 537 KSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLCKPYVAMVTTYQMAVLLAFNNSETV 596
Query: 580 SYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIK 639
SY E+ +++ ++ + + SL K++N + + + + F N F+ K + K
Sbjct: 597 SYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSDKEDVEAESTFSLNMNFSSKRTKFK 654
Query: 640 IPLP-----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMF 694
I P + Y + A+IVRIMK+RKVL H L+ E + Q F
Sbjct: 655 ITTSMQKDTPQEMEQTRSAVDEDRKMY-LQAAIVRIMKARKVLRHNALIQEVISQSRARF 713
Query: 695 KPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
P IKK IE LI + Y+ER +++ + + Y+A
Sbjct: 714 NPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 747
>POMBASE|SPAC17G6.12 [details] [associations]
symbol:cul1 "cullin 1" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC17G6.12 GO:GO:0005829 GO:GO:0007346
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049 GO:GO:0019005
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY
OrthoDB:EOG4W3WW4 EMBL:AB016896 EMBL:AB027897 PIR:T37844 PIR:T43398
RefSeq:NP_594259.1 ProteinModelPortal:O13790 IntAct:O13790
MINT:MINT-3377010 STRING:O13790 EnsemblFungi:SPAC17G6.12.1
GeneID:2542393 KEGG:spo:SPAC17G6.12 NextBio:20803452 Uniprot:O13790
Length = 767
Score = 720 (258.5 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 197/683 (28%), Positives = 335/683 (49%)
Query: 73 HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS------LPPLNEVGLTCFRDL 126
H+E L K W+ R+++ F YL+RY++ ++ + + + L +
Sbjct: 107 HEE-QLAAYAKYWTRFTTSARFINHLFGYLNRYWVKLKNRFTETLVYDIYTLCLVSWHHH 165
Query: 127 VYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDY-------YENDF 179
V++ + + ++ + ++R E D ++ +D + + D Y+ F
Sbjct: 166 VFSHIRDSLLQNLLYMFTKKRLYEPTDMKYVEVCVDSITSLSFDKTDMTKPNLSSYKTFF 225
Query: 180 ETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQ 239
ET +++T +Y++++S ++ S DY+ KAE L E++ V YLH S+ LLE +
Sbjct: 226 ETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTLKPLLEATE 285
Query: 240 HELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
L++ + L H+ +L + ED+ RM+RL S+ P GL P+ F++ V G
Sbjct: 286 DVLIAQHEEVL----HNDFARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFEEFVKRSG 341
Query: 300 TALV-KLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLK 358
A V K+ + ++ ++ ++ + VN F T F KSL
Sbjct: 342 FAAVAKIVPQVGGEADVDPKE--------YMEMLLSTYKASKELVNTAFHGDTDFTKSLD 393
Query: 359 EAFEVFCNKGV----AGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYIS 414
AF N+ V + S S ELLA + D+IL+K D+ +E+ L ++ + Y+
Sbjct: 394 TAFRELVNRNVVCQRSSSRSPELLAKYADSILRKSNKNVDIDD-VEDCLSSIIIIFRYVE 452
Query: 415 DKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAREN 474
DKD+F FY K LA+RL+ S + D E S+L+KLK+ CG ++TSK++ M D++L++E
Sbjct: 453 DKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEI 512
Query: 475 QTSFEEYLSNNPNANPG-IDLTVTVLTTGFWP-SYKSFDLNLPAEMVKCVEVFREFYQTK 532
+F + P + G ID + VL T FWP S + + +LP E+V E F+ +Y +
Sbjct: 513 TEAFWQL----PQSRAGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYYYSC 568
Query: 533 TKHRKLTWIYSLGTCNLLGKFESRT--TELI-VTTYQASALLLFNSSDRLSYSEIMTQLN 589
RKL+W++ L + + +T T + V+TYQ LLL+N D +Y E+
Sbjct: 569 HNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITG 628
Query: 590 LSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLP----PX 645
LS D + +L+ AK +L N K P ++ N F K R+++ LP
Sbjct: 629 LSTDFLTGILNIFLKAKVLLLGD--NDKLGDPNSTYKINENFRMKKIRVQLNLPIRSEQK 686
Query: 646 XXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRI 705
R+ + ++IVRIMK+R+ L H LV E ++Q+ F P IK+ I
Sbjct: 687 QESLETHKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCI 746
Query: 706 EDLITRDYLERDKSNPNMFRYLA 728
+ LI ++YLER + + YLA
Sbjct: 747 DMLIEKEYLERQGRDE--YIYLA 767
Score = 49 (22.3 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 6 RKTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYT 47
+K L W+F++ G+++ I E L E ++ YM LYT
Sbjct: 15 KKYDSLNGTWDFLKTGVSQ---IFERLDEGMTITK-YMELYT 52
>ASPGD|ASPL0000052453 [details] [associations]
symbol:culD species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043494 "CLRC ubiquitin ligase complex"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031048
"chromatin silencing by small RNA" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0045836 "positive regulation of meiosis" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0031507 "heterochromatin assembly" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:BN001308 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176712 OMA:FEDSLDF EnsemblFungi:CADANIAT00002720
Uniprot:C8VRE7
Length = 880
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 202/681 (29%), Positives = 339/681 (49%)
Query: 80 ELVKRWSNHKVMVRWLSRFFHYLDRYFIAR-RSLPPLNEVGLTCFRDLVYTE--LNGKVR 136
E K W + + VRW+ F+YLD+ F+ + P + E+GL FR +Y++ L K+
Sbjct: 231 EAWKEWQSMLITVRWI---FYYLDQSFLLHSKEHPVIREMGLQQFRQHIYSDPTLQEKIL 287
Query: 137 DAVITLIDQEREGEQ---IDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSR 193
L+ +R E D +LL+N +++F +D Y + FE ++ + ++S
Sbjct: 288 QGACDLVSADRSDENGIVADSSLLRNAIELF-----HSLDVYVSGFEPVLVSGSKDFFSL 342
Query: 194 KASNWILEDSC---PDYMLKAEECLKREKDRVSHY-LHSSSEPKLLEKVQHELLSVYANQ 249
W +++ Y+ + ++RE +R + + +++ KL E + L++ +
Sbjct: 343 ----WAQQEATGYLASYVENSHRLIEREMNRCEQFSFNRTTKQKLSESLDQTLVTDQESV 398
Query: 250 LL-EKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALV--KLA 306
LL +K+ G LLR L +++ L + G + F ++ EGT +V +
Sbjct: 399 LLSQKDVLG---LLRIGNKIALGQLYTLLERRDLGAK-LKGAFSTYIVEEGTGIVFDESE 454
Query: 307 EDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAY-VNDCFQNHTLFHKSLKEAFEVFC 365
D + K+ + + + F R ++ L + + + F++ +K K
Sbjct: 455 ADMVVRLLSFKKQLDDIWNESFRR------NEGLGHALRESFES--FMNKGRKSD----A 502
Query: 366 NKGVAGSSSAELLATFCDNILKKGG-------SEK--LSDE--AIEEMLEKVVKLLAYIS 414
G + E++A + D +L+ G +E L+DE I L++V+ L ++
Sbjct: 503 TGGTDNPKTGEMIAKYVDRLLRGGWRLAPTREAENMPLADEDAEINRQLDQVLDLFRFVH 562
Query: 415 DKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAREN 474
K +F FY+ LARRLL +SA+DD E+S+L +LK +CG FT +E M D+ +AR+
Sbjct: 563 GKAVFEAFYKNDLARRLLMGRSASDDAEKSMLARLKTECGSSFTHNLESMFKDMEVARDE 622
Query: 475 QTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTK 534
+++ P +DL V+VL+ WP+Y + +P E+ + F +FY TK
Sbjct: 623 MSAYNSIKRERQTPLP-VDLHVSVLSASAWPTYPDVQVRIPPEIATAISDFEKFYDTKYN 681
Query: 535 HRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNS---SDRLSYSEIMTQLNLS 591
RKL W + L C L +F + EL+V+++QA LLLFN L+Y +I LS
Sbjct: 682 GRKLAWKHQLAHCQLRARFPNGNKELVVSSFQAIVLLLFNELPEGGTLNYRQIQEATTLS 741
Query: 592 DDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKI---PLPPXXXX 648
D ++ R L SL+CAKY++L+K+P + +SPTD F +N+ FTD RIKI L
Sbjct: 742 DQELTRTLQSLACAKYRVLSKKPKGRDVSPTDEFSYNASFTDPKFRIKINQIQLKETKEE 801
Query: 649 XXXXXXXXXX-RRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIED 707
R Y A+IVRIMKSRK + H +LV E ++ + IKK IE
Sbjct: 802 NKTTHERVAADRHYETQAAIVRIMKSRKTITHAELVAEVIKATRSRGVLEPADIKKNIEK 861
Query: 708 LITRDYLERDKSNPNMFRYLA 728
LI +DY+ER+ N ++Y+A
Sbjct: 862 LIEKDYMEREDGN--RYQYVA 880
>TAIR|locus:2200670 [details] [associations]
symbol:CUL3 "AT1G26830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0009639 "response to red or far
red light" evidence=RCA;IMP] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI] [GO:0009960 "endosperm development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0009639
GO:GO:0009911 GO:GO:0006511 GO:GO:0009960 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC005508 EMBL:AC006535
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
EMBL:AJ319540 EMBL:AJ344252 EMBL:AK230392 IPI:IPI00528089
PIR:A86395 RefSeq:NP_174005.1 UniGene:At.27879
ProteinModelPortal:Q9ZVH4 SMR:Q9ZVH4 DIP:DIP-33568N IntAct:Q9ZVH4
STRING:Q9ZVH4 PaxDb:Q9ZVH4 PRIDE:Q9ZVH4 EnsemblPlants:AT1G26830.1
GeneID:839226 KEGG:ath:AT1G26830 TAIR:At1g26830 InParanoid:Q9ZVH4
KO:K03869 OMA:ATFYGPI PhylomeDB:Q9ZVH4 ProtClustDB:CLSN2912776
Genevestigator:Q9ZVH4 Uniprot:Q9ZVH4
Length = 732
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 202/598 (33%), Positives = 316/598 (52%)
Query: 151 QIDRALLKNVLDIFVEIGMGQM-DYYENDFETAMLKDTA-AYYSRKASNWILEDSCPDYM 208
+I LL +LD+ + +G++ D M D + Y L+ S Y
Sbjct: 150 KIHTRLLNTLLDLVQKERIGEVIDRGLMRNVIKMFMDLGESVYQEDFEKPFLDASSEFYK 209
Query: 209 LKAEECLKREKDRVSHYLHSSSEPKL---LEKVQHELLSVYANQL---LEKEHSGCHALL 262
++++E + E YL SE +L +E+V H L + ++ +EKE H +
Sbjct: 210 VESQEFI--ESCDCGDYL-KKSEKRLTEEIERVAHYLDAKSEEKITSVVEKEMIANH-MQ 265
Query: 263 RDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVG 322
R +E+ + L + L + N+F++ VT LV + + S+ + + +V
Sbjct: 266 RLVHMENSGLVNMLLNDKYEDLGRMYNLFRR-VT---NGLVTVRDVMTSHLREMGKQLVT 321
Query: 323 LQEQV-----FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAEL 377
E+ FV+++++ DKY +N F N F +L +FE F N + S E
Sbjct: 322 DPEKSKDPVEFVQRLLDERDKYDKIINTAFGNDKTFQNALNSSFEYFIN---LNARSPEF 378
Query: 378 LATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSA 437
++ F D+ L+KG + ++D +E +L+KV+ L Y+ +KD+F ++Y++ LA+RLL K+
Sbjct: 379 ISLFVDDKLRKG-LKGITDVDVEVILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTV 437
Query: 438 NDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVT 497
+DD ERS++ KLK +CG QFTSK+EGM TD+ + + F Y ++P + G L V
Sbjct: 438 SDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMRGF--Y-GSHPELSEGPTLIVQ 494
Query: 498 VLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF-ESR 556
VLTTG WP+ + NLPAE+ E FR +Y R+L+W ++GT ++ F + +
Sbjct: 495 VLTTGSWPTQPAVPCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKGQ 554
Query: 557 TTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYK-ILNKEPN 615
EL V+T+Q L+LFN+SDRLSY EI + D+ R L SL+C K K ++ KEP
Sbjct: 555 KHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPAADLKRCLQSLACVKGKNVIKKEPM 614
Query: 616 TKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX-----XXXXXXXXRRYAIDASIVRI 670
+K I D F N KFT K ++KI R+ I+A+IVRI
Sbjct: 615 SKDIGEEDLFVVNDKFTSKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRI 674
Query: 671 MKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
MKSRK+L H ++ E +QL F + IKKRIE LI RD+LERD ++ ++RYLA
Sbjct: 675 MKSRKILDHNNIIAEVTKQLQPRFLANPTEIKKRIESLIERDFLERDSTDRKLYRYLA 732
Score = 436 (158.5 bits), Expect = 2.4e-38, P = 2.4e-38
Identities = 110/385 (28%), Positives = 197/385 (51%)
Query: 12 EQGWEFMQKGITKLKNI-LEGLPEPQFSSEDYMMLYTYLFQPHLVSAFVNILLLVLPS-- 68
++ W+ +++ I ++ N GL + Y M+ + F L + F+ + L
Sbjct: 26 DKTWQILERAIHQIYNQDASGLSFEELYRNAYNMVL-HKFGEKLYTGFIATMTSHLKEKS 84
Query: 69 --IREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDL 126
I L EL K+W+ H + + Y+DR +I ++ +GL +RD
Sbjct: 85 KLIEAAQGGSFLEELNKKWNEHNKALEMIRDILMYMDRTYIESTKKTHVHPMGLNLWRDN 144
Query: 127 V--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAML 184
V +T+++ ++ + ++ L+ +ER GE IDR L++NV+ +F+++G Y+ DFE L
Sbjct: 145 VVHFTKIHTRLLNTLLDLVQKERIGEVIDRGLMRNVIKMFMDLGES---VYQEDFEKPFL 201
Query: 185 KDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLS 244
++ +Y ++ +I C DY+ K+E+ L E +RV+HYL + SE K+ V+ E+++
Sbjct: 202 DASSEFYKVESQEFIESCDCGDYLKKSEKRLTEEIERVAHYLDAKSEEKITSVVEKEMIA 261
Query: 245 VYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVK 304
+ +L+ E+SG +L +DK EDL RM+ LF ++ GL V ++ H+ G LV
Sbjct: 262 NHMQRLVHMENSGLVNMLLNDKYEDLGRMYNLFRRVTNGLVTVRDVMTSHLREMGKQLVT 321
Query: 305 LAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVF 364
E + +D V FV+++++ DKY +N F N F +L +FE F
Sbjct: 322 DPE--------KSKDPVE-----FVQRLLDERDKYDKIINTAFGNDKTFQNALNSSFEYF 368
Query: 365 CNKGVAGSSSAELLATFCDNILKKG 389
N + S E ++ F D+ L+KG
Sbjct: 369 IN---LNARSPEFISLFVDDKLRKG 390
>UNIPROTKB|Q5T2B5 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713
HOVERGEN:HBG106177 EMBL:AL392046 UniGene:Hs.82919 HGNC:HGNC:2552
ChiTaRS:CUL2 IPI:IPI00642151 SMR:Q5T2B5 Ensembl:ENST00000374742
Ensembl:ENST00000374746 Uniprot:Q5T2B5
Length = 706
Score = 656 (236.0 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 182/676 (26%), Positives = 319/676 (47%)
Query: 1 MTMNERKTIDLEQGWEFMQ---KGITKLKNILEGLPEPQFSSEDYMMLYTYLFQPHLVSA 57
M++ R +D ++ W + K + L+ + +FS + Y + Y +P
Sbjct: 1 MSLKPR-VVDFDETWNKLLTTIKAVVMLEYVERATWNDRFS-DIYALCVAYP-EPLGERL 57
Query: 58 FVNILLLVLPSIREKHDEFMLRE---LV---KRWSNHKVMVRWLSRFFHYLDRYFIARRS 111
+ + + +R H + E LV + W + ++ + YL+ FI +
Sbjct: 58 YTETKIFLENHVRHLHKRVLESEEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNK 117
Query: 112 LP---------------PLNEVG---LTCFRDLVYTELNGKVRDAVITLIDQEREGEQID 153
L PL E+G L +R L+ L + ++ I +R GE +
Sbjct: 118 LTEADLQYGYGGVDMNEPLMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPN 177
Query: 154 RALLKNVLDIFVEIGMGQ----MDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYML 209
+ ++ V++ FV + + + +Y+ FE+ L +T YY ++ASN + E +C YM
Sbjct: 178 QKVIHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYME 237
Query: 210 KAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVED 269
K LK E+ R YLH SS K++ + Q +++ + Q L H+ CH ++R +K D
Sbjct: 238 KVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFL---HAECHNIIRQEKKND 293
Query: 270 LSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFV 329
++ M+ L + GL + + H+ EG A SN E + FV
Sbjct: 294 MANMYVLLRAVSTGLPHMIQELQNHIHDEGLR-------ATSNLTQENMPTL------FV 340
Query: 330 RKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGS--SSAELLATFCDNILK 387
V+E+H K++ +N F +L +A N S + ELLA +CDN+LK
Sbjct: 341 ESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLK 400
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
K ++ +++ +E+ L + + YI DKD+F +FY + LA+RL+ S + D E +++
Sbjct: 401 KS-AKGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMIN 459
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNA-NPGIDLTVTVLTTGFWPS 506
KLKQ CG +FTSK+ M TD++++ + F ++ N + GI + VL G WP
Sbjct: 460 KLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPL 519
Query: 507 YK--SFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTT 564
+ S +P E+ K V++F FY RKLTW++ L T + + + +VTT
Sbjct: 520 TQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTT 579
Query: 565 YQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDH 624
YQ + LL FN+S+ +SY E+ +++ ++ + + SL K++N + + I
Sbjct: 580 YQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESS 637
Query: 625 FEFNSKFTDKMRRIKI 640
F N F+ K + KI
Sbjct: 638 FSLNMNFSSKRTKFKI 653
Score = 75 (31.5 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 685 ECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
+ + Q F P IKK IE LI + Y+ER +++ + + Y+A
Sbjct: 663 QVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 706
>RGD|1310644 [details] [associations]
symbol:Cul2 "cullin 2" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030163 "protein catabolic process" evidence=ISO] [GO:0030891
"VCB complex" evidence=IDA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 RGD:1310644
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0030891
IPI:IPI00559025 PRIDE:D4AEE5 Ensembl:ENSRNOT00000021462
UCSC:RGD:1310644 ArrayExpress:D4AEE5 Uniprot:D4AEE5
Length = 706
Score = 646 (232.5 bits), Expect = 2.6e-69, Sum P(2) = 2.6e-69
Identities = 159/539 (29%), Positives = 273/539 (50%)
Query: 114 PLNEVG---LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMG 170
PL E+G L +R L+ L + ++ I +R GE ++ ++ V++ FV +
Sbjct: 135 PLMEIGELALDMWRKLMVEPLQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQY 194
Query: 171 Q----MDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL 226
+ + +Y+ F + L +T YY ++ASN + E +C YM K LK E+ R YL
Sbjct: 195 KKKFPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYL 254
Query: 227 HSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDP 286
H SS K++ + Q +++ + Q L HS CH+++R ++ D++ M+ L + GL
Sbjct: 255 HPSSYTKVIHECQQRMVADHL-QFL---HSECHSIIRHERKNDMANMYVLLRAVSSGLPH 310
Query: 287 VSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDC 346
+ ++H+ EG A SN E + FV V+E+H K++ +N
Sbjct: 311 MIEELQRHIHDEGLR-------ATSNLTQEHMPTL------FVESVLEVHGKFVQLINTV 357
Query: 347 FQNHTLFHKSLKEAFEVFCNKGVAGS--SSAELLATFCDNILKKGGSEKLSDEAIEEMLE 404
F +L +A N S + ELLA +CDN+LKK ++ +++ +E+ L
Sbjct: 358 LNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKS-AKGMTENEVEDKLT 416
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM 464
+ + YI DKD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M
Sbjct: 417 SFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRM 476
Query: 465 VTDLTLARENQTSFEEYLSNNPNA-NPGIDLTVTVLTTGFWPSYK--SFDLNLPAEMVKC 521
TD++++ + F ++ N + GI + VL G WP + S +P E+ K
Sbjct: 477 YTDMSVSADLNNKFNNFIRNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKS 536
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSY 581
V++F FY RKLTW++ L T + + + +VTTYQ + LL FN+S+ +SY
Sbjct: 537 VQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSY 596
Query: 582 SEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKI 640
E+ +++ ++ + + SL K++N + + I F N F+ K + KI
Sbjct: 597 KELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKI 653
Score = 75 (31.5 bits), Expect = 2.6e-69, Sum P(2) = 2.6e-69
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 685 ECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
+ + Q F P IKK IE LI + Y+ER +++ + + Y+A
Sbjct: 663 QVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 706
>RGD|1564494 [details] [associations]
symbol:Cul4b "cullin 4B" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1564494 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
IPI:IPI00362333 PRIDE:D3ZNZ7 Ensembl:ENSRNOT00000003523
UCSC:RGD:1564494 ArrayExpress:D3ZNZ7 Uniprot:D3ZNZ7
Length = 754
Score = 472 (171.2 bits), Expect = 3.6e-69, Sum P(2) = 3.6e-69
Identities = 107/253 (42%), Positives = 137/253 (54%)
Query: 480 EYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLT 539
EY+ N N I+LTV +LT G+WP+Y +++LP EMVK E+F+ FY K RKL
Sbjct: 505 EYMQNQ-NVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQ 563
Query: 540 WIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLL 599
W +LG C L +F+ EL V+ +Q LL+FN + S EI + D ++ R L
Sbjct: 564 WQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTL 623
Query: 600 HSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXXX 655
SL+C K ++L K P K I D F N F K+ RIKI
Sbjct: 624 QSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERV 683
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R+Y IDA+IVRIMK RK L H LV E QL KP +KKRIE LI RDY+E
Sbjct: 684 FQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYME 741
Query: 716 RDKSNPNMFRYLA 728
RDK NPN + Y+A
Sbjct: 742 RDKENPNQYNYIA 754
Score = 293 (108.2 bits), Expect = 3.6e-69, Sum P(2) = 3.6e-69
Identities = 80/326 (24%), Positives = 171/326 (52%)
Query: 72 KHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE 130
K L+++ + W NH + + F +LDR ++ + S LP + ++GL FR + ++
Sbjct: 149 KDTVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISD 208
Query: 131 --LNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTA 188
+ K D ++ LI++ER GE IDR+LL+++L++ + + Y++ FE L++T
Sbjct: 209 QKVQTKTIDGILLLIERERNGEAIDRSLLRSLLNM-----LSDLQIYQDSFEQRFLQETN 263
Query: 189 AYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYAN 248
Y+ + + E P+Y+ + L+ E DR+ YL +++ L+ V+ +LL +
Sbjct: 264 RLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIASVEKQLLGEHLT 323
Query: 249 QLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAED 308
+L+K G ++LL +++++DLS +++LFS++ G+ + + +++ A G+ +V E
Sbjct: 324 AILQK---GLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPE- 379
Query: 309 AASNKKAEKRDVVGLQEQV--FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFC- 365
K ++++ +++V + ++K++ + + F+ T +K + E+
Sbjct: 380 ---KDKTMVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFE--TFINKRPNKPAELIAK 434
Query: 366 ---NKGVAGSSSA--ELLATFCDNIL 386
+K AG+ A E L D I+
Sbjct: 435 YVDSKLRAGNKEATDEELEKMLDKIM 460
Score = 244 (91.0 bits), Expect = 5.2e-64, Sum P(2) = 5.2e-64
Identities = 80/273 (29%), Positives = 138/273 (50%)
Query: 183 MLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHEL 242
ML D Y + L+++ Y + ++ L +E++ V YLH + K LE+ L
Sbjct: 243 MLSDLQIYQDSFEQRF-LQETNRLYAAEGQK-LMQERE-VPEYLHHVN--KRLEEEADRL 297
Query: 243 LSVYANQLLEKE--HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGT 300
++ Y +Q +K S LL + L + R + +S +++ G
Sbjct: 298 IT-YLDQTTQKSLIASVEKQLLGEHLTAILQKGLNSLLDENR-IQDLSLLYQLFSRVRGG 355
Query: 301 ALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKE 359
V L K V+ + ++ V+++++ DK ++ CF + F ++KE
Sbjct: 356 VQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDTCFLKNEKFINAMKE 415
Query: 360 AFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLF 419
AFE F NK + AEL+A + D+ L+ G E +DE +E+ML+K++ + +I KD+F
Sbjct: 416 AFETFINK--RPNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKDVF 472
Query: 420 AEFYRKKLARRLLFDKSANDDHERSILTKLKQQ 452
FY+K LA+RLL KSA+ D E+S+L+KLK +
Sbjct: 473 EAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE 505
>UNIPROTKB|I3L5M8 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000028601 OMA:PRQLRNT Uniprot:I3L5M8
Length = 328
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 143/331 (43%), Positives = 193/331 (58%)
Query: 402 MLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKM 461
ML+K++ + +I KD+F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+
Sbjct: 1 MLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKL 60
Query: 462 EGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKC 521
EGM D+ L+++ F++Y+ N N I+LTV +LT G+WP+Y +++LP EMVK
Sbjct: 61 EGMFKDMELSKDIMIQFKQYMQNQ-NVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKL 119
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSY 581
E+F+ FY K RKL W +LG C L +F+ EL V+ +Q LL+FN + S
Sbjct: 120 QEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSL 179
Query: 582 SEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIP 641
EI + D ++ R L SL+C K ++L K P K I D F N F K+ RIKI
Sbjct: 180 EEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKIN 239
Query: 642 L----PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPD 697
R+Y IDA+IVRIMK RK L H LV E QL KP
Sbjct: 240 QIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP- 298
Query: 698 FKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
+KKRIE LI RDY+ERDK NPN + Y+A
Sbjct: 299 -ADLKKRIESLIDRDYMERDKENPNQYNYIA 328
>FB|FBgn0032956 [details] [associations]
symbol:Cul-2 "Cullin-2" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0007295 "growth of a germarium-derived egg chamber"
evidence=IMP] [GO:0008582 "regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:AE014134 GO:GO:0022008
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0008582 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:35420 KO:K03870 OMA:VMLDYVE EMBL:AY061434
RefSeq:NP_610117.1 RefSeq:NP_724352.1 UniGene:Dm.6467 SMR:Q9V9R2
IntAct:Q9V9R2 MINT:MINT-904022 STRING:Q9V9R2
EnsemblMetazoa:FBtr0085899 EnsemblMetazoa:FBtr0085900 GeneID:35420
KEGG:dme:Dmel_CG1512 UCSC:CG1512-RA FlyBase:FBgn0032956
InParanoid:Q9V9R2 OrthoDB:EOG4HDR8R GenomeRNAi:35420 NextBio:793437
Uniprot:Q9V9R2
Length = 753
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 183/634 (28%), Positives = 314/634 (49%)
Query: 115 LNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGE-QIDR---ALLKNVLDIFVEIG-- 168
+ E+GL +R + L+ ++ ++ I +R +D ++ V+ FVE+
Sbjct: 147 IGELGLDIWRLYMIEYLSSELVRHILEGIAADRASNGTLDHHRVQIINGVIHSFVEVQDY 206
Query: 169 --MGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL 226
G + Y+ FE ML+ + AYY+ +A+ + S +YM + L+ E R +L
Sbjct: 207 KKTGSLKLYQELFEGPMLEASGAYYTDEANKLLHRCSVSEYMQEVIRILEYESRRAQKFL 266
Query: 227 HSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGL-D 285
H SS PKL ++ + + + N L +S C ++ +++ +DL M+ + IP L
Sbjct: 267 HVSSLPKLRKECEEKFI----NDRLGFIYSECREMVSEERRQDLRNMYVVLKPIPDNLKS 322
Query: 286 PVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVND 345
+ F H+ +EG V S K E + FV ++++H KY + D
Sbjct: 323 ELITTFLDHIKSEGLQTV-------SALKGENIHIA------FVENMLKVHHKYQELIAD 369
Query: 346 CFQNHTLFHKSLKEAFEVFCNKGVAGSS---SAELLATFCDNILKKGGSEKLSDEAIEEM 402
F+N +LF +L +A N+ SAE +A +CD +LKK K + I++
Sbjct: 370 VFENDSLFLSALDKACASVINRRPTERQPCRSAEYVAKYCDTLLKKS---KTCEAEIDQK 426
Query: 403 LEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKME 462
L + + YI DKD++ +FY + LA+RL+ ++S + D E ++ +LKQ CG +FT+K+
Sbjct: 427 LTNNITIFKYIEDKDVYQKFYSRLLAKRLIHEQSQSMDAEEGMINRLKQACGYEFTNKLH 486
Query: 463 GMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWP--SYKSFDLNLPAEMVK 520
M TD++++ + F +L ++ N + GI+L + VL G WP S + +P E K
Sbjct: 487 RMFTDISVSVDLNNKFNTHLKDS-NVDLGINLAIKVLQAGAWPLGSTQVIPFAVPQEFEK 545
Query: 521 CVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVT--TYQASALLLFNSSDR 578
+++F ++Y RKLTW++ + C+ K IVT TYQ + +LLF + D
Sbjct: 546 SIKMFEDYYHKLFSGRKLTWLHHM--CHGELKLSHLKKSYIVTMQTYQMAIILLFETCDS 603
Query: 579 LSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRI 638
LS EI L L+D+ + H + K+LN +++ ++ E N +T+K +
Sbjct: 604 LSCREIQNTLQLNDETFQK--HMQPIIESKLLNA--SSENLAGETRIELNLDYTNKRTKF 659
Query: 639 KIP--LPPXX--XXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMF 694
KI L R+ + A+IVRIMK+RKVL H L+ E + F
Sbjct: 660 KISSALQKETPQEVEHTINSVDEDRKLFLQAAIVRIMKARKVLKHNALIQEVLSLSKVSF 719
Query: 695 KPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
P+ IKK +E LI + Y+ER ++ + + Y+A
Sbjct: 720 TPNIAMIKKCVESLIDKQYIERTANSGDEYSYMA 753
>UNIPROTKB|F1RUR7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SECINYL EMBL:CU914378
Ensembl:ENSSSCT00000012151 Uniprot:F1RUR7
Length = 510
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 161/524 (30%), Positives = 263/524 (50%)
Query: 215 LKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMF 274
LK E+ R YLH SS K++ + Q +++ + Q L H+ CH ++R +K D++ M+
Sbjct: 8 LKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFL---HAECHNIIRQEKKNDMANMY 63
Query: 275 RLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIE 334
L + GL + + H+ EG A SN E + FV V+E
Sbjct: 64 VLLRAVSTGLPHMIQELQNHIHDEGLR-------ATSNLTQENMPTL------FVESVLE 110
Query: 335 LHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGS--SSAELLATFCDNILKKGGSE 392
+H K++ +N F +L +A N S + ELLA +CDN+LKK ++
Sbjct: 111 VHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKS-AK 169
Query: 393 KLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQ 452
+++ +E+ L + + YI DKD+F +FY + LA+RL+ S + D E +++ KLKQ
Sbjct: 170 GMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQA 229
Query: 453 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNA-NPGIDLTVTVLTTGFWPSYK--S 509
CG +FTSK+ M TD++++ + F ++ N + GI + VL G WP + S
Sbjct: 230 CGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPS 289
Query: 510 FDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASA 569
+P E+ K V++F FY RKLTW++ L T + + + +VTTYQ +
Sbjct: 290 STFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAV 349
Query: 570 LLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNS 629
LL FN+S+ +SY E+ +++ ++ + + SL K++N + + I F N
Sbjct: 350 LLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNM 407
Query: 630 KFTDKMRRIKIPLP-----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVL 684
F+ K + KI P + Y + A+IVRIMK+RKVL H L+
Sbjct: 408 NFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMY-LQAAIVRIMKARKVLRHNALIQ 466
Query: 685 ECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
E + Q F P IKK IE LI + Y+ER +++ + + Y+A
Sbjct: 467 EVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 510
>DICTYBASE|DDB_G0278991 [details] [associations]
symbol:culE "cullin E" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0278991 GenomeReviews:CM000152_GR EMBL:AAFI02000026
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q9JLV5 RefSeq:XP_641893.1
ProteinModelPortal:Q54XF7 PRIDE:Q54XF7 EnsemblProtists:DDB0266744
GeneID:8621819 KEGG:ddi:DDB_G0278991 OMA:AETLMIN Uniprot:Q54XF7
Length = 750
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 174/631 (27%), Positives = 321/631 (50%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIG--MGQMDYYEN 177
L +R+ + L K+ +++ +I +R G + +L + L+ +V++G +++ Y++
Sbjct: 136 LNSWRETAFNPLKNKLSVSLLQIIKNDRTGFSTNLQVLSDSLECYVQLGPEKNKLEIYQS 195
Query: 178 DFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEK 237
FE L++T +Y +++++I ++ +YM +++E +RV+ Y+ S+ KL +
Sbjct: 196 CFEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQYMPISTLEKLTKI 255
