BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004842
(728 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Query: 605 SIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-G 663
+ + ++ F+ E+ +A++NF++ +G+GG+GKVYKG L DGT+VAVKR +E Q G
Sbjct: 19 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGG 78
Query: 664 EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
E +F TE++ +S HRNL+ L G+C E++LVY +M+NG++
Sbjct: 79 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 122
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Query: 605 SIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-G 663
+ + ++ F+ E+ +A++NF + +G+GG+GKVYKG L DG +VAVKR +E Q G
Sbjct: 11 EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG 70
Query: 664 EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
E +F TE++ +S HRNL+ L G+C E++LVY +M+NG++
Sbjct: 71 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN 681
ATNNF+ IG G +GKVYKG+L DG VA+KR S QG +EF TEI+ LS H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
LVSL+G+CDE E +L+Y++M NG L+ L G
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN 681
ATNNF+ IG G +GKVYKG+L DG VA+KR S QG +EF TEI+ LS H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
LVSL+G+CDE E +L+Y++M NG L+ L G
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 120/294 (40%), Gaps = 44/294 (14%)
Query: 100 PEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRI 159
P + S L L +N +SG+IP +G++ P+EL Y+ L+ +
Sbjct: 409 PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 468
Query: 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYXX 219
+D N ++G +P +N ++NN ++G+IP + RL +L + L NN+ +G
Sbjct: 469 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Query: 220 XXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLK--------LSLRNCSLQGPMPDLS 271
+ N F GT A + K+ + ++N ++
Sbjct: 529 AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAG 588
Query: 272 RIPNLGYLDLSSNQLNGSIPPGRLS----LNITT-------------------IKLSNNK 308
+ L + + S QLN RLS NIT+ + +S N
Sbjct: 589 NL--LEFQGIRSEQLN------RLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNM 640
Query: 309 LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNL 362
L+G IP +P L L + +N +SGSIP + R LN ILD +N L
Sbjct: 641 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN-----ILDLSSNKL 689
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 51/199 (25%)
Query: 147 PEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVH 206
P L +L + + NY+SG++P S +L+K R + N + G+IP EL + +L
Sbjct: 408 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 467
Query: 207 MLLDNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP 266
++LD N+LTG IP+ SN +
Sbjct: 468 LILDFNDLTG-------------------------EIPSGLSNCT--------------- 487
Query: 267 MPDLSRIPNLGYLDLSSNQLNGSIPP--GRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQ 324
NL ++ LS+N+L G IP GRL N+ +KLSNN +G IP+ L
Sbjct: 488 --------NLNWISLSNNRLTGEIPKWIGRLE-NLAILKLSNNSFSGNIPAELGDCRSLI 538
Query: 325 RLFIANNSLSGSIPSSIWQ 343
L + N +G+IP+++++
Sbjct: 539 WLDLNTNLFNGTIPAAMFK 557
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 102/253 (40%), Gaps = 27/253 (10%)
Query: 110 ILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRIQIDQNYISGS 169
ILDF N ++G IP + N P+ +G L L +++ N SG+
Sbjct: 469 ILDF--NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Query: 170 LPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV---------HMLLDNNNLT----- 215
+P + +N N +G IP + + + ++ + N+ +
Sbjct: 527 IPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHG 586
Query: 216 --------GYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267
G + + G T P ++ N ++ L + L G +
Sbjct: 587 AGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP-TFDNNGSMMFLDMSYNMLSGYI 645
Query: 268 P-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQR 325
P ++ +P L L+L N ++GSIP L + + LS+NKL G IP S L L
Sbjct: 646 PKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTE 705
Query: 326 LFIANNSLSGSIP 338
+ ++NN+LSG IP
Sbjct: 706 IDLSNNNLSGPIP 718
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 99 SPEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDR 158
SP + LD +N +SG IPKEIG++ P+E+G L L+
Sbjct: 622 SPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 681
Query: 159 IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSL-VHMLLDNNNLTGY 217
+ + N + G +P++ + L ++NN++SG I PE+ + + L+N L GY
Sbjct: 682 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI-PEMGQFETFPPAKFLNNPGLCGY 740
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 95/248 (38%), Gaps = 32/248 (12%)
Query: 100 PEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRI 159
P +G S L LD NK+SG + I +L +
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCT------------------------ELKLL 249
Query: 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELS-RLPSLVHMLLDNNNLTGYX 218
I N G +P L ++ + N +G+IP LS +L + L N+ G
Sbjct: 250 NISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAV 307
Query: 219 XXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRI-PNL 276
+NNF G + M L L L G +P+ L+ + +L
Sbjct: 308 PPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASL 367
Query: 277 GYLDLSSNQLNGSIPPGRLSLNITTIK---LSNNKLTGTIPSNFSGLPRLQRLFIANNSL 333
LDLSSN +G I P T++ L NN TG IP S L L ++ N L
Sbjct: 368 LTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYL 427
Query: 334 SGSIPSSI 341
SG+IPSS+
Sbjct: 428 SGTIPSSL 435
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 148 EELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 207
E+L L + I G +F N M+ N +SG IP E+ +P L +
Sbjct: 599 EQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFIL 658
Query: 208 LLDNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267
L +N+++G +N +G IP + S ++ L ++ L N +L GP+
Sbjct: 659 NLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR-IPQAMSALTMLTEIDLSNNNLSGPI 717
Query: 268 PDLSR 272
P++ +
Sbjct: 718 PEMGQ 722
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 269 DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 328
D+SR NL +LD+SSN + IP + + +S NKL+G S L+ L I
Sbjct: 192 DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 251
Query: 329 ANNSLSGSIP 338
++N G IP
Sbjct: 252 SSNQFVGPIP 261
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 281 LSSNQLNGSIPPGRLSLNITTIKLSNNKLTG--TIPSNFSGLPRLQRLFIANNSLSGSIP 338
LS++ +NGS+ + S ++T++ LS N L+G T ++ L+ L +++N+L P
Sbjct: 81 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFP 138
Query: 339 SSIWQSRTLNATETFILDFQNNNLT 363
+ LN+ E +LD N+++
Sbjct: 139 GKVSGGLKLNSLE--VLDLSANSIS 161
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 120/294 (40%), Gaps = 44/294 (14%)
Query: 100 PEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRI 159
P + S L L +N +SG+IP +G++ P+EL Y+ L+ +
Sbjct: 412 PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 471
Query: 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYXX 219
+D N ++G +P +N ++NN ++G+IP + RL +L + L NN+ +G
Sbjct: 472 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Query: 220 XXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLK--------LSLRNCSLQGPMPDLS 271
+ N F GT A + K+ + ++N ++
Sbjct: 532 AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAG 591
Query: 272 RIPNLGYLDLSSNQLNGSIPPGRLS----LNITT-------------------IKLSNNK 308
+ L + + S QLN RLS NIT+ + +S N
Sbjct: 592 NL--LEFQGIRSEQLN------RLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNM 643
Query: 309 LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNL 362
L+G IP +P L L + +N +SGSIP + R LN ILD +N L
Sbjct: 644 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN-----ILDLSSNKL 692
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 51/199 (25%)
Query: 147 PEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVH 206
P L +L + + NY+SG++P S +L+K R + N + G+IP EL + +L
Sbjct: 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470
Query: 207 MLLDNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP 266
++LD N+LTG IP+ SN +
Sbjct: 471 LILDFNDLTG-------------------------EIPSGLSNCT--------------- 490
Query: 267 MPDLSRIPNLGYLDLSSNQLNGSIPP--GRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQ 324
NL ++ LS+N+L G IP GRL N+ +KLSNN +G IP+ L
Sbjct: 491 --------NLNWISLSNNRLTGEIPKWIGRLE-NLAILKLSNNSFSGNIPAELGDCRSLI 541
Query: 325 RLFIANNSLSGSIPSSIWQ 343
L + N +G+IP+++++
Sbjct: 542 WLDLNTNLFNGTIPAAMFK 560
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 31/255 (12%)
Query: 110 ILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRIQIDQNYISGS 169
ILDF N ++G IP + N P+ +G L L +++ N SG+
Sbjct: 472 ILDF--NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Query: 170 LPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV---------HMLLDNNNLT----- 215
+P + +N N +G IP + + + ++ + N+ +
Sbjct: 530 IPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHG 589
Query: 216 --------GYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267
G + + G T P ++ N ++ L + L G +
Sbjct: 590 AGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP-TFDNNGSMMFLDMSYNMLSGYI 648
Query: 268 P-DLSRIPNLGYLDLSSNQLNGSIPP--GRL-SLNITTIKLSNNKLTGTIPSNFSGLPRL 323
P ++ +P L L+L N ++GSIP G L LNI + LS+NKL G IP S L L
Sbjct: 649 PKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI--LDLSSNKLDGRIPQAMSALTML 706
Query: 324 QRLFIANNSLSGSIP 338
+ ++NN+LSG IP
Sbjct: 707 TEIDLSNNNLSGPIP 721
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 99 SPEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDR 158
SP + LD +N +SG IPKEIG++ P+E+G L L+
Sbjct: 625 SPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 684
Query: 159 IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSL-VHMLLDNNNLTGY 217
+ + N + G +P++ + L ++NN++SG I PE+ + + L+N L GY
Sbjct: 685 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI-PEMGQFETFPPAKFLNNPGLCGY 743
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 95/248 (38%), Gaps = 32/248 (12%)
Query: 100 PEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRI 159
P +G S L LD NK+SG + I +L +
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCT------------------------ELKLL 252
Query: 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELS-RLPSLVHMLLDNNNLTGYX 218
I N G +P L ++ + N +G+IP LS +L + L N+ G
Sbjct: 253 NISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAV 310
Query: 219 XXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRI-PNL 276
+NNF G + M L L L G +P+ L+ + +L
Sbjct: 311 PPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASL 370
Query: 277 GYLDLSSNQLNGSIPPGRLSLNITTIK---LSNNKLTGTIPSNFSGLPRLQRLFIANNSL 333
LDLSSN +G I P T++ L NN TG IP S L L ++ N L
Sbjct: 371 LTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYL 430
Query: 334 SGSIPSSI 341
SG+IPSS+
Sbjct: 431 SGTIPSSL 438
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 148 EELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 207
E+L L + I G +F N M+ N +SG IP E+ +P L +
Sbjct: 602 EQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFIL 661
Query: 208 LLDNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267
L +N+++G +N +G IP + S ++ L ++ L N +L GP+
Sbjct: 662 NLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR-IPQAMSALTMLTEIDLSNNNLSGPI 720
Query: 268 PDLSR 272
P++ +
Sbjct: 721 PEMGQ 725
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 269 DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 328
D+SR NL +LD+SSN + IP + + +S NKL+G S L+ L I
Sbjct: 195 DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 254
Query: 329 ANNSLSGSIP 338
++N G IP
Sbjct: 255 SSNQFVGPIP 264
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 281 LSSNQLNGSIPPGRLSLNITTIKLSNNKLTG--TIPSNFSGLPRLQRLFIANNSLSGSIP 338
LS++ +NGS+ + S ++T++ LS N L+G T ++ L+ L +++N+L P
Sbjct: 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFP 141
Query: 339 SSIWQSRTLNATETFILDFQNNNLT 363
+ LN+ E +LD N+++
Sbjct: 142 GKVSGGLKLNSLE--VLDLSANSIS 164
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 129/334 (38%), Gaps = 76/334 (22%)
Query: 31 ITDPIEVSALRSIKKSLVDDYSKLSNW-NRGDPCTSNWTGVLCFNTTMDDGYXXXXXXXX 89
+ +P + AL IKK L + + LS+W D C W GVLC D
Sbjct: 2 LCNPQDKQALLQIKKDL-GNPTTLSSWLPTTDCCNRTWLGVLC----DTDTQTYRVNNLD 56
Query: 90 XXXXXXXXXSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEE 149
P L+ L L+F++ G I +G I P
Sbjct: 57 LSGLNLPKPYPIPSSLANLPYLNFLY---IGGINNLVGPI-----------------PPA 96
Query: 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 209
+ L +L + I +SG++P + + + N++SG +PP +S LP+LV +
Sbjct: 97 IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156
Query: 210 DNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLL-KLSLRNCSLQGPMP 268
D N ++G IP SY + SKL +++ L G +P
Sbjct: 157 DGNRISG-------------------------AIPDSYGSFSKLFTSMTISRNRLTGKIP 191
Query: 269 DLSRIPNLGYLDLSSNQLNG----------------------SIPPGR--LSLNITTIKL 304
NL ++DLS N L G + G+ LS N+ + L
Sbjct: 192 PTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDL 251
Query: 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP 338
NN++ GT+P + L L L ++ N+L G IP
Sbjct: 252 RNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 243 IPASYSNMSKLLKLSLRNCS-LQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLN-I 299
IP+S +N+ L L + + L GP+P ++++ L YL ++ ++G+IP + +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 300 TTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSS 340
T+ S N L+GT+P + S LP L + N +SG+IP S
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS 168
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 307 NKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS 366
N L G IP + L +L L+I + ++SG+IP + Q +TL LDF N L
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL-----VTLDFSYNAL---- 137
Query: 367 GSFNIPPNVT 376
S +PP+++
Sbjct: 138 -SGTLPPSIS 146
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 9/110 (8%)
Query: 612 RSFTYGEMALATNNFNS------STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGE- 664
SF++ E+ TNNF+ ++G+GG+G VYKG + + TV K A + E
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 66
Query: 665 --KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
++F EI+ +++ H NLV L+G+ + + LVY +M NG+L D+LS
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 116
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 9/110 (8%)
Query: 612 RSFTYGEMALATNNFNS------STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGE- 664
SF++ E+ TNNF+ ++G+GG+G VYKG + + TV K A + E
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 665 --KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
++F EI+ +++ H NLV L+G+ + + LVY +M NG+L D+LS
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 9/110 (8%)
Query: 612 RSFTYGEMALATNNFNS------STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGE- 664
SF++ E+ TNNF+ ++G+GG+G VYKG + + TV K A + E
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 665 --KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
++F EI+ +++ H NLV L+G+ + + LVY +M NG+L D+LS
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 612 RSFTYGEMALATNNFNS------STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGE- 664
SF++ E+ TNNF+ + G+GG+G VYKG + + TV K A + E
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 63
Query: 665 --KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
++F EI+ ++ H NLV L+G+ + + LVY + NG+L D+LS
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLS 113
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 619 MALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH 678
M + + +IG G +G V+ G + VA+K +EGS+ E +F+ E + + +L
Sbjct: 22 MVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSM-SEDDFIEEAEVMMKLS 80
Query: 679 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGICF 725
H LV L G C E+ LV+EFM +G L D L G+F+ G+C
Sbjct: 81 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 130
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 676
G+ + + +IG G +G V+ G + VA+K +EG++ E++F+ E + + +
Sbjct: 3 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMK 61
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGICF 725
L H LV L G C E+ LV+EFM +G L D L G+F+ G+C
Sbjct: 62 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 113
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
+IG G +G V+ G + VA+K +EG++ E++F+ E + + +L H LV L G C
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGICF 725
E+ LV+EFM +G L D L G+F+ G+C
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 110
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
+IG G +G V+ G + VA+K +EG++ E++F+ E + + +L H LV L G C
Sbjct: 12 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGICF 725
E+ LV+EFM +G L D L G+F+ G+C
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 108
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
+IG G +G V+ G + VA+K +EG++ E++F+ E + + +L H LV L G C
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGICF 725
E+ LV+EFM +G L D L G+F+ G+C
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 110
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 676
G+ + + +IG G +G V+ G + VA+K +EG++ E++F+ E + + +
Sbjct: 1 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMK 59
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGICF 725
L H LV L G C E+ LV EFM +G L D L G+F+ G+C
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL 111
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 105
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 64
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 101
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 67
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 104
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 270
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 307
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 610 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFL 668
G S Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL
Sbjct: 1 GHMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 59
Query: 669 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
E + + H NLV L+G C E ++ EFM+ G L D L
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 64
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 101
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 76
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 113
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 65
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 610 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFL 668
G S Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL
Sbjct: 1 GHMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 59
Query: 669 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
E + + H NLV L+G C E ++ EFM+ G L D L
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 309
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 346
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 674
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 267
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ H NLV L+G C E ++ EFM+ G L D L
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 304
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 631 QIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
++G G YG+VY+G+ ++ VAVK +E +++ E EFL E + + H NLV L+G C
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 690 DEEGEQMLVYEFMSNGTLRDQL 711
E ++ EFM+ G L D L
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYL 98
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 631 QIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
++G G YG+VY+G+ ++ VAVK +E +++ E EFL E + + H NLV L+G C
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 690 DEEGEQMLVYEFMSNGTLRDQL 711
E ++ EFM+ G L D L
Sbjct: 77 TREPPFYIITEFMTYGNLLDYL 98
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 631 QIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
++G G +G+VY+G+ ++ VAVK +E +++ E EFL E + + H NLV L+G C
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 690 DEEGEQMLVYEFMSNGTLRDQL 711
E ++ EFM+ G L D L
Sbjct: 77 TREPPFYIITEFMTYGNLLDYL 98
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 631 QIGQGGYGKVY----KGILP--DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 684
++G+G +GKV+ +LP D +VAVK +E S ++F E + L+ L H+++V
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 685 LVGYCDEEGEQMLVYEFMSNGTL 707
G C E ++V+E+M +G L
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDL 107
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 631 QIGQGGYGKVY----KGILP--DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 684
++G+G +GKV+ +LP D +VAVK +E S ++F E + L+ L H+++V
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 685 LVGYCDEEGEQMLVYEFMSNGTL 707
G C E ++V+E+M +G L
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDL 101
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 676
G M L ++G G +G V G VAVK +EGS+ E EF E Q + +
Sbjct: 1 GHMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMK 59
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L H LV G C +E +V E++SNG L + L
Sbjct: 60 LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL 94
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 13 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 71
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 72 VSEE-PIXIVTEYMSKGSLLDFLKG 95
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 247
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 248 VSEE-PIYIVTEYMSKGSLLDFLKG 271
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 247
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 248 VSEE-PIYIVTEYMSKGSLLDFLKG 271
