Query 004842
Match_columns 728
No_of_seqs 643 out of 4762
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 13:50:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004842.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004842hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3.6E-58 7.7E-63 559.7 45.1 347 32-386 26-418 (968)
2 PLN00113 leucine-rich repeat r 100.0 9.8E-37 2.1E-41 371.6 30.3 587 80-713 162-776 (968)
3 KOG4194 Membrane glycoprotein 100.0 6.9E-31 1.5E-35 274.5 4.2 299 82-384 125-428 (873)
4 KOG4194 Membrane glycoprotein 100.0 1.2E-30 2.6E-35 272.8 4.3 317 62-385 49-405 (873)
5 KOG0444 Cytoskeletal regulator 99.9 6.2E-29 1.3E-33 261.1 -3.3 294 80-384 76-374 (1255)
6 KOG0444 Cytoskeletal regulator 99.9 4.8E-28 1E-32 254.5 -6.3 294 82-385 55-352 (1255)
7 KOG0472 Leucine-rich repeat pr 99.9 5.3E-27 1.1E-31 235.9 -6.6 291 82-385 137-541 (565)
8 KOG0472 Leucine-rich repeat pr 99.9 6.2E-26 1.4E-30 228.2 -9.9 263 84-384 47-309 (565)
9 PRK15387 E3 ubiquitin-protein 99.9 4.8E-21 1E-25 218.5 18.9 259 83-388 202-461 (788)
10 PRK15370 E3 ubiquitin-protein 99.9 1.3E-20 2.7E-25 216.5 20.3 318 26-385 54-428 (754)
11 KOG4237 Extracellular matrix p 99.9 1.1E-23 2.4E-28 212.0 -4.4 312 60-389 38-363 (498)
12 PLN03210 Resistant to P. syrin 99.8 2.2E-19 4.7E-24 220.2 25.6 278 84-381 591-878 (1153)
13 KOG1187 Serine/threonine prote 99.8 1.7E-20 3.8E-25 200.0 12.2 107 610-716 61-168 (361)
14 PRK15370 E3 ubiquitin-protein 99.8 6.8E-20 1.5E-24 210.4 15.8 252 82-364 178-429 (754)
15 KOG0618 Serine/threonine phosp 99.8 4.3E-22 9.3E-27 219.8 -4.0 280 84-384 158-488 (1081)
16 PRK15387 E3 ubiquitin-protein 99.8 2E-19 4.3E-24 205.3 17.5 240 82-366 222-461 (788)
17 PLN03210 Resistant to P. syrin 99.8 7.4E-19 1.6E-23 215.5 23.2 286 81-383 610-904 (1153)
18 KOG4237 Extracellular matrix p 99.8 3.5E-21 7.5E-26 194.1 -5.2 265 79-362 88-358 (498)
19 KOG0618 Serine/threonine phosp 99.8 4.9E-20 1.1E-24 203.7 -0.6 277 83-385 46-323 (1081)
20 cd00116 LRR_RI Leucine-rich re 99.8 6.5E-20 1.4E-24 195.1 -1.1 249 86-334 2-291 (319)
21 cd00116 LRR_RI Leucine-rich re 99.7 3.2E-19 7E-24 189.7 -3.5 270 110-384 2-319 (319)
22 KOG0617 Ras suppressor protein 99.7 1.5E-19 3.2E-24 162.5 -5.7 163 103-271 30-193 (264)
23 KOG0617 Ras suppressor protein 99.7 5.3E-19 1.1E-23 159.0 -5.6 163 81-250 32-195 (264)
24 KOG0196 Tyrosine kinase, EPH ( 99.7 8.9E-17 1.9E-21 174.8 8.7 107 613-719 609-729 (996)
25 KOG0595 Serine/threonine-prote 99.6 8.4E-16 1.8E-20 156.9 9.4 96 624-719 10-108 (429)
26 PLN03150 hypothetical protein; 99.6 4.9E-15 1.1E-19 170.0 14.3 158 29-190 366-527 (623)
27 KOG1026 Nerve growth factor re 99.6 1.1E-15 2.4E-20 169.7 7.1 96 620-715 482-584 (774)
28 KOG1094 Discoidin domain recep 99.5 1.3E-14 2.9E-19 153.3 9.9 93 622-714 536-629 (807)
29 KOG0197 Tyrosine kinases [Sign 99.5 4.4E-15 9.5E-20 157.3 5.9 89 624-713 206-294 (468)
30 KOG0194 Protein tyrosine kinas 99.5 8.7E-15 1.9E-19 157.5 7.9 100 617-716 150-257 (474)
31 KOG0192 Tyrosine kinase specif 99.5 1.5E-14 3.2E-19 153.5 8.9 85 629-713 46-133 (362)
32 KOG2052 Activin A type IB rece 99.5 3.2E-14 6.9E-19 146.5 10.4 88 623-714 210-303 (513)
33 KOG3653 Transforming growth fa 99.5 2.2E-13 4.8E-18 141.4 11.7 99 625-727 211-324 (534)
34 KOG4278 Protein tyrosine kinas 99.5 2.3E-14 5E-19 151.9 4.1 99 616-715 259-358 (1157)
35 KOG0615 Serine/threonine prote 99.5 9.3E-14 2E-18 141.9 7.8 93 625-717 173-273 (475)
36 KOG1025 Epidermal growth facto 99.5 6.2E-14 1.3E-18 153.5 6.1 92 626-718 698-795 (1177)
37 KOG0575 Polo-like serine/threo 99.4 8.8E-13 1.9E-17 141.5 8.7 104 624-728 18-125 (592)
38 KOG0600 Cdc2-related protein k 99.4 5.8E-13 1.3E-17 139.4 7.0 96 625-721 118-218 (560)
39 KOG0532 Leucine-rich repeat (L 99.4 3.2E-14 6.9E-19 150.4 -4.0 197 129-360 74-270 (722)
40 KOG1095 Protein tyrosine kinas 99.4 1.1E-12 2.4E-17 151.4 8.1 92 623-714 691-789 (1025)
41 KOG0581 Mitogen-activated prot 99.3 3.2E-12 6.9E-17 129.8 8.5 87 628-714 83-172 (364)
42 KOG0659 Cdk activating kinase 99.3 2.7E-12 5.9E-17 124.2 6.2 94 625-719 3-99 (318)
43 COG4886 Leucine-rich repeat (L 99.3 3.5E-12 7.6E-17 139.9 7.7 201 110-318 97-298 (394)
44 KOG0532 Leucine-rich repeat (L 99.3 7.7E-14 1.7E-18 147.6 -5.2 174 84-267 77-250 (722)
45 KOG0580 Serine/threonine prote 99.3 1.8E-12 3.9E-17 123.7 4.0 92 623-714 21-116 (281)
46 COG4886 Leucine-rich repeat (L 99.2 8.8E-12 1.9E-16 136.7 7.2 201 133-342 96-298 (394)
47 KOG0611 Predicted serine/threo 99.2 3.6E-12 7.9E-17 129.4 3.1 95 625-719 54-152 (668)
48 KOG0605 NDR and related serine 99.2 1.9E-11 4E-16 129.4 8.2 101 621-721 138-242 (550)
49 PF07714 Pkinase_Tyr: Protein 99.2 1.7E-11 3.6E-16 126.3 7.6 86 629-714 4-95 (259)
50 PHA02988 hypothetical protein; 99.2 4.8E-11 1E-15 124.6 10.6 100 611-716 12-118 (283)
51 cd05064 PTKc_EphR_A10 Catalyti 99.2 3.5E-11 7.6E-16 124.4 9.2 92 624-715 5-101 (266)
52 KOG0598 Ribosomal protein S6 k 99.2 2E-11 4.4E-16 124.0 6.8 100 623-722 24-127 (357)
53 KOG0663 Protein kinase PITSLRE 99.2 1E-11 2.2E-16 123.8 4.4 92 624-716 76-172 (419)
54 KOG4257 Focal adhesion tyrosin 99.2 2.2E-11 4.7E-16 130.1 6.7 97 622-719 387-489 (974)
55 cd06650 PKc_MEK1 Catalytic dom 99.2 7.8E-11 1.7E-15 126.1 10.5 92 624-715 5-98 (333)
56 KOG0193 Serine/threonine prote 99.2 1.5E-11 3.3E-16 131.6 4.9 108 617-727 385-505 (678)
57 KOG0597 Serine-threonine prote 99.2 1.2E-11 2.6E-16 130.9 3.6 94 625-719 3-99 (808)
58 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.2 4.9E-11 1.1E-15 123.9 8.3 84 631-714 2-110 (274)
59 cd06624 STKc_ASK Catalytic dom 99.2 7.9E-11 1.7E-15 121.8 9.8 96 619-714 3-99 (268)
60 KOG0591 NIMA (never in mitosis 99.2 2.3E-12 5E-17 125.5 -1.6 88 625-712 20-112 (375)
61 cd05105 PTKc_PDGFR_alpha Catal 99.2 5.9E-11 1.3E-15 129.8 9.1 94 621-714 34-135 (400)
62 cd06649 PKc_MEK2 Catalytic dom 99.2 9.6E-11 2.1E-15 125.3 10.5 92 624-715 5-98 (331)
63 cd05629 STKc_NDR_like_fungal C 99.2 7.9E-11 1.7E-15 128.4 9.6 91 625-715 2-96 (377)
64 cd05104 PTKc_Kit Catalytic dom 99.2 5E-11 1.1E-15 129.7 7.7 95 621-715 32-134 (375)
65 cd05114 PTKc_Tec_Rlk Catalytic 99.2 8.5E-11 1.8E-15 120.7 9.0 90 625-715 5-94 (256)
66 cd05626 STKc_LATS2 Catalytic d 99.1 9.6E-11 2.1E-15 127.9 9.6 91 625-715 2-96 (381)
67 PTZ00263 protein kinase A cata 99.1 9.3E-11 2E-15 125.3 9.3 93 624-716 18-114 (329)
68 cd05599 STKc_NDR_like Catalyti 99.1 8.6E-11 1.9E-15 127.5 9.0 93 624-716 1-97 (364)
69 KOG0593 Predicted protein kina 99.1 2.6E-11 5.7E-16 119.4 3.8 86 626-711 4-92 (396)
70 cd05096 PTKc_DDR1 Catalytic do 99.1 1.9E-10 4E-15 121.5 10.6 91 624-714 5-113 (304)
71 cd06646 STKc_MAP4K5 Catalytic 99.1 1.9E-10 4.2E-15 118.7 10.1 92 624-715 9-101 (267)
72 cd05600 STKc_Sid2p_Dbf2p Catal 99.1 1.7E-10 3.8E-15 123.4 10.0 91 625-715 2-96 (333)
73 cd06615 PKc_MEK Catalytic doma 99.1 2.1E-10 4.5E-15 121.4 10.4 91 625-715 2-94 (308)
74 cd05598 STKc_LATS Catalytic do 99.1 1.7E-10 3.6E-15 125.8 10.0 91 625-715 2-96 (376)
75 cd05625 STKc_LATS1 Catalytic d 99.1 1.6E-10 3.6E-15 126.1 9.7 91 625-715 2-96 (382)
76 cd05612 STKc_PRKX_like Catalyt 99.1 9.9E-11 2.2E-15 122.8 7.6 92 625-716 2-97 (291)
77 cd05107 PTKc_PDGFR_beta Cataly 99.1 1.2E-10 2.6E-15 127.4 8.5 95 621-715 34-136 (401)
78 cd05595 STKc_PKB_beta Catalyti 99.1 1.9E-10 4.1E-15 122.5 9.7 87 630-716 1-91 (323)
79 cd05571 STKc_PKB Catalytic dom 99.1 2.2E-10 4.8E-15 122.1 9.9 86 630-715 1-90 (323)
80 KOG0616 cAMP-dependent protein 99.1 1.1E-10 2.4E-15 114.8 6.9 96 624-719 44-143 (355)
81 PTZ00426 cAMP-dependent protei 99.1 2.1E-10 4.5E-15 123.1 9.4 93 624-716 30-127 (340)
82 KOG0032 Ca2+/calmodulin-depend 99.1 1.8E-10 3.8E-15 123.6 8.5 91 624-714 35-130 (382)
83 cd05102 PTKc_VEGFR3 Catalytic 99.1 1.3E-10 2.9E-15 124.6 7.5 92 623-714 6-106 (338)
84 cd05628 STKc_NDR1 Catalytic do 99.1 2.4E-10 5.2E-15 123.9 9.5 93 624-716 1-97 (363)
85 cd05072 PTKc_Lyn Catalytic dom 99.1 2.2E-10 4.8E-15 117.9 8.4 90 624-714 6-95 (261)
86 PLN03150 hypothetical protein; 99.1 2E-10 4.4E-15 132.0 8.9 110 131-240 419-529 (623)
87 KOG0578 p21-activated serine/t 99.1 4.6E-11 1E-15 127.4 3.3 91 624-714 273-364 (550)
88 cd05596 STKc_ROCK Catalytic do 99.1 1.8E-10 3.8E-15 125.2 7.9 93 622-714 41-137 (370)
89 KOG0583 Serine/threonine prote 99.1 2.4E-10 5.3E-15 122.5 8.9 98 622-719 15-119 (370)
90 cd05593 STKc_PKB_gamma Catalyt 99.1 3.6E-10 7.7E-15 120.7 10.2 86 630-715 1-90 (328)
91 KOG1259 Nischarin, modulator o 99.1 1.8E-11 3.9E-16 120.1 0.0 198 82-287 182-412 (490)
92 KOG0198 MEKK and related serin 99.1 2.1E-10 4.5E-15 118.4 7.8 92 624-715 17-111 (313)
93 cd05597 STKc_DMPK_like Catalyt 99.1 3.7E-10 8E-15 120.8 9.9 90 625-714 2-95 (331)
94 cd05148 PTKc_Srm_Brk Catalytic 99.1 2E-10 4.4E-15 118.1 7.6 93 622-714 4-96 (261)
95 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.1 4.4E-10 9.6E-15 117.3 10.0 92 624-715 4-102 (284)
96 cd05621 STKc_ROCK2 Catalytic d 99.1 3E-10 6.5E-15 123.3 8.9 93 622-714 41-137 (370)
97 cd06620 PKc_MAPKK_Byr1_like Ca 99.1 2.8E-10 6E-15 118.8 8.4 92 624-715 5-98 (284)
98 cd05085 PTKc_Fer Catalytic dom 99.1 5.2E-10 1.1E-14 114.3 10.1 86 630-715 1-87 (250)
99 KOG0574 STE20-like serine/thre 99.1 1.9E-11 4.2E-16 119.7 -0.5 93 626-720 35-128 (502)
100 cd05033 PTKc_EphR Catalytic do 99.1 5.8E-10 1.2E-14 115.2 10.4 92 624-715 4-100 (266)
101 cd05624 STKc_MRCK_beta Catalyt 99.1 3.9E-10 8.4E-15 120.6 9.2 90 625-714 2-95 (331)
102 KOG4721 Serine/threonine prote 99.1 8.2E-11 1.8E-15 124.5 3.8 90 630-727 130-229 (904)
103 KOG0582 Ste20-like serine/thre 99.1 3.1E-10 6.7E-15 117.5 7.9 92 623-714 25-118 (516)
104 cd06631 STKc_YSK4 Catalytic do 99.1 7.3E-10 1.6E-14 114.3 10.7 90 626-715 2-97 (265)
105 cd05582 STKc_RSK_N N-terminal 99.0 4.7E-10 1E-14 119.2 9.4 86 630-715 2-93 (318)
106 cd06611 STKc_SLK_like Catalyti 99.0 3.7E-10 8.1E-15 117.5 8.5 93 623-715 4-97 (280)
107 KOG3207 Beta-tubulin folding c 99.0 3.3E-11 7.3E-16 124.3 0.5 208 103-312 118-341 (505)
108 KOG0658 Glycogen synthase kina 99.0 9.7E-11 2.1E-15 118.9 3.8 84 625-713 25-114 (364)
109 cd05594 STKc_PKB_alpha Catalyt 99.0 6.5E-10 1.4E-14 118.6 10.1 86 630-715 1-90 (325)
110 cd05601 STKc_CRIK Catalytic do 99.0 4.8E-10 1E-14 119.8 9.0 90 625-714 2-95 (330)
111 cd05113 PTKc_Btk_Bmx Catalytic 99.0 4.6E-10 9.9E-15 115.3 8.4 89 625-714 5-93 (256)
112 cd05622 STKc_ROCK1 Catalytic d 99.0 4.8E-10 1E-14 121.8 9.0 99 616-714 35-137 (371)
113 cd05106 PTKc_CSF-1R Catalytic 99.0 3.1E-10 6.6E-15 123.5 7.2 94 621-714 35-136 (374)
114 cd05077 PTK_Jak1_rpt1 Pseudoki 99.0 6.1E-10 1.3E-14 114.8 9.1 86 630-715 1-99 (262)
115 cd05573 STKc_ROCK_NDR_like Cat 99.0 3.8E-10 8.2E-15 121.7 7.8 90 625-714 2-95 (350)
116 cd05108 PTKc_EGFR Catalytic do 99.0 5.4E-10 1.2E-14 118.7 8.8 91 624-715 7-103 (316)
117 cd05585 STKc_YPK1_like Catalyt 99.0 6.3E-10 1.4E-14 118.0 9.3 85 632-716 1-89 (312)
118 KOG0661 MAPK related serine/th 99.0 3.5E-11 7.7E-16 125.3 -0.3 97 625-723 11-112 (538)
119 KOG0586 Serine/threonine prote 99.0 7E-10 1.5E-14 119.6 9.3 94 622-715 54-150 (596)
120 cd05066 PTKc_EphR_A Catalytic 99.0 7.1E-10 1.5E-14 114.6 9.3 92 624-715 4-100 (267)
121 cd05059 PTKc_Tec_like Catalyti 99.0 6.6E-10 1.4E-14 114.1 9.0 90 625-715 5-94 (256)
122 PLN00034 mitogen-activated pro 99.0 2.7E-10 5.8E-15 123.0 6.2 86 626-711 76-163 (353)
123 cd06645 STKc_MAP4K3 Catalytic 99.0 5.4E-10 1.2E-14 115.4 8.2 91 625-715 10-101 (267)
124 cd05049 PTKc_Trk Catalytic dom 99.0 6.7E-10 1.5E-14 115.5 9.0 91 624-714 5-102 (280)
125 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.0 9.2E-10 2E-14 113.9 9.9 84 630-713 1-88 (269)
126 cd05627 STKc_NDR2 Catalytic do 99.0 7.4E-10 1.6E-14 119.9 9.5 92 625-716 2-97 (360)
127 cd05068 PTKc_Frk_like Catalyti 99.0 8.3E-10 1.8E-14 113.7 9.4 92 623-715 5-96 (261)
128 cd05623 STKc_MRCK_alpha Cataly 99.0 8.2E-10 1.8E-14 118.2 9.7 90 625-714 2-95 (332)
129 cd06656 STKc_PAK3 Catalytic do 99.0 8.8E-10 1.9E-14 115.9 9.7 91 624-714 19-110 (297)
130 cd05631 STKc_GRK4 Catalytic do 99.0 1E-09 2.2E-14 114.8 10.0 88 626-713 2-93 (285)
131 cd05605 STKc_GRK4_like Catalyt 99.0 9.4E-10 2E-14 115.0 9.7 89 626-714 2-94 (285)
132 cd05046 PTK_CCK4 Pseudokinase 99.0 7.2E-10 1.6E-14 115.0 8.7 92 624-715 5-103 (275)
133 KOG1909 Ran GTPase-activating 99.0 1.8E-11 3.9E-16 123.1 -3.2 137 151-287 89-254 (382)
134 cd05084 PTKc_Fes Catalytic dom 99.0 1E-09 2.2E-14 112.3 9.5 86 630-715 1-88 (252)
135 cd05090 PTKc_Ror1 Catalytic do 99.0 1.1E-09 2.3E-14 114.3 9.8 90 624-713 5-100 (283)
136 KOG0199 ACK and related non-re 99.0 2.5E-10 5.4E-15 123.7 5.0 85 628-713 114-203 (1039)
137 cd06632 STKc_MEKK1_plant Catal 99.0 1.3E-09 2.9E-14 111.6 10.2 90 626-715 2-97 (258)
138 cd05584 STKc_p70S6K Catalytic 99.0 1.1E-09 2.4E-14 116.7 9.9 87 630-716 2-96 (323)
139 KOG0588 Serine/threonine prote 99.0 3.5E-10 7.6E-15 122.4 5.9 101 626-726 14-118 (786)
140 KOG4250 TANK binding protein k 99.0 2E-10 4.4E-15 125.4 4.1 88 627-714 16-111 (732)
141 cd06641 STKc_MST3 Catalytic do 99.0 1.5E-09 3.2E-14 112.9 10.5 89 626-714 6-96 (277)
142 cd05039 PTKc_Csk_like Catalyti 99.0 9E-10 2E-14 113.0 8.7 90 624-715 6-95 (256)
143 cd05061 PTKc_InsR Catalytic do 99.0 9.3E-10 2E-14 115.2 8.9 92 622-713 4-102 (288)
144 KOG1259 Nischarin, modulator o 99.0 7.3E-11 1.6E-15 115.9 0.4 208 122-366 206-415 (490)
145 cd05034 PTKc_Src_like Catalyti 99.0 1.1E-09 2.4E-14 112.6 9.2 91 623-714 5-95 (261)
146 PF14580 LRR_9: Leucine-rich r 99.0 2.3E-10 4.9E-15 108.4 3.7 110 102-215 15-126 (175)
147 cd05065 PTKc_EphR_B Catalytic 99.0 9.5E-10 2.1E-14 113.7 8.7 91 625-715 5-100 (269)
148 cd06654 STKc_PAK1 Catalytic do 99.0 1.3E-09 2.7E-14 114.7 9.7 91 624-714 20-111 (296)
149 PF14580 LRR_9: Leucine-rich r 99.0 1.3E-10 2.8E-15 110.0 1.9 85 127-215 16-101 (175)
150 cd05588 STKc_aPKC Catalytic do 99.0 1.6E-09 3.5E-14 115.7 10.5 87 630-716 1-92 (329)
151 cd07869 STKc_PFTAIRE1 Catalyti 99.0 1.5E-09 3.2E-14 114.5 9.9 92 623-715 4-97 (303)
152 cd06630 STKc_MEKK1 Catalytic d 99.0 1.3E-09 2.8E-14 112.6 9.1 91 625-715 1-98 (268)
153 cd06629 STKc_MAPKKK_Bck1_like 99.0 1.2E-09 2.7E-14 113.0 8.9 90 626-715 3-103 (272)
154 cd05093 PTKc_TrkB Catalytic do 99.0 1.6E-09 3.5E-14 113.3 9.9 91 624-714 5-101 (288)
155 cd05063 PTKc_EphR_A2 Catalytic 99.0 1.3E-09 2.9E-14 112.5 9.1 92 624-715 5-101 (268)
156 KOG3207 Beta-tubulin folding c 99.0 7.4E-11 1.6E-15 121.8 -0.4 208 127-335 118-340 (505)
157 cd07871 STKc_PCTAIRE3 Catalyti 99.0 1.6E-09 3.5E-14 113.4 9.7 92 624-716 5-98 (288)
158 cd05580 STKc_PKA Catalytic dom 99.0 1.5E-09 3.2E-14 113.8 9.4 91 625-715 2-96 (290)
159 cd05112 PTKc_Itk Catalytic dom 99.0 1.6E-09 3.4E-14 111.1 9.4 91 624-715 4-94 (256)
160 cd05062 PTKc_IGF-1R Catalytic 99.0 1.2E-09 2.6E-14 113.6 8.6 93 622-714 4-103 (277)
161 KOG0610 Putative serine/threon 99.0 7.6E-10 1.7E-14 113.8 6.7 101 626-726 79-184 (459)
162 cd05570 STKc_PKC Catalytic dom 99.0 1.7E-09 3.6E-14 115.0 9.6 86 630-715 1-91 (318)
163 KOG0662 Cyclin-dependent kinas 99.0 2.7E-10 5.9E-15 103.8 2.9 92 626-718 4-98 (292)
164 cd06647 STKc_PAK_I Catalytic d 99.0 1.4E-09 3.1E-14 114.1 8.8 91 624-714 19-110 (293)
165 KOG0531 Protein phosphatase 1, 99.0 7.4E-11 1.6E-15 129.8 -1.0 249 104-367 70-322 (414)
166 cd06642 STKc_STK25-YSK1 Cataly 99.0 8E-10 1.7E-14 114.9 6.8 89 626-714 6-96 (277)
167 PRK13184 pknD serine/threonine 99.0 2.4E-09 5.2E-14 124.9 11.4 90 624-713 2-95 (932)
168 cd05589 STKc_PKN Catalytic dom 99.0 1.3E-09 2.9E-14 116.1 8.6 89 626-714 1-96 (324)
169 cd05042 PTKc_Aatyk Catalytic d 99.0 2.3E-09 5.1E-14 110.8 10.2 84 631-714 2-89 (269)
170 cd05103 PTKc_VEGFR2 Catalytic 99.0 1.2E-09 2.5E-14 117.5 8.1 91 624-714 7-106 (343)
171 cd05603 STKc_SGK2 Catalytic do 99.0 1.9E-09 4E-14 114.8 9.6 86 630-715 1-91 (321)
172 cd05592 STKc_nPKC_theta_delta 99.0 1.9E-09 4.1E-14 114.5 9.6 86 630-715 1-91 (316)
173 cd05050 PTKc_Musk Catalytic do 99.0 1.9E-09 4.2E-14 112.7 9.6 92 623-714 4-102 (288)
174 PTZ00267 NIMA-related protein 99.0 2.2E-09 4.7E-14 120.7 10.6 88 626-713 69-158 (478)
175 cd05618 STKc_aPKC_iota Catalyt 99.0 2.7E-09 5.9E-14 114.0 10.6 86 630-715 1-91 (329)
176 cd05575 STKc_SGK Catalytic dom 98.9 2.5E-09 5.5E-14 113.9 10.2 87 630-716 1-92 (323)
177 cd08228 STKc_Nek6 Catalytic do 98.9 3.6E-09 7.7E-14 109.2 11.0 89 624-712 2-94 (267)
178 cd05038 PTKc_Jak_rpt2 Catalyti 98.9 2.4E-09 5.2E-14 111.5 9.7 91 625-715 5-103 (284)
179 KOG0531 Protein phosphatase 1, 98.9 1.1E-10 2.3E-15 128.5 -0.6 263 106-387 49-320 (414)
180 cd06623 PKc_MAPKK_plant_like C 98.9 3.3E-09 7.1E-14 109.1 10.5 90 625-714 2-93 (264)
181 cd08529 STKc_FA2-like Catalyti 98.9 3E-09 6.5E-14 108.9 10.2 90 625-714 1-93 (256)
182 cd05036 PTKc_ALK_LTK Catalytic 98.9 2.1E-09 4.5E-14 111.8 9.1 92 623-714 5-103 (277)
183 KOG0577 Serine/threonine prote 98.9 1.8E-10 3.9E-15 122.4 1.1 88 626-714 28-119 (948)
184 cd05097 PTKc_DDR_like Catalyti 98.9 2E-09 4.3E-14 113.1 8.9 91 624-714 5-111 (295)
185 cd08224 STKc_Nek6_Nek7 Catalyt 98.9 3.5E-09 7.6E-14 109.2 10.6 90 624-713 2-95 (267)
186 cd06612 STKc_MST1_2 Catalytic 98.9 2.4E-09 5.1E-14 109.7 9.2 91 624-716 3-94 (256)
187 cd05052 PTKc_Abl Catalytic dom 98.9 2.2E-09 4.9E-14 110.6 9.0 90 624-714 6-96 (263)
188 cd05591 STKc_nPKC_epsilon Cata 98.9 2.7E-09 5.7E-14 113.7 9.8 87 630-716 1-92 (321)
189 cd06644 STKc_STK10_LOK Catalyt 98.9 3.2E-09 6.9E-14 111.3 10.2 91 624-714 12-103 (292)
190 cd05614 STKc_MSK2_N N-terminal 98.9 2.8E-09 6.2E-14 114.0 10.0 92 625-716 1-101 (332)
191 cd06643 STKc_SLK Catalytic dom 98.9 3E-09 6.5E-14 110.9 9.9 88 627-714 8-96 (282)
192 KOG0592 3-phosphoinositide-dep 98.9 7.2E-10 1.6E-14 117.6 5.1 96 622-717 71-171 (604)
193 cd06613 STKc_MAP4K3_like Catal 98.9 2.9E-09 6.3E-14 109.5 9.6 91 624-714 3-94 (262)
194 cd05067 PTKc_Lck_Blk Catalytic 98.9 3E-09 6.5E-14 109.4 9.7 89 624-714 6-94 (260)
195 cd05619 STKc_nPKC_theta Cataly 98.9 3.2E-09 6.9E-14 112.8 10.1 85 630-714 1-90 (316)
196 cd05037 PTK_Jak_rpt1 Pseudokin 98.9 2.1E-09 4.6E-14 110.3 8.5 84 630-715 1-95 (259)
197 cd06622 PKc_MAPKK_PBS2_like Ca 98.9 1.9E-09 4E-14 112.7 8.2 90 625-714 2-93 (286)
198 cd07848 STKc_CDKL5 Catalytic d 98.9 2.3E-09 4.9E-14 112.1 8.8 88 625-712 2-92 (287)
199 cd06625 STKc_MEKK3_like Cataly 98.9 3.6E-09 7.8E-14 108.9 10.1 92 624-715 2-99 (263)
200 cd05604 STKc_SGK3 Catalytic do 98.9 3.1E-09 6.7E-14 113.4 9.9 87 630-716 1-92 (325)
201 cd07846 STKc_CDKL2_3 Catalytic 98.9 1.5E-09 3.2E-14 113.3 7.3 90 625-714 2-94 (286)
202 cd05590 STKc_nPKC_eta Catalyti 98.9 2.5E-09 5.4E-14 113.8 9.1 87 630-716 1-92 (320)
203 cd05092 PTKc_TrkA Catalytic do 98.9 3.9E-09 8.4E-14 110.0 10.4 91 624-714 5-101 (280)
204 KOG0201 Serine/threonine prote 98.9 3.4E-10 7.5E-15 117.1 2.3 93 624-716 13-107 (467)
205 cd07853 STKc_NLK Catalytic dom 98.9 2.6E-09 5.7E-14 116.2 9.3 90 625-715 1-98 (372)
206 cd06619 PKc_MKK5 Catalytic dom 98.9 4.9E-09 1.1E-13 109.1 11.0 87 625-711 2-90 (279)
207 cd05609 STKc_MAST Catalytic do 98.9 3.7E-09 7.9E-14 111.7 10.1 91 625-715 2-96 (305)
208 cd05078 PTK_Jak2_Jak3_rpt1 Pse 98.9 9.5E-10 2.1E-14 113.1 5.5 87 630-716 1-95 (258)
209 cd05115 PTKc_Zap-70 Catalytic 98.9 3.2E-09 7E-14 109.1 9.4 86 631-717 2-91 (257)
210 cd06626 STKc_MEKK4 Catalytic d 98.9 4E-09 8.7E-14 108.5 10.0 90 626-715 2-94 (264)
211 cd05055 PTKc_PDGFR Catalytic d 98.9 3.6E-09 7.7E-14 111.6 9.8 92 623-714 34-133 (302)
212 cd06652 STKc_MEKK2 Catalytic d 98.9 4E-09 8.7E-14 108.8 9.9 92 624-715 2-101 (265)
213 cd05094 PTKc_TrkC Catalytic do 98.9 3.4E-09 7.3E-14 111.1 9.4 90 625-714 6-101 (291)
214 cd05041 PTKc_Fes_like Catalyti 98.9 3.8E-09 8.2E-14 107.9 9.6 85 630-714 1-86 (251)
215 cd05610 STKc_MASTL Catalytic d 98.9 3.4E-09 7.5E-14 123.6 10.4 92 624-715 4-99 (669)
216 cd05095 PTKc_DDR2 Catalytic do 98.9 3.3E-09 7.2E-14 111.5 9.2 91 624-714 5-113 (296)
217 cd05587 STKc_cPKC Catalytic do 98.9 3.7E-09 7.9E-14 112.7 9.6 92 625-716 1-97 (324)
218 KOG0585 Ca2+/calmodulin-depend 98.9 1.4E-09 3E-14 113.5 6.1 89 622-710 95-200 (576)
219 cd06640 STKc_MST4 Catalytic do 98.9 5.6E-09 1.2E-13 108.6 10.8 90 625-714 5-96 (277)
220 KOG1909 Ran GTPase-activating 98.9 9.7E-11 2.1E-15 117.9 -2.4 192 174-384 88-310 (382)
221 cd05086 PTKc_Aatyk2 Catalytic 98.9 3.1E-09 6.7E-14 110.0 8.6 84 631-714 2-89 (268)
222 cd05615 STKc_cPKC_alpha Cataly 98.9 3.4E-09 7.4E-14 112.9 9.2 92 625-716 1-97 (323)
223 cd06638 STKc_myosinIIIA Cataly 98.9 2.8E-09 6.1E-14 111.3 8.4 99 614-713 8-113 (286)
224 cd05071 PTKc_Src Catalytic dom 98.9 3.6E-09 7.8E-14 109.1 9.1 89 624-714 6-94 (262)
225 cd07872 STKc_PCTAIRE2 Catalyti 98.9 4.5E-09 9.7E-14 111.2 10.0 92 624-716 6-99 (309)
226 cd05056 PTKc_FAK Catalytic dom 98.9 3.3E-09 7.2E-14 109.7 8.8 91 624-715 6-101 (270)
227 cd07859 STKc_TDY_MAPK_plant Ca 98.9 3.4E-09 7.3E-14 113.6 9.1 89 626-715 2-98 (338)
228 cd08221 STKc_Nek9 Catalytic do 98.9 5.4E-09 1.2E-13 107.1 10.3 89 626-714 2-93 (256)
229 cd05608 STKc_GRK1 Catalytic do 98.9 4.1E-09 8.9E-14 109.8 9.4 82 632-713 1-86 (280)
230 cd06651 STKc_MEKK3 Catalytic d 98.9 5.9E-09 1.3E-13 107.6 10.6 92 624-715 2-101 (266)
231 cd05088 PTKc_Tie2 Catalytic do 98.9 4.1E-09 8.8E-14 111.2 9.4 91 624-714 7-102 (303)
232 cd05602 STKc_SGK1 Catalytic do 98.9 4.7E-09 1E-13 112.0 9.8 87 630-716 1-92 (325)
233 cd05630 STKc_GRK6 Catalytic do 98.9 5.7E-09 1.2E-13 109.1 10.2 89 626-714 2-94 (285)
234 cd05073 PTKc_Hck Catalytic dom 98.9 5.8E-09 1.3E-13 107.3 10.1 89 624-714 6-94 (260)
235 cd05079 PTKc_Jak1_rpt2 Catalyt 98.9 4.8E-09 1E-13 109.5 9.5 91 625-715 5-103 (284)
236 KOG0594 Protein kinase PCTAIRE 98.9 1.8E-09 4E-14 109.8 6.1 90 625-715 12-111 (323)
237 cd05057 PTKc_EGFR_like Catalyt 98.9 5.1E-09 1.1E-13 109.0 9.6 92 624-716 7-104 (279)
238 KOG0587 Traf2- and Nck-interac 98.9 3.1E-09 6.6E-14 118.6 8.2 113 615-728 10-130 (953)
239 cd05045 PTKc_RET Catalytic dom 98.9 5.9E-09 1.3E-13 109.2 10.2 89 625-713 1-96 (290)
240 cd07844 STKc_PCTAIRE_like Cata 98.9 4.5E-09 9.8E-14 110.0 9.3 92 624-716 5-98 (291)
241 cd06614 STKc_PAK Catalytic dom 98.9 5.4E-09 1.2E-13 109.2 9.8 93 622-715 17-110 (286)
242 cd07873 STKc_PCTAIRE1 Catalyti 98.9 5.8E-09 1.3E-13 109.9 10.1 91 624-715 6-98 (301)
243 cd05632 STKc_GRK5 Catalytic do 98.9 6.2E-09 1.3E-13 108.8 10.1 89 626-714 2-94 (285)
244 cd08229 STKc_Nek7 Catalytic do 98.9 4.6E-09 1E-13 108.4 9.1 90 624-713 2-95 (267)
245 cd06628 STKc_MAPKKK_Byr2_like 98.9 7E-09 1.5E-13 107.0 10.4 90 626-715 2-101 (267)
246 cd06655 STKc_PAK2 Catalytic do 98.9 6.3E-09 1.4E-13 109.4 10.2 91 624-714 19-110 (296)
247 cd05070 PTKc_Fyn_Yrk Catalytic 98.9 5.2E-09 1.1E-13 107.6 9.3 88 625-714 7-94 (260)
248 cd05098 PTKc_FGFR1 Catalytic d 98.9 5.6E-09 1.2E-13 110.4 9.7 91 624-714 18-118 (307)
249 cd08227 PK_STRAD_alpha Pseudok 98.9 6.4E-09 1.4E-13 111.0 10.3 85 629-713 3-92 (327)
250 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.9 6E-09 1.3E-13 108.7 9.7 89 626-714 6-102 (283)
251 PLN03224 probable serine/threo 98.9 3.4E-09 7.4E-14 117.7 8.2 93 622-714 143-279 (507)
252 cd07841 STKc_CDK7 Catalytic do 98.9 5.1E-09 1.1E-13 110.0 9.1 89 626-715 2-96 (298)
253 cd05048 PTKc_Ror Catalytic Dom 98.9 5.9E-09 1.3E-13 108.7 9.5 90 625-714 6-102 (283)
254 cd06637 STKc_TNIK Catalytic do 98.9 5.2E-09 1.1E-13 108.3 9.0 93 621-714 3-103 (272)
255 cd05616 STKc_cPKC_beta Catalyt 98.9 6.4E-09 1.4E-13 110.8 9.8 92 625-716 1-97 (323)
256 cd05089 PTKc_Tie1 Catalytic do 98.9 6.6E-09 1.4E-13 109.2 9.8 91 624-714 2-97 (297)
257 cd06658 STKc_PAK5 Catalytic do 98.9 2.9E-09 6.3E-14 111.7 6.9 86 629-714 27-113 (292)
258 cd05578 STKc_Yank1 Catalytic d 98.9 2.8E-09 6.2E-14 109.4 6.7 90 625-714 1-94 (258)
259 cd05053 PTKc_FGFR Catalytic do 98.9 5.1E-09 1.1E-13 109.7 8.8 94 621-714 9-110 (293)
260 cd06621 PKc_MAPKK_Pek1_like Ca 98.9 8.9E-09 1.9E-13 107.7 10.5 89 625-713 2-94 (287)
261 cd07847 STKc_CDKL1_4 Catalytic 98.9 6.6E-09 1.4E-13 108.4 9.4 90 625-714 2-94 (286)
262 cd05617 STKc_aPKC_zeta Catalyt 98.9 7.6E-09 1.7E-13 110.4 10.0 86 630-715 1-91 (327)
263 cd06659 STKc_PAK6 Catalytic do 98.9 4.1E-09 8.8E-14 110.9 7.7 86 629-714 26-112 (297)
264 KOG4279 Serine/threonine prote 98.9 1.9E-09 4.2E-14 116.7 5.2 89 630-718 581-670 (1226)
265 cd05607 STKc_GRK7 Catalytic do 98.9 8.9E-09 1.9E-13 107.1 10.2 83 632-714 1-87 (277)
266 cd05620 STKc_nPKC_delta Cataly 98.9 7.1E-09 1.5E-13 110.1 9.6 86 630-715 1-91 (316)
267 cd05613 STKc_MSK1_N N-terminal 98.9 6.4E-09 1.4E-13 108.9 9.2 91 625-715 1-100 (290)
268 cd00192 PTKc Catalytic domain 98.9 6.2E-09 1.3E-13 106.7 8.8 85 630-714 1-90 (262)
269 cd08218 STKc_Nek1 Catalytic do 98.9 8.9E-09 1.9E-13 105.5 10.0 89 626-714 2-93 (256)
270 cd06657 STKc_PAK4 Catalytic do 98.9 6E-09 1.3E-13 109.3 8.8 85 630-714 26-111 (292)
271 cd05035 PTKc_Axl_like Catalyti 98.9 8.3E-09 1.8E-13 106.7 9.7 88 626-713 1-100 (273)
272 cd05043 PTK_Ryk Pseudokinase d 98.9 6.9E-09 1.5E-13 108.0 9.2 92 623-714 5-103 (280)
273 cd06609 STKc_MST3_like Catalyt 98.9 1E-08 2.2E-13 106.3 10.4 90 625-714 2-93 (274)
274 cd05116 PTKc_Syk Catalytic dom 98.9 6.7E-09 1.5E-13 106.6 8.8 84 631-715 2-90 (257)
275 cd06605 PKc_MAPKK Catalytic do 98.9 6.8E-09 1.5E-13 106.9 8.9 90 625-714 2-93 (265)
276 cd05040 PTKc_Ack_like Catalyti 98.9 8.3E-09 1.8E-13 105.8 9.5 85 630-715 1-90 (257)
277 smart00219 TyrKc Tyrosine kina 98.9 6.6E-09 1.4E-13 106.4 8.7 89 627-715 2-96 (258)
278 cd05032 PTKc_InsR_like Catalyt 98.8 7.3E-09 1.6E-13 107.5 9.1 91 624-714 6-103 (277)
279 cd05058 PTKc_Met_Ron Catalytic 98.8 7E-09 1.5E-13 106.7 8.9 86 630-715 1-92 (262)
280 cd08219 STKc_Nek3 Catalytic do 98.8 1.5E-08 3.2E-13 103.9 11.2 89 625-713 1-91 (255)
281 cd07832 STKc_CCRK Catalytic do 98.8 7.1E-09 1.5E-13 108.1 9.1 89 626-715 2-93 (286)
282 cd05101 PTKc_FGFR2 Catalytic d 98.8 8.1E-09 1.8E-13 108.9 9.5 91 624-714 15-115 (304)
283 KOG0607 MAP kinase-interacting 98.8 1.3E-09 2.9E-14 108.1 3.0 102 615-721 74-177 (463)
284 KOG0660 Mitogen-activated prot 98.8 3.7E-09 8E-14 107.4 6.2 93 623-716 21-121 (359)
285 cd05572 STKc_cGK_PKG Catalytic 98.8 9.2E-09 2E-13 105.9 9.4 84 632-715 1-88 (262)
286 KOG1989 ARK protein kinase fam 98.8 4.1E-09 8.8E-14 118.5 7.1 92 623-714 36-136 (738)
287 cd05047 PTKc_Tie Catalytic dom 98.8 1.2E-08 2.6E-13 105.7 10.2 85 630-714 1-90 (270)
288 cd05051 PTKc_DDR Catalytic dom 98.8 1.1E-08 2.3E-13 107.5 9.9 92 624-715 5-114 (296)
289 cd06639 STKc_myosinIIIB Cataly 98.8 1E-08 2.2E-13 107.5 9.5 99 614-713 12-117 (291)
290 cd05060 PTKc_Syk_like Catalyti 98.8 9.3E-09 2E-13 105.5 9.0 85 630-715 1-90 (257)
291 cd08220 STKc_Nek8 Catalytic do 98.8 1.4E-08 3E-13 103.9 10.4 90 625-714 1-93 (256)
292 cd07836 STKc_Pho85 Catalytic d 98.8 1E-08 2.3E-13 106.8 9.5 89 625-714 1-91 (284)
293 cd08225 STKc_Nek5 Catalytic do 98.8 9E-09 2E-13 105.4 8.8 89 626-714 2-93 (257)
294 cd05109 PTKc_HER2 Catalytic do 98.8 9.9E-09 2.1E-13 106.8 9.2 91 624-715 7-103 (279)
295 cd05069 PTKc_Yes Catalytic dom 98.8 1.2E-08 2.5E-13 105.1 9.5 88 625-714 7-94 (260)
296 cd05099 PTKc_FGFR4 Catalytic d 98.8 9E-09 1.9E-13 109.2 8.9 91 624-714 12-112 (314)
297 PHA03212 serine/threonine kina 98.8 9.8E-09 2.1E-13 112.2 9.4 85 624-715 92-177 (391)
298 cd06917 STKc_NAK1_like Catalyt 98.8 1.5E-08 3.3E-13 105.2 10.4 90 625-714 2-96 (277)
299 cd05111 PTK_HER3 Pseudokinase 98.8 7.7E-09 1.7E-13 107.7 8.2 91 625-716 8-104 (279)
300 cd06648 STKc_PAK_II Catalytic 98.8 1.3E-08 2.8E-13 106.3 9.9 89 626-714 21-110 (285)
301 cd06610 STKc_OSR1_SPAK Catalyt 98.8 1.9E-08 4.2E-13 103.5 10.9 90 625-714 2-93 (267)
302 KOG0589 Serine/threonine prote 98.8 3.4E-09 7.4E-14 112.5 5.2 92 624-715 4-99 (426)
303 cd05044 PTKc_c-ros Catalytic d 98.8 6.5E-09 1.4E-13 107.4 7.3 84 630-713 1-92 (269)
304 cd05577 STKc_GRK Catalytic dom 98.8 1.2E-08 2.7E-13 106.0 9.4 84 632-715 1-88 (277)
305 cd05122 PKc_STE Catalytic doma 98.8 2E-08 4.4E-13 102.1 10.7 90 625-714 1-91 (253)
306 cd07870 STKc_PFTAIRE2 Catalyti 98.8 1.2E-08 2.6E-13 106.8 9.1 92 622-714 3-96 (291)
307 cd06653 STKc_MEKK3_like_1 Cata 98.8 1.9E-08 4.2E-13 103.7 10.5 92 624-715 2-101 (264)
308 cd06606 STKc_MAPKKK Catalytic 98.8 1.9E-08 4.1E-13 102.8 10.3 90 626-715 2-96 (260)
309 PTZ00283 serine/threonine prot 98.8 8.1E-09 1.8E-13 116.3 8.2 94 621-714 29-133 (496)
310 cd06607 STKc_TAO Catalytic dom 98.8 1.2E-08 2.5E-13 107.9 8.9 89 624-713 15-107 (307)
311 cd07861 STKc_CDK1_euk Catalyti 98.8 1.7E-08 3.7E-13 105.2 10.1 88 625-713 1-91 (285)
312 KOG4658 Apoptotic ATPase [Sign 98.8 2.2E-09 4.7E-14 126.2 3.6 127 83-212 524-652 (889)
313 cd05574 STKc_phototropin_like 98.8 1.9E-08 4.1E-13 106.7 10.6 90 625-714 2-95 (316)
314 cd05075 PTKc_Axl Catalytic dom 98.8 1.8E-08 4E-13 104.2 10.1 86 627-712 2-98 (272)
315 PF00069 Pkinase: Protein kina 98.8 9.5E-09 2.1E-13 105.4 7.7 87 627-713 2-91 (260)
316 cd06627 STKc_Cdc7_like Catalyt 98.8 2E-08 4.4E-13 102.5 10.1 89 626-714 2-93 (254)
317 cd05586 STKc_Sck1_like Catalyt 98.8 1.4E-08 3E-13 108.6 8.9 85 632-716 1-92 (330)
318 cd05054 PTKc_VEGFR Catalytic d 98.8 1E-08 2.2E-13 110.0 7.6 91 624-714 7-106 (337)
319 cd08528 STKc_Nek10 Catalytic d 98.8 2.3E-08 5.1E-13 103.3 10.1 89 625-713 1-102 (269)
320 PTZ00266 NIMA-related protein 98.8 1.5E-08 3.4E-13 118.8 9.6 92 622-713 11-107 (1021)
321 cd05100 PTKc_FGFR3 Catalytic d 98.8 1.4E-08 3.1E-13 108.6 8.8 90 625-714 13-112 (334)
322 PRK09188 serine/threonine prot 98.8 2.3E-08 5E-13 106.5 10.0 87 620-709 14-107 (365)
323 cd06608 STKc_myosinIII_like Ca 98.8 1.9E-08 4.2E-13 104.0 9.2 91 622-713 4-102 (275)
324 cd05579 STKc_MAST_like Catalyt 98.8 1.4E-08 3.1E-13 104.2 7.9 84 632-715 1-88 (265)
325 cd06635 STKc_TAO1 Catalytic do 98.8 2.6E-08 5.7E-13 105.8 9.9 88 626-714 27-118 (317)
326 cd07833 STKc_CDKL Catalytic do 98.8 1.7E-08 3.6E-13 105.4 8.3 90 625-714 2-94 (288)
327 cd05082 PTKc_Csk Catalytic dom 98.8 2.9E-08 6.2E-13 101.8 9.8 88 625-715 7-95 (256)
328 cd07860 STKc_CDK2_3 Catalytic 98.8 2E-08 4.3E-13 104.7 8.7 89 625-714 1-92 (284)
329 cd06617 PKc_MKK3_6 Catalytic d 98.8 2.4E-08 5.3E-13 103.9 9.3 88 625-713 2-92 (283)
330 cd05091 PTKc_Ror2 Catalytic do 98.8 2E-08 4.3E-13 104.7 8.5 88 626-713 7-101 (283)
331 cd08217 STKc_Nek2 Catalytic do 98.8 2.7E-08 5.9E-13 102.2 9.4 88 626-713 2-94 (265)
332 KOG0200 Fibroblast/platelet-de 98.7 1.6E-08 3.4E-13 116.3 8.1 97 619-715 291-397 (609)
333 cd07843 STKc_CDC2L1 Catalytic 98.7 2.3E-08 4.9E-13 104.9 8.6 92 624-716 5-101 (293)
334 KOG4236 Serine/threonine prote 98.7 1.4E-08 3.1E-13 106.8 6.8 82 629-711 569-653 (888)
335 cd07856 STKc_Sty1_Hog1 Catalyt 98.7 2E-08 4.4E-13 107.2 8.1 96 618-714 4-103 (328)
336 cd05083 PTKc_Chk Catalytic dom 98.7 2.4E-08 5.2E-13 102.3 8.3 86 625-714 7-92 (254)
337 PLN00009 cyclin-dependent kina 98.7 4E-08 8.6E-13 103.1 10.1 90 624-714 2-94 (294)
338 cd05110 PTKc_HER4 Catalytic do 98.7 2E-08 4.3E-13 106.0 7.7 91 624-715 7-103 (303)
339 KOG0694 Serine/threonine prote 98.7 1.1E-08 2.4E-13 111.7 5.8 102 622-725 366-472 (694)
340 cd05581 STKc_PDK1 Catalytic do 98.7 1.7E-08 3.7E-13 104.8 7.0 91 625-715 2-97 (280)
341 cd07876 STKc_JNK2 Catalytic do 98.7 2.6E-08 5.6E-13 107.8 8.7 90 623-713 20-118 (359)
342 KOG4717 Serine/threonine prote 98.7 9.7E-09 2.1E-13 107.8 4.8 90 625-714 19-111 (864)
343 KOG0579 Ste20-like serine/thre 98.7 1.6E-09 3.4E-14 116.1 -1.1 97 630-726 38-135 (1187)
344 cd06636 STKc_MAP4K4_6 Catalyti 98.7 3.5E-08 7.5E-13 102.8 9.0 100 614-714 6-113 (282)
345 PF13855 LRR_8: Leucine rich r 98.7 9.4E-09 2E-13 80.0 3.5 59 107-165 2-60 (61)
346 cd07840 STKc_CDK9_like Catalyt 98.7 3.7E-08 8.1E-13 102.6 9.1 88 626-714 1-93 (287)
347 cd08215 STKc_Nek Catalytic dom 98.7 6.5E-08 1.4E-12 98.9 10.5 90 625-714 1-93 (258)
348 cd07864 STKc_CDK12 Catalytic d 98.7 3.7E-08 7.9E-13 103.7 8.7 92 622-714 5-109 (302)
349 KOG4658 Apoptotic ATPase [Sign 98.7 1.4E-08 3.1E-13 119.5 6.1 107 82-189 545-653 (889)
350 PTZ00024 cyclin-dependent prot 98.7 4.1E-08 8.8E-13 105.2 8.9 87 628-715 13-114 (335)
351 cd07839 STKc_CDK5 Catalytic do 98.7 2.2E-08 4.8E-13 104.4 6.5 88 626-714 2-92 (284)
352 cd05074 PTKc_Tyro3 Catalytic d 98.7 5.7E-08 1.2E-12 100.6 9.5 88 626-713 1-100 (273)
353 cd07831 STKc_MOK Catalytic dom 98.7 5.3E-08 1.2E-12 101.3 9.2 89 626-715 1-94 (282)
354 cd05583 STKc_MSK_N N-terminal 98.7 3.7E-08 8E-13 103.0 8.0 90 626-715 2-100 (288)
355 cd07835 STKc_CDK1_like Catalyt 98.7 5.8E-08 1.3E-12 101.1 9.5 89 626-715 1-92 (283)
356 cd06633 STKc_TAO3 Catalytic do 98.7 8.9E-08 1.9E-12 101.5 11.0 89 626-715 23-115 (313)
357 KOG1859 Leucine-rich repeat pr 98.7 4.8E-10 1E-14 122.1 -6.4 155 171-335 102-268 (1096)
358 PHA03211 serine/threonine kina 98.7 5.3E-08 1.1E-12 108.2 9.3 86 623-715 168-254 (461)
359 PF13855 LRR_8: Leucine rich r 98.7 1.5E-08 3.3E-13 78.8 3.4 57 132-188 3-59 (61)
360 cd08223 STKc_Nek4 Catalytic do 98.7 8.1E-08 1.8E-12 98.4 9.8 90 625-714 1-94 (257)
361 cd08530 STKc_CNK2-like Catalyt 98.7 4.6E-08 1E-12 100.0 7.9 89 625-713 1-92 (256)
362 KOG0666 Cyclin C-dependent kin 98.7 6.5E-09 1.4E-13 103.0 1.3 88 625-713 25-120 (438)
363 smart00221 STYKc Protein kinas 98.7 1.2E-07 2.6E-12 94.7 10.5 90 626-715 1-92 (225)
364 cd06634 STKc_TAO2 Catalytic do 98.7 7.2E-08 1.6E-12 102.0 9.3 88 626-714 17-108 (308)
365 cd08226 PK_STRAD_beta Pseudoki 98.6 9E-08 1.9E-12 102.2 9.9 85 630-714 4-93 (328)
366 PHA03209 serine/threonine kina 98.6 5.1E-08 1.1E-12 105.4 8.1 87 623-716 65-152 (357)
367 cd07842 STKc_CDK8_like Catalyt 98.6 1E-07 2.2E-12 101.0 10.2 86 626-712 2-95 (316)
368 cd05123 STKc_AGC Catalytic dom 98.6 4.7E-08 1E-12 99.7 7.4 84 632-715 1-88 (250)
369 cd07880 STKc_p38gamma_MAPK12 C 98.6 8E-08 1.7E-12 103.3 9.2 91 622-713 13-112 (343)
370 cd07877 STKc_p38alpha_MAPK14 C 98.6 8E-08 1.7E-12 103.4 9.2 99 615-714 8-115 (345)
371 cd07878 STKc_p38beta_MAPK11 Ca 98.6 5E-08 1.1E-12 104.8 7.5 91 623-714 14-113 (343)
372 cd07862 STKc_CDK6 Catalytic do 98.6 1.3E-07 2.8E-12 98.9 10.5 89 625-714 2-102 (290)
373 cd07845 STKc_CDK10 Catalytic d 98.6 9.2E-08 2E-12 101.1 9.3 91 623-714 6-101 (309)
374 PTZ00036 glycogen synthase kin 98.6 8.8E-08 1.9E-12 106.5 9.5 85 623-712 65-158 (440)
375 cd05633 STKc_GRK3 Catalytic do 98.6 1.1E-07 2.5E-12 98.9 9.7 86 631-716 1-93 (279)
376 cd07858 STKc_TEY_MAPK_plant Ca 98.6 5.9E-08 1.3E-12 104.0 7.7 91 624-715 5-103 (337)
377 cd07830 STKc_MAK_like Catalyti 98.6 5E-08 1.1E-12 101.6 6.9 89 626-715 1-92 (283)
378 cd07854 STKc_MAPK4_6 Catalytic 98.6 5.6E-08 1.2E-12 104.5 7.4 89 624-713 5-108 (342)
379 KOG0612 Rho-associated, coiled 98.6 7.4E-09 1.6E-13 118.4 0.4 101 615-715 66-170 (1317)
380 cd07837 STKc_CdkB_plant Cataly 98.6 1.1E-07 2.5E-12 99.6 9.4 89 625-714 2-99 (295)
381 cd07855 STKc_ERK5 Catalytic do 98.6 5.2E-08 1.1E-12 104.4 6.8 92 624-716 5-103 (334)
382 cd05611 STKc_Rim15_like Cataly 98.6 1.3E-07 2.9E-12 97.1 9.6 86 630-715 2-92 (260)
383 cd07865 STKc_CDK9 Catalytic do 98.6 1.1E-07 2.4E-12 100.4 9.2 91 624-715 12-113 (310)
384 cd07874 STKc_JNK3 Catalytic do 98.6 7.2E-08 1.6E-12 104.2 7.9 91 622-713 15-114 (355)
385 KOG0033 Ca2+/calmodulin-depend 98.6 1.5E-09 3.3E-14 104.0 -4.6 91 624-714 11-104 (355)
386 PRK10345 hypothetical protein; 98.6 1.8E-07 3.8E-12 92.2 9.6 87 626-714 4-101 (210)
387 cd07875 STKc_JNK1 Catalytic do 98.6 1E-07 2.2E-12 103.3 8.8 90 623-713 23-121 (364)
388 KOG0599 Phosphorylase kinase g 98.6 1.2E-08 2.6E-13 99.3 1.1 95 625-719 18-122 (411)
389 PHA03390 pk1 serine/threonine- 98.6 1.6E-07 3.5E-12 97.0 9.6 88 623-715 13-104 (267)
390 KOG0576 Mitogen-activated prot 98.6 5.1E-09 1.1E-13 113.4 -2.0 94 622-715 13-107 (829)
391 cd07849 STKc_ERK1_2_like Catal 98.6 1.1E-07 2.4E-12 101.9 8.3 91 623-714 4-101 (336)
392 cd05606 STKc_beta_ARK Catalyti 98.6 1.5E-07 3.2E-12 98.0 8.9 85 631-715 1-92 (278)
393 KOG2345 Serine/threonine prote 98.6 1.9E-08 4.1E-13 96.9 1.9 92 623-714 20-117 (302)
394 cd07852 STKc_MAPK15 Catalytic 98.6 1.1E-07 2.4E-12 101.8 8.0 91 623-714 6-102 (337)
395 PHA03207 serine/threonine kina 98.6 1.5E-07 3.3E-12 103.1 8.9 85 624-714 92-179 (392)
396 cd07867 STKc_CDC2L6 Catalytic 98.6 2.1E-07 4.5E-12 98.8 9.7 81 629-712 6-91 (317)
397 cd07868 STKc_CDK8 Catalytic do 98.6 2.4E-07 5.1E-12 98.4 10.1 81 629-712 6-91 (317)
398 cd08222 STKc_Nek11 Catalytic d 98.6 8.5E-08 1.8E-12 98.5 6.4 88 626-713 2-95 (260)
399 cd07829 STKc_CDK_like Catalyti 98.6 8.3E-08 1.8E-12 99.8 6.4 88 626-714 1-91 (282)
400 cd05118 STKc_CMGC Catalytic do 98.5 1.5E-07 3.3E-12 97.9 7.5 88 627-715 2-92 (283)
401 cd07879 STKc_p38delta_MAPK13 C 98.5 1.8E-07 3.9E-12 100.5 8.3 88 624-712 15-111 (342)
402 cd07834 STKc_MAPK Catalytic do 98.5 1.3E-07 2.8E-12 101.0 7.0 89 626-715 2-98 (330)
403 cd08216 PK_STRAD Pseudokinase 98.5 2.2E-07 4.7E-12 98.5 8.3 84 630-714 8-93 (314)
404 KOG4645 MAPKKK (MAP kinase kin 98.5 1.3E-08 2.9E-13 117.9 -1.1 94 621-714 1232-1328(1509)
405 PTZ00284 protein kinase; Provi 98.5 1.9E-07 4.2E-12 104.7 8.2 96 618-715 123-226 (467)
406 cd07863 STKc_CDK4 Catalytic do 98.5 3.6E-07 7.7E-12 95.4 9.2 88 626-714 2-100 (288)
407 cd06618 PKc_MKK7 Catalytic dom 98.5 3.5E-07 7.5E-12 96.1 8.8 89 624-713 15-106 (296)
408 cd07850 STKc_JNK Catalytic dom 98.5 3.9E-07 8.5E-12 98.3 9.3 91 623-714 15-114 (353)
409 KOG0690 Serine/threonine prote 98.5 4.2E-08 9.1E-13 97.7 1.4 96 624-719 168-267 (516)
410 cd06616 PKc_MKK4 Catalytic dom 98.5 4.7E-07 1E-11 94.5 8.8 84 625-709 5-91 (288)
411 cd07838 STKc_CDK4_6_like Catal 98.5 6.3E-07 1.4E-11 93.3 9.6 88 626-714 1-99 (287)
412 cd07866 STKc_BUR1 Catalytic do 98.4 3.8E-07 8.2E-12 96.3 7.4 92 623-715 7-109 (311)
413 KOG1151 Tousled-like protein k 98.4 8.3E-08 1.8E-12 99.2 1.9 93 626-718 465-566 (775)
414 cd07851 STKc_p38 Catalytic dom 98.4 2.9E-07 6.3E-12 98.9 6.2 91 623-714 14-113 (343)
415 cd00180 PKc Catalytic domain o 98.4 1.6E-06 3.6E-11 84.9 10.5 83 632-714 1-85 (215)
416 cd07857 STKc_MPK1 Catalytic do 98.4 8.5E-07 1.8E-11 94.9 8.9 89 626-715 2-100 (332)
417 cd05147 RIO1_euk RIO kinase fa 98.4 4.2E-07 9.2E-12 88.5 5.8 80 629-710 2-107 (190)
418 KOG0584 Serine/threonine prote 98.4 2.2E-07 4.8E-12 100.8 3.4 101 627-727 43-160 (632)
419 PRK14879 serine/threonine prot 98.3 1.4E-06 3E-11 86.6 8.7 84 630-714 2-93 (211)
420 smart00220 S_TKc Serine/Threon 98.3 1.5E-06 3.4E-11 87.5 9.0 80 636-715 1-82 (244)
421 KOG1152 Signal transduction se 98.3 7.8E-07 1.7E-11 95.3 6.7 95 623-717 560-667 (772)
422 KOG1859 Leucine-rich repeat pr 98.3 1.9E-08 4.1E-13 110.0 -5.8 124 155-286 165-291 (1096)
423 TIGR03724 arch_bud32 Kae1-asso 98.3 1.7E-06 3.7E-11 85.1 8.2 83 631-714 1-91 (199)
424 KOG0667 Dual-specificity tyros 98.3 1.2E-06 2.7E-11 95.8 6.8 88 625-714 187-281 (586)
425 cd05576 STKc_RPK118_like Catal 98.2 1.8E-06 3.9E-11 87.5 6.9 76 635-715 4-80 (237)
426 PRK10359 lipopolysaccharide co 98.2 2.6E-06 5.7E-11 84.4 7.7 88 623-711 30-134 (232)
427 PHA03210 serine/threonine kina 98.2 1.7E-06 3.7E-11 97.8 7.2 90 623-713 147-255 (501)
428 KOG0596 Dual specificity; seri 98.2 1.4E-06 3.1E-11 93.1 5.1 93 624-717 361-456 (677)
429 PRK09605 bifunctional UGMP fam 98.2 4.4E-06 9.6E-11 95.2 9.4 88 624-712 333-428 (535)
430 cd05145 RIO1_like RIO kinase f 98.2 4.4E-06 9.5E-11 81.6 8.1 79 629-709 2-106 (190)
431 KOG0608 Warts/lats-like serine 98.2 9.7E-07 2.1E-11 95.4 3.6 105 622-726 627-735 (1034)
432 COG5238 RNA1 Ran GTPase-activa 98.2 1.1E-07 2.4E-12 92.8 -3.3 138 150-287 88-255 (388)
433 KOG2982 Uncharacterized conser 98.2 3.8E-07 8.1E-12 90.2 0.1 197 84-287 47-262 (418)
434 KOG0195 Integrin-linked kinase 98.2 2.7E-07 5.9E-12 89.9 -1.3 88 629-717 195-284 (448)
435 KOG0986 G protein-coupled rece 98.1 5.8E-07 1.3E-11 93.7 0.5 92 624-715 185-280 (591)
436 KOG1035 eIF-2alpha kinase GCN2 98.1 8.9E-07 1.9E-11 102.7 1.6 79 622-700 477-557 (1351)
437 KOG0669 Cyclin T-dependent kin 98.1 4.7E-08 1E-12 94.2 -7.7 90 626-716 19-119 (376)
438 KOG1006 Mitogen-activated prot 98.1 8.2E-07 1.8E-11 86.6 0.7 80 629-709 69-151 (361)
439 KOG4579 Leucine-rich repeat (L 98.1 1.1E-07 2.5E-12 83.4 -4.7 135 83-221 28-165 (177)
440 KOG1024 Receptor-like protein 98.1 3.5E-06 7.5E-11 86.4 5.0 95 618-712 278-380 (563)
441 KOG4579 Leucine-rich repeat (L 98.1 1.6E-07 3.4E-12 82.6 -4.0 106 156-265 29-137 (177)
442 KOG0696 Serine/threonine prote 98.1 1E-06 2.2E-11 90.7 0.9 102 623-724 348-454 (683)
443 PF08263 LRRNT_2: Leucine rich 98.0 8.1E-06 1.8E-10 58.2 4.3 38 34-73 2-43 (43)
444 KOG2982 Uncharacterized conser 98.0 9.6E-07 2.1E-11 87.4 -0.9 84 153-236 70-156 (418)
445 cd05144 RIO2_C RIO kinase fami 98.0 1.9E-05 4.1E-10 77.7 8.1 84 625-712 16-123 (198)
446 KOG0668 Casein kinase II, alph 97.9 2.6E-06 5.7E-11 81.3 0.2 85 623-710 37-125 (338)
447 KOG2120 SCF ubiquitin ligase, 97.9 1.8E-07 4E-12 92.4 -8.3 138 200-341 208-356 (419)
448 COG5238 RNA1 Ran GTPase-activa 97.9 1E-05 2.3E-10 79.2 3.6 216 126-364 26-286 (388)
449 KOG0695 Serine/threonine prote 97.8 3.8E-06 8.2E-11 84.2 -0.0 100 623-722 249-353 (593)
450 KOG1644 U2-associated snRNP A' 97.8 3E-05 6.5E-10 73.1 5.0 84 179-264 43-126 (233)
451 KOG0604 MAP kinase-activated p 97.7 9.7E-06 2.1E-10 80.6 1.4 82 630-716 68-155 (400)
452 smart00090 RIO RIO-like kinase 97.7 5.1E-05 1.1E-09 76.6 6.5 83 625-711 29-139 (237)
453 PLN03225 Serine/threonine-prot 97.7 4.9E-05 1.1E-09 86.8 7.1 89 622-714 130-229 (566)
454 KOG0664 Nemo-like MAPK-related 97.7 2.4E-06 5.2E-11 83.5 -3.1 88 626-714 55-150 (449)
455 PRK15386 type III secretion pr 97.7 0.00021 4.5E-09 76.3 10.8 57 102-164 48-104 (426)
456 cd05120 APH_ChoK_like Aminogly 97.7 6.7E-05 1.4E-09 69.4 5.9 77 629-708 3-81 (155)
457 KOG1644 U2-associated snRNP A' 97.7 7.7E-05 1.7E-09 70.4 6.0 103 131-235 43-149 (233)
458 KOG1027 Serine/threonine prote 97.6 3.6E-05 7.8E-10 86.5 4.1 85 625-714 510-596 (903)
459 PRK15386 type III secretion pr 97.6 0.00016 3.5E-09 77.1 8.6 130 82-236 52-187 (426)
460 KOG2120 SCF ubiquitin ligase, 97.6 1.1E-06 2.5E-11 86.9 -7.2 176 107-284 186-373 (419)
461 TIGR01982 UbiB 2-polyprenylphe 97.6 8.1E-05 1.8E-09 82.2 5.4 85 629-713 122-251 (437)
462 KOG1167 Serine/threonine prote 97.6 7E-05 1.5E-09 78.1 4.4 92 620-713 32-128 (418)
463 PF12799 LRR_4: Leucine Rich r 97.5 8.2E-05 1.8E-09 53.1 3.4 36 298-334 2-37 (44)
464 PHA02882 putative serine/threo 97.5 0.00026 5.7E-09 74.2 8.8 89 624-713 12-119 (294)
465 KOG1345 Serine/threonine kinas 97.4 0.00011 2.3E-09 72.4 2.8 89 625-714 25-116 (378)
466 KOG0984 Mitogen-activated prot 97.3 0.00014 3.1E-09 68.8 3.1 88 624-712 46-136 (282)
467 PRK12274 serine/threonine prot 97.3 0.0008 1.7E-08 65.6 8.4 80 627-711 5-89 (218)
468 PRK04750 ubiB putative ubiquin 97.3 0.00046 1E-08 77.3 6.9 86 624-710 120-251 (537)
469 KOG0603 Ribosomal protein S6 k 97.3 0.00012 2.6E-09 80.3 2.0 90 624-717 322-413 (612)
470 cd05119 RIO RIO kinase family, 97.3 0.00062 1.4E-08 66.0 6.9 74 629-706 2-101 (187)
471 PF13306 LRR_5: Leucine rich r 97.2 0.00091 2E-08 60.4 6.7 58 102-161 8-65 (129)
472 COG0515 SPS1 Serine/threonine 97.2 0.002 4.2E-08 67.6 10.1 87 626-714 2-92 (384)
473 KOG1290 Serine/threonine prote 97.1 0.0007 1.5E-08 72.0 5.5 89 624-714 78-179 (590)
474 KOG0614 cGMP-dependent protein 97.1 3.7E-05 8E-10 81.6 -3.9 96 624-719 420-519 (732)
475 KOG3665 ZYG-1-like serine/thre 97.1 0.0003 6.5E-09 81.3 3.0 61 200-262 171-231 (699)
476 PF13306 LRR_5: Leucine rich r 97.1 0.0015 3.2E-08 59.0 7.1 123 124-253 6-128 (129)
477 KOG0983 Mitogen-activated prot 97.0 0.00023 5.1E-09 70.1 1.4 84 629-713 97-183 (391)
478 KOG3665 ZYG-1-like serine/thre 97.0 0.00016 3.4E-09 83.6 -0.3 111 153-265 147-264 (699)
479 KOG2739 Leucine-rich acidic nu 96.9 0.00038 8.2E-09 68.7 1.7 39 200-238 63-103 (260)
480 KOG1166 Mitotic checkpoint ser 96.8 0.00075 1.6E-08 79.4 3.5 91 621-714 695-788 (974)
481 PRK01723 3-deoxy-D-manno-octul 96.8 0.0044 9.6E-08 62.7 8.7 85 629-714 36-141 (239)
482 KOG2739 Leucine-rich acidic nu 96.7 0.001 2.2E-08 65.7 2.4 83 81-167 42-129 (260)
483 KOG1163 Casein kinase (serine/ 96.6 0.0038 8.2E-08 60.8 5.9 86 624-712 15-102 (341)
484 cd05154 ACAD10_11_like Acyl-Co 96.5 0.0029 6.3E-08 62.9 4.7 82 630-711 4-91 (223)
485 KOG0671 LAMMER dual specificit 96.3 0.0026 5.5E-08 65.9 2.7 91 623-715 88-185 (415)
486 KOG1164 Casein kinase (serine/ 96.1 0.013 2.7E-07 62.4 7.2 88 625-713 19-113 (322)
487 cd05151 ChoK Choline Kinase (C 95.9 0.011 2.3E-07 56.1 5.2 76 630-709 4-80 (170)
488 KOG2123 Uncharacterized conser 95.9 0.00057 1.2E-08 67.6 -4.0 99 81-184 18-123 (388)
489 KOG1165 Casein kinase (serine/ 95.8 0.013 2.7E-07 59.9 5.2 87 624-713 28-116 (449)
490 KOG2123 Uncharacterized conser 95.4 0.00057 1.2E-08 67.6 -6.0 13 202-214 41-53 (388)
491 COG2112 Predicted Ser/Thr prot 95.1 0.045 9.8E-07 51.4 5.8 79 628-712 26-104 (201)
492 KOG0665 Jun-N-terminal kinase 95.1 0.0057 1.2E-07 62.0 -0.1 82 629-712 22-112 (369)
493 KOG0670 U4/U6-associated splic 94.9 0.02 4.3E-07 61.7 3.2 97 613-713 423-526 (752)
494 KOG4308 LRR-containing protein 94.8 8.3E-05 1.8E-09 82.2 -15.5 182 84-265 89-304 (478)
495 PF00560 LRR_1: Leucine Rich R 93.6 0.03 6.6E-07 33.2 0.9 11 324-334 3-13 (22)
496 PF00560 LRR_1: Leucine Rich R 93.5 0.028 6E-07 33.4 0.6 11 133-143 3-13 (22)
497 PF01102 Glycophorin_A: Glycop 93.4 0.12 2.5E-06 45.6 4.5 34 556-589 60-93 (122)
498 KOG0473 Leucine-rich repeat pr 92.8 0.0035 7.7E-08 60.6 -6.3 88 101-191 37-124 (326)
499 KOG0473 Leucine-rich repeat pr 92.5 0.0018 3.8E-08 62.6 -8.8 83 81-166 41-123 (326)
500 COG0661 AarF Predicted unusual 92.0 0.16 3.5E-06 56.8 4.4 79 632-710 133-256 (517)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.6e-58 Score=559.65 Aligned_cols=347 Identities=34% Similarity=0.539 Sum_probs=267.3
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCCCCCCCC-CCCCCCcceEEcCCCC---------------CC---CCCcceeEEECCCC
Q 004842 32 TDPIEVSALRSIKKSLVDDYSKLSNWNRG-DPCTSNWTGVLCFNTT---------------MD---DGYLHLRELQLLNL 92 (728)
Q Consensus 32 ~~~~~~~~l~~~~~~~~~~~~~l~~w~~~-~~C~~~w~gv~C~~~~---------------~~---~~~~~l~~L~l~~~ 92 (728)
..++|++||+.||+.+.++...+.+|+.. ++| .|.||+|.+.. .+ ..+++|+.|+|++|
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c--~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n 103 (968)
T PLN00113 26 LHAEELELLLSFKSSINDPLKYLSNWNSSADVC--LWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN 103 (968)
T ss_pred CCHHHHHHHHHHHHhCCCCcccCCCCCCCCCCC--cCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCC
Confidence 45689999999999998777778999866 455 79999996421 00 12456666666666
Q ss_pred CCccccCccc-----------------------cCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCcc
Q 004842 93 NLSGNLSPEI-----------------------GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEE 149 (728)
Q Consensus 93 ~l~~~~~~~~-----------------------~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 149 (728)
++++.+|..+ +.+++|++|+|++|.+.+.+|..++++++|++|+|++|.+.+.+|..