Query: 238 VQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTA 297
+ + L+S Y Q K +L +DK DL M+ L S++ L P+ NIF + +
Sbjct: 256 LNNVLISNYKEQFASKFLD----ILIEDKSSDLVMMYSLLSRVNH-LTPLKNIFSDFIKS 310
Query: 298 EGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSL 357
EG L E ++ K+A+++ QV + +++++ ++ + +C+ N T F ++
Sbjct: 311 EG-----LKEIESNLKEAQEKP------QVLISILLKIYSRFNIMIKECYGNDTDFTTAM 359
Query: 358 KEAFEVFCNKGVAG-------SSSAELLATFCDNILKKGGSEKLSDEA-IEEMLEKVVKL 409
++F + N+ A S+ +L+ FCD IL+KG +SDEA +E+ L + V L
Sbjct: 360 DKSFSILVNENPASYDPKKKESNIPVVLSKFCDQILRKG-PHHISDEAELEKKLTEAVCL 418
Query: 410 LAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLT 469
Y+ DKD+F Y+K L++RL+ D SA++D E ++ KLK G + +K+ M+TD+
Sbjct: 419 FKYLPDKDIFMLNYQKMLSKRLVEDLSASEDAETLMINKLKNYQGFDYCTKLTRMITDMR 478
Query: 470 LARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWP---SYKSFDLNLPAEMVKCVEVFR 526
L ++ +F+ +L+ P VLT G W + P+EM+ + F
Sbjct: 479 LCKDININFQNHLNEKSLTLP-YQFNFYVLTNGSWTLTNKQTATPFKPPSEMLSSITYFE 537
Query: 527 EFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSSDRLSYSEIM 585
FY+ + R LT++Y ++ + + + +L T YQ + LL+FN +D+++ I
Sbjct: 538 SFYKKSYQGRVLTFLYDFSRADVDSRQAKGKIYKLTTTAYQMAILLMFNGADKITRFLIN 597
Query: 586 TQLNLSDDDVVRLLHSLSCAKYKILN-KEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPP 644
+ L D+ +RL L+ K I+ EP+ K + F NSKF+ K ++ +
Sbjct: 598 DTIGL-DETSIRL-PLLALIKTGIIECSEPSFKNWNNDTEFTVNSKFSSKKMKVSCNIAV 655
Query: 645 XXXXXXXXXXXXXX--------RRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKP 696
R + + A+IVRIMKS+K + H L +E Q+ + F P
Sbjct: 656 QIGETKQSEGQQTVSEQEIEKERFFKLQAAIVRIMKSKKTMTHNDLTVETTTQVSKWFTP 715
Query: 697 DFKAIKKRIEDLITRDYLERDKS-NPNMFRY 726
AIKK IE LI ++Y+ R NP+ +Y
Sbjct: 716 KITAIKKAIEYLIDQEYIRRTTDDNPSARKY 746
>POMBASE|SPAC3A11.08 [details] [associations]
symbol:pcu4 "cullin 4" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007535 "donor selection" evidence=TAS]
[GO:0008156 "negative regulation of DNA replication" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0030702 "chromatin silencing at centromere" evidence=IMP]
[GO:0031048 "chromatin silencing by small RNA" evidence=IMP]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=IMP] [GO:0031618
"nuclear centromeric heterochromatin" evidence=TAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IGI] [GO:0043494 "CLRC
ubiquitin ligase complex" evidence=IDA] [GO:0045836 "positive
regulation of meiosis" evidence=IGI] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC3A11.08 GO:GO:0005829 EMBL:CU329670
GO:GO:0034613 GenomeReviews:CU329670_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0030466 GO:GO:0000122
GO:GO:0030702 GO:GO:0000070 GO:GO:0006348 GO:GO:0031048
GO:GO:0051570 GO:GO:0004842 GO:GO:0045836 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 GO:GO:0031507
GO:GO:0031618 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0006283
GO:GO:0007535 KO:K10609 GO:GO:0043494 EMBL:AB017029 EMBL:AB027893
PIR:T43408 RefSeq:NP_594195.1 ProteinModelPortal:O14122
IntAct:O14122 STRING:O14122 EnsemblFungi:SPAC3A11.08.1
GeneID:2543116 KEGG:spo:SPAC3A11.08 OMA:EREDNDI OrthoDB:EOG4DNJCJ
NextBio:20804143 Uniprot:O14122
Length = 734
Score = 561 (202.5 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 130/407 (31%), Positives = 220/407 (54%)
Query: 324 QEQVFVRKVIELHDKYL-AYVNDCFQNHTLFHKSLKEAFEVFCN--KGVAGSSSAELLAT 380
++ V++++ H K+L V++ F + ++++AFE F N KG + A L+A
Sbjct: 327 KDDTLVQELLSFH-KFLQVVVDESFLHDETLSYAMRKAFETFINGAKGSQREAPARLIAK 385
Query: 381 FCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDD 440
+ D +L+ G + + ++E+ +++ L YI+ KD+F +Y+ +A+RLL +KSA+
Sbjct: 386 YIDYLLRVG-EQASGGKPLKEVFSEILDLFRYIASKDIFEAYYKLDIAKRLLLNKSASAQ 444
Query: 441 HERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLT 500
+E +L LK+ CG QFT +EGM D+ +++E +SF + + N DL V VL+
Sbjct: 445 NELMLLDMLKKTCGSQFTHSLEGMFRDVNISKEFTSSFRHSKAAH---NLHRDLYVNVLS 501
Query: 501 TGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTEL 560
+WPSY + LP +M + ++ F +FY +K +K++W SLG C + +F EL
Sbjct: 502 QAYWPSYPESHIRLPDDMQQDLDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNKEL 561
Query: 561 IVTTYQASALLLFNS---SDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTK 617
++ +QA LL FN+ + +SY ++ LSD D+ R L SLSCA+ + L P +K
Sbjct: 562 SISLFQACVLLQFNNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCARIRPLVMVPKSK 621
Query: 618 TISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXXXXXXRRYAIDASIVRIMKS 673
SP F N KFTDK+ R+KI R++ + ASIVR+MK
Sbjct: 622 KPSPDTMFYVNEKFTDKLYRVKINQIYLKEERQENSDVQEQVVRDRQFELQASIVRVMKQ 681
Query: 674 RKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSN 720
++ + H LV + + P +K IE L+ ++YLER+ ++
Sbjct: 682 KEKMKHDDLVQYVINNVKDRGIPLVSDVKTAIEKLLEKEYLEREDND 728
Score = 96 (38.9 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 33/169 (19%), Positives = 75/169 (44%)
Query: 85 WSNHKVMVRWLSRFFHYLDRYFIARR-SLPPLNEVGLTCFRDLVYTELNGKVR--DAVIT 141
W+ V + F+Y+D+ F++ P + E+ L+ FR+ + N ++ ++++
Sbjct: 111 WNKWLERVEIVQNIFYYMDKTFLSHHPDYPTIEELSLSLFREKLMAVKNIQIPFLNSLLQ 170
Query: 142 LIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILE 201
+ + D A L++ + + + + + Y + F L + +Y ++S I E
Sbjct: 171 SFENLHSSKSTDHAYLQDAM-----LMLHRTEMYSSVFVPMYLVMLSRFYDTESSQKIQE 225
Query: 202 DSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQL 250
+Y+ A L+RE V + + + E VQ L++ + + L
Sbjct: 226 LPLEEYLEYAMSSLEREDAYVEKFDIVRDKKSIRETVQRCLITSHLDTL 274
>UNIPROTKB|F1SR61 [details] [associations]
symbol:LOC100511787 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0005634 GO:GO:0005794 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0007229 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0007369 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:ATFYGPI
GO:GO:0017145 GO:GO:0001831 EMBL:AEMK01142839 EMBL:CU640472
EMBL:CU915646 Ensembl:ENSSSCT00000017677 Uniprot:F1SR61
Length = 550
Score = 401 (146.2 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 81/227 (35%), Positives = 139/227 (61%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
+++ +++L ++ ++ + F N LF +++ FE F N S S E L+ F D+ LK
Sbjct: 123 YIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLK 179
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + L+++ +E +L+K + L ++ +KD+F +Y++ LARRLL +KS +DD E+++++
Sbjct: 180 KG-VKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS 238
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM D++++ F ++L + G+DLTV VLTTG+WP+
Sbjct: 239 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ 298
Query: 508 KSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ N+P E+FR FY K R+LT + +G+ +L F
Sbjct: 299 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 345
Score = 279 (103.3 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 68/193 (35%), Positives = 104/193 (53%)
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
+G + G +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+
Sbjct: 359 VGGAQVTGS-NTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 417
Query: 604 CAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXX 655
C K ++L KEP +K I F N +FT K+ R+KI
Sbjct: 418 CGKPTQRVLTKEPKSKEIKNGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 477
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL
Sbjct: 478 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 537
Query: 716 RDKSNPNMFRYLA 728
R + ++ Y+A
Sbjct: 538 RTPEDRKVYTYVA 550
Score = 236 (88.1 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 57/196 (29%), Positives = 108/196 (55%)
Query: 194 KASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEK 253
++ ++ E+S Y+ K E + E +RV H L S+E +++ V+ EL+S + ++E
Sbjct: 2 ESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEM 61
Query: 254 EHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNK 313
E+SG +L++ K EDL+ M++LFS++P GL + ++ +G ALV ++
Sbjct: 62 ENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALV--------SE 113
Query: 314 KAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSS 373
+ E ++ V +++ +++L ++ ++ + F N LF +++ FE F N S
Sbjct: 114 EGEGKNPVD-----YIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN---LNSR 165
Query: 374 SAELLATFCDNILKKG 389
S E L+ F D+ LKKG
Sbjct: 166 SPEYLSLFIDDKLKKG 181
Score = 48 (22.0 bits), Expect = 7.9e-22, Sum P(3) = 7.9e-22
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVED-LSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
E LS++ + L+K G L + +VE L + LF + + D +KQH+
Sbjct: 168 EYLSLFIDDKLKKGVKG----LTEQEVETILDKAMVLF-RFMQEKDVFERYYKQHLARRL 222
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ 324
+++D+ N ++ + G Q
Sbjct: 223 LTNKSVSDDSEKNMISKLKTECGCQ 247
Score = 42 (19.8 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF + K+ GSE
Sbjct: 338 SADLNATFYGPVKKEDGSE 356
>WB|WBGene00000841 [details] [associations]
symbol:cul-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006974 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 EMBL:Z77666
PIR:T23474 RefSeq:NP_502412.1 ProteinModelPortal:Q21346 SMR:Q21346
STRING:Q21346 EnsemblMetazoa:K08E7.7 GeneID:178214
KEGG:cel:CELE_K08E7.7 UCSC:K08E7.7 CTD:178214 WormBase:K08E7.7
InParanoid:Q21346 NextBio:900194 Uniprot:Q21346
Length = 729
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 197/718 (27%), Positives = 333/718 (46%)
Query: 35 PQFSSEDYMMLYTYLFQPHLVSAFVNILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRW 94
P+F+SE LY L + + +V + + I + +L + W N K R
Sbjct: 52 PEFASE---FLYKQL--ENYIRTYV---IAIRDRISACSGDELLGKCTIEWDNFKFSTRI 103
Query: 95 LSRFFHYLDRYFIARR------SLPPLNEVGLTCFRDLVYTELNGKVRDAVITLIDQERE 148
+ F YL+R F++++ + + ++ L ++ + K DA++ LI ER
Sbjct: 104 CNCIFQYLNRNFVSKKVEDKNGEIVEIYKLALDIWKAEFFDNFKVKTIDAILELILLERC 163
Query: 149 GEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYM 208
G I+ + +V++ E+ D Y+ FE L T +Y ++ N +++ +YM
Sbjct: 164 GSTINSTHISSVVECLTEL-----DIYKVSFEPQFLDATKLFYKQEVLN--SKETVIEYM 216
Query: 209 LKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVE 268
+ E L +E+ R YL S+ L++ + L+S L+ HS LL K E
Sbjct: 217 ITVENRLFQEEYRSRRYLGPSTNDLLIDSCESILIS----DRLKFLHSEFERLLEARKDE 272
Query: 269 DLSRMFRLFSKIPRGLDPVSNIFKQHVTAEG-TALVKLAEDAASNKKAEKRDVVGLQEQV 327
L+RM+ L ++ GL+ + ++ + EG L +LA+D S K ++
Sbjct: 273 HLTRMYSLCRRVTHGLEDLRVYLEKRILKEGHETLQRLAKD--SGLKTTPKE-------- 322
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVA---------GSSSAELL 378
++ K++E+H+ Y +N F + LF +SL +A + F + SA+ L
Sbjct: 323 YITKLLEVHEIYFNLINKAFDRNALFMQSLDKASKDFIEANAVTMLAPEKHRSTRSADYL 382
Query: 379 ATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSAN 438
A +CD +LKK + K+ DE L+K + +L YIS+KD+F +Y+ + R++ + SA+
Sbjct: 383 ARYCDQLLKK--NSKVQDETA---LDKALTVLKYISEKDVFQLYYQNWFSERIINNSSAS 437
Query: 439 DDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTV 498
DD E +T L G ++T + MV D ++++ T F++ + ID V +
Sbjct: 438 DDAEEKFITNLTATEGLEYTRNLVKMVEDAKISKDLTTEFKDIKTEK-----SIDFNVIL 492
Query: 499 LTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRT 557
TTG WPS + LP E+ ++ F FY R+L W YS + K FE +
Sbjct: 493 QTTGAWPSLDQIKIILPRELSTILKEFDTFYNASHNGRRLNWAYSQCRGEVNSKAFEKKY 552
Query: 558 TELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEP-NT 616
IVT Q L LFN D + +I + ++ ++ SL+ +L + N
Sbjct: 553 V-FIVTASQLCTLYLFNEQDSFTIEQISKAIEMTAKSTSAIVGSLNPVIDPVLVVDKGNE 611
Query: 617 KTISPTDHF-EFNSKFTDKMRRIKIPLPPXXXXXXXXXXXX-----XXRRYAIDASIVRI 670
K P D N+K+ +K R+ + R+Y I A IVRI
Sbjct: 612 KDGYPPDAVVSLNTKYANKKVRVDLTTAIKKATADRETDAVQNTVESDRKYEIKACIVRI 671
Query: 671 MKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
MK+RK L H L+ E + QL F P+ + IK IE LI + Y+ R ++ N++ YLA
Sbjct: 672 MKTRKSLTHTLLINEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSENEHNVYEYLA 729
>TAIR|locus:2025941 [details] [associations]
symbol:AT1G59800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00546899 PIR:A96622 RefSeq:NP_176189.1
UniGene:At.52274 ProteinModelPortal:Q9XIE8 SMR:Q9XIE8
EnsemblPlants:AT1G59800.1 GeneID:842273 KEGG:ath:AT1G59800
TAIR:At1g59800 eggNOG:NOG310081 InParanoid:Q9XIE8 OMA:DECMLRE
PhylomeDB:Q9XIE8 ProtClustDB:CLSN2913533 Genevestigator:Q9XIE8
Uniprot:Q9XIE8
Length = 255
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 123/240 (51%), Positives = 164/240 (68%)
Query: 9 IDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLFQ------PH-LVSAFVNI 61
I E W +Q+G TKL ++EG EP F+ E MM++T ++ P L + +
Sbjct: 7 IKFEVEWSNIQQGFTKLIRMIEGESEPAFNQEIMMMMHTATYRICAYKNPQQLYDKYREL 66
Query: 62 L-----LLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLN 116
+ VLPS+REKHDE MLREL KRW+ HK++VR SR YLD F++++ LP L
Sbjct: 67 IENYAIQTVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYLDDSFLSKKGLPSLR 126
Query: 117 EVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYE 176
EVGL CFRD VY E+ +A++ LI +EREGEQIDR L++NV+D+FVE GMG + YE
Sbjct: 127 EVGLNCFRDQVYREMQSMAAEAILALIHKEREGEQIDRELVRNVIDVFVENGMGTLKKYE 186
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
DFE ML+DTA+YYS KAS WI E+SC DY LK ++CL+RE++RV+HYLH ++EPKL E
Sbjct: 187 EDFERLMLQDTASYYSSKASRWIQEESCLDYTLKPQQCLQRERERVTHYLHPTTEPKLFE 246
>UNIPROTKB|Q6DE95 [details] [associations]
symbol:cul3a "Cullin-3-A" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 EMBL:BC077239
RefSeq:NP_001086652.1 UniGene:Xl.48191 ProteinModelPortal:Q6DE95
SMR:Q6DE95 PRIDE:Q6DE95 GeneID:446487 KEGG:xla:446487 CTD:446487
Xenbase:XB-GENE-974989 GO:GO:0048208 GO:GO:0017145 Uniprot:Q6DE95
Length = 768
Score = 404 (147.3 bits), Expect = 6.7e-60, Sum P(2) = 6.7e-60
Identities = 81/227 (35%), Positives = 139/227 (61%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
+++ +++L ++ ++ + F N LF +++ FE F N S S E L+ F D+ LK
Sbjct: 341 YIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLK 397
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + L+++ +E +L+K + L ++ +KD+F +Y++ LARRLL +KS +DD E+++++
Sbjct: 398 KG-VKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS 456
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM D++++ F ++L + G+DLTV VLTTG+WP+
Sbjct: 457 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQ 516
Query: 508 KSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ N+P E+FR FY K R+LT + +G+ +L F
Sbjct: 517 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 403 (146.9 bits), Expect = 6.2e-60, Sum P(3) = 6.2e-60
Identities = 108/402 (26%), Positives = 208/402 (51%)
Query: 1 MTMNERKTIDLEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAF 58
MTM+E+ + W+ ++ I ++ KN GL F E Y YT + H +
Sbjct: 23 MTMDEKYVNSI---WDLLKNAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGEKLY 74
Query: 59 VNILLLV----LPSIREK-----HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR 109
+ +V + +RE ++ F L+ L + W++H+ + + Y+DR ++ +
Sbjct: 75 TGLREVVTEHLINKVREDVLNSLNNNF-LQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQ 133
Query: 110 RSLPPLNEVGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEI 167
++ + +GL FRD V Y + +R ++ +I +ER+GE +DR ++N + + +
Sbjct: 134 NNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL 193
Query: 168 GMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLH 227
G+ YE DFE L+ +A ++ ++ ++ E+S Y+ K E + E +RV H L
Sbjct: 194 GLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLD 253
Query: 228 SSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPV 287
S+E +++ V+ EL+S + ++E E+SG +L++ K EDL+ M++LFS++P GL +
Sbjct: 254 KSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTM 313
Query: 288 SNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCF 347
++ +G ALV +++ E ++ V +++ +++L ++ ++ + F
Sbjct: 314 CECMSLYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESF 360
Query: 348 QNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
N LF +++ FE F N S S E L+ F D+ LKKG
Sbjct: 361 SNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG 399
Score = 285 (105.4 bits), Expect = 6.2e-60, Sum P(3) = 6.2e-60
Identities = 69/193 (35%), Positives = 104/193 (53%)
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
+G + G +R L V+T+Q + L+LFN+ D+ ++ EI + ++ + ++VR L SL+
Sbjct: 577 VGGAQVTGS-NTRKHILQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLA 635
Query: 604 CAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXX 655
C K ++L KEP +K I F N +FT K+ R+KI
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 716 RDKSNPNMFRYLA 728
R + ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
Score = 49 (22.3 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVED-LSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
E LS++ + L+K G L + +VE L + LF + + D +KQH+
Sbjct: 386 EYLSLFIDDKLKKGVKG----LTEQEVESILDKAMVLF-RFMQEKDVFERYYKQHLARRL 440
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ 324
+++D+ N ++ + G Q
Sbjct: 441 LTNKSVSDDSEKNMISKLKTECGCQ 465
Score = 42 (19.8 bits), Expect = 6.2e-60, Sum P(3) = 6.2e-60
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF + K+ GSE
Sbjct: 556 SADLNATFYGPVKKEDGSE 574
>UNIPROTKB|E1BYQ3 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005827 "polar microtubule" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0008054 "cyclin catabolic process" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0017145 "stem cell
division" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0031463 "Cul3-RING ubiquitin ligase complex" evidence=IEA]
[GO:0035024 "negative regulation of Rho protein signal
transduction" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0043149 "stress fiber assembly" evidence=IEA]
[GO:0048208 "COPII vesicle coating" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0005827
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 EMBL:AADN02024135
IPI:IPI00576031 Ensembl:ENSGALT00000008191 Uniprot:E1BYQ3
Length = 746
Score = 405 (147.6 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 108/402 (26%), Positives = 208/402 (51%)
Query: 1 MTMNERKTIDLEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAF 58
MTM+E+ + W+ ++ I ++ KN GL F E Y YT + H +
Sbjct: 1 MTMDEKYVNSI---WDLLKNAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGEKLY 52
Query: 59 VNILLLV----LPSIREK-----HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR 109
+ +V + +RE ++ F L+ L + W++H+ + + Y+DR ++ +
Sbjct: 53 TGLREVVTEHLINKVREDVLNSLNNNF-LQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQ 111
Query: 110 RSLPPLNEVGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEI 167
++ + +GL FRD V Y + +R ++ +I +ER+GE +DR ++N + + +
Sbjct: 112 NNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL 171
Query: 168 GMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLH 227
G+ YE DFE L+ +A ++ ++ ++ E+S Y+ K E + E +RV H L
Sbjct: 172 GLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLD 231
Query: 228 SSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPV 287
S+E +++ V+ EL+S + ++E E+SG +L++ K EDL+ M++LFS++P GL +
Sbjct: 232 KSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTM 291
Query: 288 SNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCF 347
++ +G ALV +++ E ++ V +++ +++L ++ ++ + F
Sbjct: 292 CECMSSYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESF 338
Query: 348 QNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
N LF +++ FE F N S S E L+ F D+ LKKG
Sbjct: 339 NNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG 377
Score = 404 (147.3 bits), Expect = 2.3e-59, Sum P(2) = 2.3e-59
Identities = 81/227 (35%), Positives = 140/227 (61%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
+++ +++L ++ ++ + F N LF +++ FE F N S S E L+ F D+ LK
Sbjct: 319 YIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLK 375
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + L+++ +E +L+K + L ++ +KD+F +Y++ LARRLL +KS +DD E+++++
Sbjct: 376 KG-VKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS 434
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM D++++ F ++L + + G+DLTV VLTTG+WP+
Sbjct: 435 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQ 494
Query: 508 KSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ N+P E+FR FY K R+LT + +G+ +L F
Sbjct: 495 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 541
Score = 279 (103.3 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 68/193 (35%), Positives = 104/193 (53%)
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
+G + G +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+
Sbjct: 555 VGGAQVTGS-NTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 613
Query: 604 CAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXX 655
C K ++L KEP +K I F N +FT K+ R+KI
Sbjct: 614 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 673
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL
Sbjct: 674 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 733
Query: 716 RDKSNPNMFRYLA 728
R + ++ Y+A
Sbjct: 734 RTPEDRKVYTYVA 746
Score = 48 (22.0 bits), Expect = 7.3e-21, Sum P(3) = 7.3e-21
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVED-LSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
E LS++ + L+K G L + +VE L + LF + + D +KQH+
Sbjct: 364 EYLSLFIDDKLKKGVKG----LTEQEVETILDKAMVLF-RFMQEKDVFERYYKQHLARRL 418
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ 324
+++D+ N ++ + G Q
Sbjct: 419 LTNKSVSDDSEKNMISKLKTECGCQ 443
Score = 42 (19.8 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF + K+ GSE
Sbjct: 534 SADLNATFYGPVKKEDGSE 552
>UNIPROTKB|F1PU58 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 GO:GO:0001831 EMBL:AAEX03014406
ProteinModelPortal:F1PU58 Ensembl:ENSCAFT00000016275 Uniprot:F1PU58
Length = 750
Score = 405 (147.6 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 108/402 (26%), Positives = 208/402 (51%)
Query: 1 MTMNERKTIDLEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAF 58
MTM+E+ + W+ ++ I ++ KN GL F E Y YT + H +
Sbjct: 5 MTMDEKYVNSI---WDLLKNAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGEKLY 56
Query: 59 VNILLLV----LPSIREK-----HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR 109
+ +V + +RE ++ F L+ L + W++H+ + + Y+DR ++ +
Sbjct: 57 TGLREVVTEHLINKVREDVLNSLNNNF-LQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQ 115
Query: 110 RSLPPLNEVGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEI 167
++ + +GL FRD V Y + +R ++ +I +ER+GE +DR ++N + + +
Sbjct: 116 NNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL 175
Query: 168 GMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLH 227
G+ YE DFE L+ +A ++ ++ ++ E+S Y+ K E + E +RV H L
Sbjct: 176 GLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLD 235
Query: 228 SSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPV 287
S+E +++ V+ EL+S + ++E E+SG +L++ K EDL+ M++LFS++P GL +
Sbjct: 236 KSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTM 295
Query: 288 SNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCF 347
++ +G ALV +++ E ++ V +++ +++L ++ ++ + F
Sbjct: 296 CECMSSYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESF 342
Query: 348 QNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
N LF +++ FE F N S S E L+ F D+ LKKG
Sbjct: 343 NNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG 381
Score = 401 (146.2 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 81/227 (35%), Positives = 139/227 (61%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
+++ +++L ++ ++ + F N LF +++ FE F N S S E L+ F D+ LK
Sbjct: 323 YIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLK 379
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + L+++ +E +L+K + L ++ +KD+F +Y++ LARRLL +KS +DD E+++++
Sbjct: 380 KG-VKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS 438
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM D++++ F ++L + G+DLTV VLTTG+WP+
Sbjct: 439 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ 498
Query: 508 KSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ N+P E+FR FY K R+LT + +G+ +L F
Sbjct: 499 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 545
Score = 279 (103.3 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 68/193 (35%), Positives = 104/193 (53%)
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
+G + G +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+
Sbjct: 559 VGGAQVTGS-NTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 617
Query: 604 CAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXX 655
C K ++L KEP +K I F N +FT K+ R+KI
Sbjct: 618 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 677
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL
Sbjct: 678 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 737
Query: 716 RDKSNPNMFRYLA 728
R + ++ Y+A
Sbjct: 738 RTPEDRKVYTYVA 750
Score = 48 (22.0 bits), Expect = 7.6e-21, Sum P(3) = 7.6e-21
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVED-LSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
E LS++ + L+K G L + +VE L + LF + + D +KQH+
Sbjct: 368 EYLSLFIDDKLKKGVKG----LTEQEVETILDKAMVLF-RFMQEKDVFERYYKQHLARRL 422
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ 324
+++D+ N ++ + G Q
Sbjct: 423 LTNKSVSDDSEKNMISKLKTECGCQ 447
Score = 42 (19.8 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF + K+ GSE
Sbjct: 538 SADLNATFYGPVKKEDGSE 556
>RGD|1308190 [details] [associations]
symbol:Cul3 "cullin 3" species:10116 "Rattus norvegicus"
[GO:0000090 "mitotic anaphase" evidence=IEA;ISO] [GO:0000209
"protein polyubiquitination" evidence=ISO;ISS] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001831 "trophectodermal cellular morphogenesis"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
[GO:0005827 "polar microtubule" evidence=IEA;ISO] [GO:0006513
"protein monoubiquitination" evidence=ISO;ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO;ISS] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISO;ISS] [GO:0007369
"gastrulation" evidence=IEA;ISO] [GO:0008054 "cyclin catabolic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0016477 "cell migration" evidence=IEA;ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0017145
"stem cell division" evidence=ISO;ISS] [GO:0030332 "cyclin binding"
evidence=IEA;ISO] [GO:0031208 "POZ domain binding"
evidence=ISO;ISS] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=ISO;ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032467 "positive regulation of cytokinesis"
evidence=ISO;ISS] [GO:0035024 "negative regulation of Rho protein
signal transduction" evidence=IEA;ISO] [GO:0040016 "embryonic
cleavage" evidence=ISO;ISS] [GO:0043149 "stress fiber assembly"
evidence=IEA;ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0048208 "COPII
vesicle coating" evidence=ISO;ISS] [GO:0051322 "anaphase"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:1308190 GO:GO:0005634 GO:GO:0005794
GO:GO:0016477 GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 HOGENOM:HOG000176712
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 HOVERGEN:HBG003619
OrthoDB:EOG4JWVCW GO:GO:0001831 EMBL:BC168969 IPI:IPI00209412
UniGene:Rn.101949 STRING:B5DF89 PRIDE:B5DF89
Ensembl:ENSRNOT00000021528 UCSC:RGD:1308190 Genevestigator:B5DF89
Uniprot:B5DF89
Length = 768
Score = 405 (147.6 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 108/402 (26%), Positives = 208/402 (51%)
Query: 1 MTMNERKTIDLEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAF 58
MTM+E+ + W+ ++ I ++ KN GL F E Y YT + H +
Sbjct: 23 MTMDEKYVNSI---WDLLKNAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGEKLY 74
Query: 59 VNILLLV----LPSIREK-----HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR 109
+ +V + +RE ++ F L+ L + W++H+ + + Y+DR ++ +
Sbjct: 75 TGLREVVTEHLINKVREDVLNSLNNNF-LQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQ 133
Query: 110 RSLPPLNEVGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEI 167
++ + +GL FRD V Y + +R ++ +I +ER+GE +DR ++N + + +
Sbjct: 134 NNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL 193
Query: 168 GMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLH 227
G+ YE DFE L+ +A ++ ++ ++ E+S Y+ K E + E +RV H L
Sbjct: 194 GLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLD 253
Query: 228 SSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPV 287
S+E +++ V+ EL+S + ++E E+SG +L++ K EDL+ M++LFS++P GL +
Sbjct: 254 KSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTM 313
Query: 288 SNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCF 347