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 14 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 72
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 73 VSEE-PIYIVTEYMSKGSLLDFLKG 96
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 12 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 70
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 71 VSEE-PIYIVTEYMSKGSLLDFLKG 94
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 691 EEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 333 EE-PIYIVTEYMSKGSLLDFLKG 354
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 16 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 74
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 75 VSEE-PIYIVTEYMSKGSLLDFLKG 98
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 631 QIGQGGYGKVY----KGILP--DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 684
++G+G +GKV+ +LP D +VAVK +E S ++F E + L+ L H+++V
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 685 LVGYCDEEGEQMLVYEFMSNGTL 707
G C E ++V+E+M +G L
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDL 130
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 82 VSEE-PIYIVIEYMSKGSLLDFLKG 105
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 82 VSEE-PIYIVIEYMSKGSLLDFLKG 105
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 631 QIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
++G G YG+VY G+ ++ VAVK +E +++ E EFL E + + H NLV L+G C
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 690 DEEGEQMLVYEFMSNGTLRDQL 711
E +V E+M G L D L
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYL 119
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 82 VSEE-PIYIVTEYMSKGSLLDFLKG 105
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 82 VSEE-PIYIVTEYMSKGSLLDFLKG 105
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 82 VSEE-PIYIVCEYMSKGSLLDFLKG 105
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 247
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 248 VSEE-PIYIVGEYMSKGSLLDFLKG 271
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 190 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAV 248
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 249 VSEE-PIYIVTEYMSKGSLLDFLKG 272
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G L D L G
Sbjct: 82 VSEE-PIYIVMEYMSKGCLLDFLKG 105
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G L D L G
Sbjct: 82 VSEE-PIYIVTEYMSKGCLLDFLKG 105
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 610 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLT 669
G YG + + ++G G +G V G VA+K +EGS+ E EF+
Sbjct: 1 GTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIE 59
Query: 670 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
E + + L H LV L G C ++ ++ E+M+NG L + L
Sbjct: 60 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 101
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQEGSLQGE-------KEFLTEIQ 672
LA N QIG+GG+G V+KG ++ D +VVA+K G +GE +EF E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 673 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+S L+H N+V L G +V EF+ G L +L
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL 112
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + ++ H LV L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAV 81
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+MS G+L D L G
Sbjct: 82 VSEE-PIYIVTEYMSKGSLLDFLKG 105
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQEGSLQGE-------KEFLTEIQ 672
LA N QIG+GG+G V+KG ++ D +VVA+K G +GE +EF E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 673 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+S L+H N+V L G +V EF+ G L +L
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL 112
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQEGSLQGE-------KEFLTEIQ 672
LA N QIG+GG+G V+KG ++ D +VVA+K G +GE +EF E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 673 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+S L+H N+V L G +V EF+ G L +L
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL 112
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 78
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+M+ G+L D L G
Sbjct: 79 VSEE-PIYIVTEYMNKGSLLDFLKG 102
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 78
Query: 689 CDEEGEQMLVYEFMSNGTLRDQLSG 713
EE +V E+M+ G+L D L G
Sbjct: 79 VSEE-PIYIVTEYMNKGSLLDFLKG 102
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLS 675
YG + + ++G G +G V G VA+K +EGS+ E EF+ E + +
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMM 74
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L H LV L G C ++ ++ E+M+NG L + L
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLS 675
YG + + ++G G +G V G VA+K +EGS+ E EF+ E + +
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMM 74
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L H LV L G C ++ ++ E+M+NG L + L
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRLH 678
+ ++G+G YG VYK G +VA+KR + L E E + EI L LH
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR---LDAEDEGIPSTAIREISLLKELH 77
Query: 679 HRNLVSLVGYCDEEGEQMLVYEFMSN 704
H N+VSL+ E LV+EFM
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEK 103
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRLH 678
+ ++G+G YG VYK G +VA+KR + L E E + EI L LH
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR---LDAEDEGIPSTAIREISLLKELH 77
Query: 679 HRNLVSLVGYCDEEGEQMLVYEFMSN 704
H N+VSL+ E LV+EFM
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEK 103
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKG----ILP--DGTVVAVKRAQEGSLQGEKEFLTEIQFL 674
+ +N ++G+G +GKV+ + P D +VAVK ++ S K+F E + L
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
+ L H ++V G C E ++V+E+M +G L
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDL 102
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEK--EFLTEIQFLS 675
+M + + N +IG G +G V++ G+ VAVK E E+ EFL E+ +
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
RL H N+V +G + +V E++S G+L
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEK--EFLTEIQFLS 675
+M + + N +IG G +G V++ G+ VAVK E E+ EFL E+ +
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
RL H N+V +G + +V E++S G+L
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDH 116
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 632 IGQGGYGKVYKGILPDGT-----VVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSL 685
IG G +G+VYKG+L + VA+K + G + ++ +FL E + + H N++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 686 VGYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGI 723
G + M++ E+M NG L L G FSV++ G+
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGM 152
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 631 QIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 684
++G+G +GKV+ D +VAVK ++ +L K+F E + L+ L H ++V
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 685 LVGYCDEEGEQMLVYEFMSNGTL 707
G C + ++V+E+M +G L
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDL 104
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 620 ALATNNFNSSTQIGQGGYGKVYKG-ILPDGTVV--AVKRAQE-GSLQGEKEFLTEIQFLS 675
L N+ IG+G +G+V K I DG + A+KR +E S ++F E++ L
Sbjct: 11 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 70
Query: 676 RL-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+L HH N+++L+G C+ G L E+ +G L D L
Sbjct: 71 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 107
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 620 ALATNNFNSSTQIGQGGYGKVYKG-ILPDGTVV--AVKRAQE-GSLQGEKEFLTEIQFLS 675
L N+ IG+G +G+V K I DG + A+KR +E S ++F E++ L
Sbjct: 21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 80
Query: 676 RL-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+L HH N+++L+G C+ G L E+ +G L D L
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 112
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKG-ILPDGTVV--AVKRAQE-GSLQGEKEFLTEIQFLSR 676
L N+ IG+G +G+V K I DG + A+KR +E S ++F E++ L +
Sbjct: 19 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 78
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L HH N+++L+G C+ G L E+ +G L D L
Sbjct: 79 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 114
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 117
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G V G VA+K +EGS+ E EF+ E + + L H LV L G C
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 691 EEGEQMLVYEFMSNGTLRDQL 711
++ ++ E+M+NG L + L
Sbjct: 70 KQRPIFIITEYMANGCLLNYL 90
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G V G VA+K +EGS+ E EF+ E + + L H LV L G C
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 691 EEGEQMLVYEFMSNGTLRDQL 711
++ ++ E+M+NG L + L
Sbjct: 74 KQRPIFIITEYMANGCLLNYL 94
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G V G VA+K +EGS+ E EF+ E + + L H LV L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 691 EEGEQMLVYEFMSNGTLRDQL 711
++ ++ E+M+NG L + L
Sbjct: 75 KQRPIFIITEYMANGCLLNYL 95
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 118
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G V G VA+K +EGS+ E EF+ E + + L H LV L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 691 EEGEQMLVYEFMSNGTLRDQL 711
++ ++ E+M+NG L + L
Sbjct: 75 KQRPIFIITEYMANGCLLNYL 95
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 114
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 113
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 120
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 116
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 119
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 113
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 144
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 113
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 111
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ EF+ G+LR+ L I H
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDH 116
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 131
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 631 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSGIFSVIRH 720
G C G + L+ E++ G+LRD L I H
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 131
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 624 NNFNSSTQIGQGGYGKVYK----GILP--DGTVVAVKR-AQEGSLQGEKEFLTEIQFLSR 676
NN IG+G +G+V++ G+LP T+VAVK +E S + +F E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
+ N+V L+G C L++E+M+ G L + L +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSM 144
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 632 IGQGGYGKVYKGILPDGTVVAVKRAQ----EGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 687
IG GG+GKVY+ G VAVK A+ E Q + E + + L H N+++L G
Sbjct: 15 IGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 688 YCDEEGEQMLVYEFMSNGTLRDQLSG 713
C +E LV EF G L LSG
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSG 99
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 614 FTYGEMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-E 666
F E +A S ++GQG +G VY KG++ D T VA+K E + E+ E
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 667 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
FL E + + ++V L+G + +++ E M+ G L+ L +
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 113
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGI 104
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 80
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 81 QE-PIYIITEYMENGSLVDFLKTPSGI 106
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGI 104
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 605 SIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQE 658
S+ +D + + N +G+G +GKV K T VAVK +E
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 659 GSLQGE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708
+ E ++ L+E L +++H +++ L G C ++G +L+ E+ G+LR
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 79
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 80 QE-PIYIITEYMENGSLVDFLKTPSGI 105
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 612 RSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEK-EFLT 669
R+ + L + QIG+G +G+V+ G L D T+VAVK +E K +FL
Sbjct: 102 RAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ 161
Query: 670 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705
E + L + H N+V L+G C ++ +V E + G
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 605 SIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQE 658
S+ +D + + N +G+G +GKV K T VAVK +E
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 659 GSLQGE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708
+ E ++ L+E L +++H +++ L G C ++G +L+ E+ G+LR
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 74
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 75 QE-PIYIITEYMENGSLVDFLKTPSGI 100
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 621 LATNNFNSSTQIGQGGYGKVYK----GIL--PDGTVVAVKRAQEGSLQGE-KEFLTEIQF 673
A +G+G +GKV + GI P VAVK +EG+ E K +TE++
Sbjct: 24 FARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKI 83
Query: 674 LSRL-HHRNLVSLVGYCDEE-GEQMLVYEFMSNGTLRDQL 711
L+ + HH N+V+L+G C ++ G M++ E+ G L + L
Sbjct: 84 LTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 83
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 84 QE-PIYIITEYMENGSLVDFLKTPSGI 109
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 84
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 85 QE-PIYIITEYMENGSLVDFLKTPSGI 110
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 605 SIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQE 658
S+ +D + + N +G+G +GKV K T VAVK +E
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 659 GSLQGE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708
+ E ++ L+E L +++H +++ L G C ++G +L+ E+ G+LR
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGI 104
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 612 RSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEK-EFLT 669
R+ + L + QIG+G +G+V+ G L D T+VAVK +E K +FL
Sbjct: 102 RAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ 161
Query: 670 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705
E + L + H N+V L+G C ++ +V E + G
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 87
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 88 QE-PIYIITEYMENGSLVDFLKTPSGI 113
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G + T VAVK + G++ + FL E + L H LV L
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT 77
Query: 691 EEGEQMLVYEFMSNGTLRDQLS 712
+E ++ EFM+ G+L D L
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLK 99
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 73
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 74 QE-PIYIITEYMENGSLVDFLKTPSGI 99
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 670
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 671 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
+ + ++V L+G + +++ E M+ G L+ L +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 122
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 691 EEGEQMLVYEFMSNGTLRDQLS 712
EE +V E+M+ G+L D L
Sbjct: 75 EE-PIYIVTEYMNKGSLLDFLK 95
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 84
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 85 QE-PIYIITEYMENGSLVDFLKTPSGI 110
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 86
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 87 QE-PIYIITEYMENGSLVDFLKTPSGI 112
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 670
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 671 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
+ + ++V L+G + +++ E M+ G L+ L +
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 112
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 670
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 671 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
+ + ++V L+G + +++ E M+ G L+ L +
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 144
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 670
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 671 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
+ + ++V L+G + +++ E M+ G L+ L +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 122
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 670
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 671 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
+ + ++V L+G + +++ E M+ G L+ L +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 115
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 88
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 89 QE-PIYIITEYMENGSLVDFLKTPSGI 114
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 670
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 671 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
+ + ++V L+G + +++ E M+ G L+ L +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 107
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 670
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 671 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
+ + ++V L+G + +++ E M+ G L+ L +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 115
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 670
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 671 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
+ + ++V L+G + +++ E M+ G L+ L +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 116
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 632 IGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLV 686
IG G +G+V +G L + VA+K + G + ++ EFL+E + + H N++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGI 723
G M++ EFM NG L L G F+VI+ G+
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 121
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 670
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 671 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
+ + ++V L+G + +++ E M+ G L+ L +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 116
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 670
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 671 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
+ + ++V L+G + +++ E M+ G L+ L +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 109
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 670
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 671 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
+ + ++V L+G + +++ E M+ G L+ L +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 109
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 632 IGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLV 686
IG G +G+V +G L + VA+K + G + ++ EFL+E + + H N++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGI 723
G M++ EFM NG L L G F+VI+ G+
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 123
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHH 679
+++ F ++G G Y VYKG+ G VA+K + S +G + EI + L H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 680 RNLVSLVGYCDEEGEQMLVYEFMSN 704
N+V L E + LV+EFM N
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN 87
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+L+H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+G + + ++ E M+ G L+ L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFL 125
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+L+H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+G + + ++ E M+ G L+ L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFL 139
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 610 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-- 666
G S + A + + + T++G+G YG+VYK I VA+KR + L+ E+E
Sbjct: 20 GSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR---LEHEEEGV 76
Query: 667 ---FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+ E+ L L HRN++ L L++E+ N
Sbjct: 77 PGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN 117
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 60
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMS 703
L+H N+V L+ E + LV+EF+S
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLS 88
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 632 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGY 688
+G+G YG V K D G +VA+K+ E +K + EI+ L +L H NLV+L+
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 689 CDEEGEQMLVYEFMSNGTLRD 709
C ++ LV+EF+ + L D
Sbjct: 93 CKKKKRWYLVFEFVDHTILDD 113
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 60
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMS 703
L+H N+V L+ E + LV+EF+S
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLS 88
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 58
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMS 703
L+H N+V L+ E + LV+EF+S
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLS 86
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 59
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMS 703
L+H N+V L+ E + LV+EF+S
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLS 87
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 596 SRRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYK 642
+R H +K+ G+R+F T E A L N + +G G +G+V
Sbjct: 4 EKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCS 63
Query: 643 GILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697
G L VA+K + G + ++ +FL E + + H N++ L G + M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 698 VYEFMSNGTLRDQL---SGIFSVIRHSGI 723
V E+M NG+L L F+VI+ G+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 596 SRRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYK 642