T Consensus 104 ~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 183 (968)
T PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNS 183 (968)
T ss_pred ccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChh
Confidence 6665555432 24677888888899998888888999999999999999988888888
Q ss_pred CCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCc
Q 004842 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLL 229 (728)
Q Consensus 150 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 229 (728)
++++++|++|+|++|.+.+.+|..+.++++|++|+|++|.+.+.+|..++.+++|++|++++|++++.+|..++.+++|+
T Consensus 184 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 263 (968)
T PLN00113 184 LTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQ 263 (968)
T ss_pred hhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCC
Confidence 88999999999999998888888888889999999999988888888888888899999988888888888888888888
Q ss_pred EEEcccccCCCCCCcccccCCCCCcEEEccCCcCccCCC-CCCCCCCcCEEEccCCCCcccCCCCCcc-CCccEEEccCC
Q 004842 230 ILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNN 307 (728)
Q Consensus 230 ~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N 307 (728)
+|++++|.+++ .+|..+.++++|+.|++++|.+.+..| .+..+++|+.|++++|.+++.+|..+.. ++|+.|++++|
T Consensus 264 ~L~L~~n~l~~-~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 342 (968)
T PLN00113 264 YLFLYQNKLSG-PIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSN 342 (968)
T ss_pred EEECcCCeeec-cCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCC
Confidence 88888888887 778888888888888888888887777 5777888888888888888777765433 67788888888
Q ss_pred CCCCcCchhccCCccCceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCCcCCC-C-CCCCceEEEcCCCcCC
Q 004842 308 KLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFC 385 (728)
Q Consensus 308 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~ 385 (728)
.+++.+|..+..+++|+.|++++|++++.+|..++ .+++|+.|++++|++++..+. + .+++++.|++++|++.
T Consensus 343 ~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~-----~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~ 417 (968)
T PLN00113 343 KFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLC-----SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFS 417 (968)
T ss_pred CCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHh-----CcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEee
Confidence 88777777777778888888888887777777666 445555555555555543322 1 2444555555555554
Q ss_pred C
Q 004842 386 L 386 (728)
Q Consensus 386 ~ 386 (728)
+
T Consensus 418 ~ 418 (968)
T PLN00113 418 G 418 (968)
T ss_pred e
Confidence 3
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.8e-37 Score=371.60 Aligned_cols=587 Identities=27% Similarity=0.378 Sum_probs=401.1
Q ss_pred CCcceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEE
Q 004842 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (728)
Q Consensus 80 ~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 159 (728)
.+.+|+.|++++|.+.+.+|..++++++|++|+|++|.+.+.+|..++++++|++|+|++|.+++.+|..++++++|++|
T Consensus 162 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 241 (968)
T PLN00113 162 SFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHL 241 (968)
T ss_pred cCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEE
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCC
Q 004842 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (728)
Q Consensus 160 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 239 (728)
++++|.+++.+|..|.++++|++|++++|.+.+.+|..+..+++|++|++++|++++.+|..+..+++|+.|++++|.++
T Consensus 242 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~ 321 (968)
T PLN00113 242 DLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFT 321 (968)
T ss_pred ECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCCCCcEEEccCCcCccCCC-CCCCCCCcCEEEccCCCCcccCCCCCcc-CCccEEEccCCCCCCcCchhc
Q 004842 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNF 317 (728)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~ 317 (728)
+ ..|..+..+++|+.|++++|.+++..| .+..+++|+.|++++|++++.+|..... .+|+.|++++|++.+.+|..+
T Consensus 322 ~-~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~ 400 (968)
T PLN00113 322 G-KIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSL 400 (968)
T ss_pred C-cCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHH
Confidence 8 789999999999999999999998887 7889999999999999999988877554 789999999999999999999
Q ss_pred cCCccCceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCCcCCC--CCCCCceEEEcCCCcCCCCCCcccccC
Q 004842 318 SGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS--FNIPPNVTVRLRGNPFCLNTNAEQFCG 395 (728)
Q Consensus 318 ~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~~~--~~~~~l~~l~l~~N~~~~~~~~~~~~~ 395 (728)
..+++|+.|++++|++++.+|..+. .+++|+.|++++|++++..+. ..+++++.|++++|++.+..+.. + +
T Consensus 401 ~~~~~L~~L~L~~n~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~-~-~ 473 (968)
T PLN00113 401 GACRSLRRVRLQDNSFSGELPSEFT-----KLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDS-F-G 473 (968)
T ss_pred hCCCCCCEEECcCCEeeeECChhHh-----cCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcc-c-c
Confidence 9999999999999999999999887 788999999999999987654 35788899999999887655321 1 1
Q ss_pred CCCCCCcccccCCCCCCCCCCC--CCCCCCccCCCCCCccc-------ccccceeEEEecCCCCcCCCchhhhHhHhhhh
Q 004842 396 SHSDDDNEIDRSTNSTLDCRAQ--SCPTDYEYSPTSPIRCF-------CAAPLLVGYRLKSPGLSYFPAYKNLFEEYMTS 466 (728)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 466 (728)
..... ......+...+..+.. ..+..... ..+.+... ...+.+..+++++|.+++.+|..-.-... -.
T Consensus 474 ~~~L~-~L~ls~n~l~~~~~~~~~~l~~L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~ 550 (968)
T PLN00113 474 SKRLE-NLDLSRNQFSGAVPRKLGSLSELMQL-KLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPV-LS 550 (968)
T ss_pred cccce-EEECcCCccCCccChhhhhhhccCEE-ECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCccc-CC
Confidence 11100 0011112222111110 00000000 00000000 11122344566666666665532100000 12
Q ss_pred cccccccceecccccccCCCceeEEeeccccccCCCCCcceeeccccceecccccc--------eecCCCCCCCCccccc
Q 004842 467 GLKLNLYQLDIDSFRWEKGPRLKMYLKLFPVYDNSSGNSYVFNASEVGRIRSMFTG--------WNIPDSDIFGPYELIN 538 (728)
Q Consensus 467 ~l~l~~n~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~l~~--------~~~~~~~~~g~~~~~~ 538 (728)
.++++.|.+.+..+....+ .+. ...++.+. +.+.+ ..++...+.|+..+|+
T Consensus 551 ~L~Ls~N~l~~~~p~~l~~---------l~~-------L~~l~ls~-----N~l~~~~p~~~~~~~~~~~~~~~n~~lc~ 609 (968)
T PLN00113 551 QLDLSQNQLSGEIPKNLGN---------VES-------LVQVNISH-----NHLHGSLPSTGAFLAINASAVAGNIDLCG 609 (968)
T ss_pred EEECCCCcccccCChhHhc---------Ccc-------cCEEeccC-----CcceeeCCCcchhcccChhhhcCCccccC
Confidence 3556666554322111000 000 00111110 01111 0111222233333332
Q ss_pred ccccCCCCCCCCCCC-C-CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhchhhhhhhcccCCC-cccc---cCCcc
Q 004842 539 FTLQGPYRDVFPPSR-N-SGISKAALAGIILGAIAGAVTISAIVSLLIVRAHMKNYHAISRRRHSSK-TSIK---IDGVR 612 (728)
Q Consensus 539 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~ 612 (728)
.. .....++.. . +......++++++++ +++++++++++++++++++. ...+...... .... .....
T Consensus 610 ~~----~~~~~~~c~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 681 (968)
T PLN00113 610 GD----TTSGLPPCKRVRKTPSWWFYITCTLGA---FLVLALVAFGFVFIRGRNNL-ELKRVENEDGTWELQFFDSKVSK 681 (968)
T ss_pred Cc----cccCCCCCccccccceeeeehhHHHHH---HHHHHHHHHHHHHHHhhhcc-cccccccccccccccccccccch
Confidence 11 000001111 1 111111222222222 11222222222222221111 0110000000 0000 01112
Q ss_pred ccchHHHHhhcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEe
Q 004842 613 SFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (728)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 691 (728)
.++++++. ..+...++||+|+||.||+|+. .+|..||||+++..... ..+|++.+++++|||||+++|+|.+
T Consensus 682 ~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~ 754 (968)
T PLN00113 682 SITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRS 754 (968)
T ss_pred hhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEc
Confidence 24444443 3577788999999999999996 56899999999754322 2356889999999999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhc
Q 004842 692 EGEQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 692 ~~~~~lV~Ey~~~GsL~~~L~~ 713 (728)
.+..++|||||++|+|.++++.
T Consensus 755 ~~~~~lv~Ey~~~g~L~~~l~~ 776 (968)
T PLN00113 755 EKGAYLIHEYIEGKNLSEVLRN 776 (968)
T ss_pred CCCCEEEEeCCCCCcHHHHHhc
Confidence 9999999999999999999975
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.96 E-value=6.9e-31 Score=274.54 Aligned_cols=299 Identities=24% Similarity=0.263 Sum_probs=203.3
Q ss_pred cceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEe
Q 004842 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (728)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (728)
.+++.|+|.+|.|+..-..++..++.|+.||||.|.|+.+.-.+|..-.++++|+|++|.|+..--..|..+.+|..|.|
T Consensus 125 ghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkL 204 (873)
T KOG4194|consen 125 GHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKL 204 (873)
T ss_pred cceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeec
Confidence 45777777777776666667777777888888888877554456666677888888888888777777888888888888
Q ss_pred eccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCC
Q 004842 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (728)
Q Consensus 162 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 241 (728)
+.|+++...+.+|.+|++|+.|+|..|+|.-.--..|.++++|+.|.|..|.+...-...|..+.++++|+|..|+++.
T Consensus 205 srNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~- 283 (873)
T KOG4194|consen 205 SRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA- 283 (873)
T ss_pred ccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh-
Confidence 8888887777788888888888888888764444566777777777777777766656666777777777777777764
Q ss_pred CCcccccCCCCCcEEEccCCcCccCCC-CCCCCCCcCEEEccCCCCcccCCCCCcc--CCccEEEccCCCCCCcCchhcc
Q 004842 242 TIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFS 318 (728)
Q Consensus 242 ~~p~~~~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~N~l~~~~p~~~~ 318 (728)
.-..++-++++|+.|+|++|.+..+.+ .+...++|+.|+|++|+++ .+++..+. ..|++|+|++|.++..-...|.
T Consensus 284 vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~ 362 (873)
T KOG4194|consen 284 VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFV 362 (873)
T ss_pred hhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccc-cCChhHHHHHHHhhhhcccccchHHHHhhHHH
Confidence 334566667777777777777766555 4556677777777777777 45444343 5666666666666655555666
Q ss_pred CCccCceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCCcCC-CC-CCCCceEEEcCCCcC
Q 004842 319 GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG-SF-NIPPNVTVRLRGNPF 384 (728)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~~-~~-~~~~l~~l~l~~N~~ 384 (728)
.+++|+.|||++|.|+..|-+.-... -.++.|+.|+|.+|++..|+. .+ +++.+..|+|.+|++
T Consensus 363 ~lssL~~LdLr~N~ls~~IEDaa~~f--~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Nai 428 (873)
T KOG4194|consen 363 GLSSLHKLDLRSNELSWCIEDAAVAF--NGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAI 428 (873)
T ss_pred HhhhhhhhcCcCCeEEEEEecchhhh--ccchhhhheeecCceeeecchhhhccCcccceecCCCCcc
Confidence 66666666666666665554422111 145666666666666666652 22 466666666666654
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-30 Score=272.77 Aligned_cols=317 Identities=23% Similarity=0.269 Sum_probs=205.1
Q ss_pred CCCCCcceEEcCCCCCCC---------CCcceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCC
Q 004842 62 PCTSNWTGVLCFNTTMDD---------GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSL 132 (728)
Q Consensus 62 ~C~~~w~gv~C~~~~~~~---------~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 132 (728)
+|.|.-.-..|++..+.. -+...+.|++++|.++..-+..|-++++|+++++.+|.++ .+|.......+|
T Consensus 49 ~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl 127 (873)
T KOG4194|consen 49 TCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHL 127 (873)
T ss_pred cCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccce
Confidence 455556666776543211 1346778999999988877777888888888888888887 677755555568
Q ss_pred cEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCC
Q 004842 133 ELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 212 (728)
Q Consensus 133 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 212 (728)
+.|+|.+|.|+..-.+.+..++.|+.|||+.|.|+.+.-..|..-.++++|+|++|.|+..-...|..+.+|..|.|+.|
T Consensus 128 ~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrN 207 (873)
T KOG4194|consen 128 EKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRN 207 (873)
T ss_pred eEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccC
Confidence 88888888887776777777777777777777777666666766677777777777777766677777777777777777
Q ss_pred CCCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEccCCcCccCCC------------------------
Q 004842 213 NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP------------------------ 268 (728)
Q Consensus 213 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~------------------------ 268 (728)
+++...+..|..+++|+.|+|..|+|.- .--..|.++++|+.|.|..|++.....
T Consensus 208 rittLp~r~Fk~L~~L~~LdLnrN~iri-ve~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~ 286 (873)
T KOG4194|consen 208 RITTLPQRSFKRLPKLESLDLNRNRIRI-VEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNE 286 (873)
T ss_pred cccccCHHHhhhcchhhhhhccccceee-ehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhc
Confidence 7776666667777777777777777742 112334555555555555555443332
Q ss_pred -CCCCCCCcCEEEccCCCCcccCCCCC-ccCCccEEEccCCCCCCcCchhccCCccCceeecccccCcccCCcchhhhcc
Q 004842 269 -DLSRIPNLGYLDLSSNQLNGSIPPGR-LSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT 346 (728)
Q Consensus 269 -~l~~l~~L~~L~Ls~N~l~~~ip~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~ 346 (728)
.+.+++.|+.|+||+|.|...-+..+ +.++|+.|+|++|+|+...+.+|..+..|++|+|++|+++..--..|-
T Consensus 287 g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~---- 362 (873)
T KOG4194|consen 287 GWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFV---- 362 (873)
T ss_pred ccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHH----
Confidence 34445555555555555553222221 225566666666666655555566666666666666665522222222
Q ss_pred CCCCCCcEEECcCCcCCCcCCCC-----CCCCceEEEcCCCcCC
Q 004842 347 LNATETFILDFQNNNLTNISGSF-----NIPPNVTVRLRGNPFC 385 (728)
Q Consensus 347 l~~~~L~~L~l~~N~l~~~~~~~-----~~~~l~~l~l~~N~~~ 385 (728)
.+++|+.|||++|.++....+- ++++++.|.+.||++.
T Consensus 363 -~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk 405 (873)
T KOG4194|consen 363 -GLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK 405 (873)
T ss_pred -HhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee
Confidence 4567777777777777654221 4777777888888764
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.94 E-value=6.2e-29 Score=261.13 Aligned_cols=294 Identities=26% Similarity=0.353 Sum_probs=252.7
Q ss_pred CCcceeEEECCCCCCcc-ccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCE
Q 004842 80 GYLHLRELQLLNLNLSG-NLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDR 158 (728)
Q Consensus 80 ~~~~l~~L~l~~~~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 158 (728)
.++.|+.+++..|++.. -+|+.+..+..|+.||||+|++. ..|..+...+++-+|+|++|+|..+....|.+++.|-.
T Consensus 76 ~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLf 154 (1255)
T KOG0444|consen 76 DLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLF 154 (1255)
T ss_pred cchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhh
Confidence 45678888899888843 46888889999999999999998 78999999999999999999998555556789999999
Q ss_pred EEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCC-CCCCcCCCCCCCCcEEEccccc
Q 004842 159 IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT-GYLPPELSELPKLLILQLDNNN 237 (728)
Q Consensus 159 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~L~~N~ 237 (728)
|||++|++. .+|..+..|..|+.|.|++|.+....-..+..+++|+.|.+++.+=+ ..+|.++..+.+|..+|++.|+
T Consensus 155 LDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~ 233 (1255)
T KOG0444|consen 155 LDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENN 233 (1255)
T ss_pred hccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccC
Confidence 999999998 57778889999999999999886554456667788888888886543 5688899999999999999999
Q ss_pred CCCCCCcccccCCCCCcEEEccCCcCccCCCCCCCCCCcCEEEccCCCCcccCCCCCcc-CCccEEEccCCCCC-CcCch
Q 004842 238 FEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLT-GTIPS 315 (728)
Q Consensus 238 l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~-~~~p~ 315 (728)
+. ..|+.+-++++|+.|+|++|+++........+.+|++|+||.|+++ .+|..... +.|+.|.+.+|+++ .-+|.
T Consensus 234 Lp--~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPS 310 (1255)
T KOG0444|consen 234 LP--IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPS 310 (1255)
T ss_pred CC--cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCcc
Confidence 97 6899999999999999999999987777777889999999999999 78876555 78999999999986 35788
Q ss_pred hccCCccCceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCCcCCCC-CCCCceEEEcCCCcC
Q 004842 316 NFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPF 384 (728)
Q Consensus 316 ~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~ 384 (728)
.++.+.+|+.+..++|++. .+|++++ .+..|+.|.|+.|++-.+|..+ -++.+..|++..|+-
T Consensus 311 GIGKL~~Levf~aanN~LE-lVPEglc-----RC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 311 GIGKLIQLEVFHAANNKLE-LVPEGLC-----RCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred chhhhhhhHHHHhhccccc-cCchhhh-----hhHHHHHhcccccceeechhhhhhcCCcceeeccCCcC
Confidence 9999999999999999998 8999998 7788999999999999988776 478888999999974
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.92 E-value=4.8e-28 Score=254.48 Aligned_cols=294 Identities=26% Similarity=0.360 Sum_probs=223.1
Q ss_pred cceeEEECCCCCCccccCccccCCCCCCEEEccCCCCcc-CCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEE
Q 004842 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISG-SIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (728)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (728)
.+|+.|.+.+|++.. +...++.|+.|+.+++.+|++.. -+|..+..+..|..|||++|+++ ..|..+..-+++-.|+
T Consensus 55 qkLEHLs~~HN~L~~-vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLN 132 (1255)
T KOG0444|consen 55 QKLEHLSMAHNQLIS-VHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLN 132 (1255)
T ss_pred hhhhhhhhhhhhhHh-hhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEE
Confidence 456666666666652 33455666677777777776632 35666667777777777777777 6677777777777777
Q ss_pred eeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCC
Q 004842 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (728)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (728)
|++|+|..+....|-+|+-|-.|+|++|++. .+|..+..+..|++|+|++|.+....-..+-.+++|+.|.+++.+-+-
T Consensus 133 LS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl 211 (1255)
T KOG0444|consen 133 LSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTL 211 (1255)
T ss_pred cccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchh
Confidence 7777777555556667777777777777776 445566677777777777777654443444456667777777766554
Q ss_pred CCCcccccCCCCCcEEEccCCcCccCCCCCCCCCCcCEEEccCCCCcccCCCCC-ccCCccEEEccCCCCCCcCchhccC
Q 004842 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGR-LSLNITTIKLSNNKLTGTIPSNFSG 319 (728)
Q Consensus 241 ~~~p~~~~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~ 319 (728)
..+|.++..+.+|..+|++.|.+.-.+..+.++++|+.|+||+|+|+ .+.... ...+|++|+||.|+++ .+|+.++.
T Consensus 212 ~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcK 289 (1255)
T KOG0444|consen 212 DNIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCK 289 (1255)
T ss_pred hcCCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhh
Confidence 46788999999999999999999866558889999999999999998 333221 2278999999999999 78999999
Q ss_pred CccCceeecccccCcc-cCCcchhhhccCCCCCCcEEECcCCcCCCcCCCC-CCCCceEEEcCCCcCC
Q 004842 320 LPRLQRLFIANNSLSG-SIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 385 (728)
Q Consensus 320 l~~L~~L~L~~N~l~~-~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~ 385 (728)
+++|+.|++.+|+++- -||+.++ ++.+|+++...+|++.-+|.++ ..++++.|.|+.|++-
T Consensus 290 L~kL~kLy~n~NkL~FeGiPSGIG-----KL~~Levf~aanN~LElVPEglcRC~kL~kL~L~~NrLi 352 (1255)
T KOG0444|consen 290 LTKLTKLYANNNKLTFEGIPSGIG-----KLIQLEVFHAANNKLELVPEGLCRCVKLQKLKLDHNRLI 352 (1255)
T ss_pred hHHHHHHHhccCcccccCCccchh-----hhhhhHHHHhhccccccCchhhhhhHHHHHhccccccee
Confidence 9999999999999984 5899999 7889999999999999888766 4788999999999873
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.91 E-value=5.3e-27 Score=235.94 Aligned_cols=291 Identities=32% Similarity=0.456 Sum_probs=227.7
Q ss_pred cceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEe
Q 004842 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (728)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (728)
..+..++..+|+++ ..|+.+.++.+|..|++.+|++... |+..-+++.|++||...|.++ .+|..++.+.+|+-|+|
T Consensus 137 ~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l-~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL 213 (565)
T KOG0472|consen 137 LDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKAL-PENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYL 213 (565)
T ss_pred hhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhC-CHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHh
Confidence 35677778888887 5678888888899999999998844 444445899999999888887 78888999999999999
Q ss_pred eccCCCCCCcHhhhccCCCCEEEccCccccccccccc-CCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCC
Q 004842 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPEL-SRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (728)
Q Consensus 162 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (728)
..|+|. ..| .|.+++.|+.|+++.|+|. .+|++. ..+++|..|||..|+++ +.|+++..+.+|+.||+++|.++
T Consensus 214 ~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is- 288 (565)
T KOG0472|consen 214 RRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS- 288 (565)
T ss_pred hhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-
Confidence 999988 556 7889999999999999987 455554 58999999999999998 78999999999999999999998
Q ss_pred CCCcccccCCCCCcEEEccCCcCccC--------------------------------------C----CCCCCCCC---
Q 004842 241 TTIPASYSNMSKLLKLSLRNCSLQGP--------------------------------------M----PDLSRIPN--- 275 (728)
Q Consensus 241 ~~~p~~~~~l~~L~~L~L~~n~l~~~--------------------------------------~----~~l~~l~~--- 275 (728)
.+|.+++++ .|+.|.+.+|.+..+ + |+...+-+
T Consensus 289 -~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tki 366 (565)
T KOG0472|consen 289 -SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKI 366 (565)
T ss_pred -cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhh
Confidence 478899999 899999999977410 0 00001112
Q ss_pred -----------------------cCEEEccCCCCcccCCCC------------------------Ccc-CCccEEEccCC
Q 004842 276 -----------------------LGYLDLSSNQLNGSIPPG------------------------RLS-LNITTIKLSNN 307 (728)
Q Consensus 276 -----------------------L~~L~Ls~N~l~~~ip~~------------------------~~~-~~L~~L~Ls~N 307 (728)
.+..+++.|++. ++|.. ... ++|+.|+|++|
T Consensus 367 L~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN 445 (565)
T KOG0472|consen 367 LDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNN 445 (565)
T ss_pred hcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccc
Confidence 334555666554 34431 011 57889999999
Q ss_pred CCCCcCchhccCCccCceeecccccCcccCCcchhhhc-------------------cCCCCCCcEEECcCCcCCCcCCC
Q 004842 308 KLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSR-------------------TLNATETFILDFQNNNLTNISGS 368 (728)
Q Consensus 308 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~-------------------~l~~~~L~~L~l~~N~l~~~~~~ 368 (728)
.+. .+|..++.+..||.|+++.|+|. .+|..+.... ..++.+|..|||.+|.+..+|+.
T Consensus 446 ~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~ 523 (565)
T KOG0472|consen 446 LLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPI 523 (565)
T ss_pred hhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChh
Confidence 888 67888888989999999999887 6776654321 12578899999999999999988
Q ss_pred CC-CCCceEEEcCCCcCC
Q 004842 369 FN-IPPNVTVRLRGNPFC 385 (728)
Q Consensus 369 ~~-~~~l~~l~l~~N~~~ 385 (728)
++ +.++++|.+.||||.
T Consensus 524 LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 524 LGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hccccceeEEEecCCccC
Confidence 84 788999999999986
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.89 E-value=6.2e-26 Score=228.25 Aligned_cols=263 Identities=25% Similarity=0.388 Sum_probs=159.4
Q ss_pred eeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeec
Q 004842 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ 163 (728)
Q Consensus 84 l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 163 (728)
++.+.+++|++.. +.+.+.++..|++|++.+|++. ..|.+++.+..++.|+.++|+++ .+|+.++.+.+|..|+.++
T Consensus 47 l~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 4556666666652 3445666666666666666666 55666666666666666666666 5666666666666666666
Q ss_pred cCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCCC
Q 004842 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (728)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 243 (728)
|.+. ..|+.++.+..|+.++..+|++. ..|+.+..+.+|..+++.+|+++...|+.+. ++.|+.||...|.+
T Consensus 124 n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L----- 195 (565)
T KOG0472|consen 124 NELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLL----- 195 (565)
T ss_pred ccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhh-----
Confidence 6665 44555555555555555555555 3344455555555555555555533333222 55555555555554
Q ss_pred cccccCCCCCcEEEccCCcCccCCCCCCCCCCcCEEEccCCCCcccCCCCCccCCccEEEccCCCCCCcCchhccCCccC
Q 004842 244 PASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRL 323 (728)
Q Consensus 244 p~~~~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L 323 (728)
+..+|.++.+.+|+.|||..|++. .+|+......|.+|+++.|+|+-...+....++++
T Consensus 196 --------------------~tlP~~lg~l~~L~~LyL~~Nki~-~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l 254 (565)
T KOG0472|consen 196 --------------------ETLPPELGGLESLELLYLRRNKIR-FLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSL 254 (565)
T ss_pred --------------------hcCChhhcchhhhHHHHhhhcccc-cCCCCCccHHHHHHHhcccHHHhhHHHHhcccccc
Confidence 444444444555555555555554 44432222455556666666653323334477888
Q ss_pred ceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCCcCCCCCCCCceEEEcCCCcC
Q 004842 324 QRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPF 384 (728)
Q Consensus 324 ~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~~ 384 (728)
..|||..|+++ +.|..++ .+.+|..||+|+|.++++|..++.-.++.|.+.|||+
T Consensus 255 ~vLDLRdNklk-e~Pde~c-----lLrsL~rLDlSNN~is~Lp~sLgnlhL~~L~leGNPl 309 (565)
T KOG0472|consen 255 LVLDLRDNKLK-EVPDEIC-----LLRSLERLDLSNNDISSLPYSLGNLHLKFLALEGNPL 309 (565)
T ss_pred eeeeccccccc-cCchHHH-----HhhhhhhhcccCCccccCCcccccceeeehhhcCCch
Confidence 88888888887 7888877 5667778888888888888777655777888888887
No 9
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.86 E-value=4.8e-21 Score=218.46 Aligned_cols=259 Identities=27% Similarity=0.336 Sum_probs=205.4
Q ss_pred ceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEee
Q 004842 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (728)
Q Consensus 83 ~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 162 (728)
.-..|+++.++++ .+|+.+. ++|+.|++++|+++ .+|.. +++|++|+|++|+++ .+|.. .++|+.|+++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 3567899999998 5787775 48999999999999 46653 588999999999999 45643 4689999999
Q ss_pred ccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCC
Q 004842 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (728)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 242 (728)
+|.++. +|..+ .+|+.|++++|+++. +|. .+++|+.|++++|++++ +|.. ..+|+.|++++|++++
T Consensus 271 ~N~L~~-Lp~lp---~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-- 336 (788)
T PRK15387 271 SNPLTH-LPALP---SGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-- 336 (788)
T ss_pred CCchhh-hhhch---hhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccccccCcccc--
Confidence 999884 44433 578899999999984 443 24789999999999985 4542 3468889999999974
Q ss_pred CcccccCCCCCcEEEccCCcCccCCCCCCCCCCcCEEEccCCCCcccCCCCCccCCccEEEccCCCCCCcCchhccCCcc
Q 004842 243 IPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPR 322 (728)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 322 (728)
+|.. ..+|+.|+|++|+|++.++. .++|+.|++++|+++ .+|.. ..+|+.|++++|+|++ +|.. .++
T Consensus 337 LP~l---p~~Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~-~LP~l--~~~L~~LdLs~N~Lt~-LP~l---~s~ 403 (788)
T PRK15387 337 LPTL---PSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-SLPAL--PSGLKELIVSGNRLTS-LPVL---PSE 403 (788)
T ss_pred cccc---ccccceEecCCCccCCCCCC---Ccccceehhhccccc-cCccc--ccccceEEecCCcccC-CCCc---ccC
Confidence 5642 25799999999999975542 357889999999998 57753 3689999999999995 4543 368
Q ss_pred CceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCCcCCCC-CCCCceEEEcCCCcCCCCC
Q 004842 323 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLNT 388 (728)
Q Consensus 323 L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~~~ 388 (728)
|+.|++++|+|+ .+|... .+|+.|++++|+|+.+|..+ .++.+..|+|++|+|++..
T Consensus 404 L~~LdLS~N~Ls-sIP~l~--------~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls~~~ 461 (788)
T PRK15387 404 LKELMVSGNRLT-SLPMLP--------SGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERT 461 (788)
T ss_pred CCEEEccCCcCC-CCCcch--------hhhhhhhhccCcccccChHHhhccCCCeEECCCCCCCchH
Confidence 999999999998 577543 35778999999999988765 4788999999999998764
No 10
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=1.3e-20 Score=216.49 Aligned_cols=318 Identities=22% Similarity=0.342 Sum_probs=231.1
Q ss_pred ccCCCCCCHHHHHHHHHHHHhCCCCCCCCCC----CCCC-CCCCCCc--------------ceEEcCCCCCCCCCcceeE
Q 004842 26 ADDDSITDPIEVSALRSIKKSLVDDYSKLSN----WNRG-DPCTSNW--------------TGVLCFNTTMDDGYLHLRE 86 (728)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~----w~~~-~~C~~~w--------------~gv~C~~~~~~~~~~~l~~ 86 (728)
+++...+.++|.+.+.++.+.+.-|. .+.+ |.+. ++|...= .-|.|.. ..++.
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~l~~p~-~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~-------~~vt~ 125 (754)
T PRK15370 54 CHPPETASPEEIKSKFECLRMLAFPA-YADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGG-------KSVTY 125 (754)
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcCCc-hhhccccccCCCCcccccCCcchhhheeeecCCceEEecCC-------Ccccc
Confidence 45677788999999999999997653 3344 8765 6785322 1255643 34444
Q ss_pred EECCCCCCccc--------------------cC--------ccc-----cCCCCCCEEEccCCCCccCCCccccCCCCCc
Q 004842 87 LQLLNLNLSGN--------------------LS--------PEI-----GRLSYLTILDFMWNKISGSIPKEIGNIKSLE 133 (728)
Q Consensus 87 L~l~~~~l~~~--------------------~~--------~~~-----~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 133 (728)
+.+.+...... .+ ..+ +-..+.+.|++++++++ .+|..+. +.|+
T Consensus 126 l~~~g~~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~ 202 (754)
T PRK15370 126 TRVTESEQASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQIT 202 (754)
T ss_pred cccccccccccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCc
Confidence 44433211100 00 001 11245788999999988 5676553 5799
Q ss_pred EEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCC
Q 004842 134 LLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNN 213 (728)
Q Consensus 134 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 213 (728)
.|+|++|+++ .+|..+. ++|++|++++|+++. +|..+. .+|+.|+|++|.+. .+|..+. ++|+.|++++|+
T Consensus 203 ~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~ 273 (754)
T PRK15370 203 TLILDNNELK-SLPENLQ--GNIKTLYANSNQLTS-IPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNK 273 (754)
T ss_pred EEEecCCCCC-cCChhhc--cCCCEEECCCCcccc-CChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCc
Confidence 9999999998 5666554 589999999999984 566554 47999999999988 5566554 589999999999
Q ss_pred CCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEccCCcCccCCCCCCCCCCcCEEEccCCCCcccCCCC
Q 004842 214 LTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPG 293 (728)
Q Consensus 214 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~ 293 (728)
++ .+|+.+. ++|+.|++++|++++ +|..+. ++|+.|++++|+++..+..+ .++|+.|++++|.++ .+|..
T Consensus 274 L~-~LP~~l~--~sL~~L~Ls~N~Lt~--LP~~lp--~sL~~L~Ls~N~Lt~LP~~l--~~sL~~L~Ls~N~Lt-~LP~~ 343 (754)
T PRK15370 274 IS-CLPENLP--EELRYLSVYDNSIRT--LPAHLP--SGITHLNVQSNSLTALPETL--PPGLKTLEAGENALT-SLPAS 343 (754)
T ss_pred cC-ccccccC--CCCcEEECCCCcccc--Ccccch--hhHHHHHhcCCccccCCccc--cccceeccccCCccc-cCChh
Confidence 98 4676554 589999999999974 565443 47899999999998654433 268999999999998 47764
Q ss_pred CccCCccEEEccCCCCCCcCchhccCCccCceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCCcCCCC----
Q 004842 294 RLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF---- 369 (728)
Q Consensus 294 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~~~~---- 369 (728)
+.++|+.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ..|+.|++++|+|+.+|..+
T Consensus 344 -l~~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~-------~sL~~LdLs~N~L~~LP~sl~~~~ 411 (754)
T PRK15370 344 -LPPELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP-------AALQIMQASRNNLVRLPESLPHFR 411 (754)
T ss_pred -hcCcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH-------HHHHHHhhccCCcccCchhHHHHh
Confidence 3478999999999998 4666553 68999999999998 6787664 35888999999999887543
Q ss_pred -CCCCceEEEcCCCcCC
Q 004842 370 -NIPPNVTVRLRGNPFC 385 (728)
Q Consensus 370 -~~~~l~~l~l~~N~~~ 385 (728)
..+.+..+++.+|++.
T Consensus 412 ~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 412 GEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hcCCCccEEEeeCCCcc
Confidence 2467788999999986
No 11
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.85 E-value=1.1e-23 Score=212.02 Aligned_cols=312 Identities=22% Similarity=0.244 Sum_probs=173.8
Q ss_pred CCCCCCCc---ceEEcCCCCC---CCC-CcceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCC
Q 004842 60 GDPCTSNW---TGVLCFNTTM---DDG-YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSL 132 (728)
Q Consensus 60 ~~~C~~~w---~gv~C~~~~~---~~~-~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 132 (728)
.-||.|+- .-|.|....+ |.. ....+.|+|..|.|+...+.+|+.+++|+.||||+|+|+.+-|.+|..+++|
T Consensus 38 P~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l 117 (498)
T KOG4237|consen 38 PAPCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASL 117 (498)
T ss_pred CCCcccCCCCCceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhh
Confidence 35777755 4578866532 111 1244556666666665555556666666666666666665556666666655
Q ss_pred cEEeccC-CcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcC
Q 004842 133 ELLLLNG-NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 211 (728)
Q Consensus 133 ~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 211 (728)
..|.+.+ |+|+....+.|++|..|+.|.+.-|++.-+..+.|..|++|..|.+.+|.+...-...|..+..++++.+..
T Consensus 118 ~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~ 197 (498)
T KOG4237|consen 118 LSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQ 197 (498)
T ss_pred hHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhc
Confidence 5554444 555544444555566666666666665555555566666666565555555533333555555555555555
Q ss_pred CCCCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEccCCcCccCCC-C-CCCCCCcCEEEccCCCCccc
Q 004842 212 NNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-D-LSRIPNLGYLDLSSNQLNGS 289 (728)
Q Consensus 212 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~-l~~l~~L~~L~Ls~N~l~~~ 289 (728)
|.+-. ..+++.+.... . ..|.+++...-..-..+.++++....+ . ...+..+..-..+.+...+.
T Consensus 198 np~ic-----dCnL~wla~~~-a-------~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~ 264 (498)
T KOG4237|consen 198 NPFIC-----DCNLPWLADDL-A-------MNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSI 264 (498)
T ss_pred Ccccc-----ccccchhhhHH-h-------hchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCc
Confidence 54221 11111111100 0 112233333333333444444433333 1 11111221112222323334
Q ss_pred CCCCCcc--CCccEEEccCCCCCCcCchhccCCccCceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCCcCC
Q 004842 290 IPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG 367 (728)
Q Consensus 290 ip~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~~ 367 (728)
.|...+. ++|++|+|++|+|+++-+.+|.++..++.|+|..|+|. .+-...+. ++..|+.|+|++|+|+.+.+
T Consensus 265 cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~-~v~~~~f~----~ls~L~tL~L~~N~it~~~~ 339 (498)
T KOG4237|consen 265 CPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLE-FVSSGMFQ----GLSGLKTLSLYDNQITTVAP 339 (498)
T ss_pred ChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHH-HHHHHhhh----ccccceeeeecCCeeEEEec
Confidence 4443333 67788888888888787888888888888888888887 33333332 67888888888888887765
Q ss_pred CC--CCCCceEEEcCCCcCCCCCC
Q 004842 368 SF--NIPPNVTVRLRGNPFCLNTN 389 (728)
Q Consensus 368 ~~--~~~~l~~l~l~~N~~~~~~~ 389 (728)
.. .+..+.+|.|-+|||+|+|.
T Consensus 340 ~aF~~~~~l~~l~l~~Np~~CnC~ 363 (498)
T KOG4237|consen 340 GAFQTLFSLSTLNLLSNPFNCNCR 363 (498)
T ss_pred ccccccceeeeeehccCcccCccc
Confidence 43 36678899999999999985
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.84 E-value=2.2e-19 Score=220.16 Aligned_cols=278 Identities=19% Similarity=0.241 Sum_probs=160.0
Q ss_pred eeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeec
Q 004842 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ 163 (728)
Q Consensus 84 l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 163 (728)
++.|++.++.+. .+|..| ...+|+.|+|++|++. .+|..+..+++|+.|+|++|.....+|+ +..+++|++|+|++
T Consensus 591 Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~ 666 (1153)
T PLN03210 591 LRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSD 666 (1153)
T ss_pred cEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecC
Confidence 444444444442 334444 3566777777777766 4566667777777777776654445553 66677777777777
Q ss_pred cCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCCC
Q 004842 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (728)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 243 (728)
|.....+|..+.++++|+.|++++|.....+|..+ ++++|+.|++++|.....+|.. .++|++|++++|.+. .+
T Consensus 667 c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~--~l 740 (1153)
T PLN03210 667 CSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE--EF 740 (1153)
T ss_pred CCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc--cc
Confidence 76666677777777777777777765444555544 5677777777777554444432 346677777777765 45
Q ss_pred cccccCCCCCcEEEccCCcCccC-------CC-CCCCCCCcCEEEccCCCCcccCCCCCcc-CCccEEEccCCCCCCcCc
Q 004842 244 PASYSNMSKLLKLSLRNCSLQGP-------MP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIP 314 (728)
Q Consensus 244 p~~~~~l~~L~~L~L~~n~l~~~-------~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p 314 (728)
|..+ .+++|+.|.+.++..... .+ .....++|+.|++++|...+.+|..+.. ++|+.|++++|...+.+|
T Consensus 741 P~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP 819 (1153)
T PLN03210 741 PSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLP 819 (1153)
T ss_pred cccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeC
Confidence 5433 344455554444221110 01 1112345666666666655556654333 566666666654444455
Q ss_pred hhccCCccCceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCCcCCCC-CCCCceEEEcCC
Q 004842 315 SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRG 381 (728)
Q Consensus 315 ~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~ 381 (728)
..+ .+++|+.|++++|.....+|.. ..+|+.|+|++|.++.+|..+ .++++..|++++
T Consensus 820 ~~~-~L~sL~~L~Ls~c~~L~~~p~~--------~~nL~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 820 TGI-NLESLESLDLSGCSRLRTFPDI--------STNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred CCC-CccccCEEECCCCCcccccccc--------ccccCEeECCCCCCccChHHHhcCCCCCEEECCC
Confidence 444 5666666666665444344432 235566666666666655433 355566666665
No 13
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=1.7e-20 Score=200.00 Aligned_cols=107 Identities=59% Similarity=0.985 Sum_probs=97.3
Q ss_pred CccccchHHHHhhcCCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEE
Q 004842 610 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689 (728)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~ 689 (728)
..+.|+++++..+|++|...++||+|+||.||+|.+++|+.||||++.....+..++|.+|++++++++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999988765433156799999999999999999999999
Q ss_pred EeCC-eEEEEEecCCCCCHHHHHhcCCC
Q 004842 690 DEEG-EQMLVYEFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 690 ~~~~-~~~lV~Ey~~~GsL~~~L~~~~~ 716 (728)
.+.+ +.+||||||+||+|.++|+.+..
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~ 168 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKG 168 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCC
Confidence 9988 59999999999999999998764
No 14
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.82 E-value=6.8e-20 Score=210.45 Aligned_cols=252 Identities=26% Similarity=0.408 Sum_probs=202.3
Q ss_pred cceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEe
Q 004842 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (728)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (728)
.+.+.|++++++++. +|..+. +.|+.|+|++|+++ .+|..+. ++|++|++++|+++ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 467889999999884 566554 57999999999999 5676654 58999999999998 5676553 57999999
Q ss_pred eccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCC
Q 004842 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (728)
Q Consensus 162 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 241 (728)
++|.+. .+|..+. ++|+.|++++|++.. +|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|.++.
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~- 318 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA- 318 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-
Confidence 999998 5677664 589999999999984 676654 589999999999995 555443 579999999999984
Q ss_pred CCcccccCCCCCcEEEccCCcCccCCCCCCCCCCcCEEEccCCCCcccCCCCCccCCccEEEccCCCCCCcCchhccCCc
Q 004842 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (728)
Q Consensus 242 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (728)
+|..+ .++|+.|++++|.+++.+..+. ++|+.|++++|+++ .+|.. +..+|+.|+|++|+|+. +|..+. .
T Consensus 319 -LP~~l--~~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L~-~LP~~-lp~~L~~LdLs~N~Lt~-LP~~l~--~ 388 (754)
T PRK15370 319 -LPETL--PPGLKTLEAGENALTSLPASLP--PELQVLDVSKNQIT-VLPET-LPPTITTLDVSRNALTN-LPENLP--A 388 (754)
T ss_pred -CCccc--cccceeccccCCccccCChhhc--CcccEEECCCCCCC-cCChh-hcCCcCEEECCCCcCCC-CCHhHH--H
Confidence 56544 3689999999999997554443 79999999999998 67764 34789999999999995 565554 4
Q ss_pred cCceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCC
Q 004842 322 RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364 (728)
Q Consensus 322 ~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~ 364 (728)
.|+.|++++|+|+ .+|..+..... ..+++..|++.+|.++.
T Consensus 389 sL~~LdLs~N~L~-~LP~sl~~~~~-~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 389 ALQIMQASRNNLV-RLPESLPHFRG-EGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHHhhccCCcc-cCchhHHHHhh-cCCCccEEEeeCCCccH
Confidence 7999999999998 77876653322 45788999999999973
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.82 E-value=4.3e-22 Score=219.77 Aligned_cols=280 Identities=31% Similarity=0.445 Sum_probs=202.1
Q ss_pred eeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCC--------------------CCCcEEeccCCcCC
Q 004842 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNI--------------------KSLELLLLNGNELT 143 (728)
Q Consensus 84 l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l--------------------~~L~~L~L~~N~l~ 143 (728)
++.+++..+.+.+.++..+.+++. .|||.+|.+... .+.++ ++|+.|+.++|.++
T Consensus 158 ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~---dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~ 232 (1081)
T KOG0618|consen 158 IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVL---DLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLT 232 (1081)
T ss_pred chhhhhhhhhcccchhcchhhhhe--eeecccchhhhh---hhhhccchhhhhhhhcccceEEecCcchheeeeccCcce
Confidence 566666666666666666666555 566666666511 12222 34444555555544
Q ss_pred CcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCC
Q 004842 144 GSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELS 223 (728)
Q Consensus 144 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 223 (728)
...+ -..-.+|++++++.|++++ +|+++..+.+|+.++..+|++. .+|..+..+++|+.|++..|.+. .+|+...
T Consensus 233 ~~~~--~p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le 307 (1081)
T KOG0618|consen 233 TLDV--HPVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLE 307 (1081)
T ss_pred eecc--ccccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCccc
Confidence 1111 1123467888888888874 4588888888888888888884 56777777778888888888777 5666677
Q ss_pred CCCCCcEEEcccccCCCCCCcccc--------------------------cCCCCCcEEEccCCcCccC-CCCCCCCCCc
Q 004842 224 ELPKLLILQLDNNNFEGTTIPASY--------------------------SNMSKLLKLSLRNCSLQGP-MPDLSRIPNL 276 (728)
Q Consensus 224 ~l~~L~~L~L~~N~l~~~~~p~~~--------------------------~~l~~L~~L~L~~n~l~~~-~~~l~~l~~L 276 (728)
.++.|++|+|..|++. .+|..+ ..++.|+.|++.+|.+++. .|.+.++.+|
T Consensus 308 ~~~sL~tLdL~~N~L~--~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hL 385 (1081)
T KOG0618|consen 308 GLKSLRTLDLQSNNLP--SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHL 385 (1081)
T ss_pred ccceeeeeeehhcccc--ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccce
Confidence 7778888888887775 333311 1234578888888888864 4577888999
Q ss_pred CEEEccCCCCcccCCCCCcc--CCccEEEccCCCCCCcCchhccCCccCceeecccccCcccCCcchhhhccCCCCCCcE
Q 004842 277 GYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFI 354 (728)
Q Consensus 277 ~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~ 354 (728)
+.|+|++|++. .+|...+. ..|+.|+||+|+++ .+|+.+..++.|++|...+|+|. ..| .+. .++.|+.
T Consensus 386 KVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~-----~l~qL~~ 456 (1081)
T KOG0618|consen 386 KVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELA-----QLPQLKV 456 (1081)
T ss_pred eeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhh-----hcCcceE
Confidence 99999999998 78877555 68899999999998 67789999999999999999998 777 555 7899999
Q ss_pred EECcCCcCCCcC--CCCCCCCceEEEcCCCcC
Q 004842 355 LDFQNNNLTNIS--GSFNIPPNVTVRLRGNPF 384 (728)
Q Consensus 355 L~l~~N~l~~~~--~~~~~~~l~~l~l~~N~~ 384 (728)
+|++.|+|+.+. .....++++.|+++||.+
T Consensus 457 lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 457 LDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred EecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 999999999764 233348899999999985
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.82 E-value=2e-19 Score=205.27 Aligned_cols=240 Identities=25% Similarity=0.312 Sum_probs=192.3
Q ss_pred cceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEe
Q 004842 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (728)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (728)
.+++.|++.+|+++. +|. .+++|++|+|++|+++ .+|.. .++|+.|++++|.++ .+|.. .++|+.|++
T Consensus 222 ~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~l---p~~L~~L~L 289 (788)
T PRK15387 222 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPAL---PSGLCKLWI 289 (788)
T ss_pred cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hhhhc---hhhcCEEEC
Confidence 478999999999985 453 3588999999999999 45653 468999999999998 45543 367899999
Q ss_pred eccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCC
Q 004842 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (728)
Q Consensus 162 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 241 (728)
++|+++. +|. .+++|+.|++++|++++ +|.. ..+|+.|++++|++++ +|.. ..+|+.|+|++|+|++
T Consensus 290 s~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~- 356 (788)
T PRK15387 290 FGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS- 356 (788)
T ss_pred cCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccccccCcccc-cccc---ccccceEecCCCccCC-
Confidence 9999985 454 24789999999999986 3432 2468889999999984 5542 2589999999999984
Q ss_pred CCcccccCCCCCcEEEccCCcCccCCCCCCCCCCcCEEEccCCCCcccCCCCCccCCccEEEccCCCCCCcCchhccCCc
Q 004842 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (728)
Q Consensus 242 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (728)
+|.. ..+|+.|++++|+++..+.. ..+|+.|++++|+++ .+|.. ..+|+.|++++|+|++ +|.. ..
T Consensus 357 -LP~l---p~~L~~L~Ls~N~L~~LP~l---~~~L~~LdLs~N~Lt-~LP~l--~s~L~~LdLS~N~Lss-IP~l---~~ 422 (788)
T PRK15387 357 -LPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLT-SLPVL--PSELKELMVSGNRLTS-LPML---PS 422 (788)
T ss_pred -CCCC---CcccceehhhccccccCccc---ccccceEEecCCccc-CCCCc--ccCCCEEEccCCcCCC-CCcc---hh
Confidence 5653 35788999999999964432 357999999999999 57653 3689999999999995 5653 35
Q ss_pred cCceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCCcC
Q 004842 322 RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS 366 (728)
Q Consensus 322 ~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~ 366 (728)
+|+.|++++|+|+ .+|..++ .+++|..|+|++|+|++..
T Consensus 423 ~L~~L~Ls~NqLt-~LP~sl~-----~L~~L~~LdLs~N~Ls~~~ 461 (788)
T PRK15387 423 GLLSLSVYRNQLT-RLPESLI-----HLSSETTVNLEGNPLSERT 461 (788)
T ss_pred hhhhhhhccCccc-ccChHHh-----hccCCCeEECCCCCCCchH
Confidence 7889999999998 8999988 7889999999999999753
No 17
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.81 E-value=7.4e-19 Score=215.47 Aligned_cols=286 Identities=21% Similarity=0.236 Sum_probs=222.1
Q ss_pred CcceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEE
Q 004842 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (728)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (728)
+.+|+.|++.++.+. .++..+..+++|+.|+|+++.....+|. ++.+++|++|+|++|.....+|..+.++++|+.|+
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 468999999999987 4677888999999999999876667775 88999999999999987779999999999999999
Q ss_pred eeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCC
Q 004842 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (728)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 240 (728)
+++|.....+|..+ ++++|+.|++++|.....+|.. .++|++|++++|.++ .+|..+ .+++|+.|++.++....
T Consensus 688 L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~ 761 (1153)
T PLN03210 688 MSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEK 761 (1153)
T ss_pred CCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhh
Confidence 99987666777766 7999999999999766566643 468999999999987 566554 57888888887643211
Q ss_pred C------CCcccccCCCCCcEEEccCCcCccCCC-CCCCCCCcCEEEccCCCCcccCCCCCccCCccEEEccCCCCCCcC
Q 004842 241 T------TIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTI 313 (728)
Q Consensus 241 ~------~~p~~~~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~ 313 (728)
. ..+..+...++|+.|++++|......| .+.++++|+.|++++|...+.+|.....++|+.|++++|.....+
T Consensus 762 l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L~~~ 841 (1153)
T PLN03210 762 LWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTF 841 (1153)
T ss_pred ccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCccccc
Confidence 0 112223345688899998887666666 688888999999988765557887654578889999887655555
Q ss_pred chhccCCccCceeecccccCcccCCcchhhhccCCCCCCcEEECcC-CcCCCcCCCC-CCCCceEEEcCCCc
Q 004842 314 PSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQN-NNLTNISGSF-NIPPNVTVRLRGNP 383 (728)
Q Consensus 314 p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~-N~l~~~~~~~-~~~~l~~l~l~~N~ 383 (728)
|.. .++|+.|+|++|.++ .+|.++. .+++|+.|++++ |+++.++... .++.+..++++++.
T Consensus 842 p~~---~~nL~~L~Ls~n~i~-~iP~si~-----~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 842 PDI---STNISDLNLSRTGIE-EVPWWIE-----KFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ccc---ccccCEeECCCCCCc-cChHHHh-----cCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 543 367888899999888 6888776 778888999987 7788776544 46777777777653
No 18
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.78 E-value=3.5e-21 Score=194.15 Aligned_cols=265 Identities=23% Similarity=0.270 Sum_probs=160.1
Q ss_pred CCCcceeEEECCCCCCccccCccccCCCCCCEEEccC-CCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCC
Q 004842 79 DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMW-NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLD 157 (728)
Q Consensus 79 ~~~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 157 (728)
..+.+|+.|||++|+|+.+-|++|..+.+|..|-+.+ |+|+......|++|..|+.|.+.-|++.....+.|..+++|.
T Consensus 88 ~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~ 167 (498)
T KOG4237|consen 88 KTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLS 167 (498)
T ss_pred cchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcc
Confidence 4577899999999999999999999999988876665 999966667899999999999999999999999999999999
Q ss_pred EEEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEccccc
Q 004842 158 RIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNN 237 (728)
Q Consensus 158 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 237 (728)
.|.+.+|.+..+-..+|..+..++.+.+..|.+. ..++++.+.... . ..|-+++.........+.+++
T Consensus 168 lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i-----cdCnL~wla~~~-a------~~~ietsgarc~~p~rl~~~R 235 (498)
T KOG4237|consen 168 LLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI-----CDCNLPWLADDL-A------MNPIETSGARCVSPYRLYYKR 235 (498)
T ss_pred hhcccchhhhhhccccccchhccchHhhhcCccc-----cccccchhhhHH-h------hchhhcccceecchHHHHHHH
Confidence 9999999998666669999999999999999743 122333322211 1 112223333333333344444
Q ss_pred CCCCCCccccc-CCCCCcEEEccCCcCccCCC--CCCCCCCcCEEEccCCCCcccCCCCCcc--CCccEEEccCCCCCCc
Q 004842 238 FEGTTIPASYS-NMSKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGT 312 (728)
Q Consensus 238 l~~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~--~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~N~l~~~ 312 (728)
+.. .-+..|. ....+..=-.+.+...+..| .|..+++|+.|+|++|+++ .|.+.+|. ..++.|.|..|+|...