++ +G ALV +++ E ++ V +++ +++L ++ ++ + F
Sbjct: 314 CECMSSYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESF 360
Query: 348 QNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
N LF +++ FE F N S S E L+ F D+ LKKG
Sbjct: 361 NNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG 399
Score = 401 (146.2 bits), Expect = 5.0e-59, Sum P(2) = 5.0e-59
Identities = 81/227 (35%), Positives = 139/227 (61%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
+++ +++L ++ ++ + F N LF +++ FE F N S S E L+ F D+ LK
Sbjct: 341 YIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLK 397
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + L+++ +E +L+K + L ++ +KD+F +Y++ LARRLL +KS +DD E+++++
Sbjct: 398 KG-VKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS 456
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM D++++ F ++L + G+DLTV VLTTG+WP+
Sbjct: 457 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ 516
Query: 508 KSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ N+P E+FR FY K R+LT + +G+ +L F
Sbjct: 517 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 280 (103.6 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 68/193 (35%), Positives = 104/193 (53%)
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
+G + G +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+
Sbjct: 577 VGGAQVTGS-NTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 604 CAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXX 655
C K ++L KEP +K I F N +FT K+ R+KI
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 716 RDKSNPNMFRYLA 728
R + ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
Score = 48 (22.0 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVED-LSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
E LS++ + L+K G L + +VE L + LF + + D +KQH+
Sbjct: 386 EYLSLFIDDKLKKGVKG----LTEQEVETILDKAMVLF-RFMQEKDVFERYYKQHLARRL 440
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ 324
+++D+ N ++ + G Q
Sbjct: 441 LTNKSVSDDSEKNMISKLKTECGCQ 465
Score = 42 (19.8 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF + K+ GSE
Sbjct: 556 SADLNATFYGPVKKEDGSE 574
>ZFIN|ZDB-GENE-030131-3376 [details] [associations]
symbol:cul3a "cullin 3a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-3376 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03869 HOVERGEN:HBG003619 EMBL:AY423034
IPI:IPI00921732 RefSeq:NP_955985.1 UniGene:Dr.75956
ProteinModelPortal:Q6TEL5 SMR:Q6TEL5 STRING:Q6TEL5 GeneID:324655
KEGG:dre:324655 CTD:324655 InParanoid:Q6TEL5 NextBio:20808899
ArrayExpress:Q6TEL5 Uniprot:Q6TEL5
Length = 766
Score = 405 (147.6 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 82/227 (36%), Positives = 139/227 (61%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
+++ +++L ++ ++ + F N LF +++ FE F N S S E L+ F D+ LK
Sbjct: 339 YIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLK 395
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + L+++ +E +L+K + L ++ +KD+F +Y++ LARRLL +KS +DD E+++++
Sbjct: 396 KG-VKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS 454
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM D++++ F +L + + G+DLTV VLTTG+WP+
Sbjct: 455 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRHHLQTSQVSLCGVDLTVRVLTTGYWPTQ 514
Query: 508 KSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ N+P EVFR FY K R+LT + +G+ +L F
Sbjct: 515 SATPKCNIPPSPRHAFEVFRRFYLAKHSGRQLTLQHHMGSADLNATF 561
Score = 400 (145.9 bits), Expect = 5.9e-59, Sum P(3) = 5.9e-59
Identities = 107/401 (26%), Positives = 206/401 (51%)
Query: 1 MTMNERKTIDLEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAF 58
MTM+E+ ++ W+ ++ I ++ KN GL F E Y YT + H +
Sbjct: 21 MTMDEKYVNNI---WDLLKNAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGEKLY 72
Query: 59 VNILLLV----LPSIREK--H--DEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARR 110
+ +V + +RE H + L+ L + W++H+ + + Y+DR ++ +
Sbjct: 73 TGLREVVTEHLINKVREDVLHSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQN 132
Query: 111 SLPPLNEVGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIG 168
++ + +GL FRD V Y + +R ++ +I +ER+GE +DR ++N + + +G
Sbjct: 133 NVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMVLG 192
Query: 169 MGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHS 228
+ YE DFE L +A ++ ++ ++ E+S Y+ K E + E +RV H L
Sbjct: 193 LKGRSVYEEDFEIPFLDMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDK 252
Query: 229 SSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVS 288
S+E +++ V+ EL+S + ++E E+SG +L++ K EDL+ M++LF ++P GL +
Sbjct: 253 STEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFGRVPNGLKTMC 312
Query: 289 NIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQ 348
++ +G ALV +++ E ++ V +++ +++L ++ ++ + F
Sbjct: 313 ECMSWYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESFN 359
Query: 349 NHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
N LF +++ FE F N S S E L+ F D+ LKKG
Sbjct: 360 NDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG 397
Score = 281 (104.0 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 68/188 (36%), Positives = 102/188 (54%)
Query: 549 LLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAK-- 606
LL +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+C K
Sbjct: 579 LLTGSNTRKHILQVSTFQMTILMLFNNREKFTFEEIQQETDIPERELVRALQSLACGKPT 638
Query: 607 YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXXXXXRR 660
++L KEP +K I F N +FT K+ R+KI R+
Sbjct: 639 QRVLTKEPKSKEIESGHVFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRK 698
Query: 661 YAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSN 720
+ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL R +
Sbjct: 699 HEIEAAIVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPED 758
Query: 721 PNMFRYLA 728
++ Y+A
Sbjct: 759 RKVYTYVA 766
Score = 49 (22.3 bits), Expect = 6.5e-21, Sum P(3) = 6.5e-21
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVED-LSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
E LS++ + L+K G L + +VE L + LF + + D +KQH+
Sbjct: 384 EYLSLFIDDKLKKGVKG----LTEQEVESILDKAMVLF-RFMQEKDVFERYYKQHLARRL 438
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ 324
+++D+ N ++ + G Q
Sbjct: 439 LTNKSVSDDSEKNMISKLKTECGCQ 463
Score = 40 (19.1 bits), Expect = 5.9e-59, Sum P(3) = 5.9e-59
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF I K+ GS+
Sbjct: 554 SADLNATFYGPIKKEDGSD 572
>UNIPROTKB|Q6GPF3 [details] [associations]
symbol:cul3b "Cullin-3-B" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 GO:GO:0048208
GO:GO:0017145 EMBL:BC073186 RefSeq:NP_001085677.1 UniGene:Xl.71281
ProteinModelPortal:Q6GPF3 SMR:Q6GPF3 PRIDE:Q6GPF3 GeneID:444103
KEGG:xla:444103 CTD:444103 Xenbase:XB-GENE-6256683 Uniprot:Q6GPF3
Length = 768
Score = 405 (147.6 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 81/227 (35%), Positives = 139/227 (61%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
+++ +++L ++ ++ + F N LF +++ FE F N S S E L+ F D+ LK
Sbjct: 341 YIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLK 397
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + L+++ +E +L+K + L ++ +KD+F +Y++ LARRLL +KS +DD E+++++
Sbjct: 398 KG-VKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS 456
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM D++++ F ++L + G+DLTV VLTTG+WP+
Sbjct: 457 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQ 516
Query: 508 KSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ N+P E+FR FY K R+LT + +G+ +L F
Sbjct: 517 SATPKCNIPPSPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 403 (146.9 bits), Expect = 1.6e-59, Sum P(3) = 1.6e-59
Identities = 108/402 (26%), Positives = 208/402 (51%)
Query: 1 MTMNERKTIDLEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAF 58
MTM+E+ + W+ ++ I ++ KN GL F E Y YT + H +
Sbjct: 23 MTMDEKYVNSI---WDLLKNAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGEKLY 74
Query: 59 VNILLLV----LPSIREK-----HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR 109
+ +V + +RE ++ F L+ L + W++H+ + + Y+DR ++ +
Sbjct: 75 TGLREVVTEHLINKVREDVLNSLNNNF-LQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQ 133
Query: 110 RSLPPLNEVGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEI 167
++ + +GL FRD V Y + +R ++ +I +ER+GE +DR ++N + + +
Sbjct: 134 NNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL 193
Query: 168 GMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLH 227
G+ YE DFE L+ +A ++ ++ ++ E+S Y+ K E + E +RV H L
Sbjct: 194 GLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLD 253
Query: 228 SSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPV 287
S+E +++ V+ EL+S + ++E E+SG +L++ K EDL+ M++LFS++P GL +
Sbjct: 254 KSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTM 313
Query: 288 SNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCF 347
++ +G ALV +++ E ++ V +++ +++L ++ ++ + F
Sbjct: 314 CECMSLYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESF 360
Query: 348 QNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
N LF +++ FE F N S S E L+ F D+ LKKG
Sbjct: 361 SNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG 399
Score = 281 (104.0 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 68/193 (35%), Positives = 104/193 (53%)
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
+G + G +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+
Sbjct: 577 VGGAQVTGS-NTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 604 CAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXX 655
C K ++L KEP +K I F N +FT K+ R+KI
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 716 RDKSNPNMFRYLA 728
R + ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
Score = 49 (22.3 bits), Expect = 4.1e-21, Sum P(3) = 4.1e-21
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVED-LSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
E LS++ + L+K G L + +VE L + LF + + D +KQH+
Sbjct: 386 EYLSLFIDDKLKKGVKG----LTEQEVESILDKAMVLF-RFMQEKDVFERYYKQHLARRL 440
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ 324
+++D+ N ++ + G Q
Sbjct: 441 LTNKSVSDDSEKNMISKLKTECGCQ 465
Score = 42 (19.8 bits), Expect = 1.6e-59, Sum P(3) = 1.6e-59
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF + K+ GSE
Sbjct: 556 SADLNATFYGAVKKEDGSE 574
>UNIPROTKB|E1BIN5 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 KO:K03869 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 CTD:8452 GO:GO:0001831
EMBL:DAAA02006055 EMBL:DAAA02006056 EMBL:DAAA02006057
EMBL:DAAA02006058 EMBL:DAAA02006059 IPI:IPI00712202
RefSeq:NP_001179735.1 UniGene:Bt.64031 PRIDE:E1BIN5
Ensembl:ENSBTAT00000029018 GeneID:534325 KEGG:bta:534325
NextBio:20876357 Uniprot:E1BIN5
Length = 768
Score = 405 (147.6 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 108/402 (26%), Positives = 208/402 (51%)
Query: 1 MTMNERKTIDLEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAF 58
MTM+E+ + W+ ++ I ++ KN GL F E Y YT + H +
Sbjct: 23 MTMDEKYVNSI---WDLLKNAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGEKLY 74
Query: 59 VNILLLV----LPSIREK-----HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR 109
+ +V + +RE ++ F L+ L + W++H+ + + Y+DR ++ +
Sbjct: 75 TGLREVVTEHLINKVREDVLNSLNNNF-LQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQ 133
Query: 110 RSLPPLNEVGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEI 167
++ + +GL FRD V Y + +R ++ +I +ER+GE +DR ++N + + +
Sbjct: 134 NNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL 193
Query: 168 GMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLH 227
G+ YE DFE L+ +A ++ ++ ++ E+S Y+ K E + E +RV H L
Sbjct: 194 GLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLD 253
Query: 228 SSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPV 287
S+E +++ V+ EL+S + ++E E+SG +L++ K EDL+ M++LFS++P GL +
Sbjct: 254 KSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTM 313
Query: 288 SNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCF 347
++ +G ALV +++ E ++ V +++ +++L ++ ++ + F
Sbjct: 314 CECMSSYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESF 360
Query: 348 QNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
N LF +++ FE F N S S E L+ F D+ LKKG
Sbjct: 361 NNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG 399
Score = 401 (146.2 bits), Expect = 6.4e-59, Sum P(2) = 6.4e-59
Identities = 81/227 (35%), Positives = 139/227 (61%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
+++ +++L ++ ++ + F N LF +++ FE F N S S E L+ F D+ LK
Sbjct: 341 YIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLK 397
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + L+++ +E +L+K + L ++ +KD+F +Y++ LARRLL +KS +DD E+++++
Sbjct: 398 KG-VKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS 456
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM D++++ F ++L + G+DLTV VLTTG+WP+
Sbjct: 457 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ 516
Query: 508 KSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ N+P E+FR FY K R+LT + +G+ +L F
Sbjct: 517 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 279 (103.3 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 68/193 (35%), Positives = 104/193 (53%)
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
+G + G +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+
Sbjct: 577 VGGAQVTGS-NTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 604 CAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXX 655
C K ++L KEP +K I F N +FT K+ R+KI
Sbjct: 636 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 716 RDKSNPNMFRYLA 728
R + ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
Score = 48 (22.0 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVED-LSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
E LS++ + L+K G L + +VE L + LF + + D +KQH+
Sbjct: 386 EYLSLFIDDKLKKGVKG----LTEQEVETILDKAMVLF-RFMQEKDVFERYYKQHLARRL 440
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ 324
+++D+ N ++ + G Q
Sbjct: 441 LTNKSVSDDSEKNMISKLKTECGCQ 465
Score = 42 (19.8 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF + K+ GSE
Sbjct: 556 SADLNATFYGPVKKEDGSE 574
>UNIPROTKB|A4IHP4 [details] [associations]
symbol:cul3 "Cullin-3" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000090 "mitotic anaphase" evidence=ISS]
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0005827 "polar
microtubule" evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0005827
HOGENOM:HOG000176712 KO:K03869 GO:GO:0048208 GO:GO:0017145 CTD:8452
OrthoDB:EOG4JWVCW EMBL:BC135616 RefSeq:NP_001015975.2
UniGene:Str.1179 ProteinModelPortal:A4IHP4 SMR:A4IHP4 STRING:A4IHP4
GeneID:548729 KEGG:xtr:548729 Xenbase:XB-GENE-974982 Bgee:A4IHP4
Uniprot:A4IHP4
Length = 768
Score = 404 (147.3 bits), Expect = 1.8e-59, Sum P(2) = 1.8e-59
Identities = 81/227 (35%), Positives = 139/227 (61%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
+++ +++L ++ ++ + F N LF +++ FE F N S S E L+ F D+ LK
Sbjct: 341 YIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLK 397
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + L+++ +E +L+K + L ++ +KD+F +Y++ LARRLL +KS +DD E+++++
Sbjct: 398 KG-VKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS 456
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM D++++ F ++L + G+DLTV VLTTG+WP+
Sbjct: 457 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQ 516
Query: 508 KSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ N+P E+FR FY K R+LT + +G+ +L F
Sbjct: 517 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 403 (146.9 bits), Expect = 1.6e-59, Sum P(3) = 1.6e-59
Identities = 108/402 (26%), Positives = 208/402 (51%)
Query: 1 MTMNERKTIDLEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAF 58
MTM+E+ + W+ ++ I ++ KN GL F E Y YT + H +
Sbjct: 23 MTMDEKYVNSI---WDLLKNAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGEKLY 74
Query: 59 VNILLLV----LPSIREK-----HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR 109
+ +V + +RE ++ F L+ L + W++H+ + + Y+DR ++ +
Sbjct: 75 TGLREVVTEHLINKVREDVLNSLNNNF-LQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQ 133
Query: 110 RSLPPLNEVGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEI 167
++ + +GL FRD V Y + +R ++ +I +ER+GE +DR ++N + + +
Sbjct: 134 NNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL 193
Query: 168 GMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLH 227
G+ YE DFE L+ +A ++ ++ ++ E+S Y+ K E + E +RV H L
Sbjct: 194 GLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLD 253
Query: 228 SSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPV 287
S+E +++ V+ EL+S + ++E E+SG +L++ K EDL+ M++LFS++P GL +
Sbjct: 254 KSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTM 313
Query: 288 SNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCF 347
++ +G ALV +++ E ++ V +++ +++L ++ ++ + F
Sbjct: 314 CECMSLYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESF 360
Query: 348 QNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
N LF +++ FE F N S S E L+ F D+ LKKG
Sbjct: 361 SNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG 399
Score = 281 (104.0 bits), Expect = 1.6e-59, Sum P(3) = 1.6e-59
Identities = 68/193 (35%), Positives = 104/193 (53%)
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
+G + G +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+
Sbjct: 577 VGGAQVTGS-NTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 604 CAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXX 655
C K ++L KEP +K I F N +FT K+ R+KI
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 716 RDKSNPNMFRYLA 728
R + ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
Score = 49 (22.3 bits), Expect = 4.1e-21, Sum P(3) = 4.1e-21
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVED-LSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
E LS++ + L+K G L + +VE L + LF + + D +KQH+
Sbjct: 386 EYLSLFIDDKLKKGVKG----LTEQEVESILDKAMVLF-RFMQEKDVFERYYKQHLARRL 440
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ 324
+++D+ N ++ + G Q
Sbjct: 441 LTNKSVSDDSEKNMISKLKTECGCQ 465
Score = 42 (19.8 bits), Expect = 1.6e-59, Sum P(3) = 1.6e-59
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF + K+ GSE
Sbjct: 556 SADLNATFYGPVKKEDGSE 574
>MGI|MGI:1347360 [details] [associations]
symbol:Cul3 "cullin 3" species:10090 "Mus musculus"
[GO:0000090 "mitotic anaphase" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005827 "polar microtubule" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007369 "gastrulation" evidence=IMP]
[GO:0008054 "cyclin catabolic process" evidence=ISS] [GO:0016055
"Wnt receptor signaling pathway" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016477 "cell
migration" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017145 "stem cell division" evidence=IMP]
[GO:0030332 "cyclin binding" evidence=IPI] [GO:0031208 "POZ domain
binding" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032467 "positive regulation of
cytokinesis" evidence=ISO] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=ISO] [GO:0040016 "embryonic
cleavage" evidence=IMP] [GO:0043149 "stress fiber assembly"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0048208 "COPII vesicle
coating" evidence=ISO] [GO:0051322 "anaphase" evidence=ISO]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
MGI:MGI:1347360 GO:GO:0005634 GO:GO:0005794 GO:GO:0016477
GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0040016 GO:GO:0000910 GO:GO:0007229 GO:GO:0035024
GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0007369 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145
CTD:8452 HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW ChiTaRS:CUL3
GO:GO:0001831 EMBL:AF129738 EMBL:BC027304 IPI:IPI00467383
RefSeq:NP_057925.1 UniGene:Mm.12665 PDB:1IUY PDBsum:1IUY
ProteinModelPortal:Q9JLV5 SMR:Q9JLV5 IntAct:Q9JLV5 STRING:Q9JLV5
PhosphoSite:Q9JLV5 PaxDb:Q9JLV5 PRIDE:Q9JLV5
Ensembl:ENSMUST00000163119 GeneID:26554 KEGG:mmu:26554
InParanoid:Q9JLV5 EvolutionaryTrace:Q9JLV5 NextBio:304599
Bgee:Q9JLV5 CleanEx:MM_CUL3 Genevestigator:Q9JLV5
GermOnline:ENSMUSG00000004364 Uniprot:Q9JLV5
Length = 768
Score = 402 (146.6 bits), Expect = 2.8e-59, Sum P(3) = 2.8e-59
Identities = 108/402 (26%), Positives = 208/402 (51%)
Query: 1 MTMNERKTIDLEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAF 58
MTM+E+ + W+ ++ I ++ KN GL F E Y YT + H +
Sbjct: 23 MTMDEKYVNSI---WDLLKNAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGEKLY 74
Query: 59 VNILLLV----LPSIREK-----HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR 109
+ +V + +RE ++ F L+ L + W++H+ + + Y+DR ++ +
Sbjct: 75 TGLREVVTEHLINKVREDVLNSLNNNF-LQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQ 133
Query: 110 RSLPPLNEVGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEI 167
++ + +GL FRD V Y + +R ++ +I +ER+GE +DR ++N + + +
Sbjct: 134 NNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL 193
Query: 168 GMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLH 227
G+ YE DFE L+ +A ++ ++ ++ E+S Y+ K E + E +RV H L
Sbjct: 194 GLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLD 253
Query: 228 SSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPV 287
S+E +++ V+ EL+S + ++E E+SG +L++ K EDL+ M++LFS++P GL +
Sbjct: 254 KSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTM 313
Query: 288 SNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCF 347
++ +G ALV +++ E ++ V +++ +++L ++ ++ + F
Sbjct: 314 CECMSCYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESF 360
Query: 348 QNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
N LF +++ FE F N S S E L+ F D+ LKKG
Sbjct: 361 NNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG 399
Score = 401 (146.2 bits), Expect = 5.0e-59, Sum P(2) = 5.0e-59
Identities = 81/227 (35%), Positives = 139/227 (61%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
+++ +++L ++ ++ + F N LF +++ FE F N S S E L+ F D+ LK
Sbjct: 341 YIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLK 397
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + L+++ +E +L+K + L ++ +KD+F +Y++ LARRLL +KS +DD E+++++
Sbjct: 398 KG-VKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS 456
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM D++++ F ++L + G+DLTV VLTTG+WP+
Sbjct: 457 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ 516
Query: 508 KSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ N+P E+FR FY K R+LT + +G+ +L F
Sbjct: 517 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 280 (103.6 bits), Expect = 2.8e-59, Sum P(3) = 2.8e-59
Identities = 68/193 (35%), Positives = 104/193 (53%)
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
+G + G +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+
Sbjct: 577 VGGAQVTGS-NTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 604 CAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXX 655
C K ++L KEP +K I F N +FT K+ R+KI
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 716 RDKSNPNMFRYLA 728
R + ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
Score = 48 (22.0 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVED-LSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
E LS++ + L+K G L + +VE L + LF + + D +KQH+
Sbjct: 386 EYLSLFIDDKLKKGVKG----LTEQEVETILDKAMVLF-RFMQEKDVFERYYKQHLARRL 440
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ 324
+++D+ N ++ + G Q
Sbjct: 441 LTNKSVSDDSEKNMISKLKTECGCQ 465
Score = 42 (19.8 bits), Expect = 2.8e-59, Sum P(3) = 2.8e-59
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF + K+ GSE
Sbjct: 556 SADLNATFYGPVKKEDGSE 574
>ASPGD|ASPL0000014731 [details] [associations]
symbol:culC species:162425 "Emericella nidulans"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:BN001302 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
OMA:ATFYGPI EnsemblFungi:CADANIAT00004755 Uniprot:C8V637
Length = 823
Score = 411 (149.7 bits), Expect = 4.7e-59, Sum P(2) = 4.7e-59
Identities = 121/432 (28%), Positives = 209/432 (48%)
Query: 175 YENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKL 234
Y FE L+ +AA+Y + + + + EK+R + + SE K+
Sbjct: 230 YLTSFEPDYLEASAAFYRAEGKRLLETVDAATFCAVVSARIAEEKERCQYTISLLSESKI 289
Query: 235 LEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKI-PRGLDPVSNIFKQ 293
E V +EL+ +++ E +G +L D++++LS+++ L +++ P+ + + K+
Sbjct: 290 KEIVDNELIRNNLAEVVNFEGTGVRVMLDHDRIDNLSKIYALSARVDPKKTHLTAAVQKR 349
Query: 294 HVT------------AEGTALVK-LAEDAASNKKAEKRDVVG--LQEQV-FVRKVIELHD 337
V A+ A K DA K+ EK V + +V ++ L
Sbjct: 350 IVEMGNEINNASFALAQAPAQPKSTGTDAGQKKEKEKEKPVNQVTSSAIKWVDDILALKK 409
Query: 338 KYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDE 397
K+ D F + + ++ +F F N + S+E L+ F D LKKG K +D
Sbjct: 410 KFDGIWKDAFGSDQVLQSAITASFSSFLN---STPRSSEFLSLFFDENLKKGVKGK-TDN 465
Query: 398 AIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQF 457
++ +LE + LL YI DKD F +Y+K L+RRLL +S + D ER +++K+K + G QF
Sbjct: 466 EVDALLENGITLLRYIKDKDRFEAYYKKHLSRRLLMKRSMSMDAERQMISKMKMEVGNQF 525
Query: 458 TSKMEGMVTDLTLARENQTSFEEYLSNNPNANPG-IDLTVTVLTTGFWP-----SYKSFD 511
T ++E M D+T++ + S+++++ + + +L + VLT+ WP S +
Sbjct: 526 TQRLEAMFRDMTISEDLTASYKQFVREQGDPDKKRFELDINVLTSTMWPMEIMSSSRDGQ 585
Query: 512 LNLPAEMVKCVEV----FREFYQTKTKHRKLTWIYSLGTCNLLGKFES-----RTTELIV 562
+ LP + K VE F +FY K RKL+W S+GT ++ F + EL V
Sbjct: 586 VELPCIIPKEVETVKQSFEKFYLDKHSGRKLSWQPSMGTADIKATFHRSNGKVQRHELNV 645
Query: 563 TTYQASALLLFN 574
+TY LLLFN
Sbjct: 646 STYAMFILLLFN 657
Score = 271 (100.5 bits), Expect = 4.7e-59, Sum P(2) = 4.7e-59
Identities = 66/182 (36%), Positives = 97/182 (53%)
Query: 559 ELIVTTYQASALLLFNS---SDRLSYSEIMTQLNLSDDDVVRLLHSLSCA-KYKILNKEP 614
EL V+TY LLLFN + L++ EI + + D+D++R L SL+ A K ++L K P
Sbjct: 642 ELNVSTYAMFILLLFNDIPIGESLTFEEIQARTRIPDNDLIRNLQSLAVAPKTRVLKKVP 701
Query: 615 NTKTISPTDHFEFNSKFTDKMRRIKI--------PLPPXXXXXXXXXXXXXXRRYAIDAS 666
++ + PTD F FN+ F +++I + R +I+A+
Sbjct: 702 MSRDVKPTDKFYFNNDFQSPFMKVRIGVVSGGANKVESQDQRKETEEKMNNERGGSIEAA 761
Query: 667 IVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRY 726
IVRIMK RK L H L+ E + QL F PD +K+RIE LI R+YLER +P + Y
Sbjct: 762 IVRIMKQRKTLIHSNLISEVLSQLSARFVPDVNMVKRRIESLIDREYLERVSEDPPTYGY 821
Query: 727 LA 728
+A
Sbjct: 822 VA 823
Score = 178 (67.7 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 75/331 (22%), Positives = 144/331 (43%)
Query: 70 REKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLVY- 128
RE + F L L + W +H++ ++ ++ Y+DR +A R + + + FRD V
Sbjct: 114 RETGERF-LSALSEVWEDHQICMKMITDVLMYMDRV-VALRKVS-IYAAAMALFRDHVLR 170
Query: 129 ----TELNGKVRDA----VITLIDQEREGEQIDRALLKNVLDIF-----VEIGMGQMDYY 175
+ N V D V+ +I ER G IDRAL+ + + + E Y
Sbjct: 171 SPVSSSNNAVVADVLKSTVLFMIQLERSGHMIDRALIHSCIKMLEGLYETEAEEESSKLY 230
Query: 176 ENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLL 235
FE L+ +AA+Y + + + + EK+R + + SE K+
Sbjct: 231 LTSFEPDYLEASAAFYRAEGKRLLETVDAATFCAVVSARIAEEKERCQYTISLLSESKIK 290
Query: 236 EKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKI-PRGLDPVSNIFKQH 294
E V +EL+ +++ E +G +L D++++LS+++ L +++ P+ + + K+
Sbjct: 291 EIVDNELIRNNLAEVVNFEGTGVRVMLDHDRIDNLSKIYALSARVDPKKTHLTAAVQKRI 350
Query: 295 VTAEG---TALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHT 351
V A LA+ A + K+ D +E+ + V ++ + +V+D
Sbjct: 351 VEMGNEINNASFALAQ-APAQPKSTGTDAGQKKEKEKEKPVNQVTSSAIKWVDDILALKK 409
Query: 352 LFHKSLKEAF--EVFCNKGVAGSSSAELLAT 380
F K+AF + + S S+ L +T
Sbjct: 410 KFDGIWKDAFGSDQVLQSAITASFSSFLNST 440
>UNIPROTKB|Q13618 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0001831 "trophectodermal cellular morphogenesis" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=IDA] [GO:0000090 "mitotic anaphase" evidence=IMP]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005827 "polar
microtubule" evidence=IDA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=IMP] [GO:0043149 "stress
fiber assembly" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0006513 "protein monoubiquitination" evidence=IDA] [GO:0048208
"COPII vesicle coating" evidence=IMP] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0040016 "embryonic cleavage"
evidence=ISS] [GO:0032467 "positive regulation of cytokinesis"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0031208 "POZ domain binding" evidence=IDA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005794 Reactome:REACT_6900