+R H +K+ G+R+F T E A L N + +G G +G+V
Sbjct: 4 EKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCS 63
Query: 643 GILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697
G L VA+K + G + ++ +FL E + + H N++ L G + M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 698 VYEFMSNGTLRDQL---SGIFSVIRHSGI 723
V E+M NG+L L F+VI+ G+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 596 SRRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYK 642
+R H +K+ G+R+F T E A L N + +G G +G+V
Sbjct: 4 EKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCS 63
Query: 643 GILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697
G L VA+K + G + ++ +FL E + + H N++ L G + M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 698 VYEFMSNGTLRDQL---SGIFSVIRHSGI 723
V E+M NG+L L F+VI+ G+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 596 SRRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYK 642
+R H +K+ G+R+F T E A L N + +G G +G+V
Sbjct: 4 EKRLHFGNGHLKLPGLRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCS 63
Query: 643 GILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697
G L VA+K + G + ++ +FL E + + H N++ L G + M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 698 VYEFMSNGTLRDQL---SGIFSVIRHSGI 723
V E+M NG+L L F+VI+ G+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKL 304
A+ ++L +L+L C L D +P LG LDLS NQL G+ +T + +
Sbjct: 49 ATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 107
Query: 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364
S N+LT GL LQ L++ N L P + + L L NNNLT
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK-----LSLANNNLTE 162
Query: 365 I-SGSFNIPPNV-TVRLRGNPFCLNTNAEQFCGSH 397
+ +G N N+ T+ L+ N L T + F GSH
Sbjct: 163 LPAGLLNGLENLDTLLLQEN--SLYTIPKGFFGSH 195
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 596 SRRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYK 642
+R H +K+ G+R+F T E A L N + +G G +G+V
Sbjct: 4 EKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCS 63
Query: 643 GILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697
G L VA+K + G + ++ +FL E + + H N++ L G + M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 698 VYEFMSNGTLRDQL---SGIFSVIRHSGI 723
V E+M NG+L L F+VI+ G+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 632 IGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLV 686
IG G +G+V G L VA+K + G + ++ +FL+E + + H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 687 GYCDEEGEQMLVYEFMSNGTLRD---QLSGIFSVIRHSGI 723
G + M++ EFM NG+L Q G F+VI+ G+
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 140
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 632 IGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLV 686
IG G +G+V G L VA+K + G + ++ +FL+E + + H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 687 GYCDEEGEQMLVYEFMSNGTLRD---QLSGIFSVIRHSGI 723
G + M++ EFM NG+L Q G F+VI+ G+
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 114
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 691 EEGEQMLVYEFMSNGTLRDQL---SGI 714
+E ++ E+M NG+L D L SGI
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGI 104
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ G + T VAVK + G++ + FL E + L H LV L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT 78
Query: 691 EEGEQMLVYEFMSNGTLRDQLS 712
E ++ E+M+ G+L D L
Sbjct: 79 REEPIYIITEYMAKGSLLDFLK 100
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKL 304
A+ ++L +L+L C L D +P LG LDLS NQL G+ +T + +
Sbjct: 50 ATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 108
Query: 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364
S N+LT GL LQ L++ N L P + + L L NNNLT
Sbjct: 109 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK-----LSLANNNLTE 163
Query: 365 I-SGSFNIPPNV-TVRLRGNPFCLNTNAEQFCGSH 397
+ +G N N+ T+ L+ N L T + F GSH
Sbjct: 164 LPAGLLNGLENLDTLLLQEN--SLYTIPKGFFGSH 196
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKL 304
A+ ++L +L+L C L D +P LG LDLS NQL G+ +T + +
Sbjct: 49 ATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 107
Query: 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364
S N+LT GL LQ L++ N L P + + L L NN+LT
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK-----LSLANNDLTE 162
Query: 365 I-SGSFNIPPNV-TVRLRGNPFCLNTNAEQFCGSH 397
+ +G N N+ T+ L+ N L T + F GSH
Sbjct: 163 LPAGLLNGLENLDTLLLQEN--SLYTIPKGFFGSH 195
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+G + + ++ E M+ G L+ L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFL 131
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+G + + ++ E M+ G L+ L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFL 124
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+G + + ++ E M+ G L+ L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFL 125
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+G + + ++ E M+ G L+ L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFL 125
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+G + + ++ E M+ G L+ L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFL 124
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+G + + ++ E M+ G L+ L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFL 139
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+G + + ++ E M+ G L+ L
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFL 116
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLR 708
+G + + ++ E M+ G L+
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLK 138
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+G + + ++ E M+ G L+ L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFL 165
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 596 SRRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYK 642
+R H +K+ G+R++ T E A L N + +G G +G+V
Sbjct: 2 EKRLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCS 61
Query: 643 GILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697
G L VA+K + G + ++ +FL E + + H N++ L G + M+
Sbjct: 62 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 121
Query: 698 VYEFMSNGTLRDQL---SGIFSVIRHSGI 723
V E+M NG+L L F+VI+ G+
Sbjct: 122 VTEYMENGSLDSFLRKHDAQFTVIQLVGM 150
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKL 304
A+ ++L +L+L C L D +P LG LDLS NQL G+ +T + +
Sbjct: 49 ATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 107
Query: 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364
S N+LT GL LQ L++ N L P + + L L NN LT
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK-----LSLANNQLTE 162
Query: 365 I-SGSFNIPPNV-TVRLRGNPFCLNTNAEQFCGSH 397
+ +G N N+ T+ L+ N L T + F GSH
Sbjct: 163 LPAGLLNGLENLDTLLLQEN--SLYTIPKGFFGSH 195
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 57
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLR 708
+G + + ++ E M+ G L+
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLK 148
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+G + + ++ E M+ G L+ L
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFL 142
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 57
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKL 304
A+ ++L +L+L C L D +P LG LDLS NQL G+ +T + +
Sbjct: 49 ATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 107
Query: 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364
S N+LT GL LQ L++ N L P + + L L NN LT
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK-----LSLANNQLTE 162
Query: 365 I-SGSFNIPPNV-TVRLRGNPFCLNTNAEQFCGSH 397
+ +G N N+ T+ L+ N L T + F GSH
Sbjct: 163 LPAGLLNGLENLDTLLLQEN--SLYTIPKGFFGSH 195
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 59
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 59
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 60
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 59
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 596 SRRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYK 642
+R H +K+ G+R++ T E A L N + +G G +G+V
Sbjct: 4 EKRLHFGNGHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCS 63
Query: 643 GILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697
G L VA+K + G + ++ +FL E + + H N++ L G + M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 698 VYEFMSNGTLRDQL---SGIFSVIRHSGI 723
V E+M NG+L L F+VI+ G+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 57
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 57
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 58
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 59
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 58
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 58
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 63
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQ 90
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 59
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 58
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 596 SRRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYK 642
+R H +K+ G+R++ T E A L N + +G G +G+V
Sbjct: 4 EKRLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCS 63
Query: 643 GILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697
G L VA+K + G + ++ +FL E + + H N++ L G + M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 698 VYEFMSNGTLRDQL---SGIFSVIRHSGI 723
V E+M NG+L L F+VI+ G+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 58
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 58
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 59
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 58
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 632 IGQGGYGKVYKGIL------PDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVS 684
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 685 LVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+G + + ++ E M+ G L+ L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFL 139
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 57
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 60
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 66
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQ 93
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 66
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQ 93
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 60
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 61
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+EF+
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ 90
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 59
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 60
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 632 IGQGGYGKVYKGILP---DGT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSL 685
+G+G +GKV DGT +VAVK +EG Q + EI+ L L+H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQL 711
G C+++GE+ LV E++ G+LRD L
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL 103
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 632 IGQGGYGKVYKGILP---DGT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSL 685
+G+G +GKV DGT +VAVK +EG Q + EI+ L L+H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQL 711
G C+++GE+ LV E++ G+LRD L
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL 104
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 21/149 (14%)
Query: 596 SRRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYK 642
+R H +K+ G+R+F T E A L N + +G G +G+V
Sbjct: 4 EKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCS 63
Query: 643 GILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697
G L VA+K + G + ++ +FL E + + H N++ L G + M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 698 VYEFMSNGTLRDQL---SGIFSVIRHSGI 723
V E M NG+L L F+VI+ G+
Sbjct: 124 VTEXMENGSLDSFLRKHDAQFTVIQLVGM 152
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 15 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 71
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 72 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 36 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 92
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 93 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 140
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 35 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 91
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 92 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 139
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 76 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 132
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 133 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 22 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 78
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 79 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 17 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 73
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 17 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 73
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 9 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 65
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 66 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 17 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 73
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 16 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 72
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 73 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKL 304
A+ ++L +L+L C L D +P LG LDLS NQL G+ +T + +
Sbjct: 49 ATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 107
Query: 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364
S N+LT GL LQ L++ N L P + + L L NN LT
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK-----LSLANNQLTE 162
Query: 365 I-SGSFNIPPNV-TVRLRGNPFCLNTNAEQFCGSH 397
+ +G N N+ T+ L+ N L T + F GSH
Sbjct: 163 LPAGLLNGLENLDTLLLQEN--SLYTIPKGFFGSH 195
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 16 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 72
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 73 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ T VAVK + GS+ E FL E + L H LV L
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVT 80
Query: 691 EEGEQMLVYEFMSNGTLRDQLS 712
+E ++ EFM+ G+L D L
Sbjct: 81 KEP-IYIITEFMAKGSLLDFLK 101
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 17 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 73
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKL 304
A+ ++L +L+L C L D +P LG LDLS NQL G+ +T + +
Sbjct: 49 ATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 107
Query: 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364
S N+LT GL LQ L++ N L P + + L L NN LT
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK-----LSLANNQLTE 162
Query: 365 I-SGSFNIPPNV-TVRLRGNPFCLNTNAEQFCGSH 397
+ +G N N+ T+ L+ N L T + F GSH
Sbjct: 163 LPAGLLNGLENLDTLLLQEN--SLYTIPKGFFGSH 195
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 14 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 70
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 71 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 12 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 68
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 69 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 18 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 74
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 75 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 18 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 74
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 75 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 663
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 15 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 71
Query: 664 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRD 709
E +FLTE + H N++SL+G C EG ++V +M +G LR+
Sbjct: 72 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 632 IGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLV 686
IG G +G+V G L VA+K + G + ++ +FL E + + H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGI 723
G M+V EFM NG L L G F+VI+ G+
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGM 150
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 625 NFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQEGSLQGEK---EFLTEIQFLSRLHHR 680
NF +IG+G + +VY+ L DG VA+K+ Q L K + + EI L +L+H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTL 707
N++ E+ E +V E G L
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDL 119
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 620 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 679
AL IG+G +G V G G VAVK + + + FL E +++L H
Sbjct: 8 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 64
Query: 680 RNLVSLVGY-CDEEGEQMLVYEFMSNGTLRDQL 711
NLV L+G +E+G +V E+M+ G+L D L
Sbjct: 65 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL 97
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 620 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 679
AL IG+G +G V G G VAVK + + + FL E +++L H
Sbjct: 2 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 58
Query: 680 RNLVSLVGY-CDEEGEQMLVYEFMSNGTLRDQL 711
NLV L+G +E+G +V E+M+ G+L D L
Sbjct: 59 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL 91
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 620 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 679
AL IG+G +G V G G VAVK + + + FL E +++L H
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 245
Query: 680 RNLVSLVGY-CDEEGEQMLVYEFMSNGTLRDQL 711
NLV L+G +E+G +V E+M+ G+L D L
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL 278
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 21/149 (14%)
Query: 596 SRRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYK 642
+R H +K+ G+R++ T E A L N + +G G +G+V
Sbjct: 4 EKRLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCS 63
Query: 643 GILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697
G L VA+K + G + ++ +FL E + + H N++ L G + M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 698 VYEFMSNGTLRDQL---SGIFSVIRHSGI 723
V E M NG+L L F+VI+ G+
Sbjct: 124 VTEXMENGSLDSFLRKHDAQFTVIQLVGM 152
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKL 304
A+ ++L +L+L L D +P LG LDLS NQL G+ +T + +
Sbjct: 49 ATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 107
Query: 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364
S N+LT GL LQ L++ N L P + + L L NNNLT
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK-----LSLANNNLTE 162
Query: 365 I-SGSFNIPPNV-TVRLRGNPFCLNTNAEQFCGSH 397
+ +G N N+ T+ L+ N L T + F GSH
Sbjct: 163 LPAGLLNGLENLDTLLLQEN--SLYTIPKGFFGSH 195
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ T VAVK + GS+ E FL E + L H LV L
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVT 247
Query: 691 EEGEQMLVYEFMSNGTLRDQL 711
+E ++ EFM+ G+L D L
Sbjct: 248 KE-PIYIITEFMAKGSLLDFL 267
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
++G G +G+V+ T VAVK + GS+ E FL E + L H LV L
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVT 253
Query: 691 EEGEQMLVYEFMSNGTLRDQL 711
+E ++ EFM+ G+L D L
Sbjct: 254 KE-PIYIITEFMAKGSLLDFL 273
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 620 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 679
AL IG+G +G V G G VAVK + + + FL E +++L H
Sbjct: 17 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 73
Query: 680 RNLVSLVGY-CDEEGEQMLVYEFMSNGTLRDQL 711
NLV L+G +E+G +V E+M+ G+L D L
Sbjct: 74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL 106
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 624 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGEKE-FLTEIQFLSR 676
NN +G G +GKV + G+ + V VAVK + + EKE ++E++ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
L H N+V+L+G C G +++ E+ G L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 624 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGEKE-FLTEIQFLSR 676
NN +G G +GKV + G+ + V VAVK + + EKE ++E++ +S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
L H N+V+L+G C G +++ E+ G L
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 624 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGEKE-FLTEIQFLSR 676
NN +G G +GKV + G+ + V VAVK + + EKE ++E++ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
L H N+V+L+G C G +++ E+ G L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 624 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGEKE-FLTEIQFLSR 676
NN +G G +GKV + G+ + V VAVK + + EKE ++E++ +S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
L H N+V+L+G C G +++ E+ G L
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+ + + L E E + EI L L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR---LDTETEGVPSTAIREISLLKEL 59
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+ + + L E E + EI L L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR---LDTETEGVPSTAIREISLLKEL 58
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+EF+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKE 666
F E ++ ++GQG +G VY+G D T VAVK E SL+ E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 667 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
FL E + ++V L+G + ++V E M++G L+ L +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 630 TQIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 684
+Q+G+G +G V Y + + G +VAVK+ Q +++F EIQ L LH +V
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 685 LVGYCDEEGEQ--MLVYEFMSNGTLRDQL 711
G G Q LV E++ +G LRD L
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL 105