T Consensus 236 i~q-~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~-~i~~~aFe~~a~l~eL~L~~N~l~~v 313 (498)
T KOG4237|consen 236 INQ-EDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKIT-RIEDGAFEGAAELQELYLTRNKLEFV 313 (498)
T ss_pred hcc-cchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccc-hhhhhhhcchhhhhhhhcCcchHHHH
Confidence 332 1111111 01111111111222222233 3445555555555555555 23332232 4455555555555544
Q ss_pred CchhccCCccCceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcC
Q 004842 313 IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNL 362 (728)
Q Consensus 313 ~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l 362 (728)
-...|.++..|+.|+|.+|+|+..-|-.|- .+..|..|+|-.|.+
T Consensus 314 ~~~~f~~ls~L~tL~L~~N~it~~~~~aF~-----~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 314 SSGMFQGLSGLKTLSLYDNQITTVAPGAFQ-----TLFSLSTLNLLSNPF 358 (498)
T ss_pred HHHhhhccccceeeeecCCeeEEEeccccc-----ccceeeeeehccCcc
Confidence 444555555555555555555544444443 344444555544444
No 19
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.76 E-value=4.9e-20 Score=203.67 Aligned_cols=277 Identities=25% Similarity=0.315 Sum_probs=231.9
Q ss_pred ceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEee
Q 004842 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (728)
Q Consensus 83 ~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 162 (728)
+|+.||+++|.++ ..|..+..+++|+.|+++.|.|. ..|.+..++++|++|.|.+|.+. ..|..+..+++|+.|+++
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 5899999988876 57888999999999999999998 77888999999999999999888 889999999999999999
Q ss_pred ccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCC
Q 004842 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (728)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 242 (728)
+|++. .+|..+..++.++.+.+++|..... ++... ++++++..|.+.+.++.++..+.. .|+|.+|.+.
T Consensus 123 ~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~--- 191 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIEVLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME--- 191 (1081)
T ss_pred hhccC-CCchhHHhhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---
Confidence 99987 6788888899999999999933322 22222 888999999999888888888777 7999999985
Q ss_pred CcccccCCCCCcEEEccCCcCccCCCCCCCCCCcCEEEccCCCCcccCCCCCccCCccEEEccCCCCCCcCchhccCCcc
Q 004842 243 IPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPR 322 (728)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 322 (728)
-..+.++.+|+.|....|++....- ..++|+.|+.++|.++ .+-......+|+++++++|++++. |++++.+.+
T Consensus 192 -~~dls~~~~l~~l~c~rn~ls~l~~---~g~~l~~L~a~~n~l~-~~~~~p~p~nl~~~dis~n~l~~l-p~wi~~~~n 265 (1081)
T KOG0618|consen 192 -VLDLSNLANLEVLHCERNQLSELEI---SGPSLTALYADHNPLT-TLDVHPVPLNLQYLDISHNNLSNL-PEWIGACAN 265 (1081)
T ss_pred -hhhhhhccchhhhhhhhcccceEEe---cCcchheeeeccCcce-eeccccccccceeeecchhhhhcc-hHHHHhccc
Confidence 3457778899999999998874332 3478999999999998 444344557999999999999954 599999999
Q ss_pred CceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCCcCCCCC-CCCceEEEcCCCcCC
Q 004842 323 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFN-IPPNVTVRLRGNPFC 385 (728)
Q Consensus 323 L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~~~~~-~~~l~~l~l~~N~~~ 385 (728)
|+.++..+|+|+ .+|..+. ...+|+.|+..+|.++.+++... ...+++|+|..|.+.
T Consensus 266 le~l~~n~N~l~-~lp~ri~-----~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~ 323 (1081)
T KOG0618|consen 266 LEALNANHNRLV-ALPLRIS-----RITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLP 323 (1081)
T ss_pred ceEecccchhHH-hhHHHHh-----hhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhcccc
Confidence 999999999996 8888877 67888999999999999987664 788899999999874
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=6.5e-20 Score=195.06 Aligned_cols=249 Identities=22% Similarity=0.271 Sum_probs=145.9
Q ss_pred EEECCCCCCc-cccCccccCCCCCCEEEccCCCCccC----CCccccCCCCCcEEeccCCcCCC------cCCccCCCCC
Q 004842 86 ELQLLNLNLS-GNLSPEIGRLSYLTILDFMWNKISGS----IPKEIGNIKSLELLLLNGNELTG------SLPEELGYLP 154 (728)
Q Consensus 86 ~L~l~~~~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~ 154 (728)
.|+|..++++ ......+..++.|+.|+++++.++.. ++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3566666665 34445556677788888888887432 44455667778888888777662 2334566677
Q ss_pred CCCEEEeeccCCCCCCcHhhhccCC---CCEEEccCccccc----ccccccCCC-CCCcEEECcCCCCCCC----CCcCC
Q 004842 155 KLDRIQIDQNYISGSLPKSFANLNK---TRHFHMNNNSISG----QIPPELSRL-PSLVHMLLDNNNLTGY----LPPEL 222 (728)
Q Consensus 155 ~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~~~~l 222 (728)
+|+.|++++|.+.+..+..+..+.+ |++|++++|.+.+ .+...+..+ ++|+.|++++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 8888888888777666666665555 7888888777762 223344555 6777777777777632 22334
Q ss_pred CCCCCCcEEEcccccCCCCC---CcccccCCCCCcEEEccCCcCccCCC-----CCCCCCCcCEEEccCCCCcccCCCCC
Q 004842 223 SELPKLLILQLDNNNFEGTT---IPASYSNMSKLLKLSLRNCSLQGPMP-----DLSRIPNLGYLDLSSNQLNGSIPPGR 294 (728)
Q Consensus 223 ~~l~~L~~L~L~~N~l~~~~---~p~~~~~l~~L~~L~L~~n~l~~~~~-----~l~~l~~L~~L~Ls~N~l~~~ip~~~ 294 (728)
..+++|++|++++|.+++.. ++..+..+++|+.|++++|.+++... .+..+++|+.|++++|.+++......
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 45566777777777766411 12234445567777777776653221 24455666666666666653111100
Q ss_pred ------ccCCccEEEccCCCCCC----cCchhccCCccCceeecccccCc
Q 004842 295 ------LSLNITTIKLSNNKLTG----TIPSNFSGLPRLQRLFIANNSLS 334 (728)
Q Consensus 295 ------~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~ 334 (728)
....|+.|++++|.++. .+...+..+++|+.+++++|+++
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 01355555555555541 12233344455555555555555
No 21
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=3.2e-19 Score=189.72 Aligned_cols=270 Identities=21% Similarity=0.263 Sum_probs=192.4
Q ss_pred EEEccCCCCc-cCCCccccCCCCCcEEeccCCcCCCc----CCccCCCCCCCCEEEeeccCCCC------CCcHhhhccC
Q 004842 110 ILDFMWNKIS-GSIPKEIGNIKSLELLLLNGNELTGS----LPEELGYLPKLDRIQIDQNYISG------SLPKSFANLN 178 (728)
Q Consensus 110 ~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~ 178 (728)
.|+|..+.++ ...+..|..+.+|+.|+++++.++.. ++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 5788888887 34455567788899999999998643 55567778889999999998873 2345677888
Q ss_pred CCCEEEccCcccccccccccCCCCC---CcEEECcCCCCCC----CCCcCCCCC-CCCcEEEcccccCCCC---CCcccc
Q 004842 179 KTRHFHMNNNSISGQIPPELSRLPS---LVHMLLDNNNLTG----YLPPELSEL-PKLLILQLDNNNFEGT---TIPASY 247 (728)
Q Consensus 179 ~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~~~~l~~l-~~L~~L~L~~N~l~~~---~~p~~~ 247 (728)
+|++|++++|.+.+..+..+..+.. |++|++++|++++ .+...+..+ ++|+.|++++|.+++. .++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 9999999999997666665555554 9999999999873 233345566 8999999999999741 133456
Q ss_pred cCCCCCcEEEccCCcCccCC-----CCCCCCCCcCEEEccCCCCcccCCCC----C-ccCCccEEEccCCCCCCcCchhc
Q 004842 248 SNMSKLLKLSLRNCSLQGPM-----PDLSRIPNLGYLDLSSNQLNGSIPPG----R-LSLNITTIKLSNNKLTGTIPSNF 317 (728)
Q Consensus 248 ~~l~~L~~L~L~~n~l~~~~-----~~l~~l~~L~~L~Ls~N~l~~~ip~~----~-~~~~L~~L~Ls~N~l~~~~p~~~ 317 (728)
..+++|++|++++|.+++.. ..+...++|+.|++++|.+++..... . ..++|+.|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 77788999999999988521 13455679999999999886332111 1 11679999999999886333333
Q ss_pred c-----CCccCceeecccccCccc----CCcchhhhccCCCCCCcEEECcCCcCCCcCC-----CC-CC-CCceEEEcCC
Q 004842 318 S-----GLPRLQRLFIANNSLSGS----IPSSIWQSRTLNATETFILDFQNNNLTNISG-----SF-NI-PPNVTVRLRG 381 (728)
Q Consensus 318 ~-----~l~~L~~L~L~~N~l~~~----ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~~-----~~-~~-~~l~~l~l~~ 381 (728)
. ..+.|+.|++++|.++.. +...+. ..++|+.+|+++|.++.... .+ .. +.+..+++.+
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~-----~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLA-----EKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKD 316 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHh-----cCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCC
Confidence 2 237899999999988732 222232 45788899999999986421 11 12 5677788887
Q ss_pred CcC
Q 004842 382 NPF 384 (728)
Q Consensus 382 N~~ 384 (728)
|+|
T Consensus 317 ~~~ 319 (319)
T cd00116 317 DSF 319 (319)
T ss_pred CCC
Confidence 765
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.71 E-value=1.5e-19 Score=162.53 Aligned_cols=163 Identities=26% Similarity=0.529 Sum_probs=119.1
Q ss_pred cCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCE
Q 004842 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (728)
Q Consensus 103 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 182 (728)
-++++++.|.||+|+++ .+|..+..+.+|+.|++++|+++ .+|..+..+++|+.|+++-|++. +.|..|+.++.|+.
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhh
Confidence 35556666777777777 55666777777777777777776 66667777777777777777765 56777777777777
Q ss_pred EEccCcccc-cccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEccCC
Q 004842 183 FHMNNNSIS-GQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (728)
Q Consensus 183 L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n 261 (728)
|+|++|.+. ..+|..|..++.|+-|+|+.|.+. .+|..++++++|+.|.+..|.+- .+|..++.++.|++|.+++|
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll--~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL--SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh--hCcHHHHHHHHHHHHhcccc
Confidence 777777664 346777777778888888888776 67777888888888888888875 67888888888888888888
Q ss_pred cCccCCCCCC
Q 004842 262 SLQGPMPDLS 271 (728)
Q Consensus 262 ~l~~~~~~l~ 271 (728)
+++-.+|.+.
T Consensus 184 rl~vlppel~ 193 (264)
T KOG0617|consen 184 RLTVLPPELA 193 (264)
T ss_pred eeeecChhhh
Confidence 8776666544
No 23
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.68 E-value=5.3e-19 Score=159.00 Aligned_cols=163 Identities=27% Similarity=0.530 Sum_probs=150.7
Q ss_pred CcceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEE
Q 004842 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (728)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (728)
+.+++.|.|++|.++ .+|+.+.++.+|+.|++++|++. .+|..++.+++|+.|++.-|++. ..|..|+.+|.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 467899999999998 67889999999999999999999 78999999999999999999998 8999999999999999
Q ss_pred eeccCCCC-CCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCC
Q 004842 161 IDQNYISG-SLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (728)
Q Consensus 161 L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 239 (728)
|.+|++.. .+|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+..|.+- .+|.+++.++.|++|.+.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 99999964 57999999999999999999998 77889999999999999999988 68999999999999999999998
Q ss_pred CCCCcccccCC
Q 004842 240 GTTIPASYSNM 250 (728)
Q Consensus 240 ~~~~p~~~~~l 250 (728)
.+|..++++
T Consensus 187 --vlppel~~l 195 (264)
T KOG0617|consen 187 --VLPPELANL 195 (264)
T ss_pred --ecChhhhhh
Confidence 577766654
No 24
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.67 E-value=8.9e-17 Score=174.82 Aligned_cols=107 Identities=26% Similarity=0.429 Sum_probs=88.1
Q ss_pred ccchHHHHhhcC---------CcccCCceeccCceEEEEEEeCC----CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCC
Q 004842 613 SFTYGEMALATN---------NFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH 678 (728)
Q Consensus 613 ~~~~~~~~~~~~---------~~~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~ 678 (728)
.+||+|--.+.. ....+++||.|.||.||+|.++- ...||||.++.+.. ..+++|..|+.+|+++.
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 456666443333 34566899999999999999743 35799999998654 34569999999999999
Q ss_pred CCcccceeEEEEeCCeEEEEEecCCCCCHHHHHhcCCCccc
Q 004842 679 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSGIFSVIR 719 (728)
Q Consensus 679 H~niv~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~ 719 (728)
||||++|.|+.......+||+|||+||+|+.||+.+.+..+
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqft 729 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFT 729 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceE
Confidence 99999999999999999999999999999999997654433
No 25
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.62 E-value=8.4e-16 Score=156.85 Aligned_cols=96 Identities=29% Similarity=0.446 Sum_probs=83.1
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
.+|...+.||+|+||+||+|.++ ++..||||.+... .....+-...|+++++.++|||||++++++..++..|||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 45666777999999999999964 4889999999765 33445568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCCCccc
Q 004842 701 FMSNGTLRDQLSGIFSVIR 719 (728)
Q Consensus 701 y~~~GsL~~~L~~~~~~~~ 719 (728)
||.+|||.+||+.++...+
T Consensus 90 yC~gGDLs~yi~~~~~l~e 108 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGRLPE 108 (429)
T ss_pred eCCCCCHHHHHHHcCCCCH
Confidence 9999999999998765443
No 26
>PLN03150 hypothetical protein; Provisional
Probab=99.60 E-value=4.9e-15 Score=169.95 Aligned_cols=158 Identities=35% Similarity=0.553 Sum_probs=125.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC---CCcceEEcCCCCCCCCCcceeEEECCCCCCccccCccccCC
Q 004842 29 DSITDPIEVSALRSIKKSLVDDYSKLSNWNRGDPCT---SNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRL 105 (728)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~w~~~~~C~---~~w~gv~C~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~l 105 (728)
...+.+.|++||+.+|+.+.++. ..+|+ ++||. +.|.||.|..... .....++.|+|+++++.|.+|..++.+
T Consensus 366 ~~~t~~~~~~aL~~~k~~~~~~~--~~~W~-g~~C~p~~~~w~Gv~C~~~~~-~~~~~v~~L~L~~n~L~g~ip~~i~~L 441 (623)
T PLN03150 366 ESKTLLEEVSALQTLKSSLGLPL--RFGWN-GDPCVPQQHPWSGADCQFDST-KGKWFIDGLGLDNQGLRGFIPNDISKL 441 (623)
T ss_pred ccccCchHHHHHHHHHHhcCCcc--cCCCC-CCCCCCcccccccceeeccCC-CCceEEEEEECCCCCccccCCHHHhCC
Confidence 33456788999999999987543 24796 46774 2699999952110 112358899999999999999999999
Q ss_pred CCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhcc-CCCCEEE
Q 004842 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANL-NKTRHFH 184 (728)
Q Consensus 106 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~ 184 (728)
++|+.|+|++|.+.|.+|..++.+++|+.|+|++|++++.+|+.++++++|++|+|++|.+++.+|..+..+ .++..++
T Consensus 442 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~ 521 (623)
T PLN03150 442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFN 521 (623)
T ss_pred CCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEE
Confidence 999999999999999999889999999999999999998899888999999999999999888888887653 3566677
Q ss_pred ccCccc
Q 004842 185 MNNNSI 190 (728)
Q Consensus 185 L~~N~l 190 (728)
+.+|..
T Consensus 522 ~~~N~~ 527 (623)
T PLN03150 522 FTDNAG 527 (623)
T ss_pred ecCCcc
Confidence 776653
No 27
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.59 E-value=1.1e-15 Score=169.67 Aligned_cols=96 Identities=28% Similarity=0.541 Sum_probs=83.8
Q ss_pred HhhcCCcccCCceeccCceEEEEEEeC------CCCEEEEEEcccCChh-cHHHHHHHHHHHhcCCCCcccceeEEEEeC
Q 004842 620 ALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (728)
Q Consensus 620 ~~~~~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 692 (728)
...+.+....+.||+|+||+||+|+.. +.+.||||.++..... .+++|.+|+++++.++|||||+|+|+|..+
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~ 561 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG 561 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC
Confidence 345566777789999999999999853 3467999999876554 677999999999999999999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhcCC
Q 004842 693 GEQMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
++.++|+|||.+|||.+||+.+.
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~s 584 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARS 584 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhC
Confidence 99999999999999999998653
No 28
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.55 E-value=1.3e-14 Score=153.31 Aligned_cols=93 Identities=32% Similarity=0.531 Sum_probs=83.3
Q ss_pred hcCCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhc-HHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~-~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
++......++||+|.||+|..|+...+..||||+++...... .++|.+|+++|.+++|||||+|+|+|..+++..+|+|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 344455678899999999999999878999999998765544 4799999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
||++|+|.+||.+.
T Consensus 616 YmEnGDLnqFl~ah 629 (807)
T KOG1094|consen 616 YMENGDLNQFLSAH 629 (807)
T ss_pred HHhcCcHHHHHHhc
Confidence 99999999999875
No 29
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.54 E-value=4.4e-15 Score=157.29 Aligned_cols=89 Identities=35% Similarity=0.618 Sum_probs=79.8
Q ss_pred CCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
+.+...+.||+|.||.||.|.++....||||.++.... ..++|.+|+.+|++++|+|||+++|+|..++..+||||||+
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 33445678999999999999997777999999987643 34689999999999999999999999999889999999999
Q ss_pred CCCHHHHHhc
Q 004842 704 NGTLRDQLSG 713 (728)
Q Consensus 704 ~GsL~~~L~~ 713 (728)
+|+|.+||+.
T Consensus 285 ~GsLl~yLr~ 294 (468)
T KOG0197|consen 285 KGSLLDYLRT 294 (468)
T ss_pred cCcHHHHhhh
Confidence 9999999996
No 30
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.54 E-value=8.7e-15 Score=157.46 Aligned_cols=100 Identities=32% Similarity=0.509 Sum_probs=83.5
Q ss_pred HHHHhhcCCcccCCceeccCceEEEEEEeCC--C--CE-EEEEEcccC---ChhcHHHHHHHHHHHhcCCCCcccceeEE
Q 004842 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPD--G--TV-VAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688 (728)
Q Consensus 617 ~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~--g--~~-vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~ 688 (728)
+.++...++....++||+|+||.||+|.+.. + .. ||||..+.. .....++|++|+++|++++|||||+++|+
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 3344445566667999999999999999643 2 23 899999852 24456789999999999999999999999
Q ss_pred EEeCCeEEEEEecCCCCCHHHHHhcCCC
Q 004842 689 CDEEGEQMLVYEFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 689 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~ 716 (728)
+..+.+.|+|||+|+||+|.+||+....
T Consensus 230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~~ 257 (474)
T KOG0194|consen 230 AVLEEPLMLVMELCNGGSLDDYLKKNKK 257 (474)
T ss_pred EcCCCccEEEEEecCCCcHHHHHHhCCC
Confidence 9999999999999999999999998764
No 31
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.53 E-value=1.5e-14 Score=153.49 Aligned_cols=85 Identities=35% Similarity=0.571 Sum_probs=74.2
Q ss_pred CCceeccCceEEEEEEeCCCCEEEEEEcccCChhc--HHHHHHHHHHHhcCCCCcccceeEEEEeCC-eEEEEEecCCCC
Q 004842 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLVYEFMSNG 705 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~Ey~~~G 705 (728)
.+.+|+|+||+||+|.+.+...||||++....... .++|.+|+.+|.+++|||||+++|+|.+.. ...+|||||++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 45599999999999999644449999997643322 458999999999999999999999998877 799999999999
Q ss_pred CHHHHHhc
Q 004842 706 TLRDQLSG 713 (728)
Q Consensus 706 sL~~~L~~ 713 (728)
+|.++|+.
T Consensus 126 sL~~~l~~ 133 (362)
T KOG0192|consen 126 SLSVLLHK 133 (362)
T ss_pred cHHHHHhh
Confidence 99999998
No 32
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.53 E-value=3.2e-14 Score=146.50 Aligned_cols=88 Identities=25% Similarity=0.459 Sum_probs=74.6
Q ss_pred cCCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhc--CCCCcccceeEEEEeC----CeEE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEE----GEQM 696 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~----~~~~ 696 (728)
..+....+.||+|+||+||+|.| .|+.||||.+... +++.|.+|.++... +||+||..+++.-..+ .++|
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred hheeEEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 34567778999999999999999 4889999999764 35678899999876 4999999999986543 3689
Q ss_pred EEEecCCCCCHHHHHhcC
Q 004842 697 LVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~ 714 (728)
||+||.|+|||+|||...
T Consensus 286 LvTdYHe~GSL~DyL~r~ 303 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNRN 303 (513)
T ss_pred EeeecccCCcHHHHHhhc
Confidence 999999999999999874
No 33
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.47 E-value=2.2e-13 Score=141.37 Aligned_cols=99 Identities=28% Similarity=0.397 Sum_probs=79.2
Q ss_pred CcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHh--cCCCCcccceeEEEEeCC----eEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLS--RLHHRNLVSLVGYCDEEG----EQMLV 698 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~--~l~H~niv~l~g~~~~~~----~~~lV 698 (728)
..+...+||+|+||.||||++. ++.||||++... ..+.|.+|-++.+ .++|+||++++|+-...+ +.|||
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred chhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 3445578999999999999994 699999999754 3456888877766 569999999999987665 88999
Q ss_pred EecCCCCCHHHHHhcCCCccc---------cccccccc
Q 004842 699 YEFMSNGTLRDQLSGIFSVIR---------HSGICFFL 727 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~~~~~---------~~~~~~~~ 727 (728)
+||.++|+|.+||......+. .++++|+|
T Consensus 287 t~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LH 324 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLH 324 (534)
T ss_pred eeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhc
Confidence 999999999999998643322 55666665
No 34
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.47 E-value=2.3e-14 Score=151.94 Aligned_cols=99 Identities=31% Similarity=0.555 Sum_probs=88.9
Q ss_pred hHHHHhhcCCcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCe
Q 004842 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (728)
Q Consensus 616 ~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 694 (728)
+++++..+.++...+++|-|.||.||.|.|+. ...||||.++.... ..++|..|+.+|+.++|||+|+|+|+|..+..
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 36677777888889999999999999999875 56899999987654 35799999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcCC
Q 004842 695 QMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
+|||+|||.+|+|.|||++..
T Consensus 338 FYIiTEfM~yGNLLdYLRecn 358 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECN 358 (1157)
T ss_pred eEEEEecccCccHHHHHHHhc
Confidence 999999999999999999754
No 35
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=9.3e-14 Score=141.87 Aligned_cols=93 Identities=23% Similarity=0.388 Sum_probs=78.4
Q ss_pred CcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChh-------cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQ-------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~-------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (728)
.|...+.+|+|+||.|-.|. -++|+.||||.++..... ......+|+++|++++|||||++++++...+..|
T Consensus 173 ~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~Y 252 (475)
T KOG0615|consen 173 YYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSY 252 (475)
T ss_pred eeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceE
Confidence 35566889999999999998 456999999999753211 1234579999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhcCCCc
Q 004842 697 LVYEFMSNGTLRDQLSGIFSV 717 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~~~ 717 (728)
||||||++|+|++++-+.+..
T Consensus 253 mVlE~v~GGeLfd~vv~nk~l 273 (475)
T KOG0615|consen 253 MVLEYVEGGELFDKVVANKYL 273 (475)
T ss_pred EEEEEecCccHHHHHHhcccc
Confidence 999999999999999876543
No 36
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.45 E-value=6.2e-14 Score=153.49 Aligned_cols=92 Identities=35% Similarity=0.500 Sum_probs=77.0
Q ss_pred cccCCceeccCceEEEEEEe-CCC----CEEEEEEcccC-ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDG----TVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
+...++||+|+||+||||.| +.| .+||+|++... ..+...+|.+|+-+|++++|||+++|+|+|.... ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 44568999999999999985 444 47999998764 3344578999999999999999999999997654 88999
Q ss_pred ecCCCCCHHHHHhcCCCcc
Q 004842 700 EFMSNGTLRDQLSGIFSVI 718 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~~~ 718 (728)
+|||.|.|.||++.++..+
T Consensus 777 q~mP~G~LlDyvr~hr~~i 795 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHRDNI 795 (1177)
T ss_pred HhcccchHHHHHHHhhccc
Confidence 9999999999999765433
No 37
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=8.8e-13 Score=141.49 Aligned_cols=104 Identities=24% Similarity=0.460 Sum_probs=88.9
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
..|...+.||+|+|+.||+++- ..|..||+|++.+... ...+...+||++.++++|||||++++++.+.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4577889999999999999995 7799999999976422 23457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcCCCcccccccccccC
Q 004842 700 EFMSNGTLRDQLSGIFSVIRHSGICFFLH 728 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~ 728 (728)
|+|++|+|.+++.. +...+|..++|++|
T Consensus 98 ELC~~~sL~el~Kr-rk~ltEpEary~l~ 125 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR-RKPLTEPEARYFLR 125 (592)
T ss_pred EecCCccHHHHHHh-cCCCCcHHHHHHHH
Confidence 99999999999984 45667666666643
No 38
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37 E-value=5.8e-13 Score=139.41 Aligned_cols=96 Identities=31% Similarity=0.489 Sum_probs=79.0
Q ss_pred CcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeC--CeEEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVY 699 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~ 699 (728)
.|....+||+|.||.||||. ..+|+.||+|+++-... ....-..+||.+|+++.|||||+|.|...+. ..+|||+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 35566789999999999998 66799999999976542 2334568999999999999999999999876 6899999
Q ss_pred ecCCCCCHHHHHhcCCCccccc
Q 004842 700 EFMSNGTLRDQLSGIFSVIRHS 721 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~~~~~~ 721 (728)
|||++ ||..++......+++.
T Consensus 198 eYMdh-DL~GLl~~p~vkft~~ 218 (560)
T KOG0600|consen 198 EYMDH-DLSGLLSSPGVKFTEP 218 (560)
T ss_pred ecccc-hhhhhhcCCCcccChH
Confidence 99998 9999998754444433
No 39
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.35 E-value=3.2e-14 Score=150.39 Aligned_cols=197 Identities=28% Similarity=0.466 Sum_probs=115.6
Q ss_pred CCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEE
Q 004842 129 IKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHML 208 (728)
Q Consensus 129 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 208 (728)
+..-...||+.|++. .+|+.+..+..|+.+.|+.|.|. .+|..++++..|++|+|+.|++. ..|..++.|+ |+.|.
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 444456677777776 66666666666666666666665 45666666666666666666655 3344444332 45555
Q ss_pred CcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEccCCcCccCCCCCCCCCCcCEEEccCCCCcc
Q 004842 209 LDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNG 288 (728)
Q Consensus 209 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~ 288 (728)
+++|+++ .+|+.++.+..|..||.+.|++. .+|..+ +++.+|+.|.++.|++.
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~--slpsql-----------------------~~l~slr~l~vrRn~l~- 202 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ--SLPSQL-----------------------GYLTSLRDLNVRRNHLE- 202 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh--hchHHh-----------------------hhHHHHHHHHHhhhhhh-
Confidence 5555555 44445555555555555555553 344444 44455555555555554
Q ss_pred cCCCCCccCCccEEEccCCCCCCcCchhccCCccCceeecccccCcccCCcchhhhccCCCCCCcEEECcCC
Q 004842 289 SIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNN 360 (728)
Q Consensus 289 ~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N 360 (728)
.+|+......|.+||+|.|+++ .+|-.|..|..|++|.|.+|.|+ .-|..++.... .--.++|+.+-.
T Consensus 203 ~lp~El~~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGk--VHIFKyL~~qA~ 270 (722)
T KOG0532|consen 203 DLPEELCSLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGK--VHIFKYLSTQAC 270 (722)
T ss_pred hCCHHHhCCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccc--eeeeeeecchhc
Confidence 4444444456677777777777 67778888888888888888887 56666653221 122345555555
No 40
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.35 E-value=1.1e-12 Score=151.38 Aligned_cols=92 Identities=35% Similarity=0.616 Sum_probs=80.4
Q ss_pred cCCcccCCceeccCceEEEEEEeCC--CC----EEEEEEcccC-ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILPD--GT----VVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~--g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 695 (728)
..+.+..+.||+|+||.||+|.+.+ |. .||||.+... +.+...+|.+|..+|++++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 4455667889999999999999754 33 4899999765 455567899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 004842 696 MLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~ 714 (728)
+|++|||++|||..||++.
T Consensus 771 ~i~leyM~gGDL~sflr~~ 789 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRES 789 (1025)
T ss_pred EEEehhcccCcHHHHHHhc
Confidence 9999999999999999975
No 41
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.32 E-value=3.2e-12 Score=129.84 Aligned_cols=87 Identities=26% Similarity=0.378 Sum_probs=76.1
Q ss_pred cCCceeccCceEEEEEEeC-CCCEEEEEEcccC-ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC-eEEEEEecCCC
Q 004842 628 SSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLVYEFMSN 704 (728)
Q Consensus 628 ~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~Ey~~~ 704 (728)
..+.||+|..|+|||+..+ +++.+|+|.+... ...-+++..+|++++.+.+||+||+++|.+.... +..|+||||++
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDg 162 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDG 162 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCC
Confidence 4578999999999999964 5889999999543 3334578999999999999999999999999888 59999999999
Q ss_pred CCHHHHHhcC
Q 004842 705 GTLRDQLSGI 714 (728)
Q Consensus 705 GsL~~~L~~~ 714 (728)
|+|++++...
T Consensus 163 GSLd~~~k~~ 172 (364)
T KOG0581|consen 163 GSLDDILKRV 172 (364)
T ss_pred CCHHHHHhhc
Confidence 9999999864
No 42
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.30 E-value=2.7e-12 Score=124.17 Aligned_cols=94 Identities=28% Similarity=0.518 Sum_probs=80.2
Q ss_pred CcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhc--HHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
.|...+++|+|.||.||+|. ...|+.||||+++.+...+ ...-.+|++.++.++|+||+.+++++-..+...||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 45667889999999999998 5569999999998653321 34678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCCCccc
Q 004842 702 MSNGTLRDQLSGIFSVIR 719 (728)
Q Consensus 702 ~~~GsL~~~L~~~~~~~~ 719 (728)
|+. ||...++++....+
T Consensus 83 m~t-dLe~vIkd~~i~l~ 99 (318)
T KOG0659|consen 83 MPT-DLEVVIKDKNIILS 99 (318)
T ss_pred ccc-cHHHHhcccccccC
Confidence 997 99999988765444
No 43
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.29 E-value=3.5e-12 Score=139.87 Aligned_cols=201 Identities=31% Similarity=0.461 Sum_probs=139.0
Q ss_pred EEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCC-CCCEEEeeccCCCCCCcHhhhccCCCCEEEccCc
Q 004842 110 ILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLP-KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (728)
Q Consensus 110 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (728)
.+++..|.+... +..+..++.++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 577777776422 233455577777888777777 5566666664 7888888888776 34466777788888888888
Q ss_pred ccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEccCCcCccCCC
Q 004842 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP 268 (728)
Q Consensus 189 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~ 268 (728)
++.. +|...+.++.|+.|++++|+++ .+|........|++|.+++|.+. ..+..+.++.++..+.+.+|++...+.
T Consensus 174 ~l~~-l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~--~~~~~~~~~~~l~~l~l~~n~~~~~~~ 249 (394)
T COG4886 174 DLSD-LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII--ELLSSLSNLKNLSGLELSNNKLEDLPE 249 (394)
T ss_pred hhhh-hhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce--ecchhhhhcccccccccCCceeeeccc
Confidence 7773 4444446777888888888877 45555555566888888888543 566677777788888888887776544
Q ss_pred CCCCCCCcCEEEccCCCCcccCCCCCccCCccEEEccCCCCCCcCchhcc
Q 004842 269 DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFS 318 (728)
Q Consensus 269 ~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 318 (728)
.+..++++++|++++|+++ .++......+++.|++++|.+...+|....
T Consensus 250 ~~~~l~~l~~L~~s~n~i~-~i~~~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 250 SIGNLSNLETLDLSNNQIS-SISSLGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred hhccccccceecccccccc-ccccccccCccCEEeccCccccccchhhhc
Confidence 6677777888888888887 555422226788888888888766665544
No 44
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.29 E-value=7.7e-14 Score=147.55 Aligned_cols=174 Identities=32% Similarity=0.480 Sum_probs=104.4
Q ss_pred eeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeec
Q 004842 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ 163 (728)
Q Consensus 84 l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 163 (728)
.+..|++.|.+. .+|..++.+..|+.+.|.+|.+. .+|..+.++..|++|||+.|+++ .+|..++.|+ |+.|-+++
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sN 152 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSN 152 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEec
Confidence 444555655555 45555555666666666666666 55666666666666666666666 5555555554 66666666
Q ss_pred cCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCCC
Q 004842 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (728)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 243 (728)
|+++ .+|+.++.+..|..|+.+.|.+. .+|..++++.+|+.|.+..|++. .+|+++..|+ |..||+++|+++ .+
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis--~i 226 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS--YL 226 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee--ec
Confidence 6665 45555555566666666666655 34555666666666666666665 3444555443 666666666665 45
Q ss_pred cccccCCCCCcEEEccCCcCccCC
Q 004842 244 PASYSNMSKLLKLSLRNCSLQGPM 267 (728)
Q Consensus 244 p~~~~~l~~L~~L~L~~n~l~~~~ 267 (728)
|..|.+|+.|++|-|.+|.++..+
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred chhhhhhhhheeeeeccCCCCCCh
Confidence 666666666666666666665433
No 45
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28 E-value=1.8e-12 Score=123.66 Aligned_cols=92 Identities=27% Similarity=0.452 Sum_probs=80.8
Q ss_pred cCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
.++|+..+.+|+|.||.||.|..+ .+..||+|++.+... +.++++.+|+++-+.++||||.+++||+.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 456888999999999999999865 477899999976432 2356899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 004842 699 YEFMSNGTLRDQLSGI 714 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~ 714 (728)
+||.++|++++.|.+.
T Consensus 101 lEya~~gel~k~L~~~ 116 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEG 116 (281)
T ss_pred EEecCCchHHHHHHhc
Confidence 9999999999999943
No 46
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.24 E-value=8.8e-12 Score=136.71 Aligned_cols=201 Identities=32% Similarity=0.447 Sum_probs=157.5
Q ss_pred cEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccC-CCCEEEccCcccccccccccCCCCCCcEEECcC
Q 004842 133 ELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLN-KTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 211 (728)
Q Consensus 133 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 211 (728)
..+++..|.+. .....+..++.++.|++.+|.++. ++.....+. +|+.|++++|.+. .+|..+..+++|+.|++++
T Consensus 96 ~~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 96 PSLDLNLNRLR-SNISELLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred ceeeccccccc-cCchhhhcccceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 36888888875 233445666889999999999984 555566664 8999999999987 4456788899999999999
Q ss_pred CCCCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEccCCcCccCCCCCCCCCCcCEEEccCCCCcccCC
Q 004842 212 NNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIP 291 (728)
Q Consensus 212 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip 291 (728)
|+++ .+|...+.+++|+.|++++|+++ .+|........|++|.+++|++...+..+..+.++..+.+.+|++.. ++
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~--~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~-~~ 248 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS--DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLED-LP 248 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc--cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeee-cc
Confidence 9998 45665558899999999999997 67777777777999999999766566677888889999999998873 23
Q ss_pred CCCc-cCCccEEEccCCCCCCcCchhccCCccCceeecccccCcccCCcchh
Q 004842 292 PGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (728)
Q Consensus 292 ~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~ 342 (728)
.... ..+++.|++++|+++...+ +..+.+|+.|++++|.++...|....
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred chhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhhc
Confidence 2222 2569999999999995543 88899999999999999976665543
No 47
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.23 E-value=3.6e-12 Score=129.44 Aligned_cols=95 Identities=25% Similarity=0.458 Sum_probs=82.4
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHH---HHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKE---FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~---f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
.|...+.+|+|.||.|-++.- ..|+.||||.++.....++++ ..+|+++|+.++||||+.++.++...+...||||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 355567899999999999984 679999999998765554443 6799999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCCCccc
Q 004842 701 FMSNGTLRDQLSGIFSVIR 719 (728)
Q Consensus 701 y~~~GsL~~~L~~~~~~~~ 719 (728)
|..+|+|+||+.++....+
T Consensus 134 YaS~GeLYDYiSer~~LsE 152 (668)
T KOG0611|consen 134 YASGGELYDYISERGSLSE 152 (668)
T ss_pred ecCCccHHHHHHHhccccH
Confidence 9999999999998766555
No 48
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.22 E-value=1.9e-11 Score=129.41 Aligned_cols=101 Identities=18% Similarity=0.272 Sum_probs=86.1
Q ss_pred hhcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcH---HHHHHHHHHHhcCCCCcccceeEEEEeCCeEE
Q 004842 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (728)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~---~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (728)
...++|+...+||+|+||.||.|+-+ .|..+|+|+++++..... +-...|-.+|...+++.||+|+-.+.+.+.+|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 34578999999999999999999855 499999999987654432 34778999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhcCCCccccc
Q 004842 697 LVYEFMSNGTLRDQLSGIFSVIRHS 721 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~~~~~~~ 721 (728)
|||||+||||+...|.......+..
T Consensus 218 LiMEylPGGD~mTLL~~~~~L~e~~ 242 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKDTLTEDW 242 (550)
T ss_pred EEEEecCCccHHHHHHhcCcCchHH
Confidence 9999999999999998876554433
No 49
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.22 E-value=1.7e-11 Score=126.30 Aligned_cols=86 Identities=42% Similarity=0.664 Sum_probs=72.9
Q ss_pred CCceeccCceEEEEEEeC-----CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 629 STQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
.+.||.|.||.||+|.+. .+..|+||.++... ....++|.+|++.+++++||||++++|+|...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 468999999999999986 25689999996543 334678999999999999999999999999888899999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.++|+..
T Consensus 84 ~~g~L~~~L~~~ 95 (259)
T PF07714_consen 84 PGGSLDDYLKSK 95 (259)
T ss_dssp TTEBHHHHHHHT
T ss_pred cccccccccccc
Confidence 999999999986
No 50
>PHA02988 hypothetical protein; Provisional
Probab=99.21 E-value=4.8e-11 Score=124.61 Aligned_cols=100 Identities=19% Similarity=0.294 Sum_probs=80.6
Q ss_pred ccccchHHHHhhcCCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhc---HHHHHHHHHHHhcCCCCcccceeE
Q 004842 611 VRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVG 687 (728)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~niv~l~g 687 (728)
.+.++.+++. ......||+|++|.||+|.+ +|+.||||+++...... .+.|.+|+.++.+++|||||+++|
T Consensus 12 ~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 12 IKCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred ceecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 3445556652 23346899999999999998 68899999997643322 357889999999999999999999
Q ss_pred EEEe----CCeEEEEEecCCCCCHHHHHhcCCC
Q 004842 688 YCDE----EGEQMLVYEFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 688 ~~~~----~~~~~lV~Ey~~~GsL~~~L~~~~~ 716 (728)
++.+ ....++||||+++|+|.++++.+..
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~ 118 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKEKD 118 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhhCCC
Confidence 9976 3468999999999999999987543
No 51
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.21 E-value=3.5e-11 Score=124.37 Aligned_cols=92 Identities=28% Similarity=0.459 Sum_probs=79.1
Q ss_pred CCcccCCceeccCceEEEEEEeC----CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
++|+..+.||+|+||.||+|.++ .+..||+|.++.... ...+.|.+|+.++.+++|||||+++|++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 45777889999999999999853 356899999976532 3345799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcCC
Q 004842 699 YEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~ 715 (728)
|||+++|+|.+++....
T Consensus 85 ~e~~~~~~L~~~l~~~~ 101 (266)
T cd05064 85 TEYMSNGALDSFLRKHE 101 (266)
T ss_pred EEeCCCCcHHHHHHhCC
Confidence 99999999999998653
No 52
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.20 E-value=2e-11 Score=124.01 Aligned_cols=100 Identities=22% Similarity=0.340 Sum_probs=84.9
Q ss_pred cCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhc---HHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
.++|+..++||+|+||+||....+ .++.+|+|++++..... .+...+|..++.+++||.||+++-.+.+.+.+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 457888999999999999999854 48999999998754322 34578999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcCCCcccccc
Q 004842 699 YEFMSNGTLRDQLSGIFSVIRHSG 722 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~~~~~~~~ 722 (728)
+||+.||+|+.+|..++...+...
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~a 127 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRA 127 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHH
Confidence 999999999999998765554333
No 53
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.20 E-value=1e-11 Score=123.83 Aligned_cols=92 Identities=23% Similarity=0.356 Sum_probs=75.2
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhc--HHHHHHHHHHHhcCCCCcccceeEEEEe--CCeEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLV 698 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV 698 (728)
++|+..+.|++|.||.||+|+- ++++.||+|+++...... .-.-.+||.++.+++|||||.+..+... -+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 4566778999999999999984 458899999997653211 1235899999999999999999998854 4579999
Q ss_pred EecCCCCCHHHHHhcCCC
Q 004842 699 YEFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~~ 716 (728)
||||++ ||...|+..++
T Consensus 156 Me~~Eh-DLksl~d~m~q 172 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMKQ 172 (419)
T ss_pred HHHHHh-hHHHHHHhccC
Confidence 999998 99999987653
No 54
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.19 E-value=2.2e-11 Score=130.07 Aligned_cols=97 Identities=29% Similarity=0.523 Sum_probs=79.8
Q ss_pred hcCCcccCCceeccCceEEEEEEeCC---C--CEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeE
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILPD---G--TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~---g--~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 695 (728)
.++.....++||.|.||.||+|.+.+ | ..||||..+... ....+.|..|+-+|++++|||||+|+|+|.+ .+.
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~ 465 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPM 465 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cce
Confidence 34455667899999999999999633 3 358999998743 3445679999999999999999999999975 679
Q ss_pred EEEEecCCCCCHHHHHhcCCCccc
Q 004842 696 MLVYEFMSNGTLRDQLSGIFSVIR 719 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~~~~~~ 719 (728)
|||||.++.|.|..||..++....
T Consensus 466 WivmEL~~~GELr~yLq~nk~sL~ 489 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNKDSLP 489 (974)
T ss_pred eEEEecccchhHHHHHHhccccch
Confidence 999999999999999997765443
No 55
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.18 E-value=7.8e-11 Score=126.08 Aligned_cols=92 Identities=23% Similarity=0.327 Sum_probs=80.1
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
++|+..+.||+|+||.||++... ++..+|+|.+..... ...++|.+|++++++++|+|||+++++|...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 56888899999999999999865 578899998875422 2345799999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCC
Q 004842 702 MSNGTLRDQLSGIF 715 (728)
Q Consensus 702 ~~~GsL~~~L~~~~ 715 (728)
+++|+|.+++....
T Consensus 85 ~~~~~L~~~l~~~~ 98 (333)
T cd06650 85 MDGGSLDQVLKKAG 98 (333)
T ss_pred CCCCcHHHHHHHcC
Confidence 99999999997643
No 56
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.18 E-value=1.5e-11 Score=131.59 Aligned_cols=108 Identities=20% Similarity=0.347 Sum_probs=86.4
Q ss_pred HHHHhhcCCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChh--cHHHHHHHHHHHhcCCCCcccceeEEEEeCCe
Q 004842 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (728)
Q Consensus 617 ~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 694 (728)
+++....+.+.....||+|+||+||+|.|. ..||||.+...... ..+.|.+|+.++++-||.||+=+.|||..++.
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 334444444556688999999999999984 35999999765433 34689999999999999999999999987766
Q ss_pred EEEEEecCCCCCHHHHHhcCCCccc-----------cccccccc
Q 004842 695 QMLVYEFMSNGTLRDQLSGIFSVIR-----------HSGICFFL 727 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~~~~~~-----------~~~~~~~~ 727 (728)
+||+.+|++-+|+.+||-.....+ .++|-|+|
T Consensus 463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH 505 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH 505 (678)
T ss_pred -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh
Confidence 999999999999999997554333 66777766
No 57
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.17 E-value=1.2e-11 Score=130.88 Aligned_cols=94 Identities=24% Similarity=0.355 Sum_probs=79.9
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChh--cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|..-+.||+|.||.||||.-+ +.+.||+|.+.+.... +.+...+|++++++++|||||.++.+|......|+|+||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 4556678999999999999854 4789999999764332 345689999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCCCccc
Q 004842 702 MSNGTLRDQLSGIFSVIR 719 (728)
Q Consensus 702 ~~~GsL~~~L~~~~~~~~ 719 (728)
+.+ +|+.+|.......+
T Consensus 83 a~g-~L~~il~~d~~lpE 99 (808)
T KOG0597|consen 83 AVG-DLFTILEQDGKLPE 99 (808)
T ss_pred hhh-hHHHHHHhccCCCH
Confidence 987 99999997765544
No 58
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.17 E-value=4.9e-11 Score=123.93 Aligned_cols=84 Identities=25% Similarity=0.373 Sum_probs=71.7
Q ss_pred ceeccCceEEEEEEeCC-------------------------CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccce
Q 004842 631 QIGQGGYGKVYKGILPD-------------------------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685 (728)
Q Consensus 631 ~iG~G~fg~Vy~~~~~~-------------------------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l 685 (728)
.||+|+||.||+|.+.. ...||+|.+........++|.+|+.+++.++|||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997421 13589999976544445679999999999999999999
Q ss_pred eEEEEeCCeEEEEEecCCCCCHHHHHhcC
Q 004842 686 VGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 686 ~g~~~~~~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
+|+|...+..++||||+++|+|.++++..
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~ 110 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE 110 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc
Confidence 99999999999999999999999999754
No 59
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.17 E-value=7.9e-11 Score=121.78 Aligned_cols=96 Identities=25% Similarity=0.323 Sum_probs=84.6
Q ss_pred HHhhcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 619 MALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 619 ~~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
++.++.++.....||+|+||.||+|... ++..||+|.+........+.+.+|++++++++|+||++++|++..++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 4556777777889999999999999854 578899999877655556789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 004842 698 VYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~ 714 (728)
|+||+++|+|.++++..
T Consensus 83 v~e~~~~~~L~~~l~~~ 99 (268)
T cd06624 83 FMEQVPGGSLSALLRSK 99 (268)
T ss_pred EEecCCCCCHHHHHHHh
Confidence 99999999999999864
No 60
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=2.3e-12 Score=125.46 Aligned_cols=88 Identities=32% Similarity=0.547 Sum_probs=74.3
Q ss_pred CcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEE-EEeCCe-EEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGY-CDEEGE-QMLVY 699 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~-~~~~~~-~~lV~ 699 (728)
+|...++||+|.||+|||+. +.+|..||.|.++-+. ....++...|+.++++++|||||+++++ +.++.+ .+|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 45667899999999999998 6789999999997432 3345679999999999999999999994 444445 89999
Q ss_pred ecCCCCCHHHHHh
Q 004842 700 EFMSNGTLRDQLS 712 (728)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (728)
|||+.|||.+.++
T Consensus 100 E~c~~GDLsqmIk 112 (375)
T KOG0591|consen 100 ELCDAGDLSQMIK 112 (375)
T ss_pred HhhcccCHHHHHH
Confidence 9999999999986
No 61
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.17 E-value=5.9e-11 Score=129.85 Aligned_cols=94 Identities=24% Similarity=0.439 Sum_probs=79.3
Q ss_pred hhcCCcccCCceeccCceEEEEEEeCC------CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCC-CCcccceeEEEEeC
Q 004842 621 LATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE 692 (728)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~ 692 (728)
.....|...+.||+|+||.||+|+... +..||||+++.... ...+.|.+|++++++++ |||||+++|+|...
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 345678888999999999999998421 34699999975433 23457999999999996 99999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhcC
Q 004842 693 GEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
+..++|||||++|+|.++|+..
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~ 135 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKN 135 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHh
Confidence 9999999999999999999864
No 62
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.17 E-value=9.6e-11 Score=125.31 Aligned_cols=92 Identities=23% Similarity=0.308 Sum_probs=80.1
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
++|+..+.||+|+||.||++... +|..||+|.+..... ...+.|.+|++++++++|||||++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 56788899999999999999964 588999999875422 2345799999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCC
Q 004842 702 MSNGTLRDQLSGIF 715 (728)
Q Consensus 702 ~~~GsL~~~L~~~~ 715 (728)
+++|+|.+++....
T Consensus 85 ~~~~~L~~~l~~~~ 98 (331)
T cd06649 85 MDGGSLDQVLKEAK 98 (331)
T ss_pred CCCCcHHHHHHHcC
Confidence 99999999998654
No 63
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.16 E-value=7.9e-11 Score=128.37 Aligned_cols=91 Identities=22% Similarity=0.256 Sum_probs=78.1
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|...+.||+|+||.||++.. .+|+.||||++.... ....+.+.+|++++.+++|||||++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 577789999999999999985 468899999986432 1223568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
|+++|+|.+++....
T Consensus 82 ~~~gg~L~~~l~~~~ 96 (377)
T cd05629 82 FLPGGDLMTMLIKYD 96 (377)
T ss_pred CCCCCcHHHHHHhcC
Confidence 999999999997643
No 64
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.15 E-value=5e-11 Score=129.74 Aligned_cols=95 Identities=27% Similarity=0.482 Sum_probs=79.8
Q ss_pred hhcCCcccCCceeccCceEEEEEEe------CCCCEEEEEEcccCC-hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeC
Q 004842 621 LATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (728)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 692 (728)
...++|...+.||+|+||.||+|.. ..+..||||+++... ....+.+.+|+.++..+ +|||||+++|+|...
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 3345678889999999999999973 235689999997543 23345789999999999 899999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhcCC
Q 004842 693 GEQMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
+..++|||||++|+|.++++...
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~ 134 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKR 134 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcc
Confidence 99999999999999999998643
No 65
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.15 E-value=8.5e-11 Score=120.66 Aligned_cols=90 Identities=31% Similarity=0.516 Sum_probs=79.3
Q ss_pred CcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+|+..+.||+|+||.||++.++++..+|+|.+.... ...++|.+|+.++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 466678899999999999998888899999986543 2346799999999999999999999999999999999999999
Q ss_pred CCHHHHHhcCC
Q 004842 705 GTLRDQLSGIF 715 (728)
Q Consensus 705 GsL~~~L~~~~ 715 (728)
|+|.++++...
T Consensus 84 ~~L~~~~~~~~ 94 (256)
T cd05114 84 GCLLNYLRQRQ 94 (256)
T ss_pred CcHHHHHHhCc
Confidence 99999998643
No 66
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.15 E-value=9.6e-11 Score=127.87 Aligned_cols=91 Identities=15% Similarity=0.243 Sum_probs=78.6
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
.|...+.||+|+||+||+|.. .+++.||||++..... ...+.+.+|++++.+++|+|||++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 467788999999999999985 4588999999965322 223568999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
|+++|+|.+++....
T Consensus 82 ~~~gg~L~~~l~~~~ 96 (381)
T cd05626 82 YIPGGDMMSLLIRME 96 (381)
T ss_pred cCCCCcHHHHHHhcC
Confidence 999999999997654
No 67
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.15 E-value=9.3e-11 Score=125.30 Aligned_cols=93 Identities=20% Similarity=0.341 Sum_probs=79.8
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
.+|...+.||+|+||.||+|... +|+.||||.+.... ....+.+.+|+.++.+++|||||++++++...+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 45777889999999999999965 58899999986532 122356899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcCCC
Q 004842 700 EFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~ 716 (728)
||+++|+|.+++.....
T Consensus 98 e~~~~~~L~~~l~~~~~ 114 (329)
T PTZ00263 98 EFVVGGELFTHLRKAGR 114 (329)
T ss_pred cCCCCChHHHHHHHcCC
Confidence 99999999999986543
No 68
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.14 E-value=8.6e-11 Score=127.47 Aligned_cols=93 Identities=20% Similarity=0.293 Sum_probs=79.6
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
++|+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++..++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36778899999999999999864 58999999997532 122346789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcCCC
Q 004842 700 EFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~ 716 (728)
||+++|+|.++++....
T Consensus 81 E~~~~g~L~~~l~~~~~ 97 (364)
T cd05599 81 EYLPGGDMMTLLMKKDT 97 (364)
T ss_pred CCCCCcHHHHHHHHcCC
Confidence 99999999999986543
No 69
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.13 E-value=2.6e-11 Score=119.37 Aligned_cols=86 Identities=31% Similarity=0.482 Sum_probs=71.4
Q ss_pred cccCCceeccCceEEEEEEeCC-CCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
|+...++|+|+||.||||.-++ |+.||||++..+.. .-.+--++|++++++++|+|+|.|+.+|.....++||+||+
T Consensus 4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~ 83 (396)
T KOG0593|consen 4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYC 83 (396)
T ss_pred HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeec
Confidence 4455679999999999999654 99999999976432 22345789999999999999999999999999999999999
Q ss_pred CCCCHHHHH
Q 004842 703 SNGTLRDQL 711 (728)
Q Consensus 703 ~~GsL~~~L 711 (728)
+.-=|++.=
T Consensus 84 dhTvL~eLe 92 (396)
T KOG0593|consen 84 DHTVLHELE 92 (396)
T ss_pred chHHHHHHH
Confidence 985454443
No 70
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.13 E-value=1.9e-10 Score=121.48 Aligned_cols=91 Identities=30% Similarity=0.514 Sum_probs=77.0
Q ss_pred CCcccCCceeccCceEEEEEEeCC-----------------CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccce
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD-----------------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSL 685 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-----------------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l 685 (728)
..|...+.||+|+||.||+|..++ +..||||.+..... ....+|.+|++++.+++|||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 456677899999999999997532 33699999876432 334579999999999999999999
Q ss_pred eEEEEeCCeEEEEEecCCCCCHHHHHhcC
Q 004842 686 VGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 686 ~g~~~~~~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
+|++...+..++||||+++|+|.+++...
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 113 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSH 113 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence 99999999999999999999999999653
No 71
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.12 E-value=1.9e-10 Score=118.74 Aligned_cols=92 Identities=23% Similarity=0.319 Sum_probs=79.9
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
.+|+..+.||+|+||.||+|+. .+++.||+|++........+.+.+|+.++.+++|+||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4577789999999999999995 568899999987554444456889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCC
Q 004842 703 SNGTLRDQLSGIF 715 (728)
Q Consensus 703 ~~GsL~~~L~~~~ 715 (728)
++|+|.++++...
T Consensus 89 ~~~~L~~~~~~~~ 101 (267)
T cd06646 89 GGGSLQDIYHVTG 101 (267)
T ss_pred CCCcHHHHHHhcC
Confidence 9999999997543
No 72
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.12 E-value=1.7e-10 Score=123.43 Aligned_cols=91 Identities=31% Similarity=0.488 Sum_probs=78.9
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++..++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 5777889999999999999965 48899999997532 1234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
|+++|+|.++++...
T Consensus 82 ~~~g~~L~~~l~~~~ 96 (333)
T cd05600 82 YVPGGDFRTLLNNLG 96 (333)
T ss_pred CCCCCCHHHHHHHcC
Confidence 999999999997654
No 73
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.12 E-value=2.1e-10 Score=121.41 Aligned_cols=91 Identities=22% Similarity=0.298 Sum_probs=78.8
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
+|+..+.||+|+||.||++... ++..+|+|.++.... ...+++.+|++++.+++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 5778899999999999999854 578899999865422 23456899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCC
Q 004842 703 SNGTLRDQLSGIF 715 (728)
Q Consensus 703 ~~GsL~~~L~~~~ 715 (728)
++|+|.++++...
T Consensus 82 ~~~~L~~~l~~~~ 94 (308)
T cd06615 82 DGGSLDQVLKKAG 94 (308)
T ss_pred CCCcHHHHHHhcC
Confidence 9999999997653
No 74
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.12 E-value=1.7e-10 Score=125.78 Aligned_cols=91 Identities=16% Similarity=0.245 Sum_probs=78.5
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|...+.||+|+||.||+++. .+++.||||.+..... ...+.+.+|++++.+++|+||+++++++...+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 577889999999999999985 4588999999864321 223468899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
|+++|+|.+++....
T Consensus 82 ~~~~g~L~~~i~~~~ 96 (376)
T cd05598 82 YIPGGDMMSLLIRLG 96 (376)
T ss_pred CCCCCcHHHHHHhcC
Confidence 999999999998754
No 75
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.12 E-value=1.6e-10 Score=126.13 Aligned_cols=91 Identities=15% Similarity=0.234 Sum_probs=78.6
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
.|...++||+|+||.||+|.. .+++.||||.+..... ...+.+.+|++++++++|+|||++++++...+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 477789999999999999985 4588999999975321 223568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
||++|+|.+++....
T Consensus 82 ~~~gg~L~~~l~~~~ 96 (382)
T cd05625 82 YIPGGDMMSLLIRMG 96 (382)
T ss_pred CCCCCcHHHHHHhcC
Confidence 999999999998654
No 76
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.12 E-value=9.9e-11 Score=122.77 Aligned_cols=92 Identities=16% Similarity=0.198 Sum_probs=79.0
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 5777889999999999999864 588999999864321 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCCC
Q 004842 701 FMSNGTLRDQLSGIFS 716 (728)
Q Consensus 701 y~~~GsL~~~L~~~~~ 716 (728)
|+++|+|.++++....
T Consensus 82 ~~~~~~L~~~~~~~~~ 97 (291)
T cd05612 82 YVPGGELFSYLRNSGR 97 (291)
T ss_pred CCCCCCHHHHHHHcCC
Confidence 9999999999986543
No 77
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.12 E-value=1.2e-10 Score=127.41 Aligned_cols=95 Identities=25% Similarity=0.457 Sum_probs=79.3
Q ss_pred hhcCCcccCCceeccCceEEEEEEeC------CCCEEEEEEcccCChh-cHHHHHHHHHHHhcCC-CCcccceeEEEEeC
Q 004842 621 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE 692 (728)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~ 692 (728)
...+++...+.||+|+||.||+|.+. .+..||||+++..... ..+.+.+|++++.++. |||||+++|+|...
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 34445777789999999999999853 2457999999764332 2347899999999997 99999999999998
Q ss_pred CeEEEEEecCCCCCHHHHHhcCC
Q 004842 693 GEQMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
+..++||||+++|+|.++++...
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~ 136 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNK 136 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhcc
Confidence 99999999999999999998643
No 78
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.11 E-value=1.9e-10 Score=122.54 Aligned_cols=87 Identities=23% Similarity=0.211 Sum_probs=74.1
Q ss_pred CceeccCceEEEEEEe-CCCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCC
Q 004842 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~G 705 (728)
++||+|+||.||++.. .+|..||+|+++... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4689999999999985 458999999997532 223346788999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCC
Q 004842 706 TLRDQLSGIFS 716 (728)
Q Consensus 706 sL~~~L~~~~~ 716 (728)
+|.+++.....
T Consensus 81 ~L~~~l~~~~~ 91 (323)
T cd05595 81 ELFFHLSRERV 91 (323)
T ss_pred cHHHHHHHcCC
Confidence 99999976543
No 79
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.11 E-value=2.2e-10 Score=122.06 Aligned_cols=86 Identities=24% Similarity=0.228 Sum_probs=73.9
Q ss_pred CceeccCceEEEEEEe-CCCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCC
Q 004842 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~G 705 (728)
++||+|+||.||++.. .+|+.||||+++... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999999985 468899999997532 122346889999999999999999999999999999999999999
Q ss_pred CHHHHHhcCC
Q 004842 706 TLRDQLSGIF 715 (728)
Q Consensus 706 sL~~~L~~~~ 715 (728)
+|.+++....
T Consensus 81 ~L~~~l~~~~ 90 (323)
T cd05571 81 ELFFHLSRER 90 (323)
T ss_pred cHHHHHHHcC
Confidence 9999998654
No 80
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.11 E-value=1.1e-10 Score=114.79 Aligned_cols=96 Identities=21% Similarity=0.279 Sum_probs=81.3
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcH---HHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~---~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
.+|+..+.+|.|+||.|...+.+ .|..+|+|++........ +-..+|..+++.+.||.+|++.+.+.+.+..+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 34667789999999999999864 478899999987544332 34678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcCCCccc
Q 004842 700 EFMSNGTLRDQLSGIFSVIR 719 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~~~~ 719 (728)
||+++|.|+.+|++.....+
T Consensus 124 eyv~GGElFS~Lrk~~rF~e 143 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGRFSE 143 (355)
T ss_pred eccCCccHHHHHHhcCCCCc
Confidence 99999999999998654444
No 81
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.10 E-value=2.1e-10 Score=123.05 Aligned_cols=93 Identities=25% Similarity=0.349 Sum_probs=78.3
Q ss_pred CCcccCCceeccCceEEEEEEeCC--CCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~--g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
++|...+.||+|+||.||+|..+. +..||+|++.... ....+.+.+|++++..++|||||++++++...+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 357778899999999999998543 3689999986432 22235688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcCCC
Q 004842 699 YEFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~~ 716 (728)
|||+++|+|.+++.....
T Consensus 110 ~Ey~~~g~L~~~i~~~~~ 127 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNKR 127 (340)
T ss_pred EeCCCCCcHHHHHHHcCC
Confidence 999999999999986543
No 82
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.09 E-value=1.8e-10 Score=123.61 Aligned_cols=91 Identities=25% Similarity=0.420 Sum_probs=80.3
Q ss_pred CCcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChh---cHHHHHHHHHHHhcCC-CCcccceeEEEEeCCeEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV 698 (728)
..|...+.||+|.||.||++..+. |+.+|+|.+...... ....+.+|+.+|.++. |||||.+.+.+...+..++|
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 456667899999999999999655 999999999765443 2357999999999998 99999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 004842 699 YEFMSNGTLRDQLSGI 714 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~ 714 (728)
||++++|+|++.+...
T Consensus 115 mEL~~GGeLfd~i~~~ 130 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK 130 (382)
T ss_pred EEecCCchHHHHHHHc
Confidence 9999999999999876
No 83
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.09 E-value=1.3e-10 Score=124.56 Aligned_cols=92 Identities=29% Similarity=0.545 Sum_probs=76.2
Q ss_pred cCCcccCCceeccCceEEEEEEe------CCCCEEEEEEcccCCh-hcHHHHHHHHHHHhcC-CCCcccceeEEEEeC-C
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE-G 693 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~-~ 693 (728)
.++|...++||+|+||.||+|.. .++..||||+++.... ...+.+.+|+.++.++ +|||||+++|+|... +
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 45677789999999999999974 2356899999975432 2345799999999999 899999999998764 4
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 004842 694 EQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
..++||||+++|+|.++++..
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~ 106 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAK 106 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhc
Confidence 689999999999999999864
No 84
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.09 E-value=2.4e-10 Score=123.88 Aligned_cols=93 Identities=20% Similarity=0.267 Sum_probs=79.2
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
++|+..+.||+|+||.||++... +++.||||++..... .....+.+|+.++.+++|+|||++++++.+.+..++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36778899999999999999854 588999999965322 22346788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcCCC
Q 004842 700 EFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~ 716 (728)
|||++|+|.+++..+..
T Consensus 81 E~~~gg~L~~~l~~~~~ 97 (363)
T cd05628 81 EFLPGGDMMTLLMKKDT 97 (363)
T ss_pred cCCCCCcHHHHHHhcCC
Confidence 99999999999986544
No 85
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.08 E-value=2.2e-10 Score=117.90 Aligned_cols=90 Identities=29% Similarity=0.521 Sum_probs=79.6
Q ss_pred CCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
++|+..+.||+|+||.||+|...++..||+|.+..... ..+.|.+|+.++++++|+||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 45777889999999999999988888999999875432 34679999999999999999999999998889999999999
Q ss_pred CCCHHHHHhcC
Q 004842 704 NGTLRDQLSGI 714 (728)
Q Consensus 704 ~GsL~~~L~~~ 714 (728)
+|+|.++++..