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0016477 GO:GO:0000090
GO:GO:0016055 GO:GO:0000082 GO:GO:0008284 EMBL:CH471063
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 GO:GO:0097193
eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632 GO:GO:0007369
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208
GO:GO:0017145 EMBL:AF064087 EMBL:AB014517 EMBL:AF062537
EMBL:AY337761 EMBL:AK291151 EMBL:AC073052 EMBL:AC092679
EMBL:BC031844 EMBL:BC039598 EMBL:BC092409 EMBL:U58089 EMBL:AF052147
IPI:IPI00014312 IPI:IPI00382458 IPI:IPI00382459
RefSeq:NP_001244126.1 RefSeq:NP_001244127.1 RefSeq:NP_003581.1
UniGene:Hs.372286 PDB:4AP2 PDB:4APF PDB:4EOZ PDBsum:4AP2
PDBsum:4APF PDBsum:4EOZ ProteinModelPortal:Q13618 SMR:Q13618
DIP:DIP-31611N IntAct:Q13618 STRING:Q13618 PhosphoSite:Q13618
DMDM:12643396 PaxDb:Q13618 PRIDE:Q13618 Ensembl:ENST00000264414
Ensembl:ENST00000344951 Ensembl:ENST00000409096
Ensembl:ENST00000409777 GeneID:8452 KEGG:hsa:8452 UCSC:uc002vny.2
UCSC:uc010zls.1 CTD:8452 GeneCards:GC02M225298 HGNC:HGNC:2553
HPA:CAB002678 MIM:603136 MIM:614496 neXtProt:NX_Q13618
Orphanet:300530 PharmGKB:PA27049 HOVERGEN:HBG003619
InParanoid:Q13618 OrthoDB:EOG4JWVCW PhylomeDB:Q13618 ChiTaRS:CUL3
GenomeRNAi:8452 NextBio:31630 ArrayExpress:Q13618 Bgee:Q13618
CleanEx:HS_CUL3 Genevestigator:Q13618 GermOnline:ENSG00000036257
GO:GO:0001831 Uniprot:Q13618
Length = 768
Score = 401 (146.2 bits), Expect = 4.7e-59, Sum P(3) = 4.7e-59
Identities = 108/402 (26%), Positives = 207/402 (51%)
Query: 1 MTMNERKTIDLEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAF 58
MTM+E+ + W+ ++ I ++ KN GL F E Y YT + H +
Sbjct: 23 MTMDEKYVNSI---WDLLKNAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGEKLY 74
Query: 59 VNILLLV----LPSIREK-----HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR 109
+ +V + +RE ++ F L+ L + W++H+ + + Y+DR ++ +
Sbjct: 75 TGLREVVTEHLINKVREDVLNSLNNNF-LQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQ 133
Query: 110 RSLPPLNEVGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEI 167
++ + +GL FRD V Y + +R ++ +I +ER+GE +DR ++N + + +
Sbjct: 134 NNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL 193
Query: 168 GMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLH 227
G+ YE DFE L+ +A ++ ++ ++ E+S Y+ K E + E +RV H L
Sbjct: 194 GLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLD 253
Query: 228 SSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPV 287
S+E +++ V+ EL+S + ++E E+SG +L++ K EDL M++LFS++P GL +
Sbjct: 254 KSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSRVPNGLKTM 313
Query: 288 SNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCF 347
++ +G ALV +++ E ++ V +++ +++L ++ ++ + F
Sbjct: 314 CECMSSYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLLESF 360
Query: 348 QNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
N LF +++ FE F N S S E L+ F D+ LKKG
Sbjct: 361 NNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG 399
Score = 398 (145.2 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 81/227 (35%), Positives = 139/227 (61%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
+++ +++L ++ ++ + F N LF +++ FE F N S S E L+ F D+ LK
Sbjct: 341 YIQGLLDLKSRFDRFLLESFNNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLK 397
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + L+++ +E +L+K + L ++ +KD+F +Y++ LARRLL +KS +DD E+++++
Sbjct: 398 KG-VKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS 456
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM D++++ F ++L + G+DLTV VLTTG+WP+
Sbjct: 457 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ 516
Query: 508 KSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ N+P E+FR FY K R+LT + +G+ +L F
Sbjct: 517 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 279 (103.3 bits), Expect = 4.7e-59, Sum P(3) = 4.7e-59
Identities = 68/193 (35%), Positives = 104/193 (53%)
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
+G + G +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+
Sbjct: 577 VGGAQVTGS-NTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 604 CAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXX 655
C K ++L KEP +K I F N +FT K+ R+KI
Sbjct: 636 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 716 RDKSNPNMFRYLA 728
R + ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
Score = 48 (22.0 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVED-LSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
E LS++ + L+K G L + +VE L + LF + + D +KQH+
Sbjct: 386 EYLSLFIDDKLKKGVKG----LTEQEVETILDKAMVLF-RFMQEKDVFERYYKQHLARRL 440
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ 324
+++D+ N ++ + G Q
Sbjct: 441 LTNKSVSDDSEKNMISKLKTECGCQ 465
Score = 42 (19.8 bits), Expect = 4.7e-59, Sum P(3) = 4.7e-59
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF + K+ GSE
Sbjct: 556 SADLNATFYGPVKKEDGSE 574
Score = 37 (18.1 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 44/187 (23%), Positives = 74/187 (39%)
Query: 126 LVYTELNGKVR-DAVITLIDQEREGEQIDRALLKNVLD--IFVEIGMGQMDYYENDFETA 182
LV E GK D + L+D + + DR LL++ + +F + G +Y+ N +
Sbjct: 328 LVSEEGEGKNPVDYIQGLLDLK---SRFDRFLLESFNNDRLFKQTIAGDFEYFLN-LNSR 383
Query: 183 MLKDTAAYYS---RKASNWILEDSCPDYMLKAEECLK--REKDRVSHYLHSSSEPKLL-- 235
+ + + +K + E + KA + +EKD Y +LL
Sbjct: 384 SPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTN 443
Query: 236 EKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHV 295
+ V + ++L K GC K+E MFR S +D F+QH+
Sbjct: 444 KSVSDDSEKNMISKL--KTECGCQFT---SKLEG---MFRDMSISNTTMDE----FRQHL 491
Query: 296 TAEGTAL 302
A G +L
Sbjct: 492 QATGVSL 498
>ZFIN|ZDB-GENE-081007-1 [details] [associations]
symbol:cul3b "cullin 3b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-081007-1 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW EMBL:BC163249 IPI:IPI00481059
RefSeq:NP_001177414.1 UniGene:Dr.150567 STRING:B3DIU1 GeneID:572370
KEGG:dre:572370 CTD:572370 NextBio:20890938 ArrayExpress:B3DIU1
Uniprot:B3DIU1
Length = 766
Score = 405 (147.6 bits), Expect = 6.3e-59, Sum P(3) = 6.3e-59
Identities = 108/402 (26%), Positives = 209/402 (51%)
Query: 1 MTMNERKTIDLEQGWEFMQKGITKL--KNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAF 58
MTM+E+ ++ W+ ++ I ++ KN GL F E Y YT + H +
Sbjct: 22 MTMDEKYVNNI---WDLLKNAIQEIQRKNN-SGL---SFE-ELYRNAYTMVLHKHGEKLY 73
Query: 59 VNILLLV----LPSIREK-----HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIAR 109
+ +V + +RE ++ F L+ L + W++H+ + + Y+DR ++ +
Sbjct: 74 TGLREVVTEHLINKVREDVLNSLNNNF-LQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQ 132
Query: 110 RSLPPLNEVGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEI 167
++ + +GL FRD V Y + +R ++ +I +ER+GE +DR ++N + + +
Sbjct: 133 NNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMIL 192
Query: 168 GMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLH 227
G+ YE DFE L+ +A ++ ++ ++ E+S Y+ K E + E +RV H L
Sbjct: 193 GLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVIHCLD 252
Query: 228 SSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPV 287
S+E +++ V+ EL+S + ++E E+SG +L++ K EDL+ M++LFS++P GL +
Sbjct: 253 KSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTM 312
Query: 288 SNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCF 347
++ +G ALV +++ E ++ V +++ +++L ++ ++ + F
Sbjct: 313 CECMSSYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESF 359
Query: 348 QNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
N LF +++ FE F N S S E L+ F D+ LKKG
Sbjct: 360 NNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKKG 398
Score = 402 (146.6 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 81/227 (35%), Positives = 140/227 (61%)
Query: 328 FVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILK 387
+++ +++L ++ ++ + F N LF +++ FE F N S S E L+ F D+ LK
Sbjct: 340 YIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLK 396
Query: 388 KGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILT 447
KG + L+++ +E +L+K + L ++ +KD+F +Y++ LARRLL +KS +DD E+++++
Sbjct: 397 KG-VKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS 455
Query: 448 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSY 507
KLK +CG QFTSK+EGM D++++ F ++L++ + G+DL V VLTTG+WP+
Sbjct: 456 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLTSTGVSLGGVDLIVRVLTTGYWPTQ 515
Query: 508 KSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ N+P EVFR FY K R+LT + +G+ +L F
Sbjct: 516 SATPKCNIPPSPRHAFEVFRRFYLAKHSGRQLTLQHHMGSADLNATF 562
Score = 275 (101.9 bits), Expect = 6.3e-59, Sum P(3) = 6.3e-59
Identities = 67/193 (34%), Positives = 104/193 (53%)
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
+G + G +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+
Sbjct: 575 VGGAQVTGS-NTRKHILQVSTFQMTILMLFNNREKSTFEEIQQETDIPERELVRALQSLA 633
Query: 604 CAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXX 655
C K ++L KEP +K I F N +FT ++ R+KI
Sbjct: 634 CGKPTQRVLTKEPKSKEIENGHVFTVNDQFTSRLHRVKIQTVAAKQGESDPERKETRQKV 693
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL
Sbjct: 694 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLA 753
Query: 716 RDKSNPNMFRYLA 728
R + ++ Y+A
Sbjct: 754 RTPEDRKVYTYVA 766
Score = 49 (22.3 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 241 ELLSVYANQLLEKEHSGCHALLRDDKVED-LSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
E LS++ + L+K G L + +VE L + LF + + D +KQH+
Sbjct: 385 EYLSLFIDDKLKKGVKG----LTEQEVESILDKAMVLF-RFMQEKDVFERYYKQHLARRL 439
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ 324
+++D+ N ++ + G Q
Sbjct: 440 LTNKSVSDDSEKNMISKLKTECGCQ 464
Score = 40 (19.1 bits), Expect = 6.3e-59, Sum P(3) = 6.3e-59
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF I K+ GS+
Sbjct: 555 SADLNATFYGPIKKEDGSD 573
Score = 38 (18.4 bits), Expect = 4.1e-19, Sum P(3) = 4.1e-19
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 291 FKQHVTAEGTAL 302
F+QH+T+ G +L
Sbjct: 486 FRQHLTSTGVSL 497
>UNIPROTKB|F1P2W9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00595196
Ensembl:ENSGALT00000038545 ArrayExpress:F1P2W9 Uniprot:F1P2W9
Length = 687
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 145/480 (30%), Positives = 249/480 (51%)
Query: 143 IDQEREGEQIDRALLKNVLDIFVEIGMGQ----MDYYENDFETAMLKDTAAYYSRKASNW 198
++ +R GE ++ ++ V++ FV + + + +Y+ FE L +T YY ++ASN
Sbjct: 195 LEFDRCGEDPNQKVIHGVINSFVHVEQYKKKLPLKFYQEIFECPFLNETGEYYKQEASNL 254
Query: 199 ILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGC 258
+ E +C YM K LK E+ R YLH SS K++ + Q +++ + Q L H+ C
Sbjct: 255 LQESNCSQYMEKVLGRLKDEEMRCRKYLHPSSYGKVIHECQQRMVADHL-QFL---HAEC 310
Query: 259 HALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKR 318
H ++R +K D++ M+ L + GL + + H+ EG A SN E
Sbjct: 311 HNIIRQEKRNDMANMYTLLRAVSSGLPHMIQELQNHIHDEGLR-------ATSNLSQEN- 362
Query: 319 DVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGS--SSAE 376
+ Q FV V+E+H K++ +N F +L +A N S + E
Sbjct: 363 ----MPTQ-FVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSICKAPE 417
Query: 377 LLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKS 436
LLA +CDN+LKK ++ +++ +E+ L + + YI DKD+F +FY + LA+RL+ S
Sbjct: 418 LLAKYCDNLLKKS-AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLS 476
Query: 437 ANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNA-NPGIDLT 495
+ D E +++ KLKQ CG +FTSK+ M TD++++ + F ++ N + GI
Sbjct: 477 MSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTIIDLGISFQ 536
Query: 496 VTVLTTGFWPSYK--SFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ VL G WP + S +P E+ K V++F FY RKLTW++ L T + +
Sbjct: 537 IYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNY 596
Query: 554 ESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKE 613
+ +VTTYQ + LL FN+S+ +SY E+ +++ ++ + + SL K++N +
Sbjct: 597 LCKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHD 654
>CGD|CAL0000107 [details] [associations]
symbol:CDC53 species:5476 "Candida albicans" [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA;ISA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISA;IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] [GO:0006521 "regulation of cellular
amino acid metabolic process" evidence=IMP] [GO:0010570 "regulation
of filamentous growth" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070783 "growth of unicellular organism
as a thread of attached cells" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0003688 "DNA replication
origin binding" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 568 (205.0 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
Identities = 167/691 (24%), Positives = 337/691 (48%)
Query: 66 LPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI------ARRSLPPLNEVG 119
+ +++ +E L V++W+ + +++ F Y++RY++ R+ + +N +
Sbjct: 91 IKNLKRLPNESFLEFYVRKWTRFTIGAVYMNNVFDYMNRYWVQKERSDGRKDVYDVNTLS 150
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLD--IFVEIGMGQMD---- 173
++D ++ + + + ++T I Q+R+ +D L+ + + +F+ I + +
Sbjct: 151 FIKWKDEMFKPNSKLLIEQILTCIQQQRDNMIVDTNLISSAIKSLVFLSIDIQDLKKPNL 210
Query: 174 -YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEP 232
Y N FE L+ T YY+++++ ++ + DYM K E + E R ++YL ++
Sbjct: 211 IIYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKK 270
Query: 233 KLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFK 292
LLE + L+ +AN++ ++ LL ++++ + RM++L +++ + LDP++N +
Sbjct: 271 PLLEVLNAALIEKHANEMYDQ----FLVLLEQNQIDHIQRMYKLLARVQKTLDPLANTLE 326
Query: 293 QHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTL 352
++ E A ++ + A N +A+K+ V + +V+V +I +++++ V F T
Sbjct: 327 LYIKKEAAAALEEIQTQAENSEAKKKIV---EPKVYVHTLISIYNRFNDIVVRAFSKDTK 383
Query: 353 FHKSLKEAFEVFCNKGVAGSS-------SAELLATFCDNILKKGGSEKLSDEAIEEMLEK 405
F KSL A F N + + ELLA + D LK + E +
Sbjct: 384 FIKSLDNACRHFVNNNPIATPKPRSPCRTPELLARYADGFLKSNSKDN------EMNADN 437
Query: 406 VVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMV 465
++ + +I+++D F E YR+ LA+RL+ S +++ E S++ +L+++ ++TSKM M
Sbjct: 438 LMIVFKFIAERDSFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSKMTKMF 497
Query: 466 TDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLN---LPAEMVKCV 522
TD+ + + + F++ + N D + VL WP + S D N L E+ +
Sbjct: 498 TDIKASDDLKIKFKDGM------NVLFDFSPMVLARSTWPFHSSQDYNDLKLAPELKVTI 551
Query: 523 EVFREFYQTKTKHRKLTWIYSLGTCNL---LGKFES-RTTELIVTTYQASALLLFNSSDR 578
+ F+ Y + K +++ W+++ G L L K + + IV+ Q LL +N S
Sbjct: 552 DSFKAMYLQQGKGKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYNYSKT 611
Query: 579 LSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRI 638
+ +++ + + + + H KYK+L +E + I DH+ SK +K+ I
Sbjct: 612 YTLDDLVKIVGIKKELLQN--HVTPFVKYKLLKEEGDQLVI--VDHYP--SK-KNKVSFI 664
Query: 639 -KIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPD 697
I R ++ASIVRIMKS+K + L+ E V Q G F
Sbjct: 665 GAITKTKEEDVEEITKEVQQSRTIFLEASIVRIMKSKKSMAPNNLLNEVVVQAGNRFNAK 724
Query: 698 FKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
+K+ I+ LI ++YL+R N + + Y++
Sbjct: 725 NIDVKRAIDSLIDKEYLKR---NGDDYEYIS 752
Score = 47 (21.6 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 10 DLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
DL W F+Q G L+ IL E ++ YM YT ++
Sbjct: 10 DLNATWTFIQPG---LEYILGAHGEQGVTATVYMNCYTAVY 47
>UNIPROTKB|Q5AJB7 [details] [associations]
symbol:CDC53 "Putative uncharacterized protein CDC53"
species:237561 "Candida albicans SC5314" [GO:0006521 "regulation of
cellular amino acid metabolic process" evidence=IMP] [GO:0010570
"regulation of filamentous growth" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=ISA;IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISA;IMP]
[GO:0070783 "growth of unicellular organism as a thread of attached
cells" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 568 (205.0 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
Identities = 167/691 (24%), Positives = 337/691 (48%)
Query: 66 LPSIREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI------ARRSLPPLNEVG 119
+ +++ +E L V++W+ + +++ F Y++RY++ R+ + +N +
Sbjct: 91 IKNLKRLPNESFLEFYVRKWTRFTIGAVYMNNVFDYMNRYWVQKERSDGRKDVYDVNTLS 150
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLD--IFVEIGMGQMD---- 173
++D ++ + + + ++T I Q+R+ +D L+ + + +F+ I + +
Sbjct: 151 FIKWKDEMFKPNSKLLIEQILTCIQQQRDNMIVDTNLISSAIKSLVFLSIDIQDLKKPNL 210
Query: 174 -YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEP 232
Y N FE L+ T YY+++++ ++ + DYM K E + E R ++YL ++
Sbjct: 211 IIYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKK 270
Query: 233 KLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFK 292
LLE + L+ +AN++ ++ LL ++++ + RM++L +++ + LDP++N +
Sbjct: 271 PLLEVLNAALIEKHANEMYDQ----FLVLLEQNQIDHIQRMYKLLARVQKTLDPLANTLE 326
Query: 293 QHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTL 352
++ E A ++ + A N +A+K+ V + +V+V +I +++++ V F T
Sbjct: 327 LYIKKEAAAALEEIQTQAENSEAKKKIV---EPKVYVHTLISIYNRFNDIVVRAFSKDTK 383
Query: 353 FHKSLKEAFEVFCNKGVAGSS-------SAELLATFCDNILKKGGSEKLSDEAIEEMLEK 405
F KSL A F N + + ELLA + D LK + E +
Sbjct: 384 FIKSLDNACRHFVNNNPIATPKPRSPCRTPELLARYADGFLKSNSKDN------EMNADN 437
Query: 406 VVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMV 465
++ + +I+++D F E YR+ LA+RL+ S +++ E S++ +L+++ ++TSKM M
Sbjct: 438 LMIVFKFIAERDSFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSKMTKMF 497
Query: 466 TDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLN---LPAEMVKCV 522
TD+ + + + F++ + N D + VL WP + S D N L E+ +
Sbjct: 498 TDIKASDDLKIKFKDGM------NVLFDFSPMVLARSTWPFHSSQDYNDLKLAPELKVTI 551
Query: 523 EVFREFYQTKTKHRKLTWIYSLGTCNL---LGKFES-RTTELIVTTYQASALLLFNSSDR 578
+ F+ Y + K +++ W+++ G L L K + + IV+ Q LL +N S
Sbjct: 552 DSFKAMYLQQGKGKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYNYSKT 611
Query: 579 LSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRI 638
+ +++ + + + + H KYK+L +E + I DH+ SK +K+ I
Sbjct: 612 YTLDDLVKIVGIKKELLQN--HVTPFVKYKLLKEEGDQLVI--VDHYP--SK-KNKVSFI 664
Query: 639 -KIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPD 697
I R ++ASIVRIMKS+K + L+ E V Q G F
Sbjct: 665 GAITKTKEEDVEEITKEVQQSRTIFLEASIVRIMKSKKSMAPNNLLNEVVVQAGNRFNAK 724
Query: 698 FKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
+K+ I+ LI ++YL+R N + + Y++
Sbjct: 725 NIDVKRAIDSLIDKEYLKR---NGDDYEYIS 752
Score = 47 (21.6 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 10 DLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLF 50
DL W F+Q G L+ IL E ++ YM YT ++
Sbjct: 10 DLNATWTFIQPG---LEYILGAHGEQGVTATVYMNCYTAVY 47
>WB|WBGene00000837 [details] [associations]
symbol:cul-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0051759 "sister chromosome movement
towards spindle pole involved in meiotic sister chromatid
segregation" evidence=IMP] [GO:0007138 "meiotic anaphase II"
evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0008054 "cyclin catabolic process" evidence=IMP]
[GO:0051232 "meiotic spindle elongation" evidence=IMP] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IMP]
[GO:0008105 "asymmetric protein localization" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 425 (154.7 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 126/434 (29%), Positives = 211/434 (48%)
Query: 102 LDRY--FIARRSLPPLNEVGLTCFR----DLVYTELNGKVRDAVITLIDQEREGEQIDRA 155
LD + + A +P + E+G DLV T L V+ +I ID +R+G A
Sbjct: 199 LDNFAQYAAFLQIPDVKEIGCLALEIWKEDLVKTILPQLVKLLLIA-IDNDRKGNFPHIA 257
Query: 156 L-LKNVLDIFVEIGMGQMD-----------------YYENDFETAMLKDTAAYYSRKASN 197
+ V++ FV++ D +Y+ FE +L DT YYS A
Sbjct: 258 NEVSGVINSFVKMEETDFDVVPAEGARYKARESTTAFYQESFEKPLLTDTEQYYSALAQK 317
Query: 198 WILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSG 257
+ + SC +YM + L++E+ R YLH SS K++ Q ++ + ++L H+
Sbjct: 318 MLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKL----HAV 373
Query: 258 CHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEK 317
CH L+ +++ +DL M+RL I GL + F+++V +G +A S E
Sbjct: 374 CHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEYVKKKGL-------EAVSRLTGEN 426
Query: 318 RDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSS---S 374
+ +Q FV V+ +++K+ F + F L +A + N G S +
Sbjct: 427 -----VPQQ-FVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVNSKEPGQSVPKA 480
Query: 375 AELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFD 434
+E LA + D +LKK ++ LS+ +E L+ + + YI DKD+F +FY K LA RL+
Sbjct: 481 SERLARYTDGLLKKS-TKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLANRLIAS 539
Query: 435 KSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDL 494
S + D E ++ KLKQ CG +FTSK+ M TD+ L++E +F++++++ P +
Sbjct: 540 TSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKTVQPDVKF 599
Query: 495 TVT---VLTTGFWP 505
T +L G WP
Sbjct: 600 VPTQTMILQAGSWP 613
Score = 233 (87.1 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 61/223 (27%), Positives = 105/223 (47%)
Query: 511 DLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASAL 570
+ +LP + ++ F +FY K RKLTW++++ ++ + + + YQ +AL
Sbjct: 633 NFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAAL 692
Query: 571 LLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSK 630
L F D + +I ++ +S D +++ + ++ +L + T N
Sbjct: 693 LCFERRDAILVKDIGEEIGVSGDYLLKTIRTI--LDVTLLTCDDQNLTADSL--VRLNMS 748
Query: 631 FTDKMRRIKIPLPPXXXXX-----XXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLE 685
T K + ++ P R+Y ++ +IVRIMK+RKVL H LV E
Sbjct: 749 MTSKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTE 808
Query: 686 CVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
++Q F PD IKK IEDLI + Y++R N ++YLA
Sbjct: 809 IMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQNDE-YQYLA 850
Score = 47 (21.6 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 75 EFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLN 116
+ +L+E K W ++ R F YL++ F+ ++ L+
Sbjct: 159 DLLLQEYHKMWRVFHEGAIFIHRLFGYLNKQFVKQKRCTDLD 200
>UNIPROTKB|Q17390 [details] [associations]
symbol:cul-2 "Cullin-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 425 (154.7 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 126/434 (29%), Positives = 211/434 (48%)
Query: 102 LDRY--FIARRSLPPLNEVGLTCFR----DLVYTELNGKVRDAVITLIDQEREGEQIDRA 155
LD + + A +P + E+G DLV T L V+ +I ID +R+G A
Sbjct: 199 LDNFAQYAAFLQIPDVKEIGCLALEIWKEDLVKTILPQLVKLLLIA-IDNDRKGNFPHIA 257
Query: 156 L-LKNVLDIFVEIGMGQMD-----------------YYENDFETAMLKDTAAYYSRKASN 197
+ V++ FV++ D +Y+ FE +L DT YYS A
Sbjct: 258 NEVSGVINSFVKMEETDFDVVPAEGARYKARESTTAFYQESFEKPLLTDTEQYYSALAQK 317
Query: 198 WILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSG 257
+ + SC +YM + L++E+ R YLH SS K++ Q ++ + ++L H+
Sbjct: 318 MLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKL----HAV 373
Query: 258 CHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEK 317
CH L+ +++ +DL M+RL I GL + F+++V +G +A S E
Sbjct: 374 CHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEYVKKKGL-------EAVSRLTGEN 426
Query: 318 RDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSS---S 374
+ +Q FV V+ +++K+ F + F L +A + N G S +
Sbjct: 427 -----VPQQ-FVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVNSKEPGQSVPKA 480
Query: 375 AELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFD 434
+E LA + D +LKK ++ LS+ +E L+ + + YI DKD+F +FY K LA RL+
Sbjct: 481 SERLARYTDGLLKKS-TKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLANRLIAS 539
Query: 435 KSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDL 494
S + D E ++ KLKQ CG +FTSK+ M TD+ L++E +F++++++ P +
Sbjct: 540 TSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKTVQPDVKF 599
Query: 495 TVT---VLTTGFWP 505
T +L G WP
Sbjct: 600 VPTQTMILQAGSWP 613
Score = 233 (87.1 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 61/223 (27%), Positives = 105/223 (47%)
Query: 511 DLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASAL 570
+ +LP + ++ F +FY K RKLTW++++ ++ + + + YQ +AL
Sbjct: 633 NFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAAL 692
Query: 571 LLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSK 630
L F D + +I ++ +S D +++ + ++ +L + T N
Sbjct: 693 LCFERRDAILVKDIGEEIGVSGDYLLKTIRTI--LDVTLLTCDDQNLTADSL--VRLNMS 748
Query: 631 FTDKMRRIKIPLPPXXXXX-----XXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLE 685
T K + ++ P R+Y ++ +IVRIMK+RKVL H LV E
Sbjct: 749 MTSKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTE 808
Query: 686 CVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
++Q F PD IKK IEDLI + Y++R N ++YLA
Sbjct: 809 IMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQNDE-YQYLA 850
Score = 47 (21.6 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 75 EFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLN 116
+ +L+E K W ++ R F YL++ F+ ++ L+
Sbjct: 159 DLLLQEYHKMWRVFHEGAIFIHRLFGYLNKQFVKQKRCTDLD 200
>RGD|621742 [details] [associations]
symbol:Cul5 "cullin 5" species:10116 "Rattus norvegicus"
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005000
"vasopressin receptor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin
ligase complex" evidence=ISO;TAS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA;ISO] [GO:0051480 "cytosolic calcium
ion homeostasis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 RGD:621742
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0004842 GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0005000 GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000007610 KO:K10612
OMA:EVTTFQM CTD:8065 HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ
EMBL:AF135115 IPI:IPI00325517 RefSeq:NP_073174.1 UniGene:Rn.163001
ProteinModelPortal:Q9JJ31 STRING:Q9JJ31 PhosphoSite:Q9JJ31
PRIDE:Q9JJ31 Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 486 (176.1 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 141/530 (26%), Positives = 255/530 (48%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---YYE 176
L + + +++ + +++D+ + L+ ER GE D L+ V + +V + D Y
Sbjct: 140 LDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYR 199
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
++FE A L T +Y +A +++ ++ +YM A+ LK E+ R YL + E +E
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 237 KVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVT 296
+ ++ E + C +++ ++ E L MF L K+P G++P+ ++H+
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLKDLEEHII 319
Query: 297 AEGTA-LVKLAEDAASNKKAEKRDVVGLQEQV--FVRKVIE-------LHDK-YLAYVND 345
+ G A +V AE ++ + ++ L + V++ + DK Y A VND
Sbjct: 320 SAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVND 379
Query: 346 CFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGG-SEKLSDEAIEEMLE 404
T+F L + K S ELLA +CD +L+K S+KL+ E IE L+
Sbjct: 380 A----TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLK 435
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQ-CGGQFTSKMEG 463
+V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+
Sbjct: 436 EVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLAR 495
Query: 464 MVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWP--SYKSFDLNLPAEMVKC 521
M D+ ++ + +F+E NN A P + + +L G W S K F ++LP E+
Sbjct: 496 MFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDL 554
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDR--L 579
+ EFY+ RKL W + + + K E +L VTT+Q + L +N R +
Sbjct: 555 IPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKI 614
Query: 580 SYSEIMTQLNLSDDDVVRLLHSLSC---AKYKILNKEPNTKTISPTDHFE 626
S+ + L D ++ R L SL K ++L +P SP D E
Sbjct: 615 SFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVN--SPKDFTE 662
Score = 130 (50.8 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 666 SIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFR 725
+I++IMK RK + + QL E VE L MF P K IK++IE LI Y+ RD+++ N F
Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFI 777
Query: 726 YLA 728
Y+A
Sbjct: 778 YMA 780
Score = 64 (27.6 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 32/182 (17%), Positives = 75/182 (41%)
Query: 3 MNERKTIDLEQGWEFMQKGITKLKNILEGLPEPQ----FSSEDYMMLYTYLFQPHLVSAF 58
+ + ++ E W+FM+ + KL E + + Q FS + L+ + A
Sbjct: 7 LKNKGSLQFEDKWDFMRPIVLKLLR-QESVTKQQWFDLFSDVHAVCLWDDKGSSKIHQAL 65
Query: 59 VNILLLVLPSIREK---H--DEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLP 113
+L + + + H D +L+ + W L + F L+ + ++S