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 630 TQIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 684
+Q+G+G +G V Y + + G +VAVK+ Q +++F EIQ L LH +V
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 685 LVGYCDEEGEQ--MLVYEFMSNGTLRDQL 711
G G Q LV E++ +G LRD L
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL 104
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQ---EGSLQGEKEFL 668
E++L+ F ++G+ +GKVYKG L VA+K + EG L+ +EF
Sbjct: 22 EISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR--EEFR 77
Query: 669 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
E +RL H N+V L+G ++ +++ + S+G L + L
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 624 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSR 676
+ N +G+G +G+V + GI T VAVK +EG+ E + ++E++ L
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 677 L-HHRNLVSLVGYCDEE-GEQMLVYEFMSNGTL 707
+ HH N+V+L+G C + G M++ EF G L
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKE 666
F E ++ ++GQG +G VY+G D T VAVK E SL+ E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 667 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
FL E + ++V L+G + ++V E M++G L+ L +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKL 304
A+ ++L +L+L L D +P LG LDLS NQL G+ +T + +
Sbjct: 49 ATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 107
Query: 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364
S N+LT GL LQ L++ N L P + + L L NNNLT
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK-----LSLANNNLTE 162
Query: 365 I-SGSFNIPPNV-TVRLRGNPFCLNTNAEQFCGSH 397
+ +G N N+ T+ L+ N L T + F GSH
Sbjct: 163 LPAGLLNGLENLDTLLLQEN--SLYTIPKGFFGSH 195
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKE 666
F E ++ ++GQG +G VY+G D T VAVK E SL+ E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 667 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
FL E + ++V L+G + ++V E M++G L+ L +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKE 666
F E ++ ++GQG +G VY+G D T VAVK E SL+ E
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 667 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
FL E + ++V L+G + ++V E M++G L+ L +
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 111
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKL 304
A+ ++L +L+L L D +P LG LDLS NQL G+ +T + +
Sbjct: 49 ATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 107
Query: 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364
S N+LT GL LQ L++ N L P + + L L NNNLT
Sbjct: 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK-----LSLANNNLTE 162
Query: 365 I-SGSFNIPPNV-TVRLRGNPFCLNTNAEQFCGSH 397
+ +G N N+ T+ L+ N L T + F GSH
Sbjct: 163 LPAGLLNGLENLDTLLLQEN--SLYTIPKGFFGSH 195
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQ---EGSLQGEKEFL 668
E++L+ F ++G+ +GKVYKG L VA+K + EG L+ +EF
Sbjct: 5 EISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR--EEFR 60
Query: 669 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
E +RL H N+V L+G ++ +++ + S+G L + L
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 630 TQIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 684
+Q+G+G +G V Y + + G +VAVK+ Q +++F EIQ L LH +V
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 685 LVGYCDEEGEQ--MLVYEFMSNGTLRDQL 711
G G Q LV E++ +G LRD L
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL 117
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 624 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGEKE-FLTEIQFLSR 676
NN +G G +GKV + G+ + V VAVK + + EKE ++E++ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
L H N+V+L+G C G +++ E+ G L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 624 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGEKE-FLTEIQFLSR 676
NN +G G +GKV + G+ + V VAVK + + EKE ++E++ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
L H N+V+L+G C G +++ E+ G L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 624 NNFNSSTQIGQGGYGKVYK----GILPDGT--VVAVKRAQEGSLQGE-KEFLTEIQFLSR 676
+ N +G+G +G+V + GI T VAVK +EG+ E + ++E++ L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 677 L-HHRNLVSLVGYCDEE-GEQMLVYEFMSNGTL 707
+ HH N+V+L+G C + G M++ EF G L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 630 TQIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 684
+Q+G+G +G V Y + + G +VAVK+ Q +++F EIQ L LH +V
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 685 L--VGYCDEEGEQMLVYEFMSNGTLRDQL 711
V Y E LV E++ +G LRD L
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFL 101
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 631 QIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLV 683
++GQG +G VY+G D T VAVK E SL+ EFL E + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
L+G + ++V E M++G L+ L +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 631 QIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLV 683
++GQG +G VY+G D T VAVK E SL+ EFL E + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
L+G + ++V E M++G L+ L +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 624 NNFNSSTQIGQGGYGKVYK----GILPDGT--VVAVKRAQEGSLQGE-KEFLTEIQFLSR 676
+ N +G+G +G+V + GI T VAVK +EG+ E + ++E++ L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 677 L-HHRNLVSLVGYCDEE-GEQMLVYEFMSNGTL 707
+ HH N+V+L+G C + G M++ EF G L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLS 675
L N + +G G +G+V G L VA+K + G + ++ +FL E +
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGI 723
+ H N++ L G + M+V E+M NG+L L F+VI+ G+
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 123
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 631 QIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLV 683
++GQG +G VY+G D T VAVK E SL+ EFL E + ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
L+G + ++V E M++G L+ L +
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 115
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLS 675
L N + +G G +G+V G L VA+K + G + ++ +FL E +
Sbjct: 30 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGI 723
+ H N++ L G + M+V E+M NG+L L F+VI+ G+
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 140
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRA-----QEGSLQGEKEFLTEIQFL 674
L +G G +G VYKGI +P+G V + A + + EF+ E +
Sbjct: 35 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 94
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
+ + H +LV L+G C Q LV + M +G L
Sbjct: 95 ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCL 126
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRA-----QEGSLQGEKEFLTEIQFL 674
L +G G +G VYKGI +P+G V + A + + EF+ E +
Sbjct: 12 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 71
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
+ + H +LV L+G C Q LV + M +G L
Sbjct: 72 ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCL 103
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 595 ISRRRHSSKTSIKIDGVRSFTYGE---MALATNNFNSSTQIGQGGYGKVYK----GILPD 647
I+ R S+ + + GV + E + +G+G +G+V GI D
Sbjct: 49 ITTRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKD 108
Query: 648 ----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEF 701
VAVK ++ + + + + ++E++ + + H+N+++L+G C ++G ++ E+
Sbjct: 109 KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 168
Query: 702 MSNGTLRDQLSG 713
S G LR+ L
Sbjct: 169 ASKGNLREYLRA 180
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 631 QIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLV 683
++GQG +G VY+G D T VAVK E SL+ EFL E + ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
L+G + ++V E M++G L+ L +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 113
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 632 IGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLV 686
IG G +G+V G L VA+K + G + ++ +FL E + + H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQLS---GIFSVIRHSGI 723
G + M+V E+M NG+L L G F+VI+ G+
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGM 129
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 58
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSN 704
+H N+V L+ E + LV+E +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEHVHQ 85
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 675
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 60
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704
L+H N+V L+ E + LV+E +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEHVDQ 89
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 631 QIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
++G G +GKVYK + G + A K + S + ++++ EI+ L+ H +V L+G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 690 DEEGEQMLVYEFMSNGTL 707
+G+ ++ EF G +
Sbjct: 78 YHDGKLWIMIEFCPGGAV 95
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 632 IGQGGYGKVYKGILP----DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLV 686
IG G +G+V G L VA+K + G + + ++FL+E + + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGI 723
G + M++ E+M NG+L L G F+VI+ G+
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 115
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
++ L+G C ++G ++ E+ S G LR+ L
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 631 QIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
++G G +GKVYK + G + A K + S + ++++ EI+ L+ H +V L+G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 690 DEEGEQMLVYEFMSNGTL 707
+G+ ++ EF G +
Sbjct: 86 YHDGKLWIMIEFCPGGAV 103
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 632 IGQGGYGKVYKGILP----DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLV 686
IG G +G+V G L VA+K + G + + ++FL+E + + H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGI 723
G + M++ E+M NG+L L G F+VI+ G+
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 136
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 632 IGQGGYGKVYKGILP----DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLV 686
IG G +G+V G L VA+K + G + + ++FL+E + + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGI 723
G + M++ E+M NG+L L G F+VI+ G+
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 121
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL 682
++++ ++G G +G V++ G A K ++ EIQ +S L H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 683 VSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
V+L +++ E +++YEFMS G L ++++
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVA 246
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNL 119
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL 682
++++ ++G G +G V++ G A K ++ EIQ +S L H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 683 VSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
V+L +++ E +++YEFMS G L ++++
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVA 140
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNL 119
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 5/193 (2%)
Query: 158 RIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGY 217
++ + N +S K+F L K R ++N+N + L +L + + +N L
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQAL 100
Query: 218 XXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG-PMPDLSRIPNL 276
D N + + P + +++KL LSL LQ P ++ +L
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSL 159
Query: 277 GYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334
L L +NQL +P G + T+KL NN+L F L +L+ L + N
Sbjct: 160 KELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218
Query: 335 GSIPSSIWQSRTL 347
+ I+ ++ L
Sbjct: 219 CTCNGIIYMAKWL 231
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNL 119
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNL 121
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 121
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 126
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNL 110
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 123
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGT--VVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNL 121
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNL 156
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNL 110
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNL 110
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNL 110
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLS 675
L N + +G G +G+V G L VA+K + G + ++ +FL E +
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 676 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGI 723
+ H N++ L G + M+V E M NG+L L F+VI+ G+
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 123
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNL 114
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 632 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691
+G+G +G V K VA+K+ + S + K F+ E++ LSR++H N+V L G C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC-- 71
Query: 692 EGEQMLVYEFMSNGTLRDQLSG 713
LV E+ G+L + L G
Sbjct: 72 LNPVCLVMEYAEGGSLYNVLHG 93
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 632 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691
+G+G +G V K VA+K+ + S + K F+ E++ LSR++H N+V L G C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC-- 70
Query: 692 EGEQMLVYEFMSNGTLRDQLSG 713
LV E+ G+L + L G
Sbjct: 71 LNPVCLVMEYAEGGSLYNVLHG 92
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNL 112
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNL 119
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 624 NNFNSSTQIGQGGYGKVYK----GILPDGT--VVAVKRAQEGSLQGEKE-FLTEIQFLSR 676
N +G G +GKV GI G VAVK +E + E+E ++E++ +++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L H N+V+L+G C G L++E+ G L + L
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 109
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHR 680
+ +IG+G YG V+K D G +VA+K+ E +K L EI+ L +L H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
NLV+L+ + LV+E+ + L +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHE 91
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 632 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 683
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 684 SLVGYCDEE-GEQMLVYEFMSNGTL 707
+L+G C + G M++ EF G L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNL 121
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 109
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 106
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 120
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 112
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 107
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 105
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 107
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 632 IGQGGYGKVYKGILP---DGT--VVAVK--RAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G+G +GKV DGT +VAVK +A G Q + EI L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGP-QHRSGWKQEIDILRTLYHEHIIK 80
Query: 685 LVGYCDEEGEQ--MLVYEFMSNGTLRDQL 711
G C+++GE+ LV E++ G+LRD L
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL 109
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 108
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 116
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 632 IGQGGYGKVYKGILP---DGT--VVAVK--RAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G+G +GKV DGT +VAVK +A G Q + EI L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGP-QHRSGWKQEIDILRTLYHEHIIK 80
Query: 685 LVGYCDEEGEQ--MLVYEFMSNGTLRDQL 711
G C+++GE+ LV E++ G+LRD L
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL 109
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLD 106
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 119
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 107
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 168
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ E+ S G LR+ L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 81
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 115
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQG+ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L + ++ V RH
Sbjct: 77 RLRYFFYSSGEKK--DEVYLNLVLDYVPATVYRVARH 111
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 626 FNSSTQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRL 677
FN S +GQG + K++KG+ + T V +K + + F +S+L
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
H++LV G C E +LV EF+ G+L
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSL 99
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 99
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 617 GEMAL----ATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKE 666
G MAL F +G G +G VYKG+ +P+G VA+K +E S + KE
Sbjct: 1 GAMALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 60
Query: 667 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
L E ++ + + ++ L+G C Q L+ + M G L D
Sbjct: 61 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 102
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 624 NNFNSSTQIGQGGYGKV-----YKGILPDGTV-VAVKRAQEGSLQGEKE-FLTEIQFLSR 676
N + +G G +GKV Y I D + VAVK + + E+E ++E++ LS
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L +H N+V+L+G C G +++ E+ G L + L
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 626 FNSSTQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRL 677
FN S +GQG + K++KG+ + T V +K + + F +S+L
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
H++LV G C E +LV EF+ G+L
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSL 99
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 107
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 105
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLVGYC 689
++G G +GKVYK + +V+A + + + E E ++ EI L+ H N+V L+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 690 DEEGEQMLVYEFMSNGTL 707
E ++ EF + G +
Sbjct: 104 YYENNLWILIEFCAGGAV 121
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLVGYC 689
++G G +GKVYK + +V+A + + + E E ++ EI L+ H N+V L+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 690 DEEGEQMLVYEFMSNGTL 707
E ++ EF + G +
Sbjct: 104 YYENNLWILIEFCAGGAV 121
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLVGYC 689
++G G +GKVYK + +V+A + + + E E ++ EI L+ H N+V L+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 690 DEEGEQMLVYEFMSNGTL 707
E ++ EF + G +
Sbjct: 104 YYENNLWILIEFCAGGAV 121
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 108
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 108
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 105
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 107
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 244 PASYSNMSKLLKLSLRNCSLQGPMPDLSR-IPNLGYLDLSSNQLNGSIPPG--RLSLNIT 300
PA++ + +L L L C LQ P L R + L YL L N L ++P R N+T
Sbjct: 97 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLT 155
Query: 301 TIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNN 360
+ L N+++ F GL L RL + N ++ P + R L T L N
Sbjct: 156 HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF---RDLGRLMTLYLF--AN 210
Query: 361 NLTNISGSFNIPPNVT--VRLRGNPFCLNTNA-------EQFCGSHSD 399
NL+ + P +RL NP+ + A ++F GS S+
Sbjct: 211 NLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSE 258
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 108
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 77
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 111
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 96
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 130
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLD 105
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 112
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 105
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTV----VAVKRAQEG-SLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G VA+K +E S + KE L E +
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 112
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ + S G LR+ L
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRA 134
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 244 PASYSNMSKLLKLSLRNCSLQGPMPDLSR-IPNLGYLDLSSNQLNGSIPPG--RLSLNIT 300
PA++ + +L L L C LQ P L R + L YL L N L ++P R N+T
Sbjct: 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLT 156
Query: 301 TIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNN 360
+ L N+++ F GL L RL + N ++ P + R L T L N
Sbjct: 157 HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF---RDLGRLMTLYLF--AN 211
Query: 361 NLTNISGSFNIPPNVT--VRLRGNPFCLNTNA-------EQFCGSHSD 399
NL+ + P +RL NP+ + A ++F GS S+
Sbjct: 212 NLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSE 259
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 624 NNFNSSTQIGQGGYGKV-----YKGILPDGTV-VAVKRAQEGSLQGEKE-FLTEIQFLSR 676
N + +G G +GKV Y I D + VAVK + + E+E ++E++ LS
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
L +H N+V+L+G C G +++ E+ G L
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 130
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRL 677
+AT+ + +IG G YG VYK P G VA+K R G + E+ L RL
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 678 ---HHRNLVSLVGYC-----DEEGEQMLVYEFMSN 704
H N+V L+ C D E + LV+E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ 95
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRL 677
+AT+ + +IG G YG VYK P G VA+K R G + E+ L RL
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 678 ---HHRNLVSLVGYC-----DEEGEQMLVYEFMSN 704
H N+V L+ C D E + LV+E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ 95
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 622 ATNNFN--SSTQI-GQGGYGKVYK-GILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL 677