T Consensus 85 ~~~L~~~l~~~ 95 (261)
T cd05072 85 KGSLLDFLKSD 95 (261)
T ss_pred CCcHHHHHHHh
Confidence 99999999753
No 86
>PLN03150 hypothetical protein; Provisional
Probab=99.08 E-value=2e-10 Score=132.04 Aligned_cols=110 Identities=26% Similarity=0.426 Sum_probs=96.5
Q ss_pred CCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECc
Q 004842 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (728)
Q Consensus 131 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 210 (728)
.++.|+|++|.+.+.+|..++.+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|++.+.+|..++.+++|++|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCC-CCCcEEEcccccCCC
Q 004842 211 NNNLTGYLPPELSEL-PKLLILQLDNNNFEG 240 (728)
Q Consensus 211 ~N~l~~~~~~~l~~l-~~L~~L~L~~N~l~~ 240 (728)
+|++++.+|..+..+ .++..+++.+|....
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc 529 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLC 529 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCcccc
Confidence 999999999888664 467788888887543
No 87
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.08 E-value=4.6e-11 Score=127.40 Aligned_cols=91 Identities=29% Similarity=0.442 Sum_probs=79.8
Q ss_pred CCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
..|..-.+||+|+.|.||.+. ..+++.||||++........+-..+|+.+|+..+|+|||.++..|...+.+|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 345566789999999999997 5568899999998766555556889999999999999999999999899999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.|.+...
T Consensus 353 ~ggsLTDvVt~~ 364 (550)
T KOG0578|consen 353 EGGSLTDVVTKT 364 (550)
T ss_pred CCCchhhhhhcc
Confidence 999999998764
No 88
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.08 E-value=1.8e-10 Score=125.21 Aligned_cols=93 Identities=20% Similarity=0.267 Sum_probs=78.9
Q ss_pred hcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
..++|...+.||+|+||.||++... +++.||+|++.... ....+.|.+|+++++.++||||+++++++...+..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3456778899999999999999864 58899999986422 1223457899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 004842 698 VYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~ 714 (728)
||||+++|+|.++++..
T Consensus 121 v~Ey~~gg~L~~~l~~~ 137 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY 137 (370)
T ss_pred EEcCCCCCcHHHHHHhc
Confidence 99999999999999764
No 89
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.08 E-value=2.4e-10 Score=122.54 Aligned_cols=98 Identities=23% Similarity=0.334 Sum_probs=81.2
Q ss_pred hcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccC----Ch-hcHHHHHHHHHHHhcCC-CCcccceeEEEEeCCe
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG----SL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGE 694 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~----~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~ 694 (728)
....|...+.||+|.||.||.|.. ..|..||||.+... .. ...+...+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 345678889999999999999974 46899999977553 11 12334568999999999 9999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcCCCccc
Q 004842 695 QMLVYEFMSNGTLRDQLSGIFSVIR 719 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~~~~~~ 719 (728)
.++||||+.+|+|++++..++...+
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g~l~E 119 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKGRLKE 119 (370)
T ss_pred EEEEEEecCCccHHHHHHHcCCCCh
Confidence 9999999999999999998554444
No 90
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.08 E-value=3.6e-10 Score=120.73 Aligned_cols=86 Identities=26% Similarity=0.246 Sum_probs=74.0
Q ss_pred CceeccCceEEEEEEe-CCCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCC
Q 004842 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~G 705 (728)
++||+|+||.||++.. .+|+.||||++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999999985 458999999997532 223357889999999999999999999999999999999999999
Q ss_pred CHHHHHhcCC
Q 004842 706 TLRDQLSGIF 715 (728)
Q Consensus 706 sL~~~L~~~~ 715 (728)
+|.+++....
T Consensus 81 ~L~~~l~~~~ 90 (328)
T cd05593 81 ELFFHLSRER 90 (328)
T ss_pred CHHHHHHhcC
Confidence 9999997654
No 91
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.08 E-value=1.8e-11 Score=120.08 Aligned_cols=198 Identities=20% Similarity=0.238 Sum_probs=121.0
Q ss_pred cceeEEECCCCC--------CccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCC---cCC---
Q 004842 82 LHLRELQLLNLN--------LSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTG---SLP--- 147 (728)
Q Consensus 82 ~~l~~L~l~~~~--------l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~---~~p--- 147 (728)
.++..|.++... +...+|-.+.-+++|+.+.+|++.-..+ ..-...-+.|+++.+.+..++. .+|
T Consensus 182 ~~l~~l~vs~~~~p~~~sni~~~~l~f~l~~f~~l~~~~~s~~~~~~i-~~~~~~kptl~t~~v~~s~~~~~~~l~pe~~ 260 (490)
T KOG1259|consen 182 TQLVALVVTPVKDPIDRSNIIPNRLSFNLNAFRNLKTLKFSALSTENI-VDIELLKPTLQTICVHNTTIQDVPSLLPETI 260 (490)
T ss_pred hheeEEEecCCCCCCccccccccccccchHHhhhhheeeeeccchhhe-eceeecCchhheeeeecccccccccccchhh
Confidence 356667665432 1223344455567777777777753311 1112223556666666554431 112
Q ss_pred -----------------ccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECc
Q 004842 148 -----------------EELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (728)
Q Consensus 148 -----------------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 210 (728)
..+.....|+++||++|.|+ .+.++..-+++++.|++++|.+... +.+..+++|++|||+
T Consensus 261 ~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS 337 (490)
T KOG1259|consen 261 LADPSGSEPSTSNGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLS 337 (490)
T ss_pred hcCccCCCCCccCCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecc
Confidence 11223356777778777776 4566666677777778887777633 236677777777777
Q ss_pred CCCCCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEccCCcCccCCC--CCCCCCCcCEEEccCCCCc
Q 004842 211 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQLN 287 (728)
Q Consensus 211 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~--~l~~l~~L~~L~Ls~N~l~ 287 (728)
+|.++. +...-..+.+++.|.|++|.+.. -..+..+.+|..||+++|++..... .++++|.|+.+.|.+|.+.
T Consensus 338 ~N~Ls~-~~Gwh~KLGNIKtL~La~N~iE~---LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 338 GNLLAE-CVGWHLKLGNIKTLKLAQNKIET---LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred cchhHh-hhhhHhhhcCEeeeehhhhhHhh---hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 777762 33333456677777777777742 2446666777777777777765443 5777777777777777776
No 92
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.08 E-value=2.1e-10 Score=118.43 Aligned_cols=92 Identities=27% Similarity=0.458 Sum_probs=77.3
Q ss_pred CCcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC--eEEEEEe
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVYE 700 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~E 700 (728)
.++...+.||+|+||.||.+...+ |...|||.+...+....+...+|+.+|.+++|||||+.+|...... ..++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 346667899999999999999654 8999999987653322456899999999999999999999865544 6899999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
|+++|+|.+++.+.+
T Consensus 97 y~~~GsL~~~~~~~g 111 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYG 111 (313)
T ss_pred ccCCCcHHHHHHHcC
Confidence 999999999999765
No 93
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.08 E-value=3.7e-10 Score=120.81 Aligned_cols=90 Identities=24% Similarity=0.289 Sum_probs=77.5
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|...+.||+|+||.||++... +++.||||.+.... ....+.|.+|+.++..++|+||+++++++...+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 5777899999999999999964 58899999986421 1223468899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
|+++|+|.+++...
T Consensus 82 ~~~g~~L~~~l~~~ 95 (331)
T cd05597 82 YYVGGDLLTLLSKF 95 (331)
T ss_pred cCCCCcHHHHHHHh
Confidence 99999999999753
No 94
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.07 E-value=2e-10 Score=118.14 Aligned_cols=93 Identities=28% Similarity=0.525 Sum_probs=83.2
Q ss_pred hcCCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+..+|+..++||+|+||.||+|...++..+|+|.+.........++.+|+.+++.++|+||+++++++...+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 34567778999999999999999888899999999876554566899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
+++|+|.++++..
T Consensus 84 ~~~~~L~~~~~~~ 96 (261)
T cd05148 84 MEKGSLLAFLRSP 96 (261)
T ss_pred cccCCHHHHHhcC
Confidence 9999999999863
No 95
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.07 E-value=4.4e-10 Score=117.26 Aligned_cols=92 Identities=33% Similarity=0.507 Sum_probs=77.9
Q ss_pred CCcccCCceeccCceEEEEEEeC-----CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeC--CeEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQM 696 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 696 (728)
..|...+.||+|+||.||++.++ ++..||||++........+.|.+|++++++++|||||++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 35667789999999999999753 4789999999776555567899999999999999999999988543 4689
Q ss_pred EEEecCCCCCHHHHHhcCC
Q 004842 697 LVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~ 715 (728)
+||||+++|+|.+++....
T Consensus 84 lv~e~~~~~~L~~~l~~~~ 102 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR 102 (284)
T ss_pred EEEEecCCCCHHHHHHhcC
Confidence 9999999999999997643
No 96
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.07 E-value=3e-10 Score=123.32 Aligned_cols=93 Identities=19% Similarity=0.256 Sum_probs=79.1
Q ss_pred hcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
..++|+..+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.+++.++|||||++++++..++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3456888899999999999999965 47899999986421 1223458899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 004842 698 VYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~ 714 (728)
|||||++|+|.+++...
T Consensus 121 v~Ey~~gg~L~~~l~~~ 137 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY 137 (370)
T ss_pred EEcCCCCCcHHHHHHhc
Confidence 99999999999999764
No 97
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.07 E-value=2.8e-10 Score=118.85 Aligned_cols=92 Identities=26% Similarity=0.312 Sum_probs=78.5
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
++|+..+.||+|+||+||++... +|+.||+|.+.... ....+.|.+|++++..++|+||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 34566688999999999999854 58899999886543 23356799999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCC
Q 004842 702 MSNGTLRDQLSGIF 715 (728)
Q Consensus 702 ~~~GsL~~~L~~~~ 715 (728)
+++|+|.++++...
T Consensus 85 ~~~~~L~~~~~~~~ 98 (284)
T cd06620 85 MDCGSLDRIYKKGG 98 (284)
T ss_pred CCCCCHHHHHHhcc
Confidence 99999999987643
No 98
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.06 E-value=5.2e-10 Score=114.29 Aligned_cols=86 Identities=34% Similarity=0.558 Sum_probs=75.7
Q ss_pred CceeccCceEEEEEEeCCCCEEEEEEcccCChh-cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCHH
Q 004842 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL~ 708 (728)
++||+|+||.||+|..+++..||+|.+...... ....|.+|++++++++||||++++++|...+..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 368999999999999888899999998765332 2347999999999999999999999999999999999999999999
Q ss_pred HHHhcCC
Q 004842 709 DQLSGIF 715 (728)
Q Consensus 709 ~~L~~~~ 715 (728)
+++....
T Consensus 81 ~~~~~~~ 87 (250)
T cd05085 81 SFLRKKK 87 (250)
T ss_pred HHHHhcC
Confidence 9997643
No 99
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.06 E-value=1.9e-11 Score=119.68 Aligned_cols=93 Identities=23% Similarity=0.433 Sum_probs=80.9
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
|+...++|+|+||.|||+..+ .|+.||||++.... +.++.+.|+.+|.+.+.+++|+++|.|.....+|+|||||--
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 555678999999999999865 49999999997543 346899999999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCCcccc
Q 004842 705 GTLRDQLSGIFSVIRH 720 (728)
Q Consensus 705 GsL~~~L~~~~~~~~~ 720 (728)
|+..|.++.++....+
T Consensus 113 GSiSDI~R~R~K~L~E 128 (502)
T KOG0574|consen 113 GSISDIMRARRKPLSE 128 (502)
T ss_pred CcHHHHHHHhcCCccH
Confidence 9999999977655443
No 100
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.06 E-value=5.8e-10 Score=115.18 Aligned_cols=92 Identities=29% Similarity=0.460 Sum_probs=79.2
Q ss_pred CCcccCCceeccCceEEEEEEeCC----CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
++|+..+.||+|+||.||+|.++. ...||||.++.... ....+|.+|+.++.+++|+||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 467888999999999999998743 35799999875433 3345799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcCC
Q 004842 699 YEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~ 715 (728)
|||+++|+|.++++...
T Consensus 84 ~e~~~~~~L~~~~~~~~ 100 (266)
T cd05033 84 TEYMENGSLDKFLREND 100 (266)
T ss_pred EEcCCCCCHHHHHHhcc
Confidence 99999999999998644
No 101
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.06 E-value=3.9e-10 Score=120.62 Aligned_cols=90 Identities=21% Similarity=0.230 Sum_probs=77.3
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|...+.||+|+||.||++... +++.||+|.+.... ....+.|.+|..++...+|+||+++++++...+..++|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 5777889999999999999864 57889999986422 1223458889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
|+++|+|.++++..
T Consensus 82 y~~gg~L~~~l~~~ 95 (331)
T cd05624 82 YYVGGDLLTLLSKF 95 (331)
T ss_pred CCCCCcHHHHHHHh
Confidence 99999999999863
No 102
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.06 E-value=8.2e-11 Score=124.52 Aligned_cols=90 Identities=28% Similarity=0.501 Sum_probs=76.2
Q ss_pred CceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCHHH
Q 004842 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL~~ 709 (728)
+-+|.|+-|.||.|.+ .++.||||+++... ..+|+-+++++|+||+++.|+|.....++||||||+.|-|.+
T Consensus 130 eWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 5689999999999999 47889999997543 257888999999999999999999999999999999999999
Q ss_pred HHhcCCCccc----------cccccccc
Q 004842 710 QLSGIFSVIR----------HSGICFFL 727 (728)
Q Consensus 710 ~L~~~~~~~~----------~~~~~~~~ 727 (728)
.|+....... ..+|.|+|
T Consensus 202 VLka~~~itp~llv~Wsk~IA~GM~YLH 229 (904)
T KOG4721|consen 202 VLKAGRPITPSLLVDWSKGIAGGMNYLH 229 (904)
T ss_pred HHhccCccCHHHHHHHHHHhhhhhHHHH
Confidence 9997654333 45666665
No 103
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=3.1e-10 Score=117.54 Aligned_cols=92 Identities=25% Similarity=0.374 Sum_probs=81.1
Q ss_pred cCCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcH-HHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~-~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
..+|....+||.|..++||+|. .+.+..||||++.-...... ++..+|+..|+.++|||||+++.++..+..+|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 3567778899999999999998 56789999999976544443 678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
||.+|++.+.+...
T Consensus 105 fMa~GS~ldIik~~ 118 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTY 118 (516)
T ss_pred hhcCCcHHHHHHHH
Confidence 99999999999853
No 104
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.05 E-value=7.3e-10 Score=114.29 Aligned_cols=90 Identities=26% Similarity=0.544 Sum_probs=77.8
Q ss_pred cccCCceeccCceEEEEEEeCCCCEEEEEEcccCCh------hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
|...+.||+|+||.||+|...+|+.+|||.++.... ...+.+.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 566789999999999999987899999999864321 11245889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcCC
Q 004842 700 EFMSNGTLRDQLSGIF 715 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~ 715 (728)
||+++|+|.+++....
T Consensus 82 e~~~~~~L~~~l~~~~ 97 (265)
T cd06631 82 EFVPGGSISSILNRFG 97 (265)
T ss_pred ecCCCCcHHHHHHhcC
Confidence 9999999999997643
No 105
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.05 E-value=4.7e-10 Score=119.23 Aligned_cols=86 Identities=27% Similarity=0.398 Sum_probs=73.1
Q ss_pred CceeccCceEEEEEEe----CCCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 630 TQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
+.||+|+||.||++.. .+|+.||+|++..... .....+.+|++++++++||||+++++++...+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 3578999999975322 223457889999999999999999999999999999999999
Q ss_pred CCCHHHHHhcCC
Q 004842 704 NGTLRDQLSGIF 715 (728)
Q Consensus 704 ~GsL~~~L~~~~ 715 (728)
+|+|.+++....
T Consensus 82 ~~~L~~~l~~~~ 93 (318)
T cd05582 82 GGDLFTRLSKEV 93 (318)
T ss_pred CCcHHHHHHHcC
Confidence 999999997654
No 106
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.05 E-value=3.7e-10 Score=117.53 Aligned_cols=93 Identities=28% Similarity=0.399 Sum_probs=81.6
Q ss_pred cCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
.++|+..+.||+|+||.||++... ++..||+|.+........+.|.+|++++++++|+||+++++++..++..++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 345777788999999999999964 5889999999766555566899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCC
Q 004842 702 MSNGTLRDQLSGIF 715 (728)
Q Consensus 702 ~~~GsL~~~L~~~~ 715 (728)
+++|+|.+++....
T Consensus 84 ~~~~~L~~~~~~~~ 97 (280)
T cd06611 84 CDGGALDSIMLELE 97 (280)
T ss_pred cCCCcHHHHHHHhc
Confidence 99999999997643
No 107
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=3.3e-11 Score=124.29 Aligned_cols=208 Identities=20% Similarity=0.242 Sum_probs=142.1
Q ss_pred cCCCCCCEEEccCCCCccCCC--ccccCCCCCcEEeccCCcCCCcCC--ccCCCCCCCCEEEeeccCCCCCCcHhh-hcc
Q 004842 103 GRLSYLTILDFMWNKISGSIP--KEIGNIKSLELLLLNGNELTGSLP--EELGYLPKLDRIQIDQNYISGSLPKSF-ANL 177 (728)
Q Consensus 103 ~~l~~L~~L~Ls~n~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l 177 (728)
+++.+|+...|.++.+. ..+ .....+++++.|||+.|-+....+ .....||+|+.|+|+.|++........ ..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 46778888888887765 223 245678888888888888774432 335678888888888888863322211 256
Q ss_pred CCCCEEEccCccccccc-ccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEE
Q 004842 178 NKTRHFHMNNNSISGQI-PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKL 256 (728)
Q Consensus 178 ~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L 256 (728)
++|+.|.|+.|.++..- -.....+++|+.|+|..|...........-+..|+.|||++|++-....-...+.++.|+.|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 78888888888887432 22345678889999988853333334445567889999999888532222456788889999
Q ss_pred EccCCcCccCC-CC------CCCCCCcCEEEccCCCCcccCCC---CCccCCccEEEccCCCCCCc
Q 004842 257 SLRNCSLQGPM-PD------LSRIPNLGYLDLSSNQLNGSIPP---GRLSLNITTIKLSNNKLTGT 312 (728)
Q Consensus 257 ~L~~n~l~~~~-~~------l~~l~~L~~L~Ls~N~l~~~ip~---~~~~~~L~~L~Ls~N~l~~~ 312 (728)
+++.+.+.... |+ ....++|++|+++.|++. ..+. .....+|+.|.+..|.++..
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccc-cccccchhhccchhhhhhccccccccc
Confidence 99988887642 22 245789999999999885 2222 22336788888888888743
No 108
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.05 E-value=9.7e-11 Score=118.89 Aligned_cols=84 Identities=27% Similarity=0.453 Sum_probs=68.4
Q ss_pred CcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC-----eEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQMLV 698 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lV 698 (728)
.|...+++|.|+||.||+|.+.. ++.||||+........ -+|+++|++++|||||+|+-++.... ..-+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k----nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK----NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC----cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 35567899999999999999644 7899999987654322 37899999999999999999886532 23589
Q ss_pred EecCCCCCHHHHHhc
Q 004842 699 YEFMSNGTLRDQLSG 713 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~ 713 (728)
|||||. +|.++++.
T Consensus 101 leymP~-tL~~~~r~ 114 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRH 114 (364)
T ss_pred HHhchH-HHHHHHHH
Confidence 999998 99999983
No 109
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.04 E-value=6.5e-10 Score=118.59 Aligned_cols=86 Identities=24% Similarity=0.222 Sum_probs=73.5
Q ss_pred CceeccCceEEEEEEe-CCCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCC
Q 004842 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~G 705 (728)
+.||+|+||.||++.. .+|..||+|.+.... ......+.+|++++..++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3689999999999985 468899999997532 222356788999999999999999999999999999999999999
Q ss_pred CHHHHHhcCC
Q 004842 706 TLRDQLSGIF 715 (728)
Q Consensus 706 sL~~~L~~~~ 715 (728)
+|.+++....
T Consensus 81 ~L~~~l~~~~ 90 (325)
T cd05594 81 ELFFHLSRER 90 (325)
T ss_pred cHHHHHHhcC
Confidence 9999997654
No 110
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.04 E-value=4.8e-10 Score=119.83 Aligned_cols=90 Identities=22% Similarity=0.287 Sum_probs=78.3
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|...+.||+|+||.||++... +|+.||||+++.... ...+.+.+|+.++..++|+||+++++++...+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 5777899999999999999854 588999999975322 234568899999999999999999999999899999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
|+++|+|.+++...
T Consensus 82 ~~~~~~L~~~l~~~ 95 (330)
T cd05601 82 YQPGGDLLSLLNRY 95 (330)
T ss_pred CCCCCCHHHHHHHh
Confidence 99999999999865
No 111
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.04 E-value=4.6e-10 Score=115.32 Aligned_cols=89 Identities=34% Similarity=0.533 Sum_probs=78.0
Q ss_pred CcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+|...+.||+|+||.||+|...++..+|||.+.... ...++|.+|+.++.+++||||++++|+|...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 456668899999999999998777789999987543 2346799999999999999999999999988889999999999
Q ss_pred CCHHHHHhcC
Q 004842 705 GTLRDQLSGI 714 (728)
Q Consensus 705 GsL~~~L~~~ 714 (728)
|+|.+++...
T Consensus 84 ~~l~~~i~~~ 93 (256)
T cd05113 84 GCLLNYLREH 93 (256)
T ss_pred CcHHHHHHhc
Confidence 9999999764
No 112
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.04 E-value=4.8e-10 Score=121.80 Aligned_cols=99 Identities=18% Similarity=0.249 Sum_probs=83.2
Q ss_pred hHHHHhhcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEe
Q 004842 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (728)
Q Consensus 616 ~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 691 (728)
..++....++|...+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3445556678999999999999999999865 47899999986421 1223458899999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhcC
Q 004842 692 EGEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 692 ~~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
.+..++||||+++|+|.+++...
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~ 137 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY 137 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc
Confidence 99999999999999999999764
No 113
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.03 E-value=3.1e-10 Score=123.47 Aligned_cols=94 Identities=27% Similarity=0.493 Sum_probs=79.0
Q ss_pred hhcCCcccCCceeccCceEEEEEEeC------CCCEEEEEEcccCChh-cHHHHHHHHHHHhcC-CCCcccceeEEEEeC
Q 004842 621 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (728)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 692 (728)
...++|+..+.||+|+||.||+|... ++..||||+++..... ..+.+.+|+++++.+ +|+|||+++|+|...
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 34456888899999999999998731 2357999999754332 345688999999999 899999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhcC
Q 004842 693 GEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
+..++||||+++|+|.++++..
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~ 136 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKK 136 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhh
Confidence 9999999999999999999764
No 114
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.03 E-value=6.1e-10 Score=114.83 Aligned_cols=86 Identities=23% Similarity=0.381 Sum_probs=72.6
Q ss_pred CceeccCceEEEEEEeCC-------------CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEE
Q 004842 630 TQIGQGGYGKVYKGILPD-------------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~-------------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (728)
+.||+|+||.||+|++.+ ...||+|.+..........|.+|+.+++.++|||||+++|++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 358999999999998532 2258999887654444567899999999999999999999999988999
Q ss_pred EEEecCCCCCHHHHHhcCC
Q 004842 697 LVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~ 715 (728)
+||||+++|+|..+++.+.
T Consensus 81 lv~e~~~~~~l~~~~~~~~ 99 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS 99 (262)
T ss_pred EEEecccCCCHHHHHHhcC
Confidence 9999999999999998643
No 115
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.03 E-value=3.8e-10 Score=121.66 Aligned_cols=90 Identities=24% Similarity=0.325 Sum_probs=78.7
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++..++|+||+++++++...+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 5777889999999999999964 589999999975321 234578999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
|+++|+|.+++...
T Consensus 82 ~~~~~~L~~~l~~~ 95 (350)
T cd05573 82 YMPGGDLMNLLIRK 95 (350)
T ss_pred CCCCCCHHHHHHHc
Confidence 99999999999875
No 116
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.03 E-value=5.4e-10 Score=118.66 Aligned_cols=91 Identities=27% Similarity=0.502 Sum_probs=75.7
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCC----EEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
.+|+..+.||+|+||.||+|++. +|. .||||.++... ....++|.+|+.+++.++|+||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 45788899999999999999853 343 48999987543 23456799999999999999999999999764 5779
Q ss_pred EEecCCCCCHHHHHhcCC
Q 004842 698 VYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~~ 715 (728)
|+||+++|+|.++++...
T Consensus 86 v~e~~~~g~l~~~l~~~~ 103 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK 103 (316)
T ss_pred eeecCCCCCHHHHHHhcc
Confidence 999999999999998754
No 117
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.03 E-value=6.3e-10 Score=117.96 Aligned_cols=85 Identities=22% Similarity=0.262 Sum_probs=72.9
Q ss_pred eeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCH
Q 004842 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (728)
Q Consensus 632 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (728)
||+|+||.||+|... +++.||+|.+.... ......+.+|++++.+++|||||++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999864 47899999986432 22345688999999999999999999999999999999999999999
Q ss_pred HHHHhcCCC
Q 004842 708 RDQLSGIFS 716 (728)
Q Consensus 708 ~~~L~~~~~ 716 (728)
.+++.....
T Consensus 81 ~~~l~~~~~ 89 (312)
T cd05585 81 FHHLQREGR 89 (312)
T ss_pred HHHHHhcCC
Confidence 999976543
No 118
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.03 E-value=3.5e-11 Score=125.35 Aligned_cols=97 Identities=25% Similarity=0.422 Sum_probs=80.1
Q ss_pred CcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcHHH--HHHHHHHHhcCC-CCcccceeEEEEeCC-eEEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE--FLTEIQFLSRLH-HRNLVSLVGYCDEEG-EQMLVY 699 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~--f~~E~~~l~~l~-H~niv~l~g~~~~~~-~~~lV~ 699 (728)
.|...+.+|.|.||.||+|+ ...|..||||+++..-. ..++ =.||+..++++. |||||++..++.+.+ .+++||
T Consensus 11 RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 11 RYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 35566889999999999998 45688999999976422 2333 478999999998 999999999998887 899999
Q ss_pred ecCCCCCHHHHHhcCCCccccccc
Q 004842 700 EFMSNGTLRDQLSGIFSVIRHSGI 723 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~~~~~~~~ 723 (728)
|||+- +|++.++++.....+..+
T Consensus 90 E~Md~-NLYqLmK~R~r~fse~~i 112 (538)
T KOG0661|consen 90 EFMDC-NLYQLMKDRNRLFSESDI 112 (538)
T ss_pred Hhhhh-hHHHHHhhcCCcCCHHHH
Confidence 99986 999999988776664443
No 119
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.03 E-value=7e-10 Score=119.62 Aligned_cols=94 Identities=28% Similarity=0.360 Sum_probs=81.4
Q ss_pred hcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
....|.....||+|.|+.|..|.. ..|..||+|.+++... ...+.+.+|+++|..+.|||||+++.+...+..+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 345677789999999999999985 3589999999987533 2234589999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcCC
Q 004842 699 YEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~ 715 (728)
|||+.+|++++||....
T Consensus 134 ~eya~~ge~~~yl~~~g 150 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHG 150 (596)
T ss_pred EEeccCchhHHHHHhcc
Confidence 99999999999998654
No 120
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.03 E-value=7.1e-10 Score=114.62 Aligned_cols=92 Identities=28% Similarity=0.474 Sum_probs=77.7
Q ss_pred CCcccCCceeccCceEEEEEEeC----CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
.+|...+.||+|+||.||+|... .+..+|+|.++.... ...+.|.+|+.++.+++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 35667789999999999999853 234799999875432 2345799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcCC
Q 004842 699 YEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~ 715 (728)
|||+++|+|.+++....
T Consensus 84 ~e~~~~~~L~~~~~~~~ 100 (267)
T cd05066 84 TEYMENGSLDAFLRKHD 100 (267)
T ss_pred EEcCCCCCHHHHHHhcC
Confidence 99999999999998653
No 121
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.03 E-value=6.6e-10 Score=114.05 Aligned_cols=90 Identities=31% Similarity=0.530 Sum_probs=78.5
Q ss_pred CcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+|+..+.||+|+||.||+|..+++..+|+|.+..... ...+|.+|++++++++|+||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 4667789999999999999987777899999865432 345789999999999999999999999988999999999999
Q ss_pred CCHHHHHhcCC
Q 004842 705 GTLRDQLSGIF 715 (728)
Q Consensus 705 GsL~~~L~~~~ 715 (728)
|+|.++++...
T Consensus 84 ~~L~~~l~~~~ 94 (256)
T cd05059 84 GCLLNYLRERK 94 (256)
T ss_pred CCHHHHHHhcc
Confidence 99999998643
No 122
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.02 E-value=2.7e-10 Score=123.04 Aligned_cols=86 Identities=29% Similarity=0.443 Sum_probs=73.0
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
|+..+.||+|+||.||+|+.. +|+.||||.+..... ...+.|.+|++++++++|+|||++++++...+..++|||||+
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 155 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD 155 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence 334578999999999999854 589999999865432 234579999999999999999999999999999999999999
Q ss_pred CCCHHHHH
Q 004842 704 NGTLRDQL 711 (728)
Q Consensus 704 ~GsL~~~L 711 (728)
+|+|.+..
T Consensus 156 ~~~L~~~~ 163 (353)
T PLN00034 156 GGSLEGTH 163 (353)
T ss_pred CCcccccc
Confidence 99987643
No 123
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.02 E-value=5.4e-10 Score=115.42 Aligned_cols=91 Identities=25% Similarity=0.352 Sum_probs=78.8
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
+|...+.||+|+||.||+|.. .+++.||+|.++.........+.+|+.++..++||||+++++++...+..++|+||++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence 466668899999999999985 4588999999876544444568899999999999999999999999999999999999
Q ss_pred CCCHHHHHhcCC
Q 004842 704 NGTLRDQLSGIF 715 (728)
Q Consensus 704 ~GsL~~~L~~~~ 715 (728)
+|+|.++++...
T Consensus 90 ~~~L~~~~~~~~ 101 (267)
T cd06645 90 GGSLQDIYHVTG 101 (267)
T ss_pred CCcHHHHHHhcC
Confidence 999999987654
No 124
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.02 E-value=6.7e-10 Score=115.54 Aligned_cols=91 Identities=30% Similarity=0.577 Sum_probs=78.7
Q ss_pred CCcccCCceeccCceEEEEEEeCC------CCEEEEEEcccCChh-cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (728)
.+|...+.||+|+||.||+|...+ +..||||.+...... ..++|.+|++++.+++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 346677899999999999998633 478999999765443 3568999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhcC
Q 004842 697 LVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~ 714 (728)
+||||+++|+|.++++..
T Consensus 85 lv~e~~~~~~L~~~i~~~ 102 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSH 102 (280)
T ss_pred EEEecCCCCCHHHHHHhc
Confidence 999999999999999754
No 125
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.02 E-value=9.2e-10 Score=113.88 Aligned_cols=84 Identities=35% Similarity=0.504 Sum_probs=72.2
Q ss_pred CceeccCceEEEEEEeCC---CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCC
Q 004842 630 TQIGQGGYGKVYKGILPD---GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~---g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~G 705 (728)
+.||+|+||.||+|...+ +..+|+|.++.... .....|.+|+.++++++||||++++|++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998643 35799999875432 33457999999999999999999999999888999999999999
Q ss_pred CHHHHHhc
Q 004842 706 TLRDQLSG 713 (728)
Q Consensus 706 sL~~~L~~ 713 (728)
+|.++++.
T Consensus 81 ~L~~~l~~ 88 (269)
T cd05087 81 DLKGYLRS 88 (269)
T ss_pred cHHHHHHH
Confidence 99999975
No 126
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.02 E-value=7.4e-10 Score=119.95 Aligned_cols=92 Identities=20% Similarity=0.264 Sum_probs=78.7
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|+..+.||+|+||.||++... +++.||||.++... ....+.+.+|+.++.+++|+||+++++++...+..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 5777899999999999999864 58899999996432 1223468889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCCC
Q 004842 701 FMSNGTLRDQLSGIFS 716 (728)
Q Consensus 701 y~~~GsL~~~L~~~~~ 716 (728)
|+++|+|.+++.....
T Consensus 82 ~~~gg~L~~~l~~~~~ 97 (360)
T cd05627 82 FLPGGDMMTLLMKKDT 97 (360)
T ss_pred CCCCccHHHHHHhcCC
Confidence 9999999999986543
No 127
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.02 E-value=8.3e-10 Score=113.65 Aligned_cols=92 Identities=32% Similarity=0.562 Sum_probs=81.2
Q ss_pred cCCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
+++|+..+.||+|+||.||+|...+++.||||.++.... ..++|.+|++++++++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 456778899999999999999987788899999976432 3567999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCC
Q 004842 703 SNGTLRDQLSGIF 715 (728)
Q Consensus 703 ~~GsL~~~L~~~~ 715 (728)
++|+|.+++....
T Consensus 84 ~~~~L~~~~~~~~ 96 (261)
T cd05068 84 KYGSLLEYLQGGA 96 (261)
T ss_pred cCCcHHHHHhccC
Confidence 9999999997643
No 128
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.02 E-value=8.2e-10 Score=118.17 Aligned_cols=90 Identities=23% Similarity=0.275 Sum_probs=77.0
Q ss_pred CcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|...++||+|+||.||++..+. ++.||+|.+.... ....+.|.+|+.++..++|+||+++++++...+..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 57778999999999999999754 7789999986422 1223458899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
|+++|+|.++++..
T Consensus 82 y~~~g~L~~~l~~~ 95 (332)
T cd05623 82 YYVGGDLLTLLSKF 95 (332)
T ss_pred ccCCCcHHHHHHHh
Confidence 99999999999763
No 129
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.02 E-value=8.8e-10 Score=115.93 Aligned_cols=91 Identities=24% Similarity=0.387 Sum_probs=80.4
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
.+|+..+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 4577788999999999999985 568999999997655445567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.+++...
T Consensus 99 ~~~~L~~~~~~~ 110 (297)
T cd06656 99 AGGSLTDVVTET 110 (297)
T ss_pred CCCCHHHHHHhC
Confidence 999999998754
No 130
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.01 E-value=1e-09 Score=114.76 Aligned_cols=88 Identities=26% Similarity=0.448 Sum_probs=75.8
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
|...+.||+|+||.||+|.. .+|+.||||.+..... .....+.+|+.++.+++|+||+++.+++...+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 56678999999999999985 5689999999864322 2234688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhc
Q 004842 702 MSNGTLRDQLSG 713 (728)
Q Consensus 702 ~~~GsL~~~L~~ 713 (728)
|++|+|.+++..
T Consensus 82 ~~~g~L~~~~~~ 93 (285)
T cd05631 82 MNGGDLKFHIYN 93 (285)
T ss_pred cCCCcHHHHHHh
Confidence 999999988864
No 131
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.01 E-value=9.4e-10 Score=114.99 Aligned_cols=89 Identities=27% Similarity=0.461 Sum_probs=76.2
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
|+..++||+|+||.||++.. .+++.||||++..... .....+.+|+.++++++|+|||++++++..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 66678999999999999985 4588999999965322 2234578999999999999999999999988999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
+++|+|.+++...
T Consensus 82 ~~~~~L~~~~~~~ 94 (285)
T cd05605 82 MNGGDLKFHIYNM 94 (285)
T ss_pred cCCCcHHHHHHhc
Confidence 9999999998653
No 132
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.01 E-value=7.2e-10 Score=115.02 Aligned_cols=92 Identities=28% Similarity=0.518 Sum_probs=78.5
Q ss_pred CCcccCCceeccCceEEEEEEeC------CCCEEEEEEcccCChh-cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (728)
++|+....||+|+||.||+|..+ +...||+|.+...... ..++|.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46777889999999999999853 2457999998754433 3467999999999999999999999998888999
Q ss_pred EEEecCCCCCHHHHHhcCC
Q 004842 697 LVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~ 715 (728)
+||||+++|+|.++++...
T Consensus 85 lv~e~~~~~~L~~~i~~~~ 103 (275)
T cd05046 85 MILEYTDLGDLKQFLRATK 103 (275)
T ss_pred EEEEecCCCcHHHHHHhcc
Confidence 9999999999999998644
No 133
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.01 E-value=1.8e-11 Score=123.11 Aligned_cols=137 Identities=18% Similarity=0.229 Sum_probs=62.2
Q ss_pred CCCCCCCEEEeeccCCCCCCcHh----hhccCCCCEEEccCcccccccc-------------cccCCCCCCcEEECcCCC
Q 004842 151 GYLPKLDRIQIDQNYISGSLPKS----FANLNKTRHFHMNNNSISGQIP-------------PELSRLPSLVHMLLDNNN 213 (728)
Q Consensus 151 ~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~p-------------~~~~~l~~L~~L~L~~N~ 213 (728)
...++|+.|+||+|-+...-+.. +..++.|++|+|.+|.+...-. ...+.-+.|+.+...+|+
T Consensus 89 ~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNr 168 (382)
T KOG1909|consen 89 LGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNR 168 (382)
T ss_pred hcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccc
Confidence 34456666666666654333332 3345666666666666542111 112223455555555555
Q ss_pred CCCCC----CcCCCCCCCCcEEEcccccCCCCC---CcccccCCCCCcEEEccCCcCccCCC-----CCCCCCCcCEEEc
Q 004842 214 LTGYL----PPELSELPKLLILQLDNNNFEGTT---IPASYSNMSKLLKLSLRNCSLQGPMP-----DLSRIPNLGYLDL 281 (728)
Q Consensus 214 l~~~~----~~~l~~l~~L~~L~L~~N~l~~~~---~p~~~~~l~~L~~L~L~~n~l~~~~~-----~l~~l~~L~~L~L 281 (728)
+.... ...|...+.|+.+.+..|.+.... +-..+..+++|+.|||++|-++..-. .++.+++|+.|++
T Consensus 169 len~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l 248 (382)
T KOG1909|consen 169 LENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNL 248 (382)
T ss_pred cccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecc
Confidence 54221 112333445555555555543211 11234445555555555555542111 2344445555555
Q ss_pred cCCCCc
Q 004842 282 SSNQLN 287 (728)
Q Consensus 282 s~N~l~ 287 (728)
++|.+.
T Consensus 249 ~dcll~ 254 (382)
T KOG1909|consen 249 GDCLLE 254 (382)
T ss_pred cccccc
Confidence 555443
No 134
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.01 E-value=1e-09 Score=112.34 Aligned_cols=86 Identities=33% Similarity=0.537 Sum_probs=74.4
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCH
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (728)
+.||+|+||.||+|... +++.||+|.+.... ......|.+|++++++++|+||++++++|...+..++||||+++|+|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36899999999999864 68899999886532 23345799999999999999999999999999999999999999999
Q ss_pred HHHHhcCC
Q 004842 708 RDQLSGIF 715 (728)
Q Consensus 708 ~~~L~~~~ 715 (728)
.++++...
T Consensus 81 ~~~~~~~~ 88 (252)
T cd05084 81 LTFLRTEG 88 (252)
T ss_pred HHHHHhCC
Confidence 99997643
No 135
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.01 E-value=1.1e-09 Score=114.30 Aligned_cols=90 Identities=29% Similarity=0.526 Sum_probs=76.8
Q ss_pred CCcccCCceeccCceEEEEEEe-----CCCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
.+|+..+.||+|+||.||+|.. .++..||+|.+.... ....++|.+|++++++++|+||++++|++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3466678999999999999984 245789999997533 2334679999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhc
Q 004842 698 VYEFMSNGTLRDQLSG 713 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~ 713 (728)
||||+++|+|.+++..
T Consensus 85 v~e~~~~~~L~~~l~~ 100 (283)
T cd05090 85 LFEYLNQGDLHEFLIM 100 (283)
T ss_pred EEEcCCCCcHHHHHHh
Confidence 9999999999999964
No 136
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.00 E-value=2.5e-10 Score=123.67 Aligned_cols=85 Identities=32% Similarity=0.517 Sum_probs=74.9
Q ss_pred cCCceeccCceEEEEEEeCC--CC--EEEEEEcccCChh-cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 628 SSTQIGQGGYGKVYKGILPD--GT--VVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 628 ~~~~iG~G~fg~Vy~~~~~~--g~--~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
..++||+|.||.|++|.|.. |+ .||||+++..... ...+|.+|+.+|-+++|+|+|+|+|+..+ ...++|+|.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 34789999999999999853 54 5899999876544 45789999999999999999999999987 7789999999
Q ss_pred CCCCHHHHHhc
Q 004842 703 SNGTLRDQLSG 713 (728)
Q Consensus 703 ~~GsL~~~L~~ 713 (728)
+.|+|.+.|++
T Consensus 193 plGSLldrLrk 203 (1039)
T KOG0199|consen 193 PLGSLLDRLRK 203 (1039)
T ss_pred ccchHHHHHhh
Confidence 99999999998
No 137
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.00 E-value=1.3e-09 Score=111.63 Aligned_cols=90 Identities=30% Similarity=0.507 Sum_probs=77.8
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC-----hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
|+..+.||+|+||.||+|... ++..||+|.+.... ....+.|.+|+.++++++|+||+++++++...+..++||
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 556788999999999999975 68999999886432 123457999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcCC
Q 004842 700 EFMSNGTLRDQLSGIF 715 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~ 715 (728)
||+++++|.++++...
T Consensus 82 e~~~~~~L~~~~~~~~ 97 (258)
T cd06632 82 ELVPGGSLAKLLKKYG 97 (258)
T ss_pred EecCCCcHHHHHHhcC
Confidence 9999999999997643
No 138
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.00 E-value=1.1e-09 Score=116.70 Aligned_cols=87 Identities=25% Similarity=0.403 Sum_probs=73.6
Q ss_pred CceeccCceEEEEEEe----CCCCEEEEEEcccCCh----hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 630 TQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+.||+|+||.||++.. ..++.||||.++.... .....+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999974 3478999999875321 2234578999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCCC
Q 004842 702 MSNGTLRDQLSGIFS 716 (728)
Q Consensus 702 ~~~GsL~~~L~~~~~ 716 (728)
+++|+|.+++.....
T Consensus 82 ~~~~~L~~~~~~~~~ 96 (323)
T cd05584 82 LSGGELFMHLEREGI 96 (323)
T ss_pred CCCchHHHHHHHcCC
Confidence 999999999976543
No 139
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.00 E-value=3.5e-10 Score=122.36 Aligned_cols=101 Identities=22% Similarity=0.296 Sum_probs=86.1
Q ss_pred cccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChh---cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 626 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
|..++.+|+|+.|.|..|+ ...|+.+|||.+...... ......+|+.+|+-+.|||++++++++.+..++|+|.||
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 4556889999999999998 456999999999765221 234578999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCCCcccccccccc
Q 004842 702 MSNGTLRDQLSGIFSVIRHSGICFF 726 (728)
Q Consensus 702 ~~~GsL~~~L~~~~~~~~~~~~~~~ 726 (728)
|++|.|++||..++...+.+++.|+
T Consensus 94 v~gGELFdylv~kG~l~e~eaa~ff 118 (786)
T KOG0588|consen 94 VPGGELFDYLVRKGPLPEREAAHFF 118 (786)
T ss_pred cCCchhHHHHHhhCCCCCHHHHHHH
Confidence 9999999999998887776666554
No 140
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.00 E-value=2e-10 Score=125.43 Aligned_cols=88 Identities=33% Similarity=0.561 Sum_probs=74.0
Q ss_pred ccCCceeccCceEEEEEE-eCCCCEEEEEEcccC-ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC------eEEEE
Q 004842 627 NSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------EQMLV 698 (728)
Q Consensus 627 ~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~lV 698 (728)
...+.+|+|+||.||+|. -..|+.||||.++.. .....+.+.+|+++|++++|+|||++.|.-.+.. ...+|
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 345789999999999999 556999999999764 3344567999999999999999999999865433 46899
Q ss_pred EecCCCCCHHHHHhcC
Q 004842 699 YEFMSNGTLRDQLSGI 714 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~ 714 (728)
||||.+|||+..|...
T Consensus 96 mEyC~gGsL~~~L~~P 111 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSP 111 (732)
T ss_pred EeecCCCcHHHHhcCc
Confidence 9999999999999864
No 141
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.00 E-value=1.5e-09 Score=112.94 Aligned_cols=89 Identities=25% Similarity=0.380 Sum_probs=76.8
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
|+..+.||+|+||.||+|.. .++..||||...... ....+.|.+|++++.+++|+||+++++++..++..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 55668899999999999985 458899999986433 2334578999999999999999999999999999999999999
Q ss_pred CCCHHHHHhcC
Q 004842 704 NGTLRDQLSGI 714 (728)
Q Consensus 704 ~GsL~~~L~~~ 714 (728)
+|+|.+++...
T Consensus 86 ~~~l~~~i~~~ 96 (277)
T cd06641 86 GGSALDLLEPG 96 (277)
T ss_pred CCcHHHHHhcC
Confidence 99999999754
No 142
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.00 E-value=9e-10 Score=112.97 Aligned_cols=90 Identities=32% Similarity=0.492 Sum_probs=79.7
Q ss_pred CCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
++|...+.||+|+||.||+|... |+.||||.+..... ..+++.+|+.++++++|+||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 45777899999999999999874 78999999976544 45679999999999999999999999998889999999999
Q ss_pred CCCHHHHHhcCC
Q 004842 704 NGTLRDQLSGIF 715 (728)
Q Consensus 704 ~GsL~~~L~~~~ 715 (728)
+|+|.+++....
T Consensus 84 ~~~L~~~~~~~~ 95 (256)
T cd05039 84 KGSLVDYLRSRG 95 (256)
T ss_pred CCcHHHHHHhcC
Confidence 999999997653
No 143
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.00 E-value=9.3e-10 Score=115.16 Aligned_cols=92 Identities=29% Similarity=0.503 Sum_probs=77.7
Q ss_pred hcCCcccCCceeccCceEEEEEEeCC------CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCe
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 694 (728)
.+++|+..+.||+|+||.||+|..++ +..||+|.+..... ....+|.+|+.++++++|+||+++++++...+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 34567788999999999999997532 45799999865432 233468899999999999999999999998899
Q ss_pred EEEEEecCCCCCHHHHHhc
Q 004842 695 QMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~ 713 (728)
.++||||+++|+|.++++.
T Consensus 84 ~~lv~e~~~~g~L~~~l~~ 102 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRS 102 (288)
T ss_pred cEEEEeCCCCCCHHHHHHH
Confidence 9999999999999999975
No 144
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.99 E-value=7.3e-11 Score=115.85 Aligned_cols=208 Identities=19% Similarity=0.186 Sum_probs=91.7
Q ss_pred CCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccC-cccccccccccCC
Q 004842 122 IPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN-NSISGQIPPELSR 200 (728)
Q Consensus 122 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~ 200 (728)
+|-.+.-+++|+.+.++.+.-.. +-+....-|.|+++...+..++.. | .+-....+....-.. .-..|..-..+..
T Consensus 206 l~f~l~~f~~l~~~~~s~~~~~~-i~~~~~~kptl~t~~v~~s~~~~~-~-~l~pe~~~~D~~~~E~~t~~G~~~~~~dT 282 (490)
T KOG1259|consen 206 LSFNLNAFRNLKTLKFSALSTEN-IVDIELLKPTLQTICVHNTTIQDV-P-SLLPETILADPSGSEPSTSNGSALVSADT 282 (490)
T ss_pred cccchHHhhhhheeeeeccchhh-eeceeecCchhheeeeeccccccc-c-cccchhhhcCccCCCCCccCCceEEecch
Confidence 34444455666666666655431 122222335677777665544321 1 111111111111110 0112222223333
Q ss_pred CCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEccCCcCccCCCCCCCCCCcCEEE
Q 004842 201 LPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLD 280 (728)
Q Consensus 201 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~ 280 (728)
+..|+++||++|.|+ .+.+++.-+|+++.|++++|.+.. + ..+..+++|+.|||++|.++.....-..+-
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~--v-~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLG------ 352 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT--V-QNLAELPQLQLLDLSGNLLAECVGWHLKLG------ 352 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceee--e-hhhhhcccceEeecccchhHhhhhhHhhhc------
Confidence 445555555555555 344444555555555555555532 1 224444455555555554443222112233
Q ss_pred ccCCCCcccCCCCCccCCccEEEccCCCCCCcCchhccCCccCceeecccccCcccC-CcchhhhccCCCCCCcEEECcC
Q 004842 281 LSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI-PSSIWQSRTLNATETFILDFQN 359 (728)
Q Consensus 281 Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~i-p~~~~~~~~l~~~~L~~L~l~~ 359 (728)
++++|.|+.|.|... ..+..+-+|..||+++|+|.... -.+++ +++-|+.+.|.+
T Consensus 353 -----------------NIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG-----~LPCLE~l~L~~ 408 (490)
T KOG1259|consen 353 -----------------NIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIG-----NLPCLETLRLTG 408 (490)
T ss_pred -----------------CEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccc-----cccHHHHHhhcC
Confidence 445555555554422 23444555555555555554211 12233 445555556666
Q ss_pred CcCCCcC
Q 004842 360 NNLTNIS 366 (728)
Q Consensus 360 N~l~~~~ 366 (728)
|.+.+++
T Consensus 409 NPl~~~v 415 (490)
T KOG1259|consen 409 NPLAGSV 415 (490)
T ss_pred CCccccc
Confidence 6665543
No 145
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=98.99 E-value=1.1e-09 Score=112.58 Aligned_cols=91 Identities=34% Similarity=0.579 Sum_probs=80.8
Q ss_pred cCCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
.++|...++||+|+||.||+|..+++..||||.+..... ..+++.+|+.++++++|+||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 456778899999999999999987788899999975432 3467999999999999999999999998888999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.++++..
T Consensus 84 ~~~~L~~~i~~~ 95 (261)
T cd05034 84 SKGSLLDFLKSG 95 (261)
T ss_pred CCCCHHHHHhcc
Confidence 999999999864
No 146
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.99 E-value=2.3e-10 Score=108.36 Aligned_cols=110 Identities=30% Similarity=0.353 Sum_probs=29.9
Q ss_pred ccCCCCCCEEEccCCCCccCCCcccc-CCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCC
Q 004842 102 IGRLSYLTILDFMWNKISGSIPKEIG-NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKT 180 (728)
Q Consensus 102 ~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 180 (728)
+.+..++++|+|.+|.|+.+ +.++ .+.+|+.|+|++|.|+.. +.+..+++|++|++++|+|+.+.+.....+++|
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L 90 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNL 90 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT-
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcC
Confidence 33445567777777777632 2344 466777777777777633 246667777777777777765433222356677
Q ss_pred CEEEccCccccccc-ccccCCCCCCcEEECcCCCCC
Q 004842 181 RHFHMNNNSISGQI-PPELSRLPSLVHMLLDNNNLT 215 (728)
Q Consensus 181 ~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~ 215 (728)
+.|+|++|+|...- -..+..+++|+.|+|.+|.++
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 77777777665321 123344555555555555544
No 147
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=98.99 E-value=9.5e-10 Score=113.75 Aligned_cols=91 Identities=30% Similarity=0.514 Sum_probs=77.3
Q ss_pred CcccCCceeccCceEEEEEEeCC-C---CEEEEEEcccC-ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPD-G---TVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~-g---~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
++...+.||+|+||.||+|.... + ..||||.+... .....++|..|+.++++++||||+++.+++..++..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 35667899999999999998643 3 36999999754 2333568999999999999999999999999889999999
Q ss_pred ecCCCCCHHHHHhcCC
Q 004842 700 EFMSNGTLRDQLSGIF 715 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~ 715 (728)
||+++|+|.++++...
T Consensus 85 e~~~~~~L~~~l~~~~ 100 (269)
T cd05065 85 EFMENGALDSFLRQND 100 (269)
T ss_pred ecCCCCcHHHHHhhCC
Confidence 9999999999998643
No 148
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.99 E-value=1.3e-09 Score=114.69 Aligned_cols=91 Identities=22% Similarity=0.380 Sum_probs=79.7
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
..|+..+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++......++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 3566778899999999999984 458899999997655545567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.++++..
T Consensus 100 ~~~~L~~~~~~~ 111 (296)
T cd06654 100 AGGSLTDVVTET 111 (296)
T ss_pred CCCCHHHHHHhc
Confidence 999999999754
No 149
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.99 E-value=1.3e-10 Score=110.05 Aligned_cols=85 Identities=29% Similarity=0.438 Sum_probs=16.3
Q ss_pred cCCCCCcEEeccCCcCCCcCCccCC-CCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCc
Q 004842 127 GNIKSLELLLLNGNELTGSLPEELG-YLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV 205 (728)
Q Consensus 127 ~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 205 (728)
.+..++++|+|.+|.|+.+ +.++ .+.+|+.|+|++|.|+.. +.+..+++|+.|++++|.|+...+.....+++|+
T Consensus 16 ~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQ 91 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--
T ss_pred ccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCC
Confidence 3444556666666666532 2333 355566666666655533 1344455555555555555432111112344555
Q ss_pred EEECcCCCCC
Q 004842 206 HMLLDNNNLT 215 (728)
Q Consensus 206 ~L~L~~N~l~ 215 (728)
+|++++|+|.
T Consensus 92 ~L~L~~N~I~ 101 (175)
T PF14580_consen 92 ELYLSNNKIS 101 (175)
T ss_dssp EEE-TTS---
T ss_pred EEECcCCcCC
Confidence 5555555544
No 150
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=98.99 E-value=1.6e-09 Score=115.70 Aligned_cols=87 Identities=25% Similarity=0.284 Sum_probs=73.3
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
++||+|+||.||++... +++.||||.++.... ...+.+.+|..++.++ +|||||++++++...+..++|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999864 588999999975322 2234588899999988 799999999999999999999999999
Q ss_pred CCHHHHHhcCCC
Q 004842 705 GTLRDQLSGIFS 716 (728)
Q Consensus 705 GsL~~~L~~~~~ 716 (728)
|+|.+++.....
T Consensus 81 g~L~~~~~~~~~ 92 (329)
T cd05588 81 GDLMFHMQRQRK 92 (329)
T ss_pred CCHHHHHHHcCC
Confidence 999999876543
No 151
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.98 E-value=1.5e-09 Score=114.52 Aligned_cols=92 Identities=24% Similarity=0.376 Sum_probs=77.7
Q ss_pred cCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
.++|...+.||+|+||.||+|... +++.||||++..... .....+.+|+.++++++|||||++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 356888899999999999999965 588999999875432 223467899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
|++ |+|.+++....
T Consensus 84 ~~~-~~l~~~~~~~~ 97 (303)
T cd07869 84 YVH-TDLCQYMDKHP 97 (303)
T ss_pred CCC-cCHHHHHHhCC
Confidence 996 68988887643
No 152
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=98.98 E-value=1.3e-09 Score=112.57 Aligned_cols=91 Identities=24% Similarity=0.402 Sum_probs=77.9
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh------hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
+|+..+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++|+|||++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 367778999999999999984 5688999999864321 123578999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcCC
Q 004842 698 VYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~~ 715 (728)
||||+++|+|.+++....
T Consensus 81 v~e~~~~~~L~~~l~~~~ 98 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG 98 (268)
T ss_pred EEeccCCCcHHHHHHHhC
Confidence 999999999999997644
No 153
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=98.98 E-value=1.2e-09 Score=113.03 Aligned_cols=90 Identities=27% Similarity=0.426 Sum_probs=75.6
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChh----------cHHHHHHHHHHHhcCCCCcccceeEEEEeCCe
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ----------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~----------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 694 (728)
|...+.||+|+||.||+|.. .+|+.||||.++..... ..+.+.+|+.++++++|+|++++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 45678899999999999985 45889999988532110 12368889999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcCC
Q 004842 695 QMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
.++||||+++|+|.++++...
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~ 103 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTYG 103 (272)
T ss_pred eEEEEecCCCCcHHHHHhhcc
Confidence 999999999999999998753
No 154
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=98.98 E-value=1.6e-09 Score=113.31 Aligned_cols=91 Identities=31% Similarity=0.562 Sum_probs=79.1
Q ss_pred CCcccCCceeccCceEEEEEEeC------CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
.+|...+.||+|+||.||++... ++..+|+|.+........+.|.+|++++.+++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 45777899999999999999742 245689999976655556689999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 004842 698 VYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~ 714 (728)
||||+++|+|.++++..
T Consensus 85 v~e~~~~~~L~~~i~~~ 101 (288)
T cd05093 85 VFEYMKHGDLNKFLRAH 101 (288)
T ss_pred EEEcCCCCCHHHHHHHc
Confidence 99999999999999754
No 155
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=98.98 E-value=1.3e-09 Score=112.54 Aligned_cols=92 Identities=29% Similarity=0.557 Sum_probs=78.5
Q ss_pred CCcccCCceeccCceEEEEEEeCC-C---CEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD-G---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g---~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
++|+..+.||+|+||.||+|..+. + ..+|+|.++... ....++|.+|++++++++|+||+++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 467778999999999999998642 3 379999987543 23346799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcCC
Q 004842 699 YEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~ 715 (728)
|||+++|+|.++++...
T Consensus 85 ~e~~~~~~L~~~~~~~~ 101 (268)
T cd05063 85 TEYMENGALDKYLRDHD 101 (268)
T ss_pred EEcCCCCCHHHHHHhcC
Confidence 99999999999997643
No 156
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.98 E-value=7.4e-11 Score=121.78 Aligned_cols=208 Identities=22% Similarity=0.259 Sum_probs=156.6
Q ss_pred cCCCCCcEEeccCCcCCCcCC-ccCCCCCCCCEEEeeccCCCCCCc--HhhhccCCCCEEEccCccccccccccc-CCCC
Q 004842 127 GNIKSLELLLLNGNELTGSLP-EELGYLPKLDRIQIDQNYISGSLP--KSFANLNKTRHFHMNNNSISGQIPPEL-SRLP 202 (728)
Q Consensus 127 ~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~ 202 (728)
.++.+|+...|.+..+..... +....+++++.|||+.|-+....+ .....|++|+.|+|+.|.+........ ..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 568899999999988873221 356789999999999998875433 345689999999999999874443332 3578
Q ss_pred CCcEEECcCCCCCCC-CCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEccCCcCccCC--CCCCCCCCcCEE
Q 004842 203 SLVHMLLDNNNLTGY-LPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM--PDLSRIPNLGYL 279 (728)
Q Consensus 203 ~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~--~~l~~l~~L~~L 279 (728)
.|+.|.|+.|.++.. +...+..+|+|+.|+|..|.... .-......+..|++|+|++|++-... +..+.++.|..|
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~-~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIIL-IKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccc-eecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 999999999999842 22334568999999999996322 22334566788999999999998765 467889999999
Q ss_pred EccCCCCccc-CCCC------CccCCccEEEccCCCCCCc-CchhccCCccCceeecccccCcc
Q 004842 280 DLSSNQLNGS-IPPG------RLSLNITTIKLSNNKLTGT-IPSNFSGLPRLQRLFIANNSLSG 335 (728)
Q Consensus 280 ~Ls~N~l~~~-ip~~------~~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~ 335 (728)
+++.+.+... +|+. ...++|+.|+++.|++..- .-..+..+++|+.|.+..|.|+.
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 9999998732 2332 1127899999999999621 12345667889999999999974
No 157
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.98 E-value=1.6e-09 Score=113.39 Aligned_cols=92 Identities=24% Similarity=0.394 Sum_probs=77.2
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
++|...+.||+|+||.||+|... ++..||+|.++.... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 45777899999999999999854 588999999865322 2334688999999999999999999999988899999999
Q ss_pred CCCCCHHHHHhcCCC
Q 004842 702 MSNGTLRDQLSGIFS 716 (728)
Q Consensus 702 ~~~GsL~~~L~~~~~ 716 (728)
++ |+|.+++.....
T Consensus 85 ~~-~~l~~~l~~~~~ 98 (288)
T cd07871 85 LD-SDLKQYLDNCGN 98 (288)
T ss_pred CC-cCHHHHHHhcCC
Confidence 98 599999976543
No 158
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.97 E-value=1.5e-09 Score=113.75 Aligned_cols=91 Identities=24% Similarity=0.386 Sum_probs=78.6
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|+..+.||+|+||.||++... +++.||+|.+..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 5677889999999999999864 588999999865322 234568999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
|+++|+|.++++...
T Consensus 82 ~~~~~~L~~~~~~~~ 96 (290)
T cd05580 82 YVPGGELFSHLRKSG 96 (290)
T ss_pred cCCCCCHHHHHHHcC
Confidence 999999999997654
No 159
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=98.97 E-value=1.6e-09 Score=111.10 Aligned_cols=91 Identities=35% Similarity=0.623 Sum_probs=79.4
Q ss_pred CCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
.+|+..+.||+|+||.||++...++..+|+|.+..... ...+|.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 35666789999999999999987788999999875432 34579999999999999999999999998899999999999
Q ss_pred CCCHHHHHhcCC
Q 004842 704 NGTLRDQLSGIF 715 (728)
Q Consensus 704 ~GsL~~~L~~~~ 715 (728)
+|+|.++++...
T Consensus 83 ~~~L~~~~~~~~ 94 (256)
T cd05112 83 HGCLSDYLRAQR 94 (256)
T ss_pred CCcHHHHHHhCc
Confidence 999999998654
No 160
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=98.97 E-value=1.2e-09 Score=113.58 Aligned_cols=93 Identities=29% Similarity=0.562 Sum_probs=78.7
Q ss_pred hcCCcccCCceeccCceEEEEEEeC------CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCe
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 694 (728)
.+++|+..+.||+|+||.||+|... .+..||||++.... .....+|.+|+.+++.++|+||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4566888899999999999998753 24679999986533 2334579999999999999999999999998899
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 004842 695 QMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~ 714 (728)
.++||||+++|+|.++++..
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~ 103 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSL 103 (277)
T ss_pred eEEEEecCCCCCHHHHHHHc
Confidence 99999999999999999753
No 161
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=98.97 E-value=7.6e-10 Score=113.79 Aligned_cols=101 Identities=27% Similarity=0.315 Sum_probs=82.6
Q ss_pred cccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChhcH---HHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~---~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
|...+.||+|.-|+||.+++++ +..+|+|++.+.....+ .....|-+||+.++||.++.|++.+..++..++||||
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~mey 158 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEY 158 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEec
Confidence 4445789999999999999865 57899999976543322 3467788999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCC-Ccccccccccc
Q 004842 702 MSNGTLRDQLSGIF-SVIRHSGICFF 726 (728)
Q Consensus 702 ~~~GsL~~~L~~~~-~~~~~~~~~~~ 726 (728)
|+||||+..++.+. ....+..++||
T Consensus 159 CpGGdL~~LrqkQp~~~fse~~aRFY 184 (459)
T KOG0610|consen 159 CPGGDLHSLRQKQPGKRFSESAARFY 184 (459)
T ss_pred CCCccHHHHHhhCCCCccchhhHHHH
Confidence 99999999998754 34555555554
No 162
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=98.97 E-value=1.7e-09 Score=115.04 Aligned_cols=86 Identities=22% Similarity=0.278 Sum_probs=72.6
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+.||+|+||.||++... +++.||||.++... ....+.+.+|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999865 47899999997532 12234678899999888 799999999999999999999999999
Q ss_pred CCHHHHHhcCC
Q 004842 705 GTLRDQLSGIF 715 (728)
Q Consensus 705 GsL~~~L~~~~ 715 (728)
|+|.+++....
T Consensus 81 ~~L~~~~~~~~ 91 (318)
T cd05570 81 GDLMFHIQRSG 91 (318)
T ss_pred CCHHHHHHHcC
Confidence 99999998654
No 163
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.97 E-value=2.7e-10 Score=103.81 Aligned_cols=92 Identities=27% Similarity=0.453 Sum_probs=75.8
Q ss_pred cccCCceeccCceEEEEEE-eCCCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 626 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
|...++||+|.||+||||. ...++.||+|+++-. +.+-...-.+|+.+++.++|+|||++++....+...-+|+|||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 4556789999999999998 455889999998643 3333457889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCcc
Q 004842 703 SNGTLRDQLSGIFSVI 718 (728)
Q Consensus 703 ~~GsL~~~L~~~~~~~ 718 (728)
.. +|.+|...-.+..