Sbjct: 66 KEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEVTLLGKQSSN 125
Query: 114 P--------LNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFV 165
+ ++ L + + +++ + +++D+ + L+ ER GE D L+ V + +V
Sbjct: 126 KKSNMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYV 185
Query: 166 EI 167
+
Sbjct: 186 NL 187
>UNIPROTKB|Q9JJ31 [details] [associations]
symbol:Cul5 "Cullin-5" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:621742 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006970
GO:GO:0006511 GO:GO:0051480 GO:GO:0004842 GO:GO:0000209
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0005000 GO:GO:0031466
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AF135115 IPI:IPI00325517
RefSeq:NP_073174.1 UniGene:Rn.163001 ProteinModelPortal:Q9JJ31
STRING:Q9JJ31 PhosphoSite:Q9JJ31 PRIDE:Q9JJ31
Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 486 (176.1 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 141/530 (26%), Positives = 255/530 (48%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---YYE 176
L + + +++ + +++D+ + L+ ER GE D L+ V + +V + D Y
Sbjct: 140 LDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYR 199
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
++FE A L T +Y +A +++ ++ +YM A+ LK E+ R YL + E +E
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 237 KVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVT 296
+ ++ E + C +++ ++ E L MF L K+P G++P+ ++H+
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLKDLEEHII 319
Query: 297 AEGTA-LVKLAEDAASNKKAEKRDVVGLQEQV--FVRKVIE-------LHDK-YLAYVND 345
+ G A +V AE ++ + ++ L + V++ + DK Y A VND
Sbjct: 320 SAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVND 379
Query: 346 CFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGG-SEKLSDEAIEEMLE 404
T+F L + K S ELLA +CD +L+K S+KL+ E IE L+
Sbjct: 380 A----TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLK 435
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQ-CGGQFTSKMEG 463
+V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+
Sbjct: 436 EVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLAR 495
Query: 464 MVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWP--SYKSFDLNLPAEMVKC 521
M D+ ++ + +F+E NN A P + + +L G W S K F ++LP E+
Sbjct: 496 MFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDL 554
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDR--L 579
+ EFY+ RKL W + + + K E +L VTT+Q + L +N R +
Sbjct: 555 IPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKI 614
Query: 580 SYSEIMTQLNLSDDDVVRLLHSLSC---AKYKILNKEPNTKTISPTDHFE 626
S+ + L D ++ R L SL K ++L +P SP D E
Sbjct: 615 SFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVN--SPKDFTE 662
Score = 130 (50.8 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 666 SIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFR 725
+I++IMK RK + + QL E VE L MF P K IK++IE LI Y+ RD+++ N F
Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFI 777
Query: 726 YLA 728
Y+A
Sbjct: 778 YMA 780
Score = 64 (27.6 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 32/182 (17%), Positives = 75/182 (41%)
Query: 3 MNERKTIDLEQGWEFMQKGITKLKNILEGLPEPQ----FSSEDYMMLYTYLFQPHLVSAF 58
+ + ++ E W+FM+ + KL E + + Q FS + L+ + A
Sbjct: 7 LKNKGSLQFEDKWDFMRPIVLKLLR-QESVTKQQWFDLFSDVHAVCLWDDKGSSKIHQAL 65
Query: 59 VNILLLVLPSIREK---H--DEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLP 113
+L + + + H D +L+ + W L + F L+ + ++S
Sbjct: 66 KEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEVTLLGKQSSN 125
Query: 114 P--------LNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFV 165
+ ++ L + + +++ + +++D+ + L+ ER GE D L+ V + +V
Sbjct: 126 KKSNMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYV 185
Query: 166 EI 167
+
Sbjct: 186 NL 187
>ZFIN|ZDB-GENE-040426-1357 [details] [associations]
symbol:cul4a "cullin 4A" species:7955 "Danio
rerio" [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0071600 "otic vesicle morphogenesis"
evidence=IMP] [GO:0035118 "embryonic pectoral fin morphogenesis"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 ZFIN:ZDB-GENE-040426-1357
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0035118 KO:K10609 HOVERGEN:HBG003619 CTD:8451 GO:GO:0071600
EMBL:BC054607 IPI:IPI00487530 RefSeq:NP_957321.1 UniGene:Dr.84245
ProteinModelPortal:Q7T2C1 SMR:Q7T2C1 STRING:Q7T2C1 GeneID:394002
KEGG:dre:394002 NextBio:20814969 Uniprot:Q7T2C1
Length = 635
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 149/442 (33%), Positives = 241/442 (54%)
Query: 183 MLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHEL 242
ML D Y + L ++ Y + + L +E+D V YLH + + LE+ +
Sbjct: 205 MLSDLQVYKDSFEQRF-LSETTRLYAAEGQR-LMQERD-VPEYLHHVA--RRLEEENDRV 259
Query: 243 LSVYANQLLEKEHSGC--HALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEG- 299
+S Y +Q +K LL + L + R R + ++ +++ +G
Sbjct: 260 IS-YLDQSTQKPLIATVEKQLLGEHMTTILQKGLRTLLDENRVCE-LTLLYELFSKVKGG 317
Query: 300 -TALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSL 357
TAL++ + + AE V + ++ V+++++ D+ + CFQ + F ++
Sbjct: 318 LTALLQSWREYIKSVGAET--VCSPERDREMVQELLDFKDQMDSVTQSCFQRNESFINAM 375
Query: 358 KEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKD 417
KEAFE F N+ + AEL+A + D+ L+ G E ++E +E +L+K++ + +I KD
Sbjct: 376 KEAFENFINQ--RPNKPAELIAKYVDSKLRAGNKEA-TEEELERILDKIMIIFRFIHGKD 432
Query: 418 LFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 477
+F FY+K LA+RLL KSA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++
Sbjct: 433 VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQ 492
Query: 478 FEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRK 537
F++Y+ N + I+LTV +LT G+WPSY D++LPAEMVK EVF+ FY K RK
Sbjct: 493 FKQYMQNQTEPS-NIELTVNILTMGYWPSYTPMDVHLPAEMVKLQEVFKLFYLGKHSGRK 551
Query: 538 LTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVR 597
L W +LG L +F+ EL V+ +Q LL+FN SD S EI + + ++ R
Sbjct: 552 LQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMFNESDECSVEEIRVATGIEEGELKR 611
Query: 598 LLHSLSCAKYKILNKEPNTKTI 619
L SL+C K ++LNK P K +
Sbjct: 612 TLQSLACGKARVLNKTPRGKEV 633
Score = 265 (98.3 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 64/275 (23%), Positives = 137/275 (49%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSL-PPLNEVGLTCFRDLVYTE--LNGK 134
L+ + + W +H + F +LDR ++ + SL P + + GL FR + ++ + +
Sbjct: 117 LKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHIVSDAAVQSR 176
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
++ +++ER GE +DR+LL+++L + + + Y++ FE L +T Y+ +
Sbjct: 177 TVQGILEQVERERSGETVDRSLLRSLLGM-----LSDLQVYKDSFEQRFLSETTRLYAAE 231
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE 254
+ E P+Y+ L+ E DRV YL S++ L+ V+ +LL + +L+K
Sbjct: 232 GQRLMQERDVPEYLHHVARRLEEENDRVISYLDQSTQKPLIATVEKQLLGEHMTTILQK- 290
Query: 255 HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKK 314
G LL +++V +L+ ++ LFSK+ GL + +++++ + G V + +
Sbjct: 291 --GLRTLLDENRVCELTLLYELFSKVKGGLTALLQSWREYIKSVGAETV-CSPERDREMV 347
Query: 315 AEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQN 349
E D + V + + ++ ++ + + F+N
Sbjct: 348 QELLDFKDQMDSV-TQSCFQRNESFINAMKEAFEN 381
>MGI|MGI:1922967 [details] [associations]
symbol:Cul5 "cullin 5" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0051480 "cytosolic
calcium ion homeostasis" evidence=ISO] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1922967
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000007610 KO:K10612 CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AK014894 EMBL:AK030306
EMBL:AK031955 EMBL:AK046030 EMBL:AK080305 EMBL:BC075710
IPI:IPI00988369 RefSeq:NP_001155090.1 RefSeq:NP_082083.2
UniGene:Mm.218910 UniGene:Mm.482399 PDB:2WZK PDBsum:2WZK
ProteinModelPortal:Q9D5V5 SMR:Q9D5V5 IntAct:Q9D5V5 STRING:Q9D5V5
PhosphoSite:Q9D5V5 PaxDb:Q9D5V5 PRIDE:Q9D5V5 GeneID:75717
KEGG:mmu:75717 InParanoid:Q9D5V5 EvolutionaryTrace:Q9D5V5
NextBio:343766 Bgee:Q9D5V5 CleanEx:MM_CUL5 Genevestigator:Q9D5V5
GermOnline:ENSMUSG00000032030 Uniprot:Q9D5V5
Length = 780
Score = 488 (176.8 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 141/530 (26%), Positives = 255/530 (48%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---YYE 176
L + + +++ + +++D+ + L+ ER GE D L+ V + +V + D Y
Sbjct: 140 LDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYR 199
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
++FE A L T +Y +A +++ ++ +YM A+ LK E+ R YL + E +E
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 237 KVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVT 296
+ ++ E + C +++ ++ E L MF L K+P G++P+ ++H+
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHII 319
Query: 297 AEGTA-LVKLAEDAASNKKAEKRDVVGLQEQV--FVRKVIE-------LHDK-YLAYVND 345
+ G A +V AE ++ + ++ L + V++ + DK Y A VND
Sbjct: 320 SAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVND 379
Query: 346 CFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGG-SEKLSDEAIEEMLE 404
T+F L + K S ELLA +CD +L+K S+KL+ E IE L+
Sbjct: 380 A----TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLK 435
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQ-CGGQFTSKMEG 463
+V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+
Sbjct: 436 EVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLAR 495
Query: 464 MVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWP--SYKSFDLNLPAEMVKC 521
M D+ ++ + +F+E NN A P + + +L G W S K F ++LP E+
Sbjct: 496 MFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDL 554
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDR--L 579
+ EFY+ RKL W + + + K E +L VTT+Q + L +N R +
Sbjct: 555 IPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKI 614
Query: 580 SYSEIMTQLNLSDDDVVRLLHSLSC---AKYKILNKEPNTKTISPTDHFE 626
S+ + L D ++ R L SL K ++L +P SP D E
Sbjct: 615 SFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVN--SPKDFTE 662
Score = 126 (49.4 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 666 SIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFR 725
+I++IMK RK + + QL E VE L MF P K IK+++E LI Y+ RD+++ N F
Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINTFI 777
Query: 726 YLA 728
Y+A
Sbjct: 778 YMA 780
Score = 63 (27.2 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 32/182 (17%), Positives = 74/182 (40%)
Query: 3 MNERKTIDLEQGWEFMQKGITKLKNILEGLPEPQ----FSSEDYMMLYTYLFQPHLVSAF 58
+ + ++ E W+FM + KL E + + Q FS + L+ + A
Sbjct: 7 LKNKGSLQFEDKWDFMHPIVLKLLR-QESVTKQQWFDLFSDVHAVCLWDDKGSSKIHQAL 65
Query: 59 VNILLLVLPSIREK---H--DEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLP 113
+L + + + H D +L+ + W L + F L+ + ++S
Sbjct: 66 KEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEVTLLGKQSSN 125
Query: 114 P--------LNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFV 165
+ ++ L + + +++ + +++D+ + L+ ER GE D L+ V + +V
Sbjct: 126 KKSNMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYV 185
Query: 166 EI 167
+
Sbjct: 186 NL 187
>UNIPROTKB|G4N0J9 [details] [associations]
symbol:MGG_07731 "Cullin-3" species:242507 "Magnaporthe
oryzae 70-15" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CM001233
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
RefSeq:XP_003712937.1 ProteinModelPortal:G4N0J9
EnsemblFungi:MGG_07731T0 GeneID:2683658 KEGG:mgr:MGG_07731
Uniprot:G4N0J9
Length = 830
Score = 362 (132.5 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 97/347 (27%), Positives = 176/347 (50%)
Query: 179 FETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKV 238
FE +L+ + +Y +A + ++ + L E+DR L + S K+ V
Sbjct: 231 FEPHLLEASRTFYRSEALKLLRNGDASIWIRQTHRRLLEEEDRCKTTLSTLSIEKMTRAV 290
Query: 239 QHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAE 298
+ EL+S + N L E++G +L DD+VEDL+ +++L +++ D + + A
Sbjct: 291 EAELISAHLNDFLALENNGLRQMLDDDRVEDLAILYQLVARVDPSKDLLKKGVLNRILAL 350
Query: 299 GTALVK--------LAE-DAASNKKAEKRDVVGLQEQV--------FVRKVIELHDKYLA 341
G + K +A+ DAA N AEK L +Q +V V++L K+
Sbjct: 351 GAEIEKNLSTIDFSVAQGDAAENPAAEKPKSQALSQQAQQTAAAIKWVHDVLDLRAKFDV 410
Query: 342 YVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEE 401
F ++ + F F ++ G SS E ++ + D LK+G K SD +
Sbjct: 411 IWEKSFAQDPGLQTTMTKGFSDFIHQ--FGRSS-EFVSLYIDENLKRGIRGK-SDLEVTA 466
Query: 402 MLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKM 461
+L++ + ++ Y+ DKDLF +Y+K L RRLL ++++++ E+ ++T ++ + G FTSK
Sbjct: 467 ILDRSIVMIRYLKDKDLFERYYQKHLGRRLLHSRASSEEAEKQLITMMQLELGKHFTSKF 526
Query: 462 EGMVTDLTLARENQTSFEEYLSNNPNAN---PGIDLTVTVLTTGFWP 505
EGM D+T++ E T + E++ + + + IDL ++VLT+ WP
Sbjct: 527 EGMFKDITISEELSTKYGEHIRSLGDVDVHHKPIDLAISVLTSNSWP 573
Score = 294 (108.6 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 78/185 (42%), Positives = 102/185 (55%)
Query: 556 RTTELIVTTYQASALLLFNS---SDRLSYSEIMTQLNLSDDDVVRLLHSLSC-AKYKILN 611
R EL V+TY L+LFNS + LS+ +I + ++ D+ R L SLS K ++L
Sbjct: 649 RRYELNVSTYGMVVLMLFNSLEDGETLSFEDIQAETSIPPKDLSRALASLSINPKARVLL 708
Query: 612 KEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX-------XXXXXXXXRRYAID 664
K+P TKTI P D F FN+ F K +IK P+ RR+ ID
Sbjct: 709 KDPATKTIRPGDKFSFNAGFVSKAIKIKAPVINSQSKVEGDEERQRTEDKNDETRRHMID 768
Query: 665 ASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLER-DKSNPNM 723
A+IVRIMKSRK L H L+ E + QL F+PD IK RIEDLI R+YLER D S
Sbjct: 769 AAIVRIMKSRKELAHNALLAEVIGQLVSRFQPDVAMIKTRIEDLIAREYLERLDDSG--- 825
Query: 724 FRYLA 728
++Y+A
Sbjct: 826 YKYMA 830
Score = 221 (82.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 100/406 (24%), Positives = 168/406 (41%)
Query: 270 LSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFV 329
L+R+ L ++I + L + Q AE A K A S + + + +V
Sbjct: 344 LNRILALGAEIEKNLSTIDFSVAQGDAAENPAAEKPKSQALSQQAQQTAAAIK-----WV 398
Query: 330 RKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
V++L K+ F ++ + F F ++ G SS E ++ + D LK+G
Sbjct: 399 HDVLDLRAKFDVIWEKSFAQDPGLQTTMTKGFSDFIHQ--FGRSS-EFVSLYIDENLKRG 455
Query: 390 --GSEKLSDEAIEEMLEKVVKLLAYISD--KDLFAEFYRKKLARRLLFDKSANDDHERSI 445
G L AI + +++ L D + + + ++L + A +
Sbjct: 456 IRGKSDLEVTAILDRSIVMIRYLKD-KDLFERYYQKHLGRRLLHSRASSEEAEKQLITMM 514
Query: 446 LTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWP 505
+L + +F + + L+ + + + P IDL ++VLT+ WP
Sbjct: 515 QLELGKHFTSKFEGMFKDITISEELSTKYGEHIRSLGDVDVHHKP-IDLAISVLTSNSWP 573
Query: 506 --------------SYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLG 551
+ D N P E+ + + F +FY R LTWI S G+ ++
Sbjct: 574 PDVMGRPAQVGRGDGPPAVDCNYPPEIKRLQDSFFKFYLKDRSGRVLTWIGSAGSADIKC 633
Query: 552 KF-----------ESRTTELIVTTYQASALLLFNS---SDRLSYSEIMTQLNLSDDDVVR 597
F R EL V+TY L+LFNS + LS+ +I + ++ D+ R
Sbjct: 634 VFPPVKGMSGPLSRERRYELNVSTYGMVVLMLFNSLEDGETLSFEDIQAETSIPPKDLSR 693
Query: 598 LLHSLSC-AKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL 642
L SLS K ++L K+P TKTI P D F FN+ F K +IK P+
Sbjct: 694 ALASLSINPKARVLLKDPATKTIRPGDKFSFNAGFVSKAIKIKAPV 739
Score = 203 (76.5 bits), Expect = 5.1e-38, Sum P(3) = 5.1e-38
Identities = 109/437 (24%), Positives = 186/437 (42%)
Query: 70 REKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI--ARRSLPPLNEVGLTCFRD-L 126
RE D FM + L + W NH++ + ++ YLD+ F+ +R + + +GL FRD L
Sbjct: 107 REMGDTFM-KGLKEAWENHRMSMNMVADILMYLDKGFLKESRGTSIFVTTIGL--FRDHL 163
Query: 127 VYTE-LNGKVR-----DAVITLI----DQEREGEQIDRALLKNVLDIFVEIGMG--QMD- 173
V + G R D + T+I D EREG+ I+R+L+ + + + ++ +MD
Sbjct: 164 VNPNTVVGHDRTFSLFDILSTVILDHIDMEREGDVINRSLIHSCVKMLEDLYETDEEMDA 223
Query: 174 --YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSE 231
Y FE +L+ + +Y +A + ++ + L E+DR L + S
Sbjct: 224 DRLYLVRFEPHLLEASRTFYRSEALKLLRNGDASIWIRQTHRRLLEEEDRCKTTLSTLSI 283
Query: 232 PKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIF 291
K+ V+ EL+S + N L E++G +L DD+VEDL+ +++L +++ DP ++
Sbjct: 284 EKMTRAVEAELISAHLNDFLALENNGLRQMLDDDRVEDLAILYQLVARV----DPSKDLL 339
Query: 292 KQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHT 351
K+ V AL A K D Q E K A Q
Sbjct: 340 KKGVLNRILAL-----GAEIEKNLSTIDFSVAQGDAAENPAAE-KPKSQALSQQAQQTAA 393
Query: 352 LF---HK--SLKEAFEVFCNKGVAGSSSAELLAT--FCDNILKKGGSEKLSDEAIEEMLE 404
H L+ F+V K A + T F D I + G S + I+E L+
Sbjct: 394 AIKWVHDVLDLRAKFDVIWEKSFAQDPGLQTTMTKGFSDFIHQFGRSSEFVSLYIDENLK 453
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTK--LKQQCGGQFTSKME 462
+ ++ SD ++ A R + R L DK + + + L + L + + K
Sbjct: 454 RGIRGK---SDLEVTAILDRSIVMIRYLKDKDLFERYYQKHLGRRLLHSRASSEEAEKQL 510
Query: 463 GMVTDLTLARENQTSFE 479
+ L L + + FE
Sbjct: 511 ITMMQLELGKHFTSKFE 527
Score = 50 (22.7 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 9 IDLEQGWEFMQKG-ITKLKNILEGLPEPQFSSEDYMMLYTYLFQPHLVSA 57
ID+E+ + + + I +LE L E D LY F+PHL+ A
Sbjct: 190 IDMEREGDVINRSLIHSCVKMLEDLYETD-EEMDADRLYLVRFEPHLLEA 238
Score = 39 (18.8 bits), Expect = 2.4e-55, Sum P(3) = 2.4e-55
Identities = 5/21 (23%), Positives = 14/21 (66%)
Query: 7 KTIDLEQGWEFMQKGITKLKN 27
+T + +Q W+ +++ +T + N
Sbjct: 17 ETDEFDQQWDVLREALTDIHN 37
>WB|WBGene00000839 [details] [associations]
symbol:cul-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0002009 GO:GO:0040010 GO:GO:0006260
GO:GO:0040011 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0040035 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 EMBL:FO080734 EMBL:U58086
PIR:T16367 RefSeq:NP_495525.2 ProteinModelPortal:Q17392 SMR:Q17392
IntAct:Q17392 STRING:Q17392 PaxDb:Q17392 EnsemblMetazoa:F45E12.3
GeneID:174198 KEGG:cel:CELE_F45E12.3 UCSC:F45E12.3 CTD:35780
WormBase:F45E12.3 InParanoid:Q17392 OMA:ERIFCSS NextBio:882965
Uniprot:Q17392
Length = 840
Score = 561 (202.5 bits), Expect = 1.0e-55, Sum P(2) = 1.0e-55
Identities = 157/532 (29%), Positives = 256/532 (48%)
Query: 219 KDRVSHYLH----SSSEPKLLEKVQHELLSVYANQLL-EKEHSGCHALLRDDKVEDLSRM 273
+D+++ Y + EP L+ VQ + + Q + E L+ D + D+ RM
Sbjct: 331 EDQINRYSQLVKVNFDEPSALKDVQATVTNCLIQQAIPEILTHDFDDLIDSDNISDIGRM 390
Query: 274 FRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVI 333
F L + G D V F +++ G L+ D D+V + F +KV
Sbjct: 391 FNLCRQCVGGEDEVRTQFSKYLKKRGEKLIATCPD---------EDLVS-ELLAFKKKVD 440
Query: 334 ELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEK 393
+ ND + + L +AFE F NK V SAEL++ +L
Sbjct: 441 FIMTGSFKSANDPVK----MRQCLSDAFESFVNKQV--DRSAELISKHFHTLLHSSNKNV 494
Query: 394 LSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQC 453
D +++M+++ + L Y+ KD+F +Y++ LA+RL ++SA+ D E+ +L KLK +C
Sbjct: 495 SDDTTLDQMVDEAIVLFRYLRGKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTEC 554
Query: 454 GGQFTSKMEGMVTDLTLARENQTSFEEYLS--NNPNANPGIDLTVTVLTTGFWPSYKSFD 511
G FT K+EGM D+ + F +YL N AN T V+T +WP+Y +++
Sbjct: 555 GSAFTYKLEGMFKDMDASENYGRLFNQYLEHMNKEKAN----FTARVITPEYWPTYDTYE 610
Query: 512 LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTT-ELIVTTYQASAL 570
+N+P EM + +++FY+ + +R + W + L + + F ELI T YQ L
Sbjct: 611 INIPKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVIL 670
Query: 571 LLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCA--KYKILNK------EPNTKTIS-- 620
LLFN + + +EI+ + + +VV+ + +L K K+L + E T+
Sbjct: 671 LLFNKCETWTVAEIVEHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENL 730
Query: 621 PTDHFEFNSKFTDKMRRIKIPLPPXXXXXXXXXXXX----XXRRYAIDASIVRIMKSRKV 676
+ F NSKFT+K R++I R+Y IDA++VRIMK+RK
Sbjct: 731 KNEKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQ 790
Query: 677 LGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
L HQ L+ E ++QL F IKKR+E LI R+Y+ RD + + Y+A
Sbjct: 791 LNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840
Score = 38 (18.4 bits), Expect = 1.0e-55, Sum P(2) = 1.0e-55
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 20 KGITKLKNILEGLPEPQFSSEDYMMLYTYLFQ--PHLVSAFVNILL 63
K + + N +E +P + + E Y+ + ++Q P ++ NI L
Sbjct: 174 KSLKESLNAVEQVPLAEDNCEQYLEKFGQIWQAYPVKINLIRNIFL 219
>UNIPROTKB|F1N7B5 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:DAAA02040193
EMBL:DAAA02040192 IPI:IPI00924344 Ensembl:ENSBTAT00000061240
ArrayExpress:F1N7B5 Uniprot:F1N7B5
Length = 759
Score = 491 (177.9 bits), Expect = 7.1e-55, Sum P(2) = 7.1e-55
Identities = 142/530 (26%), Positives = 255/530 (48%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---YYE 176
L + + +++ + +++D+ + L+ ER GE D L+ V + +V + D Y
Sbjct: 119 LDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYR 178
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
++FE A L T +Y +A +++ ++ +YM A+ LK E+ R YL + E +E
Sbjct: 179 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 238
Query: 237 KVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVT 296
+ ++ E + C +++ ++ E L MF L K+P G++P+ ++H+
Sbjct: 239 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHII 298
Query: 297 AEGTA-LVKLAEDAASNKKAEKRDVVGLQEQV--FVRKVIE-------LHDK-YLAYVND 345
+ G A +V AE ++ + ++ L + V++ + DK Y A VND
Sbjct: 299 SAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVND 358
Query: 346 CFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGG-SEKLSDEAIEEMLE 404
T+F L + K S ELLA +CD +L+K S+KL+ E IE L+
Sbjct: 359 A----TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLK 414
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQ-CGGQFTSKMEG 463
+V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+
Sbjct: 415 EVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLAR 474
Query: 464 MVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWP--SYKSFDLNLPAEMVKC 521
M D+ ++ + +F+E NN A P + + +L G W S K F ++LP E+
Sbjct: 475 MFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDL 533
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDR--L 579
+ EFY+ RKL W + + + K E +L VTT+Q + L +N R +
Sbjct: 534 IPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKI 593
Query: 580 SYSEIMTQLNLSDDDVVRLLHSLSC---AKYKILNKEPNTKTISPTDHFE 626
S+ + L D ++ R L SL K ++L EP SP D E
Sbjct: 594 SFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVN--SPKDFTE 641
Score = 133 (51.9 bits), Expect = 7.1e-55, Sum P(2) = 7.1e-55
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 666 SIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFR 725
+I++IMK RK + + QL E VE L MF P K IK++IE LI Y+ RD+S+ N F
Sbjct: 697 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFI 756
Query: 726 YLA 728
Y+A
Sbjct: 757 YMA 759
>UNIPROTKB|J9PAX0 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:AAEX03003515
Ensembl:ENSCAFT00000043293 Uniprot:J9PAX0
Length = 759
Score = 491 (177.9 bits), Expect = 7.1e-55, Sum P(2) = 7.1e-55
Identities = 142/530 (26%), Positives = 255/530 (48%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---YYE 176
L + + +++ + +++D+ + L+ ER GE D L+ V + +V + D Y
Sbjct: 119 LDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYR 178
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
++FE A L T +Y +A +++ ++ +YM A+ LK E+ R YL + E +E
Sbjct: 179 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 238
Query: 237 KVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVT 296
+ ++ E + C +++ ++ E L MF L K+P G++P+ ++H+
Sbjct: 239 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHII 298
Query: 297 AEGTA-LVKLAEDAASNKKAEKRDVVGLQEQV--FVRKVIE-------LHDK-YLAYVND 345
+ G A +V AE ++ + ++ L + V++ + DK Y A VND
Sbjct: 299 SAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVND 358
Query: 346 CFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGG-SEKLSDEAIEEMLE 404
T+F L + K S ELLA +CD +L+K S+KL+ E IE L+
Sbjct: 359 A----TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLK 414
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQ-CGGQFTSKMEG 463
+V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+
Sbjct: 415 EVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLAR 474
Query: 464 MVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWP--SYKSFDLNLPAEMVKC 521
M D+ ++ + +F+E NN A P + + +L G W S K F ++LP E+
Sbjct: 475 MFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDL 533
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDR--L 579
+ EFY+ RKL W + + + K E +L VTT+Q + L +N R +
Sbjct: 534 IPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKI 593
Query: 580 SYSEIMTQLNLSDDDVVRLLHSLSC---AKYKILNKEPNTKTISPTDHFE 626
S+ + L D ++ R L SL K ++L EP SP D E
Sbjct: 594 SFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVN--SPKDFTE 641
Score = 133 (51.9 bits), Expect = 7.1e-55, Sum P(2) = 7.1e-55
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 666 SIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFR 725
+I++IMK RK + + QL E VE L MF P K IK++IE LI Y+ RD+S+ N F
Sbjct: 697 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFI 756
Query: 726 YLA 728
Y+A
Sbjct: 757 YMA 759
>UNIPROTKB|Q93034 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006970 "response to osmotic stress"
evidence=IEA] [GO:0051480 "cytosolic calcium ion homeostasis"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IDA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0004872
"receptor activity" evidence=TAS] [GO:0005262 "calcium channel
activity" evidence=TAS] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0070588 "calcium ion
transmembrane transport" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0016032
EMBL:CH471065 GO:GO:0000082 GO:GO:0008283 GO:GO:0005262
GO:GO:0004872 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0097193 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466
GO:GO:0031625 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM EMBL:X81882
EMBL:AF017061 EMBL:AF327710 EMBL:AK292575 EMBL:BC063306
IPI:IPI00216003 RefSeq:NP_003469.2 UniGene:Hs.440320
UniGene:Hs.701122 PDB:3DPL PDB:3DQV PDBsum:3DPL PDBsum:3DQV
ProteinModelPortal:Q93034 SMR:Q93034 DIP:DIP-43696N IntAct:Q93034
MINT:MINT-1184052 STRING:Q93034 PhosphoSite:Q93034 DMDM:14917099
PaxDb:Q93034 PRIDE:Q93034 Ensembl:ENST00000393094
Ensembl:ENST00000531427 GeneID:8065 KEGG:hsa:8065 UCSC:uc001pjv.3
CTD:8065 GeneCards:GC11P107913 HGNC:HGNC:2556 HPA:CAB017787
HPA:HPA002185 MIM:601741 neXtProt:NX_Q93034 PharmGKB:PA27052
HOVERGEN:HBG099672 InParanoid:Q93034 OrthoDB:EOG46Q6RZ
PhylomeDB:Q93034 EvolutionaryTrace:Q93034 GenomeRNAi:8065
NextBio:30655 ArrayExpress:Q93034 Bgee:Q93034 CleanEx:HS_CUL5
Genevestigator:Q93034 GermOnline:ENSG00000166266 Uniprot:Q93034
Length = 780
Score = 491 (177.9 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 142/530 (26%), Positives = 255/530 (48%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---YYE 176
L + + +++ + +++D+ + L+ ER GE D L+ V + +V + D Y
Sbjct: 140 LDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYR 199
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
++FE A L T +Y +A +++ ++ +YM A+ LK E+ R YL + E +E
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 237 KVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVT 296
+ ++ E + C +++ ++ E L MF L K+P G++P+ ++H+
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHII 319
Query: 297 AEGTA-LVKLAEDAASNKKAEKRDVVGLQEQV--FVRKVIE-------LHDK-YLAYVND 345
+ G A +V AE ++ + ++ L + V++ + DK Y A VND
Sbjct: 320 SAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVND 379
Query: 346 CFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGG-SEKLSDEAIEEMLE 404
T+F L + K S ELLA +CD +L+K S+KL+ E IE L+
Sbjct: 380 A----TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLK 435
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQ-CGGQFTSKMEG 463
+V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+
Sbjct: 436 EVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLAR 495
Query: 464 MVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWP--SYKSFDLNLPAEMVKC 521
M D+ ++ + +F+E NN A P + + +L G W S K F ++LP E+
Sbjct: 496 MFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDL 554
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDR--L 579
+ EFY+ RKL W + + + K E +L VTT+Q + L +N R +
Sbjct: 555 IPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKI 614
Query: 580 SYSEIMTQLNLSDDDVVRLLHSLSC---AKYKILNKEPNTKTISPTDHFE 626
S+ + L D ++ R L SL K ++L EP SP D E
Sbjct: 615 SFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVN--SPKDFTE 662
Score = 133 (51.9 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 666 SIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFR 725
+I++IMK RK + + QL E VE L MF P K IK++IE LI Y+ RD+S+ N F
Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFI 777
Query: 726 YLA 728
Y+A
Sbjct: 778 YMA 780
>UNIPROTKB|I3LFR2 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10612 OMA:EVTTFQM CTD:8065