A N+F S T+I G G +G+V+K G +A K + ++ ++E EI +++L
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
H NL+ L + + + +LV E++ G L D++
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRI 177
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRL 677
+AT+ + +IG G YG VYK P G VA+K R G + E+ L RL
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 678 ---HHRNLVSLVGYC-----DEEGEQMLVYEFMSN 704
H N+V L+ C D E + LV+E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ 95
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 624 NNFNSSTQIGQGGYGKV-----YKGILPDGTV-VAVKRAQEGSLQGEKE-FLTEIQFLSR 676
N + +G G +GKV Y I D + VAVK + + E+E ++E++ LS
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
L +H N+V+L+G C G +++ E+ G L
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 132
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 624 NNFNSSTQIGQGGYGKV-----YKGILPDGTV-VAVKRAQEGSLQGEKE-FLTEIQFLSR 676
N + +G G +GKV Y I D + VAVK + + E+E ++E++ LS
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L +H N+V+L+G C G +++ E+ G L + L
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQG+ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 77 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 111
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 624 NNFNSSTQIGQGGYGKV-----YKGILPDGTV-VAVKRAQEGSLQGEKE-FLTEIQFLSR 676
N + +G G +GKV Y I D + VAVK + + E+E ++E++ LS
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 677 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L +H N+V+L+G C G +++ E+ G L + L
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQG+ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 77 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 111
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 632 IGQGGYGKVYKGILP--DGT--VVAVKRAQ-EGSLQGE-KEFLTEIQFLSRLHHRNLVSL 685
+G+G +G V +G L DGT VAVK + + S Q E +EFL+E + H N++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 686 VGYCDEEGEQ-----MLVYEFMSNGTLRDQL 711
+G C E Q M++ FM G L L
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 632 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 681
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
+++L+G C ++G ++ + S G LR+ L
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRA 134
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 21/119 (17%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
+ +IG+G YG V+K +VA+KR + L + E L EI L L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR---LDDDDEGVPSSALREICLLKEL 58
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFM----------SNGTLRDQL--SGIFSVIRHSGIC 724
H+N+V L + + LV+EF NG L ++ S +F +++ G C
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 21/119 (17%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 677
+ +IG+G YG V+K +VA+KR + L + E L EI L L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR---LDDDDEGVPSSALREICLLKEL 58
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFM----------SNGTLRDQL--SGIFSVIRHSGIC 724
H+N+V L + + LV+EF NG L ++ S +F +++ G C
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQ 672
G+ A +F +G+G +G VY ++A+K +AQ E + E++
Sbjct: 1 GKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 673 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
S L H N++ L GY + L+ E+ GT+ +L +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 612 RSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEK-E 666
RSFT + + + IG G G+V G L VA+K + G + ++ +
Sbjct: 40 RSFT---REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD 96
Query: 667 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGI 723
FL+E + + H N++ L G M+V E+M NG+L L G F++++ G+
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQ 672
G+ A +F +G+G +G VY ++A+K +AQ E + E++
Sbjct: 1 GKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 673 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
S L H N++ L GY + L+ E+ GT+ +L +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 612 RSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEK-E 666
RSFT + + + IG G G+V G L VA+K + G + ++ +
Sbjct: 40 RSFT---REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD 96
Query: 667 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL---SGIFSVIRHSGI 723
FL+E + + H N++ L G M+V E+M NG+L L G F++++ G+
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 632 IGQGGYGKVYKGILP----DGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLV 686
+G+G +G+VY+G+ + VAVK + + +L +++F++E + L H ++V L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 687 GYCDEE 692
G +EE
Sbjct: 76 GIIEEE 81
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSR 676
+ + +IGQG +G+V+K G VA+K+ ++ EKE L EI+ L
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 72
Query: 677 LHHRNLVSLVGYCDE--------EGEQMLVYEFMSNGTLRDQLSGIFS 716
L H N+V+L+ C +G LV++F + L+G+ S
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-----DLAGLLS 115
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 601 SSKTSIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRA 656
S + ++ G F A+ ++ + +G+G +G+V K + V + +
Sbjct: 9 SGRENLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 68
Query: 657 QEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
Q ++ L E+Q L +L H N++ L + +++G LV E + G L D++
Sbjct: 69 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 123
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRA-----QEGSLQGEKEFLTEIQFL 674
L F +G G +G VYKG+ +P+G V + A + S + KE L E +
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
+ + + ++ L+G C Q L+ + M G L D
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 139
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 632 IGQGGYGKVYKGILP----DGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLV 686
+G+G +G+VY+G+ + VAVK + + +L +++F++E + L H ++V L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 687 GYCDEE 692
G +EE
Sbjct: 92 GIIEEE 97
>pdb|1DCE|A Chain A, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
pdb|1DCE|C Chain C, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
Length = 567
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 238 FEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL 297
E + + Y+++ ++L L+ ++ ++ + L ++ + +LDLS N+L +PP +L
Sbjct: 431 LENSVLKMEYADV-RVLHLAHKDLTV---LCHLEQLLLVTHLDLSHNRLRA-LPPALAAL 485
Query: 298 N-ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILD 356
+ ++ S+N L + LPRLQ L + NN L S ++I ++ +L+
Sbjct: 486 RCLEVLQASDNALENV--DGVANLPRLQELLLCNNRLQQS--AAI--QPLVSCPRLVLLN 539
Query: 357 FQNNNLTNISG 367
Q N+L G
Sbjct: 540 LQGNSLCQEEG 550
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 631 QIGQGGYGKVYKGI-LPDGTVVAVKR---AQEGSLQGEKEFLTEIQFLSRLH-HRNLVSL 685
++G+G YG V+K I G VVAVK+ A + S ++ F EI L+ L H N+V+L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNL 74
Query: 686 VGY--CDEEGEQMLVYEFMS 703
+ D + + LV+++M
Sbjct: 75 LNVLRADNDRDVYLVFDYME 94
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSR 676
+ + +IGQG +G+V+K G VA+K+ ++ EKE L EI+ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 677 LHHRNLVSLVGYCDE--------EGEQMLVYEFMSNGTLRDQLSGIFS 716
L H N+V+L+ C +G LV++F + L+G+ S
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-----DLAGLLS 116
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 632 IGQGGYGKVYKGILP----DGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLV 686
+G+G +G+VY+G+ + VAVK + + +L +++F++E + L H ++V L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 687 GYCDEE 692
G +EE
Sbjct: 80 GIIEEE 85
>pdb|1LTX|A Chain A, Structure Of Rab Escort Protein-1 In Complex With Rab
Geranylgeranyl Transferase And Isoprenoid
Length = 567
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 238 FEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL 297
E + + Y+++ ++L L+ ++ ++ + L ++ + +LDLS N+L +PP +L
Sbjct: 431 LENSVLKMEYADV-RVLHLAHKDLTV---LCHLEQLLLVTHLDLSHNRLRA-LPPALAAL 485
Query: 298 N-ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILD 356
+ ++ S+N L + LPRLQ L + NN L S ++I ++ +L+
Sbjct: 486 RCLEVLQASDNALENV--DGVANLPRLQELLLCNNRLQQS--AAI--QPLVSCPRLVLLN 539
Query: 357 FQNNNLTNISG 367
Q N+L G
Sbjct: 540 LQGNSLCQEEG 550
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSR 676
+ + +IGQG +G+V+K G VA+K+ ++ EKE L EI+ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 677 LHHRNLVSLVGYCDE--------EGEQMLVYEFMSNGTLRDQLSGIFS 716
L H N+V+L+ C +G LV++F + L+G+ S
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-----DLAGLLS 116
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRA-QEGSLQGEKEFLTEIQFLSRLHHRNLV 683
+ ++G GG+G V + I D G VA+K+ QE S + + + EIQ + +L+H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 684 SLVGYCDEEGEQ--------MLVYEFMSNGTLRDQL 711
S D G Q +L E+ G LR L
Sbjct: 77 SAREVPD--GLQKLAPNDLPLLAMEYCEGGDLRKYL 110
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRA-QEGSLQGEKEFLTEIQFLSRLHHRNLV 683
+ ++G GG+G V + I D G VA+K+ QE S + + + EIQ + +L+H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 684 SLVGYCDEEGEQ--------MLVYEFMSNGTLRDQL 711
S D G Q +L E+ G LR L
Sbjct: 76 SAREVPD--GLQKLAPNDLPLLAMEYCEGGDLRKYL 109
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKG--ILPDGTVVAVKRA-----QEGSLQGEKEFLTEIQFL 674
A + +IG+G YGKV+K + G VA+KR +EG + ++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 675 SRLHHRNLVSLVGYC-----DEEGEQMLVYEFMSN 704
H N+V L C D E + LV+E +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ 103
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSR 676
+ + +IGQG +G+V+K G VA+K+ ++ EKE L EI+ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 677 LHHRNLVSLVGYC 689
L H N+V+L+ C
Sbjct: 74 LKHENVVNLIEIC 86
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 84
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 85 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 119
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 89
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 90 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 124
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 95
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 96 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 130
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 77 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 111
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 77
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 78 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 112
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 631 QIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
++G G +G V++ + G V K + EI +++LHH L++L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 690 DEEGEQMLVYEFMSNGTLRDQLSG 713
+++ E +L+ EF+S G L D+++
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAA 141
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 89 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 123
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 81
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 82 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 116
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 77 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 111
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQ 672
G A +F +G+G +G VY ++A+K +AQ E + E++
Sbjct: 4 GSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 673 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
S L H N++ L GY + L+ E+ GT+ +L +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 104
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 105 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 139
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 89 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 123
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 77 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 111
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ V N L ++ V RH
Sbjct: 77 RLRYFFYSSGEKKDVVYL--NLVLDYVPETVYRVARH 111
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKG--ILPDGTVVAVKRA-----QEGSLQGEKEFLTEIQFL 674
A + +IG+G YGKV+K + G VA+KR +EG + ++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 675 SRLHHRNLVSLVGYC-----DEEGEQMLVYEFMSN 704
H N+V L C D E + LV+E +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ 103
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 111 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 145
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 620 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLT-----EIQF 673
++AT+ + +IG G YG VYK P G VA+K + + G L E+
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 674 LSRL---HHRNLVSLVGYC-----DEEGEQMLVYEFMSN 704
L RL H N+V L+ C D E + LV+E +
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ 103
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 624 NNFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRN 681
+++ IG G V P VA+KR E E L EIQ +S+ HH N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH-SGI 723
+VS + E LV + +S G++ D + I + H SG+
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 112
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 111 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 145
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY + ++A+K +AQ E + E++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL 102
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKG--ILPDGTVVAVKRA-----QEGSLQGEKEFLTEIQFL 674
A + +IG+G YGKV+K + G VA+KR +EG + ++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 675 SRLHHRNLVSLVGYC-----DEEGEQMLVYEFMSN 704
H N+V L C D E + LV+E +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ 103
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 601 SSKTSIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS 660
K I+ G R +Y + + ST+IG G +G VYKG V + + + +
Sbjct: 14 QEKNKIRPRGQRDSSY-YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPT 72
Query: 661 LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692
+ + F E+ L + H N++ +GY ++
Sbjct: 73 PEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD 104
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 80
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 81 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 115
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 112
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 113 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 147
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 624 NNFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRN 681
+++ IG G V P VA+KR E E L EIQ +S+ HH N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH-SGI 723
+VS + E LV + +S G++ D + I + H SG+
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 117
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 114
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 115 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 149
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQ 672
G A +F +G+G +G VY ++A+K +AQ E + E++
Sbjct: 1 GPRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 673 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
S L H N++ L GY + L+ E+ GT+ +L +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQ 672
G A +F +G+G +G VY ++A+K +AQ E + E++
Sbjct: 4 GSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 673 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
S L H N++ L GY + L+ E+ GT+ +L +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQ 672
G A +F +G+G +G VY ++A+K +AQ E + E++
Sbjct: 1 GPRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 673 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
S L H N++ L GY + L+ E+ GT+ +L +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 155
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRH 720
L + GE+ E N L ++ V RH
Sbjct: 156 RLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARH 190
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 614 FTYGEMALATNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLT 669
F A+ ++ + +G+G +G+V K + V + + Q ++ L
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 670 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
E+Q L +L H N++ L + +++G LV E + G L D++
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 117
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDG----TVVAVKRAQEG-SLQGEKEFLTEIQFL 674
L +G G +G VYKGI +PDG VA+K +E S + KE L E +
Sbjct: 14 LKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 675 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ + + L+G C Q LV + M G L D +
Sbjct: 74 AGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHV 109
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 18/168 (10%)
Query: 244 PASYSNMSKLLKLSLRNCSLQGPMPDLSR-IPNLGYLDLSSNQLNGSIPPG--RLSLNIT 300
P ++ + L L L C LQ P L R + L YL L N L ++P R N+T
Sbjct: 97 PTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ-ALPDNTFRDLGNLT 155
Query: 301 TIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNN 360
+ L N++ F GL L RL + N ++ P + R L T L N
Sbjct: 156 HLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAF---RDLGRLMTLYLF--AN 210
Query: 361 NLTNISGSFNIPPNVT--VRLRGNPFCLNTNA-------EQFCGSHSD 399
NL+ + +P +RL NP+ + A ++F GS S+
Sbjct: 211 NLSMLPAEVLVPLRSLQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSE 258
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 153 LPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPE-LSRLPSLVHMLLDN 211
L LDR+ + QN+++ P +F +L + ++ N++S +P E L L SL ++ L++
Sbjct: 175 LHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-MLPAEVLVPLRSLQYLRLND 233
Query: 212 N 212
N
Sbjct: 234 N 234
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQE---GSLQGEKEFLTEIQFLSRL- 677
T F+ +IG G +G V+K + DG + A+KR+++ GS+ E+ L E+ + L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLG 66
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVI 718
H ++V E+ ++ E+ + G+L D +S + ++
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIM 107
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQE---GSLQGEKEFLTEIQFLSRL- 677
T F+ +IG G +G V+K + DG + A+KR+++ GS+ E+ L E+ + L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLG 66
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVI 718
H ++V E+ ++ E+ + G+L D +S + ++
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIM 107
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQE---GSLQGEKEFLTEIQFLSRL- 677
T F+ +IG G +G V+K + DG + A+KR+++ GS+ E+ L E+ + L
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLG 64
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVI 718
H ++V E+ ++ E+ + G+L D +S + ++
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIM 105
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLV 683
F+ ++G+G YG VYK I + G +VA+K+ E LQ E + EI + + ++V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ---EIIKEISIMQQCDSPHVV 87
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRD 709
G + + +V E+ G++ D
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSD 113
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQE---GSLQGEKEFLTEIQFLSRL- 677
T F+ +IG G +G V+K + DG + A+KR+++ GS+ E+ L E+ + L
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLG 68
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVI 718
H ++V E+ ++ E+ + G+L D +S + ++
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIM 109
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVV-AVKRAQEGSL-----QGEKEF 667
F G + ++ IGQG YG V I + A+K + + + +
Sbjct: 16 FQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERI 75
Query: 668 LTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
TE++ + +LHH N+ L ++E LV E G L D+L+
Sbjct: 76 KTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN 120
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 247 YSNMSKLLKLSLRNCSLQGPMPD--LSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTI 302
+ ++ L +L L LQ +PD ++ NL YL+L+ NQL S+P G N+T +
Sbjct: 105 FDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTEL 162
Query: 303 KLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT 346
LS N+L F L +L+ L + N L S+P ++ T
Sbjct: 163 DLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLT 205
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 262 SLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321
S+QG + +PN+ YL L N+L+ L+ N+T + L+ N+L F L
Sbjct: 55 SVQG----IQYLPNVRYLALGGNKLHDISALKELT-NLTYLILTGNQLQSLPNGVFDKLT 109
Query: 322 RLQRLFIANNSLSGSIPSSIWQSRT 346
L+ L + N L S+P ++ T
Sbjct: 110 NLKELVLVENQLQ-SLPDGVFDKLT 133
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 101
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 632 IGQGGYGKVYKGIL-PDG----TVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
+G+G +GKV P+G VAVK + E + EI+ L L+H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQL 711
G C E+G L+ EF+ +G+L++ L
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL 116
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 106
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 247 YSNMSKLLKLSLRNCSLQGPMPD--LSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTI 302
+ ++ L +L L LQ +PD ++ NL YL L NQL S+P G N+T +
Sbjct: 105 FDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRL 162
Query: 303 KLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT 346
L NN+L F L +L++L + +N L S+P ++ T
Sbjct: 163 DLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLK-SVPDGVFDRLT 205
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 153 LPKLDRIQIDQNYISGSLPKS-FANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 211
L L R+ +D N + SLP+ F L + + +N+N + RL SL H+ L N