T Consensus 84 dq-dlkkyfdslng~~ 98 (292)
T KOG0662|consen 84 DQ-DLKKYFDSLNGDL 98 (292)
T ss_pred hH-HHHHHHHhcCCcC
Confidence 86 7888877654433
No 164
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.96 E-value=1.4e-09 Score=114.06 Aligned_cols=91 Identities=25% Similarity=0.405 Sum_probs=79.4
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
.+|...+.||+|+||.||++.. .++..||+|.+........+.+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 4567778999999999999984 467899999986554444567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.+++...
T Consensus 99 ~~~~L~~~~~~~ 110 (293)
T cd06647 99 AGGSLTDVVTET 110 (293)
T ss_pred CCCcHHHHHhhc
Confidence 999999999764
No 165
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.96 E-value=7.4e-11 Score=129.75 Aligned_cols=249 Identities=27% Similarity=0.307 Sum_probs=142.4
Q ss_pred CCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEE
Q 004842 104 RLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (728)
Q Consensus 104 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 183 (728)
.+..++.+++..|.+.. +-..+..+++|+.|++..|.|... ...+..+++|++|+|++|.|+.+.+ +..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccccc--hhhccchhhh
Confidence 44555555566666652 222355566666666666666632 2225566667777777776665432 4455557777
Q ss_pred EccCcccccccccccCCCCCCcEEECcCCCCCCCCC-cCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEccCCc
Q 004842 184 HMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCS 262 (728)
Q Consensus 184 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~ 262 (728)
++++|.+... ..+..++.|+.+++++|++...-+ . ...+.+++.+++.+|.+.. ...+..+..+..+++..|.
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~---i~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE---IEGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc---ccchHHHHHHHHhhccccc
Confidence 7777776532 244456777777777777764433 2 4566777777777777642 3334445555555777777
Q ss_pred CccCCCCCCCCC--CcCEEEccCCCCcccCCCC-CccCCccEEEccCCCCCCcCchhccCCccCceeecccccCcccCCc
Q 004842 263 LQGPMPDLSRIP--NLGYLDLSSNQLNGSIPPG-RLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPS 339 (728)
Q Consensus 263 l~~~~~~l~~l~--~L~~L~Ls~N~l~~~ip~~-~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~ 339 (728)
++...+ +..+. .|+.+++++|.+. .++.. ....++..|++.+|++... ..+...+.+..+.+..|.+... ..
T Consensus 220 i~~~~~-l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~ 294 (414)
T KOG0531|consen 220 ISKLEG-LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALS-EA 294 (414)
T ss_pred ceeccC-cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcch-hh
Confidence 664332 11222 3777777777776 33211 1225777778888877644 2344556667777777776532 11
Q ss_pred chhhhccCCCCCCcEEECcCCcCCCcCC
Q 004842 340 SIWQSRTLNATETFILDFQNNNLTNISG 367 (728)
Q Consensus 340 ~~~~~~~l~~~~L~~L~l~~N~l~~~~~ 367 (728)
....-.....+++..+.+..|.+....+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 295 ISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred hhccccccccccccccccccCccccccc
Confidence 1100001145667777777777776543
No 166
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=98.96 E-value=8e-10 Score=114.90 Aligned_cols=89 Identities=26% Similarity=0.378 Sum_probs=76.0
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
|+..+.||+|+||.||+|... ++..||+|.+.... ....+++.+|++++++++|+||+++++++...+..++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 445577999999999999854 57889999986433 2334579999999999999999999999999999999999999
Q ss_pred CCCHHHHHhcC
Q 004842 704 NGTLRDQLSGI 714 (728)
Q Consensus 704 ~GsL~~~L~~~ 714 (728)
+|+|.+++...
T Consensus 86 ~~~L~~~~~~~ 96 (277)
T cd06642 86 GGSALDLLKPG 96 (277)
T ss_pred CCcHHHHhhcC
Confidence 99999998754
No 167
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=98.96 E-value=2.4e-09 Score=124.86 Aligned_cols=90 Identities=26% Similarity=0.422 Sum_probs=78.3
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
.+|...++||+|+||.||+|... .|+.||||+++.... ...++|.+|++++++++|||||++++++...+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 35777899999999999999854 588999999975322 22457999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 004842 700 EFMSNGTLRDQLSG 713 (728)
Q Consensus 700 Ey~~~GsL~~~L~~ 713 (728)
||+++|+|.+++..
T Consensus 82 EY~eGGSL~~lL~s 95 (932)
T PRK13184 82 PYIEGYTLKSLLKS 95 (932)
T ss_pred EcCCCCCHHHHHHH
Confidence 99999999999974
No 168
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=98.96 E-value=1.3e-09 Score=116.14 Aligned_cols=89 Identities=22% Similarity=0.374 Sum_probs=71.8
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHH---hcCCCCcccceeEEEEeCCeEEEE
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFL---SRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l---~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
|...+.||+|+||.||+|... +|+.||||+++... ....+.+.+|++++ ++++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 345678999999999999864 58899999997532 11234566666554 577899999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 004842 699 YEFMSNGTLRDQLSGI 714 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~ 714 (728)
|||+++|+|..+++..
T Consensus 81 ~E~~~~~~L~~~~~~~ 96 (324)
T cd05589 81 MEYAAGGDLMMHIHTD 96 (324)
T ss_pred EcCCCCCcHHHHhhcC
Confidence 9999999999998764
No 169
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=98.96 E-value=2.3e-09 Score=110.81 Aligned_cols=84 Identities=32% Similarity=0.456 Sum_probs=71.5
Q ss_pred ceeccCceEEEEEEeCC---CCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCC
Q 004842 631 QIGQGGYGKVYKGILPD---GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (728)
Q Consensus 631 ~iG~G~fg~Vy~~~~~~---g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~Gs 706 (728)
.||+|+||.||+|+..+ ...+|+|.+.... ....++|.+|+++++.++|+||++++|+|...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 3468899876443 2334578999999999999999999999999999999999999999
Q ss_pred HHHHHhcC
Q 004842 707 LRDQLSGI 714 (728)
Q Consensus 707 L~~~L~~~ 714 (728)
|.+++...
T Consensus 82 L~~~l~~~ 89 (269)
T cd05042 82 LKNYLRSN 89 (269)
T ss_pred HHHHHHhc
Confidence 99999764
No 170
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=98.96 E-value=1.2e-09 Score=117.54 Aligned_cols=91 Identities=29% Similarity=0.555 Sum_probs=75.6
Q ss_pred CCcccCCceeccCceEEEEEEe------CCCCEEEEEEcccCCh-hcHHHHHHHHHHHhcC-CCCcccceeEEEEeC-Ce
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE-GE 694 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~-~~ 694 (728)
++|...+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+.++.++ +|+|||+++++|... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 4577889999999999999973 3467899999975432 2345688999999999 789999999988654 46
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 004842 695 QMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~ 714 (728)
.++||||+++|+|.++++..
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~ 106 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSK 106 (343)
T ss_pred eEEEEeccCCCcHHHHHHhc
Confidence 78999999999999999864
No 171
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=98.96 E-value=1.9e-09 Score=114.84 Aligned_cols=86 Identities=27% Similarity=0.377 Sum_probs=70.2
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHH-HHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
++||+|+||.||+|+.. +|+.||+|.+..... ...+++.+|.. +++.++|||||++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999964 588999999864321 22334566654 57889999999999999999999999999999
Q ss_pred CCHHHHHhcCC
Q 004842 705 GTLRDQLSGIF 715 (728)
Q Consensus 705 GsL~~~L~~~~ 715 (728)
|+|.+++....
T Consensus 81 ~~L~~~l~~~~ 91 (321)
T cd05603 81 GELFFHLQRER 91 (321)
T ss_pred CCHHHHHHHcC
Confidence 99999987654
No 172
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=98.96 E-value=1.9e-09 Score=114.52 Aligned_cols=86 Identities=20% Similarity=0.269 Sum_probs=70.0
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhc-CCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
++||+|+||.||+|... +++.||||.++... ....+.+..|.+++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999964 47899999987532 1223456667777765 4899999999999999999999999999
Q ss_pred CCHHHHHhcCC
Q 004842 705 GTLRDQLSGIF 715 (728)
Q Consensus 705 GsL~~~L~~~~ 715 (728)
|+|.+++....
T Consensus 81 g~L~~~~~~~~ 91 (316)
T cd05592 81 GDLMFHIQSSG 91 (316)
T ss_pred CcHHHHHHHcC
Confidence 99999997654
No 173
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=98.96 E-value=1.9e-09 Score=112.68 Aligned_cols=92 Identities=32% Similarity=0.552 Sum_probs=79.3
Q ss_pred cCCcccCCceeccCceEEEEEEeC------CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 695 (728)
.++|...+.||+|+||.||++..+ ++..||+|.+.... ....++|.+|+.++++++||||++++++|...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 456888899999999999999853 35789999987543 23346799999999999999999999999988899
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 004842 696 MLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~ 714 (728)
++||||+++|+|.++++..
T Consensus 84 ~lv~e~~~~~~L~~~l~~~ 102 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHR 102 (288)
T ss_pred EEEEecCCCCCHHHHHHHc
Confidence 9999999999999999853
No 174
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.96 E-value=2.2e-09 Score=120.66 Aligned_cols=88 Identities=17% Similarity=0.209 Sum_probs=76.3
Q ss_pred cccCCceeccCceEEEEEEeC-C-CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-D-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
|...+.||+|+||.||+|... + +..||+|.+..........+.+|+.+++.++|||||++++++...+..++||||++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 777889999999999999743 3 57889998765544445568889999999999999999999999999999999999
Q ss_pred CCCHHHHHhc
Q 004842 704 NGTLRDQLSG 713 (728)
Q Consensus 704 ~GsL~~~L~~ 713 (728)
+|+|.++|+.
T Consensus 149 gg~L~~~l~~ 158 (478)
T PTZ00267 149 GGDLNKQIKQ 158 (478)
T ss_pred CCCHHHHHHH
Confidence 9999998864
No 175
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=98.95 E-value=2.7e-09 Score=113.99 Aligned_cols=86 Identities=23% Similarity=0.264 Sum_probs=72.1
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
++||+|+||.||++... +++.||+|.++... ....+.+.+|+.++.++ +|||||++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999864 57899999997532 22234577898888776 899999999999999999999999999
Q ss_pred CCHHHHHhcCC
Q 004842 705 GTLRDQLSGIF 715 (728)
Q Consensus 705 GsL~~~L~~~~ 715 (728)
|+|.+++....
T Consensus 81 ~~L~~~~~~~~ 91 (329)
T cd05618 81 GDLMFHMQRQR 91 (329)
T ss_pred CCHHHHHHHcC
Confidence 99999987654
No 176
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.95 E-value=2.5e-09 Score=113.91 Aligned_cols=87 Identities=28% Similarity=0.380 Sum_probs=70.5
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHH-HHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
++||+|+||+||+|... +|+.||||++..... ...+++.+|.. +++.++|||||++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46899999999999964 589999999864321 12234555554 56789999999999999999999999999999
Q ss_pred CCHHHHHhcCCC
Q 004842 705 GTLRDQLSGIFS 716 (728)
Q Consensus 705 GsL~~~L~~~~~ 716 (728)
|+|.+++.....
T Consensus 81 g~L~~~l~~~~~ 92 (323)
T cd05575 81 GELFFHLQRERS 92 (323)
T ss_pred CCHHHHHHhcCC
Confidence 999999986543
No 177
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=98.95 E-value=3.6e-09 Score=109.22 Aligned_cols=89 Identities=27% Similarity=0.468 Sum_probs=77.1
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccC---ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
++|...+.||+|+||.||+|... +++.||||.+... .....+.|.+|++++++++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 46778899999999999999854 6899999987542 2233457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHh
Q 004842 700 EFMSNGTLRDQLS 712 (728)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (728)
||+++|+|.+++.
T Consensus 82 e~~~~~~L~~~~~ 94 (267)
T cd08228 82 ELADAGDLSQMIK 94 (267)
T ss_pred EecCCCcHHHHHH
Confidence 9999999999885
No 178
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.95 E-value=2.4e-09 Score=111.50 Aligned_cols=91 Identities=31% Similarity=0.499 Sum_probs=77.3
Q ss_pred CcccCCceeccCceEEEEEEeC-----CCCEEEEEEcccCChh-cHHHHHHHHHHHhcCCCCcccceeEEEEe--CCeEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQM 696 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~ 696 (728)
.|...+.||+|+||.||++.+. .+..||||.+...... ..++|.+|++++++++|+||+++++++.. ....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4556688999999999999864 3678999999765432 45689999999999999999999999877 55789
Q ss_pred EEEecCCCCCHHHHHhcCC
Q 004842 697 LVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~ 715 (728)
+||||+++|+|.++++...
T Consensus 85 lv~e~~~~~~l~~~l~~~~ 103 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHR 103 (284)
T ss_pred EEEecCCCCCHHHHHHhCc
Confidence 9999999999999998754
No 179
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.95 E-value=1.1e-10 Score=128.49 Aligned_cols=263 Identities=22% Similarity=0.236 Sum_probs=182.5
Q ss_pred CCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEc
Q 004842 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHM 185 (728)
Q Consensus 106 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 185 (728)
+.++.++...+.+...--. ...+..++.+++..|.+.. +-..+..+++|+.|++.+|.|..+. ..+..+.+|++|++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~l 125 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDL 125 (414)
T ss_pred chhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcc-cchhhhhcchheec
Confidence 3445555555544321111 1456778888888888873 4455788899999999999998543 33778899999999
Q ss_pred cCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCCCccc-ccCCCCCcEEEccCCcCc
Q 004842 186 NNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPAS-YSNMSKLLKLSLRNCSLQ 264 (728)
Q Consensus 186 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~-~~~l~~L~~L~L~~n~l~ 264 (728)
++|.|+... .+..++.|+.|++++|.++.. ..+..++.|+.+++++|++.. +... ...+.+++.+++.+|.+.
T Consensus 126 s~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~--ie~~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 126 SFNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVD--IENDELSELISLEELDLGGNSIR 199 (414)
T ss_pred ccccccccc--chhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhh--hhhhhhhhccchHHHhccCCchh
Confidence 999998654 466777899999999999843 346668999999999999974 3332 577889999999999887
Q ss_pred cCCCCCCCCCCcCEEEccCCCCcccCCCCCccCC--ccEEEccCCCCCCcCchhccCCccCceeecccccCcccCCcchh
Q 004842 265 GPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLN--ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (728)
Q Consensus 265 ~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~ 342 (728)
... .+..+..+..+++..|.++. +-....... |+.+++++|.+.. .+..+..+..+..|++.+|++...-...
T Consensus 200 ~i~-~~~~~~~l~~~~l~~n~i~~-~~~l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~~~~~-- 274 (414)
T KOG0531|consen 200 EIE-GLDLLKKLVLLSLLDNKISK-LEGLNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNLEGLE-- 274 (414)
T ss_pred ccc-chHHHHHHHHhhccccccee-ccCcccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccccccc--
Confidence 433 33344455566888898873 322212222 8999999999983 3366778899999999999987422111
Q ss_pred hhccCCCCCCcEEECcCCcCCCcC---C---CCCCCCceEEEcCCCcCCCC
Q 004842 343 QSRTLNATETFILDFQNNNLTNIS---G---SFNIPPNVTVRLRGNPFCLN 387 (728)
Q Consensus 343 ~~~~l~~~~L~~L~l~~N~l~~~~---~---~~~~~~l~~l~l~~N~~~~~ 387 (728)
....+..+....|.+.... . ....+.+..+.+.+|+....
T Consensus 275 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (414)
T KOG0531|consen 275 -----RLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKI 320 (414)
T ss_pred -----ccchHHHhccCcchhcchhhhhccccccccccccccccccCccccc
Confidence 3345566677777776431 1 22356677788888876543
No 180
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=98.95 E-value=3.3e-09 Score=109.13 Aligned_cols=90 Identities=29% Similarity=0.420 Sum_probs=80.0
Q ss_pred CcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
+|...+.||+|++|.||++...+ ++.||||++..... ...++|.+|++.+.+++|+||+++++++...+..++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 57778999999999999999754 89999999876543 34568999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.+++...
T Consensus 82 ~~~~L~~~l~~~ 93 (264)
T cd06623 82 DGGSLADLLKKV 93 (264)
T ss_pred CCCcHHHHHHHc
Confidence 999999999864
No 181
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=98.94 E-value=3e-09 Score=108.92 Aligned_cols=90 Identities=24% Similarity=0.408 Sum_probs=78.4
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|+..+.||+|+||.||+|... ++..||+|.+... .....+++.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 3666789999999999999864 5889999998643 233456799999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
+++|+|.++++..
T Consensus 81 ~~~~~L~~~l~~~ 93 (256)
T cd08529 81 AENGDLHKLLKMQ 93 (256)
T ss_pred CCCCcHHHHHHHh
Confidence 9999999999864
No 182
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=98.94 E-value=2.1e-09 Score=111.82 Aligned_cols=92 Identities=30% Similarity=0.536 Sum_probs=79.0
Q ss_pred cCCcccCCceeccCceEEEEEEeCC------CCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 695 (728)
+++|...+.||+|+||.||+|...+ +..||+|.+.... ...+.+|.+|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4567788999999999999998643 5679999886543 33446799999999999999999999999988899
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 004842 696 MLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~ 714 (728)
++||||+++|+|.++++..
T Consensus 85 ~lv~e~~~g~~L~~~i~~~ 103 (277)
T cd05036 85 FILLELMAGGDLKSFLREN 103 (277)
T ss_pred EEEEecCCCCCHHHHHHHh
Confidence 9999999999999999764
No 183
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.94 E-value=1.8e-10 Score=122.43 Aligned_cols=88 Identities=31% Similarity=0.485 Sum_probs=73.6
Q ss_pred cccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhc---HHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 626 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
|...+.||.|+||.||-+. ..+...||||++.-+..+. +.+...|++.+.+++|||+|.+.|||..+.+.||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 4445679999999999998 4457899999997654443 45789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
|- |+-.|.|.-.
T Consensus 108 Cl-GSAsDlleVh 119 (948)
T KOG0577|consen 108 CL-GSASDLLEVH 119 (948)
T ss_pred Hh-ccHHHHHHHH
Confidence 97 4777777533
No 184
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=98.94 E-value=2e-09 Score=113.07 Aligned_cols=91 Identities=29% Similarity=0.500 Sum_probs=76.4
Q ss_pred CCcccCCceeccCceEEEEEEeCC---------------CCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD---------------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVG 687 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~---------------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g 687 (728)
.+|...+.||+|+||.||++...+ ...||||.++... ......|.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 457778899999999999987532 2358999997542 233457999999999999999999999
Q ss_pred EEEeCCeEEEEEecCCCCCHHHHHhcC
Q 004842 688 YCDEEGEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 688 ~~~~~~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
++...+..++||||+++|+|.++++..
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~ 111 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQR 111 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhc
Confidence 999999999999999999999999753
No 185
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=98.94 E-value=3.5e-09 Score=109.15 Aligned_cols=90 Identities=32% Similarity=0.509 Sum_probs=78.6
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
++|+..+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 46788899999999999999975 68999999886422 223457999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 004842 700 EFMSNGTLRDQLSG 713 (728)
Q Consensus 700 Ey~~~GsL~~~L~~ 713 (728)
||+++|+|.+++..
T Consensus 82 e~~~~~~L~~~l~~ 95 (267)
T cd08224 82 ELADAGDLSRMIKH 95 (267)
T ss_pred ecCCCCCHHHHHHH
Confidence 99999999999864
No 186
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=98.94 E-value=2.4e-09 Score=109.68 Aligned_cols=91 Identities=26% Similarity=0.422 Sum_probs=80.3
Q ss_pred CCcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
++|+..+.||+|+||.||+|...+ +..||+|.+..... .++|.+|++++++++|+||++++|++...+..++|+||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 567788999999999999999765 78999999865432 568999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCC
Q 004842 703 SNGTLRDQLSGIFS 716 (728)
Q Consensus 703 ~~GsL~~~L~~~~~ 716 (728)
++++|.+++.....
T Consensus 81 ~~~~L~~~l~~~~~ 94 (256)
T cd06612 81 GAGSVSDIMKITNK 94 (256)
T ss_pred CCCcHHHHHHhCcc
Confidence 99999999976443
No 187
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=98.94 E-value=2.2e-09 Score=110.58 Aligned_cols=90 Identities=34% Similarity=0.598 Sum_probs=78.4
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
.+|...+.||+|+||.||+|... .++.||+|.+.... ...++|.+|++++.+++|+||++++++|..++..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 34667789999999999999965 47899999987543 23467999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.+++...
T Consensus 85 ~~~~L~~~~~~~ 96 (263)
T cd05052 85 TYGNLLDYLREC 96 (263)
T ss_pred CCCcHHHHHHhC
Confidence 999999999754
No 188
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.94 E-value=2.7e-09 Score=113.65 Aligned_cols=87 Identities=23% Similarity=0.287 Sum_probs=72.5
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
++||+|+||.||+|+.. +++.||||++.... ....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46899999999999865 47899999986532 12234678899998876 899999999999999999999999999
Q ss_pred CCHHHHHhcCCC
Q 004842 705 GTLRDQLSGIFS 716 (728)
Q Consensus 705 GsL~~~L~~~~~ 716 (728)
|+|.+++.....
T Consensus 81 ~~L~~~l~~~~~ 92 (321)
T cd05591 81 GDLMFQIQRSRK 92 (321)
T ss_pred CcHHHHHHHcCC
Confidence 999999976543
No 189
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=98.94 E-value=3.2e-09 Score=111.30 Aligned_cols=91 Identities=24% Similarity=0.448 Sum_probs=79.8
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
+.|+..+.||+|+||.||+|+.. ++..||+|.+........++|.+|+++++.++|+||+++++++..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 45667788999999999999964 48899999997765555678999999999999999999999999899999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.+++...
T Consensus 92 ~~~~l~~~~~~~ 103 (292)
T cd06644 92 PGGAVDAIMLEL 103 (292)
T ss_pred CCCcHHHHHHhh
Confidence 999999988653
No 190
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.94 E-value=2.8e-09 Score=113.98 Aligned_cols=92 Identities=25% Similarity=0.314 Sum_probs=76.2
Q ss_pred CcccCCceeccCceEEEEEEe----CCCCEEEEEEcccCC----hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeE
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 695 (728)
+|...+.||+|+||.||+++. .+++.||+|.+.... ....+.+.+|+.++.++ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 366778999999999999874 357899999986432 12234688999999999 589999999999989999
Q ss_pred EEEEecCCCCCHHHHHhcCCC
Q 004842 696 MLVYEFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~~~ 716 (728)
++||||+++|+|.+++..+..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~ 101 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDN 101 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCC
Confidence 999999999999999976543
No 191
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.94 E-value=3e-09 Score=110.88 Aligned_cols=88 Identities=25% Similarity=0.439 Sum_probs=77.0
Q ss_pred ccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCC
Q 004842 627 NSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (728)
Q Consensus 627 ~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~G 705 (728)
+..+.||+|+||.||+|.... +..+|+|.+........+.|.+|+++++.++|+||+++++++..++..++||||+++|
T Consensus 8 ~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~ 87 (282)
T cd06643 8 EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG 87 (282)
T ss_pred HHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCC
Confidence 445779999999999999654 7788999987655555667999999999999999999999999999999999999999
Q ss_pred CHHHHHhcC
Q 004842 706 TLRDQLSGI 714 (728)
Q Consensus 706 sL~~~L~~~ 714 (728)
+|.++++..
T Consensus 88 ~l~~~~~~~ 96 (282)
T cd06643 88 AVDAVMLEL 96 (282)
T ss_pred cHHHHHHhc
Confidence 999998753
No 192
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=98.93 E-value=7.2e-10 Score=117.56 Aligned_cols=96 Identities=25% Similarity=0.305 Sum_probs=80.6
Q ss_pred hcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhc---HHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEE
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 696 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 696 (728)
..++|...++||+|+|.+||+|.- +.++.||||++.+..... .+-..+|-++|.++ .||.||+|+-.+.++..+|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 345688889999999999999984 458999999997643222 23467888899999 9999999999999999999
Q ss_pred EEEecCCCCCHHHHHhcCCCc
Q 004842 697 LVYEFMSNGTLRDQLSGIFSV 717 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~~~ 717 (728)
.|+||++||+|.++|++-+..
T Consensus 151 FvLe~A~nGdll~~i~K~Gsf 171 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKYGSF 171 (604)
T ss_pred EEEEecCCCcHHHHHHHhCcc
Confidence 999999999999999976443
No 193
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=98.93 E-value=2.9e-09 Score=109.46 Aligned_cols=91 Identities=26% Similarity=0.392 Sum_probs=80.8
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
++|...+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||++++|++...+..++||||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 56778889999999999999864 57889999997655445678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.+++...
T Consensus 83 ~~~~l~~~~~~~ 94 (262)
T cd06613 83 GGGSLQDIYQVT 94 (262)
T ss_pred CCCcHHHHHHhh
Confidence 999999999765
No 194
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=98.93 E-value=3e-09 Score=109.38 Aligned_cols=89 Identities=29% Similarity=0.529 Sum_probs=77.3
Q ss_pred CCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
++|...++||+|+||.||+|..++++.||+|.+..... ..++|.+|+.++++++|+||+++++++ ..+..++||||++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCC
Confidence 45677789999999999999988899999999976443 346899999999999999999999986 4567899999999
Q ss_pred CCCHHHHHhcC
Q 004842 704 NGTLRDQLSGI 714 (728)
Q Consensus 704 ~GsL~~~L~~~ 714 (728)
+|+|.++++..
T Consensus 84 ~~~L~~~~~~~ 94 (260)
T cd05067 84 NGSLVDFLKTP 94 (260)
T ss_pred CCCHHHHHHhc
Confidence 99999999753
No 195
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=98.93 E-value=3.2e-09 Score=112.76 Aligned_cols=85 Identities=21% Similarity=0.319 Sum_probs=70.9
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+.||+|+||.||+|... +++.||||.++... ....+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36899999999999965 47899999997532 12234567788888764 999999999999999999999999999
Q ss_pred CCHHHHHhcC
Q 004842 705 GTLRDQLSGI 714 (728)
Q Consensus 705 GsL~~~L~~~ 714 (728)
|+|.+++...
T Consensus 81 g~L~~~l~~~ 90 (316)
T cd05619 81 GDLMFHIQSC 90 (316)
T ss_pred CcHHHHHHHc
Confidence 9999999764
No 196
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.93 E-value=2.1e-09 Score=110.28 Aligned_cols=84 Identities=29% Similarity=0.489 Sum_probs=71.1
Q ss_pred CceeccCceEEEEEEeCCCC-----------EEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 630 TQIGQGGYGKVYKGILPDGT-----------VVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~g~-----------~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
+.||+|+||.||+|...+.. .||+|.+...... .+.|.+|+.++++++|+||++++|++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 36899999999999975432 5788887654333 5689999999999999999999999988 778999
Q ss_pred EecCCCCCHHHHHhcCC
Q 004842 699 YEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~ 715 (728)
|||+++|+|.++++...
T Consensus 79 ~e~~~~~~L~~~l~~~~ 95 (259)
T cd05037 79 EEYVKFGPLDVFLHREK 95 (259)
T ss_pred EEcCCCCcHHHHHHhhc
Confidence 99999999999998654
No 197
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.93 E-value=1.9e-09 Score=112.66 Aligned_cols=90 Identities=23% Similarity=0.400 Sum_probs=78.1
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccC-ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
+|+..+.||+|+||.||++... .|..||+|.+... .....++|.+|++++.+++|+||+++++++...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 4667789999999999999975 5899999988653 2233457999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.++++..
T Consensus 82 ~~~~l~~~~~~~ 93 (286)
T cd06622 82 DAGSLDKLYAGG 93 (286)
T ss_pred CCCCHHHHHHhc
Confidence 999999999863
No 198
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=98.93 E-value=2.3e-09 Score=112.07 Aligned_cols=88 Identities=25% Similarity=0.406 Sum_probs=74.6
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|...+.||+|+||.||+|..+ +++.||||++..... ...+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 5777889999999999999975 478999999865322 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHh
Q 004842 702 MSNGTLRDQLS 712 (728)
Q Consensus 702 ~~~GsL~~~L~ 712 (728)
+++|.+..+..
T Consensus 82 ~~~~~l~~~~~ 92 (287)
T cd07848 82 VEKNMLELLEE 92 (287)
T ss_pred CCCCHHHHHHh
Confidence 99987766544
No 199
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=98.93 E-value=3.6e-09 Score=108.87 Aligned_cols=92 Identities=27% Similarity=0.453 Sum_probs=78.8
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh-----hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-----~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
++|...+.||+|++|.||+|.. .+++.||+|.+..... ...+.+.+|++++++++||||++++|++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688889999999999999985 4589999999864321 123468999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcCC
Q 004842 698 VYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~~ 715 (728)
||||+++|+|.+++....
T Consensus 82 v~e~~~~~~l~~~~~~~~ 99 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG 99 (263)
T ss_pred EEEECCCCcHHHHHHHhC
Confidence 999999999999997643
No 200
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=98.93 E-value=3.1e-09 Score=113.37 Aligned_cols=87 Identities=29% Similarity=0.345 Sum_probs=70.7
Q ss_pred CceeccCceEEEEEEe-CCCCEEEEEEcccCC---hhcHHHHHHHHH-HHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+.||+|+||+||+|.. .+|+.||||++.... ....+++..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4689999999999985 468999999986431 122345666665 46779999999999999999999999999999
Q ss_pred CCHHHHHhcCCC
Q 004842 705 GTLRDQLSGIFS 716 (728)
Q Consensus 705 GsL~~~L~~~~~ 716 (728)
|+|.+++.....
T Consensus 81 ~~L~~~l~~~~~ 92 (325)
T cd05604 81 GELFFHLQRERS 92 (325)
T ss_pred CCHHHHHHHcCC
Confidence 999999976543
No 201
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=98.93 E-value=1.5e-09 Score=113.31 Aligned_cols=90 Identities=30% Similarity=0.438 Sum_probs=77.1
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|+..+.||+|+||.||+|..+ .++.||+|++..... ...+.+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 5667789999999999999975 488999999864322 2345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
++++.|.++.+..
T Consensus 82 ~~~~~l~~~~~~~ 94 (286)
T cd07846 82 VDHTVLDDLEKYP 94 (286)
T ss_pred CCccHHHHHHhcc
Confidence 9999999887654
No 202
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.93 E-value=2.5e-09 Score=113.79 Aligned_cols=87 Identities=25% Similarity=0.311 Sum_probs=72.7
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
++||+|+||.||+|+.+ +++.||||.+.... ....+.+..|.+++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999864 58899999986532 12335678898888876 699999999999999999999999999
Q ss_pred CCHHHHHhcCCC
Q 004842 705 GTLRDQLSGIFS 716 (728)
Q Consensus 705 GsL~~~L~~~~~ 716 (728)
|+|.+++.....
T Consensus 81 g~L~~~i~~~~~ 92 (320)
T cd05590 81 GDLMFHIQKSRR 92 (320)
T ss_pred chHHHHHHHcCC
Confidence 999999976543
No 203
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=98.93 E-value=3.9e-09 Score=109.98 Aligned_cols=91 Identities=30% Similarity=0.545 Sum_probs=79.2
Q ss_pred CCcccCCceeccCceEEEEEEeC------CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
.++.....||+|+||.||++... ++..+|+|.+........++|.+|+++++.++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 35667789999999999999742 356899999987665556789999999999999999999999998899999
Q ss_pred EEecCCCCCHHHHHhcC
Q 004842 698 VYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~ 714 (728)
||||+++|+|.++++..
T Consensus 85 v~e~~~~~~L~~~i~~~ 101 (280)
T cd05092 85 VFEYMRHGDLNRFLRSH 101 (280)
T ss_pred EEecCCCCCHHHHHHhc
Confidence 99999999999999864
No 204
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.93 E-value=3.4e-10 Score=117.15 Aligned_cols=93 Identities=24% Similarity=0.311 Sum_probs=79.8
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
..|+....||+|.||.||||.. ..++.||+|.+.-.. ....++..+|+.++..++|+||.+++|.+..+..+|++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 3466668899999999999984 458899999997543 33346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCCC
Q 004842 702 MSNGTLRDQLSGIFS 716 (728)
Q Consensus 702 ~~~GsL~~~L~~~~~ 716 (728)
|.+|++.+.|.....
T Consensus 93 ~~gGsv~~lL~~~~~ 107 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNI 107 (467)
T ss_pred hcCcchhhhhccCCC
Confidence 999999999987543
No 205
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.92 E-value=2.6e-09 Score=116.22 Aligned_cols=90 Identities=24% Similarity=0.354 Sum_probs=75.2
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC-----eEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQM 696 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~ 696 (728)
+|+..+.||+|+||.||++.. .+|+.||||++... .....+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 467789999999999999985 46899999998643 2233457899999999999999999999998766 789
Q ss_pred EEEecCCCCCHHHHHhcCC
Q 004842 697 LVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~ 715 (728)
+|+||++ ++|.+++....
T Consensus 81 lv~e~~~-~~l~~~~~~~~ 98 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ 98 (372)
T ss_pred EEeeccc-cCHHHHHhcCC
Confidence 9999997 58988886543
No 206
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=98.92 E-value=4.9e-09 Score=109.12 Aligned_cols=87 Identities=22% Similarity=0.337 Sum_probs=74.9
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccC-ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
+|+..++||+|+||.||+|.. .+++.||+|.+... .....++|.+|++++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 466778999999999999984 46889999998654 2333467999999999999999999999999999999999999
Q ss_pred CCCCHHHHH
Q 004842 703 SNGTLRDQL 711 (728)
Q Consensus 703 ~~GsL~~~L 711 (728)
++|+|..+.
T Consensus 82 ~~~~l~~~~ 90 (279)
T cd06619 82 DGGSLDVYR 90 (279)
T ss_pred CCCChHHhh
Confidence 999997664
No 207
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=98.92 E-value=3.7e-09 Score=111.67 Aligned_cols=91 Identities=21% Similarity=0.298 Sum_probs=78.3
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|...+.||+|+||.||++... .++.||+|.+..... ...+.+.+|+++++.++|+||+++++++..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 5777889999999999999864 478999999875432 223568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
|+++|+|.+++....
T Consensus 82 ~~~g~~L~~~l~~~~ 96 (305)
T cd05609 82 YVEGGDCATLLKNIG 96 (305)
T ss_pred cCCCCcHHHHHHHcC
Confidence 999999999997654
No 208
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=98.92 E-value=9.5e-10 Score=113.07 Aligned_cols=87 Identities=28% Similarity=0.446 Sum_probs=73.3
Q ss_pred CceeccCceEEEEEEeCC--------CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 630 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+.||+|+||.||+|.... ...||+|.+........++|.+|+.+++.++|||||+++|++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 368999999999998532 234888888655444456799999999999999999999999998899999999
Q ss_pred CCCCCHHHHHhcCCC
Q 004842 702 MSNGTLRDQLSGIFS 716 (728)
Q Consensus 702 ~~~GsL~~~L~~~~~ 716 (728)
+++|+|.++++.+..
T Consensus 81 ~~~g~L~~~l~~~~~ 95 (258)
T cd05078 81 VKFGSLDTYLKKNKN 95 (258)
T ss_pred CCCCcHHHHHhcCCC
Confidence 999999999987543
No 209
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.92 E-value=3.2e-09 Score=109.07 Aligned_cols=86 Identities=29% Similarity=0.492 Sum_probs=70.8
Q ss_pred ceeccCceEEEEEEeC---CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCC
Q 004842 631 QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (728)
Q Consensus 631 ~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~Gs 706 (728)
.||+|+||.||+|.+. ++..||||.+..... ...++|.+|+.++++++|+||++++|+|. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999763 355799999976432 23457999999999999999999999985 457899999999999
Q ss_pred HHHHHhcCCCc
Q 004842 707 LRDQLSGIFSV 717 (728)
Q Consensus 707 L~~~L~~~~~~ 717 (728)
|.+++..+...
T Consensus 81 L~~~l~~~~~~ 91 (257)
T cd05115 81 LNKFLSGKKDE 91 (257)
T ss_pred HHHHHHhCCCC
Confidence 99999864433
No 210
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.92 E-value=4e-09 Score=108.51 Aligned_cols=90 Identities=30% Similarity=0.427 Sum_probs=78.9
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChh--cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
|+..+.||+|+||.||+|... +++.||+|.++..... ..+++.+|+.++++++|+||++++|++...+..++|+||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 566789999999999999864 6889999998765432 4567999999999999999999999999899999999999
Q ss_pred CCCCHHHHHhcCC
Q 004842 703 SNGTLRDQLSGIF 715 (728)
Q Consensus 703 ~~GsL~~~L~~~~ 715 (728)
++++|.++++...
T Consensus 82 ~~~~L~~~~~~~~ 94 (264)
T cd06626 82 SGGTLEELLEHGR 94 (264)
T ss_pred CCCcHHHHHhhcC
Confidence 9999999998753
No 211
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=98.92 E-value=3.6e-09 Score=111.63 Aligned_cols=92 Identities=27% Similarity=0.476 Sum_probs=77.9
Q ss_pred cCCcccCCceeccCceEEEEEEe------CCCCEEEEEEcccCCh-hcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCe
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 694 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 694 (728)
.++|...+.||+|+||.||++.. ..+..||||+++.... ...+.|.+|+++++++ +|+||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 34688889999999999999973 1245799999876432 2345799999999999 79999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 004842 695 QMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~ 714 (728)
.++||||+++|+|.++++..
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~ 133 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRK 133 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhC
Confidence 99999999999999999864
No 212
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=98.92 E-value=4e-09 Score=108.81 Aligned_cols=92 Identities=28% Similarity=0.428 Sum_probs=75.6
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC-----hhcHHHHHHHHHHHhcCCCCcccceeEEEEeC--CeE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 695 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 695 (728)
.+|...+.||+|+||.||+|... +|..||||.+.... ....+.+.+|+.++.+++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46778899999999999999864 58899999885321 12235688999999999999999999988653 467
Q ss_pred EEEEecCCCCCHHHHHhcCC
Q 004842 696 MLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~~ 715 (728)
++||||+++|+|.+++....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~ 101 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG 101 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC
Confidence 89999999999999997643
No 213
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.92 E-value=3.4e-09 Score=111.10 Aligned_cols=90 Identities=29% Similarity=0.581 Sum_probs=78.3
Q ss_pred CcccCCceeccCceEEEEEEeC------CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
+|...+.||+|+||.||+|+.. ++..+|+|.+........+.|.+|++++++++|+||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 4666789999999999999742 3456899999776655567899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 004842 699 YEFMSNGTLRDQLSGI 714 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~ 714 (728)
|||+++|+|.++++..
T Consensus 86 ~e~~~~~~L~~~i~~~ 101 (291)
T cd05094 86 FEYMKHGDLNKFLRAH 101 (291)
T ss_pred EecCCCCcHHHHHHhc
Confidence 9999999999999753
No 214
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=98.92 E-value=3.8e-09 Score=107.93 Aligned_cols=85 Identities=34% Similarity=0.592 Sum_probs=75.5
Q ss_pred CceeccCceEEEEEEeCCCCEEEEEEcccCChh-cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCHH
Q 004842 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL~ 708 (728)
++||+|+||.||++...+++.||+|.+...... ..+.|.+|++++++++|+||+++++++...+..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 368999999999999877999999998764433 4467999999999999999999999999999999999999999999
Q ss_pred HHHhcC
Q 004842 709 DQLSGI 714 (728)
Q Consensus 709 ~~L~~~ 714 (728)
++++..
T Consensus 81 ~~l~~~ 86 (251)
T cd05041 81 TFLRKK 86 (251)
T ss_pred HHHHhc
Confidence 999764
No 215
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=98.91 E-value=3.4e-09 Score=123.56 Aligned_cols=92 Identities=22% Similarity=0.276 Sum_probs=79.2
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
++|...+.||+|+||.||+|... +++.||||+++.... ...+.+.+|+.++..++|+|||++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 46777899999999999999965 588999999975432 22356889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcCC
Q 004842 700 EFMSNGTLRDQLSGIF 715 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~ 715 (728)
|||++|+|.++++...
T Consensus 84 Ey~~g~~L~~li~~~~ 99 (669)
T cd05610 84 EYLIGGDVKSLLHIYG 99 (669)
T ss_pred eCCCCCCHHHHHHhcC
Confidence 9999999999997543
No 216
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.91 E-value=3.3e-09 Score=111.46 Aligned_cols=91 Identities=29% Similarity=0.486 Sum_probs=77.2
Q ss_pred CCcccCCceeccCceEEEEEEeC-----------------CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccce
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-----------------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSL 685 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-----------------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l 685 (728)
++|+..+.||+|+||.||++... ++..||+|.+.... .....+|.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 45778899999999999998532 23468999997543 2334679999999999999999999
Q ss_pred eEEEEeCCeEEEEEecCCCCCHHHHHhcC
Q 004842 686 VGYCDEEGEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 686 ~g~~~~~~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
++++...+..++||||+++|+|.+++...
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 113 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRH 113 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhc
Confidence 99999999999999999999999999864
No 217
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.91 E-value=3.7e-09 Score=112.73 Aligned_cols=92 Identities=18% Similarity=0.227 Sum_probs=75.4
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCC-cccceeEEEEeCCeEEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHR-NLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lV~ 699 (728)
+|...+.||+|+||.||+|+.. +++.||||++.... ....+.+..|.+++..++|+ +|+++.+++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4667789999999999999865 47899999987532 22345688999999999765 5888999998889999999
Q ss_pred ecCCCCCHHHHHhcCCC
Q 004842 700 EFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~ 716 (728)
||+++|+|.+++.....
T Consensus 81 E~~~~g~L~~~~~~~~~ 97 (324)
T cd05587 81 EYVNGGDLMYHIQQVGK 97 (324)
T ss_pred cCCCCCcHHHHHHHcCC
Confidence 99999999999976543
No 218
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.91 E-value=1.4e-09 Score=113.49 Aligned_cols=89 Identities=31% Similarity=0.465 Sum_probs=72.6
Q ss_pred hcCCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChh--------------cHHHHHHHHHHHhcCCCCccccee
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQ--------------GEKEFLTEIQFLSRLHHRNLVSLV 686 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~--------------~~~~f~~E~~~l~~l~H~niv~l~ 686 (728)
..++|.....||+|.||.|-.|. ..+++.||||++.+.... ..+...+||.+|++++|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 34678888999999999999998 456899999999653111 124688999999999999999999
Q ss_pred EEEEe--CCeEEEEEecCCCCCHHHH
Q 004842 687 GYCDE--EGEQMLVYEFMSNGTLRDQ 710 (728)
Q Consensus 687 g~~~~--~~~~~lV~Ey~~~GsL~~~ 710 (728)
.+-.+ .+..|||+|||..|.+...
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~ 200 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWC 200 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccC
Confidence 99865 4679999999999987543
No 219
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=98.91 E-value=5.6e-09 Score=108.58 Aligned_cols=90 Identities=24% Similarity=0.358 Sum_probs=77.7
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
.|+..+.||+|+||.||+|... ++..||+|.+.... ......|.+|++++++++|+||+++++++...+..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 3556688999999999999864 57899999986543 233467999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.+++...
T Consensus 85 ~~~~L~~~i~~~ 96 (277)
T cd06640 85 GGGSALDLLRAG 96 (277)
T ss_pred CCCcHHHHHhcC
Confidence 999999999754
No 220
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.91 E-value=9.7e-11 Score=117.91 Aligned_cols=192 Identities=18% Similarity=0.226 Sum_probs=106.5
Q ss_pred hhccCCCCEEEccCccccccccc----ccCCCCCCcEEECcCCCCCCCC-------------CcCCCCCCCCcEEEcccc
Q 004842 174 FANLNKTRHFHMNNNSISGQIPP----ELSRLPSLVHMLLDNNNLTGYL-------------PPELSELPKLLILQLDNN 236 (728)
Q Consensus 174 ~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~-------------~~~l~~l~~L~~L~L~~N 236 (728)
+...++|++|+||+|.|....+. -+.++..|++|+|.+|.+...- ..-...-+.|+++....|
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rN 167 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRN 167 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecc
Confidence 44567899999999998644333 3456788999999999876211 111223345666666666
Q ss_pred cCCCCC---CcccccCCCCCcEEEccCCcCccCCC-----CCCCCCCcCEEEccCCCCcccCCCCCccCCccEEEccCCC
Q 004842 237 NFEGTT---IPASYSNMSKLLKLSLRNCSLQGPMP-----DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNK 308 (728)
Q Consensus 237 ~l~~~~---~p~~~~~l~~L~~L~L~~n~l~~~~~-----~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~ 308 (728)
++.... +...|...+.|+.+.++.|.+...-- .+..+++|+.|||.+|-++..-.
T Consensus 168 rlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs----------------- 230 (382)
T KOG1909|consen 168 RLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGS----------------- 230 (382)
T ss_pred ccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHH-----------------
Confidence 654210 11223444555555555555431110 23444445555554444431100
Q ss_pred CCCcCchhccCCccCceeecccccCcccCCcchhhhccCCCCCCcEEECcCCcCCCcC------CCCCCCCceEEEcCCC
Q 004842 309 LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS------GSFNIPPNVTVRLRGN 382 (728)
Q Consensus 309 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~l~~N~l~~~~------~~~~~~~l~~l~l~~N 382 (728)
..+...+..+++|+.|+++.+.+.......+.....-..+.|++|++.+|.++.-. .--..+.+..|+|++|
T Consensus 231 --~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN 308 (382)
T KOG1909|consen 231 --VALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGN 308 (382)
T ss_pred --HHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcc
Confidence 02334556667777777777777655555544332224577777777777776311 1112566778888888
Q ss_pred cC
Q 004842 383 PF 384 (728)
Q Consensus 383 ~~ 384 (728)
.+
T Consensus 309 ~l 310 (382)
T KOG1909|consen 309 RL 310 (382)
T ss_pred cc
Confidence 87
No 221
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=98.91 E-value=3.1e-09 Score=109.96 Aligned_cols=84 Identities=30% Similarity=0.446 Sum_probs=70.5
Q ss_pred ceeccCceEEEEEEeCCC---CEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCC
Q 004842 631 QIGQGGYGKVYKGILPDG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (728)
Q Consensus 631 ~iG~G~fg~Vy~~~~~~g---~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~Gs 706 (728)
.||+|+||.||+|...++ ..+++|.+.... ....+.|.+|+.+++.++|||||+++|+|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999985443 346677765433 2345689999999999999999999999999899999999999999
Q ss_pred HHHHHhcC
Q 004842 707 LRDQLSGI 714 (728)
Q Consensus 707 L~~~L~~~ 714 (728)
|.++++..
T Consensus 82 L~~~l~~~ 89 (268)
T cd05086 82 LKSYLSQE 89 (268)
T ss_pred HHHHHHhh
Confidence 99999864
No 222
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.91 E-value=3.4e-09 Score=112.90 Aligned_cols=92 Identities=18% Similarity=0.230 Sum_probs=74.9
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCC-CCcccceeEEEEeCCeEEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~ 699 (728)
+|+..+.||+|+||.||+|... +|+.||||++.... ....+.+..|.+++..+. |++|+++.+++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3667789999999999999854 58899999987532 122346788999998885 577888999998889999999
Q ss_pred ecCCCCCHHHHHhcCCC
Q 004842 700 EFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~ 716 (728)
||+++|+|.+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~~ 97 (323)
T cd05615 81 EYVNGGDLMYHIQQVGK 97 (323)
T ss_pred cCCCCCcHHHHHHHcCC
Confidence 99999999999976543
No 223
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=98.91 E-value=2.8e-09 Score=111.26 Aligned_cols=99 Identities=26% Similarity=0.420 Sum_probs=81.8
Q ss_pred cchHHHHhhcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEe
Q 004842 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (728)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 691 (728)
+.++.+..+.++|+..+.||+|+||.||++... +++.+|+|.+..... ...++.+|+.++.++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 455667778889999999999999999999854 578999998865322 235688999999999 69999999999842
Q ss_pred -----CCeEEEEEecCCCCCHHHHHhc
Q 004842 692 -----EGEQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 692 -----~~~~~lV~Ey~~~GsL~~~L~~ 713 (728)
++..++||||+++|+|.++++.
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~ 113 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKG 113 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHH
Confidence 3568999999999999998863
No 224
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=98.91 E-value=3.6e-09 Score=109.06 Aligned_cols=89 Identities=34% Similarity=0.570 Sum_probs=76.0
Q ss_pred CCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
..|...+.||+|+||.||+|...+...||+|++..... ..++|.+|++++.+++|+||+++++++. .+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 45777889999999999999987777899999975432 3457999999999999999999999874 456899999999
Q ss_pred CCCHHHHHhcC
Q 004842 704 NGTLRDQLSGI 714 (728)
Q Consensus 704 ~GsL~~~L~~~ 714 (728)
+|+|.++++..
T Consensus 84 ~~~L~~~~~~~ 94 (262)
T cd05071 84 KGSLLDFLKGE 94 (262)
T ss_pred CCcHHHHHhhc
Confidence 99999999853
No 225
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.90 E-value=4.5e-09 Score=111.21 Aligned_cols=92 Identities=22% Similarity=0.397 Sum_probs=77.1
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
++|...+.||+|+||.||+|..+ ++..||+|+++.... .....+.+|++++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 45777889999999999999854 578899999875432 2234688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCCC
Q 004842 702 MSNGTLRDQLSGIFS 716 (728)
Q Consensus 702 ~~~GsL~~~L~~~~~ 716 (728)
+++ +|.+++.....
T Consensus 86 ~~~-~l~~~~~~~~~ 99 (309)
T cd07872 86 LDK-DLKQYMDDCGN 99 (309)
T ss_pred CCC-CHHHHHHhcCC
Confidence 985 89999876543
No 226
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=98.90 E-value=3.3e-09 Score=109.74 Aligned_cols=91 Identities=27% Similarity=0.452 Sum_probs=75.3
Q ss_pred CCcccCCceeccCceEEEEEEeCC----CCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
.+|...+.||+|+||.||+|...+ ...||||...... ....+.|.+|+.++++++|+||+++++++.. +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 346677899999999999998643 2468999887544 3445679999999999999999999999865 567899
Q ss_pred EecCCCCCHHHHHhcCC
Q 004842 699 YEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~ 715 (728)
|||+++|+|.+++....
T Consensus 85 ~e~~~~~~L~~~l~~~~ 101 (270)
T cd05056 85 MELAPLGELRSYLQVNK 101 (270)
T ss_pred EEcCCCCcHHHHHHhCC
Confidence 99999999999997643
No 227
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.90 E-value=3.4e-09 Score=113.62 Aligned_cols=89 Identities=25% Similarity=0.400 Sum_probs=72.5
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC-----eEEE
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQML 697 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~l 697 (728)
|+..+.||+|+||.||+|.. .+|..||||++.... ......+.+|++++++++|||||++++++...+ ..++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 56678999999999999985 458999999986432 223356899999999999999999999986432 4799
Q ss_pred EEecCCCCCHHHHHhcCC
Q 004842 698 VYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~~ 715 (728)
|||||+ |+|.+++....
T Consensus 82 v~e~~~-~~L~~~l~~~~ 98 (338)
T cd07859 82 VFELME-SDLHQVIKAND 98 (338)
T ss_pred EEecCC-CCHHHHHHhcc
Confidence 999996 69999987654
No 228
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=98.90 E-value=5.4e-09 Score=107.12 Aligned_cols=89 Identities=21% Similarity=0.343 Sum_probs=77.3
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
|+..+.||+|+||.||.+.. .++..+|+|.+.... ....++|.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 66778999999999998874 458899999986432 334567999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.+++...
T Consensus 82 ~~~~L~~~~~~~ 93 (256)
T cd08221 82 NGGTLYDKIVRQ 93 (256)
T ss_pred CCCcHHHHHHhc
Confidence 999999999865
No 229
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=98.90 E-value=4.1e-09 Score=109.82 Aligned_cols=82 Identities=28% Similarity=0.480 Sum_probs=70.2
Q ss_pred eeccCceEEEEEEeC-CCCEEEEEEcccCChh---cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCH
Q 004842 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (728)
Q Consensus 632 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (728)
||+|+||+||++... +|+.||||.+...... ..+.+..|++++++++|+||+++.+++......++|||||++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999854 5889999998653222 234678899999999999999999999988999999999999999
Q ss_pred HHHHhc
Q 004842 708 RDQLSG 713 (728)
Q Consensus 708 ~~~L~~ 713 (728)
.+++..
T Consensus 81 ~~~~~~ 86 (280)
T cd05608 81 RYHIYN 86 (280)
T ss_pred HHHHHh
Confidence 988853
No 230
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.90 E-value=5.9e-09 Score=107.62 Aligned_cols=92 Identities=28% Similarity=0.445 Sum_probs=76.2
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC-----hhcHHHHHHHHHHHhcCCCCcccceeEEEEe--CCeE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQ 695 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~ 695 (728)
.+|...+.||+|+||.||+|... .+..||+|++.... ....+.+.+|+.++++++|+||+++++++.. ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36788899999999999999854 58899999886432 1223468899999999999999999998865 3567
Q ss_pred EEEEecCCCCCHHHHHhcCC
Q 004842 696 MLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~~ 715 (728)
++|+||+++|+|.+++....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~ 101 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG 101 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC
Confidence 89999999999999998643
No 231
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.90 E-value=4.1e-09 Score=111.23 Aligned_cols=91 Identities=33% Similarity=0.614 Sum_probs=76.5
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCC--EEEEEEcccCC-hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~--~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 698 (728)
++|+..+.||+|+||.||+|..+ ++. .+|+|+++... ....++|.+|++++.++ +|+||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 45777889999999999999864 354 46888876532 23346789999999999 899999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 004842 699 YEFMSNGTLRDQLSGI 714 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~ 714 (728)
|||+++|+|.++++..
T Consensus 87 ~e~~~~~~L~~~l~~~ 102 (303)
T cd05088 87 IEYAPHGNLLDFLRKS 102 (303)
T ss_pred EEeCCCCcHHHHHHhc
Confidence 9999999999999854
No 232
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=98.90 E-value=4.7e-09 Score=111.96 Aligned_cols=87 Identities=25% Similarity=0.351 Sum_probs=69.7
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHH-HHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+.||+|+||.||+|... +++.||+|++..... ...+++..|.. +++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36899999999999864 578899999864321 22234555544 56789999999999999999999999999999
Q ss_pred CCHHHHHhcCCC
Q 004842 705 GTLRDQLSGIFS 716 (728)
Q Consensus 705 GsL~~~L~~~~~ 716 (728)
|+|.+++.....
T Consensus 81 ~~L~~~~~~~~~ 92 (325)
T cd05602 81 GELFYHLQRERC 92 (325)
T ss_pred CcHHHHHHhcCC
Confidence 999999986543
No 233
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=98.89 E-value=5.7e-09 Score=109.09 Aligned_cols=89 Identities=27% Similarity=0.453 Sum_probs=75.5
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
|+..++||+|+||.||++... +++.||||.+..... ...+.+.+|+.++++++|++++++.+++...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 556688999999999999854 588999999865322 2234578899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
+++|+|.++++..
T Consensus 82 ~~g~~L~~~l~~~ 94 (285)
T cd05630 82 MNGGDLKFHIYHM 94 (285)
T ss_pred cCCCcHHHHHHHh
Confidence 9999999999643
No 234
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=98.89 E-value=5.8e-09 Score=107.31 Aligned_cols=89 Identities=29% Similarity=0.476 Sum_probs=77.6
Q ss_pred CCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
.+|...+.||+|+||.||++...++..+|+|.+.... ...+.|.+|++++++++|+||+++.+++.. ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 4577789999999999999998777889999987543 234579999999999999999999999877 77899999999
Q ss_pred CCCHHHHHhcC
Q 004842 704 NGTLRDQLSGI 714 (728)
Q Consensus 704 ~GsL~~~L~~~ 714 (728)
+|+|.+++...
T Consensus 84 ~~~L~~~~~~~ 94 (260)
T cd05073 84 KGSLLDFLKSD 94 (260)
T ss_pred CCcHHHHHHhC
Confidence 99999999764
No 235
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.89 E-value=4.8e-09 Score=109.50 Aligned_cols=91 Identities=30% Similarity=0.446 Sum_probs=75.8
Q ss_pred CcccCCceeccCceEEEEEEe-----CCCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeC--CeEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQM 696 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 696 (728)
.|+..+.||+|+||.||.+.+ .++..||+|.++... ....++|.+|++++++++|+||+++.+++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 356678899999999999974 247789999987543 23345799999999999999999999999765 5689
Q ss_pred EEEecCCCCCHHHHHhcCC
Q 004842 697 LVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~ 715 (728)
+||||+++|+|.+++....
T Consensus 85 lv~e~~~g~~L~~~l~~~~ 103 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK 103 (284)
T ss_pred EEEEccCCCCHHHHHHhcc
Confidence 9999999999999997643
No 236
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.89 E-value=1.8e-09 Score=109.76 Aligned_cols=90 Identities=28% Similarity=0.473 Sum_probs=75.4
Q ss_pred CcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCc-ccceeEEEEeCC------e
Q 004842 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEG------E 694 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~------~ 694 (728)
.|...++||+|+||.||+|. ..+|+.||+|++..... +....-.+|+.++++++|+| ||+|.+++...+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 35555679999999999998 45689999999975433 22345689999999999999 999999998877 7
Q ss_pred EEEEEecCCCCCHHHHHhcCC
Q 004842 695 QMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
.++|+||++. ||.+|+....
T Consensus 92 l~lvfe~~d~-DL~~ymd~~~ 111 (323)
T KOG0594|consen 92 LYLVFEFLDR-DLKKYMDSLP 111 (323)
T ss_pred EEEEEEeecc-cHHHHHHhcc
Confidence 8999999987 9999998754
No 237
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.89 E-value=5.1e-09 Score=108.98 Aligned_cols=92 Identities=28% Similarity=0.500 Sum_probs=76.6
Q ss_pred CCcccCCceeccCceEEEEEEeCC-CC----EEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD-GT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g~----~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
.+|...+.||+|+||.||+|..++ |. .||+|.+..... ....++.+|+.++++++|+||++++|+|.. +..++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 346677899999999999998643 33 689999876543 334679999999999999999999999987 78899
Q ss_pred EEecCCCCCHHHHHhcCCC
Q 004842 698 VYEFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~~~ 716 (728)
||||+++|+|.++++....
T Consensus 86 v~e~~~~g~L~~~l~~~~~ 104 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKD 104 (279)
T ss_pred EEecCCCCcHHHHHHhccC
Confidence 9999999999999987543
No 238
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=98.89 E-value=3.1e-09 Score=118.64 Aligned_cols=113 Identities=27% Similarity=0.428 Sum_probs=90.8
Q ss_pred chHHHHhhcCCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEe-
Q 004842 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE- 691 (728)
Q Consensus 615 ~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~- 691 (728)
.++.+...+.-|....+||.|.+|.||+++ .++|+.+|||++..... .+++...|.++++.. .|||++.++|++..
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 345555667778888999999999999998 56689999999876432 345677888888877 79999999999854
Q ss_pred ----CCeEEEEEecCCCCCHHHHHhcC-CCcccccccccccC
Q 004842 692 ----EGEQMLVYEFMSNGTLRDQLSGI-FSVIRHSGICFFLH 728 (728)
Q Consensus 692 ----~~~~~lV~Ey~~~GsL~~~L~~~-~~~~~~~~~~~~~~ 728 (728)
++++|||||||.+|+..|.+.+- ....+|..++|++|
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~r 130 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILR 130 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHH
Confidence 57899999999999999999863 34466888888764
No 239
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.89 E-value=5.9e-09 Score=109.16 Aligned_cols=89 Identities=30% Similarity=0.543 Sum_probs=75.6
Q ss_pred CcccCCceeccCceEEEEEEeC------CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
+|+..+.||+|+||.||+|... ....+|+|.+..... ...++|.+|+.+++.++|||||+++++|...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 3667789999999999999842 235789998875432 334579999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhc
Q 004842 698 VYEFMSNGTLRDQLSG 713 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~ 713 (728)
|+||+++|+|.+++..
T Consensus 81 v~e~~~~~~L~~~l~~ 96 (290)
T cd05045 81 IVEYAKYGSLRSFLRE 96 (290)
T ss_pred EEEecCCCCHHHHHHh
Confidence 9999999999999875
No 240
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.89 E-value=4.5e-09 Score=110.03 Aligned_cols=92 Identities=24% Similarity=0.425 Sum_probs=77.3
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChh-cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
++|+..+.||+|+||.||+|..+ +++.||||.+...... ....+.+|++++++++|+||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 46777889999999999999865 5889999998653222 234578899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCCC
Q 004842 702 MSNGTLRDQLSGIFS 716 (728)
Q Consensus 702 ~~~GsL~~~L~~~~~ 716 (728)
++ |+|.+++.....
T Consensus 85 ~~-~~L~~~~~~~~~ 98 (291)
T cd07844 85 LD-TDLKQYMDDCGG 98 (291)
T ss_pred CC-CCHHHHHHhCCC
Confidence 98 599999976443
No 241
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=98.89 E-value=5.4e-09 Score=109.16 Aligned_cols=93 Identities=26% Similarity=0.412 Sum_probs=82.2
Q ss_pred hcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
.+..|+..+.||+|+||.||+|..+ ++..||+|++..... ..+.+.+|++++++++|+|++++++++...+..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4556777789999999999999976 588999999976544 45679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
|+++++|.+++....
T Consensus 96 ~~~~~~L~~~l~~~~ 110 (286)
T cd06614 96 YMDGGSLTDIITQNF 110 (286)
T ss_pred ccCCCcHHHHHHHhc
Confidence 999999999998764
No 242
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.89 E-value=5.8e-09 Score=109.88 Aligned_cols=91 Identities=25% Similarity=0.408 Sum_probs=76.8
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
++|...+.||+|+||.||+|..+ +++.||+|.+..... .....+.+|+.++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 45777889999999999999864 578999999864322 2234678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCC
Q 004842 702 MSNGTLRDQLSGIF 715 (728)
Q Consensus 702 ~~~GsL~~~L~~~~ 715 (728)
++ |+|.+++....
T Consensus 86 ~~-~~l~~~l~~~~ 98 (301)
T cd07873 86 LD-KDLKQYLDDCG 98 (301)
T ss_pred cc-cCHHHHHHhcC
Confidence 98 69999987643
No 243
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=98.89 E-value=6.2e-09 Score=108.78 Aligned_cols=89 Identities=26% Similarity=0.451 Sum_probs=75.5
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
|+..+.||+|+||+||+|.. .+++.||+|.+..... ...+.+.+|++++.+++|+||+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 45567899999999999986 4588999999865422 2234578899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
+++|+|.+++...
T Consensus 82 ~~~~~L~~~~~~~ 94 (285)
T cd05632 82 MNGGDLKFHIYNM 94 (285)
T ss_pred ccCccHHHHHHHh
Confidence 9999999998753
No 244
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=98.89 E-value=4.6e-09 Score=108.36 Aligned_cols=90 Identities=28% Similarity=0.467 Sum_probs=77.6
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
++|+..+.||+|+||.||++.. .++..+|||.+.... ....++|.+|+.+++.++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3567778999999999999995 578999999886532 223457999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 004842 700 EFMSNGTLRDQLSG 713 (728)
Q Consensus 700 Ey~~~GsL~~~L~~ 713 (728)
||+++|+|.+++..