EMBL:FP340346 RefSeq:XP_003357323.1 ProteinModelPortal:I3LFR2
SMR:I3LFR2 PRIDE:I3LFR2 Ensembl:ENSSSCT00000029949 GeneID:100525708
KEGG:ssc:100525708 Uniprot:I3LFR2
Length = 780
Score = 491 (177.9 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 142/530 (26%), Positives = 255/530 (48%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---YYE 176
L + + +++ + +++D+ + L+ ER GE D L+ V + +V + D Y
Sbjct: 140 LDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYR 199
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
++FE A L T +Y +A +++ ++ +YM A+ LK E+ R YL + E +E
Sbjct: 200 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 259
Query: 237 KVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVT 296
+ ++ E + C +++ ++ E L MF L K+P G++P+ ++H+
Sbjct: 260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHII 319
Query: 297 AEGTA-LVKLAEDAASNKKAEKRDVVGLQEQV--FVRKVIE-------LHDK-YLAYVND 345
+ G A +V AE ++ + ++ L + V++ + DK Y A VND
Sbjct: 320 SAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVND 379
Query: 346 CFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGG-SEKLSDEAIEEMLE 404
T+F L + K S ELLA +CD +L+K S+KL+ E IE L+
Sbjct: 380 A----TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLK 435
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQ-CGGQFTSKMEG 463
+V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+
Sbjct: 436 EVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLAR 495
Query: 464 MVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWP--SYKSFDLNLPAEMVKC 521
M D+ ++ + +F+E NN A P + + +L G W S K F ++LP E+
Sbjct: 496 MFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDL 554
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDR--L 579
+ EFY+ RKL W + + + K E +L VTT+Q + L +N R +
Sbjct: 555 IPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKI 614
Query: 580 SYSEIMTQLNLSDDDVVRLLHSLSC---AKYKILNKEPNTKTISPTDHFE 626
S+ + L D ++ R L SL K ++L EP SP D E
Sbjct: 615 SFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVN--SPKDFTE 662
Score = 133 (51.9 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 666 SIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFR 725
+I++IMK RK + + QL E VE L MF P K IK++IE LI Y+ RD+S+ N F
Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFI 777
Query: 726 YLA 728
Y+A
Sbjct: 778 YMA 780
>UNIPROTKB|F1P0F9 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:AADN02005055 IPI:IPI00593656
Ensembl:ENSGALT00000027725 Uniprot:F1P0F9
Length = 776
Score = 492 (178.3 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 142/530 (26%), Positives = 255/530 (48%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---YYE 176
L + + +++ + +++D+ + L+ ER GE D L+ V + +V + D Y
Sbjct: 136 LDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYR 195
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
++FE A L T +Y +A +++ ++ +YM A+ LK E+ R YL + E +E
Sbjct: 196 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 255
Query: 237 KVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVT 296
+ ++ E + C +++ ++ E L MF L K+P G++P+ ++H+
Sbjct: 256 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIV 315
Query: 297 AEGTA-LVKLAEDAASNKKAEKRDVVGLQEQV--FVRKVIE-------LHDK-YLAYVND 345
+ G A +V AE ++ + ++ L + V++ + DK Y A VND
Sbjct: 316 SAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVND 375
Query: 346 CFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGG-SEKLSDEAIEEMLE 404
T+F L + K S ELLA +CD +L+K S+KL+ E IE L+
Sbjct: 376 A----TIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLK 431
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQ-CGGQFTSKMEG 463
+V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+
Sbjct: 432 EVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLAR 491
Query: 464 MVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWP--SYKSFDLNLPAEMVKC 521
M D+ ++ + +F+E NN A P + + +L G W S K F ++LP E+
Sbjct: 492 MFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDL 550
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDR--L 579
+ EFY+ RKL W + + + K E +L VTT+Q + L +N R +
Sbjct: 551 IPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKI 610
Query: 580 SYSEIMTQLNLSDDDVVRLLHSLSC---AKYKILNKEPNTKTISPTDHFE 626
S+ + L D ++ R L SL K ++L EP SP D E
Sbjct: 611 SFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVN--SPKDFTE 658
Score = 131 (51.2 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 666 SIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFR 725
+I++IMK RK + + QL E VE L MF P K IK++IE LI Y+ RD+S+ N F
Sbjct: 714 AIIQIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFI 773
Query: 726 YLA 728
Y+A
Sbjct: 774 YMA 776
>DICTYBASE|DDB_G0292794 [details] [associations]
symbol:culD "cullin D" species:44689 "Dictyostelium
discoideum" [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0292794 GO:GO:0005634 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AAFI02000196
InterPro:IPR016159 SUPFAM:SSF74788 KO:K10609 HSSP:Q9JLV5
OMA:FEDSLDF RefSeq:XP_629469.1 ProteinModelPortal:Q54CS2 SMR:Q54CS2
STRING:Q54CS2 EnsemblProtists:DDB0266743 GeneID:8628859
KEGG:ddi:DDB_G0292794 ProtClustDB:CLSZ2429365 Uniprot:Q54CS2
Length = 802
Score = 418 (152.2 bits), Expect = 4.7e-54, Sum P(2) = 4.7e-54
Identities = 101/300 (33%), Positives = 166/300 (55%)
Query: 324 QEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCD 383
+E ++ +++ D+ ++ F + L +LKE+FE F N + AEL+A F D
Sbjct: 366 KEATLIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFIN--TKQNKPAELVARFID 423
Query: 384 NILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHER 443
+ LK GG +++S+E +E +L K + L YI KD+F FY++ L++RLL DKS + D E+
Sbjct: 424 SKLKVGG-KRMSEEELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEK 482
Query: 444 SILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEY-LSNNPNANPGIDLTVTVLTTG 502
S+++KLK +CG FT+K+E M D+ L+ + SF + ++ N + I++ + VLT+G
Sbjct: 483 SMISKLKTECGTTFTAKLEEMFKDIELSNDIMNSFRDSPMTQNFKS---IEMNIYVLTSG 539
Query: 503 FWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIV 562
WP + LP E ++ EVF +FY +K + L W +L C L F EL V
Sbjct: 540 NWPIQPPIEATLPKEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSV 599
Query: 563 TTYQASALLLFNS---SDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKIL-NKEPNTKT 618
+ +Q L LFN LS+ +I L+ ++ + L SL +K IL K+ +T +
Sbjct: 600 SLFQTIILYLFNDVIDGGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSS 659
Score = 215 (80.7 bits), Expect = 4.7e-54, Sum P(2) = 4.7e-54
Identities = 71/315 (22%), Positives = 151/315 (47%)
Query: 12 EQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLFQPHLVSAFVNILLLVLP---S 68
+ W + IT + N+ + Q E Y M+ F L S N + + + +
Sbjct: 68 DSSWNKLSSAITSI-NMKQATTLTQ--EELYKMVENLCFDKILASNLYNKISVQIEKHIT 124
Query: 69 IREKH-------DEFM-LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS--LPPLNEV 118
+ KH D + L+ + W +H + + F YLDR ++ + S + + ++
Sbjct: 125 LTIKHLVLTMSSDPIIFLKSINSIWKDHTNQMIMIRSIFLYLDRTYVIQNSNTVKSIWDL 184
Query: 119 GLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYE 176
GL F + + + L K D+++ I EREG++IDR L+ +++ + + ++ Y
Sbjct: 185 GLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKM-----LSSLNIYT 239
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
FE +K+T +Y + ++ I E P Y+ E L +E +R+ YL S++ +L+
Sbjct: 240 K-FEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQLMA 298
Query: 237 KVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVT 296
+ +L+ + + +LEK G +A++ D++EDL ++++L + + + + ++ ++
Sbjct: 299 VLDRQLIERHVDVILEK---GFNAMVNGDRLEDLGKLYQLLNSVGE-IKKIKESWQSYIK 354
Query: 297 AEGTALVKLAEDAAS 311
G ++ E A+
Sbjct: 355 QTGIQMLNDKEKEAT 369
Score = 196 (74.1 bits), Expect = 3.6e-29, Sum P(2) = 3.6e-29
Identities = 62/177 (35%), Positives = 84/177 (47%)
Query: 558 TELIVTTYQASALLLFNS-SDRLSYSEIMTQLNLSDDDVVRLLHSLS-CAKYKILNKEPN 615
T L + + + L L +S SD L + T N S + S S A
Sbjct: 628 TGLAIPELKKNLLSLCSSKSDILIQKKSSTSSNTSSNTSSNTSSSASGSASGGASGGATK 687
Query: 616 TKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXXXXXXRRYAIDASIVRIM 671
TK I TD F FNSKF+ K+ +IK+ R+Y +DA+IVRIM
Sbjct: 688 TKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDRQYQVDAAIVRIM 747
Query: 672 KSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
K+RK L H L+ E V L F+P +KKRIE LI ++YL RD N ++ Y+A
Sbjct: 748 KTRKTLAHNLLISELVSLL--KFQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
Score = 48 (22.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 26/109 (23%), Positives = 47/109 (43%)
Query: 331 KVIELHDK-YLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKG 389
K+ E+ YL YV + + L E K + +L+ D IL+KG
Sbjct: 260 KINEIETPMYLKYVCERLNQEG---ERLMRYLEQSTKKQLMAVLDRQLIERHVDVILEKG 316
Query: 390 GSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEF---YRKKLARRLLFDK 435
+ ++ + +E+ L K+ +LL + + E Y K+ ++L DK
Sbjct: 317 FNAMVNGDRLED-LGKLYQLLNSVGEIKKIKESWQSYIKQTGIQMLNDK 364
Score = 43 (20.2 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 372 SSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRL 431
S + L D++L E+ DE +++ +VK+L+ ++ F + K+ R
Sbjct: 194 SQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSSLNIYTKFEIEFIKETNR-- 251
Query: 432 LFDKSANDD-HERSILTKLKQQC 453
+D N +E LK C
Sbjct: 252 FYDMEGNSKINEIETPMYLKYVC 274
>UNIPROTKB|K7GPT4 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF75632
GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000035259 Uniprot:K7GPT4
Length = 278
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 118/280 (42%), Positives = 155/280 (55%)
Query: 453 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDL 512
CG FTSK+EGM D+ L+++ F++Y+ N N I+LTV +LT G+WP+Y ++
Sbjct: 2 CGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQ-NVPGNIELTVNILTMGYWPTYVPMEV 60
Query: 513 NLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLL 572
+LP EMVK E+F+ FY K RKL W +LG C L +F+ EL V+ +Q LL+
Sbjct: 61 HLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLM 120
Query: 573 FNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFT 632
FN + S EI + D ++ R L SL+C K ++L K P K I D F N F
Sbjct: 121 FNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFK 180
Query: 633 DKMRRIKIPL----PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVE 688
K+ RIKI R+Y IDA+IVRIMK RK L H LV E
Sbjct: 181 HKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYN 240
Query: 689 QLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
QL KP +KKRIE LI RDY+ERDK NPN + Y+A
Sbjct: 241 QLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQYNYIA 278
>WB|WBGene00000840 [details] [associations]
symbol:cul-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051729
"germline cell cycle switching, mitotic to meiotic cell cycle"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0006468 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051729 GO:GO:0006974 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:Z70783 PIR:T28043 RefSeq:NP_505616.2 ProteinModelPortal:Q23639
SMR:Q23639 DIP:DIP-25847N IntAct:Q23639 MINT:MINT-1126406
STRING:Q23639 PaxDb:Q23639 EnsemblMetazoa:ZK856.1 GeneID:179413
KEGG:cel:CELE_ZK856.1 UCSC:ZK856.1 CTD:43434 WormBase:ZK856.1
HOGENOM:HOG000007610 InParanoid:Q23639 KO:K10612 OMA:EVTTFQM
NextBio:905286 Uniprot:Q23639
Length = 765
Score = 478 (173.3 bits), Expect = 3.0e-51, Sum P(2) = 3.0e-51
Identities = 161/597 (26%), Positives = 282/597 (47%)
Query: 74 DEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNE-----VGLTCFRDLVY 128
D +L +K W+ L F +D RRS+P E V L + ++++
Sbjct: 74 DGSLLIGYIKEWNRFYQQANILPLPFKKIDESS-RRRSVPETPEESIRTVMLEKWNEIIF 132
Query: 129 TELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEI----GMGQMDYYENDFETAML 184
++ ++ + L+ +ER+G ID + + + FV + G + Y FE +
Sbjct: 133 MNISEQLLVEALRLVKEERDGNIIDAQNVIGIRESFVALNDRAGEDPLLVYRQSFERQFI 192
Query: 185 KDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL--HSSSEPKLLEKVQHEL 242
+ T YY + N + E +YM+ A++ L+ E+ R YL +S + K +EK L
Sbjct: 193 EQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSPTSGKHMEKAVIAL 252
Query: 243 LSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTAL 302
+ + + +L + C L+ VE L R++RL + G+D V H+ EG
Sbjct: 253 VESFEDTILAE----CSKLIASKDVERLQRLYRLIRRTRSGIDTVLKCIDTHIRTEGL-- 306
Query: 303 VKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFE 362
D +N AE + + +V++++ + DK+ + V + F + + +AF
Sbjct: 307 ----NDMRNN--AEN---LSTDPERYVQQLLLMFDKFSSLVREGFCDDARLLTARDKAFR 357
Query: 363 VFCN------------KG---VAGSSSAELLATFCDNILKKGG-SEKLSDEAIEEMLEKV 406
N KG S AELLA +CD +L+K S+KL+ E I+E L +V
Sbjct: 358 AVVNDSSIFKTEMMNKKGRTLSVESKCAELLANYCDLLLRKTQLSKKLTSEEIDEKLNQV 417
Query: 407 VKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCG--GQFTSKMEGM 464
+ +L Y+ +KD+F F+R L+RRL+ + SA+ + E ++TKL++ CG +K+ M
Sbjct: 418 LLVLKYVENKDVFMRFHRAHLSRRLILEMSADQEKEEMMVTKLRE-CGMPSDAVNKLSRM 476
Query: 465 VTDLTLARENQTSFEEYLSN-NPNANPGIDLTVTVLTTGFWPSYKS--FDLNLPAEMVKC 521
+ D+ L ++ +SF++ L+ N N + + + VL G W S +LP E+
Sbjct: 477 LQDIELNKDMNSSFKKALTGTNNNKSIADSINMKVLNGGAWGRGGSERIRFSLPRELEDF 536
Query: 522 VEVFREFYQTKTKHRKLTWIY--SLGTCNLLGKFESRTTELIVTTYQASALLLFN--SSD 577
V FY+ + RKL W++ S GT + G +L TT+Q + L FN + D
Sbjct: 537 VPEMEAFYKKQHNGRKLCWMHHWSSGTM-VFGTANGGRFDLECTTFQMAVLFCFNDRAHD 595
Query: 578 RLSYSEIMTQLNLSDDDVVRLLHSLSC---AKYKILNKEPNTKTISPTDHFEFNSKF 631
++S + L D ++ R L SL +Y+IL + + T++ D F ++KF
Sbjct: 596 KISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTARD-FTDSTKF 651
Score = 116 (45.9 bits), Expect = 3.0e-51, Sum P(2) = 3.0e-51
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 659 RRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDK 718
R + IV+I+K+RK QL +E VE L +F P+ K IK++I+ LI Y+ER
Sbjct: 696 RELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMERRA 755
Query: 719 SNPNMFRYLA 728
+ N F Y++
Sbjct: 756 DDINTFVYIS 765
>ZFIN|ZDB-GENE-030131-5426 [details] [associations]
symbol:cul5a "cullin 5a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-5426 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX572630
IPI:IPI00836478 Ensembl:ENSDART00000110111 ArrayExpress:F1REN0
Bgee:F1REN0 Uniprot:F1REN0
Length = 780
Score = 462 (167.7 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 135/527 (25%), Positives = 253/527 (48%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---YYE 176
L + + +++ + +++D+ + L+ ER GE D L+ V + +V + D Y
Sbjct: 140 LDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYR 199
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
++FE + L T +Y +A +++ ++ +YM A+ L+ E+ R YL + E ++
Sbjct: 200 DNFEKSYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLREEEKRALRYLETRRECNSVQ 259
Query: 237 KVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVT 296
+ ++ E + C +++ ++ + L MF L K+P G++P+ ++H+
Sbjct: 260 ALMECCVNALVTSFKETILAECPGMIKRNETDKLHLMFSLMDKVPNGIEPMLKDLEEHII 319
Query: 297 AEGTA-LVKLAEDAASNKKAEKRDVVGLQEQV--FVRKVIE-------LHDK-YLAYVND 345
+ G A +V AE ++ + ++ L + V++ + DK Y A VND
Sbjct: 320 SAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVND 379
Query: 346 CFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGG-SEKLSDEAIEEMLE 404
T+F L + K S ELLA +CD +L+K S+KL+ E IE L+
Sbjct: 380 A----TIFKLELPMKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEDIELKLK 435
Query: 405 KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQ-CGGQFTSKMEG 463
+V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+
Sbjct: 436 EVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLAR 495
Query: 464 MVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWP--SYKSFDLNLPAEMVKC 521
M D+ ++ + F+E +N A P + + +L G W S K F ++LP E+
Sbjct: 496 MFQDIKVSEDLNQVFKEMHKHNKLALPADSVNIKILNAGAWSRSSEKVF-VSLPTELEDL 554
Query: 522 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDR--L 579
+ +FY+ RKL W + + + K E +L VTT+Q + L +N R +
Sbjct: 555 IPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKI 614
Query: 580 SYSEIMTQLNLSDDDVVRLLHSLSC---AKYKILNKEPNTKTISPTD 623
S+ + L D ++ R L SL K ++L EP SP D
Sbjct: 615 SFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVS--SPKD 659
Score = 129 (50.5 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 666 SIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFR 725
+I++IMK RK + + QL E VE L MF P K IK++IE LI Y++RD+++ N F
Sbjct: 718 AIIQIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFI 777
Query: 726 YLA 728
Y+A
Sbjct: 778 YMA 780
>FB|FBgn0039632 [details] [associations]
symbol:Cul-5 "Cullin-5" species:7227 "Drosophila
melanogaster" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0016360 "sensory organ precursor cell
fate determination" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007293 "germarium-derived
egg chamber formation" evidence=IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IMP] [GO:0007295 "growth
of a germarium-derived egg chamber" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014297 GO:GO:0008285 GO:GO:0007528 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0016360 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0008582 GO:GO:0007293 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:43434 KO:K10612 OMA:EVTTFQM FlyBase:FBgn0039632
EMBL:BT133427 RefSeq:NP_651665.2 UniGene:Dm.5893 SMR:Q9VAQ0
IntAct:Q9VAQ0 MINT:MINT-906434 STRING:Q9VAQ0
EnsemblMetazoa:FBtr0085417 GeneID:43434 KEGG:dme:Dmel_CG1401
UCSC:CG1401-RA InParanoid:Q9VAQ0 GenomeRNAi:43434 NextBio:833902
Uniprot:Q9VAQ0
Length = 852
Score = 515 (186.3 bits), Expect = 1.4e-47, P = 1.4e-47
Identities = 171/655 (26%), Positives = 302/655 (46%)
Query: 114 PLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMG--- 170
P+ ++ L + ++ ++ +++++ + ++ ER G+ D L+ V + +V +
Sbjct: 212 PVRKLMLDSWNKHIFHDIKHRLQESAMKIVHAERNGDAYDAQLVVGVRESYVNLSSNAED 271
Query: 171 QMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSS 230
+++ Y +FE A LK T +Y K++ E+ YM A+ L+ E+ R YL SS
Sbjct: 272 KLEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKRYLEPSS 331
Query: 231 EPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGL--DPVS 288
L + + L+ + N ++ + C AL+RD + E L+ MFRL ++ G+ +P+
Sbjct: 332 FSILTYTLVNVLIVDHLNSIIAE----CPALIRDYETERLNLMFRLMDRVMHGVGVEPMM 387
Query: 289 NIFKQHVTAEGTALVKLAEDAA---SNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVND 345
++H+ + G A + A + S K E+ + + VR ++L +
Sbjct: 388 GDLQRHIMSAGLADMLSASEVITQDSEKYVERLLELFNKFSDLVRNAFNDDPRFLTARDI 447
Query: 346 CFQ---NHTLFHKSLKEAFEVFCNKGVA----GSSSAELLATFCDNILKKGG-SEKLSDE 397
F+ N T K E N+GV S ELLA +CD +L++ S++L+ E
Sbjct: 448 AFKTVVNDTSVFKM--ELPTSIANRGVKYTAPESKCPELLANYCDMLLRRTPLSKRLTSE 505
Query: 398 AIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQ-CGGQ 456
I+ L V+ +L Y+++KD+F +++ L RRL+ SA+ + E I+ L++
Sbjct: 506 QIDARLRDVLLVLKYVNNKDVFMRYHKVHLTRRLILGTSADSEKEEDIVEWLREVGMPAD 565
Query: 457 FTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKS-FDLNLP 515
+ +++ M D+ ++ + T F +S + N + +L G W ++LP
Sbjct: 566 YVNRLARMFQDIKVSEDLNTQFRTSISRHDAIN------IKILNAGAWARCSERVSVSLP 619
Query: 516 AEMVKCVEVFREFYQTKTKHRKLTWIYSL--GTCNLLGKFESRTTELIVTTYQASALLLF 573
E+ + EFY+ K RKL W + + GT + F R +L VTT+Q + L +
Sbjct: 620 IELEDYIPDVEEFYKKKHSGRKLQWYHHMSNGTITFVNNF-GRY-DLDVTTFQMAVLFAW 677
Query: 574 NSS--DRLSYSEIMTQLNLSDDDVVRLLHSLSC---AKYKILNKEP----NTKTISPTDH 624
N D++SY + L D ++ R L SL K +IL EP + K +
Sbjct: 678 NQRQHDKISYENLRLATELPDPELRRTLWSLVAFPKIKKQILLMEPAAISSPKDFAENTM 737
Query: 625 FEFNSKFT-----DKMRRIKI------PLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKS 673
F N +F RR K+ L R +I++IMK
Sbjct: 738 FYINQEFAIVKNGKSQRRGKLNLIGRLQLSTERSQQEDNQSIVQLRILRTQEAIIKIMKV 797
Query: 674 RKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 728
RK + + L E ++ L MF P K IK+++E LI Y+ RD + NMF Y+A
Sbjct: 798 RKRMNNAALQGELIDILKNMFLPSKKMIKEQLEWLIENKYMRRDDDDINMFIYVA 852
>SGD|S000002290 [details] [associations]
symbol:CDC53 "Cullin" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=IMP;IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 SGD:S000002290
GO:GO:0005634 GO:GO:0005737 GO:GO:0000086 GO:GO:0051301
GO:GO:0000082 EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030674 GO:GO:0003688 GO:GO:0019005 eggNOG:COG5647
SUPFAM:SSF75632 EMBL:X96876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 EMBL:U43564 EMBL:Z74180 PIR:S67675
RefSeq:NP_010150.1 PDB:3O2P PDB:3O6B PDBsum:3O2P PDBsum:3O6B
ProteinModelPortal:Q12018 SMR:Q12018 DIP:DIP-1234N IntAct:Q12018
MINT:MINT-384023 STRING:Q12018 PaxDb:Q12018 PeptideAtlas:Q12018
EnsemblFungi:YDL132W GeneID:851424 KEGG:sce:YDL132W CYGD:YDL132w
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY OrthoDB:EOG4W3WW4 EvolutionaryTrace:Q12018
NextBio:968633 Genevestigator:Q12018 GermOnline:YDL132W
Uniprot:Q12018
Length = 815
Score = 379 (138.5 bits), Expect = 1.4e-39, Sum P(3) = 1.4e-39
Identities = 119/485 (24%), Positives = 225/485 (46%)
Query: 172 MDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSE 231
++ Y FE LK T YY++ ++++ + S +Y+ +A E +KRE+ ++ Y ++
Sbjct: 217 LNVYIQVFEKPFLKKTQEYYTQYTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWDDHTK 276
Query: 232 PKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRL-FSKIPRGLDPVSNI 290
L + L++ + +L E E +K+ L + R F+ IPR N
Sbjct: 277 KPLSMALNKVLITDHIEKL-ENEFVVLLDARDIEKITSLYALIRRDFTLIPRMASVFENY 335
Query: 291 FKQHVTAEGTALVKLAE-DAASNKKAEKRDVV-----GLQEQVFVRKVIELHDKYLAYVN 344
K+ E ++L+ + + + N+ A + + L + +++K++E+HD + N
Sbjct: 336 VKKTGENEISSLLAMHKHNIMKNENANPKKLALMTAHSLSPKDYIKKLLEVHDIFSKIFN 395
Query: 345 DCFQNHTLFHKSLKEAFEVFCNKGV----AGS------SSAELLATFCDNILKKGGSEKL 394
+ F + K+L A F N AGS ++E+LA + D +LKK ++
Sbjct: 396 ESFPDDIPLAKALDNACGAFININEFALPAGSPKSATSKTSEMLAKYSDILLKKATKPEV 455
Query: 395 SDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCG 454
+ + +E ++ + Y++DKD F YR+ A+RL+ S + + E +I+ +L+
Sbjct: 456 ASDMSDE---DIITIFKYLTDKDAFETHYRRLFAKRLIHGTSTSAEDEENIIQRLQAANS 512
Query: 455 GQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGI--DLTVTVLTTGFWP-SYKSFD 511
++T K+ M D+ L++ + F L N P+ + DL VL WP SY+ +
Sbjct: 513 MEYTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKYPDLQPFVLAENMWPFSYQEVE 572
Query: 512 LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNL---LGKFESRTTELIVTTYQAS 568
LP E+V E +E Y K R L W++ L L +GK VT +Q +
Sbjct: 573 FKLPKELVPSHEKLKESYSQKHNGRILKWLWPLCRGELKADIGKPGRMPFNFTVTLFQMA 632
Query: 569 ALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPN--TKTISPTDHFE 626
LLL+N +D L+ I +L+ + + + K+K++ + P + P F+
Sbjct: 633 ILLLYNDADVLTLENIQEGTSLTIQHIAAAM--VPFIKFKLIQQVPPGLDALVKPETQFK 690
Query: 627 FNSKF 631
+ +
Sbjct: 691 LSRPY 695
Score = 204 (76.9 bits), Expect = 9.8e-20, Sum P(3) = 9.8e-20
Identities = 91/434 (20%), Positives = 191/434 (44%)
Query: 37 FSSEDYMMLYTYLFQPHLVSAFVNILLLVLPSIREKHDEFMLRELVKRWSNHKVMVRWLS 96
FS++ T L + N L + + ++ + E L+ VKRW + +L+
Sbjct: 69 FSTDSRTGQSTILVGSEIYEKLKNYLKNYILNFKQSNSETFLQFYVKRWKRFTIGAIFLN 128
Query: 97 RFFHYLDRYFI------ARRSLPPLNEVGLTCFRDLVYTELNGKVRDAVITLIDQEREGE 150
F Y++RY++ +R + +N + L ++++++ + + ++ + REG+
Sbjct: 129 HAFDYMNRYWVQKERSDGKRHIFDVNTLCLMTWKEVMFDPSKDVLINELLDQVTLGREGQ 188
Query: 151 QIDRALLKNVLDIFVEIGMGQMDY-------YENDFETAMLKDTAAYYSRKASNWILEDS 203
I R+ + + V +G+ D Y FE LK T YY++ ++++ + S
Sbjct: 189 IIQRSNISTAIKSLVALGIDPQDLKKLNLNVYIQVFEKPFLKKTQEYYTQYTNDYLEKHS 248
Query: 204 CPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALL- 262
+Y+ +A E +KRE+ ++ Y ++ L + L++ + +L E E LL
Sbjct: 249 VTEYIFEAHEIIKREEKAMTIYWDDHTKKPLSMALNKVLITDHIEKL-ENEFV---VLLD 304
Query: 263 -RD-DKVEDLSRMFRL-FSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRD 319
RD +K+ L + R F+ IPR ++++F+ +V G +++ A +K ++
Sbjct: 305 ARDIEKITSLYALIRRDFTLIPR----MASVFENYVKKTGEN--EISSLLAMHKHNIMKN 358
Query: 320 VVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAF--EVFCNKGVAGSSSAEL 377
+++ + L K Y+ + H +F K E+F ++ K + + A +
Sbjct: 359 ENANPKKLALMTAHSLSPK--DYIKKLLEVHDIFSKIFNESFPDDIPLAKALDNACGAFI 416
Query: 378 LATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDK-DLFAEFYRKKLAR--RLLFD 434
+ GS K + EML K +L + K ++ ++ + + + L D
Sbjct: 417 NI---NEFALPAGSPKSATSKTSEMLAKYSDILLKKATKPEVASDMSDEDIITIFKYLTD 473
Query: 435 KSANDDHERSILTK 448
K A + H R + K
Sbjct: 474 KDAFETHYRRLFAK 487
Score = 118 (46.6 bits), Expect = 1.4e-39, Sum P(3) = 1.4e-39
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 659 RRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDK 718
R+ ++A IVRIMK+++ L H LV EC+ Q + F +K+ I+ LI + YL+R
Sbjct: 747 RQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAIDSLIQKGYLQRGD 806
Query: 719 SNPNMFRYLA 728
+ + YLA
Sbjct: 807 DGES-YAYLA 815
Score = 44 (20.5 bits), Expect = 1.4e-39, Sum P(3) = 1.4e-39
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 10 DLEQGWEFMQKGITKL 25
DLE W F++ GI ++
Sbjct: 10 DLEATWNFIEPGINQI 25
>CGD|CAL0005748 [details] [associations]
symbol:orf19.7497 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0005748 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
EMBL:AACQ01000039 RefSeq:XP_718654.1 ProteinModelPortal:Q5AAJ3
STRING:Q5AAJ3 GeneID:3639684 KEGG:cal:CaO19.7497 Uniprot:Q5AAJ3
Length = 859
Score = 194 (73.4 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 60/235 (25%), Positives = 106/235 (45%)
Query: 367 KGVAGSSSAELLATFCDNILK---KGGSEKL-----SDEAIEEMLEKVVKLLAYISDKDL 418
+G A ++ ELL+ + D +K KG S S + E+++ ++ L +I DKD
Sbjct: 428 RGPASVNAPELLSVYMDYFIKQLTKGSSSNKDISLKSGDQTEDLISNSIQFLRFIKDKDA 487
Query: 419 FAEFYRKKLARRLLFDK-----SANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARE 473
F Y A+R L K S+N D E IL KL ++ G K+ M D+ +++
Sbjct: 488 FEANYANHFAKRFLNSKTGNSPSSNKDIEEIILAKLSEEMGTSSLDKVIKMNRDVRSSKD 547
Query: 474 NQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPS-----YKSFD--------LNLPAEMVK 520
++ YL+ + +++ + + WP YK F P ++
Sbjct: 548 TTNDWKRYLNKQSKSTDLVEMELKICNVTDWPKSMTKDYKWFSRTENEETPFKWPRQLRN 607
Query: 521 CVEVFREFYQT--KTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLF 573
++ F EF+ K ++ L W G+ +L + SRT E+ ++T+ A +LLF
Sbjct: 608 TIKQFDEFWSNGKKNDNKSLYWSPKFGSMDLRITYPSRTYEINLSTFAAIIMLLF 662
Score = 188 (71.2 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 64/277 (23%), Positives = 129/277 (46%)
Query: 9 IDLEQGWEFMQKGITKLKNI-LEGLPEPQFSSEDYMMLYTYLFQPHLVSAFVNILLLVLP 67
ID ++ W + I++++N + L Q + Y+++ F L N++ L
Sbjct: 34 IDFDKNWSVLSSAISQIQNKNVSNLSYEQLYRKAYVLVLRK-FGGKLYDNVANVIKTHLL 92
Query: 68 SIREK-------HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGL 120
+ REK HD FM + +++ WS H ++++S YL++ ++A + ++G+
Sbjct: 93 TRREKLLSVSANHDLFM-QSILQEWSEHLQAMKFISDVLMYLNKVYVAEHKKLLIYDLGI 151
Query: 121 TCFRDLV--YT--ELNGKVRDAVITLIDQEREGEQIDRAL----LKNVLDIFVEIGMGQM 172
F+D V Y E+ K+ + VI I + R G I ++ + N++++ VE G
Sbjct: 152 QLFKDYVIKYNNDEVGSKIVNMVIDEIAKSRTGVVITSSMYITKIINMMELLVEPS-GSS 210
Query: 173 D------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL 226
D YY+ FE LK + + ++ + Y+ + +K E +RV YL
Sbjct: 211 DILFGDSYYQIKFEPKFLKSSEESLYNLSQEFVSHNLGTKYLQLTTQFIKDEDNRVRFYL 270
Query: 227 HSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLR 263
S+ PKL+E + + ++ ++++ + G L+
Sbjct: 271 PPSTYPKLVELMNNIMIKDKIDKMILSSNQGLEYWLK 307
Score = 173 (66.0 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 59/290 (20%), Positives = 121/290 (41%)
Query: 174 YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPK 233
YY+ FE LK + + ++ + Y+ + +K E +RV YL S+ PK
Sbjct: 218 YYQIKFEPKFLKSSEESLYNLSQEFVSHNLGTKYLQLTTQFIKDEDNRVRFYLPPSTYPK 277
Query: 234 LLEKVQHELLSVYANQLLEKEHSGCHALLR--------DDKVE-----DLSRMFRLFSKI 280
L+E + + ++ ++++ + G L+ D +E DL ++ L +
Sbjct: 278 LVELMNNIMIKDKIDKMILSSNQGLEYWLKPVVSNIFEDTNIETYHYADLKMLYNLIGRF 337
Query: 281 PRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYL 340
+ K+ + A+G +L + N ++ + ++ +++ D+ +
Sbjct: 338 DDEYQLLRLRLKEAIVAQGNSLPDYVRSSIENSGKKQSNNSPAFATKWIETILKYRDQLM 397
Query: 341 AYVNDCFQNHTLFHKSLKEAFEVFCN----KGVAGSSSAELLATFCDNILK---KGGSEK 393
+ F + + ++ A F N +G A ++ ELL+ + D +K KG S
Sbjct: 398 QVWKNSFDENLMIEQTFTFAMRDFINGSNKRGPASVNAPELLSVYMDYFIKQLTKGSSSN 457
Query: 394 L-----SDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSAN 438
S + E+++ ++ L +I DKD F Y A+R L K+ N
Sbjct: 458 KDISLKSGDQTEDLISNSIQFLRFIKDKDAFEANYANHFAKRFLNSKTGN 507
Score = 168 (64.2 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 31/70 (44%), Positives = 50/70 (71%)