Sbjct: 156 LTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLN 214
Query: 212 N 212
N
Sbjct: 215 N 215
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 262 SLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321
S+QG + +PN+ YL L N+L+ L+ N+T + L+ N+L F L
Sbjct: 55 SVQG----IQYLPNVRYLALGGNKLHDISALKELT-NLTYLILTGNQLQSLPNGVFDKLT 109
Query: 322 RLQRLFIANNSLSGSIPSSIWQSRT 346
L+ L + N L S+P ++ T
Sbjct: 110 NLKELVLVENQLQ-SLPDGVFDKLT 133
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 104
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 632 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
+G+G +G+ K + G V+ +K + ++ FL E++ + L H N++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 691 EEGEQMLVYEFMSNGTLR 708
++ + E++ GTLR
Sbjct: 78 KDKRLNFITEYIKGGTLR 95
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 632 IGQGGYGKVYKGIL-PDG----TVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
+G+G +GKV P+G VAVK + E + EI+ L L+H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 686 VGYCDEEGEQ--MLVYEFMSNGTLRDQL 711
G C E+G L+ EF+ +G+L++ L
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL 104
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 614 FTYGEMALATNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLT 669
F A+ ++ + +G+G +G+V K + V + + Q ++ L
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 98
Query: 670 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
E+Q L +L H N++ L + +++G LV E + G L D++
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 140
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 104
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 614 FTYGEMALATNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLT 669
F A+ ++ + +G+G +G+V K + V + + Q ++ L
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 670 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
E+Q L +L H N+ L + +++G LV E + G L D++
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI 117
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 614 FTYGEMALATNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLT 669
F A+ ++ + +G+G +G+V K + V + + Q ++ L
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 99
Query: 670 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
E+Q L +L H N++ L + +++G LV E + G L D++
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 141
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 632 IGQ-GGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLVGYC 689
IG+ G +GKVYK + +V+A + + + E E ++ EI L+ H N+V L+
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 690 DEEGEQMLVYEFMSNGTL 707
E ++ EF + G +
Sbjct: 77 YYENNLWILIEFCAGGAV 94
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 119
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 632 IGQGGYGKVYKGILP---DGT--VVAVK--RAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 684
+G+G +GKV DGT +VAVK +A G Q + EI L L+H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGP-QHRSGWKQEIDILRTLYHEHIIK 97
Query: 685 LVGYCDEEGEQ--MLVYEFMSNGTLRDQL 711
G C++ G LV E++ G+LRD L
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYL 126
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 632 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 690
+G G YG+VYKG +A + + + E+E EI L + HHRN+ + G
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 691 E------EGEQMLVYEFMSNGTLRD 709
+ + + LV EF G++ D
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTD 116
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ GT+ +L +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 99
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ G + +L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL 107
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 622 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 677
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
H N++ L GY + L+ E+ G + +L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL 107
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRLH 678
++ +IG+G YG VYK G A+K+ + L+ E E + EI L L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR---LEKEDEGIPSTTIREISILKELK 58
Query: 679 HRNLVSLVGYCDEEGEQMLVYEFMSN 704
H N+V L + +LV+E +
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQ 84
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRLH 678
++ +IG+G YG VYK G A+K+ + L+ E E + EI L L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR---LEKEDEGIPSTTIREISILKELK 58
Query: 679 HRNLVSLVGYCDEEGEQMLVYEFMSN 704
H N+V L + +LV+E +
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQ 84
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRLH 678
++ +IG+G YG VYK G A+K+ + L+ E E + EI L L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR---LEKEDEGIPSTTIREISILKELK 58
Query: 679 HRNLVSLVGYCDEEGEQMLVYEFMSN 704
H N+V L + +LV+E +
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQ 84
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPP---GRLSLN 298
++PAS +N+ L L +RN L P + +P L LDL + PP GR L
Sbjct: 197 SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256
Query: 299 ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 343
+K +N L T+P + L +L++L + +PS I Q
Sbjct: 257 RLILKDCSNLL--TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 169 SLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN-NNLTGYXXXXXXXXXX 227
SLP S ANL + + N+ +S + P + LP L + L L Y
Sbjct: 197 SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPL 255
Query: 228 XXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNL 276
D +N T+P +++L KL LR C +LSR+P+L
Sbjct: 256 KRLILKDCSNL--LTLPLDIHRLTQLEKLDLRGCV------NLSRLPSL 296
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPN-LGYLDLSSNQLNGSIPPGRLSLNIT 300
+PAS +++++L +LS+R C P+L+ +P L D +S + G + L L T
Sbjct: 141 ALPASIASLNRLRELSIRAC------PELTELPEPLASTD-ASGEHQGLVNLQSLRLEWT 193
Query: 301 TIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPS 339
I+ ++P++ + L L+ L I N+ LS P+
Sbjct: 194 GIR--------SLPASIANLQNLKSLKIRNSPLSALGPA 224
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 626 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKR-AQEGSLQGEK--EFLTEIQFLSRLHHRN 681
F+ +IG G +G VY + + VVA+K+ + G EK + + E++FL +L H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 682 LVSLVGYCDEEGEQMLVYEF 701
+ G E LV E+
Sbjct: 116 TIQYRGCYLREHTAWLVMEY 135
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 626 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKR-AQEGSLQGEK--EFLTEIQFLSRLHHRN 681
F+ +IG G +G VY + + VVA+K+ + G EK + + E++FL +L H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 682 LVSLVGYCDEEGEQMLVYEF 701
+ G E LV E+
Sbjct: 77 TIQYRGCYLREHTAWLVMEY 96
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTE--IQFLS 675
E +L +N IG+G YG VYKG L D VAVK S + F+ E I +
Sbjct: 7 EPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVP 62
Query: 676 RLHHRNLVS-LVG----YCDEEGEQMLVYEFMSNGTLRDQLS 712
+ H N+ +VG D E +LV E+ NG+L LS
Sbjct: 63 LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS 104
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
+F IG GG+G+V+K DG +KR + + + E+ E++ L++L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 684 SLVGYCD 690
G D
Sbjct: 68 HYNGCWD 74
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 13/84 (15%)
Query: 632 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLV 683
+G+G YGKV K +L T+ +RA + + GE EIQ L RL H+N++
Sbjct: 13 LGEGSYGKV-KEVLDSETLC--RRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 684 SLVG--YCDEEGEQMLVYEFMSNG 705
LV Y +E+ + +V E+ G
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCG 93
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 621 LATNNFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSR 676
L N+ IG+G + KV + IL G VAVK + L ++ E++ +
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 62
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L+H N+V L + E LV E+ S G + D L
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 97
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 624 NNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 679
++F +G+G +G VY +VA+K ++Q E + EI+ + LHH
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 680 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N++ L Y + L+ E+ G L +L
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQ 115
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 631 QIGQGGYGKVYKGI--LPDGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVG 687
++G+G Y VYKG L D +VA+K + +G + E+ L L H N+V+L
Sbjct: 9 KLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 688 YCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIRHSGICFFL 727
E LV+E++ + L+ L ++I + FL
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFL 106
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 614 FTYGEMALATNNFNSSTQ-IGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQGEKEFLTE 670
+ G M + N Q +G+GG+ V +G L DG A+KR Q +E E
Sbjct: 18 YFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQRE 76
Query: 671 IQFLSRLHHRNLVSLVGYCDEE----GEQMLVYEFMSNGTLRDQLS 712
+H N++ LV YC E E L+ F GTL +++
Sbjct: 77 ADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIE 122
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Query: 621 LATNNFNSSTQIGQGGYGKVY-------KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQF 673
++F+ +G+G +G VY K I+ + + +EG E + EI+
Sbjct: 12 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV---EHQLRREIEI 68
Query: 674 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
S L H N++ + Y + L+ EF G L +L
Sbjct: 69 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ 107
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Query: 621 LATNNFNSSTQIGQGGYGKVY-------KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQF 673
++F+ +G+G +G VY K I+ + + +EG E + EI+
Sbjct: 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV---EHQLRREIEI 67
Query: 674 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
S L H N++ + Y + L+ EF G L +L
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ 106
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVK----------RAQEGSLQGEKEFLTEIQFLSRLHHR 680
++G GG VY L + T++ +K R +E +L K F E+ S+L H+
Sbjct: 18 KLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETL---KRFEREVHNSSQLSHQ 71
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+VS++ +E+ LV E++ TL + +
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE 103
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 267 MPDL-SRIPNLGYLDLSSNQLNGSIPPGRLSLN-ITTIKLSNNKLTGTIPSNFSGLPRLQ 324
+PD+ + + NL +LDLS QL P SL+ + + +++N+L F L LQ
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQ 521
Query: 325 RLFIANNSLSGSIPSSIWQSRTLN 348
++++ N S P + SR LN
Sbjct: 522 KIWLHTNPWDCSCPRIDYLSRWLN 545
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 683
+F IG GG+G+V+K DG ++R + + + E+ E++ L++L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIV 68
Query: 684 SLVGYCD 690
G D
Sbjct: 69 HYNGCWD 75
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 75/187 (40%), Gaps = 17/187 (9%)
Query: 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 209
L L L+R+ I N +S A L NN IS P L L +L + L
Sbjct: 172 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 227
Query: 210 DNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKL--LKLSLRNCSLQGPM 267
+ N L NN A S ++KL LKL S P+
Sbjct: 228 NGNQLKDIGTLASLTNLTDLDLA--NNQISNL---APLSGLTKLTELKLGANQISNISPL 282
Query: 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLF 327
L+ + NL +L+ NQL P L N+T + L N ++ P S L +LQRLF
Sbjct: 283 AGLTALTNL---ELNENQLEDISPISNLK-NLTYLTLYFNNISDISP--VSSLTKLQRLF 336
Query: 328 IANNSLS 334
ANN +S
Sbjct: 337 FANNKVS 343
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 624 NNFNSSTQIGQGGYGKVY-------KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 676
+F+ +G+G +G VY K IL + + + G E + E++ S
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV---EHQLRREVEIQSH 68
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
L H N++ L GY + L+ E+ GT+ +L +
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 106
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 624 NNFNSSTQIGQGGYGKVY-------KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 676
+F+ +G+G +G VY K IL + + + G E + E++ S
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV---EHQLRREVEIQSH 68
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714
L H N++ L GY + L+ E+ GT+ +L +
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 106
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Query: 621 LATNNFNSSTQIGQGGYGKVY-------KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQF 673
++F+ +G+G +G VY K I+ + + +EG E + EI+
Sbjct: 11 FTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV---EHQLRREIEI 67
Query: 674 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
S L H N++ + Y + L+ EF G L +L
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ 106
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 625 NFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHR 680
N+ IG+G + KV + IL G VAVK + L ++ E++ + L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
N+V L + E LV E+ S G + D L
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 624 NNFNSSTQIGQGGYGKVY---KGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQ--FLSRL 677
++F +GQG +GKV+ K PD G + A+K ++ +L+ T+++ L+ +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
+H +V L EG+ L+ +F+ G L +LS
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLS 122
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 625 NFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHR 680
N+ IG+G + KV + IL G VAVK + L ++ E++ + L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
N+V L + E LV E+ S G + D L
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 247 YSNMSKLLKLSLRNCSLQG-PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIK 303
+ ++++L KL L L+ P R+ L L L++NQL SIP G N+ T+
Sbjct: 103 FDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLS 161
Query: 304 LSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNL 362
LS N+L F L +LQ + + N S +++ S+ + + D NL
Sbjct: 162 LSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCETLYLSQWIRENSNKVKDGTGQNL 220
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 625 NFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHR 680
N+ IG+G + KV + IL G VAVK + L ++ E++ + L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
N+V L + E LV E+ S G + D L
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 270 LSRIPNLGYLDLSSNQLNGS----IPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQR 325
L ++ NL LDLS N + S + LS ++ T+ LS+N+ G F P+L+
Sbjct: 343 LEKLGNLQTLDLSHNDIEASDCCSLQLKNLS-HLQTLNLSHNEPLGLQSQAFKECPQLEL 401
Query: 326 LFIANNSLSGSIPSSIWQS----RTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRG 381
L +A L + P S +Q+ + LN T F LD N +L ++G +P + L+G
Sbjct: 402 LDLAFTRLHINAPQSPFQNLHFLQVLNLTYCF-LDTSNQHL--LAG---LPVLRHLNLKG 455
Query: 382 NPF 384
N F
Sbjct: 456 NHF 458
>pdb|4B4T|K Chain K, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
Length = 428
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 292 PGRLSLNITTIKLSNNK----LTGTIPSNFSGLPR--LQRLFIANNSLSGSIPSSIWQSR 345
PGRL I L + + + GTI S S P L L I N+SLSG++ ++I Q
Sbjct: 331 PGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEA 390
Query: 346 TLNAT 350
L A
Sbjct: 391 GLRAV 395
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 274 PNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 331
P+ LDL +N++ I G N+ T+ L NNK++ P F+ L +L+RL+++ N
Sbjct: 52 PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110
Query: 332 SLS---GSIPSSIWQSRT 346
L +P ++ + R
Sbjct: 111 QLKELPEKMPKTLQELRV 128
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 274 PNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 331
P+ LDL +N++ I G N+ T+ L NNK++ P F+ L +L+RL+++ N
Sbjct: 52 PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110
Query: 332 SLS---GSIPSSIWQSRT 346
L +P ++ + R
Sbjct: 111 QLKELPEKMPKTLQELRV 128
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 275 NLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNS 332
NL L L SNQL G++P G +T + L N+LT + F L L+ LF+ N
Sbjct: 65 NLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNK 123
Query: 333 LSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS-GSFNIPPNVT-VRLRGNPF 384
L+ +P I R + T L N L +I G+F+ ++T L GNP+
Sbjct: 124 LT-ELPRGI--ERLTHLTH---LALDQNQLKSIPHGAFDRLSSLTHAYLFGNPW 171
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 19/142 (13%)
Query: 587 AHMKN-YHAISRRRHSSKTSIKIDGVRSFTYGEMALATNNFNSSTQ-------------- 631
+HM+N Y +R R + K G RS ++ F ++ Q
Sbjct: 19 SHMENLYFQGARARQENGMPEKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDN 78
Query: 632 ---IGQGGYGKV-YKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 687
IG+G G V + G +VAVK+ Q + E+ + H N+V +
Sbjct: 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 688 YCDEEGEQMLVYEFMSNGTLRD 709
E +V EF+ G L D
Sbjct: 139 SYLVGDELWVVMEFLEGGALTD 160
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 632 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRLHHRNLVSL 685
+G+G + VYK + +VA+K+ + G K+ L EI+ L L H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 686 VGYCDEEGEQMLVYEFMSN 704
+ + LV++FM
Sbjct: 78 LDAFGHKSNISLVFDFMET 96
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 273 IPNLGYLDLSSNQLNGSIPPGRLSLN-ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 331
+PNL YLDLSSN L+ L + + L NN + + F + +LQ+L+++ N
Sbjct: 87 VPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQN 146
Query: 332 SLS 334
+S
Sbjct: 147 QIS 149
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 279 LDLSSNQLNGSI----PPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334
L+LSSN L GS+ PP + + L NN++ +IP + + L LQ L +A+N L
Sbjct: 433 LNLSSNMLTGSVFRCLPP-----KVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK 486
Query: 335 GSIPSSIWQSRT 346
S+P ++ T
Sbjct: 487 -SVPDGVFDRLT 497
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKL 304
A SN+ ++L L L + P+ L+ NL YL + +NQ+N P LS +TT++
Sbjct: 132 AGLSNL-QVLYLDLNQITNISPLAGLT---NLQYLSIGNNQVNDLTPLANLS-KLTTLRA 186
Query: 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP 338
+NK++ P + LP L + + +N +S P
Sbjct: 187 DDNKISDISP--LASLPNLIEVHLKDNQISDVSP 218
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 632 IGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
+G+G YG VY G L + +A+K E + + EI L H+N+V +G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 691 EEGEQMLVYEFMSNGTL 707
E G + E + G+L
Sbjct: 90 ENGFIKIFMEQVPGGSL 106
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Query: 632 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGE-----------KEFLTEIQFLSRLHHR 680
I G YG V G+ +G VA+KR G K L EI+ L+ HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 681 NLVSL 685
N++ L
Sbjct: 90 NILGL 94
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 625 NFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHR 680
N+ IG+G + KV + +L G VAVK + L ++ E++ + L+H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
N+V L + E LV E+ S G + D L
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL 105
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Query: 632 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGE-----------KEFLTEIQFLSRLHHR 680
I G YG V G+ +G VA+KR G K L EI+ L+ HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 681 NLVSL 685
N++ L
Sbjct: 90 NILGL 94
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 632 IGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
+G+G YG VY G L + +A+K E + + EI L H+N+V +G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 691 EEGEQMLVYEFMSNGTL 707
E G + E + G+L
Sbjct: 76 ENGFIKIFMEQVPGGSL 92
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 273 IPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 331
+ +L L+L+ N++N L N+ + LS N L SNF GLP++ + + N
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348
Query: 332 SLSGSIPSSIWQSRTLNATETF-ILDFQNNNLTNISGSFNIPPNVTVRLRGN 382
+ +I Q +T E LD ++N LT I IP + L GN
Sbjct: 349 HI------AIIQDQTFKFLEKLQTLDLRDNALTTIHF---IPSIPDIFLSGN 391
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 625 NFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHR 680
N+ IG+G + KV + IL G VAV+ + L ++ E++ + L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
N+V L + E LV E+ S G + D L
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 292 PGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNA 349
P L IT I+L N + P FS +L+R+ ++NN +S P + R+LN+
Sbjct: 27 PTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNS 84
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 156 LDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT 215
+ I+++QN I P +F+ K R ++NN IS P L SL ++L N +T
Sbjct: 34 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 290 IPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 343
IPPG S + I LSNN+++ P F GL L L + N ++ +P S+++
Sbjct: 47 IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFE 101
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 75/187 (40%), Gaps = 17/187 (9%)
Query: 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 209
L L L+R+ I N +S A L NN IS P L L +L + L
Sbjct: 168 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 223
Query: 210 DNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKL--LKLSLRNCSLQGPM 267
+ N L NN A S ++KL LKL S P+
Sbjct: 224 NGNQLKDIGTLASLTNLTDLDLA--NNQISNL---APLSGLTKLTELKLGANQISNISPL 278
Query: 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLF 327
L+ + NL +L+ NQL P L N+T + L N ++ P S L +LQRLF