T Consensus 82 e~~~~~~L~~~~~~ 95 (267)
T cd08229 82 ELADAGDLSRMIKH 95 (267)
T ss_pred EecCCCCHHHHHHH
Confidence 99999999999863
No 245
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=98.89 E-value=7e-09 Score=107.04 Aligned_cols=90 Identities=26% Similarity=0.450 Sum_probs=75.8
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChh---------cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeE
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~---------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 695 (728)
|.....||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.++++++||||+++++++...+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 45668899999999999985 35789999988643221 124688999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhcCC
Q 004842 696 MLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~~ 715 (728)
++||||+++++|.+++....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~ 101 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYG 101 (267)
T ss_pred EEEEEecCCCCHHHHHHhcc
Confidence 99999999999999997643
No 246
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.88 E-value=6.3e-09 Score=109.40 Aligned_cols=91 Identities=24% Similarity=0.422 Sum_probs=80.0
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
.+|+..+.||.|+||.||+|.. .+|+.||+|.+........+.+.+|+++++.++|+||+++++++...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4577788999999999999984 568999999987654444567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.+++...
T Consensus 99 ~~~~L~~~~~~~ 110 (296)
T cd06655 99 AGGSLTDVVTET 110 (296)
T ss_pred CCCcHHHHHHhc
Confidence 999999998764
No 247
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=98.88 E-value=5.2e-09 Score=107.62 Aligned_cols=88 Identities=33% Similarity=0.541 Sum_probs=76.2
Q ss_pred CcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+|+..+.||+|+||.||+|..+++..||+|.+..... ..++|.+|+.++++++|+|++++++++. .+..++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSK 84 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence 4666789999999999999988888899999976433 3467999999999999999999999874 4568999999999
Q ss_pred CCHHHHHhcC
Q 004842 705 GTLRDQLSGI 714 (728)
Q Consensus 705 GsL~~~L~~~ 714 (728)
|+|.+++++.
T Consensus 85 ~~L~~~~~~~ 94 (260)
T cd05070 85 GSLLDFLKDG 94 (260)
T ss_pred CcHHHHHHhc
Confidence 9999999763
No 248
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.88 E-value=5.6e-09 Score=110.39 Aligned_cols=91 Identities=24% Similarity=0.500 Sum_probs=77.0
Q ss_pred CCcccCCceeccCceEEEEEEeC--------CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 693 (728)
++|...+.||+|+||.||++... ++..+|+|.++... .....++.+|++++.++ +|+||++++++|...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 45777899999999999999742 23579999997542 23345788999999999 8999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 004842 694 EQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
..++||||+++|+|.++++.+
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~ 118 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRAR 118 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhc
Confidence 999999999999999999864
No 249
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=98.88 E-value=6.4e-09 Score=111.01 Aligned_cols=85 Identities=24% Similarity=0.296 Sum_probs=72.5
Q ss_pred CCceecc--CceEEEEEEe-CCCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 629 STQIGQG--GYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 629 ~~~iG~G--~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
.++||+| +|++||++.. .+|+.||||+++.... ...+.+.+|+++++.++|||||++++++..++..++|||||+
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4689999 6889999985 4689999999975422 223457789999999999999999999999999999999999
Q ss_pred CCCHHHHHhc
Q 004842 704 NGTLRDQLSG 713 (728)
Q Consensus 704 ~GsL~~~L~~ 713 (728)
+|+|.+++..
T Consensus 83 ~~~l~~~~~~ 92 (327)
T cd08227 83 YGSAKDLICT 92 (327)
T ss_pred CCcHHHHHHh
Confidence 9999999964
No 250
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.88 E-value=6e-09 Score=108.66 Aligned_cols=89 Identities=31% Similarity=0.478 Sum_probs=73.6
Q ss_pred cccCCceeccCceEEEEEEe-----CCCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeC--CeEEE
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 697 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l 697 (728)
+...+.||+|+||+||.+.+ .++..||+|.++.... ...+.|.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 36678899999999988653 3577899999975432 2346799999999999999999999998653 45899
Q ss_pred EEecCCCCCHHHHHhcC
Q 004842 698 VYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~ 714 (728)
||||+++|+|.+++...
T Consensus 86 v~e~~~~~~l~~~~~~~ 102 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH 102 (283)
T ss_pred EecCCCCCCHHHHHHHc
Confidence 99999999999999764
No 251
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.88 E-value=3.4e-09 Score=117.72 Aligned_cols=93 Identities=24% Similarity=0.488 Sum_probs=71.3
Q ss_pred hcCCcccCCceeccCceEEEEEEe-----------------CCCCEEEEEEcccCChhcHHH--------------HHHH
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGIL-----------------PDGTVVAVKRAQEGSLQGEKE--------------FLTE 670 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-----------------~~g~~vAvK~l~~~~~~~~~~--------------f~~E 670 (728)
..++|...++||+|+||.||+|.. .+++.||||++........++ +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 235689999987543332333 3457
Q ss_pred HHHHhcCCCCcc-----cceeEEEEe--------CCeEEEEEecCCCCCHHHHHhcC
Q 004842 671 IQFLSRLHHRNL-----VSLVGYCDE--------EGEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 671 ~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
+.++.+++|.++ ++++|||.. .+..|||||||++|+|.++|+..
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~ 279 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGK 279 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhc
Confidence 777778877655 778888753 35689999999999999999864
No 252
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.88 E-value=5.1e-09 Score=110.05 Aligned_cols=89 Identities=28% Similarity=0.484 Sum_probs=76.5
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChh-----cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-----GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
|+..+.||+|+||.||+|... +|+.||||.+...... ....+..|++++++++|+||+++++++...+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 566788999999999999964 5889999999754322 2345788999999999999999999999989999999
Q ss_pred ecCCCCCHHHHHhcCC
Q 004842 700 EFMSNGTLRDQLSGIF 715 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~ 715 (728)
||+ +|+|.++++...
T Consensus 82 e~~-~~~L~~~i~~~~ 96 (298)
T cd07841 82 EFM-ETDLEKVIKDKS 96 (298)
T ss_pred ccc-CCCHHHHHhccC
Confidence 999 999999998754
No 253
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.88 E-value=5.9e-09 Score=108.66 Aligned_cols=90 Identities=33% Similarity=0.628 Sum_probs=76.6
Q ss_pred CcccCCceeccCceEEEEEEeCC------CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
+|+..+.||+|+||.||+|.... ...||+|.+..... ....+|.+|++++.+++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 56677899999999999998533 25799999975432 234579999999999999999999999998889999
Q ss_pred EEecCCCCCHHHHHhcC
Q 004842 698 VYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~ 714 (728)
+|||+++|+|.+++...
T Consensus 86 ~~e~~~~~~L~~~l~~~ 102 (283)
T cd05048 86 LFEYLAHGDLHEFLVRN 102 (283)
T ss_pred EEecCCCCcHHHHHHhc
Confidence 99999999999999764
No 254
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=98.87 E-value=5.2e-09 Score=108.29 Aligned_cols=93 Identities=30% Similarity=0.499 Sum_probs=77.2
Q ss_pred hhcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEeC------
Q 004842 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE------ 692 (728)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~------ 692 (728)
.+++.|+..+.||+|+||.||+|... +++.||+|.+.... ....++.+|+.++.++ +|+||++++|++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 34566777889999999999999864 47899999986543 3345788999999998 799999999998753
Q ss_pred CeEEEEEecCCCCCHHHHHhcC
Q 004842 693 GEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
...++||||+++|+|.+++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~ 103 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNT 103 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhc
Confidence 4579999999999999999863
No 255
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=98.87 E-value=6.4e-09 Score=110.82 Aligned_cols=92 Identities=20% Similarity=0.254 Sum_probs=75.2
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 699 (728)
+|...+.||+|+||.||+|... +++.||||.+..... ...+.+..|.+++... +|++|+++.+++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4667789999999999999865 478999999875321 2234577788888877 6899999999999999999999
Q ss_pred ecCCCCCHHHHHhcCCC
Q 004842 700 EFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~ 716 (728)
||+++|+|.+++.....
T Consensus 81 E~~~~g~L~~~~~~~~~ 97 (323)
T cd05616 81 EYVNGGDLMYQIQQVGR 97 (323)
T ss_pred cCCCCCCHHHHHHHcCC
Confidence 99999999999976543
No 256
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=98.87 E-value=6.6e-09 Score=109.24 Aligned_cols=91 Identities=29% Similarity=0.563 Sum_probs=76.7
Q ss_pred CCcccCCceeccCceEEEEEEeCC-CC--EEEEEEcccC-ChhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD-GT--VVAVKRAQEG-SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g~--~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 698 (728)
++|+..++||+|+||.||+|...+ +. .+|+|.++.. .....+.|.+|++++.++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 467788999999999999998654 33 4789988753 223346799999999999 799999999999988899999
Q ss_pred EecCCCCCHHHHHhcC
Q 004842 699 YEFMSNGTLRDQLSGI 714 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~ 714 (728)
+||+++|+|.++++..
T Consensus 82 ~e~~~~~~L~~~l~~~ 97 (297)
T cd05089 82 IEYAPYGNLLDFLRKS 97 (297)
T ss_pred EEecCCCcHHHHHHhc
Confidence 9999999999999753
No 257
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.87 E-value=2.9e-09 Score=111.71 Aligned_cols=86 Identities=27% Similarity=0.374 Sum_probs=75.4
Q ss_pred CCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCH
Q 004842 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (728)
...||+|+||.||++... ++..||||.+........+.+.+|+.++++++|+||+++++++...+..++||||+++|+|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 366999999999999853 5889999998765545556799999999999999999999999999999999999999999
Q ss_pred HHHHhcC
Q 004842 708 RDQLSGI 714 (728)
Q Consensus 708 ~~~L~~~ 714 (728)
.+++...
T Consensus 107 ~~~~~~~ 113 (292)
T cd06658 107 TDIVTHT 113 (292)
T ss_pred HHHHhcC
Confidence 9998653
No 258
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.87 E-value=2.8e-09 Score=109.39 Aligned_cols=90 Identities=28% Similarity=0.349 Sum_probs=78.4
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|+..+.||+|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++||||+++++++......++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 3667789999999999999965 488999999965322 334679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
|+++|+|.+++...
T Consensus 81 ~~~~~~L~~~l~~~ 94 (258)
T cd05578 81 LLLGGDLRYHLSQK 94 (258)
T ss_pred CCCCCCHHHHHHhc
Confidence 99999999999765
No 259
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=98.87 E-value=5.1e-09 Score=109.74 Aligned_cols=94 Identities=27% Similarity=0.562 Sum_probs=78.6
Q ss_pred hhcCCcccCCceeccCceEEEEEEeCC------CCEEEEEEcccCC-hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeC
Q 004842 621 LATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (728)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 692 (728)
...++|+..+.||+|+||.||++...+ ...+|+|.+.... .....++.+|++++.++ +|+||+++++++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 344567778899999999999998632 3579999987542 23345789999999999 899999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhcC
Q 004842 693 GEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
+..++||||+++|+|.++++..
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~ 110 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRAR 110 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhc
Confidence 9999999999999999999753
No 260
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.87 E-value=8.9e-09 Score=107.65 Aligned_cols=89 Identities=20% Similarity=0.285 Sum_probs=75.1
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeC--CeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~E 700 (728)
+|...+.||+|++|.||++... +++.+|+|.+..... ...+++.+|++++++++|+||++++++|... +..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 5677789999999999999964 578999999875432 3346799999999999999999999998653 46899999
Q ss_pred cCCCCCHHHHHhc
Q 004842 701 FMSNGTLRDQLSG 713 (728)
Q Consensus 701 y~~~GsL~~~L~~ 713 (728)
|+++|+|.+++..
T Consensus 82 ~~~~~~L~~~l~~ 94 (287)
T cd06621 82 YCEGGSLDSIYKK 94 (287)
T ss_pred ecCCCCHHHHHHH
Confidence 9999999998763
No 261
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=98.86 E-value=6.6e-09 Score=108.36 Aligned_cols=90 Identities=30% Similarity=0.466 Sum_probs=76.9
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|+....||+|+||.||+|..+ +|+.||+|++.... ....+.|.+|++++++++|+|++++++++......++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 5677789999999999999965 58899999986432 22335688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
++++.|.+++...
T Consensus 82 ~~~~~l~~~~~~~ 94 (286)
T cd07847 82 CDHTVLNELEKNP 94 (286)
T ss_pred cCccHHHHHHhCC
Confidence 9999998887654
No 262
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.86 E-value=7.6e-09 Score=110.42 Aligned_cols=86 Identities=22% Similarity=0.269 Sum_probs=72.5
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+.||+|+||.||+|... +++.||||+++.... ...+.+.+|+.++.++ +|+||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999864 478999999975422 2234588999999888 699999999999999999999999999
Q ss_pred CCHHHHHhcCC
Q 004842 705 GTLRDQLSGIF 715 (728)
Q Consensus 705 GsL~~~L~~~~ 715 (728)
|+|.+++....
T Consensus 81 ~~L~~~~~~~~ 91 (327)
T cd05617 81 GDLMFHMQRQR 91 (327)
T ss_pred CcHHHHHHHcC
Confidence 99999987543
No 263
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.86 E-value=4.1e-09 Score=110.90 Aligned_cols=86 Identities=26% Similarity=0.327 Sum_probs=75.1
Q ss_pred CCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCH
Q 004842 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (728)
...||+|+||.||++... +++.||+|.+........+.+.+|+.++..++||||+++++++..++..++||||+++|+|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 357999999999999854 6889999998765444456789999999999999999999999999999999999999999
Q ss_pred HHHHhcC
Q 004842 708 RDQLSGI 714 (728)
Q Consensus 708 ~~~L~~~ 714 (728)
.+++...
T Consensus 106 ~~~~~~~ 112 (297)
T cd06659 106 TDIVSQT 112 (297)
T ss_pred HHHHhhc
Confidence 9988653
No 264
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.86 E-value=1.9e-09 Score=116.67 Aligned_cols=89 Identities=27% Similarity=0.422 Sum_probs=76.6
Q ss_pred CceeccCceEEEEEEeCC-CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCHH
Q 004842 630 TQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL~ 708 (728)
-++|+|.||+||.|.-.+ ...+|||.+.....+..+-...|+.+-++++|.|||+++|+|.+.+..-|.||-+|+|+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 479999999999998443 5578999998765544456788999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcc
Q 004842 709 DQLSGIFSVI 718 (728)
Q Consensus 709 ~~L~~~~~~~ 718 (728)
+.|+.+.+..
T Consensus 661 sLLrskWGPl 670 (1226)
T KOG4279|consen 661 SLLRSKWGPL 670 (1226)
T ss_pred HHHHhccCCC
Confidence 9999765443
No 265
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=98.86 E-value=8.9e-09 Score=107.12 Aligned_cols=83 Identities=27% Similarity=0.454 Sum_probs=70.3
Q ss_pred eeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCH
Q 004842 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (728)
Q Consensus 632 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (728)
||+|+||.||++..+ +|+.||+|++..... ...+.+..|++++.+++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999854 589999999864321 2234567799999999999999999999999999999999999999
Q ss_pred HHHHhcC
Q 004842 708 RDQLSGI 714 (728)
Q Consensus 708 ~~~L~~~ 714 (728)
.++++..
T Consensus 81 ~~~~~~~ 87 (277)
T cd05607 81 KYHIYNV 87 (277)
T ss_pred HHHHHhc
Confidence 9988653
No 266
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.86 E-value=7.1e-09 Score=110.12 Aligned_cols=86 Identities=22% Similarity=0.296 Sum_probs=71.2
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
++||+|+||.||+|+.. +|..||||.++.... ...+.+..|.+++... +|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999965 588999999975321 2234567788888754 899999999999999999999999999
Q ss_pred CCHHHHHhcCC
Q 004842 705 GTLRDQLSGIF 715 (728)
Q Consensus 705 GsL~~~L~~~~ 715 (728)
|+|.+++..+.
T Consensus 81 g~L~~~i~~~~ 91 (316)
T cd05620 81 GDLMFHIQDKG 91 (316)
T ss_pred CcHHHHHHHcC
Confidence 99999997653
No 267
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.86 E-value=6.4e-09 Score=108.87 Aligned_cols=91 Identities=25% Similarity=0.356 Sum_probs=76.5
Q ss_pred CcccCCceeccCceEEEEEEe----CCCCEEEEEEcccCCh----hcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeE
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 695 (728)
+|+..+.||+|+||.||++.. .+|..||+|++..... ...+.+.+|+.++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 356678899999999999985 3688999999875322 2235688999999999 589999999999888899
Q ss_pred EEEEecCCCCCHHHHHhcCC
Q 004842 696 MLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~~ 715 (728)
++||||+++|+|.+++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~ 100 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE 100 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC
Confidence 99999999999999997654
No 268
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.86 E-value=6.2e-09 Score=106.71 Aligned_cols=85 Identities=41% Similarity=0.686 Sum_probs=75.2
Q ss_pred CceeccCceEEEEEEeCC----CCEEEEEEcccCChhc-HHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~-~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+.||+|+||.||+|.... +..||||.++...... .+++.+|++.+..++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 468999999999999653 7789999997654333 56899999999999999999999999998999999999999
Q ss_pred CCHHHHHhcC
Q 004842 705 GTLRDQLSGI 714 (728)
Q Consensus 705 GsL~~~L~~~ 714 (728)
|+|.+++...
T Consensus 81 ~~L~~~l~~~ 90 (262)
T cd00192 81 GDLLDYLRKS 90 (262)
T ss_pred CcHHHHHhhc
Confidence 9999999875
No 269
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=98.86 E-value=8.9e-09 Score=105.53 Aligned_cols=89 Identities=24% Similarity=0.404 Sum_probs=77.3
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
|+..+.||+|+||.||++.. .+|+.||+|++... .....+++.+|++++++++|+||+++.+++...+..++||||+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 66678999999999999985 45889999998643 2233457999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.++++..
T Consensus 82 ~~~~l~~~~~~~ 93 (256)
T cd08218 82 EGGDLYKKINAQ 93 (256)
T ss_pred CCCcHHHHHHhc
Confidence 999999999764
No 270
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.86 E-value=6e-09 Score=109.35 Aligned_cols=85 Identities=26% Similarity=0.406 Sum_probs=75.2
Q ss_pred CceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCHH
Q 004842 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL~ 708 (728)
.+||+|+||.||++.. .++..||||++........+.+.+|+.++++++|+||+++++++...+..++||||+++|+|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5799999999999986 468899999986654445567999999999999999999999999999999999999999999
Q ss_pred HHHhcC
Q 004842 709 DQLSGI 714 (728)
Q Consensus 709 ~~L~~~ 714 (728)
+++...
T Consensus 106 ~~~~~~ 111 (292)
T cd06657 106 DIVTHT 111 (292)
T ss_pred HHHhcC
Confidence 988653
No 271
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.86 E-value=8.3e-09 Score=106.75 Aligned_cols=88 Identities=30% Similarity=0.501 Sum_probs=72.7
Q ss_pred cccCCceeccCceEEEEEEeCC----CCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCe-----
Q 004842 626 FNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 694 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----- 694 (728)
|...+.||+|+||.||+|.... +..||||+++... ....++|.+|++.++.++|+||++++|++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 3456889999999999998642 3679999987532 2334579999999999999999999999876554
Q ss_pred -EEEEEecCCCCCHHHHHhc
Q 004842 695 -QMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 695 -~~lV~Ey~~~GsL~~~L~~ 713 (728)
.++|+||+++|+|.++++.
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~ 100 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLY 100 (273)
T ss_pred ccEEEEeccCCCCHHHHHHH
Confidence 7999999999999999864
No 272
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.86 E-value=6.9e-09 Score=107.97 Aligned_cols=92 Identities=25% Similarity=0.415 Sum_probs=77.9
Q ss_pred cCCcccCCceeccCceEEEEEEeCC-----CCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEe-CCeE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQ 695 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~ 695 (728)
.++|...++||+|+||.||+|...+ +..||+|++.... ....+.+.+|+.++++++|+||++++|++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4567788999999999999999755 6789999987543 2334578999999999999999999999876 4678
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 004842 696 MLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~ 714 (728)
++++||+++|+|.+++...
T Consensus 85 ~~~~~~~~~~~L~~~l~~~ 103 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQC 103 (280)
T ss_pred EEEEEcCCCCcHHHHHHhc
Confidence 9999999999999999753
No 273
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=98.85 E-value=1e-08 Score=106.29 Aligned_cols=90 Identities=27% Similarity=0.354 Sum_probs=78.2
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
+|+..+.||.|+||.||+|... +++.||+|.+.... .....++.+|++++++++|+||+++.+++..+...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 4666788999999999999864 58899999986543 233457899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.++++..
T Consensus 82 ~~~~L~~~~~~~ 93 (274)
T cd06609 82 GGGSCLDLLKPG 93 (274)
T ss_pred CCCcHHHHHhhc
Confidence 999999999865
No 274
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.85 E-value=6.7e-09 Score=106.64 Aligned_cols=84 Identities=29% Similarity=0.473 Sum_probs=70.4
Q ss_pred ceeccCceEEEEEEe---CCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCC
Q 004842 631 QIGQGGYGKVYKGIL---PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (728)
Q Consensus 631 ~iG~G~fg~Vy~~~~---~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~G 705 (728)
.||+|+||.||+|.+ +++..+|+|.++... ....++|.+|+.++++++|+||++++|++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999975 347889999986443 223467999999999999999999999985 45678999999999
Q ss_pred CHHHHHhcCC
Q 004842 706 TLRDQLSGIF 715 (728)
Q Consensus 706 sL~~~L~~~~ 715 (728)
+|.+++....
T Consensus 81 ~L~~~l~~~~ 90 (257)
T cd05116 81 PLNKFLQKNK 90 (257)
T ss_pred cHHHHHHhcC
Confidence 9999997654
No 275
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=98.85 E-value=6.8e-09 Score=106.91 Aligned_cols=90 Identities=23% Similarity=0.383 Sum_probs=78.9
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
+|+..+.||+|+||.||++... +++.||+|.+.... ....+++.+|++++++++|+||+++++++...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 4666788999999999999965 58899999987643 234567999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++++|.+++...
T Consensus 82 ~~~~L~~~~~~~ 93 (265)
T cd06605 82 DGGSLDKILKEV 93 (265)
T ss_pred CCCcHHHHHHHc
Confidence 999999999865
No 276
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=98.85 E-value=8.3e-09 Score=105.82 Aligned_cols=85 Identities=32% Similarity=0.458 Sum_probs=73.5
Q ss_pred CceeccCceEEEEEEeCC--C--CEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILPD--G--TVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~--g--~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
++||+|++|.||+|.+.+ + ..||||.+..... ...++|.+|+.++++++|+|||++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 368999999999998643 3 3699999987655 455689999999999999999999999987 889999999999
Q ss_pred CCHHHHHhcCC
Q 004842 705 GTLRDQLSGIF 715 (728)
Q Consensus 705 GsL~~~L~~~~ 715 (728)
|+|.+++....
T Consensus 80 ~~L~~~l~~~~ 90 (257)
T cd05040 80 GSLLDRLRKDA 90 (257)
T ss_pred CcHHHHHHhcc
Confidence 99999998753
No 277
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.85 E-value=6.6e-09 Score=106.37 Aligned_cols=89 Identities=38% Similarity=0.633 Sum_probs=77.3
Q ss_pred ccCCceeccCceEEEEEEeCC-----CCEEEEEEcccCChh-cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 627 NSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 627 ~~~~~iG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+..+.||+|+||.||++...+ +..||+|++...... ..+.+.+|++.+.+++|+||+++++++...+..++|||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456789999999999999654 378999999765433 45689999999999999999999999999899999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
|+++|+|.+++....
T Consensus 82 ~~~~~~l~~~~~~~~ 96 (258)
T smart00219 82 YMEGGDLLDYLRKNR 96 (258)
T ss_pred ccCCCCHHHHHHhhh
Confidence 999999999998644
No 278
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=98.85 E-value=7.3e-09 Score=107.54 Aligned_cols=91 Identities=27% Similarity=0.506 Sum_probs=77.7
Q ss_pred CCcccCCceeccCceEEEEEEeCC------CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 696 (728)
++|...+.||+|+||.||+|...+ +..||+|.+..... ....+|.+|+.+++.++|+||++++|++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 457777899999999999998642 36899999875432 33457999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhcC
Q 004842 697 LVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~ 714 (728)
+||||+++|+|.+++...
T Consensus 86 ~v~e~~~~~~L~~~l~~~ 103 (277)
T cd05032 86 VVMELMAKGDLKSYLRSR 103 (277)
T ss_pred EEEecCCCCCHHHHHHhc
Confidence 999999999999999753
No 279
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.85 E-value=7e-09 Score=106.70 Aligned_cols=86 Identities=34% Similarity=0.558 Sum_probs=70.7
Q ss_pred CceeccCceEEEEEEeCC----CCEEEEEEcccC-ChhcHHHHHHHHHHHhcCCCCcccceeEEEEe-CCeEEEEEecCC
Q 004842 630 TQIGQGGYGKVYKGILPD----GTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQMLVYEFMS 703 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~Ey~~ 703 (728)
+.||+|+||.||+|...+ +..||+|++... .....+.|.+|+.+++.++||||++++|+|.. ++..++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998532 357999998643 23345678999999999999999999998864 556899999999
Q ss_pred CCCHHHHHhcCC
Q 004842 704 NGTLRDQLSGIF 715 (728)
Q Consensus 704 ~GsL~~~L~~~~ 715 (728)
+|+|.++++...
T Consensus 81 ~~~L~~~~~~~~ 92 (262)
T cd05058 81 HGDLRNFIRSET 92 (262)
T ss_pred CCCHHHHHHhcC
Confidence 999999998643
No 280
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=98.85 E-value=1.5e-08 Score=103.90 Aligned_cols=89 Identities=18% Similarity=0.327 Sum_probs=76.5
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
+|+..+.||+|+||.||++... ++..+|+|.++... ....+.+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 3566789999999999999854 58899999986432 233457889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhc
Q 004842 703 SNGTLRDQLSG 713 (728)
Q Consensus 703 ~~GsL~~~L~~ 713 (728)
++|+|.+++..
T Consensus 81 ~~~~l~~~~~~ 91 (255)
T cd08219 81 DGGDLMQKIKL 91 (255)
T ss_pred CCCcHHHHHHh
Confidence 99999999875
No 281
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.85 E-value=7.1e-09 Score=108.09 Aligned_cols=89 Identities=26% Similarity=0.306 Sum_probs=76.9
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++|+||+++++++..+...++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 566788999999999999964 58899999987543 223467999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCC
Q 004842 703 SNGTLRDQLSGIF 715 (728)
Q Consensus 703 ~~GsL~~~L~~~~ 715 (728)
+|+|.++++...
T Consensus 82 -~~~L~~~~~~~~ 93 (286)
T cd07832 82 -PSDLSEVLRDEE 93 (286)
T ss_pred -CCCHHHHHHhcC
Confidence 999999997543
No 282
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.85 E-value=8.1e-09 Score=108.94 Aligned_cols=91 Identities=23% Similarity=0.540 Sum_probs=76.7
Q ss_pred CCcccCCceeccCceEEEEEEeC--------CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 693 (728)
.+|...+.||+|+||.||+|... ++..||+|.+.... ....+++.+|+.++..+ +|+||+++++++...+
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 45667789999999999999741 24579999987532 23346799999999999 8999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 004842 694 EQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
..++||||+++|+|.++++..
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~ 115 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRAR 115 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhc
Confidence 999999999999999999864
No 283
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.84 E-value=1.3e-09 Score=108.08 Aligned_cols=102 Identities=20% Similarity=0.361 Sum_probs=87.5
Q ss_pred chHHHHhhcCCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEeC
Q 004842 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (728)
Q Consensus 615 ~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 692 (728)
+++|+..-|. +++|+|+|+.|-.++ +..|..+|||++.+.....+....+|++++... .|+||++|+.++.++
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 4666666554 679999999999987 678999999999876555566788999999988 699999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhcCCCccccc
Q 004842 693 GEQMLVYEFMSNGTLRDQLSGIFSVIRHS 721 (728)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~ 721 (728)
+..|||||=|.+|.|..+|+++....+++
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~~F~E~E 177 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRKHFNERE 177 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhhhccHHH
Confidence 99999999999999999999887665543
No 284
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=98.84 E-value=3.7e-09 Score=107.36 Aligned_cols=93 Identities=25% Similarity=0.390 Sum_probs=75.5
Q ss_pred cCCcccCCceeccCceEEEEEEe-CCCCEEEEEEccc--CChhcHHHHHHHHHHHhcCCCCcccceeEEEEe-----CCe
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-----EGE 694 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-----~~~ 694 (728)
...|...+.||+|+||.|..+.. .+|..||||++.. ......+.-.+|+++++.++|+|||.+...... ...
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 34455567899999999999984 4689999999973 233344677899999999999999999998865 356
Q ss_pred EEEEEecCCCCCHHHHHhcCCC
Q 004842 695 QMLVYEFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~~~ 716 (728)
.|+|+|+|+. ||.+.|+....
T Consensus 101 vYiV~elMet-DL~~iik~~~~ 121 (359)
T KOG0660|consen 101 VYLVFELMET-DLHQIIKSQQD 121 (359)
T ss_pred eEEehhHHhh-HHHHHHHcCcc
Confidence 8999999965 99999997653
No 285
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.84 E-value=9.2e-09 Score=105.86 Aligned_cols=84 Identities=19% Similarity=0.297 Sum_probs=73.2
Q ss_pred eeccCceEEEEEEeCC-CCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCH
Q 004842 632 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (728)
Q Consensus 632 iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (728)
||+|+||.||++.... ++.||+|.+..... ...+.+.+|++++++++|+||+++++++..+...++|+||+++|+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 6999999999999654 88999999865322 2345799999999999999999999999999999999999999999
Q ss_pred HHHHhcCC
Q 004842 708 RDQLSGIF 715 (728)
Q Consensus 708 ~~~L~~~~ 715 (728)
.++++...
T Consensus 81 ~~~l~~~~ 88 (262)
T cd05572 81 WTILRDRG 88 (262)
T ss_pred HHHHhhcC
Confidence 99998754
No 286
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=98.84 E-value=4.1e-09 Score=118.52 Aligned_cols=92 Identities=23% Similarity=0.349 Sum_probs=77.6
Q ss_pred cCCcccCCceeccCceEEEEEEeCCC-CEEEEEEcccCChhcHHHHHHHHHHHhcCC-CCcccceeE-EEEe------CC
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILPDG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVG-YCDE------EG 693 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g-~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g-~~~~------~~ 693 (728)
...++.+++|.+|+|+.||.+....+ ..||+|++-..++...+...+||++|++++ |+|||.+++ .... .-
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 34466778999999999999997655 999999998777777788999999999997 999999999 3322 13
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 004842 694 EQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
+.+|.||||++|.|-|++..+
T Consensus 116 EvllLmEyC~gg~Lvd~mn~R 136 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTR 136 (738)
T ss_pred EEEeehhhccCCcHHHHHHHH
Confidence 678999999999999999854
No 287
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.84 E-value=1.2e-08 Score=105.66 Aligned_cols=85 Identities=33% Similarity=0.620 Sum_probs=72.1
Q ss_pred CceeccCceEEEEEEeCC-CC--EEEEEEcccCC-hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILPD-GT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~-g~--~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
++||+|+||.||+|...+ +. .+|+|.+.... ....+.|.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999754 43 47899887532 33446799999999999 899999999999998999999999999
Q ss_pred CCHHHHHhcC
Q 004842 705 GTLRDQLSGI 714 (728)
Q Consensus 705 GsL~~~L~~~ 714 (728)
|+|.++++..
T Consensus 81 ~~L~~~i~~~ 90 (270)
T cd05047 81 GNLLDFLRKS 90 (270)
T ss_pred CcHHHHHHhc
Confidence 9999999864
No 288
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=98.84 E-value=1.1e-08 Score=107.50 Aligned_cols=92 Identities=28% Similarity=0.477 Sum_probs=78.0
Q ss_pred CCcccCCceeccCceEEEEEEeCC-----------------CCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccce
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD-----------------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSL 685 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-----------------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l 685 (728)
.+|...+.||+|+||.||++...+ +..||+|.+.... ....++|.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 457778999999999999987532 2458999987543 2345679999999999999999999
Q ss_pred eEEEEeCCeEEEEEecCCCCCHHHHHhcCC
Q 004842 686 VGYCDEEGEQMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 686 ~g~~~~~~~~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
++++..++..++|+||+++|+|.++++...
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 114 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHV 114 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcc
Confidence 999999899999999999999999997643
No 289
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=98.83 E-value=1e-08 Score=107.46 Aligned_cols=99 Identities=30% Similarity=0.461 Sum_probs=82.6
Q ss_pred cchHHHHhhcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEe
Q 004842 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (728)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 691 (728)
++.+++..++++|...+.||+|+||.||++.. .+++.+|+|.+..... ...++.+|+.++.++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 45566677788999999999999999999986 4588999999865422 235678899999998 89999999999875
Q ss_pred C-----CeEEEEEecCCCCCHHHHHhc
Q 004842 692 E-----GEQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 692 ~-----~~~~lV~Ey~~~GsL~~~L~~ 713 (728)
. +..++||||+++|+|.++++.
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~ 117 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKG 117 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHH
Confidence 4 358999999999999999863
No 290
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.83 E-value=9.3e-09 Score=105.54 Aligned_cols=85 Identities=34% Similarity=0.554 Sum_probs=71.4
Q ss_pred CceeccCceEEEEEEeCC----CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
++||+|+||.||+|.+.. +..||+|.+..... ...+++.+|+.++++++|+|||++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 468999999999998532 26899999976543 24567999999999999999999999876 4568999999999
Q ss_pred CCHHHHHhcCC
Q 004842 705 GTLRDQLSGIF 715 (728)
Q Consensus 705 GsL~~~L~~~~ 715 (728)
|+|.++++...
T Consensus 80 ~~L~~~l~~~~ 90 (257)
T cd05060 80 GPLLKYLKKRR 90 (257)
T ss_pred CcHHHHHHhCC
Confidence 99999998654
No 291
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=98.83 E-value=1.4e-08 Score=103.95 Aligned_cols=90 Identities=22% Similarity=0.309 Sum_probs=77.6
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|+..+.||+|+||.||++.. .+++.+|||.+.... ....+.+.+|++++++++|+||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 366778999999999999985 357899999986542 23346799999999999999999999999888999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
+++|+|.++++..
T Consensus 81 ~~~~~L~~~~~~~ 93 (256)
T cd08220 81 APGGTLAEYIQKR 93 (256)
T ss_pred CCCCCHHHHHHHh
Confidence 9999999999864
No 292
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.83 E-value=1e-08 Score=106.77 Aligned_cols=89 Identities=30% Similarity=0.517 Sum_probs=76.1
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
+|+..+.||+|++|.||+|+.. +|..||||.++.... ...+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4677889999999999999964 588999999875432 23456789999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
+ |+|.+++...
T Consensus 81 ~-~~l~~~~~~~ 91 (284)
T cd07836 81 D-KDLKKYMDTH 91 (284)
T ss_pred C-ccHHHHHHhc
Confidence 9 4899998754
No 293
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=98.83 E-value=9e-09 Score=105.44 Aligned_cols=89 Identities=21% Similarity=0.462 Sum_probs=76.8
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
|...+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 566788999999999999965 47889999986532 223457889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++++|.+++...
T Consensus 82 ~~~~L~~~~~~~ 93 (257)
T cd08225 82 DGGDLMKRINRQ 93 (257)
T ss_pred CCCcHHHHHHhc
Confidence 999999999764
No 294
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.83 E-value=9.9e-09 Score=106.77 Aligned_cols=91 Identities=31% Similarity=0.509 Sum_probs=75.2
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCC----EEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~----~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
.+|...++||+|+||.||+|.+ ++|. .||+|.+.... ....+++.+|+.++..++|+||++++|+|.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 4577789999999999999985 3444 48999987543 3335679999999999999999999999975 45789
Q ss_pred EEecCCCCCHHHHHhcCC
Q 004842 698 VYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~~ 715 (728)
+|||+++|+|.++++...
T Consensus 86 ~~~~~~~g~l~~~l~~~~ 103 (279)
T cd05109 86 VTQLMPYGCLLDYVRENK 103 (279)
T ss_pred EEEcCCCCCHHHHHhhcc
Confidence 999999999999998643
No 295
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.82 E-value=1.2e-08 Score=105.08 Aligned_cols=88 Identities=33% Similarity=0.527 Sum_probs=75.1
Q ss_pred CcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+|.....||+|+||.||+|...++..+|+|.+..... ..+.|.+|+.++++++|+|++++++++. .+..++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 4666788999999999999987777899999865432 3457999999999999999999999875 4668999999999
Q ss_pred CCHHHHHhcC
Q 004842 705 GTLRDQLSGI 714 (728)
Q Consensus 705 GsL~~~L~~~ 714 (728)
|+|.++++..
T Consensus 85 ~~L~~~~~~~ 94 (260)
T cd05069 85 GSLLDFLKEG 94 (260)
T ss_pred CCHHHHHhhC
Confidence 9999999764
No 296
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.82 E-value=9e-09 Score=109.20 Aligned_cols=91 Identities=23% Similarity=0.536 Sum_probs=76.1
Q ss_pred CCcccCCceeccCceEEEEEEeC--------CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcC-CCCcccceeEEEEeCC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 693 (728)
.+|...+.||+|+||.||+++.. ....||+|.++.... ....++.+|++++.++ +|||||+++++|...+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 45667899999999999999741 245799999875432 3345789999999999 6999999999999888
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 004842 694 EQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
..++||||+++|+|.+++...
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~ 112 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRAR 112 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhc
Confidence 999999999999999999764
No 297
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.82 E-value=9.8e-09 Score=112.22 Aligned_cols=85 Identities=19% Similarity=0.167 Sum_probs=73.3
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
..|...+.||+|+||.||++.. ..++.||+|.... +.+.+|++++++++|||||++++++......++|+||+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 4577889999999999999984 4588999997532 35779999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCC
Q 004842 703 SNGTLRDQLSGIF 715 (728)
Q Consensus 703 ~~GsL~~~L~~~~ 715 (728)
. |+|.+++..+.
T Consensus 166 ~-~~L~~~l~~~~ 177 (391)
T PHA03212 166 K-TDLYCYLAAKR 177 (391)
T ss_pred C-CCHHHHHHhcC
Confidence 6 79999987654
No 298
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.82 E-value=1.5e-08 Score=105.15 Aligned_cols=90 Identities=26% Similarity=0.436 Sum_probs=76.8
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCC---CCcccceeEEEEeCCeEEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~ 699 (728)
.|+..+.||+|+||.||+|.. .++..||+|.+.... ....+++.+|++++++++ |||++++++++...+..++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 356678899999999999995 468999999986532 233457889999999997 999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 004842 700 EFMSNGTLRDQLSGI 714 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~ 714 (728)
||+++|+|.++++..
T Consensus 82 e~~~~~~L~~~~~~~ 96 (277)
T cd06917 82 EYAEGGSVRTLMKAG 96 (277)
T ss_pred ecCCCCcHHHHHHcc
Confidence 999999999998764
No 299
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.82 E-value=7.7e-09 Score=107.69 Aligned_cols=91 Identities=29% Similarity=0.413 Sum_probs=72.8
Q ss_pred CcccCCceeccCceEEEEEEeC-CCC----EEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
+|...+.||+|+||.||+|.+. ++. .||+|.+..... ...+++..|+..+++++|||||+++|++. ....++|
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEE
Confidence 4666789999999999999863 344 478888754322 23457888999999999999999999985 4567899
Q ss_pred EecCCCCCHHHHHhcCCC
Q 004842 699 YEFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~~ 716 (728)
+||+++|+|.++++....
T Consensus 87 ~e~~~~gsL~~~l~~~~~ 104 (279)
T cd05111 87 TQLSPLGSLLDHVRQHRD 104 (279)
T ss_pred EEeCCCCcHHHHHHhccc
Confidence 999999999999986543
No 300
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.82 E-value=1.3e-08 Score=106.32 Aligned_cols=89 Identities=25% Similarity=0.361 Sum_probs=77.4
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
|...+.||+|++|.||++.. .+++.||+|++........+.+.+|+.+++.++|+||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44457899999999999985 46889999998755444456789999999999999999999999999999999999999
Q ss_pred CCHHHHHhcC
Q 004842 705 GTLRDQLSGI 714 (728)
Q Consensus 705 GsL~~~L~~~ 714 (728)
++|.+++...
T Consensus 101 ~~L~~~~~~~ 110 (285)
T cd06648 101 GALTDIVTHT 110 (285)
T ss_pred CCHHHHHHhC
Confidence 9999999763
No 301
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=98.82 E-value=1.9e-08 Score=103.54 Aligned_cols=90 Identities=27% Similarity=0.342 Sum_probs=78.7
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
+|+..+.||.|+||.||+|... ++..+|+|++..... ...+.+.+|++.++.++|+||+++++.+...+..++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 5777889999999999999954 578999999865332 24567999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++|+|.++++..
T Consensus 82 ~~~~l~~~~~~~ 93 (267)
T cd06610 82 SGGSLLDIMKSS 93 (267)
T ss_pred CCCcHHHHHHHh
Confidence 999999999763
No 302
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.82 E-value=3.4e-09 Score=112.51 Aligned_cols=92 Identities=23% Similarity=0.415 Sum_probs=77.0
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCe-EEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE-QMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-~~lV~ 699 (728)
++|...+++|+|+||.++....+ ++..+++|.+.-... ..++.-..|+.++++++|||||.+.+.+..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 34666789999999999877643 477899999875433 234468899999999999999999999988887 99999
Q ss_pred ecCCCCCHHHHHhcCC
Q 004842 700 EFMSNGTLRDQLSGIF 715 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~ 715 (728)
||++||++.+.|...+
T Consensus 84 ~Y~eGg~l~~~i~~~k 99 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK 99 (426)
T ss_pred eecCCCCHHHHHHHHh
Confidence 9999999999998765
No 303
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.81 E-value=6.5e-09 Score=107.38 Aligned_cols=84 Identities=37% Similarity=0.641 Sum_probs=72.0
Q ss_pred CceeccCceEEEEEEeCC-------CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 630 TQIGQGGYGKVYKGILPD-------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~-------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+.||+|+||.||+|+..+ +..+|||.+..... ....+|.+|+.++++++||||++++|+|...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998643 25799998865432 3346799999999999999999999999988899999999
Q ss_pred CCCCCHHHHHhc
Q 004842 702 MSNGTLRDQLSG 713 (728)
Q Consensus 702 ~~~GsL~~~L~~ 713 (728)
+++|+|.++++.
T Consensus 81 ~~~~~L~~~l~~ 92 (269)
T cd05044 81 MEGGDLLSYLRD 92 (269)
T ss_pred cCCCcHHHHHHH
Confidence 999999999975
No 304
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=98.81 E-value=1.2e-08 Score=105.97 Aligned_cols=84 Identities=27% Similarity=0.471 Sum_probs=71.9
Q ss_pred eeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCH
Q 004842 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (728)
Q Consensus 632 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (728)
||+|+||+||++... +|+.||+|.+..... ...+.|.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999854 588999999865322 2234678999999999999999999999988999999999999999
Q ss_pred HHHHhcCC
Q 004842 708 RDQLSGIF 715 (728)
Q Consensus 708 ~~~L~~~~ 715 (728)
.+++....
T Consensus 81 ~~~l~~~~ 88 (277)
T cd05577 81 KYHIYNVG 88 (277)
T ss_pred HHHHHHcC
Confidence 99998654
No 305
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.81 E-value=2e-08 Score=102.14 Aligned_cols=90 Identities=34% Similarity=0.543 Sum_probs=80.2
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
+|+..+.||+|++|.||++... ++..+++|++........+++.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3566788999999999999975 688999999987655455789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhcC
Q 004842 704 NGTLRDQLSGI 714 (728)
Q Consensus 704 ~GsL~~~L~~~ 714 (728)
+++|.+++...
T Consensus 81 ~~~L~~~~~~~ 91 (253)
T cd05122 81 GGSLKDLLKST 91 (253)
T ss_pred CCcHHHHHhhc
Confidence 99999999875
No 306
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.81 E-value=1.2e-08 Score=106.84 Aligned_cols=92 Identities=26% Similarity=0.390 Sum_probs=76.7
Q ss_pred hcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
++.+|...+.||+|+||.||+|.. .+|..||+|++..... .....+.+|+.++++++|+||+++.+++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 356788889999999999999985 4588999999865432 22346789999999999999999999999988999999
Q ss_pred ecCCCCCHHHHHhcC
Q 004842 700 EFMSNGTLRDQLSGI 714 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~ 714 (728)
||++ |++.+++...
T Consensus 83 e~~~-~~l~~~~~~~ 96 (291)
T cd07870 83 EYMH-TDLAQYMIQH 96 (291)
T ss_pred eccc-CCHHHHHHhC
Confidence 9996 7888877643
No 307
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.81 E-value=1.9e-08 Score=103.66 Aligned_cols=92 Identities=26% Similarity=0.425 Sum_probs=76.0
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccC-----ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeC--CeE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 695 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 695 (728)
.+|...+.||+|+||.||+|.. .++..||+|.+... .....+.|.+|++++++++|+||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4678889999999999999985 45889999987532 122335789999999999999999999998654 457
Q ss_pred EEEEecCCCCCHHHHHhcCC
Q 004842 696 MLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~~ 715 (728)
++|+||+++|+|.+++....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~ 101 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG 101 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC
Confidence 89999999999999997643
No 308
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.81 E-value=1.9e-08 Score=102.78 Aligned_cols=90 Identities=27% Similarity=0.437 Sum_probs=78.7
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeC--CeEEEEEe
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVYE 700 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~E 700 (728)
|...+.||+|++|.||+|... ++..|++|++..... ...+.+.+|++++++++|+||+++++++... +..++|+|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 566789999999999999975 588999999876442 3456799999999999999999999999887 88999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
|+++++|.+++....
T Consensus 82 ~~~~~~L~~~~~~~~ 96 (260)
T cd06606 82 YVSGGSLSSLLKKFG 96 (260)
T ss_pred ecCCCcHHHHHHHcC
Confidence 999999999998654
No 309
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.80 E-value=8.1e-09 Score=116.28 Aligned_cols=94 Identities=19% Similarity=0.220 Sum_probs=76.6
Q ss_pred hhcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC----
Q 004842 621 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG---- 693 (728)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~---- 693 (728)
....+|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+..+..++|+|||++...+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3446788889999999999999984 568999999986532 233456889999999999999999988765432
Q ss_pred ----eEEEEEecCCCCCHHHHHhcC
Q 004842 694 ----EQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 694 ----~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
..++||||+++|+|.++|+.+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~ 133 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSR 133 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHh
Confidence 368999999999999999753
No 310
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.80 E-value=1.2e-08 Score=107.93 Aligned_cols=89 Identities=28% Similarity=0.431 Sum_probs=74.9
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
..|...+.||+|+||.||+|+.. +|+.||+|.+..... ...+++.+|++++++++||||+++.|+|...+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 44777789999999999999864 588999999864322 23357899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 004842 700 EFMSNGTLRDQLSG 713 (728)
Q Consensus 700 Ey~~~GsL~~~L~~ 713 (728)
||++ |++.+++..
T Consensus 95 e~~~-g~l~~~~~~ 107 (307)
T cd06607 95 EYCL-GSASDILEV 107 (307)
T ss_pred HhhC-CCHHHHHHH
Confidence 9998 678787764
No 311
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=98.80 E-value=1.7e-08 Score=105.20 Aligned_cols=88 Identities=33% Similarity=0.526 Sum_probs=75.1
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|...+.||+|+||.||+|+.. ++..||||.++... ....+.+.+|+.++.+++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 3566788999999999999864 58899999986432 22345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhc
Q 004842 702 MSNGTLRDQLSG 713 (728)
Q Consensus 702 ~~~GsL~~~L~~ 713 (728)
++ |+|.++++.
T Consensus 81 ~~-~~l~~~~~~ 91 (285)
T cd07861 81 LS-MDLKKYLDS 91 (285)
T ss_pred CC-CCHHHHHhc
Confidence 98 699999875
No 312
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.80 E-value=2.2e-09 Score=126.22 Aligned_cols=127 Identities=24% Similarity=0.290 Sum_probs=78.6
Q ss_pred ceeEEECCCCCCccccCccccCCCCCCEEEccCCC--CccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEE
Q 004842 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNK--ISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (728)
Q Consensus 83 ~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~--l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (728)
.++...+.++.+.. ++... ..++|++|-+..|. +.......|..++.|++|||++|.--+.+|+.++.|-+|++|+
T Consensus 524 ~~rr~s~~~~~~~~-~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIEH-IAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchhh-ccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 45555555555432 12222 22356777776665 3433333466677777777777666667777777777777777
Q ss_pred eeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCC
Q 004842 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 212 (728)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 212 (728)
|++..+. .+|..+.+|.+|.+|++..+.....+|.....|.+|++|.+..-
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeecc
Confidence 7777776 56777777777777777766654445555556777777766554
No 313
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.80 E-value=1.9e-08 Score=106.72 Aligned_cols=90 Identities=27% Similarity=0.363 Sum_probs=78.4
Q ss_pred CcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChh---cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+|+..+.||+|+||.||+|...+ +..||+|.+...... ..+.+.+|++++.+++|+||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 57777899999999999998654 899999999754322 34578999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
|+++|+|.+++...
T Consensus 82 ~~~~~~L~~~~~~~ 95 (316)
T cd05574 82 YCPGGELFRLLQRQ 95 (316)
T ss_pred ecCCCCHHHHHHhC
Confidence 99999999999753
No 314
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.80 E-value=1.8e-08 Score=104.20 Aligned_cols=86 Identities=27% Similarity=0.499 Sum_probs=69.9
Q ss_pred ccCCceeccCceEEEEEEeCC-CC--EEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeC------CeE
Q 004842 627 NSSTQIGQGGYGKVYKGILPD-GT--VVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------GEQ 695 (728)
Q Consensus 627 ~~~~~iG~G~fg~Vy~~~~~~-g~--~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~ 695 (728)
...++||+|+||.||+|...+ +. .||||.++... ....++|.+|++++++++|+||++++|+|... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 346789999999999999754 33 58999886542 33346799999999999999999999998532 246
Q ss_pred EEEEecCCCCCHHHHHh
Q 004842 696 MLVYEFMSNGTLRDQLS 712 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (728)
++|+|||++|+|.+++.
T Consensus 82 ~~v~e~~~~~~l~~~~~ 98 (272)
T cd05075 82 VVILPFMKHGDLHSFLL 98 (272)
T ss_pred EEEEEeCCCCcHHHHHH
Confidence 89999999999999985
No 315
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.79 E-value=9.5e-09 Score=105.39 Aligned_cols=87 Identities=32% Similarity=0.573 Sum_probs=74.8
Q ss_pred ccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChhcH--HHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 627 NSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 627 ~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~--~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
+..+.||+|+||.||++.... ++.||+|.+........ ....+|+.++.+++|+||+++++++...+..++||||++
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~ 81 (260)
T PF00069_consen 2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCP 81 (260)
T ss_dssp EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEET
T ss_pred EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccc
Confidence 456789999999999999654 66899999987654332 234669999999999999999999999999999999999
Q ss_pred CCCHHHHHhc
Q 004842 704 NGTLRDQLSG 713 (728)
Q Consensus 704 ~GsL~~~L~~ 713 (728)
+|+|.+++..
T Consensus 82 ~~~L~~~l~~ 91 (260)
T PF00069_consen 82 GGSLQDYLQK 91 (260)
T ss_dssp TEBHHHHHHH
T ss_pred cccccccccc
Confidence 9999999983
No 316
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.79 E-value=2e-08 Score=102.47 Aligned_cols=89 Identities=29% Similarity=0.581 Sum_probs=78.1
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
|+..+.||+|++|.||++... +++.||+|.+..... ...+.+.+|++++.+++|+|++++++++...+..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 566789999999999999864 578999999976543 33467999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++++|.+++...
T Consensus 82 ~~~~L~~~~~~~ 93 (254)
T cd06627 82 ENGSLRQIIKKF 93 (254)
T ss_pred CCCcHHHHHHhc
Confidence 999999999765
No 317
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.79 E-value=1.4e-08 Score=108.62 Aligned_cols=85 Identities=24% Similarity=0.269 Sum_probs=68.7
Q ss_pred eeccCceEEEEEEeC-CCCEEEEEEcccCChh---cHHHHHHHHHHHhcC---CCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRL---HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 632 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
||+|+||.||+|... +|+.||||++...... ....+..|..++.+. +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999854 5899999998643211 223456677777665 799999999999999999999999999
Q ss_pred CCHHHHHhcCCC
Q 004842 705 GTLRDQLSGIFS 716 (728)
Q Consensus 705 GsL~~~L~~~~~ 716 (728)
|+|.+++.....
T Consensus 81 g~L~~~l~~~~~ 92 (330)
T cd05586 81 GELFWHLQKEGR 92 (330)
T ss_pred ChHHHHHHhcCC
Confidence 999999976543
No 318
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.78 E-value=1e-08 Score=110.00 Aligned_cols=91 Identities=31% Similarity=0.543 Sum_probs=74.5
Q ss_pred CCcccCCceeccCceEEEEEEeC------CCCEEEEEEcccCCh-hcHHHHHHHHHHHhcC-CCCcccceeEEEEe-CCe
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE-EGE 694 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~-~~~ 694 (728)
+.|...+.||+|+||.||+|... .++.||+|+++.... ...+.+.+|+.++.++ +|+||++++++|.. +..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 35777899999999999999632 246899999975432 2345688999999999 89999999998865 456
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 004842 695 QMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~ 714 (728)
.++||||+++|+|.++++..
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~ 106 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSK 106 (337)
T ss_pred EEEEEecCCCCCHHHHHHhc
Confidence 88999999999999999754
No 319
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.78 E-value=2.3e-08 Score=103.28 Aligned_cols=89 Identities=18% Similarity=0.362 Sum_probs=73.5
Q ss_pred CcccCCceeccCceEEEEEEeCC--CCEEEEEEcccCC----------hhcHHHHHHHHHHHhc-CCCCcccceeEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGS----------LQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDE 691 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~--g~~vAvK~l~~~~----------~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~ 691 (728)
+|+..+.||+|+||.||+|.... ++.+|||.+.... ....+++.+|+.++.+ ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36677889999999999999755 6789999875321 1223467889988875 799999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhc
Q 004842 692 EGEQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 692 ~~~~~lV~Ey~~~GsL~~~L~~ 713 (728)
.+..++||||+++|+|.+++..
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~ 102 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNS 102 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHH
Confidence 9999999999999999998853
No 320
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=98.78 E-value=1.5e-08 Score=118.80 Aligned_cols=92 Identities=17% Similarity=0.339 Sum_probs=76.9
Q ss_pred hcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEe--CCeEE
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQM 696 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~ 696 (728)
...+|...+.||+|+||.||++... .+..||+|.+.... ......|..|+.++.+++|||||++++++.. .+..|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 3457888899999999999999854 47789999986432 2334579999999999999999999998854 35689
Q ss_pred EEEecCCCCCHHHHHhc
Q 004842 697 LVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~ 713 (728)
+||||+++|+|.++|..
T Consensus 91 IVMEY~~gGSL~~lL~k 107 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQK 107 (1021)
T ss_pred EEEeCCCCCcHHHHHHH
Confidence 99999999999999975
No 321
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.78 E-value=1.4e-08 Score=108.64 Aligned_cols=90 Identities=23% Similarity=0.510 Sum_probs=75.6
Q ss_pred CcccCCceeccCceEEEEEEeC--------CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 694 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 694 (728)
.|...+.||+|+||.||++... .+..||+|.++... ....++|.+|++++.++ +|+||++++++|...+.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 4677789999999999999742 12368999887543 22346799999999999 89999999999999899
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 004842 695 QMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~ 714 (728)
.++||||+++|+|.+++...
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~ 112 (334)
T cd05100 93 LYVLVEYASKGNLREYLRAR 112 (334)
T ss_pred eEEEEecCCCCcHHHHHHhc
Confidence 99999999999999999753
No 322
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.78 E-value=2.3e-08 Score=106.46 Aligned_cols=87 Identities=18% Similarity=0.194 Sum_probs=67.9
Q ss_pred HhhcCCcccCCceeccCceEEEEEEeC--CCCEEEEEEcccC-----ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeC
Q 004842 620 ALATNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (728)
Q Consensus 620 ~~~~~~~~~~~~iG~G~fg~Vy~~~~~--~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 692 (728)
.....+|...+.||+|+||+||+|... +++.||||++... .....+.|.+|++++++++|+|+|+.+.. .
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~ 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---T 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---c
Confidence 334567889999999999999999864 5778899987532 11224569999999999999999964322 2
Q ss_pred CeEEEEEecCCCCCHHH
Q 004842 693 GEQMLVYEFMSNGTLRD 709 (728)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~ 709 (728)
+..++||||+++++|..
T Consensus 91 ~~~~LVmE~~~G~~L~~ 107 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHL 107 (365)
T ss_pred CCcEEEEEccCCCCHHH
Confidence 46799999999999973
No 323
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.77 E-value=1.9e-08 Score=103.99 Aligned_cols=91 Identities=31% Similarity=0.459 Sum_probs=77.8
Q ss_pred hcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCC------
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG------ 693 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~------ 693 (728)
++++|+..+.||+|+||.||+|..+ +++.+|+|.+..... ..++|.+|+.+++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 5677888999999999999999964 578999999876433 346799999999999 7999999999997644
Q ss_pred eEEEEEecCCCCCHHHHHhc
Q 004842 694 EQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~~ 713 (728)
..++||||+++|+|.++++.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~ 102 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKG 102 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHH
Confidence 48999999999999999875
No 324
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.76 E-value=1.4e-08 Score=104.23 Aligned_cols=84 Identities=25% Similarity=0.399 Sum_probs=73.4
Q ss_pred eeccCceEEEEEEeCC-CCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCH
Q 004842 632 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (728)
Q Consensus 632 iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (728)
||+|+||.||+++..+ |+.||+|.+..... ...+.+.+|++++.+++|+||+++++++...+..++||||+++|+|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999764 89999999865433 2345789999999999999999999999999999999999999999
Q ss_pred HHHHhcCC
Q 004842 708 RDQLSGIF 715 (728)
Q Consensus 708 ~~~L~~~~ 715 (728)
.++++...
T Consensus 81 ~~~l~~~~ 88 (265)
T cd05579 81 ASLLENVG 88 (265)
T ss_pred HHHHHHcC
Confidence 99998644
No 325
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.76 E-value=2.6e-08 Score=105.77 Aligned_cols=88 Identities=28% Similarity=0.442 Sum_probs=73.9
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
|...+.||+|+||.||++... ++..||+|.+..... ...+++.+|++++++++|+|+|++++++..++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 566788999999999999854 588999999864322 2234788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
++ |+|.+++...
T Consensus 107 ~~-g~l~~~~~~~ 118 (317)
T cd06635 107 CL-GSASDLLEVH 118 (317)
T ss_pred CC-CCHHHHHHHh
Confidence 97 5888887643
No 326
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.76 E-value=1.7e-08 Score=105.40 Aligned_cols=90 Identities=28% Similarity=0.429 Sum_probs=76.2
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|+..+.||+|+||.||+|..+ +++.||||.++... ....+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 4677789999999999999865 47899999986532 22346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
++++.+..+....
T Consensus 82 ~~~~~l~~~~~~~ 94 (288)
T cd07833 82 VERTLLELLEASP 94 (288)
T ss_pred CCCCHHHHHHhcC
Confidence 9998777766543
No 327
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.76 E-value=2.9e-08 Score=101.83 Aligned_cols=88 Identities=34% Similarity=0.526 Sum_probs=74.9
Q ss_pred CcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEe-CCeEEEEEecCC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQMLVYEFMS 703 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~Ey~~ 703 (728)
+|...+.||+|+||.||++..+ |..||+|.++... ..+.|.+|+.++++++|+|+++++|++.. .+..++||||++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 5677789999999999999874 7889999986543 24579999999999999999999998754 457899999999
Q ss_pred CCCHHHHHhcCC
Q 004842 704 NGTLRDQLSGIF 715 (728)
Q Consensus 704 ~GsL~~~L~~~~ 715 (728)
+|+|.++++...
T Consensus 84 ~~~L~~~~~~~~ 95 (256)
T cd05082 84 KGSLVDYLRSRG 95 (256)
T ss_pred CCcHHHHHHhcC
Confidence 999999998643
No 328
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.76 E-value=2e-08 Score=104.71 Aligned_cols=89 Identities=33% Similarity=0.527 Sum_probs=75.7
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4677889999999999999864 588999999865322 2235789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
++ ++|.++++..
T Consensus 81 ~~-~~l~~~~~~~ 92 (284)
T cd07860 81 LH-QDLKKFMDAS 92 (284)
T ss_pred cc-cCHHHHHHhC
Confidence 96 6899998753
No 329
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.75 E-value=2.4e-08 Score=103.93 Aligned_cols=88 Identities=25% Similarity=0.375 Sum_probs=72.1
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh-hcHHHHHHHHHH-HhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|+..+.||+|+||.||++... +|+.||+|+++.... ....++..|+.. ++..+|+|||++++++...+..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 5777889999999999999864 589999999875432 234456667765 5667999999999999999999999999
Q ss_pred CCCCCHHHHHhc
Q 004842 702 MSNGTLRDQLSG 713 (728)
Q Consensus 702 ~~~GsL~~~L~~ 713 (728)
|+ |+|.++++.
T Consensus 82 ~~-~~l~~~l~~ 92 (283)
T cd06617 82 MD-TSLDKFYKK 92 (283)
T ss_pred hc-ccHHHHHHH
Confidence 97 688888864
No 330
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.75 E-value=2e-08 Score=104.70 Aligned_cols=88 Identities=30% Similarity=0.459 Sum_probs=74.6
Q ss_pred cccCCceeccCceEEEEEEeCC------CCEEEEEEcccCChh-cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEE
Q 004842 626 FNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 698 (728)
|...+.||+|+||.||+|...+ +..||||++...... ..+.|.+|+.++..++|||||++++++...+..+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 4455789999999999998532 468999999754332 235689999999999999999999999998999999
Q ss_pred EecCCCCCHHHHHhc
Q 004842 699 YEFMSNGTLRDQLSG 713 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~ 713 (728)
+||+++++|.+++..
T Consensus 87 ~e~~~~~~l~~~l~~ 101 (283)
T cd05091 87 FSYCSHSDLHEFLVM 101 (283)
T ss_pred EEcCCCCcHHHHHHh
Confidence 999999999999963
No 331
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=98.75 E-value=2.7e-08 Score=102.17 Aligned_cols=88 Identities=23% Similarity=0.424 Sum_probs=73.6
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEe--CCeEEEEEe
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVYE 700 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~E 700 (728)
|+..+.+|+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.++++++|+||+++++++.. ....++|||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 56678899999999999985 457899999986532 2334578999999999999999999998864 346799999
Q ss_pred cCCCCCHHHHHhc
Q 004842 701 FMSNGTLRDQLSG 713 (728)
Q Consensus 701 y~~~GsL~~~L~~ 713 (728)
|+++|+|.+++..
T Consensus 82 ~~~~~~L~~~l~~ 94 (265)
T cd08217 82 YCEGGDLAQLIQK 94 (265)
T ss_pred hccCCCHHHHHHH
Confidence 9999999999975
No 332
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.74 E-value=1.6e-08 Score=116.30 Aligned_cols=97 Identities=28% Similarity=0.519 Sum_probs=80.6
Q ss_pred HHhhcCCcccCCceeccCceEEEEEEeC----C----CCEEEEEEcccCCh-hcHHHHHHHHHHHhcC-CCCcccceeEE
Q 004842 619 MALATNNFNSSTQIGQGGYGKVYKGILP----D----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGY 688 (728)
Q Consensus 619 ~~~~~~~~~~~~~iG~G~fg~Vy~~~~~----~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~ 688 (728)
++...+++...+.+|+|.||.|++|.+. . ...||||+++.... .+.+++..|+++|+.+ +|+|||.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 3344445555569999999999999843 1 34799999986533 3456899999999999 79999999999
Q ss_pred EEeCCeEEEEEecCCCCCHHHHHhcCC
Q 004842 689 CDEEGEQMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 689 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
|...+..++|+||+++|+|.+||+.++
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r 397 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKR 397 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhcc
Confidence 999999999999999999999999866
No 333
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.74 E-value=2.3e-08 Score=104.87 Aligned_cols=92 Identities=23% Similarity=0.377 Sum_probs=76.3
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChh--cHHHHHHHHHHHhcCCCCcccceeEEEEeC--CeEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLV 698 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV 698 (728)
++|+..+.||+|+||.||+|..+ +++.+|+|.++..... ....+.+|+.++.+++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 35777789999999999999975 5889999999754322 224578899999999999999999999877 789999
Q ss_pred EecCCCCCHHHHHhcCCC
Q 004842 699 YEFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~~ 716 (728)
|||++ ++|.+++.....