Query: 659 RRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDK 718
R+ ++A+IVRI+KSR+ + H L+ E ++QL F+P IK+RIEDLI ++YL+RD
Sbjct: 790 RKIEVNAAIVRILKSRQSIKHNDLIEELLKQLSNRFQPSIILIKQRIEDLIDKEYLKRDT 849
Query: 719 SNPNMFRYLA 728
+ N++ Y+A
Sbjct: 850 DDRNLYHYIA 859
Score = 115 (45.5 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 34/125 (27%), Positives = 64/125 (51%)
Query: 532 KTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLF----NSSD---------- 577
K ++ L W G+ +L + SRT E+ ++T+ A +LLF ++D
Sbjct: 621 KNDNKSLYWSPKFGSMDLRITYPSRTYEINLSTFAAIIMLLFAPQSTNADGSTVSAFDEM 680
Query: 578 -RLSYSEIMTQLNLSDDDVVRLLHSLSCA-KYKILNKEPNTKTISPTDHFEFNSKFTDKM 635
L+Y EI+ + + ++ R L S++ A K ++L K P +K ++ D F+ N+KF
Sbjct: 681 KELTYEEILELTGIPEPELKRHLQSIAVAPKSRLLVKVPMSKDVNKNDVFKLNAKFKSPS 740
Query: 636 RRIKI 640
++K+
Sbjct: 741 VKVKV 745
>ZFIN|ZDB-GENE-091113-45 [details] [associations]
symbol:cul5b "cullin 5b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-091113-45 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:CT827807
IPI:IPI00897211 Ensembl:ENSDART00000130179 Bgee:F1QFY1
Uniprot:F1QFY1
Length = 795
Score = 345 (126.5 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 107/387 (27%), Positives = 188/387 (48%)
Query: 269 DLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTA-LVKLAEDAASNKKAEKRDVVGLQEQV 327
+L MF L K+P G++P+ + H+ + G A +V AE ++ + ++ L +
Sbjct: 307 ELHLMFSLMDKVPSGIEPMLKDLEDHIMSAGLADMVASAETITTDSEKYVEQLLTLFNRF 366
Query: 328 --FVRKVIE-------LHDK-YLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAEL 377
V++ + DK Y A VND T+F L + K S EL
Sbjct: 367 SKLVKEAFQDDPRFLTSRDKAYKAVVNDA----TIFKLELPLKQKGVSLKTQPESKCPEL 422
Query: 378 LATFCDNILKKGG-SEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKS 436
LA +CD +L+K S+KL+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D S
Sbjct: 423 LANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDIS 482
Query: 437 ANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLT 495
A+ + E +++ L++ + +K+ M D+ ++ + SF+E +N A P +
Sbjct: 483 ADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHNKLALPADSVN 542
Query: 496 VTVLTTGFWP--SYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ +L G W S K F ++LP E+ + +FY+ RKL W + + + K
Sbjct: 543 IKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKN 601
Query: 554 ESRTTELIVTTYQASALLLFNSS--DRLSYSEIMTQLNLSDDDVVRLLHSLSC---AKYK 608
E +L VTT+Q + L +N +R+S+ + L D ++ R L SL K +
Sbjct: 602 EVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKRQ 661
Query: 609 ILNKEP---NTKTISPTDHFEFNSKFT 632
+L+ EP + K + F N +F+
Sbjct: 662 VLSYEPVVGSPKDFAEGTVFSINQEFS 688
Score = 182 (69.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 55/265 (20%), Positives = 120/265 (45%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMG---QMDYYE 176
L + + ++ + +++D+ + L+ ER GE D L+ V + +V + ++ Y
Sbjct: 140 LDTWNESIFCNIKSRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNTDDKLQIYR 199
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
+FE + L T +Y +A +++ ++ +YM A+ L+ E+ R YL + E ++
Sbjct: 200 ENFEKSYLDSTERFYKTQAPSYLQQNGVQNYMKYADGKLREEEKRALRYLETRRECNSVQ 259
Query: 237 KVQHELLSVYANQLLEKEHSGCHALLRDDKVE---------------DLSRMFRLFSKIP 281
+ ++ E + C +++ ++ E +L MF L K+P
Sbjct: 260 ALMECCVNALVTSFKETILTECPGMIKRNETESEYGRSSGTKGSASSELHLMFSLMDKVP 319
Query: 282 RGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLA 341
G++P+ + H+ + G LA+ AS AE + + +V +++ L +++
Sbjct: 320 SGIEPMLKDLEDHIMSAG-----LADMVAS---AE---TITTDSEKYVEQLLTLFNRFSK 368
Query: 342 YVNDCFQNHTLFHKSLKEAFEVFCN 366
V + FQ+ F S +A++ N
Sbjct: 369 LVKEAFQDDPRFLTSRDKAYKAVVN 393
Score = 130 (50.8 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 666 SIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFR 725
+I++IMK RK + + QL E VE L MF P K IK++IE LI Y++RD+++ N F
Sbjct: 733 AIIQIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFI 792
Query: 726 YLA 728
Y+A
Sbjct: 793 YMA 795
>SGD|S000003235 [details] [associations]
symbol:CUL3 "Ubiquitin-protein ligase" species:4932
"Saccharomyces cerevisiae" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IC;ISS] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IMP;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 SGD:S000003235 GO:GO:0005634 GO:GO:0005737
EMBL:BK006941 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787 GO:GO:0031463
InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869 OrthoDB:EOG48H0BR
EMBL:AY387706 EMBL:Z72788 PIR:S64292 RefSeq:NP_011517.1
ProteinModelPortal:P53202 SMR:P53202 DIP:DIP-5506N IntAct:P53202
MINT:MINT-531464 STRING:P53202 PaxDb:P53202 EnsemblFungi:YGR003W
GeneID:852886 KEGG:sce:YGR003W CYGD:YGR003w HOGENOM:HOG000112081
OMA:SERSMLV NextBio:972541 Genevestigator:P53202 GermOnline:YGR003W
Uniprot:P53202
Length = 744
Score = 404 (147.3 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 167/747 (22%), Positives = 335/747 (44%)
Query: 12 EQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTYLFQ---PHLVSAFVNILLLVLPS 68
E+ WE ++ I + + + + + F + Y +YT + P L + + L+ L
Sbjct: 23 EESWETVKYAIDHIYS--DDMADLSFE-QVYKTIYTIVLNKKGPILYNRLKDYLIQKLAL 79
Query: 69 IREK------HDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTC 122
+RE HD L + + W + Y+D+ + + ++ L
Sbjct: 80 LRETIVKDNTHDYEFLGTMARLWEVQCHCFKITGDLMMYMDKVYCKPNRCMEVYDMCLDL 139
Query: 123 FRDLVYTELNGKVRDAVITLIDQEREGEQIDR---ALLKNVLDIFVEIGMGQMDYYENDF 179
FR + + + + A+I+ I++ R +D +L K ++ + + + ++ DF
Sbjct: 140 FRIEILQKCSSSLISALISDIERIRNLGSVDSEHTSLWKVLIGMMETLHDNRDSFFLTDF 199
Query: 180 ETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRV-SHYLHSSSEPKLLEKV 238
E ++ T YY+ KA + +E P L+ L++ + + S +L+ S KL +
Sbjct: 200 EPVLISATEEYYN-KAID--IELLTPIESLEKIRKLRQFESMLDSSFLNVDSHNKLKTVL 256
Query: 239 QHELLSVYANQLLEK-EHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTA 297
++ L+ + ++E H ++ + K+ L ++ L S+ + + +I K ++
Sbjct: 257 ENVLIWGKLSDIIEDLTHEAM--VISNGKL--LQEIYDLSSEEKYRVTVIESI-KSYINK 311
Query: 298 EGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHT--LFHK 355
+ + + + KK + + E V + + + + + + N T + +
Sbjct: 312 NA---INIPFNEGNRKKGQNA-ITWSSEIVELYRSQHSFLESIDFGSVRLNNLTGDVSNA 367
Query: 356 SLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISD 415
L + F ++ +K G+ +E L+T+ D+ +K+ + I++ L KL+ +++
Sbjct: 368 ILGDVFSMYFSK--EGALPSEYLSTYVDHCMKRTKEKDAEIVKIKQDLLDSTKLIGLLTE 425
Query: 416 KDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 475
KD+F + Y+K+L+RRLL +S + E+ ++ +K+ G FTSK+E M+ D++L+ E
Sbjct: 426 KDIFEKIYKKQLSRRLLQQRSLVEI-EKWMVQMIKKVLGTFFTSKLEIMLRDISLSSEMY 484
Query: 476 TSFEEYLSNNPNANPGIDLTVTVLTTGFWP--SYKSFD--LNLPAEMVKCVEVFREFYQT 531
+F+ + N+ + VLT WP S D ++LP M + + F +Y
Sbjct: 485 QAFQH---STINSIEYLSFAPQVLTRTSWPFQSTNPIDEGISLPPRMSQILAGFEGYYSL 541
Query: 532 KTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLS 591
K K R L W + L + +F S E+ + Y LLF + L+ EI ++
Sbjct: 542 KYKERVLKWAHHLSVIEIGCQFNSGYYEISFSVYAGVIFLLFEDYEELTLGEIYELTHIP 601
Query: 592 DDDVVRLLHSLSCA-KYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL---PPXXX 647
DDV L+ S+S + KIL K ++ + F N F+ R++K+P+ P
Sbjct: 602 IDDVKSLVMSMSTIPRCKILKKSSSSGNMK----FSVNYFFSSPNRKVKVPVIACPLPSQ 657
Query: 648 XXXXXXXXXXXRRY------AIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAI 701
Y + A IVRIMK+ L HQQL+ ++ +
Sbjct: 658 KSDNLATASSVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSIL 717
Query: 702 KKRIEDLITRDYLERDKSNPNMFRYLA 728
K+ I+ LI ++Y++R+ +P+ + YL+
Sbjct: 718 KRSIQLLIEKEYIQRNADDPSYYHYLS 744
>UNIPROTKB|F1SR60 [details] [associations]
symbol:F1SR60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
GeneTree:ENSGT00550000074299 Ensembl:ENSSSCT00000017678 OMA:FNHRARI
Uniprot:F1SR60
Length = 308
Score = 279 (103.3 bits), Expect = 6.9e-34, Sum P(2) = 6.9e-34
Identities = 68/193 (35%), Positives = 104/193 (53%)
Query: 544 LGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLS 603
+G + G +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+
Sbjct: 117 VGGAQVTGS-NTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 175
Query: 604 CAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXX 655
C K ++L KEP +K I F N +FT K+ R+KI
Sbjct: 176 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 235
Query: 656 XXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLE 715
R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL
Sbjct: 236 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 295
Query: 716 RDKSNPNMFRYLA 728
R + ++ Y+A
Sbjct: 296 RTPEDRKVYTYVA 308
Score = 124 (48.7 bits), Expect = 6.9e-34, Sum P(2) = 6.9e-34
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 491 GIDLTVTVLTTGFWPSYKSFD-LNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNL 549
G+DLTV VLTTG+WP+ + N+P E+FR FY K R+LT + +G+ +L
Sbjct: 40 GVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADL 99
Query: 550 LGKF 553
F
Sbjct: 100 NATF 103
Score = 42 (19.8 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF + K+ GSE
Sbjct: 96 SADLNATFYGPVKKEDGSE 114
>UNIPROTKB|F1P9Q4 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:AAEX03003515 Ensembl:ENSCAFT00000023239 Uniprot:F1P9Q4
Length = 715
Score = 348 (127.6 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 108/378 (28%), Positives = 183/378 (48%)
Query: 269 DLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTA-LVKLAEDAASNKKAEKRDVVGLQEQV 327
+L MF L K+P G++P+ ++H+ + G A +V AE ++ + ++ L +
Sbjct: 302 ELHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRF 361
Query: 328 --FVRKVIE-------LHDK-YLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAEL 377
V++ + DK Y A VND T+F L + K S EL
Sbjct: 362 SKLVKEAFQDDPRFLTARDKAYKAVVNDA----TIFKLELPLKQKGVGLKTQPESKCPEL 417
Query: 378 LATFCDNILKKGG-SEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKS 436
LA +CD +L+K S+KL+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D S
Sbjct: 418 LANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDIS 477
Query: 437 ANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLT 495
A+ + E +++ L++ + +K+ M D+ ++ + +F+E NN A P +
Sbjct: 478 ADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVN 537
Query: 496 VTVLTTGFWP--SYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKF 553
+ +L G W S K F ++LP E+ + EFY+ RKL W + + + K
Sbjct: 538 IKILNAGAWSRSSEKVF-VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKN 596
Query: 554 ESRTTELIVTTYQASALLLFNSSDR--LSYSEIMTQLNLSDDDVVRLLHSLSC---AKYK 608
E +L VTT+Q + L +N R +S+ + L D ++ R L SL K +
Sbjct: 597 EVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQ 656
Query: 609 ILNKEPNTKTISPTDHFE 626
+L EP SP D E
Sbjct: 657 VLLYEPQVN--SPKDFTE 672
Score = 196 (74.1 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 60/266 (22%), Positives = 124/266 (46%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---YYE 176
L + + +++ + +++D+ + L+ ER GE D L+ V + +V + D Y
Sbjct: 135 LDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYR 194
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLE 236
++FE A L T +Y +A +++ ++ +YM A+ LK E+ R YL + E +E
Sbjct: 195 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVE 254
Query: 237 KVQHELLSVYANQLLEKEHSGCHALLRDDK---------VED------LSRMFRLFSKIP 281
+ ++ E + C +++ ++ VED L MF L K+P
Sbjct: 255 ALMECCVNALVTSFKETILAECQGMIKRNETESRYQYLCVEDGSGFSELHLMFSLMDKVP 314
Query: 282 RGLDPVSNIFKQHVTAEGTA-LVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYL 340
G++P+ ++H+ + G A +V AE ++ +EK +V +++ L +++
Sbjct: 315 NGIEPMLKDLEEHIISAGLADMVAAAETITTD--SEK----------YVEQLLTLFNRFS 362
Query: 341 AYVNDCFQNHTLFHKSLKEAFEVFCN 366
V + FQ+ F + +A++ N
Sbjct: 363 KLVKEAFQDDPRFLTARDKAYKAVVN 388
>FB|FBgn0036332 [details] [associations]
symbol:CG11261 species:7227 "Drosophila melanogaster"
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00884 EMBL:AE014296 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HSSP:Q9JLV5 EMBL:AY069566 RefSeq:NP_648620.1 UniGene:Dm.950
SMR:Q9VU33 EnsemblMetazoa:FBtr0075899 GeneID:39474
KEGG:dme:Dmel_CG11261 UCSC:CG11261-RA FlyBase:FBgn0036332
InParanoid:Q9VU33 OMA:IVRIMER OrthoDB:EOG4DZ09D GenomeRNAi:39474
NextBio:813830 Uniprot:Q9VU33
Length = 670
Score = 324 (119.1 bits), Expect = 6.5e-26, P = 6.5e-26
Identities = 119/454 (26%), Positives = 204/454 (44%)
Query: 287 VSNIFK--QHVTAEGTALVKLAEDAASNKKAEKRDVVG-LQEQVFVRKVIELHDKYLAYV 343
VSN +K +H + E+ K KR + LQE K + +L
Sbjct: 235 VSNDYKDFKHFLRYACLAMPEIENGTQFKAILKRYLAARLQETRLSGK--DYIQAFLGLC 292
Query: 344 NDCFQNHTLFHKSLKEAFEVFCNKGV--AGS--SSAELLATFCDNILKKGGSEKLSDEAI 399
Q H L E + C + + G LL T+ + ++ K + S+EAI
Sbjct: 293 RGPLQRALRDHTKLAEVVDAVCKEEINRKGQIIDPTRLLVTYANELMTK---RQESEEAI 349
Query: 400 EEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTS 459
+ L+++VK + ++SD+ F + Y K L R + + S +D E + + L ++ T
Sbjct: 350 IDELKRIVKCVEFLSDEYKFIDMYLKALRIRQINETSTSDGVESIMYSLLNKKMANFVTR 409
Query: 460 KMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMV 519
+ + D+ R + F+++L N+ G D S+++F+L LP E+
Sbjct: 410 CIYVQLRDVDKLRTLKKEFQDHL-NSKGIKLGFDFRPKCFKND--GSFENFNLTLPDELQ 466
Query: 520 KCVEVFREFYQT-KTKHRKLTWIYS-LGTCNLLGKFESRTTELIVTTYQASALLLFNSSD 577
+ + FR FY+ K + + + + + L + + L V+T Q + L+LFN +
Sbjct: 467 QAWKEFRIFYEARKLQSKAIIQLNNELSSGEITCHLNQSVYILEVSTLQMAVLMLFNRHE 526
Query: 578 RLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRR 637
R + E++T L + + + L + Y +NK ++ E N FT++ RR
Sbjct: 527 RFTEQELVTALGVELETLQEALKQIKFLVYIEVNK---------VNYIEINMDFTNRKRR 577
Query: 638 I--KIPLP-PXXXXXXXXXXXXXXRR-YAIDASIVRIMKSRKVLGHQQLVLECVEQLGRM 693
+ PLP RR +DA+IVRIMK +K L + +L+ E+L
Sbjct: 578 LFCNEPLPRKMRKIEEKSEIELKIRRDKQVDAAIVRIMKGQKQLEYSELISLVYEELKDR 637
Query: 694 FKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYL 727
KP IKKR++ L+ R+YLERD N++RYL
Sbjct: 638 VKPQVSFIKKRLDYLVEREYLERDNYY-NIYRYL 670
>UNIPROTKB|I3L5Y8 [details] [associations]
symbol:I3L5Y8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 Pfam:PF00888
GO:GO:0006511 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:DECMLRE Ensembl:ENSSSCT00000029748
Uniprot:I3L5Y8
Length = 225
Score = 267 (99.0 bits), Expect = 4.0e-22, P = 4.0e-22
Identities = 54/193 (27%), Positives = 108/193 (55%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLV--YTELNGKV 135
L+ L + W++H+ + + Y+DR ++ + ++ + +GL FRD V Y + +
Sbjct: 30 LQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHL 89
Query: 136 RDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKA 195
R ++ +I +ER+GE +DR ++N + + +G+ YE DFE L+ +A ++ ++
Sbjct: 90 RQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMES 149
Query: 196 SNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEH 255
++ E+S Y+ K E + E +RV H L S+E +++ V+ EL+S + ++E E+
Sbjct: 150 QKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMEN 209
Query: 256 SGCHALLRDDKVE 268
SG +L++ K E
Sbjct: 210 SGLVHMLKNGKTE 222
>UNIPROTKB|F1RUC1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:CU693400
Ensembl:ENSSSCT00000013782 OMA:SSTERED Uniprot:F1RUC1
Length = 700
Score = 289 (106.8 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 80/320 (25%), Positives = 170/320 (53%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE--LNGK 134
L+++ + W NH + + F +LDR ++ + S LP + ++GL FR + ++ + K
Sbjct: 339 LKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNK 398
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI++ER GE IDR+LL+++L + + + Y++ FE L++T Y+ +
Sbjct: 399 TIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRLYAAE 453
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE 254
+ E P+Y+ + L+ E DR+ YL +++ L+ V+ +LL + +L+K
Sbjct: 454 GQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQK- 512
Query: 255 HSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKK 314
G + LL +++++DLS +++LFS++ G+ + + +++ A G+ +V E K
Sbjct: 513 --GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPE----KDK 566
Query: 315 AEKRDVVGLQEQV-FVRKVIEL-HDKYLAYVNDCFQNHTLFHKSLKEAFEVFC----NKG 368
++++ +++V + + L ++K++ + + F+ T +K + E+ +K
Sbjct: 567 TMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFE--TFINKRPNKPAELIAKYVDSKL 624
Query: 369 VAGSSSA--ELLATFCDNIL 386
AG+ A E L D I+
Sbjct: 625 RAGNKEATDEELEKMLDKIM 644
Score = 244 (91.0 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 80/272 (29%), Positives = 138/272 (50%)
Query: 182 AMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHE 241
+ML D Y + LE++ Y + ++ L +E++ V YLH + K LE+
Sbjct: 426 SMLSDLQIYQDSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVN--KRLEEEADR 480
Query: 242 LLSVYANQLLEKEHSGC--HALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
L++ Y +Q +K LL + L + R + +S +++ G
Sbjct: 481 LIT-YLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENR-IQDLSLLYQLFSRVRG 538
Query: 300 TALVKLAEDAASNKKAEKRDVVGLQ-EQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLK 358
V L + K V+ + ++ V+++++ DK ++ CF + F ++K
Sbjct: 539 GVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMK 598
Query: 359 EAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDL 418
EAFE F NK + AEL+A + D+ L+ G E +DE +E+ML+K++ + +I KD+
Sbjct: 599 EAFETFINK--RPNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYGKDV 655
Query: 419 FAEFYRKKLARRLLFDKSANDDHERSILTKLK 450
F FY+K LA+RLL KSA+ D E+S+L+KLK
Sbjct: 656 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK 687
>GENEDB_PFALCIPARUM|PFF1445c [details] [associations]
symbol:PFF1445c "cullin-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0051726 "regulation of
cell cycle" evidence=ISS] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 GO:GO:0000082 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL844505
RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3 PRIDE:C6KTD3
EnsemblProtists:PFF1445c:mRNA GeneID:3885751 KEGG:pfa:PFF1445c
EuPathDB:PlasmoDB:PF3D7_0629800 HOGENOM:HOG000281645
ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 210 (79.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 81/363 (22%), Positives = 167/363 (46%)
Query: 215 LKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLR-----DDKVED 269
+K+ ++ H+++ + + + +LS+Y N LL ++ C L+ + K+++
Sbjct: 506 MKKWREVFEHFINKGIQAETYMPI---ILSMYLNNLLTM-YNACLRKLKKYYILNKKIKN 561
Query: 270 LSRMFR-LFSKIPRG---LDPVSNIFKQH-VTAEGTALVKLAEDAASNKKAEKRDVVGLQ 324
+F L ++ P+S + ++ + ++ + + +K K+D++ +
Sbjct: 562 NRSLFNNLLFEVDWNNYCTQPISETIDFYDISTDSDNMLGIKKYLRKKRKNTKKDLINFE 621
Query: 325 -EQVFV-RKVIEL------HDKYLAYVNDCFQNHTLFHKSLK-EAFEVFCNKGVAGSSSA 375
E+ +V RK ++ H+ + + N+ + N+ +H +L ++ + NK
Sbjct: 622 HEEEYVKRKHMDNNIHNNDHNDNIYFNNNLYFNND-YHNNLYYDSLNI--NKRSDEKIFF 678
Query: 376 ELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDK 435
LL D + KK + + I M+ ++ L Y+SDK+ F ++YR + +RL+ D
Sbjct: 679 HLLKI--DKLFKK---YHIIGKYIMNMITVILSLFRYVSDKEKFEKYYRTYMCKRLINDS 733
Query: 436 SANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNAN-PGIDL 494
S N + + LK++CG QFT K+E ++ D+ + F + L NN N
Sbjct: 734 SFNIILDVKVFKTLKKECGAQFTKKIEIILKDMKFTSKTLMKFYKELPNNVNHFLKRKKY 793
Query: 495 TVTVLTTGFWPSYKSFDLNL--PAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGK 552
V ++ W Y + + N+ P + C E F FYQ K + + ++ LG C L
Sbjct: 794 AVNIIFNESW-EYVNTENNVIYPPMIKMCNEAFFLFYQKYNKSKNIKFLPLLGLCTLRVH 852
Query: 553 FES 555
F++
Sbjct: 853 FKN 855
Score = 119 (46.9 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 58/252 (23%), Positives = 113/252 (44%)
Query: 144 DQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILE-- 201
+ E + Q + + VL + ++I ++ Y+ DFE +T +Y K + +
Sbjct: 303 NHEYKNTQKKKKINDKVLSLSIKIS-DILNLYD-DFERIYKNETYTFYKEKIEKYKKDME 360
Query: 202 ----DSCP-DYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHS 256
+ C D+ + E L E+ R +L +E +L ++ +LL V +L K+
Sbjct: 361 TLGYEECNFDFPIIVENYLCHEQIRSRKFLKEHTEITILNMLK-DLLLVKNRDVLFKDSY 419
Query: 257 GCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAE 316
+ ++++ K + L ++ L+S L+ SNIF V GT LV + +N
Sbjct: 420 IKYCIIKE-KYDPLRSVY-LYSLNLDDLENFSNIFFNVVDNIGTELVNDVINKRNNSSLL 477
Query: 317 KRDVVGLQE-QVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSA 375
++ L ++ V ++I + +Y +Y F K +E FE F NKG+ +
Sbjct: 478 NNAIIKLINFKLNVDRIIIMSFRYSSY----------FMKKWREVFEHFINKGIQAETYM 527
Query: 376 EL-LATFCDNIL 386
+ L+ + +N+L
Sbjct: 528 PIILSMYLNNLL 539
Score = 84 (34.6 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 41/178 (23%), Positives = 74/178 (41%)
Query: 543 SLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSL 602
S T N GK + + VT QA LLLFN + +EI +S ++++R L ++
Sbjct: 950 SSSTYNKKGK---KKIYITVTILQALVLLLFNKKNEYHINEIKELTGISTENIIRYLKTI 1006
Query: 603 -SCAKYKILNKEPNTKTISPTDHFEFNSKF-----TDKMRRIKIPLPPXXXXXXXXXXXX 656
+ + IL + + + F KF D + K + P
Sbjct: 1007 YTIGETHILIYDKANEILKLNFSFRSKKKFLIVNYNDVL--YKDDMGPTTSLLNEDNEIE 1064
Query: 657 XXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYL 714
+ IDA+IV+ +K+ +++ C +M + IK RI L++R+++
Sbjct: 1065 DKTLH-IDAAIVKFLKTNGKSSERKI---CSFIKDKMDISSNEQIKNRISSLLSREFI 1118
>UNIPROTKB|C6KTD3 [details] [associations]
symbol:PFF1445c "Cullin-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0000082
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AL844505 RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3
PRIDE:C6KTD3 EnsemblProtists:PFF1445c:mRNA GeneID:3885751
KEGG:pfa:PFF1445c EuPathDB:PlasmoDB:PF3D7_0629800
HOGENOM:HOG000281645 ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 210 (79.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 81/363 (22%), Positives = 167/363 (46%)
Query: 215 LKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLR-----DDKVED 269
+K+ ++ H+++ + + + +LS+Y N LL ++ C L+ + K+++
Sbjct: 506 MKKWREVFEHFINKGIQAETYMPI---ILSMYLNNLLTM-YNACLRKLKKYYILNKKIKN 561
Query: 270 LSRMFR-LFSKIPRG---LDPVSNIFKQH-VTAEGTALVKLAEDAASNKKAEKRDVVGLQ 324
+F L ++ P+S + ++ + ++ + + +K K+D++ +
Sbjct: 562 NRSLFNNLLFEVDWNNYCTQPISETIDFYDISTDSDNMLGIKKYLRKKRKNTKKDLINFE 621
Query: 325 -EQVFV-RKVIEL------HDKYLAYVNDCFQNHTLFHKSLK-EAFEVFCNKGVAGSSSA 375
E+ +V RK ++ H+ + + N+ + N+ +H +L ++ + NK
Sbjct: 622 HEEEYVKRKHMDNNIHNNDHNDNIYFNNNLYFNND-YHNNLYYDSLNI--NKRSDEKIFF 678
Query: 376 ELLATFCDNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDK 435
LL D + KK + + I M+ ++ L Y+SDK+ F ++YR + +RL+ D
Sbjct: 679 HLLKI--DKLFKK---YHIIGKYIMNMITVILSLFRYVSDKEKFEKYYRTYMCKRLINDS 733
Query: 436 SANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNAN-PGIDL 494
S N + + LK++CG QFT K+E ++ D+ + F + L NN N
Sbjct: 734 SFNIILDVKVFKTLKKECGAQFTKKIEIILKDMKFTSKTLMKFYKELPNNVNHFLKRKKY 793
Query: 495 TVTVLTTGFWPSYKSFDLNL--PAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGK 552
V ++ W Y + + N+ P + C E F FYQ K + + ++ LG C L
Sbjct: 794 AVNIIFNESW-EYVNTENNVIYPPMIKMCNEAFFLFYQKYNKSKNIKFLPLLGLCTLRVH 852
Query: 553 FES 555
F++
Sbjct: 853 FKN 855
Score = 119 (46.9 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 58/252 (23%), Positives = 113/252 (44%)
Query: 144 DQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILE-- 201
+ E + Q + + VL + ++I ++ Y+ DFE +T +Y K + +
Sbjct: 303 NHEYKNTQKKKKINDKVLSLSIKIS-DILNLYD-DFERIYKNETYTFYKEKIEKYKKDME 360
Query: 202 ----DSCP-DYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHS 256
+ C D+ + E L E+ R +L +E +L ++ +LL V +L K+
Sbjct: 361 TLGYEECNFDFPIIVENYLCHEQIRSRKFLKEHTEITILNMLK-DLLLVKNRDVLFKDSY 419
Query: 257 GCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEGTALVKLAEDAASNKKAE 316
+ ++++ K + L ++ L+S L+ SNIF V GT LV + +N
Sbjct: 420 IKYCIIKE-KYDPLRSVY-LYSLNLDDLENFSNIFFNVVDNIGTELVNDVINKRNNSSLL 477
Query: 317 KRDVVGLQE-QVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSA 375
++ L ++ V ++I + +Y +Y F K +E FE F NKG+ +
Sbjct: 478 NNAIIKLINFKLNVDRIIIMSFRYSSY----------FMKKWREVFEHFINKGIQAETYM 527
Query: 376 EL-LATFCDNIL 386
+ L+ + +N+L
Sbjct: 528 PIILSMYLNNLL 539
Score = 84 (34.6 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 41/178 (23%), Positives = 74/178 (41%)
Query: 543 SLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSL 602
S T N GK + + VT QA LLLFN + +EI +S ++++R L ++
Sbjct: 950 SSSTYNKKGK---KKIYITVTILQALVLLLFNKKNEYHINEIKELTGISTENIIRYLKTI 1006
Query: 603 -SCAKYKILNKEPNTKTISPTDHFEFNSKF-----TDKMRRIKIPLPPXXXXXXXXXXXX 656
+ + IL + + + F KF D + K + P
Sbjct: 1007 YTIGETHILIYDKANEILKLNFSFRSKKKFLIVNYNDVL--YKDDMGPTTSLLNEDNEIE 1064
Query: 657 XXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYL 714
+ IDA+IV+ +K+ +++ C +M + IK RI L++R+++
Sbjct: 1065 DKTLH-IDAAIVKFLKTNGKSSERKI---CSFIKDKMDISSNEQIKNRISSLLSREFI 1118
>UNIPROTKB|A6NE76 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002476
EMBL:AL451005 HGNC:HGNC:2555 IPI:IPI00644450
ProteinModelPortal:A6NE76 SMR:A6NE76 STRING:A6NE76 PRIDE:A6NE76
Ensembl:ENST00000371323 HOGENOM:HOG000006909 HOVERGEN:HBG084579
ArrayExpress:A6NE76 Bgee:A6NE76 Uniprot:A6NE76
Length = 234
Score = 190 (71.9 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 42/148 (28%), Positives = 82/148 (55%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE--LNGK 134
L+++ + W NH + + F +LDR ++ + S LP + ++GL FR + ++ + K
Sbjct: 90 LKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNK 149
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI++ER GE IDR+LL+++L + + + Y++ FE L++T Y+ +
Sbjct: 150 TIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIYQDSFEQRFLEETNRLYAAE 204
Query: 195 ASNWILEDSCPDYMLKAEECLKREKDRV 222
+ E P+Y+ + L+ E DR+
Sbjct: 205 GQKLMQEREVPEYLHHVNKRLEEEADRL 232
>UNIPROTKB|F1PYP1 [details] [associations]
symbol:TMEM210 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069 SMART:SM00182
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 OMA:MLRGVLF
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00390000008939 EMBL:AAEX03006734
Ensembl:ENSCAFT00000030976 Uniprot:F1PYP1
Length = 885
Score = 180 (68.4 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 57/212 (26%), Positives = 94/212 (44%)
Query: 406 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM 464
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 497 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 556
Query: 465 VTDLTLARENQTSFEEYLSNNP-NANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVE 523
+ D+ +R + E P P + +L++ FWP +K L +P ++ + +E
Sbjct: 557 LKDMADSRRINANIREEDEKRPAEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIREALE 616
Query: 524 VFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSE 583
V+ + Y+ R L+W ++LG + + RT + VT QA LL F + E
Sbjct: 617 VYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQDQATWTLEE 676
Query: 584 IMTQLNLSDDDVVRLLHSLSC-AKYKILNKEP 614
+ + + V L +S + +L +EP
Sbjct: 677 LSKVVKMP---VALLRRRMSVWLQQGVLREEP 705
>UNIPROTKB|F1NLT0 [details] [associations]
symbol:ANAPC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0070979 "protein K11-linked
ubiquitination" evidence=IEA] [GO:0090129 "positive regulation of
synapse maturation" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069 SMART:SM00182
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0005680
OMA:MLRGVLF GO:GO:0031915 GO:GO:0070979 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 EMBL:AADN02026919 IPI:IPI00604035
Ensembl:ENSGALT00000014053 Uniprot:F1NLT0
Length = 820
Score = 179 (68.1 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 56/216 (25%), Positives = 95/216 (43%)
Query: 406 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM 464
++ LL I KDLF YR LA RLL + + + E + LK + G E M
Sbjct: 499 IISLLVSIYGSKDLFINEYRTLLADRLLHQFNYSAEREIRNVELLKLRFGEAQMHYCEVM 558
Query: 465 VTDLTLARENQTSFEEYLSNNPNAN-PGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVE 523
+ D+ +R + + P P L +L++ FWP K L LP ++ + +E
Sbjct: 559 LKDMADSRRINANIRDEEEKLPEEERPPFSLVAVILSSEFWPPLKEEKLELPEQVKEAME 618
Query: 524 VFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSE 583
+ + Y+ R L W Y LG +L + RT L V+ A+ +L F + + +E
Sbjct: 619 AYSKKYEKLKAMRTLNWKYHLGLVSLDVELADRTLSLSVSPVHAAIILHFQTKSTWTLAE 678
Query: 584 IMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTI 619
+ L + + R + +L + + + P T T+
Sbjct: 679 LSEVLKVPVTSLKRKM-TLWLQQGVLREEPPGTFTV 713
>ASPGD|ASPL0000051025 [details] [associations]
symbol:AN10258 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0005680 "anaphase-promoting
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 EMBL:BN001307 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 GO:GO:0031461
EnsemblFungi:CADANIAT00008784 OMA:TWQATVI Uniprot:C8VLZ0
Length = 918