Sbjct: 279 AGLTALTNL---ELNENQLEDISPISNLK-NLTYLTLYFNNISDISP--VSSLTKLQRLF 332
Query: 328 IANNSLS 334
+NN +S
Sbjct: 333 FSNNKVS 339
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 292 PGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNA 349
P L IT I+L N + P FS +L+R+ ++NN +S P + R+LN+
Sbjct: 27 PTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNS 84
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 156 LDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT 215
+ I+++QN I P +F+ K R ++NN IS P L SL ++L N +T
Sbjct: 34 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 290 IPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 343
IPPG S + I LSNN+++ P F GL L L + N ++ +P S+++
Sbjct: 47 IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFE 101
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 625 NFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHR 680
N+ IG+G + KV + IL G VAV+ + L ++ E++ + L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
N+V L + E LV E+ S G + D L
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 75/187 (40%), Gaps = 17/187 (9%)
Query: 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 209
L L L+R+ I N +S A L NN IS P L L +L + L
Sbjct: 169 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 224
Query: 210 DNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKL--LKLSLRNCSLQGPM 267
+ N L NN A S ++KL LKL S P+
Sbjct: 225 NGNQLKDIGTLASLTNLTDLDLA--NNQISNL---APLSGLTKLTELKLGANQISNISPL 279
Query: 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLF 327
L+ + NL +L+ NQL P L N+T + L N ++ P S L +LQRLF
Sbjct: 280 AGLTALTNL---ELNENQLEDISPISNLK-NLTYLTLYFNNISDISP--VSSLTKLQRLF 333
Query: 328 IANNSLS 334
+NN +S
Sbjct: 334 FSNNKVS 340
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 632 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 686
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQLS 712
G E ++ E + G LR L
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQ 102
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 632 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 686
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQLS 712
G E ++ E + G LR L
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQ 102
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 632 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 686
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQLS 712
G E ++ E + G LR L
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQ 102
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRLHH 679
T+ + ++G+G + V + + +P G A K ++ S + ++ E + L H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 680 RNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
N+V L EEG LV++ ++ G L
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL 90
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 632 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 686
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQLS 712
G E ++ E + G LR L
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQ 102
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 632 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 686
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQLS 712
G E ++ E + G LR L
Sbjct: 106 GVIT-ENPVWIIMELCTLGELRSFLQ 130
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 632 IGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRNLVSLVGYC 689
IG GG+ KV + G +VA+K + +L + TEI+ L L H+++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 690 DEEGEQMLVYEFMSNGTLRD 709
+ + +V E+ G L D
Sbjct: 78 ETANKIFMVLEYCPGGELFD 97
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRLHH 679
T+ + ++G+G + V + + +P G A K ++ S + ++ E + L H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 680 RNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
N+V L EEG LV++ ++ G L
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL 90
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 247 YSNMSKLLKLSLRNCSLQG-PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIK 303
+ ++++L KL L L+ P R+ L L L++NQL SIP G N+ T+
Sbjct: 103 FDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLS 161
Query: 304 LSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNL 362
LS N+L F L +LQ + + N S ++ S+ + + D NL
Sbjct: 162 LSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVKDGTGQNL 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 625 NFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHR 680
N+ IG+G + KV + IL G VAVK + L ++ E++ L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
N+V L + E LV E+ S G + D L
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYL 104
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 42/202 (20%)
Query: 173 SFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYXXXXXXXXXXXXXXX 232
+FA + + +M N+I P +P L ++L+ N+L+
Sbjct: 88 AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147
Query: 233 XDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPP 292
NNN E ++ + L L L + L DLS IP+L + ++S N L+ P
Sbjct: 148 MSNNNLERIE-DDTFQATTSLQNLQLSSNRLTHV--DLSLIPSLFHANVSYNLLSTLAIP 204
Query: 293 -----------------GRLSLNITTIKLSNNKLTGT----------------------I 313
G +++ +T +KL +N LT T +
Sbjct: 205 IAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIM 264
Query: 314 PSNFSGLPRLQRLFIANNSLSG 335
F + RL+RL+I+NN L
Sbjct: 265 YHPFVKMQRLERLYISNNRLVA 286
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 54/144 (37%), Gaps = 35/144 (24%)
Query: 273 IPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 330
+P L L L N L S+P G + +TT+ +SNN L F LQ L +++
Sbjct: 116 VPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSS 174
Query: 331 NSLSGS----IPSSIWQSRTLNATETF----------------------------ILDFQ 358
N L+ IPS + + N T IL Q
Sbjct: 175 NRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQ 234
Query: 359 NNNLTNISGSFNIPPNVTVRLRGN 382
+NNLT+ + N P V V L N
Sbjct: 235 HNNLTDTAWLLNYPGLVEVDLSYN 258
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 632 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 686
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQLS 712
G E ++ E + G LR L
Sbjct: 83 GVIT-ENPVWIIMELCTLGELRSFLQ 107
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 632 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 686
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQLS 712
G E ++ E + G LR L
Sbjct: 75 GVIT-ENPVWIIMELCTLGELRSFLQ 99
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 632 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 686
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQLS 712
G E ++ E + G LR L
Sbjct: 80 GVIT-ENPVWIIMELCTLGELRSFLQ 104
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 153 LPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 212
LP L+ +++ N ++ ++F L+K R + NN I +R+PSL + L
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL 141
Query: 213 NLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSR 272
Y A++ + L L+L C+L+ +P+L+
Sbjct: 142 KRLEYISE------------------------AAFEGLVNLRYLNLGMCNLKD-IPNLTA 176
Query: 273 IPNLGYLDLSSNQLNGSIPPGRLSLNITTIK---LSNNKLTGTIPSNFSGLPRLQRLFIA 329
+ L L+LS N+L+ I PG +T+++ L + ++ + F L L+ L ++
Sbjct: 177 LVRLEELELSGNRLD-LIRPGSFQ-GLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLS 234
Query: 330 NNSLSGSIPSSIW 342
+N+L S+P ++
Sbjct: 235 HNNLM-SLPHDLF 246
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 153 LPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 212
LP L+ +++ N ++ ++F L+K R + NN I +R+PSL + L
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL 141
Query: 213 NLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSR 272
Y A++ + L L+L C+L+ +P+L+
Sbjct: 142 KRLEYISE------------------------AAFEGLVNLRYLNLGMCNLKD-IPNLTA 176
Query: 273 IPNLGYLDLSSNQLNGSIPPGRLSLNITTIK---LSNNKLTGTIPSNFSGLPRLQRLFIA 329
+ L L+LS N+L+ I PG +T+++ L + ++ + F L L+ L ++
Sbjct: 177 LVRLEELELSGNRLD-LIRPGSFQ-GLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLS 234
Query: 330 NNSLSGSIPSSIW 342
+N+L S+P ++
Sbjct: 235 HNNLM-SLPHDLF 246
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685
+ + IG G +G V++ L + VA+K+ LQ ++ E+Q + + H N+V L
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDL 97
Query: 686 VGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ F SNG +D++
Sbjct: 98 KAF------------FYSNGDKKDEV 111
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 632 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 686
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 687 GYCDEEGEQMLVYEFMSNGTLRDQLS 712
G E ++ E + G LR L
Sbjct: 81 GVIT-ENPVWIIMELCTLGELRSFLQ 105
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 632 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 686
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 687 GYCDEEGEQMLVYEFMSNGTLR 708
G E ++ E + G LR
Sbjct: 458 GVIT-ENPVWIIMELCTLGELR 478
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 17/117 (14%)
Query: 281 LSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN---SLSGSI 337
+SS+ L G +P ++ ++L N+LTG P+ F G +Q L + N +S +
Sbjct: 44 ISSDGLFGRLP------HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKM 97
Query: 338 PSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVT-VRLRGNPFCLNTNAEQF 393
+ Q +TLN + N + GSF ++T + L NPF N + F
Sbjct: 98 FLGLHQLKTLNL-------YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF 147
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 632 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 686
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 687 GYCDEEGEQMLVYEFMSNGTLR 708
G E ++ E + G LR
Sbjct: 458 GVIT-ENPVWIIMELCTLGELR 478
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI + L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 26/114 (22%)
Query: 241 TTIP-ASYSNMSKLLKLSLRNCSLQG-PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-- 296
TTIP ++ +SKL +L LRN ++ P +RIP+L LDL + I G
Sbjct: 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGL 184
Query: 297 ----------------------LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 328
+ + + LS N L+ P +F GL LQ+L++
Sbjct: 185 SNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWM 238
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 28/184 (15%)
Query: 153 LPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 212
L L+ +++ N ++ +F L+K + + NN I +R+PSL + L
Sbjct: 111 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 170
Query: 213 NLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSR 272
Y FEG +S L L+L C+L+ +P+L+
Sbjct: 171 KRLSY---------------ISEGAFEG---------LSNLRYLNLAMCNLR-EIPNLTP 205
Query: 273 IPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 330
+ L LDLS N L+ +I PG +++ + + +++ + F L L + +A+
Sbjct: 206 LIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAH 264
Query: 331 NSLS 334
N+L+
Sbjct: 265 NNLT 268
>pdb|1M9S|A Chain A, Crystal Structure Of Internalin B (Inlb), A Listeria
Monocytogenes Virulence Protein Containing Sh3-Like
Domains
Length = 605
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 270 LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 329
L +P L L L +N++ RL+ + T+ L +N+++ +P +GL +LQ L+++
Sbjct: 127 LVHLPQLESLYLGNNKITDITVLSRLT-KLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 183
Query: 330 NNSLS 334
N +S
Sbjct: 184 KNHIS 188
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 631 QIGQGGYGKV-YKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
+IG+G G V + G +VAVK+ Q + E+ + H N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 690 DEEGEQMLVYEFMSNGTLRD 709
E +V EF+ G L D
Sbjct: 87 LVGDELWVVMEFLEGGALTD 106
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 74/187 (39%), Gaps = 17/187 (9%)
Query: 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 209
L L L+R+ I N +S A L NN IS P L L +L + L
Sbjct: 173 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 228
Query: 210 DNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKL--LKLSLRNCSLQGPM 267
+ N L NN A S ++KL LKL S P+
Sbjct: 229 NGNQLKDIGTLASLTNLTDLDLA--NNQISNL---APLSGLTKLTELKLGANQISNISPL 283
Query: 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLF 327
L+ + NL +L+ NQL P L N+T + L N ++ P S L +LQRLF
Sbjct: 284 AGLTALTNL---ELNENQLEDISPISNLK-NLTYLTLYFNNISDISP--VSSLTKLQRLF 337
Query: 328 IANNSLS 334
NN +S
Sbjct: 338 FYNNKVS 344
>pdb|3RCN|A Chain A, Crystal Structure Of Beta-N-Acetylhexosaminidase From
Arthrobacter Aurescens
Length = 543
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 608 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL 661
+ G+ S+ G++AL + +T + + ++ G LPDG +VA R EG +
Sbjct: 340 VSGLHSWFVGQLALHLKHHGRATSV----WDEIGDGGLPDGALVASWRGYEGGI 389
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 632 IGQGGYGKVYKGILPDGTVV--AVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
IG+G +G+V K + GT + A K+ + ++ F EI+ + L H N++ L
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 690 DEEGEQMLVYEFMSNGTLRDQL 711
++ + LV E + G L +++
Sbjct: 76 EDNTDIYLVMELCTGGELFERV 97
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 74/187 (39%), Gaps = 17/187 (9%)
Query: 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 209
L L L+R+ I N +S A L NN IS P L L +L + L
Sbjct: 169 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 224
Query: 210 DNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKL--LKLSLRNCSLQGPM 267
+ N L NN A S ++KL LKL S P+
Sbjct: 225 NGNQLKDIGTLASLTNLTDLDLA--NNQISNL---APLSGLTKLTELKLGANQISNISPL 279
Query: 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLF 327
L+ + NL +L+ NQL P L N+T + L N ++ P S L +LQRLF
Sbjct: 280 AGLTALTNL---ELNENQLEDISPISNLK-NLTYLTLYFNNISDISP--VSSLTKLQRLF 333
Query: 328 IANNSLS 334
NN +S
Sbjct: 334 FYNNKVS 340
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 17 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 35 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 42 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 631 QIGQGGYGKV-YKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
+IG+G G V + G +VAVK+ Q + E+ + H N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 690 DEEGEQMLVYEFMSNGTLRD 709
E +V EF+ G L D
Sbjct: 91 LVGDELWVVMEFLEGGALTD 110
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 632 IGQGGYGKVYKGILPDGTVV--AVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
IG+G +G+V K + GT + A K+ + ++ F EI+ + L H N++ L
Sbjct: 34 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 690 DEEGEQMLVYEFMSNGTLRDQL 711
++ + LV E + G L +++
Sbjct: 93 EDNTDIYLVMELCTGGELFERV 114
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 19 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 74/187 (39%), Gaps = 17/187 (9%)
Query: 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 209
L L L+R+ I N +S A L NN IS P L L +L + L
Sbjct: 168 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 223
Query: 210 DNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKL--LKLSLRNCSLQGPM 267
+ N L NN A S ++KL LKL S P+
Sbjct: 224 NGNQLKDIGTLASLTNLTDLDLA--NNQISNL---APLSGLTKLTELKLGANQISNISPL 278
Query: 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLF 327
L+ + NL +L+ NQL P L N+T + L N ++ P S L +LQRLF
Sbjct: 279 AGLTALTNL---ELNENQLEDISPISNLK-NLTYLTLYFNNISDISP--VSSLTKLQRLF 332
Query: 328 IANNSLS 334
NN +S
Sbjct: 333 FYNNKVS 339
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 631 QIGQGGYGKV-YKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
+IG+G G V + G +VAVK+ Q + E+ + H N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 690 DEEGEQMLVYEFMSNGTLRD 709
E +V EF+ G L D
Sbjct: 96 LVGDELWVVMEFLEGGALTD 115
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 74/187 (39%), Gaps = 17/187 (9%)
Query: 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 209
L L L+R+ I N +S A L NN IS P L L +L + L
Sbjct: 169 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 224
Query: 210 DNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKL--LKLSLRNCSLQGPM 267
+ N L NN A S ++KL LKL S P+
Sbjct: 225 NGNQLKDIGTLASLTNLTDLDLA--NNQISNL---APLSGLTKLTELKLGANQISNISPL 279
Query: 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLF 327
L+ + NL +L+ NQL P L N+T + L N ++ P S L +LQRLF
Sbjct: 280 AGLTALTNL---ELNENQLEDISPISNLK-NLTYLTLYFNNISDISP--VSSLTKLQRLF 333
Query: 328 IANNSLS 334
NN +S
Sbjct: 334 FYNNKVS 340
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 631 QIGQGGYGKV-YKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
+IG+G G V + G +VAVK+ Q + E+ + H N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 690 DEEGEQMLVYEFMSNGTLRD 709
E +V EF+ G L D
Sbjct: 98 LVGDELWVVMEFLEGGALTD 117
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 42/202 (20%)
Query: 173 SFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYXXXXXXXXXXXXXXX 232
+FA + + +M N+I P +P L ++L+ N+L+
Sbjct: 94 AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153
Query: 233 XDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPP 292
NNN E ++ + L L L + L DLS IP+L + ++S N L+ P
Sbjct: 154 MSNNNLERIE-DDTFQATTSLQNLQLSSNRL--THVDLSLIPSLFHANVSYNLLSTLAIP 210
Query: 293 -----------------GRLSLNITTIKLSNNKLTGT----------------------I 313
G +++ +T +KL +N LT T +
Sbjct: 211 IAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIM 270
Query: 314 PSNFSGLPRLQRLFIANNSLSG 335
F + RL+RL+I+NN L
Sbjct: 271 YHPFVKMQRLERLYISNNRLVA 292
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 35/146 (23%)
Query: 273 IPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 330
+P L L L N L S+P G + +TT+ +SNN L F LQ L +++
Sbjct: 122 VPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSS 180
Query: 331 NSLSG----------------------SIPSSIWQ----SRTLNA------TETFILDFQ 358
N L+ +IP ++ + ++N E IL Q
Sbjct: 181 NRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQ 240
Query: 359 NNNLTNISGSFNIPPNVTVRLRGNPF 384
+NNLT+ + N P V V L N
Sbjct: 241 HNNLTDTAWLLNYPGLVEVDLSYNEL 266
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 95
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 631 QIGQGGYGKVYKGIL--PDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 683
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L G +M V E G+L D+L
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRL 101
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 631 QIGQGGYGKV-YKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
+IG+G G V + G +VAVK+ Q + E+ + H N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 690 DEEGEQMLVYEFMSNGTLRD 709
E +V EF+ G L D
Sbjct: 218 LVGDELWVVMEFLEGGALTD 237
>pdb|2Y5Q|A Chain A, Listeria Monocytogenes Inlb (Internalin B) Residues 36-392
Length = 362
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 270 LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 329
L +P L L L +N++ RL+ + T+ L +N+++ +P +GL +LQ L+++
Sbjct: 130 LVHLPQLESLYLGNNKITDITVLSRLT-KLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 186
Query: 330 NNSLS 334
N +S
Sbjct: 187 KNHIS 191
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 632 IGQGGYGKVYKGILPDGT----VVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLV 683
+G+GGYGKV++ G + A+K ++ + + E L + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQL--SGIFSVIRHSGICFFL 727
L+ G+ L+ E++S G L QL GIF CF+L
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFM---EDTACFYL 127
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 632 IGQGGYGKVYKGILPDGT----VVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLV 683
+G+GGYGKV++ G + A+K ++ + + E L + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQL--SGIFSVIRHSGICFFL 727
L+ G+ L+ E++S G L QL GIF CF+L
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFM---EDTACFYL 127
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 631 QIGQGGYGKVYKGIL--PDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 683
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L G +M V E G+L D+L
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRL 101
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 619 MALATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSR 676
M L ++F +++G G G V+K P G V+A K E + + E+Q L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ +V G +GE + E M G+L DQ+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQV 94
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 631 QIGQGGYGKVYKGIL--PDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 683
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L G +M V E G+L D+L
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSLLDRL 105
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 631 QIGQGGYGKVYKGILPDGTV-VAVKRAQEGSL-QGEKE-FLTEIQFLSRLHHRNLVSLVG 687
+IG+G + VYKG+ + TV VA Q+ L + E++ F E + L L H N+V
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 688 YCDE--EGEQ--MLVYEFMSNGTLRDQLS 712
+ +G++ +LV E ++GTL+ L
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLK 121
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 632 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690
+G GG G V+ + D VA+K+ Q K L EI+ + RL H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 691 EEGEQM 696
G Q+
Sbjct: 79 PSGSQL 84
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 680
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712
N+V G+ E Q L E+ S G L D++
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 625 NFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHR 680
N+ IG+G + KV + IL G VA+K + L ++ E++ + L+H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
N+V L + E L+ E+ S G + D L
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL 105
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 631 QIGQGGYGKVYKGIL--PDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 683