T Consensus 85 ~e~~~-~~L~~~~~~~~~ 101 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ 101 (293)
T ss_pred ehhcC-cCHHHHHHhccC
Confidence 99998 599999876543
No 334
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=98.74 E-value=1.4e-08 Score=106.85 Aligned_cols=82 Identities=27% Similarity=0.456 Sum_probs=69.6
Q ss_pred CCceeccCceEEEEEEe-CCCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCC
Q 004842 629 STQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~G 705 (728)
++++|+|.||+||-|+. +.|+.||||.+.+.+. ..+....+|+.++.+++||.||.+...|.+.+..++|||-+. |
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-G 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-c
Confidence 57899999999999985 4699999999976432 334578999999999999999999999999999999999885 5
Q ss_pred CHHHHH
Q 004842 706 TLRDQL 711 (728)
Q Consensus 706 sL~~~L 711 (728)
|..+.+
T Consensus 648 DMLEMI 653 (888)
T KOG4236|consen 648 DMLEMI 653 (888)
T ss_pred hHHHHH
Confidence 655544
No 335
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.74 E-value=2e-08 Score=107.23 Aligned_cols=96 Identities=23% Similarity=0.281 Sum_probs=78.0
Q ss_pred HHHhhcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEe-CC
Q 004842 618 EMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EG 693 (728)
Q Consensus 618 ~~~~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~ 693 (728)
++...+++|+..+.||+|+||.||++.. .+++.||||++.... ....+.+.+|++++.+++|||||++.+++.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 3445677898999999999999999984 468999999885421 2234578899999999999999999999865 55
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 004842 694 EQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
..++|+||+ +++|.++++..
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~~ 103 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTSR 103 (328)
T ss_pred cEEEEeehh-ccCHHHHHhcC
Confidence 789999999 46899988753
No 336
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=98.73 E-value=2.4e-08 Score=102.28 Aligned_cols=86 Identities=34% Similarity=0.526 Sum_probs=73.6
Q ss_pred CcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+|...+.||+|+||.||+|.. .++.||+|.++... ..+.|.+|+.++++++|+|++++++++.. +..++||||+++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~~ 82 (254)
T cd05083 7 KLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSK 82 (254)
T ss_pred HceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCCC
Confidence 466778999999999999985 67889999986542 23578999999999999999999999865 457999999999
Q ss_pred CCHHHHHhcC
Q 004842 705 GTLRDQLSGI 714 (728)
Q Consensus 705 GsL~~~L~~~ 714 (728)
|+|.+++...
T Consensus 83 ~~L~~~l~~~ 92 (254)
T cd05083 83 GNLVNFLRTR 92 (254)
T ss_pred CCHHHHHHhc
Confidence 9999999754
No 337
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.73 E-value=4e-08 Score=103.07 Aligned_cols=90 Identities=24% Similarity=0.437 Sum_probs=76.0
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
++|+..+.||+|++|.||+|... +|+.||+|.+..... ...+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 35777889999999999999864 588999999865322 223578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
|++ ++|.+++...
T Consensus 82 ~~~-~~l~~~~~~~ 94 (294)
T PLN00009 82 YLD-LDLKKHMDSS 94 (294)
T ss_pred ccc-ccHHHHHHhC
Confidence 996 5888888653
No 338
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.73 E-value=2e-08 Score=105.97 Aligned_cols=91 Identities=31% Similarity=0.524 Sum_probs=73.8
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCC----EEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
.+|...+.||+|+||.||+|... +|. .||+|.+..... ....+|.+|+.++++++|+||++++|+|... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 45667789999999999999853 343 579998875432 2334789999999999999999999999754 5679
Q ss_pred EEecCCCCCHHHHHhcCC
Q 004842 698 VYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~~ 715 (728)
|+||+++|+|.+++....
T Consensus 86 v~e~~~~g~l~~~~~~~~ 103 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHK 103 (303)
T ss_pred eehhcCCCCHHHHHHhcc
Confidence 999999999999998654
No 339
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.73 E-value=1.1e-08 Score=111.69 Aligned_cols=102 Identities=21% Similarity=0.376 Sum_probs=78.8
Q ss_pred hcCCcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChhc---HHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEE
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 696 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 696 (728)
...+|....++|+|.||+|+.++++. ++.+|||++++...-. .+..+.|.+++.-. +||.++.+++++.+.+.++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 34578888999999999999999754 7899999998764432 34567787777666 6999999999999999999
Q ss_pred EEEecCCCCCHHHHHhcCCCccccccccc
Q 004842 697 LVYEFMSNGTLRDQLSGIFSVIRHSGICF 725 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~ 725 (728)
.||||+.+||+..+.+. ...++.+++|
T Consensus 446 fvmey~~Ggdm~~~~~~--~~F~e~rarf 472 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIHT--DVFSEPRARF 472 (694)
T ss_pred EEEEecCCCcEEEEEec--ccccHHHHHH
Confidence 99999999995444442 3344444433
No 340
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.73 E-value=1.7e-08 Score=104.77 Aligned_cols=91 Identities=22% Similarity=0.280 Sum_probs=78.6
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCC-CCcccceeEEEEeCCeEEEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~ 699 (728)
+|...+.||+|+||.||++... +|+.||+|.+.... ....+.+.+|++++.+++ |+||+++++++...+..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 5677789999999999999964 68999999986532 233457899999999998 999999999999899999999
Q ss_pred ecCCCCCHHHHHhcCC
Q 004842 700 EFMSNGTLRDQLSGIF 715 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~ 715 (728)
||+++|+|.+++....
T Consensus 82 e~~~~~~L~~~l~~~~ 97 (280)
T cd05581 82 EYAPNGELLQYIRKYG 97 (280)
T ss_pred cCCCCCcHHHHHHHcC
Confidence 9999999999998653
No 341
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.73 E-value=2.6e-08 Score=107.83 Aligned_cols=90 Identities=24% Similarity=0.335 Sum_probs=72.7
Q ss_pred cCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC------
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------ 693 (728)
..+|...+.||+|+||.||++.. .+|..||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 46788889999999999999985 45889999998643 2233457889999999999999999999986543
Q ss_pred eEEEEEecCCCCCHHHHHhc
Q 004842 694 EQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~~ 713 (728)
..++||||+++ +|.++++.
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~ 118 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIHM 118 (359)
T ss_pred eeEEEEeCCCc-CHHHHHhc
Confidence 47999999985 67776654
No 342
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.72 E-value=9.7e-09 Score=107.85 Aligned_cols=90 Identities=22% Similarity=0.319 Sum_probs=77.0
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhc--HHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
-|+.++.||+|.|..|-.+.. =.|..||||++.+..... ......|++.|+-++|||||+|+.+...+..+|||.|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 355668899999999988862 369999999998754332 34578999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
=++|||+|||-+.
T Consensus 99 GD~GDl~DyImKH 111 (864)
T KOG4717|consen 99 GDGGDLFDYIMKH 111 (864)
T ss_pred cCCchHHHHHHhh
Confidence 9999999999764
No 343
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.72 E-value=1.6e-09 Score=116.11 Aligned_cols=97 Identities=24% Similarity=0.388 Sum_probs=81.5
Q ss_pred CceeccCceEEEEEEeCC-CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCHH
Q 004842 630 TQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL~ 708 (728)
-.+|.|+||.|||+.-++ +-..|.|.+........++|+-|+++++..+||+||+|++.|..++.+|++.|||++|-.+
T Consensus 38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVD 117 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVD 117 (1187)
T ss_pred hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHh
Confidence 457899999999998665 4456788887766666779999999999999999999999998899999999999999999
Q ss_pred HHHhcCCCcccccccccc
Q 004842 709 DQLSGIFSVIRHSGICFF 726 (728)
Q Consensus 709 ~~L~~~~~~~~~~~~~~~ 726 (728)
..+-.-....++..|+|+
T Consensus 118 aimlEL~r~LtE~QIqvv 135 (1187)
T KOG0579|consen 118 AIMLELGRVLTEDQIQVV 135 (1187)
T ss_pred HHHHHhccccchHHHHHH
Confidence 988766666666655554
No 344
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.72 E-value=3.5e-08 Score=102.81 Aligned_cols=100 Identities=28% Similarity=0.477 Sum_probs=81.9
Q ss_pred cchHHHHhhcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEe
Q 004842 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (728)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 691 (728)
.++.++..+.+.|+..+.||+|+||.||+|.. .+++.||+|.+.... ....++..|+.++.++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 35556666777888889999999999999996 458899999986543 2345688999999998 79999999999853
Q ss_pred ------CCeEEEEEecCCCCCHHHHHhcC
Q 004842 692 ------EGEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 692 ------~~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
....++||||+++|+|.+++...
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~ 113 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNT 113 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHc
Confidence 45789999999999999999753
No 345
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.71 E-value=9.4e-09 Score=79.96 Aligned_cols=59 Identities=32% Similarity=0.475 Sum_probs=31.6
Q ss_pred CCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccC
Q 004842 107 YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY 165 (728)
Q Consensus 107 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 165 (728)
+|++|++++|+++...+..|.++++|++|++++|.++...|+.|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45555555555554444455555555555555555554444555555555555555554
No 346
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.71 E-value=3.7e-08 Score=102.59 Aligned_cols=88 Identities=31% Similarity=0.510 Sum_probs=74.7
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeC--CeEEEEEe
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVYE 700 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~E 700 (728)
|+..+.||+|+||.||+|... +|+.+|+|++.... ....+++.+|++++++++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 345678999999999999965 48899999997653 22345789999999999999999999999887 78999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
|+++ +|.+++...
T Consensus 81 ~~~~-~l~~~~~~~ 93 (287)
T cd07840 81 YMDH-DLTGLLDSP 93 (287)
T ss_pred cccc-cHHHHHhcc
Confidence 9985 899998765
No 347
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.71 E-value=6.5e-08 Score=98.86 Aligned_cols=90 Identities=26% Similarity=0.514 Sum_probs=78.4
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|...+.||+|+||.||++... ++..||+|++..... ...+++.+|++++++++|+|++++.+.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 3566788999999999999964 588999999976433 3456789999999999999999999999888999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
+++++|.+++...
T Consensus 81 ~~~~~L~~~l~~~ 93 (258)
T cd08215 81 ADGGDLSQKIKKQ 93 (258)
T ss_pred cCCCcHHHHHHHh
Confidence 9999999999864
No 348
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.70 E-value=3.7e-08 Score=103.71 Aligned_cols=92 Identities=32% Similarity=0.485 Sum_probs=75.4
Q ss_pred hcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCC-----
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 693 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----- 693 (728)
..++|+..+.||+|+||.||+|..+ +|+.||||.++.... .....+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 3456888899999999999999975 588999999965422 22356789999999999999999999987654
Q ss_pred -----eEEEEEecCCCCCHHHHHhcC
Q 004842 694 -----EQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 694 -----~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
..++|+||+++ ++.+++...
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~ 109 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG 109 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC
Confidence 78999999986 787877754
No 349
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.70 E-value=1.4e-08 Score=119.46 Aligned_cols=107 Identities=25% Similarity=0.324 Sum_probs=68.1
Q ss_pred cceeEEECCCCC--CccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEE
Q 004842 82 LHLRELQLLNLN--LSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (728)
Q Consensus 82 ~~l~~L~l~~~~--l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 159 (728)
+.+++|-+.+|. +.......|..++.|++|||++|.--+.+|..++.|-+|++|+|++..++ .+|..+++|..|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 356666666664 33222333566777777777766655667777777777777777777766 666677777777777
Q ss_pred EeeccCCCCCCcHhhhccCCCCEEEccCcc
Q 004842 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNS 189 (728)
Q Consensus 160 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 189 (728)
++..+.-...+|.....|++|++|.+..-.
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccccccccccchhhhcccccEEEeeccc
Confidence 776666555556666667777777665543
No 350
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.69 E-value=4.1e-08 Score=105.17 Aligned_cols=87 Identities=25% Similarity=0.420 Sum_probs=72.2
Q ss_pred cCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhc--------------HHHHHHHHHHHhcCCCCcccceeEEEEeC
Q 004842 628 SSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--------------EKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (728)
Q Consensus 628 ~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--------------~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 692 (728)
..+.||+|+||.||+|... +++.||||.+....... ...+.+|++++++++|+||+++++++...
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 3467999999999999854 58999999986432211 12578999999999999999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhcCC
Q 004842 693 GEQMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
+..++||||++ |+|.+++..+.
T Consensus 93 ~~~~lv~e~~~-~~l~~~l~~~~ 114 (335)
T PTZ00024 93 DFINLVMDIMA-SDLKKVVDRKI 114 (335)
T ss_pred CcEEEEEeccc-cCHHHHHHhcC
Confidence 99999999997 69999987643
No 351
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.69 E-value=2.2e-08 Score=104.36 Aligned_cols=88 Identities=27% Similarity=0.444 Sum_probs=73.9
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
|...+.||+|+||.||+|... +|..||+|+++.... ...+.+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 556688999999999999964 588999999865322 22346888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
+ |+|.++++..
T Consensus 82 ~-~~l~~~~~~~ 92 (284)
T cd07839 82 D-QDLKKYFDSC 92 (284)
T ss_pred C-CCHHHHHHhc
Confidence 8 5898888753
No 352
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.69 E-value=5.7e-08 Score=100.58 Aligned_cols=88 Identities=27% Similarity=0.406 Sum_probs=71.1
Q ss_pred cccCCceeccCceEEEEEEeC----CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC------
Q 004842 626 FNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------ 693 (728)
|...++||+|+||.||+|... .++.||||.+.... ....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 345678999999999999853 36789999986532 233467899999999999999999999886532
Q ss_pred eEEEEEecCCCCCHHHHHhc
Q 004842 694 EQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~~ 713 (728)
..++++||+++|+|.+++..
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~ 100 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLM 100 (273)
T ss_pred ceEEEEecCCCCcHHHHHHH
Confidence 24789999999999999863
No 353
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.68 E-value=5.3e-08 Score=101.25 Aligned_cols=89 Identities=28% Similarity=0.387 Sum_probs=71.7
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCC-CCcccceeEEEEeC--CeEEEEEe
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQMLVYE 700 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lV~E 700 (728)
|...+.||+|+||.||+|+. .+++.||+|+++.... .......+|+.++.++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 34567899999999999985 4588999999865322 22334568999999985 99999999999887 88999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
|++ |+|.+++..+.
T Consensus 81 ~~~-~~l~~~l~~~~ 94 (282)
T cd07831 81 LMD-MNLYELIKGRK 94 (282)
T ss_pred cCC-ccHHHHHHhcc
Confidence 997 68999887644
No 354
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.68 E-value=3.7e-08 Score=102.98 Aligned_cols=90 Identities=23% Similarity=0.309 Sum_probs=75.1
Q ss_pred cccCCceeccCceEEEEEEe----CCCCEEEEEEcccCCh----hcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEE
Q 004842 626 FNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 696 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 696 (728)
|+..+.||+|+||.||++.. .++..||||.++.... ...+.+.+|+.++.++ +|+||+++++++...+..+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 55668899999999999874 3578899999865322 2235688999999999 5999999999998888999
Q ss_pred EEEecCCCCCHHHHHhcCC
Q 004842 697 LVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~ 715 (728)
+||||+++|+|.+++....
T Consensus 82 lv~e~~~~~~L~~~~~~~~ 100 (288)
T cd05583 82 LILDYVNGGELFTHLYQRE 100 (288)
T ss_pred EEEecCCCCcHHHHHhhcC
Confidence 9999999999999997643
No 355
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.68 E-value=5.8e-08 Score=101.12 Aligned_cols=89 Identities=29% Similarity=0.480 Sum_probs=75.3
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
|+..+.||+|++|.||+|... +|..||+|++..... ...+.+.+|++++++++|+|++++++++..++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 445678999999999999854 689999999865432 22357889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCC
Q 004842 703 SNGTLRDQLSGIF 715 (728)
Q Consensus 703 ~~GsL~~~L~~~~ 715 (728)
+ ++|.+++....
T Consensus 81 ~-~~l~~~~~~~~ 92 (283)
T cd07835 81 D-LDLKKYMDSSP 92 (283)
T ss_pred C-cCHHHHHhhCC
Confidence 5 69999997654
No 356
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.68 E-value=8.9e-08 Score=101.52 Aligned_cols=89 Identities=29% Similarity=0.432 Sum_probs=73.4
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
|...+.||+|+||.||+|+.. +|..||+|.+..... ...+++.+|++++++++|+|++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 444567999999999999854 588999999864322 2235688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCC
Q 004842 702 MSNGTLRDQLSGIF 715 (728)
Q Consensus 702 ~~~GsL~~~L~~~~ 715 (728)
+. |++.+++....
T Consensus 103 ~~-~~l~~~l~~~~ 115 (313)
T cd06633 103 CL-GSASDLLEVHK 115 (313)
T ss_pred CC-CCHHHHHHhcC
Confidence 96 68888886543
No 357
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.68 E-value=4.8e-10 Score=122.07 Aligned_cols=155 Identities=25% Similarity=0.310 Sum_probs=100.8
Q ss_pred cHhhhccCCCCEEEccCcccccccccccCCC-CCCcEEECcCCCCC----------CCCCcCCCCCCCCcEEEcccccCC
Q 004842 171 PKSFANLNKTRHFHMNNNSISGQIPPELSRL-PSLVHMLLDNNNLT----------GYLPPELSELPKLLILQLDNNNFE 239 (728)
Q Consensus 171 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~----------~~~~~~l~~l~~L~~L~L~~N~l~ 239 (728)
|-.+....+|++|.|.++.+... ..+..+ ..|++|... |.++ |.+..++ ....|.+.+.++|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~-~Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSP-VWNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccch-hhhhHhhhhcchhhHH
Confidence 55666778888888888877531 111111 123333221 1111 1111111 1246888888999886
Q ss_pred CCCCcccccCCCCCcEEEccCCcCccCCCCCCCCCCcCEEEccCCCCcccCCCCCc-cCCccEEEccCCCCCCcCchhcc
Q 004842 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFS 318 (728)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~-~~~L~~L~Ls~N~l~~~~p~~~~ 318 (728)
.+..++.-++.|+.|+|++|+++... .+..++.|++|||++|.++ .+|.... ...|+.|.+++|.++.. ..+.
T Consensus 178 --~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 --LMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred --hHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhc-cccccchhhhhheeeeecccHHHhh--hhHH
Confidence 56777888888999999999988544 6778889999999999988 6665322 25688888888887743 3566
Q ss_pred CCccCceeecccccCcc
Q 004842 319 GLPRLQRLFIANNSLSG 335 (728)
Q Consensus 319 ~l~~L~~L~L~~N~l~~ 335 (728)
++.+|+.||++.|-|.+
T Consensus 252 ~LksL~~LDlsyNll~~ 268 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSE 268 (1096)
T ss_pred hhhhhhccchhHhhhhc
Confidence 77777777777777664
No 358
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.67 E-value=5.3e-08 Score=108.18 Aligned_cols=86 Identities=23% Similarity=0.254 Sum_probs=73.4
Q ss_pred cCCcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
...|...+.||+|+||.||+|..+. ++.||||.... ..+.+|++++++++|+|||++++++...+..++||||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 3467888999999999999999654 78899996432 2467899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCC
Q 004842 702 MSNGTLRDQLSGIF 715 (728)
Q Consensus 702 ~~~GsL~~~L~~~~ 715 (728)
+. |+|.+++....
T Consensus 242 ~~-~~L~~~l~~~~ 254 (461)
T PHA03211 242 YR-SDLYTYLGARL 254 (461)
T ss_pred cC-CCHHHHHHhcC
Confidence 95 79999987643
No 359
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.67 E-value=1.5e-08 Score=78.80 Aligned_cols=57 Identities=33% Similarity=0.576 Sum_probs=21.8
Q ss_pred CcEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccCc
Q 004842 132 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (728)
Q Consensus 132 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (728)
|++|++++|+++...++.|.++++|++|++++|.++...|..|.++++|++|++++|
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 334444444443333333333333343333333333333333333333333333333
No 360
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=98.67 E-value=8.1e-08 Score=98.39 Aligned_cols=90 Identities=26% Similarity=0.352 Sum_probs=74.3
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEe-CCeEEEEEe
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQMLVYE 700 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~E 700 (728)
+|...+.||+|++|.||++... +++.||+|++.... ....+.+.+|++++++++|+|++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 3667789999999999999854 47899999986432 2334578999999999999999999998764 446789999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
|+++|+|.+++...
T Consensus 81 ~~~~~~l~~~l~~~ 94 (257)
T cd08223 81 FCEGGDLYHKLKEQ 94 (257)
T ss_pred ccCCCcHHHHHHHh
Confidence 99999999999763
No 361
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.66 E-value=4.6e-08 Score=100.01 Aligned_cols=89 Identities=27% Similarity=0.461 Sum_probs=76.6
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|+..+.||+|+||.||+++. .+++.+|+|.+.... .....++.+|++++++++|+||+++.+++...+..++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 356678899999999999985 467899999987532 23345788999999999999999999999988999999999
Q ss_pred CCCCCHHHHHhc
Q 004842 702 MSNGTLRDQLSG 713 (728)
Q Consensus 702 ~~~GsL~~~L~~ 713 (728)
+++++|.+++..
T Consensus 81 ~~~~~L~~~~~~ 92 (256)
T cd08530 81 APFGDLSKAISK 92 (256)
T ss_pred cCCCCHHHHHHH
Confidence 999999999876
No 362
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.66 E-value=6.5e-09 Score=103.00 Aligned_cols=88 Identities=25% Similarity=0.388 Sum_probs=71.9
Q ss_pred CcccCCceeccCceEEEEEEeCC-----CCEEEEEEcccCChh--cHHHHHHHHHHHhcCCCCcccceeEEEEe-CCeEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQM 696 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~ 696 (728)
.|+....||+|.||.||||.-++ ...+|+|+++....+ -...-.+|+.+++.++|||||.|.-++.. +...+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 46667889999999999997432 236899999765321 13467899999999999999999999877 78899
Q ss_pred EEEecCCCCCHHHHHhc
Q 004842 697 LVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~ 713 (728)
+++||+++ ||.+.++-
T Consensus 105 l~fdYAEh-DL~~II~f 120 (438)
T KOG0666|consen 105 LLFDYAEH-DLWHIIKF 120 (438)
T ss_pred EEehhhhh-hHHHHHHH
Confidence 99999998 99999873
No 363
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.66 E-value=1.2e-07 Score=94.69 Aligned_cols=90 Identities=33% Similarity=0.534 Sum_probs=78.9
Q ss_pred cccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChh-cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
|...+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+.+++|+|++++++++...+..++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 3456789999999999999765 889999999865444 45689999999999999999999999998899999999999
Q ss_pred CCCHHHHHhcCC
Q 004842 704 NGTLRDQLSGIF 715 (728)
Q Consensus 704 ~GsL~~~L~~~~ 715 (728)
+++|.+++....
T Consensus 81 ~~~L~~~~~~~~ 92 (225)
T smart00221 81 GGDLFDYLRKKG 92 (225)
T ss_pred CCCHHHHHHhcc
Confidence 999999998654
No 364
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.65 E-value=7.2e-08 Score=101.95 Aligned_cols=88 Identities=30% Similarity=0.454 Sum_probs=73.3
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccC---ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
|+..+.||+|+||.||+|... ++..||+|.+... .....+++.+|++++++++|+|++++.+++......++||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 555678999999999999954 5788999998642 222345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
+. |++.+++...
T Consensus 97 ~~-~~l~~~~~~~ 108 (308)
T cd06634 97 CL-GSASDLLEVH 108 (308)
T ss_pred cC-CCHHHHHHHc
Confidence 97 6888887643
No 365
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.65 E-value=9e-08 Score=102.21 Aligned_cols=85 Identities=21% Similarity=0.300 Sum_probs=71.8
Q ss_pred Cceecc--CceEEEEEEe-CCCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQG--GYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G--~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
..||+| +||+||+++. .+|+.||||.+..... ...+.+.+|+.+++.++|||||++++++..++..++|+||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 346666 9999999985 4689999999865332 2235788999999999999999999999999999999999999
Q ss_pred CCHHHHHhcC
Q 004842 705 GTLRDQLSGI 714 (728)
Q Consensus 705 GsL~~~L~~~ 714 (728)
|+|.+++...
T Consensus 84 ~~l~~~l~~~ 93 (328)
T cd08226 84 GSANSLLKTY 93 (328)
T ss_pred CCHHHHHHhh
Confidence 9999999753
No 366
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.65 E-value=5.1e-08 Score=105.39 Aligned_cols=87 Identities=18% Similarity=0.253 Sum_probs=73.1
Q ss_pred cCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
..+|...+.||+|+||.||+|... .+..||+|..... ....|+.++++++|+|||++++++...+..++|+||
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence 346888899999999999999965 4678999986433 234689999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcCCC
Q 004842 702 MSNGTLRDQLSGIFS 716 (728)
Q Consensus 702 ~~~GsL~~~L~~~~~ 716 (728)
+. |+|.+++.....
T Consensus 139 ~~-~~l~~~l~~~~~ 152 (357)
T PHA03209 139 YS-SDLYTYLTKRSR 152 (357)
T ss_pred cC-CcHHHHHHhccC
Confidence 95 699999976433
No 367
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.65 E-value=1e-07 Score=100.98 Aligned_cols=86 Identities=29% Similarity=0.453 Sum_probs=71.7
Q ss_pred cccCCceeccCceEEEEEEeC---CCCEEEEEEcccCC---hhcHHHHHHHHHHHhcCCCCcccceeEEEEeC--CeEEE
Q 004842 626 FNSSTQIGQGGYGKVYKGILP---DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 697 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l 697 (728)
|...+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++.+++||||+++++++... +..++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 556678999999999999964 47899999997632 22235678999999999999999999999887 78999
Q ss_pred EEecCCCCCHHHHHh
Q 004842 698 VYEFMSNGTLRDQLS 712 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~ 712 (728)
||||+++ +|.+++.
T Consensus 82 v~e~~~~-~l~~~~~ 95 (316)
T cd07842 82 LFDYAEH-DLWQIIK 95 (316)
T ss_pred EEeCCCc-CHHHHHH
Confidence 9999985 6777764
No 368
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.65 E-value=4.7e-08 Score=99.65 Aligned_cols=84 Identities=30% Similarity=0.356 Sum_probs=73.0
Q ss_pred eeccCceEEEEEEeC-CCCEEEEEEcccCChh---cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCH
Q 004842 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (728)
Q Consensus 632 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (728)
||+|+||.||++... +++.+|+|.+...... ..+.+.+|++++++++|+||+++++.+..++..++||||+++|+|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999965 4889999998754322 345789999999999999999999999999999999999999999
Q ss_pred HHHHhcCC
Q 004842 708 RDQLSGIF 715 (728)
Q Consensus 708 ~~~L~~~~ 715 (728)
.+++....
T Consensus 81 ~~~l~~~~ 88 (250)
T cd05123 81 FSHLSKEG 88 (250)
T ss_pred HHHHHhcC
Confidence 99998653
No 369
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.64 E-value=8e-08 Score=103.31 Aligned_cols=91 Identities=23% Similarity=0.379 Sum_probs=73.8
Q ss_pred hcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC-----
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 693 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----- 693 (728)
..++|+..+.||+|+||.||++.. .+|..||||++.... ....+.+.+|++++++++|+||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 345688889999999999999984 468999999986432 222346889999999999999999999986543
Q ss_pred -eEEEEEecCCCCCHHHHHhc
Q 004842 694 -EQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 694 -~~~lV~Ey~~~GsL~~~L~~ 713 (728)
..++||||+ +++|.+++..
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~ 112 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH 112 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc
Confidence 358999999 6799988865
No 370
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.64 E-value=8e-08 Score=103.40 Aligned_cols=99 Identities=20% Similarity=0.333 Sum_probs=79.0
Q ss_pred chHHHHhhcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEe
Q 004842 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (728)
Q Consensus 615 ~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 691 (728)
...++...+++|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++.+++|+||+++.+++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3455666778899999999999999999984 568899999987532 2224568899999999999999999998864
Q ss_pred C------CeEEEEEecCCCCCHHHHHhcC
Q 004842 692 E------GEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 692 ~------~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
. ...++++||+ +|+|.+++...
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~ 115 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ 115 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC
Confidence 3 3467888876 78999888654
No 371
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.64 E-value=5e-08 Score=104.84 Aligned_cols=91 Identities=22% Similarity=0.339 Sum_probs=73.2
Q ss_pred cCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeC------C
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~ 693 (728)
.+.|...+.||+|+||.||+|.. .++..||||++..... ...+.+.+|++++++++|+|||++++++... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 45678889999999999999985 4578999999865322 2335688999999999999999999987543 3
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 004842 694 EQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
..++++||+ +++|.+++...
T Consensus 94 ~~~~~~~~~-~~~l~~~~~~~ 113 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVKCQ 113 (343)
T ss_pred cEEEEeecC-CCCHHHHHhcC
Confidence 578999988 67999888653
No 372
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.63 E-value=1.3e-07 Score=98.90 Aligned_cols=89 Identities=30% Similarity=0.491 Sum_probs=68.8
Q ss_pred CcccCCceeccCceEEEEEEe-C-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcC---CCCcccceeEEEEe-----C
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-P-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRL---HHRNLVSLVGYCDE-----E 692 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~-----~ 692 (728)
+|...+.||+|+||.||+|.. . +|+.||||.++.... .....+.+|+.+++.+ +||||++++++|.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 567778999999999999985 2 467899999864322 2234567777777665 79999999999852 3
Q ss_pred CeEEEEEecCCCCCHHHHHhcC
Q 004842 693 GEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
...++||||++ |+|.+++...
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~ 102 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKV 102 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhC
Confidence 46899999997 6999999753
No 373
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.63 E-value=9.2e-08 Score=101.14 Aligned_cols=91 Identities=29% Similarity=0.440 Sum_probs=74.1
Q ss_pred cCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChh--cHHHHHHHHHHHhcCCCCcccceeEEEEeC--CeEEE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 697 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l 697 (728)
.++|+..+.||+|+||.||+|... +|+.||+|.++..... ....+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 456888899999999999999964 5899999998643221 123567899999999999999999998754 56899
Q ss_pred EEecCCCCCHHHHHhcC
Q 004842 698 VYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~ 714 (728)
||||+++ +|.+++...
T Consensus 86 v~e~~~~-~l~~~l~~~ 101 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM 101 (309)
T ss_pred EEecCCC-CHHHHHHhc
Confidence 9999974 898888754
No 374
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.63 E-value=8.8e-08 Score=106.46 Aligned_cols=85 Identities=25% Similarity=0.398 Sum_probs=67.8
Q ss_pred cCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeC--------C
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--------G 693 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------~ 693 (728)
..+|...++||+|+||.||+|... .++.||||++.... ....+|+.++++++|+|||++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 356888899999999999999864 58899999885432 2345799999999999999999987432 2
Q ss_pred eEEEEEecCCCCCHHHHHh
Q 004842 694 EQMLVYEFMSNGTLRDQLS 712 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~ 712 (728)
..++||||+++ +|.+++.
T Consensus 141 ~l~lvmE~~~~-~l~~~~~ 158 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMK 158 (440)
T ss_pred EEEEEEecCCc-cHHHHHH
Confidence 46799999985 7877765
No 375
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.63 E-value=1.1e-07 Score=98.86 Aligned_cols=86 Identities=27% Similarity=0.340 Sum_probs=66.5
Q ss_pred ceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHH---hcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 631 QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFL---SRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 631 ~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l---~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
+||+|+||.||++... +++.||||.+..... ...+.+.+|..++ ...+|+||+++++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999864 588999999865322 1123344554433 34479999999999998899999999999
Q ss_pred CCCHHHHHhcCCC
Q 004842 704 NGTLRDQLSGIFS 716 (728)
Q Consensus 704 ~GsL~~~L~~~~~ 716 (728)
+|+|.+++.....
T Consensus 81 ~~~L~~~i~~~~~ 93 (279)
T cd05633 81 GGDLHYHLSQHGV 93 (279)
T ss_pred CCCHHHHHHhcCC
Confidence 9999999976543
No 376
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.62 E-value=5.9e-08 Score=104.03 Aligned_cols=91 Identities=24% Similarity=0.400 Sum_probs=73.8
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeC-----CeE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 695 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 695 (728)
..|...+.||+|+||.||+|.. .++..||||.+... .......+.+|+.+++.++|+||+++++++... ...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 4577788999999999999985 45899999998653 222345678899999999999999999988643 347
Q ss_pred EEEEecCCCCCHHHHHhcCC
Q 004842 696 MLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~~ 715 (728)
++||||+. |+|.+++....
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~ 103 (337)
T cd07858 85 YIVYELMD-TDLHQIIRSSQ 103 (337)
T ss_pred EEEEeCCC-CCHHHHHhcCC
Confidence 99999997 68999987643
No 377
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.62 E-value=5e-08 Score=101.56 Aligned_cols=89 Identities=29% Similarity=0.470 Sum_probs=74.2
Q ss_pred cccCCceeccCceEEEEEEeCC-CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCC-CCcccceeEEEEeCCeEEEEEecC
Q 004842 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
|...+.||+|+||.||+|...+ ++.||||++..... .......+|+..+++++ |+||+++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 3456789999999999999754 78899999865422 22334667999999999 999999999999999999999999
Q ss_pred CCCCHHHHHhcCC
Q 004842 703 SNGTLRDQLSGIF 715 (728)
Q Consensus 703 ~~GsL~~~L~~~~ 715 (728)
+|+|.++++...
T Consensus 81 -~~~l~~~~~~~~ 92 (283)
T cd07830 81 -EGNLYQLMKDRK 92 (283)
T ss_pred -CCCHHHHHHhcc
Confidence 889999998653
No 378
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.62 E-value=5.6e-08 Score=104.45 Aligned_cols=89 Identities=26% Similarity=0.348 Sum_probs=74.5
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeC----------
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE---------- 692 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~---------- 692 (728)
.+|...+.||+|+||.||+|.. .+|..||+|++........+.+.+|++++++++|+||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5677889999999999999985 45889999998765555556789999999999999999999876543
Q ss_pred ----CeEEEEEecCCCCCHHHHHhc
Q 004842 693 ----GEQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 693 ----~~~~lV~Ey~~~GsL~~~L~~ 713 (728)
...++||||++ ++|.+++..
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~ 108 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ 108 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc
Confidence 35789999998 599988864
No 379
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=98.62 E-value=7.4e-09 Score=118.45 Aligned_cols=101 Identities=23% Similarity=0.227 Sum_probs=85.1
Q ss_pred chHHHHhhcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChh---cHHHHHHHHHHHhcCCCCcccceeEEEE
Q 004842 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCD 690 (728)
Q Consensus 615 ~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~niv~l~g~~~ 690 (728)
...++....++|...++||+|+||.|.....+ .++.||+|++.+...- ...-|..|-.+|..-..+-||.+.-.+.
T Consensus 66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ 145 (1317)
T KOG0612|consen 66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ 145 (1317)
T ss_pred HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence 34566667788999999999999999999865 4789999999764332 2235888999999999999999999999
Q ss_pred eCCeEEEEEecCCCCCHHHHHhcCC
Q 004842 691 EEGEQMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 691 ~~~~~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
++.++|+|||||+||||-..|.+-.
T Consensus 146 D~~~LYlVMdY~pGGDlltLlSk~~ 170 (1317)
T KOG0612|consen 146 DERYLYLVMDYMPGGDLLTLLSKFD 170 (1317)
T ss_pred CccceEEEEecccCchHHHHHhhcC
Confidence 9999999999999999999998654
No 380
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.61 E-value=1.1e-07 Score=99.57 Aligned_cols=89 Identities=28% Similarity=0.412 Sum_probs=73.1
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCC-CCcccceeEEEEeCCe-----E
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGE-----Q 695 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~-----~ 695 (728)
+|+..+.||+|+||.||+|... +|+.||||.++.... ...+.+.+|+.++++++ |+||+++++++...+. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 5777889999999999999964 588999998865322 22357889999999995 6999999999977655 8
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 004842 696 MLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~ 714 (728)
++||||+++ +|.+++...
T Consensus 82 ~lv~e~~~~-~l~~~~~~~ 99 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSN 99 (295)
T ss_pred EEEeeccCc-CHHHHHHHh
Confidence 999999995 899998753
No 381
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.61 E-value=5.2e-08 Score=104.35 Aligned_cols=92 Identities=22% Similarity=0.348 Sum_probs=74.8
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEe----CCeEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQM 696 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~ 696 (728)
.+|+..+.||+|+||.||+|... +|..||+|++..... ...+.+.+|+.++++++|+||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 56788889999999999999854 589999999865322 234567889999999999999999998753 34689
Q ss_pred EEEecCCCCCHHHHHhcCCC
Q 004842 697 LVYEFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~~ 716 (728)
+||||++ |+|.++++....
T Consensus 85 lv~e~~~-~~l~~~~~~~~~ 103 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQP 103 (334)
T ss_pred EEEehhh-hhHHHHhccCCC
Confidence 9999996 699999976543
No 382
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.61 E-value=1.3e-07 Score=97.07 Aligned_cols=86 Identities=16% Similarity=0.228 Sum_probs=68.4
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCChh---cHHHHHHHHHHH-hcCCCCcccceeEEEEeCCeEEEEEecCCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFL-SRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l-~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 704 (728)
+.||+|+||.||+|... +|+.||||.+...... ....+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999864 5889999998654321 223455565544 455899999999999999999999999999
Q ss_pred CCHHHHHhcCC
Q 004842 705 GTLRDQLSGIF 715 (728)
Q Consensus 705 GsL~~~L~~~~ 715 (728)
|+|.+++....
T Consensus 82 ~~L~~~l~~~~ 92 (260)
T cd05611 82 GDCASLIKTLG 92 (260)
T ss_pred CCHHHHHHHcC
Confidence 99999997643
No 383
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.61 E-value=1.1e-07 Score=100.41 Aligned_cols=91 Identities=30% Similarity=0.457 Sum_probs=73.1
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCC-------
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------- 693 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------- 693 (728)
++|+..+.||+|+||.||+|... +++.||||.+..... .....+.+|++++++++||||++++++|...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 45778899999999999999864 588999999864322 22345678999999999999999999987654
Q ss_pred -eEEEEEecCCCCCHHHHHhcCC
Q 004842 694 -EQMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 694 -~~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
..++||||+++ +|.+++....
T Consensus 92 ~~~~lv~e~~~~-~l~~~l~~~~ 113 (310)
T cd07865 92 GSFYLVFEFCEH-DLAGLLSNKN 113 (310)
T ss_pred ceEEEEEcCCCc-CHHHHHHhcc
Confidence 35999999974 8988887653
No 384
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.61 E-value=7.2e-08 Score=104.19 Aligned_cols=91 Identities=21% Similarity=0.289 Sum_probs=72.8
Q ss_pred hcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeC------
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 692 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------ 692 (728)
..++|...+.||+|+||.||++.. ..++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 346788889999999999999984 358899999996532 22345788999999999999999999988643
Q ss_pred CeEEEEEecCCCCCHHHHHhc
Q 004842 693 GEQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 693 ~~~~lV~Ey~~~GsL~~~L~~ 713 (728)
...++||||+++ ++.+++..
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~ 114 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM 114 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh
Confidence 347999999975 67777654
No 385
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.61 E-value=1.5e-09 Score=103.96 Aligned_cols=91 Identities=22% Similarity=0.396 Sum_probs=75.7
Q ss_pred CCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+.|+..++||+|.|+.||++. .+.|+.+|+|.+... +..+.++..+|+++-..++|||||+|...+.+....|+|+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 345556789999999999997 456888999887542 22345678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
+|++|+|..-+-.+
T Consensus 91 ~m~G~dl~~eIV~R 104 (355)
T KOG0033|consen 91 LVTGGELFEDIVAR 104 (355)
T ss_pred cccchHHHHHHHHH
Confidence 99999997766544
No 386
>PRK10345 hypothetical protein; Provisional
Probab=98.60 E-value=1.8e-07 Score=92.25 Aligned_cols=87 Identities=17% Similarity=0.260 Sum_probs=68.2
Q ss_pred cccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcC-----CCCcccceeEEEEeCC---e-EE
Q 004842 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-----HHRNLVSLVGYCDEEG---E-QM 696 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-----~H~niv~l~g~~~~~~---~-~~ 696 (728)
+.....||+|+||.||. .-.++.. +||++........+++.+|+.+++.+ .||||++++|++.++. . ..
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 44568899999999996 3233444 79988765444567899999999999 6799999999998763 3 33
Q ss_pred EEEec--CCCCCHHHHHhcC
Q 004842 697 LVYEF--MSNGTLRDQLSGI 714 (728)
Q Consensus 697 lV~Ey--~~~GsL~~~L~~~ 714 (728)
+|+|| +++|+|.+++...
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~ 101 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC 101 (210)
T ss_pred EEecCCCCcchhHHHHHHcc
Confidence 78999 6689999999753
No 387
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.60 E-value=1e-07 Score=103.35 Aligned_cols=90 Identities=19% Similarity=0.285 Sum_probs=72.6
Q ss_pred cCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeC------C
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~ 693 (728)
.++|...+.||+|+||.||++... .++.||||++.... ....+++.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 457888899999999999999853 58899999996532 22345788999999999999999999987543 3
Q ss_pred eEEEEEecCCCCCHHHHHhc
Q 004842 694 EQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~~ 713 (728)
..++||||+++ +|.+++..
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~ 121 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQM 121 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHh
Confidence 57999999975 77777754
No 388
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.59 E-value=1.2e-08 Score=99.27 Aligned_cols=95 Identities=22% Similarity=0.347 Sum_probs=78.5
Q ss_pred CcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChh--c------HHHHHHHHHHHhcC-CCCcccceeEEEEeCCe
Q 004842 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--G------EKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 694 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~------~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 694 (728)
.|...+++|+|..+.|.++.. +.|..+|+|++...... . .++-.+|+.+++++ -||+|+++.++|.++..
T Consensus 18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF 97 (411)
T KOG0599|consen 18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF 97 (411)
T ss_pred hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence 466778999999999998875 45888999998643211 1 23567899999998 79999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcCCCccc
Q 004842 695 QMLVYEFMSNGTLRDQLSGIFSVIR 719 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~~~~~~ 719 (728)
.++|+|.|+.|.|+|||.......+
T Consensus 98 ~FlVFdl~prGELFDyLts~VtlSE 122 (411)
T KOG0599|consen 98 VFLVFDLMPRGELFDYLTSKVTLSE 122 (411)
T ss_pred hhhhhhhcccchHHHHhhhheeecH
Confidence 9999999999999999998765554
No 389
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.59 E-value=1.6e-07 Score=97.04 Aligned_cols=88 Identities=17% Similarity=0.195 Sum_probs=66.2
Q ss_pred cCCcccCCce--eccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEE
Q 004842 623 TNNFNSSTQI--GQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (728)
Q Consensus 623 ~~~~~~~~~i--G~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 698 (728)
.++|...+.+ |+|+||.||++.. .++..+|+|.+........ |+.....+ +|+||+++++++...+..++|
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv 87 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLI 87 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence 3455555555 9999999999985 4578899999865322111 22222212 799999999999999999999
Q ss_pred EecCCCCCHHHHHhcCC
Q 004842 699 YEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 699 ~Ey~~~GsL~~~L~~~~ 715 (728)
|||+++|+|.+++....
T Consensus 88 ~e~~~~~~L~~~l~~~~ 104 (267)
T PHA03390 88 MDYIKDGDLFDLLKKEG 104 (267)
T ss_pred EEcCCCCcHHHHHHhcC
Confidence 99999999999998754
No 390
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.58 E-value=5.1e-09 Score=113.44 Aligned_cols=94 Identities=23% Similarity=0.351 Sum_probs=78.9
Q ss_pred hcCCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
...+|.....+|.|.||.|||+. ...+...|||.++-.......-...|+-+++..+|+|||.++|.|...+..|+.||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 34566777889999999999998 45688999999976544344455689999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcCC
Q 004842 701 FMSNGTLRDQLSGIF 715 (728)
Q Consensus 701 y~~~GsL~~~L~~~~ 715 (728)
||.+|+|.+.=|...
T Consensus 93 ycgggslQdiy~~Tg 107 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVTG 107 (829)
T ss_pred ecCCCcccceeeecc
Confidence 999999999877543
No 391
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.58 E-value=1.1e-07 Score=101.93 Aligned_cols=91 Identities=24% Similarity=0.396 Sum_probs=74.1
Q ss_pred cCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC-----eE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQ 695 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~ 695 (728)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.++++++|+||+++++++...+ ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 45788889999999999999985 468999999986422 223456889999999999999999999876543 47
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 004842 696 MLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~ 714 (728)
++|+||+++ +|.+++..+
T Consensus 84 ~lv~e~~~~-~l~~~~~~~ 101 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ 101 (336)
T ss_pred EEEehhccc-CHHHHHhcC
Confidence 999999984 898888654
No 392
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=98.58 E-value=1.5e-07 Score=98.00 Aligned_cols=85 Identities=26% Similarity=0.331 Sum_probs=66.2
Q ss_pred ceeccCceEEEEEEe-CCCCEEEEEEcccCCh---hcHHHHHHHHH---HHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 631 QIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQ---FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 631 ~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~---~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
+||+|+||.||++.. ..++.||+|.+..... .....+..|.. .++...|++|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999985 4588999999865321 11223444543 3445689999999999999999999999999
Q ss_pred CCCHHHHHhcCC
Q 004842 704 NGTLRDQLSGIF 715 (728)
Q Consensus 704 ~GsL~~~L~~~~ 715 (728)
+|+|.+++....
T Consensus 81 g~~L~~~l~~~~ 92 (278)
T cd05606 81 GGDLHYHLSQHG 92 (278)
T ss_pred CCcHHHHHHhcC
Confidence 999999997653
No 393
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.58 E-value=1.9e-08 Score=96.93 Aligned_cols=92 Identities=24% Similarity=0.348 Sum_probs=80.3
Q ss_pred cCCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeC-----CeEE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQM 696 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~~ 696 (728)
.+.|...+.+|+|+|..||.++ +.++..+|+|++.....++.+...+|++.-++++|||++++++++..+ .+.|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 3457778999999999999998 677899999999887767777899999999999999999999988543 3489
Q ss_pred EEEecCCCCCHHHHHhcC
Q 004842 697 LVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~ 714 (728)
|+++|...|+|.|.+...
T Consensus 100 ll~Pyy~~Gsl~d~i~~~ 117 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERL 117 (302)
T ss_pred EEeehhccccHHHHHHHH
Confidence 999999999999999753
No 394
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.57 E-value=1.1e-07 Score=101.85 Aligned_cols=91 Identities=29% Similarity=0.491 Sum_probs=74.0
Q ss_pred cCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccC--ChhcHHHHHHHHHHHhcC-CCCcccceeEEEEeC--CeEE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE--GEQM 696 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~ 696 (728)
..+|...+.||+|+||.||+|... +|+.||||++... .......+.+|+.++.++ +|+||++++|++... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 345777789999999999999865 5789999998542 222335678899999999 999999999998654 3689
Q ss_pred EEEecCCCCCHHHHHhcC
Q 004842 697 LVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~ 714 (728)
+||||++ |+|.+++...
T Consensus 86 lv~e~~~-~~L~~~~~~~ 102 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN 102 (337)
T ss_pred EEecccc-cCHHHHHhcC
Confidence 9999998 5999998764
No 395
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.57 E-value=1.5e-07 Score=103.13 Aligned_cols=85 Identities=20% Similarity=0.224 Sum_probs=72.0
Q ss_pred CCcccCCceeccCceEEEEEEeC---CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEe
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
..|...+.||+|+||.||++... .+..||||.+... +.+.+|++++++++|||||++++++......++|||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 45778899999999999999753 3568999988653 245689999999999999999999998899999999
Q ss_pred cCCCCCHHHHHhcC
Q 004842 701 FMSNGTLRDQLSGI 714 (728)
Q Consensus 701 y~~~GsL~~~L~~~ 714 (728)
|+. |+|.+++...
T Consensus 167 ~~~-~~l~~~l~~~ 179 (392)
T PHA03207 167 KYK-CDLFTYVDRS 179 (392)
T ss_pred hcC-CCHHHHHHhc
Confidence 996 6899999544
No 396
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.57 E-value=2.1e-07 Score=98.77 Aligned_cols=81 Identities=23% Similarity=0.423 Sum_probs=66.5
Q ss_pred CCceeccCceEEEEEEeCC---CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEe--CCeEEEEEecCC
Q 004842 629 STQIGQGGYGKVYKGILPD---GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVYEFMS 703 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~---g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~Ey~~ 703 (728)
..+||+|+||.||+|...+ +..||+|.+..... ...+.+|++++++++|||||++++++.. +...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 3679999999999998643 46899999865432 3467899999999999999999999854 456899999988
Q ss_pred CCCHHHHHh
Q 004842 704 NGTLRDQLS 712 (728)
Q Consensus 704 ~GsL~~~L~ 712 (728)
+ +|.+++.
T Consensus 84 ~-~l~~~~~ 91 (317)
T cd07867 84 H-DLWHIIK 91 (317)
T ss_pred C-cHHHHHH
Confidence 5 7888875
No 397
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.56 E-value=2.4e-07 Score=98.38 Aligned_cols=81 Identities=25% Similarity=0.426 Sum_probs=66.5
Q ss_pred CCceeccCceEEEEEEeC---CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEe--CCeEEEEEecCC
Q 004842 629 STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVYEFMS 703 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~Ey~~ 703 (728)
..+||+|+||.||+|... +++.||+|.+..... ..++.+|++++++++|||||++++++.. ....++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999864 457899999865422 3467899999999999999999998854 456899999997
Q ss_pred CCCHHHHHh
Q 004842 704 NGTLRDQLS 712 (728)
Q Consensus 704 ~GsL~~~L~ 712 (728)
+ +|.+++.
T Consensus 84 ~-~l~~~~~ 91 (317)
T cd07868 84 H-DLWHIIK 91 (317)
T ss_pred C-CHHHHHH
Confidence 4 8888875
No 398
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.56 E-value=8.5e-08 Score=98.52 Aligned_cols=88 Identities=20% Similarity=0.239 Sum_probs=70.4
Q ss_pred cccCCceeccCceEEEEEEeCC-CCEEEEEEcccC-----ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
|...+.||+|+||.||++.... +..+++|.++.. ......++.+|+.++++++||||+++++++...+..++||
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 5567889999999999998543 444556655432 1222345778999999999999999999998888999999
Q ss_pred ecCCCCCHHHHHhc
Q 004842 700 EFMSNGTLRDQLSG 713 (728)
Q Consensus 700 Ey~~~GsL~~~L~~ 713 (728)
||+++++|.++++.
T Consensus 82 e~~~~~~l~~~~~~ 95 (260)
T cd08222 82 EYCEGRDLDCKLEE 95 (260)
T ss_pred EeCCCCCHHHHHHH
Confidence 99999999999874
No 399
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.56 E-value=8.3e-08 Score=99.77 Aligned_cols=88 Identities=30% Similarity=0.460 Sum_probs=75.2
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
|+..+.||+|.||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++|+|++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 345578999999999999965 48999999987643 223457889999999999999999999999989999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
+ ++|.+++...
T Consensus 81 ~-~~l~~~i~~~ 91 (282)
T cd07829 81 D-MDLKKYLDKR 91 (282)
T ss_pred C-cCHHHHHHhh
Confidence 8 5999999875
No 400
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.53 E-value=1.5e-07 Score=97.87 Aligned_cols=88 Identities=32% Similarity=0.485 Sum_probs=74.6
Q ss_pred ccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCC
Q 004842 627 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (728)
Q Consensus 627 ~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 703 (728)
...+.||+|++|.||+|... +++.+|+|++..... ...+.+.+|++++++++|+||+++++++..++..++||||++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD 81 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence 45578999999999999864 588999999865432 234678899999999999999999999999999999999998
Q ss_pred CCCHHHHHhcCC
Q 004842 704 NGTLRDQLSGIF 715 (728)
Q Consensus 704 ~GsL~~~L~~~~ 715 (728)
+ +|.+++..+.
T Consensus 82 ~-~l~~~l~~~~ 92 (283)
T cd05118 82 T-DLYKLIKDRQ 92 (283)
T ss_pred C-CHHHHHHhhc
Confidence 5 9999887753
No 401
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.53 E-value=1.8e-07 Score=100.51 Aligned_cols=88 Identities=25% Similarity=0.407 Sum_probs=71.1
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC------e
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------E 694 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~ 694 (728)
.+|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++|+||+++++++.... .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 5677889999999999999985 468999999986432 122346889999999999999999999986542 4
Q ss_pred EEEEEecCCCCCHHHHHh
Q 004842 695 QMLVYEFMSNGTLRDQLS 712 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~ 712 (728)
.++|+||++. +|.+++.
T Consensus 95 ~~lv~e~~~~-~l~~~~~ 111 (342)
T cd07879 95 FYLVMPYMQT-DLQKIMG 111 (342)
T ss_pred EEEEeccccc-CHHHHHc
Confidence 6899999975 7877754
No 402
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.53 E-value=1.3e-07 Score=101.01 Aligned_cols=89 Identities=27% Similarity=0.427 Sum_probs=75.2
Q ss_pred cccCCceeccCceEEEEEEeCC-CCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC-----eEEE
Q 004842 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQML 697 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~l 697 (728)
|...+.||+|+||.||+|...+ +..||||++.... ....+.+.+|+++++.++|+||+++.+++...+ ..++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 5667899999999999999654 8899999987543 233467999999999999999999999997765 7899
Q ss_pred EEecCCCCCHHHHHhcCC
Q 004842 698 VYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~~ 715 (728)
||||++ ++|.++++...
T Consensus 82 v~e~~~-~~l~~~l~~~~ 98 (330)
T cd07834 82 VTELME-TDLHKVIKSPQ 98 (330)
T ss_pred Eecchh-hhHHHHHhCCC
Confidence 999999 58999997654
No 403
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.52 E-value=2.2e-07 Score=98.47 Aligned_cols=84 Identities=24% Similarity=0.167 Sum_probs=68.7
Q ss_pred CceeccCceEEEEEEeCCCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCH
Q 004842 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (728)
+.+|.|+++.||++.. +++.||||++... .....+.+.+|+++++.++|+||+++++++...+..+++|||+++|+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 3345556666666655 6899999998654 233446799999999999999999999999999999999999999999
Q ss_pred HHHHhcC
Q 004842 708 RDQLSGI 714 (728)
Q Consensus 708 ~~~L~~~ 714 (728)
.++++..
T Consensus 87 ~~~l~~~ 93 (314)
T cd08216 87 EDLLKTH 93 (314)
T ss_pred HHHHHHh
Confidence 9999863
No 404
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.52 E-value=1.3e-08 Score=117.94 Aligned_cols=94 Identities=28% Similarity=0.388 Sum_probs=79.8
Q ss_pred hhcCCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
..+-+++....||.|.||.||-|. ..+|...|||-+... .....+...+|+.++..++|||+|+.+|+-...+..+|
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 345567778899999999999998 566999999987543 22233567899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 004842 698 VYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~ 714 (728)
.||||++|+|.+.+...
T Consensus 1312 FMEyC~~GsLa~ll~~g 1328 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHG 1328 (1509)
T ss_pred HHHHhccCcHHHHHHhc
Confidence 99999999999999754
No 405
>PTZ00284 protein kinase; Provisional
Probab=98.51 E-value=1.9e-07 Score=104.74 Aligned_cols=96 Identities=22% Similarity=0.305 Sum_probs=72.0
Q ss_pred HHHhhcCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCC------cccceeEEEE
Q 004842 618 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR------NLVSLVGYCD 690 (728)
Q Consensus 618 ~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~------niv~l~g~~~ 690 (728)
++...+.+|...++||+|+||.||+|... .++.||||+++.... ..+++..|+.++..++|. +++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34445678999999999999999999854 578899999964322 234556677777766554 5888998886
Q ss_pred eC-CeEEEEEecCCCCCHHHHHhcCC
Q 004842 691 EE-GEQMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 691 ~~-~~~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
.. +..++||||+ +|+|.+++....
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~ 226 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHG 226 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcC
Confidence 54 4688999988 678999987643
No 406
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.50 E-value=3.6e-07 Score=95.44 Aligned_cols=88 Identities=33% Similarity=0.551 Sum_probs=68.1
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh--hcHHHHHHHHHHHhcC---CCCcccceeEEEEe-----CCe
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRL---HHRNLVSLVGYCDE-----EGE 694 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~-----~~~ 694 (728)
|...+.||+|+||.||+|... +|+.||+|.++.... .....+.+|++++.++ +||||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 566788999999999999864 588999999865322 1223566777777655 79999999999864 245
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 004842 695 QMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~ 714 (728)
.++||||++ |+|.++++..
T Consensus 82 ~~lv~e~~~-~~l~~~~~~~ 100 (288)
T cd07863 82 VTLVFEHVD-QDLRTYLDKV 100 (288)
T ss_pred EEEEEcccc-cCHHHHHHhc
Confidence 799999998 5899998753
No 407
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.49 E-value=3.5e-07 Score=96.07 Aligned_cols=89 Identities=27% Similarity=0.453 Sum_probs=72.3
Q ss_pred CCcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCC-CCcccceeEEEEeCCeEEEEEe
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E 700 (728)
++|...+.||+|+||.||+|...+ ++.||||.++.... ....++.+|++++.+.. |+||++++|+|......++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 456677899999999999999865 88999999975432 23456778888777775 9999999999999999999999
Q ss_pred cCCCCCHHHHHhc
Q 004842 701 FMSNGTLRDQLSG 713 (728)
Q Consensus 701 y~~~GsL~~~L~~ 713 (728)
|+++ ++.+++..
T Consensus 95 ~~~~-~l~~l~~~ 106 (296)
T cd06618 95 LMST-CLDKLLKR 106 (296)
T ss_pred ccCc-CHHHHHHH
Confidence 9864 77776654
No 408
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.48 E-value=3.9e-07 Score=98.35 Aligned_cols=91 Identities=21% Similarity=0.336 Sum_probs=73.7
Q ss_pred cCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeC------C
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~ 693 (728)
...|+..+.||+|+||.||+|.. .+|+.||||.+... .....+++.+|+.++++++|+||+++++++... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 45688889999999999999985 46899999998643 223345688999999999999999999998643 3
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 004842 694 EQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 694 ~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
..++||||++ |+|.+++...
T Consensus 95 ~~~lv~e~~~-~~l~~~~~~~ 114 (353)
T cd07850 95 DVYLVMELMD-ANLCQVIQMD 114 (353)
T ss_pred cEEEEEeccC-CCHHHHHhhc
Confidence 4699999997 5888887653
No 409
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.48 E-value=4.2e-08 Score=97.72 Aligned_cols=96 Identities=25% Similarity=0.283 Sum_probs=79.9
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHH---HHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKE---FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~---f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
++|+..+++|+|.||.|..+.- ..|+.+|+|.+++.-....++ -..|-+++...+||.+..|.-.+...+.++.||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 4677889999999999999874 468999999998754433333 467889999999999999998888999999999
Q ss_pred ecCCCCCHHHHHhcCCCccc
Q 004842 700 EFMSNGTLRDQLSGIFSVIR 719 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~~~~ 719 (728)
||+.+|+|+-+|...+...+
T Consensus 248 eyanGGeLf~HLsrer~FsE 267 (516)
T KOG0690|consen 248 EYANGGELFFHLSRERVFSE 267 (516)
T ss_pred EEccCceEeeehhhhhcccc
Confidence 99999999999987654444
No 410
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.45 E-value=4.7e-07 Score=94.54 Aligned_cols=84 Identities=26% Similarity=0.436 Sum_probs=68.5
Q ss_pred CcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCC-CCcccceeEEEEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+|.....||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. |+|||+++|++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3445578999999999999854 58899999987543 233457899999999996 99999999999988899999999
Q ss_pred CCCCCHHH
Q 004842 702 MSNGTLRD 709 (728)
Q Consensus 702 ~~~GsL~~ 709 (728)
++. ++.+
T Consensus 85 ~~~-~l~~ 91 (288)
T cd06616 85 MDI-SLDK 91 (288)
T ss_pred ccC-CHHH
Confidence 874 4444
No 411
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.45 E-value=6.3e-07 Score=93.35 Aligned_cols=88 Identities=32% Similarity=0.476 Sum_probs=70.3
Q ss_pred cccCCceeccCceEEEEEEeCC-CCEEEEEEcccCCh--hcHHHHHHHHHHHhcC---CCCcccceeEEEEeCCe-----
Q 004842 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL--QGEKEFLTEIQFLSRL---HHRNLVSLVGYCDEEGE----- 694 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~----- 694 (728)
|+..+.||+|+||.||+|+.+. ++.||+|++..... ....++.+|+.++.++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 3456789999999999999764 89999999964322 2234577788777655 69999999999988776
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 004842 695 QMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~ 714 (728)
.+++|||++ ++|.++++..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~ 99 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKC 99 (287)
T ss_pred eEEEehhcc-cCHHHHHHHc
Confidence 899999998 5899998763
No 412
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.43 E-value=3.8e-07 Score=96.31 Aligned_cols=92 Identities=27% Similarity=0.400 Sum_probs=72.9
Q ss_pred cCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChh--cHHHHHHHHHHHhcCCCCcccceeEEEEeCC------
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------ 693 (728)
.++|...+.||+|+||.||+|... +++.||||++...... ....+.+|++++++++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 457888899999999999999964 5889999998643221 2346789999999999999999999875433
Q ss_pred --eEEEEEecCCCCCHHHHHhcCC
Q 004842 694 --EQMLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 694 --~~~lV~Ey~~~GsL~~~L~~~~ 715 (728)
..++|+||++. ++.+++....
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~ 109 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS 109 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc
Confidence 46999999985 7888777543
No 413
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.42 E-value=8.3e-08 Score=99.21 Aligned_cols=93 Identities=25% Similarity=0.321 Sum_probs=72.6
Q ss_pred cccCCceeccCceEEEEEE-eCCCCEEEEEEcccCC--hhcH-----HHHHHHHHHHhcCCCCcccceeEEEE-eCCeEE
Q 004842 626 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS--LQGE-----KEFLTEIQFLSRLHHRNLVSLVGYCD-EEGEQM 696 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~-----~~f~~E~~~l~~l~H~niv~l~g~~~-~~~~~~ 696 (728)
|-..+++|+|+|..|||+. +...+.||||.-+... .... +-..+|-++-+.+.||.||++++|+. +.+.++
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC 544 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC 544 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence 3445789999999999998 5557789999764321 1111 23678999999999999999999985 456788
Q ss_pred EEEecCCCCCHHHHHhcCCCcc
Q 004842 697 LVYEFMSNGTLRDQLSGIFSVI 718 (728)
Q Consensus 697 lV~Ey~~~GsL~~~L~~~~~~~ 718 (728)
-|.|||++.||+-||...+...
T Consensus 545 TVLEYceGNDLDFYLKQhklmS 566 (775)
T KOG1151|consen 545 TVLEYCEGNDLDFYLKQHKLMS 566 (775)
T ss_pred eeeeecCCCchhHHHHhhhhhh
Confidence 9999999999999998765433
No 414
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.42 E-value=2.9e-07 Score=98.95 Aligned_cols=91 Identities=21% Similarity=0.384 Sum_probs=74.4
Q ss_pred cCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCe-----
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 694 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----- 694 (728)
.++|.....||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++|+||+++.+++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 456788899999999999999964 57899999986532 2233567889999999999999999998866554
Q ss_pred -EEEEEecCCCCCHHHHHhcC
Q 004842 695 -QMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 695 -~~lV~Ey~~~GsL~~~L~~~ 714 (728)
.++|+||+ +++|.+++...