Score = 180 (68.4 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 57/215 (26%), Positives = 101/215 (46%)
Query: 409 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 468
L++ K+ F R LA RLL K A + E S+L LK + G E M+ D+
Sbjct: 579 LISIFDSKETFVRELRDMLADRLL-QKRAEFEQEMSVLELLKLRFGDNALQACEVMLRDI 637
Query: 469 TLARENQTSF--EEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFR 526
+R T ++ ++N+ + +L +L+ FWP K +P+E+ + + +
Sbjct: 638 FDSRRVDTVVRNDQGMTNSQDQETP-ELHAKILSHFFWPELKGHQFKVPSEITELQQRYA 696
Query: 527 EFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNS--SDRLSYSEI 584
E +++ + RKLTW+ G + E R V+T+QA+ + FNS ++ S S+
Sbjct: 697 EGFESLKQSRKLTWLNGFGQVTVELDLEDRVFVEEVSTWQATVIYAFNSGTAESESVSKT 756
Query: 585 MTQLNLSDDDVVRLLHS--LSCAKYKILNKEPNTK 617
+ +L+ D L+ S L +IL + P +
Sbjct: 757 IPELSAQLDMSAALVRSACLFWVSRRILTEVPGQR 791
Score = 48 (22.0 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 24/87 (27%), Positives = 40/87 (45%)
Query: 30 EGLPEPQFSSEDYMMLYTYLFQPHLVSAF-VNILLLVLPSIREKHDEFMLRELVKRWSNH 88
+GL +F + + + T + L+ F V LLL+ ++ML L +R +
Sbjct: 153 DGLLREKFP-DVFQSISTSFDRNSLLEGFLVRCLLLMRRIYFTPLVQYMLPVLERR-AQE 210
Query: 89 KVMVRWLSRFFHYLDRYFIARRSLPPL 115
K +++ R FH + RY I SL L
Sbjct: 211 KCFMKF-ERSFHLMIRYAIPGPSLSDL 236
>RGD|1305546 [details] [associations]
symbol:Anapc2 "anaphase promoting complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005680
"anaphase-promoting complex" evidence=ISO] [GO:0031915 "positive
regulation of synaptic plasticity" evidence=ISO] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0050775
"positive regulation of dendrite morphogenesis" evidence=IMP]
[GO:0070979 "protein K11-linked ubiquitination" evidence=ISO]
[GO:0090129 "positive regulation of synapse maturation"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 RGD:1305546 GO:GO:0005634
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050775 GO:GO:0045773
GO:GO:0006511 GO:GO:0005680 HOVERGEN:HBG045327 GO:GO:0090129
GO:GO:0031915 GO:GO:0070979 InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 EMBL:BC107471 IPI:IPI00373399
UniGene:Rn.20099 STRING:Q3B7T7 PhosphoSite:Q3B7T7 UCSC:RGD:1305546
InParanoid:Q3B7T7 ArrayExpress:Q3B7T7 Genevestigator:Q3B7T7
Uniprot:Q3B7T7
Length = 539
Score = 175 (66.7 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 56/212 (26%), Positives = 93/212 (43%)
Query: 406 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM 464
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 218 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 277
Query: 465 VTDLTLARENQTSFEEYLSNNP-NANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVE 523
+ D+ +R + E P P + +L++ FWP +K L +P ++ ++
Sbjct: 278 LKDMADSRRINANIREEDEKRPVEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIRAALD 337
Query: 524 VFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSE 583
V+ + Y+ R L+W ++LG + + RT + VT QA LL F + E
Sbjct: 338 VYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQDQASWTLEE 397
Query: 584 IMTQLNLSDDDVVRLLHSLSC-AKYKILNKEP 614
+ + + V L +S + +L +EP
Sbjct: 398 LSKVVKMP---VALLRRRMSVWLQQGVLREEP 426
>UNIPROTKB|Q9UJX6 [details] [associations]
symbol:ANAPC2 "Anaphase-promoting complex subunit 2"
species:9606 "Homo sapiens" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0070979 "protein K11-linked ubiquitination"
evidence=IDA] [GO:0005680 "anaphase-promoting complex"
evidence=IDA] [GO:0090129 "positive regulation of synapse
maturation" evidence=ISS] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=TAS] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_6850 InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0000079 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007067 GO:GO:0007094
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050775 GO:GO:0051436
GO:GO:0045773 GO:GO:0004842 GO:GO:0005680 EMBL:AF191337
EMBL:AL929554 EMBL:BC032503 EMBL:BC001579 EMBL:BC009487
EMBL:AB037827 IPI:IPI00002549 IPI:IPI00375832 RefSeq:NP_037498.1
UniGene:Hs.533262 ProteinModelPortal:Q9UJX6 SMR:Q9UJX6
DIP:DIP-32957N IntAct:Q9UJX6 MINT:MINT-1196367 STRING:Q9UJX6
PhosphoSite:Q9UJX6 DMDM:37537863 PaxDb:Q9UJX6 PRIDE:Q9UJX6
DNASU:29882 Ensembl:ENST00000323927 GeneID:29882 KEGG:hsa:29882
UCSC:uc004clq.1 UCSC:uc004clr.1 CTD:29882 GeneCards:GC09M140069
HGNC:HGNC:19989 HPA:CAB018692 MIM:606946 neXtProt:NX_Q9UJX6
PharmGKB:PA134884359 eggNOG:COG5647 HOGENOM:HOG000033936
HOVERGEN:HBG045327 InParanoid:Q9UJX6 KO:K03349 OMA:MLRGVLF
OrthoDB:EOG4T1HM4 PhylomeDB:Q9UJX6 Reactome:REACT_8017
GenomeRNAi:29882 NextBio:52411 ArrayExpress:Q9UJX6 Bgee:Q9UJX6
CleanEx:HS_ANAPC2 CleanEx:HS_APC2 Genevestigator:Q9UJX6
GermOnline:ENSG00000176248 GO:GO:0031145 GO:GO:0008054
GO:GO:0090129 GO:GO:0031915 GO:GO:0051437 GO:GO:0070979
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
Uniprot:Q9UJX6
Length = 822
Score = 174 (66.3 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 56/212 (26%), Positives = 92/212 (43%)
Query: 406 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM 464
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 501 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 560
Query: 465 VTDLTLARENQTSFEEYLSNNP-NANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVE 523
+ D+ +R + E P P + +L++ FWP +K L +P ++ +E
Sbjct: 561 LKDMADSRRINANIREEDEKRPAEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIRAALE 620
Query: 524 VFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSE 583
+ + Y+ R L+W ++LG + + RT + VT QA LL F + E
Sbjct: 621 AYCKKYEQLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVILLYFQDQASWTLEE 680
Query: 584 IMTQLNLSDDDVVRLLHSLSC-AKYKILNKEP 614
+ + + V L +S + +L +EP
Sbjct: 681 LSKAVKMP---VALLRRRMSVWLQQGVLREEP 709
>ZFIN|ZDB-GENE-081104-256 [details] [associations]
symbol:anapc2 "anaphase promoting complex subunit
2" species:7955 "Danio rerio" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 ZFIN:ZDB-GENE-081104-256
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 CTD:29882
eggNOG:COG5647 HOGENOM:HOG000033936 HOVERGEN:HBG045327 KO:K03349
OrthoDB:EOG4T1HM4 InterPro:IPR014786 Pfam:PF08672 SMART:SM01013
SUPFAM:SSF75632 GeneTree:ENSGT00390000016127 GO:GO:0031461
EMBL:CU468929 IPI:IPI00920305 RefSeq:NP_001243675.1
UniGene:Dr.105374 Ensembl:ENSDART00000133722 GeneID:100318335
KEGG:dre:100318335 Uniprot:B8JLK0
Length = 802
Score = 168 (64.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 57/219 (26%), Positives = 95/219 (43%)
Query: 383 DNILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHE 442
D + K GS++ S + I L++ K++F Y+ LA RLL + N E
Sbjct: 463 DALTDKTGSKRRSSDIIS-------LLVSIYGSKEIFVNEYKTVLADRLLHQLNYNTARE 515
Query: 443 RSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNP-NANPGIDLTVTVLTT 501
+ LK + G E M+ D+ +R ++ E P P + L+ ++++
Sbjct: 516 IRNVELLKLRFGESHMHYCEVMLKDVADSRRINSNIHEEERRLPAEEQPTLPLSAMIISS 575
Query: 502 GFWPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRT-TEL 560
FWP K + LPA K +E + ++ R L W LG+ L + E RT T+L
Sbjct: 576 EFWPQLKEEKMELPAVASKAMEDYTHRFEKLKAMRTLRWKPQLGSVTLDLELEDRTITDL 635
Query: 561 IVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLL 599
V+ A+ +L F + E+ L + + V R L
Sbjct: 636 TVSPIHAAIILHFQDKGTWTLEELSGVLGVPQEMVRRKL 674
Score = 47 (21.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 212 EECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEK 253
+E L++ ++ +SH L S +LLE+V E ++ +QL+E+
Sbjct: 203 QEALQQLQE-LSHIL---SRLQLLERVSSEAVTSILHQLIEQ 240
>MGI|MGI:2139135 [details] [associations]
symbol:Anapc2 "anaphase promoting complex subunit 2"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0005680 "anaphase-promoting complex" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0045773 "positive regulation of axon extension"
evidence=ISO] [GO:0050775 "positive regulation of dendrite
morphogenesis" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0070979 "protein K11-linked ubiquitination"
evidence=ISO] [GO:0090129 "positive regulation of synapse
maturation" evidence=IDA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 UniPathway:UPA00143
MGI:MGI:2139135 GO:GO:0051301 GO:GO:0007067 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050775 GO:GO:0045773 GO:GO:0006511
GO:GO:0005680 CTD:29882 eggNOG:COG5647 HOVERGEN:HBG045327 KO:K03349
OMA:MLRGVLF OrthoDB:EOG4T1HM4 GO:GO:0090129 GO:GO:0031915
GO:GO:0070979 InterPro:IPR014786 Pfam:PF08672 SMART:SM01013
SUPFAM:SSF75632 EMBL:AK033784 EMBL:AK170676 EMBL:AL732309
EMBL:BC027351 EMBL:BC137583 IPI:IPI00227654 RefSeq:NP_780509.2
UniGene:Mm.291624 ProteinModelPortal:Q8BZQ7 SMR:Q8BZQ7
STRING:Q8BZQ7 PhosphoSite:Q8BZQ7 PaxDb:Q8BZQ7 PRIDE:Q8BZQ7
Ensembl:ENSMUST00000028341 GeneID:99152 KEGG:mmu:99152
GeneTree:ENSGT00390000016127 InParanoid:Q3TCK5 NextBio:353811
Bgee:Q8BZQ7 CleanEx:MM_ANAPC2 Genevestigator:Q8BZQ7
GermOnline:ENSMUSG00000026965 Uniprot:Q8BZQ7
Length = 837
Score = 176 (67.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 56/212 (26%), Positives = 94/212 (44%)
Query: 406 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM 464
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 516 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 575
Query: 465 VTDLTLARENQTSFEEYLSNNP-NANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVE 523
+ D+ +R + E P P + +L++ FWP +K L +P ++ ++
Sbjct: 576 LKDMADSRRINANIREEDEKRPVEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIRAALD 635
Query: 524 VFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSE 583
V+ + Y+ R L+W ++LG + + RT + VT QA LL F + + E
Sbjct: 636 VYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQNQASWTLEE 695
Query: 584 IMTQLNLSDDDVVRLLHSLSC-AKYKILNKEP 614
+ + + V L +S + +L +EP
Sbjct: 696 LSKVVKMP---VALLRRRMSVWLQQGVLREEP 724
Score = 38 (18.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 224 HYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVED---LSRMFRLFSKI 280
H LHS E +E +Q++L A + LR++ V++ L + F +
Sbjct: 80 HGLHSVLEEWFVEVLQNDLQGNIATEFWNA------IALRENSVDEPQCLGLLLDAFGLL 133
Query: 281 PRGLDP 286
LDP
Sbjct: 134 ESRLDP 139
>RGD|1563853 [details] [associations]
symbol:Cul4a "cullin 4A" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0051246 "regulation of
protein metabolic process" evidence=ISO] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISO] InterPro:IPR001373
Pfam:PF00888 RGD:1563853 GO:GO:0006511 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 IPI:IPI00952377
Ensembl:ENSRNOT00000066778 UCSC:RGD:1563853 ArrayExpress:D3ZL69
Uniprot:D3ZL69
Length = 255
Score = 151 (58.2 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 34/128 (26%), Positives = 72/128 (56%)
Query: 78 LRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRS-LPPLNEVGLTCFRDLVYTE--LNGK 134
L+++ W +H + + F +LDR ++ + S LP + ++GL FR+ + ++ + K
Sbjct: 132 LQKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDRMVQSK 191
Query: 135 VRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRK 194
D ++ LI +ER GE +DR+LL+++L + + + Y++ FE L++T Y+ +
Sbjct: 192 TIDGILLLIGRERSGEAVDRSLLRSLLSM-----LSDLQVYKDSFELKFLEETNCLYAAE 246
Query: 195 ASNWILED 202
+++D
Sbjct: 247 GQR-LMQD 253
>TAIR|locus:2118111 [details] [associations]
symbol:AT4G12100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006511 GO:GO:0031461
EMBL:AL049638 EMBL:AL161533 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 EMBL:AY133688 IPI:IPI00544547 PIR:T06617
RefSeq:NP_192947.1 UniGene:At.33506 ProteinModelPortal:Q9SZ75
SMR:Q9SZ75 PaxDb:Q9SZ75 PRIDE:Q9SZ75 EnsemblPlants:AT4G12100.1
GeneID:826818 KEGG:ath:AT4G12100 TAIR:At4g12100 eggNOG:NOG327349
HOGENOM:HOG000153571 OMA:HECEPHI PhylomeDB:Q9SZ75
ProtClustDB:CLSN2915908 Genevestigator:Q9SZ75 Uniprot:Q9SZ75
Length = 434
Score = 152 (58.6 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 48/175 (27%), Positives = 88/175 (50%)
Query: 130 ELNGKVRDAVITLIDQEREGEQIDRA--LLKNVLDIFVEIGMGQMDY-YENDFETAMLKD 186
+L +V ++ LI ER G+ + LLKN++D+F Q Y Y++ F L
Sbjct: 208 QLQDQVITGILRLITDERLGKAANNTSDLLKNLMDMFRM--QWQCTYVYKDPF----LDS 261
Query: 187 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVS-HYLH-SSSEPKLLEKVQHELLS 244
T+ +Y+ +A + Y+ E E+++ HY SSS +L++ ++ +LL
Sbjct: 262 TSKFYAEEAEQVLQRSDISHYLKYVERTFLAEEEKCDKHYFFFSSSRSRLMKVLKSQLLE 321
Query: 245 VYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSNIFKQHVTAEG 299
+++ L E G L+ + ++DL RM+RLFS + D + I + ++ A+G
Sbjct: 322 AHSSFLEE----GFMLLMDESLIDDLRRMYRLFSMVDSE-DYIDRILRAYILAKG 371
Score = 49 (22.3 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 334 ELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAEL 377
ELH + CF L K++++ FE F V G S +L
Sbjct: 382 ELHTSIDKIWHQCFGQDDLLDKTIRDCFEGF-GLHVPGEFSDQL 424
>TAIR|locus:2049173 [details] [associations]
symbol:APC2 "AT2G04660" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0009561 "megagametogenesis" evidence=IMP]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0007276 "gamete
generation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0032875 "regulation
of DNA endoreduplication" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0051301 GO:GO:0007067 GO:GO:0005819
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0009561 eggNOG:COG5647 KO:K03349 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632 EMBL:AC006955
EMBL:AK118453 EMBL:AY138228 IPI:IPI00520644 PIR:H84459
RefSeq:NP_178543.2 UniGene:At.41283 ProteinModelPortal:Q8H1U5
SMR:Q8H1U5 IntAct:Q8H1U5 STRING:Q8H1U5 PaxDb:Q8H1U5 PRIDE:Q8H1U5
EnsemblPlants:AT2G04660.1 GeneID:815008 KEGG:ath:AT2G04660
TAIR:At2g04660 HOGENOM:HOG000265303 InParanoid:Q8H1U5 OMA:RIHNTLK
PhylomeDB:Q8H1U5 ProtClustDB:CLSN2690638 Genevestigator:Q8H1U5
GO:GO:0031461 Uniprot:Q8H1U5
Length = 865
Score = 164 (62.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 51/194 (26%), Positives = 86/194 (44%)
Query: 409 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 468
L+ I K+ YR LA +LL + D E + LK G + E M+ DL
Sbjct: 543 LVDIIGSKEQLVNEYRVMLAEKLLNKTDYDIDTEIRTVELLKIHFGEASMQRCEIMLNDL 602
Query: 469 TLARENQTSFEEYLSNNPNANPG---ID-LTVTVLTTGFWPSYKSFDLNLPAEMVKCVEV 524
++ T+ ++ +D LT T+L+T FWP + L LP + K +
Sbjct: 603 IDSKRVNTNIKKASQTGAELRENELSVDTLTSTILSTNFWPPIQDEPLELPGPVDKLLSD 662
Query: 525 F-REFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSE 583
+ +++ KT RKL W +LGT L +FE R + V+ A+ ++ F +Y +
Sbjct: 663 YANRYHEIKTP-RKLLWKKNLGTVKLELQFEDRAMQFTVSPTHAAIIMQFQEKKSWTYKD 721
Query: 584 IMTQLNLSDDDVVR 597
+ + + D + R
Sbjct: 722 LAEVIGIPIDALNR 735
Score = 41 (19.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 233 KLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLS 271
K + KV +L S+ + E ++ LL KV DL+
Sbjct: 241 KNIGKVVRDLRSIGFTSMAENAYASAIFLLLKAKVHDLA 279
Score = 40 (19.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 392 EKLSDEAIEEMLE 404
E LSD+AI+E+ E
Sbjct: 15 ETLSDDAIQEITE 27
>FB|FBgn0002791 [details] [associations]
symbol:mr "morula" species:7227 "Drosophila melanogaster"
[GO:0000090 "mitotic anaphase" evidence=NAS] [GO:0005680
"anaphase-promoting complex" evidence=NAS;TAS;IPI] [GO:0051726
"regulation of cell cycle" evidence=TAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0045886 "negative
regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0050804 "regulation of synaptic transmission"
evidence=IMP] [GO:0090302 "mitotic anaphase-promoting complex
activity" evidence=ISS] [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 EMBL:AE013599 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0045886 GO:GO:0006511
GO:GO:0005680 KO:K03349 OMA:MLRGVLF InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 GeneTree:ENSGT00390000016127
GO:GO:0050804 FlyBase:FBgn0002791 EMBL:AY129297 EMBL:BT031326
RefSeq:NP_611862.1 UniGene:Dm.759 SMR:Q9W1E5 IntAct:Q9W1E5
MINT:MINT-292405 STRING:Q9W1E5 EnsemblMetazoa:FBtr0072156
GeneID:45906 KEGG:dme:Dmel_CG3060 UCSC:CG3060-RA InParanoid:Q9W1E5
GenomeRNAi:45906 NextBio:838467 Uniprot:Q9W1E5
Length = 802
Score = 148 (57.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 50/201 (24%), Positives = 87/201 (43%)
Query: 384 NILKKGGSEKLSDEAIEEMLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHER 443
+I++ S K+ I M VV + Y S K+LF YR +A RLL N + E
Sbjct: 471 SIMQYNSSRKMRSADIISM---VVDI--YGS-KELFMTEYRNLMADRLLAQLDFNSEKEI 524
Query: 444 SILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGF 503
L LK + G E M+ D+T ++ + N D++ +++ F
Sbjct: 525 RNLELLKIRFGESLLHSCEVMLKDVTDSKRINAHIHS--DGDRTENQLFDISSLIVSAQF 582
Query: 504 WPSYKSFDLNLPAEMVKCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVT 563
WPS+ L LP E+ + + + Y+ +R L W G N+ + RT E++V+
Sbjct: 583 WPSFNKESLQLPEEIENEFKKYTKAYEAYKGNRTLNWRTVTGRVNIEIEIGDRTMEMVVS 642
Query: 564 TYQASALLLFNSSDRLSYSEI 584
A + F + + + ++
Sbjct: 643 PILAVIIYHFQTKNEWTIEDL 663
>DICTYBASE|DDB_G0276377 [details] [associations]
symbol:anapc2 "anaphase promoting complex subunit 2"
species:44689 "Dictyostelium discoideum" [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0016567 "protein ubiquitination" evidence=IEA;IC] [GO:0005829
"cytosol" evidence=ISS] [GO:0005680 "anaphase-promoting complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
UniPathway:UPA00143 dictyBase:DDB_G0276377 GO:GO:0005829
GO:GO:0051301 GO:GO:0007067 EMBL:AAFI02000014
GenomeReviews:CM000151_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0005680 KO:K03349 GO:GO:0031145
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
eggNOG:NOG306201 RefSeq:XP_643183.1 ProteinModelPortal:Q551S9
STRING:Q551S9 EnsemblProtists:DDB0234264 GeneID:8620454
KEGG:ddi:DDB_G0276377 OMA:NFIVISE ProtClustDB:CLSZ2729163
Uniprot:Q551S9
Length = 907
Score = 147 (56.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 64/249 (25%), Positives = 106/249 (42%)
Query: 390 GSEKLSDEAIEEMLEKVVKLLAYISDK-DLFAEFYRKKLARRLLFDKSANDDHERSILTK 448
G+ K ++ ++ + + L I D DLF YR L+ RLL + D E +
Sbjct: 545 GNAKANNNNKKKKKKDTISHLVNIYDGIDLFINEYRSMLSDRLLSVVDFDLDKEIKNIEL 604
Query: 449 LKQQCGGQFTSKMEGMVTD------LTLARENQTSFEEYLSNNPNANPGI-DLTVTVLTT 501
LK + G E M+ D L L +N +NN N N + + +L+
Sbjct: 605 LKLRFGDSVLFNCEIMIKDMVDSKRLNLQIKNSQGVNNNNNNNNNNNNELKEFETLILSQ 664
Query: 502 GFWPSYKSFDLNLPAEMVKCVEVF-REFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTEL 560
FWP+ K + P + K ++++ +E+ + KT R+L W LG +L + +
Sbjct: 665 LFWPTLKGDEFKYPKSIEKKMQIYSKEYERIKTP-RQLIWKQHLGLVDLDLEIGNNIQSF 723
Query: 561 IVTTYQASALLLFNSSD-------RLSYSEIMTQLNLSDDDVVR---------LLHSLSC 604
V+ A+ ++LF S D L+ + QL +S D V + ++ S
Sbjct: 724 QVSPIHATLIMLFESDDGDDDDEKELTLEYLSKQLEISKDLVKKKLIFWLNNQIIKETSH 783
Query: 605 AKYKILNKE 613
YKI NKE
Sbjct: 784 ETYKINNKE 792
>WB|WBGene00000143 [details] [associations]
symbol:apc-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 GO:GO:0009792 GO:GO:0007126 GO:GO:0006898
GO:GO:0051301 GO:GO:0007067 GO:GO:0040035 GO:GO:0040039
GO:GO:0006511 KO:K03349 InterPro:IPR014786 SMART:SM01013
SUPFAM:SSF75632 GeneTree:ENSGT00390000016127 GO:GO:0031461
EMBL:FO080533 PIR:S44845 PIR:S44846 RefSeq:NP_498762.2
ProteinModelPortal:P34514 SMR:P34514 IntAct:P34514
MINT:MINT-1054240 STRING:P34514 PaxDb:P34514 EnsemblMetazoa:K06H7.6
GeneID:176139 KEGG:cel:CELE_K06H7.6 UCSC:K06H7.6 CTD:176139
WormBase:K06H7.6 eggNOG:NOG306201 HOGENOM:HOG000022396
InParanoid:P34514 OMA:HEINAEL NextBio:891294 Uniprot:P34514
Length = 731
Score = 145 (56.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 41/188 (21%), Positives = 87/188 (46%)
Query: 409 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 468
L++ K+LF + YR LA RL + + + E+ L LK + E M+ D+
Sbjct: 405 LVSVYGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCEVMLRDV 464
Query: 469 TLARENQTSFEEYLSNNPNAN---PGIDLTVTVLTTGFWPSYKS--FDLNLPAEMVKCVE 523
+ + FE+ +S N P I ++ ++++ +WP ++ + +P + ++
Sbjct: 465 IHSLDIDKKFED-MSERSAGNYDVPIIPISACIISSHYWPKLETEKTEALMPQPLQAAMD 523
Query: 524 VFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSE 583
V++E Y + RKL W+ S+G + + + + A L LF + + +E
Sbjct: 524 VYQETYLDVKRDRKLEWLRSVGCVEVSINIDGVEVDRTIPNMYALLLFLFLEKETWTTAE 583
Query: 584 IMTQLNLS 591
++ ++ +S
Sbjct: 584 VVEKMGMS 591
>UNIPROTKB|P34514 [details] [associations]
symbol:apc-2 "Anaphase-promoting complex subunit 2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 GO:GO:0009792
GO:GO:0007126 GO:GO:0006898 GO:GO:0051301 GO:GO:0007067
GO:GO:0040035 GO:GO:0040039 GO:GO:0006511 KO:K03349
InterPro:IPR014786 SMART:SM01013 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 GO:GO:0031461 EMBL:FO080533 PIR:S44845
PIR:S44846 RefSeq:NP_498762.2 ProteinModelPortal:P34514 SMR:P34514
IntAct:P34514 MINT:MINT-1054240 STRING:P34514 PaxDb:P34514
EnsemblMetazoa:K06H7.6 GeneID:176139 KEGG:cel:CELE_K06H7.6
UCSC:K06H7.6 CTD:176139 WormBase:K06H7.6 eggNOG:NOG306201
HOGENOM:HOG000022396 InParanoid:P34514 OMA:HEINAEL NextBio:891294
Uniprot:P34514
Length = 731
Score = 145 (56.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 41/188 (21%), Positives = 87/188 (46%)
Query: 409 LLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 468
L++ K+LF + YR LA RL + + + E+ L LK + E M+ D+
Sbjct: 405 LVSVYGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCEVMLRDV 464
Query: 469 TLARENQTSFEEYLSNNPNAN---PGIDLTVTVLTTGFWPSYKS--FDLNLPAEMVKCVE 523
+ + FE+ +S N P I ++ ++++ +WP ++ + +P + ++
Sbjct: 465 IHSLDIDKKFED-MSERSAGNYDVPIIPISACIISSHYWPKLETEKTEALMPQPLQAAMD 523
Query: 524 VFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSE 583
V++E Y + RKL W+ S+G + + + + A L LF + + +E
Sbjct: 524 VYQETYLDVKRDRKLEWLRSVGCVEVSINIDGVEVDRTIPNMYALLLFLFLEKETWTTAE 583
Query: 584 IMTQLNLS 591
++ ++ +S
Sbjct: 584 VVEKMGMS 591
>POMBASE|SPBP23A10.04 [details] [associations]
symbol:apc2 "anaphase-promoting complex cullin family
subunit Apc2" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005680 "anaphase-promoting complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0008054 "cyclin catabolic process"
evidence=IC] [GO:0016567 "protein ubiquitination" evidence=IC]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IC] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IC] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS01256 PROSITE:PS50069 PomBase:SPBP23A10.04 GO:GO:0005829
GO:GO:0051301 GO:GO:0007067 GO:GO:0030071 EMBL:CU329671
Gene3D:1.10.10.10 InterPro:IPR011991 GenomeReviews:CU329671_GR
GO:GO:0016567 GO:GO:0005680 KO:K03349 GO:GO:0031145 GO:GO:0008054
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
eggNOG:NOG306201 RefSeq:NP_001018806.1 ProteinModelPortal:Q874R3
IntAct:Q874R3 STRING:Q874R3 EnsemblFungi:SPBP23A10.04.1
GeneID:3361204 KEGG:spo:SPBP23A10.04 OMA:SHWANFR OrthoDB:EOG4XPTQ5
NextBio:20811314 Uniprot:Q874R3
Length = 681
Score = 136 (52.9 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 56/232 (24%), Positives = 99/232 (42%)
Query: 406 VVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMV 465
V L++ K+ + + LA RLL + + E + LK + G M+
Sbjct: 376 VGSLISIFKSKEPLVKELQLLLADRLLQLTDYHYEVEAKNIEFLKYRFGETVLQMCSVML 435
Query: 466 TDLTLAR--ENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVE 523
D+ +R + E Y+S L VT+L+ FWP+ +LP + K ++
Sbjct: 436 NDIENSRFIDQSIHMENYVSKG--------LHVTILSRLFWPTLSVRYFHLPGPLKKELD 487
Query: 524 VFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSE 583
+ E Y+ + + R+L ++ +LG+ L + E RT L VT QA+ + LF + L +
Sbjct: 488 AYAEEYRERKRKRELVFLPNLGSVELEIELEDRTLTLTVTPEQAAFISLFEETSTLHIEK 547
Query: 584 IMTQLNLSDDDVVR----LLH-----SLSCAKYKILNKEPNTKTISPTDHFE 626
L+ + V R LH + +Y++ E T T + D +
Sbjct: 548 AAELLDQPKEIVERHLKFWLHHRVLTDIGDDRYRVRETEAETATETVLDEIQ 599
Score = 55 (24.4 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 113 PPLNEVGLTCFRDLVYTELNGKVRDAVIT-LIDQ-------EREGEQIDRALLKNVLDIF 164
P L+ + LTCFR L L V ++V+T +DQ + +D + + F
Sbjct: 84 PELDRI-LTCFRCLCRRYLPISVIESVLTEYLDQVLKVWLESKTNPCLDMEKFFQLCEKF 142
Query: 165 VEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSH 224
++G+ + E L + +R A +W E S Y +A E ++ E +
Sbjct: 143 KQLGLSSV-LKERFVYVLQLHVGSLLTTRYAMSW--EQSV--YH-EALEWIRTEFGVLVE 196
Query: 225 YLHSSSEPKLLEKVQHELLSVYAN 248
++ S S P +L ++ H + + A+
Sbjct: 197 HVFSLSNPAVLVQLDHLVSQILAH 220
Score = 41 (19.5 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 308 DAASN-KKAEKRDVVGLQEQVFVRK 331
DAA + KK RDVVG +F K
Sbjct: 362 DAAPDFKKPTDRDVVGSLISIFKSK 386
>UNIPROTKB|H7C399 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
EMBL:AC073052 EMBL:AC092679 HGNC:HGNC:2553 ChiTaRS:CUL3
ProteinModelPortal:H7C399 SMR:H7C399 Ensembl:ENST00000451538
Uniprot:H7C399
Length = 111
Score = 87 (35.7 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 659 RRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDK 718
R++ + S ++ ++ E +QL F P IKKRIE LI R+YL R
Sbjct: 42 RKHILQVSTFQMTILMLFNNREKYTFEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTP 101
Query: 719 SNPNMFRYLA 728
+ ++ Y+A
Sbjct: 102 EDRKVYTYVA 111
Score = 42 (19.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 374 SAELLATFCDNILKKGGSE 392
SA+L ATF + K+ GSE
Sbjct: 10 SADLNATFYGPVKKEDGSE 28
>UNIPROTKB|H0YCA0 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HGNC:HGNC:2556
EMBL:AP002433 EMBL:AP003307 Ensembl:ENST00000532782 Uniprot:H0YCA0
Length = 130
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 22/92 (23%), Positives = 48/92 (52%)
Query: 120 LTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---YYE 176
L + + +++ + +++D+ + L+ ER GE D L+ V + +V + D Y
Sbjct: 37 LDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYR 96
Query: 177 NDFETAMLKDTAAYYSRKASNWILEDSCPDYM 208
++FE A L T +Y +A +++ ++ +YM
Sbjct: 97 DNFEKAYLDSTERFYRTQAPSYLQQNGVQNYM 128
>CGD|CAL0005690 [details] [associations]
symbol:orf19.6821 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0010458 "exit from mitosis" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069
CGD:CAL0005690 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
KO:K03349 InterPro:IPR014786 Pfam:PF08672 SUPFAM:SSF75632
GO:GO:0031461 eggNOG:NOG306201 EMBL:AACQ01000029 EMBL:AACQ01000028
RefSeq:XP_719797.1 RefSeq:XP_719914.1 ProteinModelPortal:Q5ADM0
STRING:Q5ADM0 GeneID:3638545 GeneID:3638645 KEGG:cal:CaO19.14113
KEGG:cal:CaO19.6821 Uniprot:Q5ADM0
Length = 807
Score = 127 (49.8 bits), Expect = 0.00026, P = 0.00026
Identities = 50/195 (25%), Positives = 90/195 (46%)
Query: 406 VVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMV 465
+ L++ KD+F + + + L+ K N + S L LK + G Q + ++ M+
Sbjct: 479 IESLISIFDSKDIFIDEFTRLFGDSLIKLKDYNVEEIESNLNLLKSRFGKQNFATLDVMI 538
Query: 466 TDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYK---SFDLN---LPAEMV 519
D+ +E++ + ++ N N N +VL+ +W S + D N +P E+
Sbjct: 539 RDI---KESEYLNDLFVRNTRNTN----FNTSVLSHLYWSSILENINTDANNFKVPKEIE 591
Query: 520 KCVEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELI-VTTYQASALLLFNSS-D 577
+ F++ + + R L + SLG L +F+ + VT +AS + LFN D
Sbjct: 592 DKFQSFKDKFAQEKYGRTLELLPSLGLVTLQLEFKKSGPRVFKVTPDKASIISLFNEKED 651
Query: 578 RLSYSEIMTQLNLSD 592
LS S I LN+S+
Sbjct: 652 ELSVSYIAQTLNMSE 666
>UNIPROTKB|G3N1P6 [details] [associations]
symbol:ANAPC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 GO:GO:0006511 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 GO:GO:0031461 EMBL:DAAA02032412
Ensembl:ENSBTAT00000064659 OMA:XVNTCDI Uniprot:G3N1P6
Length = 627
Score = 124 (48.7 bits), Expect = 0.00040, P = 0.00040
Identities = 36/127 (28%), Positives = 58/127 (45%)
Query: 406 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM 464
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 498 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 557
Query: 465 VTDLTLARENQTSFEEYLSNNP-NANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVE 523
+ D+ +R + E P P + +L++ FWP +K L +P ++ + +E
Sbjct: 558 LKDMADSRRINANIREEDEKRPAEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIREALE 617
Query: 524 VFREFYQ 530
V+ Y+
Sbjct: 618 VYCRKYE 624
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 728 714 0.00084 121 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 127
No. of states in DFA: 618 (66 KB)
Total size of DFA: 368 KB (2183 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.51u 0.61s 61.12t Elapsed: 00:00:03
Total cpu time: 60.56u 0.62s 61.18t Elapsed: 00:00:03
Start: Fri May 10 05:44:36 2013 End: Fri May 10 05:44:39 2013
WARNINGS ISSUED: 1