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L G +M V E G+L D+L
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRL 101
>pdb|2UZX|A Chain A, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Crystal Form I
pdb|2UZX|C Chain C, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Crystal Form I
pdb|2UZY|A Chain A, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Low Resolution, Crystal Form Ii
pdb|2UZY|C Chain C, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Low Resolution, Crystal Form Ii
pdb|2WQU|A Chain A, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|B Chain B, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|C Chain C, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|D Chain D, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|E Chain E, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|F Chain F, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQV|A Chain A, Internalin Domain Of Listeria Monocytogenes Inlb:
Rhombohedral Crystal Form
pdb|2WQV|B Chain B, Internalin Domain Of Listeria Monocytogenes Inlb:
Rhombohedral Crystal Form
Length = 289
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 270 LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 329
L +P L L L +N++ RL+ + T+ L +N+++ +P +GL +LQ L+++
Sbjct: 128 LVHLPQLESLYLGNNKITDITVLSRLT-KLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 184
Query: 330 NNSLS 334
N +S
Sbjct: 185 KNHIS 189
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 631 QIGQGGYGKVYKGIL--PDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 683
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L G +M V E G+L D+L
Sbjct: 85 RLYGVVLTPPMKM-VTELAPLGSLLDRL 111
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 631 QIGQGGYGKVYKGIL--PDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 683
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L G +M V E G+L D+L
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSLLDRL 105
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 29/191 (15%)
Query: 153 LPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 212
L L+ +++ N+++ +F L+K R + NN I +R+PSL+ + L
Sbjct: 122 LASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL 181
Query: 213 NLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSR 272
Y FEG + L L+L C+++ MP+L+
Sbjct: 182 KKLEY---------------ISEGAFEG---------LFNLKYLNLGMCNIKD-MPNLTP 216
Query: 273 IPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 330
+ L L++S N I PG ++ + + N++++ + F GL L L +A+
Sbjct: 217 LVGLEELEMSGNHF-PEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAH 275
Query: 331 NSLSGSIPSSI 341
N+LS S+P +
Sbjct: 276 NNLS-SLPHDL 285
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 631 QIGQGGYGKVYKGIL--PDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 683
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L G +M V E G+L D+L
Sbjct: 85 RLYGVVLTPPMKM-VTELAPLGSLLDRL 111
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 631 QIGQGGYGKVYKGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 687
QIG+G YG+V+ G G VAVK +E S E TEI + H N++ +
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRE----TEIYQTVLMRHENILGFIA 98
Query: 688 YCDEEG-----EQMLVYEFMSNGTLRDQL 711
D +G + L+ ++ NG+L D L
Sbjct: 99 -ADIKGTGSWTQLYLITDYHENGSLYDYL 126
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL 682
+ F GQG +G V G G VA+K+ + +E L +Q L+ LHH N+
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNI 81
Query: 683 VSLVGYCDEEGEQ 695
V L Y GE+
Sbjct: 82 VQLQSYFYTLGER 94
>pdb|1H6T|A Chain A, Internalin B: Crystal Structure Of Fused N-Terminal
Domains
Length = 291
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 270 LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 329
L +P L L L +N++ RL+ + T+ L +N+++ +P +GL +LQ L+++
Sbjct: 130 LVHLPQLESLYLGNNKITDITVLSRLT-KLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 186
Query: 330 NNSLS 334
N +S
Sbjct: 187 KNHIS 191
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 625 NFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHR 680
N+ IG+G + KV + IL G VA+K + L ++ E++ + L+H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
N+V L + E L+ E+ S G + D L
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL 102
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 610 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRA--QEGSLQGEKEF 667
G + + M++ ++ QIG GG KV++ + + A+K +E Q +
Sbjct: 14 GTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSY 73
Query: 668 LTEIQFLSRL--HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
EI +L++L H ++ L Y E +Y M G +
Sbjct: 74 RNEIAYLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNI 112
>pdb|1D0B|A Chain A, Internalin B Leucine Rich Repeat Domain
Length = 213
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 270 LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 329
L +P L L L +N++ RL+ + T+ L +N+++ +P +GL +LQ L+++
Sbjct: 125 LVHLPQLESLYLGNNKITDITVLSRLT-KLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 181
Query: 330 NNSLS 334
N +S
Sbjct: 182 KNHIS 186
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 610 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRA--QEGSLQGEKEF 667
G + + M++ ++ QIG GG KV++ + + A+K +E Q +
Sbjct: 14 GTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSY 73
Query: 668 LTEIQFLSRL--HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
EI +L++L H ++ L Y E +Y M G +
Sbjct: 74 RNEIAYLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNI 112
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 619 MALATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSR 676
M L ++F +++G G G V+K P G V+A K E + + E+Q L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ +V G +GE + E M G+L DQ+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQV 94
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 619 MALATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSR 676
M L ++F +++G G G V+K P G V+A K E + + E+Q L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ +V G +GE + E M G+L DQ+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQV 94
>pdb|4AW4|A Chain A, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
pdb|4AW4|B Chain B, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
pdb|4AW4|C Chain C, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
Length = 311
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 270 LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 329
L +P L L L +N++ RL+ + T+ L +N+++ +P +GL +LQ L+++
Sbjct: 150 LVHLPQLESLYLGNNKITDITVLSRLT-KLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 206
Query: 330 NNSLS 334
N +S
Sbjct: 207 KNHIS 211
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 262 SLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321
S+QG + +PNL L+LS+NQ+ I P + N+T + L+ NKLT P + L
Sbjct: 58 SVQG----IQYLPNLTSLNLSNNQIT-DISPIQYLPNVTKLFLNGNKLTDIKP--LANLK 110
Query: 322 RLQRLFIANNSL 333
L LF+ N +
Sbjct: 111 NLGWLFLDENKV 122
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 274 PNLGYLDLSSNQLNGSIPPGRLSLN-ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNS 332
P + LDL SN++ SIP + L + + +++N+L F L LQ++++ N
Sbjct: 421 PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNP 479
Query: 333 LSGSIPSSIWQSRTLN 348
S P + SR LN
Sbjct: 480 WDCSCPRIDYLSRWLN 495
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 623 TNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH 678
++ F +++G+G VY KG + +K+ + +K TEI L RL
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-----KKIVRTEIGVLLRLS 106
Query: 679 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
H N++ L + E LV E ++ G L D++
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRI 139
>pdb|1OTN|A Chain A, Calcium-Binding Mutant Of The Internalin B Lrr Domain
Length = 236
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 270 LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 329
L +P L L L +N++ RL+ + T+ L +N+++ +P +GL +LQ L+++
Sbjct: 148 LVHLPQLESLYLGNNKITDITVLSRLT-KLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 204
Query: 330 NNSLS 334
N +S
Sbjct: 205 KNHIS 209
>pdb|1OTO|A Chain A, Calcium-Binding Mutant Of The Internalin B Lrr Domain
Length = 236
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 270 LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 329
L +P L L L +N++ RL+ + T+ L +N+++ +P +GL +LQ L+++
Sbjct: 148 LVHLPQLESLYLGNNKITDITVLSRLT-KLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 204
Query: 330 NNSLS 334
N +S
Sbjct: 205 KNHIS 209
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 619 MALATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSR 676
M L ++F +++G G G V+K P G V+A K E + + E+Q L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ +V G +GE + E M G+L DQ+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQV 94
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 619 MALATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSR 676
M L ++F +++G G G V+K P G V+A K E + + E+Q L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+ +V G +GE + E M G+L DQ+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQV 94
>pdb|1OTM|A Chain A, Calcium-Binding Mutant Of The Internalin B Lrr Domain
Length = 236
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 270 LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 329
L +P L L L +N++ RL+ + T+ L +N+++ +P +GL +LQ L+++
Sbjct: 148 LVHLPQLESLYLGNNKITDITVLSRLT-KLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 204
Query: 330 NNSLS 334
N +S
Sbjct: 205 KNHIS 209
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 273 IPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNS 332
+P L L +S N+L ++P L + +K+S N+L F L LQ++++ N
Sbjct: 450 LPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNP 508
Query: 333 LSGSIPSSIWQSRTLN 348
S P + SR LN
Sbjct: 509 WDCSCPRIDYLSRWLN 524
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 273 IPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNS 332
+P L L +S N+L ++P L + +K+++N+L F L LQ++++ N
Sbjct: 476 LPRLQELYISRNKLK-TLPDASLFPVLLVMKIASNQLKSVPDGIFDRLTSLQKIWLHTNP 534
Query: 333 LSGSIPSSIWQSRTLN 348
S P + SR LN
Sbjct: 535 WDCSCPRIDYLSRWLN 550
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 669 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
TEI+ L +L+H ++ + + D E + +V E M G L D++ G
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVG 246
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 669 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
TEI+ L +L+H ++ + + D E + +V E M G L D++ G
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVG 232
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 631 QIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689
+IG+G G V G VAVK+ Q + E+ + HH N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 690 DEEGEQMLVYEFMSNGTLRD 709
E +V EF+ G L D
Sbjct: 112 LVGDELWVVMEFLEGGALTD 131
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 241 TTIPASY-SNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-- 297
T IPA+ ++M L L LR + P + NL ++ SN+L +P G
Sbjct: 136 THIPANLLTDMRNLSHLELRANIEEMPSHLFDDLENLESIEFGSNKLR-QMPRGIFGKMP 194
Query: 298 NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN 348
+ + L++N+L F L LQ++++ N S P + SR LN
Sbjct: 195 KLKQLNLASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLN 245
>pdb|1G9U|A Chain A, Crystal Structure Of Yopm-leucine Rich Effector Protein
From Yersinia Pestis
pdb|1JL5|A Chain A, Novel Molecular Architecture Of Yopm-A Leucine-Rich
Effector Protein From Yersinia Pestis
Length = 454
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 17/76 (22%)
Query: 274 PNLGYLDLSSNQLNG--SIPPGRLSLNITTIKLSNNKLTG--TIPSNFSGLPRLQRLFIA 329
PNL YL+ SSN++ +PP LN+ SNNKL +P PRL+RL +
Sbjct: 297 PNLYYLNASSNEIRSLCDLPPSLEELNV-----SNNKLIELPALP------PRLERLIAS 345
Query: 330 NNSLSG--SIPSSIWQ 343
N L+ +P ++ Q
Sbjct: 346 FNHLAEVPELPQNLKQ 361
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 274 PNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSL 333
P L L +S N+L ++P L + +K+S N+L F L LQ++++ N
Sbjct: 451 PQLKELYISRNKL-MTLPDASLLPMLLVLKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
Query: 334 SGSIPSSIWQSRTLN 348
S P + SR LN
Sbjct: 510 DCSCPRIDYLSRWLN 524
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRLHH 679
T+ + IG+G + V + + L G A K ++ S + ++ E + L H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 680 RNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
N+V L EEG LV++ ++ G L
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL 90
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 15/101 (14%)
Query: 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-- 679
++F +GQG +G+V K D A+K+ + + L+E+ L+ L+H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQY 63
Query: 680 -----------RNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709
RN V + ++ + E+ NGTL D
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD 104
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 242 TIPASYSNMSKL---LKLSLRNCSLQGPMPDLSRI-PNLGYLDLSSNQLNGSIPPGRLSL 297
++P +YS M L + CS G I P+ LDL +N ++ L
Sbjct: 18 SLPPTYSAMCPFGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGL 77
Query: 298 -NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSL---SGSIPSSIWQSR 345
++ + L NNK++ FS L +LQ+L+I+ N L ++PSS+ + R
Sbjct: 78 QHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVELR 129
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 669 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
TEI+ L +L+H ++ + + D E + +V E M G L D++ G
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVG 107
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 669 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
TEI+ L +L+H ++ + + D E + +V E M G L D++ G
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVG 106
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 669 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
TEI+ L +L+H ++ + + D E + +V E M G L D++ G
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVG 113
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 669 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
TEI+ L +L+H ++ + + D E + +V E M G L D++ G
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVG 107
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 627 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRN 681
+S IG+G +G VY G D ++ A + +Q + FL E + L+H N
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 682 LVSLVG-YCDEEGEQMLVYEFMSNGTL 707
+++L+G EG ++ +M +G L
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDL 110
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 669 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713
TEI+ L +L+H ++ + + D E + +V E M G L D++ G
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVG 107
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 298 NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGS--IPSSIWQSRTLNATETFIL 355
NI I LS NK S+F+ +P LQRL + +L PS R L IL
Sbjct: 431 NIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLT-----IL 485
Query: 356 DFQNNNLTNI 365
D NNN+ NI
Sbjct: 486 DLSNNNIANI 495
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 21/130 (16%)
Query: 599 RHSSKTSIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGT---VVAVKR 655
R +S+TSI + E + IG+G +G+VY G ++ ++R
Sbjct: 16 RKASQTSIFLQ--------EWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIER 67
Query: 656 AQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIF 715
E L K F E+ + H N+V +G C ++ TL +
Sbjct: 68 DNEDQL---KAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL-------Y 117
Query: 716 SVIRHSGICF 725
SV+R + I
Sbjct: 118 SVVRDAKIVL 127
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 247 YSNMSKLLKLSLRNCSLQGPMPD--LSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTI 302
+ +++L KLSL +Q +PD ++ L L L N+L S+P G + +
Sbjct: 48 FDKLTQLTKLSLSQNQIQS-LPDGVFDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKEL 105
Query: 303 KLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN 348
L N+L F L LQ++++ N S P + SR LN
Sbjct: 106 ALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLN 151
>pdb|2BNH|A Chain A, Porcine Ribonuclease Inhibitor
pdb|1DFJ|I Chain I, Ribonuclease Inhibitor Complexed With Ribonuclease A
Length = 457
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 15/128 (11%)
Query: 251 SKLLKLSLRNCSLQ----GPMPD-LSRIPNLGYLDLSSNQLNGS----IPPGRL--SLNI 299
K+ KLSL+NCSL G +P L +P L L LS N L + + G L ++
Sbjct: 81 CKIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHL 140
Query: 300 TTIKLSNNKLTGTIPSNFSGLPR----LQRLFIANNSLSGSIPSSIWQSRTLNATETFIL 355
++L +LT + + R L+ L ++NN + + + Q +A + L
Sbjct: 141 EKLQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETL 200
Query: 356 DFQNNNLT 363
+N LT
Sbjct: 201 RLENCGLT 208
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Query: 610 GVRSFTYGEMALAT---NNFNSSTQIGQGGYGKVYKGILPDGT---VVAVKRAQEGSLQG 663
G + + MA T +++ ++G+G + V + + T + ++ S +
Sbjct: 14 GTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARD 73
Query: 664 EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707
++ E + L H N+V L EEG LV++ ++ G L
Sbjct: 74 HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 117
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 292 PGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATE 351
P L NIT + L++N+L +NF+ +L L + N++S P + L
Sbjct: 30 PDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK--- 86
Query: 352 TFILDFQNNNLTNISG-SFNIPPNVT---------VRLRGNPFCLNTNAEQFCGSH 397
+L+ Q+N L+ +S +F N+T +++ NPF N SH
Sbjct: 87 --VLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSH 140
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 292 PGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATE 351
P L NIT + L++N+L +NF+ +L L + N++S P + L
Sbjct: 25 PDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK--- 81
Query: 352 TFILDFQNNNLTNIS-GSFNIPPNVT---------VRLRGNPFCLNTNAEQFCGSH 397
+L+ Q+N L+ +S +F N+T +++ NPF N SH
Sbjct: 82 --VLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSH 135
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 25/130 (19%)
Query: 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSR 676
+ + +G GG+G VY GI + D VA+K ++ G L E+ L +
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 677 LH--HRNLVSLVGYCDEEGEQMLVYEFM-----------SNGTLRDQLS-----GIFSVI 718
+ ++ L+ + + +L+ E M G L+++L+ + +
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 719 RHSGICFFLH 728
RH C LH
Sbjct: 128 RHCHNCGVLH 137
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 292 PGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATE 351
P L NIT + L++N+L +NF+ +L L + N++S P + L
Sbjct: 20 PDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK--- 76
Query: 352 TFILDFQNNNLTNISG-SFNIPPNVT---------VRLRGNPFCLNTNAEQFCGSH 397
+L+ Q+N L+ +S +F N+T +++ NPF N SH
Sbjct: 77 --VLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSH 130
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Query: 631 QIGQGGYGKVY----KGILPDGTVVAVKRAQ--EGSLQGE--------KEFLTEIQFLSR 676
++G G YG+V K + + +K++Q +G + +E EI L
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
L H N++ L +++ LV EF G L +Q+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI 137
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 625 NFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHR 680
+F +G+G + VY+ + G VA+K + ++ + E++ +L H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 681 NLVSLVGYCDEEGEQMLVYEFMSNGTL 707
+++ L Y ++ LV E NG +
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEM 98
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 621 LATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLH 678
L ++F +++G G G V+K P G V+A K E + + E+Q L +
Sbjct: 65 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 124
Query: 679 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711
+V G +GE + E M G+L DQ+
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSL-DQV 156
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 621 LATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSR 676
+ N F +G+GG+G+V + G + A K+ ++ ++ GE L E Q L +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 677 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708
++ R +VSL + + LV M+ G L+
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLK 272
>pdb|3TT3|H Chain H, Crystal Structure Of Leut In The Inward-Open Conformation
In Complex With Fab
Length = 221
Score = 28.9 bits (63), Expect = 9.9, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 591 NYHAISRRRHSSKTSIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV 650
N + + R+ K ++ +D S Y E++ T+ ++ +G YG + GT+
Sbjct: 55 NDYTTNNRKFKGKATLTVDRSSSTAYMELSSLTSEDSAVYYCARGNYGSAWFAYWGQGTL 114
Query: 651 VAVKRAQ 657
V V A+
Sbjct: 115 VTVSAAK 121
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,256,213
Number of Sequences: 62578
Number of extensions: 799400
Number of successful extensions: 3092
Number of sequences better than 100.0: 715
Number of HSP's better than 100.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 433
Number of HSP's that attempted gapping in prelim test: 2229
Number of HSP's gapped (non-prelim): 900
length of query: 728
length of database: 14,973,337
effective HSP length: 106
effective length of query: 622
effective length of database: 8,340,069
effective search space: 5187522918
effective search space used: 5187522918
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)