T Consensus 94 ~~~lv~e~~-~~~L~~~~~~~ 113 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVKCQ 113 (343)
T ss_pred cEEEEEecC-CCCHHHHHhcC
Confidence 89999999 56999998763
No 415
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.39 E-value=1.6e-06 Score=84.90 Aligned_cols=83 Identities=35% Similarity=0.579 Sum_probs=73.4
Q ss_pred eeccCceEEEEEEeCC-CCEEEEEEcccCChh-cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCHHH
Q 004842 632 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709 (728)
Q Consensus 632 iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL~~ 709 (728)
||+|.+|.||++...+ ++.+++|+....... ..+.+.+|++.+..++|++++++++++......++|+||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 889999999765432 34579999999999999999999999998899999999999999999
Q ss_pred HHhcC
Q 004842 710 QLSGI 714 (728)
Q Consensus 710 ~L~~~ 714 (728)
++...
T Consensus 81 ~~~~~ 85 (215)
T cd00180 81 LLKEN 85 (215)
T ss_pred HHHhc
Confidence 99864
No 416
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.39 E-value=8.5e-07 Score=94.85 Aligned_cols=89 Identities=24% Similarity=0.268 Sum_probs=69.8
Q ss_pred cccCCceeccCceEEEEEEeC-C--CCEEEEEEcccCC--hhcHHHHHHHHHHHhcC-CCCcccceeEEEEeC----CeE
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-D--GTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE----GEQ 695 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~--g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~----~~~ 695 (728)
|...+.||+|+||.||++... . +..||||++.... ....+.+.+|++++.++ .|+|||++++++... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 566788999999999999964 3 6789999986432 22245688999999999 599999999976432 357
Q ss_pred EEEEecCCCCCHHHHHhcCC
Q 004842 696 MLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~~ 715 (728)
++++||++ ++|.+++....
T Consensus 82 ~~~~e~~~-~~L~~~l~~~~ 100 (332)
T cd07857 82 YLYEELME-ADLHQIIRSGQ 100 (332)
T ss_pred EEEEeccc-CCHHHHHhcCC
Confidence 88999987 69999987543
No 417
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.38 E-value=4.2e-07 Score=88.54 Aligned_cols=80 Identities=23% Similarity=0.248 Sum_probs=58.3
Q ss_pred CCceeccCceEEEEEEeCCCCEEEEEEcccCChh--c-------HHHH-----------------HHHHHHHhcCCCCcc
Q 004842 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--G-------EKEF-----------------LTEIQFLSRLHHRNL 682 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~-------~~~f-----------------~~E~~~l~~l~H~ni 682 (728)
...||+|+||.||+|..++|+.||||+++..... . ...| ..|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3579999999999999878999999999754211 1 0122 349999999988877
Q ss_pred cceeEEEEeCCeEEEEEecCCCCCHHHH
Q 004842 683 VSLVGYCDEEGEQMLVYEFMSNGTLRDQ 710 (728)
Q Consensus 683 v~l~g~~~~~~~~~lV~Ey~~~GsL~~~ 710 (728)
.....+.. ...++||||++++++...
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~ 107 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAP 107 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcch
Confidence 54443322 234899999999887655
No 418
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.36 E-value=2.2e-07 Score=100.82 Aligned_cols=101 Identities=21% Similarity=0.363 Sum_probs=74.7
Q ss_pred ccCCceeccCceEEEEEEeC-CCCEEEEEEcc--c--CChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC--eEEEEE
Q 004842 627 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQ--E--GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVY 699 (728)
Q Consensus 627 ~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~--~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~ 699 (728)
....+||+|+|-+||||.-. +|..||=-.++ . ......+.|..|+++++.++|+|||+++.+..+.. ..-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 34578999999999999843 46667622221 1 12223367999999999999999999999987654 478999
Q ss_pred ecCCCCCHHHHHhcCCCccc----------cccccccc
Q 004842 700 EFMSNGTLRDQLSGIFSVIR----------HSGICFFL 727 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~~~~----------~~~~~~~~ 727 (728)
|.|..|+|++|+.+.+...- ..++.|+|
T Consensus 123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLH 160 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLH 160 (632)
T ss_pred ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhh
Confidence 99999999999986543211 56666666
No 419
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.35 E-value=1.4e-06 Score=86.57 Aligned_cols=84 Identities=17% Similarity=0.255 Sum_probs=69.2
Q ss_pred CceeccCceEEEEEEeCCCCEEEEEEcccCChh--------cHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEec
Q 004842 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
+.||+|++|.||+|.. +|..|+||........ ....+.+|++++..++|++++....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999987 6778999986532211 123588999999999999998888888777888999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
+++++|.+++...
T Consensus 81 ~~G~~L~~~~~~~ 93 (211)
T PRK14879 81 IEGEPLKDLINSN 93 (211)
T ss_pred eCCcCHHHHHHhc
Confidence 9999999998653
No 420
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.34 E-value=1.5e-06 Score=87.47 Aligned_cols=80 Identities=31% Similarity=0.479 Sum_probs=70.8
Q ss_pred CceEEEEEEeCC-CCEEEEEEcccCChhc-HHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCHHHHHhc
Q 004842 636 GYGKVYKGILPD-GTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 636 ~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~-~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~~ 713 (728)
+||.||+|+..+ |+.+|+|++....... .+.|.+|++.+++++|+|++++.|++......++||||+++|+|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999999764 8999999997655444 57899999999999999999999999998999999999999999999976
Q ss_pred CC
Q 004842 714 IF 715 (728)
Q Consensus 714 ~~ 715 (728)
..
T Consensus 81 ~~ 82 (244)
T smart00220 81 RG 82 (244)
T ss_pred cc
Confidence 44
No 421
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.33 E-value=7.8e-07 Score=95.33 Aligned_cols=95 Identities=22% Similarity=0.322 Sum_probs=75.7
Q ss_pred cCCcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChhc-----H---HHHHHHHHHHhcCC---CCcccceeEEEE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQG-----E---KEFLTEIQFLSRLH---HRNLVSLVGYCD 690 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~-----~---~~f~~E~~~l~~l~---H~niv~l~g~~~ 690 (728)
..+|+..+.+|+|+||.|+.|..+. ...|.||++.+.+.-. . ...-.|+.+|..++ |+||+|++.++.
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 3467788899999999999999765 5679999997653321 1 12456999999997 999999999999
Q ss_pred eCCeEEEEEecC-CCCCHHHHHhcCCCc
Q 004842 691 EEGEQMLVYEFM-SNGTLRDQLSGIFSV 717 (728)
Q Consensus 691 ~~~~~~lV~Ey~-~~GsL~~~L~~~~~~ 717 (728)
+++..||+||-. ++-||++++.-+...
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp~m 667 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKPRM 667 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccCcc
Confidence 999999999965 445999999866443
No 422
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.32 E-value=1.9e-08 Score=109.96 Aligned_cols=124 Identities=27% Similarity=0.309 Sum_probs=65.7
Q ss_pred CCCEEEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCc-CCCCCCCCcEEEc
Q 004842 155 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPP-ELSELPKLLILQL 233 (728)
Q Consensus 155 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L 233 (728)
.|...+.++|.+. .+..++.-++.|+.|+|++|++...- .+..++.|++|||++|.+.. +|. ....+ +|+.|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRH-VPQLSMVGC-KLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhcc-ccccchhhh-hheeeee
Confidence 3555555556554 34455555566666666666665332 45556666666666666652 222 11222 3666666
Q ss_pred ccccCCCCCCcccccCCCCCcEEEccCCcCccCCC--CCCCCCCcCEEEccCCCC
Q 004842 234 DNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQL 286 (728)
Q Consensus 234 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~--~l~~l~~L~~L~Ls~N~l 286 (728)
++|.++. -..+.++.+|+.||+++|-+.+.-. .+..+..|+.|+|.+|.+
T Consensus 240 rnN~l~t---L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 240 RNNALTT---LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred cccHHHh---hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 6666542 1234555666666666665554332 234445556666666655
No 423
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.30 E-value=1.7e-06 Score=85.09 Aligned_cols=83 Identities=20% Similarity=0.271 Sum_probs=66.0
Q ss_pred ceeccCceEEEEEEeCCCCEEEEEEcccCCh--------hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecC
Q 004842 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 631 ~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
.||+|+||.||+|.+ +|..|++|....... ...+.+.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999996 578899998643211 11245789999999999988777676777777789999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
++++|.+++...
T Consensus 80 ~g~~l~~~~~~~ 91 (199)
T TIGR03724 80 EGKPLKDVIEEG 91 (199)
T ss_pred CCccHHHHHhhc
Confidence 999999988653
No 424
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=98.27 E-value=1.2e-06 Score=95.83 Aligned_cols=88 Identities=25% Similarity=0.416 Sum_probs=73.7
Q ss_pred CcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCC-CC-----cccceeEEEEeCCeEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HR-----NLVSLVGYCDEEGEQML 697 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~-----niv~l~g~~~~~~~~~l 697 (728)
.|...++||+|.||+|.||. ...++.||||+++.... -.++-..|+.+|..++ |. |+|++++|+...+..+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 56778999999999999998 45689999999976422 1234567899999886 43 89999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 004842 698 VYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~ 714 (728)
|+|.++. +|.++|+..
T Consensus 266 VfELL~~-NLYellK~n 281 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNN 281 (586)
T ss_pred eehhhhh-hHHHHHHhc
Confidence 9999886 999999864
No 425
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=98.24 E-value=1.8e-06 Score=87.51 Aligned_cols=76 Identities=22% Similarity=0.227 Sum_probs=63.5
Q ss_pred cCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCHHHHHhc
Q 004842 635 GGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 635 G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~~ 713 (728)
|.||.||++.. .+++.||+|++.... ++.+|...+....||||+++++++...+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 89999999985 468899999997542 344566666667899999999999999999999999999999999876
Q ss_pred CC
Q 004842 714 IF 715 (728)
Q Consensus 714 ~~ 715 (728)
..
T Consensus 79 ~~ 80 (237)
T cd05576 79 FL 80 (237)
T ss_pred hc
Confidence 43
No 426
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.24 E-value=2.6e-06 Score=84.44 Aligned_cols=88 Identities=16% Similarity=0.060 Sum_probs=71.3
Q ss_pred cCCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHH---------HHHHHHHHHhcCCCCcccceeEEEEeC-
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEK---------EFLTEIQFLSRLHHRNLVSLVGYCDEE- 692 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~---------~f~~E~~~l~~l~H~niv~l~g~~~~~- 692 (728)
...|...+++|+|+||.||.... ++..+|||.++......++ .|.+|+..+.+++|++|.....+....
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 56788899999999999999765 5778999999754332222 268999999999999999999886532
Q ss_pred -------CeEEEEEecCCCCCHHHHH
Q 004842 693 -------GEQMLVYEFMSNGTLRDQL 711 (728)
Q Consensus 693 -------~~~~lV~Ey~~~GsL~~~L 711 (728)
+..++||||+++.+|.++.
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~ 134 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMP 134 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhh
Confidence 3578999999999998874
No 427
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.23 E-value=1.7e-06 Score=97.79 Aligned_cols=90 Identities=17% Similarity=0.260 Sum_probs=67.2
Q ss_pred cCCcccCCceeccCceEEEEEEeCC--CCEEEEEEcc--------------c---CChhcHHHHHHHHHHHhcCCCCccc
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQ--------------E---GSLQGEKEFLTEIQFLSRLHHRNLV 683 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~--g~~vAvK~l~--------------~---~~~~~~~~f~~E~~~l~~l~H~niv 683 (728)
..+|...+.||+|+||.||+|..+. +..+++|.+. . ......+.|.+|++++++++|+|||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 3578888999999999999987532 2222222110 0 0111234688999999999999999
Q ss_pred ceeEEEEeCCeEEEEEecCCCCCHHHHHhc
Q 004842 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 684 ~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~~ 713 (728)
++++++...+..++|+||+. ++|.+++..
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~ 255 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYD 255 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhh
Confidence 99999999999999999986 588888764
No 428
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.20 E-value=1.4e-06 Score=93.07 Aligned_cols=93 Identities=28% Similarity=0.391 Sum_probs=79.0
Q ss_pred CCcccCCceeccCceEEEEEEeCCCCEEEEEEcc--cCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEe
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQ--EGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~--~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E 700 (728)
+.|+..+.||+|+...||++.-.+.+.+|+|++. ..+.+....|.+|++.|.++ .|.+||+|++|-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 3466778999999999999998888899998874 34455567899999999999 58999999999999999999999
Q ss_pred cCCCCCHHHHHhcCCCc
Q 004842 701 FMSNGTLRDQLSGIFSV 717 (728)
Q Consensus 701 y~~~GsL~~~L~~~~~~ 717 (728)
|=+- ||.++|..+...
T Consensus 441 ~Gd~-DL~kiL~k~~~~ 456 (677)
T KOG0596|consen 441 CGDI-DLNKILKKKKSI 456 (677)
T ss_pred cccc-cHHHHHHhccCC
Confidence 8664 999999876543
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.19 E-value=4.4e-06 Score=95.21 Aligned_cols=88 Identities=20% Similarity=0.278 Sum_probs=67.9
Q ss_pred CCcccCCceeccCceEEEEEEeCCCCEEEEEE-cccC-Ch------hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKR-AQEG-SL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~-l~~~-~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 695 (728)
..|...+.||+|+||.||+|.+.+.. +++|+ .... .. ...+.+.+|++++..++|++++....++......
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 34456789999999999999975543 44443 2211 11 1124688999999999999999988888877788
Q ss_pred EEEEecCCCCCHHHHHh
Q 004842 696 MLVYEFMSNGTLRDQLS 712 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~ 712 (728)
++||||+++++|.+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~ 428 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE 428 (535)
T ss_pred EEEEEecCCCcHHHHHH
Confidence 99999999999999885
No 430
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.19 E-value=4.4e-06 Score=81.56 Aligned_cols=79 Identities=23% Similarity=0.199 Sum_probs=58.8
Q ss_pred CCceeccCceEEEEEEeCCCCEEEEEEcccCChh---------------------c-----HHHHHHHHHHHhcCCCCcc
Q 004842 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ---------------------G-----EKEFLTEIQFLSRLHHRNL 682 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~---------------------~-----~~~f~~E~~~l~~l~H~ni 682 (728)
...||+|+||+||+|...+|+.||||.++..... . ...+.+|.+.+.+++|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3579999999999999778999999998754211 0 1123578999999999998
Q ss_pred cceeEEEEeCCeEEEEEecCCCCCHHH
Q 004842 683 VSLVGYCDEEGEQMLVYEFMSNGTLRD 709 (728)
Q Consensus 683 v~l~g~~~~~~~~~lV~Ey~~~GsL~~ 709 (728)
.....+... ..++||||++++++..
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~ 106 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPA 106 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchh
Confidence 655554433 3489999999886543
No 431
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.18 E-value=9.7e-07 Score=95.37 Aligned_cols=105 Identities=14% Similarity=0.201 Sum_probs=83.9
Q ss_pred hcCCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcH---HHHHHHHHHHhcCCCCcccceeEEEEeCCeEEE
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~---~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 697 (728)
...-|.+.+.||-|+||+|..+. .+....+|+|.+++.+.-.+ .-..+|-.||.....+-||+|+-.+.+.+.+|.
T Consensus 627 dKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYF 706 (1034)
T KOG0608|consen 627 DKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYF 706 (1034)
T ss_pred cccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEE
Confidence 34568888999999999999887 44466789999977544322 235678889999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcCCCcccccccccc
Q 004842 698 VYEFMSNGTLRDQLSGIFSVIRHSGICFF 726 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~ 726 (728)
||||+++||+-..|.......++-+.+||
T Consensus 707 VMdYIPGGDmMSLLIrmgIFeE~LARFYI 735 (1034)
T KOG0608|consen 707 VMDYIPGGDMMSLLIRMGIFEEDLARFYI 735 (1034)
T ss_pred EEeccCCccHHHHHHHhccCHHHHHHHHH
Confidence 99999999999999887655554444443
No 432
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.18 E-value=1.1e-07 Score=92.79 Aligned_cols=138 Identities=18% Similarity=0.215 Sum_probs=65.2
Q ss_pred CCCCCCCCEEEeeccCCCCCCcHh----hhccCCCCEEEccCcccccc----ccc---------ccCCCCCCcEEECcCC
Q 004842 150 LGYLPKLDRIQIDQNYISGSLPKS----FANLNKTRHFHMNNNSISGQ----IPP---------ELSRLPSLVHMLLDNN 212 (728)
Q Consensus 150 ~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~~~----~p~---------~~~~l~~L~~L~L~~N 212 (728)
+.++|+|+..+|++|.+....|.. +++-+.|++|.|++|.+... +.. -...-|.|+.+....|
T Consensus 88 Llkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrN 167 (388)
T COG5238 88 LLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRN 167 (388)
T ss_pred HhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccc
Confidence 445666666666666665544433 34455666666666665321 111 1123355666666666
Q ss_pred CCCCCCCc----CCCCCCCCcEEEcccccCCCCCC----cccccCCCCCcEEEccCCcCccCCC-----CCCCCCCcCEE
Q 004842 213 NLTGYLPP----ELSELPKLLILQLDNNNFEGTTI----PASYSNMSKLLKLSLRNCSLQGPMP-----DLSRIPNLGYL 279 (728)
Q Consensus 213 ~l~~~~~~----~l~~l~~L~~L~L~~N~l~~~~~----p~~~~~l~~L~~L~L~~n~l~~~~~-----~l~~l~~L~~L 279 (728)
++..-... .+..-..|+.+.+..|.|.-..+ -..+..+.+|+.|||++|-++-.-. .+..++.|+.|
T Consensus 168 Rlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL 247 (388)
T COG5238 168 RLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLREL 247 (388)
T ss_pred hhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhc
Confidence 55421110 11111355566666655532000 0112334556666666665542211 23444555555
Q ss_pred EccCCCCc
Q 004842 280 DLSSNQLN 287 (728)
Q Consensus 280 ~Ls~N~l~ 287 (728)
.+.+|-++
T Consensus 248 ~lnDClls 255 (388)
T COG5238 248 RLNDCLLS 255 (388)
T ss_pred cccchhhc
Confidence 55555554
No 433
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.17 E-value=3.8e-07 Score=90.25 Aligned_cols=197 Identities=21% Similarity=0.224 Sum_probs=115.9
Q ss_pred eeEEECCCCCCccccC-ccc-cCCCCCCEEEccCCCCccC--CCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEE
Q 004842 84 LRELQLLNLNLSGNLS-PEI-GRLSYLTILDFMWNKISGS--IPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (728)
Q Consensus 84 l~~L~l~~~~l~~~~~-~~~-~~l~~L~~L~Ls~n~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 159 (728)
++-|.+.++.|....- ..| ...+.++.|||.+|.|+.. +..-+.+|+.|++|+|+.|.+...+-..-..+.+|+.|
T Consensus 47 ~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~l 126 (418)
T KOG2982|consen 47 LELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVL 126 (418)
T ss_pred hhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEE
Confidence 3345555555532211 122 3467788899999988742 22335688899999999998885444333566788889
Q ss_pred EeeccCCCCC-CcHhhhccCCCCEEEccCccccccc--cc----------ccCCCCCCcEEECcCCCCCCCCCcCCCCCC
Q 004842 160 QIDQNYISGS-LPKSFANLNKTRHFHMNNNSISGQI--PP----------ELSRLPSLVHMLLDNNNLTGYLPPELSELP 226 (728)
Q Consensus 160 ~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~--p~----------~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 226 (728)
.|.+..+.-. ....+..++.++.|.|+.|.+.... .. .+...+.+..+.++-|++.. -++
T Consensus 127 VLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r-------~Fp 199 (418)
T KOG2982|consen 127 VLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSR-------IFP 199 (418)
T ss_pred EEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHh-------hcc
Confidence 8888877532 2344567777888888887543111 00 11122233333333333332 235
Q ss_pred CCcEEEcccccCCCCCCcccccCCCCCcEEEccCCcCccCCC--CCCCCCCcCEEEccCCCCc
Q 004842 227 KLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQLN 287 (728)
Q Consensus 227 ~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~--~l~~l~~L~~L~Ls~N~l~ 287 (728)
++..+.+..|.+........+..++.+..|+|+.|++..... .+..++.|..|.+++|.+.
T Consensus 200 nv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 200 NVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred cchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 666666777766544444455566666677777776654333 4566666777777666665
No 434
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.15 E-value=2.7e-07 Score=89.87 Aligned_cols=88 Identities=20% Similarity=0.393 Sum_probs=72.3
Q ss_pred CCceeccCceEEEEEEeCCCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCC
Q 004842 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~Gs 706 (728)
..+|.+...|+.|+|.|. |.-+++|.+.-. .....++|-.|...++-+.||||.+++|.|.......++..|||.|+
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 356788899999999996 445556666432 22334689999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCc
Q 004842 707 LRDQLSGIFSV 717 (728)
Q Consensus 707 L~~~L~~~~~~ 717 (728)
|+..||+...+
T Consensus 274 lynvlhe~t~v 284 (448)
T KOG0195|consen 274 LYNVLHEQTSV 284 (448)
T ss_pred HHHHHhcCccE
Confidence 99999986543
No 435
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.13 E-value=5.8e-07 Score=93.74 Aligned_cols=92 Identities=26% Similarity=0.395 Sum_probs=77.8
Q ss_pred CCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
+.|..-++||+|+||.||-+..+ .|+.+|.|++.+.+. +.+.--.+|-.++.++..+.||.+--.+.+.+.+++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 45777799999999999999854 599999999865322 23345788999999999999999998899999999999
Q ss_pred ecCCCCCHHHHHhcCC
Q 004842 700 EFMSNGTLRDQLSGIF 715 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~ 715 (728)
..|.+|||.-+|...+
T Consensus 265 tlMNGGDLkfHiyn~g 280 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHG 280 (591)
T ss_pred EeecCCceeEEeeccC
Confidence 9999999999987654
No 436
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.11 E-value=8.9e-07 Score=102.68 Aligned_cols=79 Identities=29% Similarity=0.400 Sum_probs=61.9
Q ss_pred hcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
-..+|.+...+|+|+||.|||+.- -||+.||||++.... ........+|++++++++|||||+++....+.....-++
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 345677888999999999999983 379999999997543 222346789999999999999999998876655544444
Q ss_pred e
Q 004842 700 E 700 (728)
Q Consensus 700 E 700 (728)
|
T Consensus 557 e 557 (1351)
T KOG1035|consen 557 E 557 (1351)
T ss_pred c
Confidence 4
No 437
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.09 E-value=4.7e-08 Score=94.23 Aligned_cols=90 Identities=30% Similarity=0.456 Sum_probs=70.1
Q ss_pred cccCCceeccCceEEEEEEeC-CCCEEEEEEcccCC--hhcHHHHHHHHHHHhcCCCCcccceeEEEEeC--------Ce
Q 004842 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--------GE 694 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------~~ 694 (728)
|....+||+|.||.||+|..+ .|+.||+|++-... .+-...-.+|++++..++|+|++.++..|... ..
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 445578999999999999864 47789998764321 11123568999999999999999999998542 35
Q ss_pred EEEEEecCCCCCHHHHHhcCCC
Q 004842 695 QMLVYEFMSNGTLRDQLSGIFS 716 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~~~~ 716 (728)
.|+|+++|++ ||...|..+..
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~~v 119 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNRKV 119 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCccc
Confidence 8999999998 89999887643
No 438
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.09 E-value=8.2e-07 Score=86.62 Aligned_cols=80 Identities=29% Similarity=0.467 Sum_probs=65.4
Q ss_pred CCceeccCceEEEEEEe-CCCCEEEEEEcccCCh-hcHHHHHHHHHHHh-cCCCCcccceeEEEEeCCeEEEEEecCCCC
Q 004842 629 STQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLS-RLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~-~l~H~niv~l~g~~~~~~~~~lV~Ey~~~G 705 (728)
...||.|+||+|+|-.. +.|+..|||+++.... .+++.+..|.++.. .-+.||||+++|.+..++..|+-||.|+-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~- 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI- 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence 35799999999999875 4589999999986543 45567888887654 45889999999999999999999999975
Q ss_pred CHHH
Q 004842 706 TLRD 709 (728)
Q Consensus 706 sL~~ 709 (728)
+|+.
T Consensus 148 SlDk 151 (361)
T KOG1006|consen 148 SLDK 151 (361)
T ss_pred hHHH
Confidence 5443
No 439
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.09 E-value=1.1e-07 Score=83.42 Aligned_cols=135 Identities=21% Similarity=0.220 Sum_probs=90.5
Q ss_pred ceeEEECCCCCCcc--ccCccccCCCCCCEEEccCCCCccCCCcccc-CCCCCcEEeccCCcCCCcCCccCCCCCCCCEE
Q 004842 83 HLRELQLLNLNLSG--NLSPEIGRLSYLTILDFMWNKISGSIPKEIG-NIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (728)
Q Consensus 83 ~l~~L~l~~~~l~~--~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 159 (728)
.+..++|+.+.+.. ..+..+.....|+..+|++|.+. .+|..|. ..+.++.|+|++|.++ .+|+.++.++.|+.|
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 45667777776641 12234455667777899999888 5566554 4458888899999888 778888888889999
Q ss_pred EeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcC
Q 004842 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPE 221 (728)
Q Consensus 160 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 221 (728)
+++.|.+. ..|..+..|.+|-.|+..+|.+... |-.+-.-+..-..++.++.+.+.-+..
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ei-d~dl~~s~~~al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARAEI-DVDLFYSSLPALIKLGNEPLGDETKKK 165 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccccC-cHHHhccccHHHHHhcCCcccccCccc
Confidence 98888887 5566677788888888888877633 322322222223344566666554443
No 440
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.08 E-value=3.5e-06 Score=86.45 Aligned_cols=95 Identities=24% Similarity=0.400 Sum_probs=75.6
Q ss_pred HHHhhcCCcccCCceeccCceEEEEEEeCC------CCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCCcccceeEEEE
Q 004842 618 EMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690 (728)
Q Consensus 618 ~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 690 (728)
++......++...++-+|.||.||+|.|.+ .+.|-||.++.... -+..-|..|...+..+.|||+.++.|+|.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 444445567777889999999999997654 34466787765432 23356899999999999999999999997
Q ss_pred eC-CeEEEEEecCCCCCHHHHHh
Q 004842 691 EE-GEQMLVYEFMSNGTLRDQLS 712 (728)
Q Consensus 691 ~~-~~~~lV~Ey~~~GsL~~~L~ 712 (728)
++ +..+.+|.|+.-|+|..||.
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~ 380 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQ 380 (563)
T ss_pred eccCcceEEEeccCcchHHHHHH
Confidence 64 56799999999999999998
No 441
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.08 E-value=1.6e-07 Score=82.55 Aligned_cols=106 Identities=17% Similarity=0.209 Sum_probs=62.0
Q ss_pred CCEEEeeccCCCCCCcHhhhc---cCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEE
Q 004842 156 LDRIQIDQNYISGSLPKSFAN---LNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQ 232 (728)
Q Consensus 156 L~~L~L~~N~l~~~~p~~~~~---l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 232 (728)
+..++|+++.+- .+++...+ ...|+..+|++|.+....+..-...+.++.|+|++|+++ .+|.++..++.|+.|+
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 444555555553 23444333 334555567777666433332234456677777777776 4566677777777777
Q ss_pred cccccCCCCCCcccccCCCCCcEEEccCCcCcc
Q 004842 233 LDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 265 (728)
Q Consensus 233 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 265 (728)
++.|.+. ..|..+..+.++..|+..+|.+..
T Consensus 107 l~~N~l~--~~p~vi~~L~~l~~Lds~~na~~e 137 (177)
T KOG4579|consen 107 LRFNPLN--AEPRVIAPLIKLDMLDSPENARAE 137 (177)
T ss_pred cccCccc--cchHHHHHHHhHHHhcCCCCcccc
Confidence 7777765 456555556666666666666553
No 442
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.07 E-value=1e-06 Score=90.70 Aligned_cols=102 Identities=18% Similarity=0.259 Sum_probs=77.7
Q ss_pred cCCcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChhcHHH---HHHHHHHHhcC-CCCcccceeEEEEeCCeEEE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKE---FLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~---f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 697 (728)
..+|....+||+|+||.|..|+-++ .+.+|||+++..-.-+.++ -+.|-++++-- +-|.+|++..++.+.+.+|.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 3578888999999999999998654 5689999997653322222 34566777655 77899999999999999999
Q ss_pred EEecCCCCCHHHHHhcCCCcccccccc
Q 004842 698 VYEFMSNGTLRDQLSGIFSVIRHSGIC 724 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~~~~~~~~~~~ 724 (728)
||||+.+|+|--.++.-+..-+-.++.
T Consensus 428 VMEyvnGGDLMyhiQQ~GkFKEp~AvF 454 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGKFKEPVAVF 454 (683)
T ss_pred EEEEecCchhhhHHHHhcccCCchhhh
Confidence 999999999998887654444433333
No 443
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.01 E-value=8.1e-06 Score=58.16 Aligned_cols=38 Identities=45% Similarity=0.823 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHhCCC-CCCCCCCCCCC---CCCCCCcceEEcC
Q 004842 34 PIEVSALRSIKKSLVD-DYSKLSNWNRG---DPCTSNWTGVLCF 73 (728)
Q Consensus 34 ~~~~~~l~~~~~~~~~-~~~~l~~w~~~---~~C~~~w~gv~C~ 73 (728)
+.|++||++||+.+.. +.+.+.+|+.. +|| .|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C--~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPC--SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CC--CSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCe--eeccEEeC
Confidence 5789999999999994 66789999864 678 69999994
No 444
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.99 E-value=9.6e-07 Score=87.42 Aligned_cols=84 Identities=21% Similarity=0.344 Sum_probs=39.8
Q ss_pred CCCCCEEEeeccCCCC--CCcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCC-cCCCCCCCCc
Q 004842 153 LPKLDRIQIDQNYISG--SLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLL 229 (728)
Q Consensus 153 l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~ 229 (728)
.+.+++|||.+|.|+. .+-..+.+|+.|+.|+|+.|++...+...-..+.+|+.|.|.+..+..... ..+..+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 3456666666666653 222334456666666666666553332211234455555555544442211 1223344444
Q ss_pred EEEcccc
Q 004842 230 ILQLDNN 236 (728)
Q Consensus 230 ~L~L~~N 236 (728)
.|.++.|
T Consensus 150 elHmS~N 156 (418)
T KOG2982|consen 150 ELHMSDN 156 (418)
T ss_pred hhhhccc
Confidence 4444444
No 445
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=97.99 E-value=1.9e-05 Score=77.66 Aligned_cols=84 Identities=23% Similarity=0.233 Sum_probs=62.5
Q ss_pred CcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChh----------------------cHHHHHHHHHHHhcCCCCc-
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ----------------------GEKEFLTEIQFLSRLHHRN- 681 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~----------------------~~~~f~~E~~~l~~l~H~n- 681 (728)
.+...+.||+|+||.||++..++|+.||||+++..... ....+.+|...+.++.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 35667889999999999999888999999987543210 0123678899999998874
Q ss_pred -ccceeEEEEeCCeEEEEEecCCCCCHHHHHh
Q 004842 682 -LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS 712 (728)
Q Consensus 682 -iv~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~ 712 (728)
+.+.++ ....++||||+++++|.+...
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~ 123 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRV 123 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhccc
Confidence 444443 245689999999999877653
No 446
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.90 E-value=2.6e-06 Score=81.32 Aligned_cols=85 Identities=20% Similarity=0.490 Sum_probs=70.1
Q ss_pred cCCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCC-CCcccceeEEEEeC--CeEEEE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQMLV 698 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lV 698 (728)
.++|+..+++|+|.|++||.|. ..+.+.++||.++.- ..+...+|+.++..++ |||||+|++...++ ....||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 3467777899999999999998 567788999999753 3457889999999997 99999999998764 456899
Q ss_pred EecCCCCCHHHH
Q 004842 699 YEFMSNGTLRDQ 710 (728)
Q Consensus 699 ~Ey~~~GsL~~~ 710 (728)
+||+.|-|....
T Consensus 114 FE~v~n~Dfk~l 125 (338)
T KOG0668|consen 114 FEYVNNTDFKQL 125 (338)
T ss_pred hhhhccccHHHH
Confidence 999999775443
No 447
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=97.87 E-value=1.8e-07 Score=92.41 Aligned_cols=138 Identities=22% Similarity=0.265 Sum_probs=63.0
Q ss_pred CCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccc-cCCCCCCcccccCCCCCcEEEccCCcCccCCC--CCCC-CCC
Q 004842 200 RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNN-NFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP--DLSR-IPN 275 (728)
Q Consensus 200 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N-~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~--~l~~-l~~ 275 (728)
.+..|+.|.+.++++.+.+-..+.+-.+|+.|+++.. .++.......+.+++.|.+|+|+.|.+....- .+.. -++
T Consensus 208 ~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~ 287 (419)
T KOG2120|consen 208 QCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISET 287 (419)
T ss_pred HHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchh
Confidence 3344444444444444444444444444555554442 22211122235556666666666665543321 1111 145
Q ss_pred cCEEEccCCCCcccCCCCCc------cCCccEEEccCCC-CCCcCchhccCCccCceeecccccCcccCCcch
Q 004842 276 LGYLDLSSNQLNGSIPPGRL------SLNITTIKLSNNK-LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 341 (728)
Q Consensus 276 L~~L~Ls~N~l~~~ip~~~~------~~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~ 341 (728)
|+.|+|++..-. +..... .++|..|||++|. ++......|..++.|++|.++.+.. .+|+.+
T Consensus 288 l~~LNlsG~rrn--l~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~ 356 (419)
T KOG2120|consen 288 LTQLNLSGYRRN--LQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETL 356 (419)
T ss_pred hhhhhhhhhHhh--hhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcC--CChHHe
Confidence 566666554321 000000 1456666666553 3333334555666677766666653 344443
No 448
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.86 E-value=1e-05 Score=79.24 Aligned_cols=216 Identities=19% Similarity=0.258 Sum_probs=108.6
Q ss_pred ccCCCCCcEEeccCCcCCCc----CCccCCCCCCCCEEEeeccCCC---CCCcH-------hhhccCCCCEEEccCcccc
Q 004842 126 IGNIKSLELLLLNGNELTGS----LPEELGYLPKLDRIQIDQNYIS---GSLPK-------SFANLNKTRHFHMNNNSIS 191 (728)
Q Consensus 126 ~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~---~~~p~-------~~~~l~~L~~L~L~~N~l~ 191 (728)
+..+..++.++||+|.|... +...+.+-.+|+..++++-... ..+++ ++-++++|+..+|++|.|.
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg 105 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFG 105 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccC
Confidence 34467778888888887643 2333455566777766653221 12222 2345677777777777776
Q ss_pred cccccc----cCCCCCCcEEECcCCCCCCCCCcCC-------------CCCCCCcEEEcccccCCCCCCcccccCCCCCc
Q 004842 192 GQIPPE----LSRLPSLVHMLLDNNNLTGYLPPEL-------------SELPKLLILQLDNNNFEGTTIPASYSNMSKLL 254 (728)
Q Consensus 192 ~~~p~~----~~~l~~L~~L~L~~N~l~~~~~~~l-------------~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~ 254 (728)
...|.. +++-+.|.+|.|++|.+.-.--.-+ .+-|.|++.....|++.. .+.....
T Consensus 106 ~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlen--gs~~~~a----- 178 (388)
T COG5238 106 SEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLEN--GSKELSA----- 178 (388)
T ss_pred cccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhcc--CcHHHHH-----
Confidence 544433 3455677777777776541111111 122445555555555432 1111000
Q ss_pred EEEccCCcCccCCCCCCCCCCcCEEEccCCCCcccCCCC---------CccCCccEEEccCCCCCC----cCchhccCCc
Q 004842 255 KLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPG---------RLSLNITTIKLSNNKLTG----TIPSNFSGLP 321 (728)
Q Consensus 255 ~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~---------~~~~~L~~L~Ls~N~l~~----~~p~~~~~l~ 321 (728)
..+....+|+.+.+..|.|. |.+ +...+|+.|||.+|-++- .+...+..++
T Consensus 179 -------------~~l~sh~~lk~vki~qNgIr---pegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~ 242 (388)
T COG5238 179 -------------ALLESHENLKEVKIQQNGIR---PEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWN 242 (388)
T ss_pred -------------HHHHhhcCceeEEeeecCcC---cchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccc
Confidence 01222234444444444443 221 111455555555555542 2234555667
Q ss_pred cCceeecccccCcccCCcchhhh-ccCCCCCCcEEECcCCcCCC
Q 004842 322 RLQRLFIANNSLSGSIPSSIWQS-RTLNATETFILDFQNNNLTN 364 (728)
Q Consensus 322 ~L~~L~L~~N~l~~~ip~~~~~~-~~l~~~~L~~L~l~~N~l~~ 364 (728)
.|+.|.+..|-++...-.++... .....++|..|-+.+|...+
T Consensus 243 ~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~ 286 (388)
T COG5238 243 LLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRG 286 (388)
T ss_pred hhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcC
Confidence 77777777777765444433321 12245666666666666553
No 449
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.83 E-value=3.8e-06 Score=84.22 Aligned_cols=100 Identities=20% Similarity=0.272 Sum_probs=76.7
Q ss_pred cCCcccCCceeccCceEEEEEEeC-CCCEEEEEEcccCChhcH---HHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~---~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 697 (728)
..+|...++||+|+|+.|..+.++ ..+.+|+|++++.-.... +-...|-.++... +||.+|.+..|+.++..++.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 456888899999999999999864 478899999976422221 1234555555554 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhcCCCcccccc
Q 004842 698 VYEFMSNGTLRDQLSGIFSVIRHSG 722 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~~~~~~~~~ 722 (728)
|.||+++|+|--+++.++...++.+
T Consensus 329 vieyv~ggdlmfhmqrqrklpeeha 353 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRKLPEEHA 353 (593)
T ss_pred EEEEecCcceeeehhhhhcCcHHHh
Confidence 9999999999888877655554433
No 450
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.78 E-value=3e-05 Score=73.10 Aligned_cols=84 Identities=26% Similarity=0.324 Sum_probs=43.6
Q ss_pred CCCEEEccCcccccccccccCCCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEc
Q 004842 179 KTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSL 258 (728)
Q Consensus 179 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L 258 (728)
+...++|++|.+... ..|..++.|.+|.|.+|+|+..-|.--.-+++|+.|.|.+|.|....--.-+..+++|++|.+
T Consensus 43 ~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 445555666555422 245555666666666666664444433445556666666666543211223444555555555
Q ss_pred cCCcCc
Q 004842 259 RNCSLQ 264 (728)
Q Consensus 259 ~~n~l~ 264 (728)
-+|..+
T Consensus 121 l~Npv~ 126 (233)
T KOG1644|consen 121 LGNPVE 126 (233)
T ss_pred cCCchh
Confidence 555544
No 451
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=97.75 E-value=9.7e-06 Score=80.59 Aligned_cols=82 Identities=20% Similarity=0.244 Sum_probs=66.3
Q ss_pred CceeccCceEEEEEEeC-CCCEEEEEEcccCChhcHHHHHHHHHHHhc-CCCCcccceeEEEEe----CCeEEEEEecCC
Q 004842 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDE----EGEQMLVYEFMS 703 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~----~~~~~lV~Ey~~ 703 (728)
++||-|-.|.|..+..+ .|+.+|+|++.... .-.+|++.--. -.|||||.++++|.. ...+++|||+|+
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me 142 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME 142 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcCH-----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence 68999999999999854 58899999997642 34477776444 479999999999853 456899999999
Q ss_pred CCCHHHHHhcCCC
Q 004842 704 NGTLRDQLSGIFS 716 (728)
Q Consensus 704 ~GsL~~~L~~~~~ 716 (728)
+|+|+..+.+++.
T Consensus 143 GGeLfsriq~~g~ 155 (400)
T KOG0604|consen 143 GGELFSRIQDRGD 155 (400)
T ss_pred chHHHHHHHHccc
Confidence 9999999987653
No 452
>smart00090 RIO RIO-like kinase.
Probab=97.74 E-value=5.1e-05 Score=76.65 Aligned_cols=83 Identities=23% Similarity=0.232 Sum_probs=60.7
Q ss_pred CcccCCceeccCceEEEEEE--eCCCCEEEEEEcccCChh------------------------cHHHHHHHHHHHhcCC
Q 004842 625 NFNSSTQIGQGGYGKVYKGI--LPDGTVVAVKRAQEGSLQ------------------------GEKEFLTEIQFLSRLH 678 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~--~~~g~~vAvK~l~~~~~~------------------------~~~~f~~E~~~l~~l~ 678 (728)
.|...+.||+|+||.||+|. ..+|+.||||.++..... ....+.+|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46677899999999999998 568999999998643210 0123568999999997
Q ss_pred CCc--ccceeEEEEeCCeEEEEEecCCCCCHHHHH
Q 004842 679 HRN--LVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 711 (728)
Q Consensus 679 H~n--iv~l~g~~~~~~~~~lV~Ey~~~GsL~~~L 711 (728)
|.. +.+.+++ ...++||||+++++|..+.
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~ 139 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPR 139 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccc
Confidence 643 3333432 2358999999999887765
No 453
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=97.73 E-value=4.9e-05 Score=86.83 Aligned_cols=89 Identities=24% Similarity=0.356 Sum_probs=59.9
Q ss_pred hcCCcccCCceeccCceEEEEEEeC-C----CCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEE------EE
Q 004842 622 ATNNFNSSTQIGQGGYGKVYKGILP-D----GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY------CD 690 (728)
Q Consensus 622 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~----g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~------~~ 690 (728)
..++|...+.||+|+||.||+|... + +..||||++..... .+.+..| .+....+.+++.++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4578889999999999999999964 4 68999999864321 1222222 1222222333222211 23
Q ss_pred eCCeEEEEEecCCCCCHHHHHhcC
Q 004842 691 EEGEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 691 ~~~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
.....++||||+++|+|.++++..
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~ 229 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSK 229 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhc
Confidence 456799999999999999999754
No 454
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.73 E-value=2.4e-06 Score=83.45 Aligned_cols=88 Identities=26% Similarity=0.399 Sum_probs=69.4
Q ss_pred cccCCceeccCceEEEEEEe-CCCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeC-----CeEEE
Q 004842 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQML 697 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~~l 697 (728)
.+.++-||-|+||.||..+- ++|+.||.|++..- .....+.|.+|++++..++|.|+...++.-... ++.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 44668899999999998874 56999999998542 223456789999999999999999999876543 35688
Q ss_pred EEecCCCCCHHHHHhcC
Q 004842 698 VYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~ 714 (728)
|+|.|.. ||++.+-..
T Consensus 135 ~TELmQS-DLHKIIVSP 150 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIVSP 150 (449)
T ss_pred HHHHHHh-hhhheeccC
Confidence 9998865 888877653
No 455
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.71 E-value=0.00021 Score=76.29 Aligned_cols=57 Identities=16% Similarity=0.172 Sum_probs=30.0
Q ss_pred ccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeecc
Q 004842 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (728)
Q Consensus 102 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 164 (728)
+..+.+++.|++++|.++ .+|. + ..+|++|.++++.-...+|+.+. ++|+.|++++|
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~-L--P~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~C 104 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV-L--PNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHC 104 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC-C--CCCCcEEEccCCCCcccCCchhh--hhhhheEccCc
Confidence 445677888888887766 4452 1 23577777765433224443221 24444444444
No 456
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=97.67 E-value=6.7e-05 Score=69.45 Aligned_cols=77 Identities=17% Similarity=0.150 Sum_probs=64.7
Q ss_pred CCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCC--CcccceeEEEEeCCeEEEEEecCCCCC
Q 004842 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~Ey~~~Gs 706 (728)
.+.||+|.++.||++...+ ..++||....... ..++.+|+..+..++| ..+.+++++....+..++++||++++.
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 4678999999999999754 7899999866433 4578999999999977 589999988877788999999999987
Q ss_pred HH
Q 004842 707 LR 708 (728)
Q Consensus 707 L~ 708 (728)
+.
T Consensus 80 ~~ 81 (155)
T cd05120 80 LD 81 (155)
T ss_pred cc
Confidence 75
No 457
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.67 E-value=7.7e-05 Score=70.42 Aligned_cols=103 Identities=24% Similarity=0.274 Sum_probs=48.5
Q ss_pred CCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccCccccccc-ccccCCCCCCcEEEC
Q 004842 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI-PPELSRLPSLVHMLL 209 (728)
Q Consensus 131 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L 209 (728)
+...+||++|.+... +.|..+++|.+|.|.+|+|+.+.|..-.-+++|+.|.|.+|.|.... -..+..++.|++|.+
T Consensus 43 ~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 344555555555421 23445555555555555555555544444555555555555543211 012344555555555
Q ss_pred cCCCCCCCC---CcCCCCCCCCcEEEccc
Q 004842 210 DNNNLTGYL---PPELSELPKLLILQLDN 235 (728)
Q Consensus 210 ~~N~l~~~~---~~~l~~l~~L~~L~L~~ 235 (728)
-+|.++..- --.+..+|+|+.||+..
T Consensus 121 l~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 121 LGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred cCCchhcccCceeEEEEecCcceEeehhh
Confidence 555554221 11233445555555443
No 458
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=97.65 E-value=3.6e-05 Score=86.48 Aligned_cols=85 Identities=26% Similarity=0.358 Sum_probs=70.0
Q ss_pred CcccCCceeccCceE-EEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEecC
Q 004842 625 NFNSSTQIGQGGYGK-VYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFM 702 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~ 702 (728)
-|...+++|.|+-|+ ||+|.+ +|+.||||++-... ..-..+|+..++.- +|||||+++|.-.+++..||..|.|
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 456677899999886 799999 68999999985432 12345899988877 7999999998888889999999999
Q ss_pred CCCCHHHHHhcC
Q 004842 703 SNGTLRDQLSGI 714 (728)
Q Consensus 703 ~~GsL~~~L~~~ 714 (728)
.- +|.|++...
T Consensus 586 ~~-sL~dlie~~ 596 (903)
T KOG1027|consen 586 AC-SLQDLIESS 596 (903)
T ss_pred hh-hHHHHHhcc
Confidence 75 999999874
No 459
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.64 E-value=0.00016 Score=77.15 Aligned_cols=130 Identities=20% Similarity=0.264 Sum_probs=77.2
Q ss_pred cceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCC-cCCCcCCccCCCCCCCCEEE
Q 004842 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGN-ELTGSLPEELGYLPKLDRIQ 160 (728)
Q Consensus 82 ~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~ 160 (728)
.+++.|++++|+++. +| .+ ..+|++|+++++.-...+|..+ .++|++|++++| .+. .+|+ .|+.|+
T Consensus 52 ~~l~~L~Is~c~L~s-LP-~L--P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sLP~------sLe~L~ 118 (426)
T PRK15386 52 RASGRLYIKDCDIES-LP-VL--PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GLPE------SVRSLE 118 (426)
T ss_pred cCCCEEEeCCCCCcc-cC-CC--CCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-cccc------ccceEE
Confidence 578999999998864 34 22 2469999999865545777655 368999999998 554 4553 477788
Q ss_pred eeccCCC--CCCcHhhhccCCCCEEEccCcccc--cccccccCCC-CCCcEEECcCCCCCCCCCcCCCCCCCCcEEEccc
Q 004842 161 IDQNYIS--GSLPKSFANLNKTRHFHMNNNSIS--GQIPPELSRL-PSLVHMLLDNNNLTGYLPPELSELPKLLILQLDN 235 (728)
Q Consensus 161 L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 235 (728)
+..+... +.+|. +|+.|.+.+++.. ..+|. .+ ++|++|++++|... ..|+.+- .+|+.|+++.
T Consensus 119 L~~n~~~~L~~LPs------sLk~L~I~~~n~~~~~~lp~---~LPsSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls~ 186 (426)
T PRK15386 119 IKGSATDSIKNVPN------GLTSLSINSYNPENQARIDN---LISPSLKTLSLTGCSNI-ILPEKLP--ESLQSITLHI 186 (426)
T ss_pred eCCCCCcccccCcc------hHhheecccccccccccccc---ccCCcccEEEecCCCcc-cCccccc--ccCcEEEecc
Confidence 7766543 12332 3555555432211 01111 12 46777777766644 2333222 3566666655
Q ss_pred c
Q 004842 236 N 236 (728)
Q Consensus 236 N 236 (728)
+
T Consensus 187 n 187 (426)
T PRK15386 187 E 187 (426)
T ss_pred c
Confidence 4
No 460
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=97.62 E-value=1.1e-06 Score=86.93 Aligned_cols=176 Identities=18% Similarity=0.223 Sum_probs=120.6
Q ss_pred CCCEEEccCCCCccCC-CccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccC-CCCC-CcHhhhccCCCCEE
Q 004842 107 YLTILDFMWNKISGSI-PKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY-ISGS-LPKSFANLNKTRHF 183 (728)
Q Consensus 107 ~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~-~p~~~~~l~~L~~L 183 (728)
.|++||||+..|+..- -.-+..+.+|+.|.|.++++...+-..+++-.+|+.|+|+.+. ++.. ..-.+.+++.|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 5888999888876321 2235678889999999999988888888888899999998764 2211 12245688899999
Q ss_pred EccCcccccccccc-cCC-CCCCcEEECcCCCCC--CC-CCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEc
Q 004842 184 HMNNNSISGQIPPE-LSR-LPSLVHMLLDNNNLT--GY-LPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSL 258 (728)
Q Consensus 184 ~L~~N~l~~~~p~~-~~~-l~~L~~L~L~~N~l~--~~-~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L 258 (728)
+|+.+.+....... ... -++|+.|+|+++.=. .. +.--...+++|..|||+.|..-.-..-..|.+++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 99988875433221 111 257888888876421 11 11122457899999998876422133446778889999999
Q ss_pred cCCcCccCCC----CCCCCCCcCEEEccCC
Q 004842 259 RNCSLQGPMP----DLSRIPNLGYLDLSSN 284 (728)
Q Consensus 259 ~~n~l~~~~~----~l~~l~~L~~L~Ls~N 284 (728)
+.|-. ++| .+...|.|.+||+.++
T Consensus 346 sRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 346 SRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 98864 344 5788899999998764
No 461
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.56 E-value=8.1e-05 Score=82.16 Aligned_cols=85 Identities=22% Similarity=0.207 Sum_probs=59.0
Q ss_pred CCceeccCceEEEEEEeCCCCEEEEEEcccCChhc----------------------------------------HHHHH
Q 004842 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG----------------------------------------EKEFL 668 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~----------------------------------------~~~f~ 668 (728)
.+.||.|++|+||+|++++|+.||||+.+.+.... +-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36799999999999999999999999986542110 01356
Q ss_pred HHHHHHhcC----CCCcccceeEEEEe-CCeEEEEEecCCCCCHHHHHhc
Q 004842 669 TEIQFLSRL----HHRNLVSLVGYCDE-EGEQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 669 ~E~~~l~~l----~H~niv~l~g~~~~-~~~~~lV~Ey~~~GsL~~~L~~ 713 (728)
+|++.+.++ +|.+-|.+-.+|.+ .+..+|||||+++++|.++...
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~ 251 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAAL 251 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHH
Confidence 677666655 23333333333322 3457999999999999888653
No 462
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=97.55 E-value=7e-05 Score=78.12 Aligned_cols=92 Identities=24% Similarity=0.422 Sum_probs=76.5
Q ss_pred HhhcCCcccCCceeccCceEEEEEEeC----CCCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCe
Q 004842 620 ALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 694 (728)
Q Consensus 620 ~~~~~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 694 (728)
....+.|...++||+|.|+.||++... ....||+|.+..... .....+|++.+..+ -|.||+++.++....+.
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 344456788899999999999999843 356899999976432 23578999999999 58999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhc
Q 004842 695 QMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 695 ~~lV~Ey~~~GsL~~~L~~ 713 (728)
..+|+||+++-+-.++..+
T Consensus 110 v~ivlp~~~H~~f~~l~~~ 128 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS 128 (418)
T ss_pred eEEEecccCccCHHHHHhc
Confidence 9999999999888888765
No 463
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.55 E-value=8.2e-05 Score=53.13 Aligned_cols=36 Identities=42% Similarity=0.757 Sum_probs=25.6
Q ss_pred CccEEEccCCCCCCcCchhccCCccCceeecccccCc
Q 004842 298 NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (728)
Q Consensus 298 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (728)
+|++|++++|+|+ .+|..+++|++|+.|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 5777777777777 34556778888888888888777
No 464
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.54 E-value=0.00026 Score=74.16 Aligned_cols=89 Identities=12% Similarity=0.206 Sum_probs=58.7
Q ss_pred CCcccCCceeccCceEEEEEEeCCC----CEEEEEEcccCChh--c---------HHHHHHHHHHHhcCCCCcccceeEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQ--G---------EKEFLTEIQFLSRLHHRNLVSLVGY 688 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g----~~vAvK~l~~~~~~--~---------~~~f~~E~~~l~~l~H~niv~l~g~ 688 (728)
..|...++||+|+||.||+|...+. ..+|+|........ . ......+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 4677889999999999999996543 45666654322111 0 1123344455677899999999998
Q ss_pred EEeCC----eEEEEEecCCCCCHHHHHhc
Q 004842 689 CDEEG----EQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 689 ~~~~~----~~~lV~Ey~~~GsL~~~L~~ 713 (728)
+.... ..++++|++.. ++.+.+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 119 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKR 119 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHh
Confidence 76543 34778887654 56555543
No 465
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=97.37 E-value=0.00011 Score=72.36 Aligned_cols=89 Identities=19% Similarity=0.377 Sum_probs=71.2
Q ss_pred CcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEE-EEeCCeEEEEEec
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGY-CDEEGEQMLVYEF 701 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~-~~~~~~~~lV~Ey 701 (728)
.|+..+.+|+|.||.+-.++.+. .+.+++|.++... ...++|.+|...--.+ .|.|||.-++. +...+....++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 46677899999999999999754 6789999997643 3467999998766566 68999987765 4556788899999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
+|.|||..-+...
T Consensus 104 aP~gdL~snv~~~ 116 (378)
T KOG1345|consen 104 APRGDLRSNVEAA 116 (378)
T ss_pred CccchhhhhcCcc
Confidence 9999999887653
No 466
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=97.34 E-value=0.00014 Score=68.79 Aligned_cols=88 Identities=25% Similarity=0.388 Sum_probs=68.7
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCC-hhcHHHHHHHHHHHh-cCCCCcccceeEEEEeCCeEEEEEe
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLS-RLHHRNLVSLVGYCDEEGEQMLVYE 700 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~-~l~H~niv~l~g~~~~~~~~~lV~E 700 (728)
++......||+|+||.|-+-.+ ..|+..|||++...- .+.++....|+.+.. ....|.+|.++|.+.+....|+-||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 3444556799999999877663 569999999997643 344567888887755 4588999999999999999999999
Q ss_pred cCCCCCHHHHHh
Q 004842 701 FMSNGTLRDQLS 712 (728)
Q Consensus 701 y~~~GsL~~~L~ 712 (728)
-|+- +|+.+-+
T Consensus 126 ~M~t-Sldkfy~ 136 (282)
T KOG0984|consen 126 LMDT-SLDKFYR 136 (282)
T ss_pred Hhhh-hHHHHHH
Confidence 9986 6766543
No 467
>PRK12274 serine/threonine protein kinase; Provisional
Probab=97.33 E-value=0.0008 Score=65.61 Aligned_cols=80 Identities=8% Similarity=0.032 Sum_probs=61.2
Q ss_pred ccCCceeccCceEEEEEEeCCCCEEEEEEcccCChh----cHHHHHHHHHHHhcCC-CCcccceeEEEEeCCeEEEEEec
Q 004842 627 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ----GEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 627 ~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~----~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
.....+++|+||+||.+.- ++..++.+.+.....- ...-|.+|+++|.++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3457899999999996655 5777887777654321 1224789999999995 4889999886 346999999
Q ss_pred CCCCCHHHHH
Q 004842 702 MSNGTLRDQL 711 (728)
Q Consensus 702 ~~~GsL~~~L 711 (728)
+++++|.+.+
T Consensus 80 I~G~~L~~~~ 89 (218)
T PRK12274 80 LAGAAMYQRP 89 (218)
T ss_pred ecCccHHhhh
Confidence 9999997765
No 468
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.27 E-value=0.00046 Score=77.33 Aligned_cols=86 Identities=21% Similarity=0.249 Sum_probs=60.1
Q ss_pred CCcccCCceeccCceEEEEEEeCC-CCEEEEEEcccCChh----------------------------------------
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ---------------------------------------- 662 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~---------------------------------------- 662 (728)
..|+. +-+|+|++|+||+|.+++ |+.||||+++.+...
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 689999999999999987 999999999754210
Q ss_pred cHHHHHHHHHHHhcCC----CCcccceeEEEEe-CCeEEEEEecCCCCCHHHH
Q 004842 663 GEKEFLTEIQFLSRLH----HRNLVSLVGYCDE-EGEQMLVYEFMSNGTLRDQ 710 (728)
Q Consensus 663 ~~~~f~~E~~~l~~l~----H~niv~l~g~~~~-~~~~~lV~Ey~~~GsL~~~ 710 (728)
.+-+|.+|+.-+.+++ +.+.|.+-.++.+ ....+|||||++++.+.++
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~ 251 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV 251 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH
Confidence 0113566666665553 4444444444433 3567899999999999874
No 469
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.26 E-value=0.00012 Score=80.27 Aligned_cols=90 Identities=20% Similarity=0.276 Sum_probs=71.8
Q ss_pred CCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEec
Q 004842 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
..|.....+|.|+|+.|-++.. ++++..|||.+.... .+-.+|+.++... .||||+++.+.|.+....|+|||+
T Consensus 322 ~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~ 397 (612)
T KOG0603|consen 322 ESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL 397 (612)
T ss_pred hhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence 3444556699999999999884 557889999997652 2334677666655 899999999999999999999999
Q ss_pred CCCCCHHHHHhcCCCc
Q 004842 702 MSNGTLRDQLSGIFSV 717 (728)
Q Consensus 702 ~~~GsL~~~L~~~~~~ 717 (728)
+.+|.+.+.+......
T Consensus 398 l~g~ell~ri~~~~~~ 413 (612)
T KOG0603|consen 398 LDGGELLRRIRSKPEF 413 (612)
T ss_pred ccccHHHHHHHhcchh
Confidence 9999999988865543
No 470
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=97.25 E-value=0.00062 Score=65.98 Aligned_cols=74 Identities=28% Similarity=0.364 Sum_probs=49.7
Q ss_pred CCceeccCceEEEEEEeCCCCEEEEEEcccCChh--cHHH----------------------HHHHHHHHhcCCCCc--c
Q 004842 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKE----------------------FLTEIQFLSRLHHRN--L 682 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~----------------------f~~E~~~l~~l~H~n--i 682 (728)
.+.||+|+||.||+|...+|+.||||+++..... .... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 3679999999999999878999999988653211 1111 135666666665443 3
Q ss_pred cceeEEEEeCCeEEEEEecCCCCC
Q 004842 683 VSLVGYCDEEGEQMLVYEFMSNGT 706 (728)
Q Consensus 683 v~l~g~~~~~~~~~lV~Ey~~~Gs 706 (728)
.+.+++ ...++||||+++|.
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~ 101 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDG 101 (187)
T ss_pred CceEec----CCCEEEEEEeCCCC
Confidence 444433 34689999999953
No 471
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.18 E-value=0.00091 Score=60.40 Aligned_cols=58 Identities=21% Similarity=0.149 Sum_probs=19.3
Q ss_pred ccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEe
Q 004842 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (728)
Q Consensus 102 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 161 (728)
|.+.++|+.+.+.. .+..+....|.++++|+.+.+..+ +.......|.++++|+.+.+
T Consensus 8 F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~ 65 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITF 65 (129)
T ss_dssp TTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEE
T ss_pred HhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccc
Confidence 34444444444442 233333334444444444444432 33233333444444444444
No 472
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=97.16 E-value=0.002 Score=67.60 Aligned_cols=87 Identities=33% Similarity=0.566 Sum_probs=73.3
Q ss_pred cccCCceeccCceEEEEEEeCCCCEEEEEEcccCChh---cHHHHHHHHHHHhcCCCC-cccceeEEEEeCCeEEEEEec
Q 004842 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHR-NLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 626 ~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lV~Ey 701 (728)
|.....+|.|+||.||++... ..+|+|.+...... ....|.+|+.+++.+.|+ +++++..++......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 445678999999999999976 78899998764332 256799999999999988 799999999777778999999
Q ss_pred CCCCCHHHHHhcC
Q 004842 702 MSNGTLRDQLSGI 714 (728)
Q Consensus 702 ~~~GsL~~~L~~~ 714 (728)
+.++++.+++...
T Consensus 80 ~~~~~l~~~~~~~ 92 (384)
T COG0515 80 VDGGSLEDLLKKI 92 (384)
T ss_pred CCCCcHHHHHHhc
Confidence 9999999887764
No 473
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.09 E-value=0.0007 Score=71.99 Aligned_cols=89 Identities=17% Similarity=0.310 Sum_probs=69.6
Q ss_pred CCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCC-----C---CcccceeEEEEe---
Q 004842 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----H---RNLVSLVGYCDE--- 691 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----H---~niv~l~g~~~~--- 691 (728)
..|...+++|=|.|.+||.+. ....+.||+|+.+..... .+.-+.||+++++++ | ..||+|++.+..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY-tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY-TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH-HHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 457788999999999999997 445778999999765332 245788999999873 2 369999999854
Q ss_pred -CCeEEEEEecCCCCCHHHHHhcC
Q 004842 692 -EGEQMLVYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 692 -~~~~~lV~Ey~~~GsL~~~L~~~ 714 (728)
+...+||+||+-. +|..+|...
T Consensus 157 NG~HVCMVfEvLGd-nLLklI~~s 179 (590)
T KOG1290|consen 157 NGQHVCMVFEVLGD-NLLKLIKYS 179 (590)
T ss_pred CCcEEEEEehhhhh-HHHHHHHHh
Confidence 4578999999854 788888754
No 474
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=97.09 E-value=3.7e-05 Score=81.61 Aligned_cols=96 Identities=16% Similarity=0.197 Sum_probs=77.3
Q ss_pred CCcccCCceeccCceEEEEEEeCCCC-EEEEEEcccCCh---hcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEE
Q 004842 624 NNFNSSTQIGQGGYGKVYKGILPDGT-VVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~~~~g~-~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 699 (728)
.++.....+|-|+||.|-........ .+|+|.+++... ..++-...|-.+|...+.+.||+++-.+.+..+.|++|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 34555678999999999988865433 489998876432 22334778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcCCCccc
Q 004842 700 EFMSNGTLRDQLSGIFSVIR 719 (728)
Q Consensus 700 Ey~~~GsL~~~L~~~~~~~~ 719 (728)
|-|-+|+|...|+++....+
T Consensus 500 EaClGGElWTiLrdRg~Fdd 519 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGSFDD 519 (732)
T ss_pred HhhcCchhhhhhhhcCCccc
Confidence 99999999999998765443
No 475
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.08 E-value=0.0003 Score=81.32 Aligned_cols=61 Identities=23% Similarity=0.334 Sum_probs=24.4
Q ss_pred CCCCCcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCCcEEEccCCc
Q 004842 200 RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCS 262 (728)
Q Consensus 200 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~ 262 (728)
++++|..||+++.+++.. ..++.+++|+.|.+.+=.+.....-..+.++++|+.||+|..+
T Consensus 171 sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~ 231 (699)
T KOG3665|consen 171 SFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDK 231 (699)
T ss_pred ccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCeeeccccc
Confidence 344444444444444422 2334444444444444333211111223334444444444433
No 476
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.08 E-value=0.0015 Score=59.00 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=59.8
Q ss_pred ccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCCCEEEccCcccccccccccCCCCC
Q 004842 124 KEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPS 203 (728)
Q Consensus 124 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 203 (728)
..|.++++|+.+.+.. .+.......|.++++|+.+.+..+ +..+....|.++.+|+.+.+.+ .+.......|..+++
T Consensus 6 ~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~ 82 (129)
T PF13306_consen 6 NAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTN 82 (129)
T ss_dssp TTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TT
T ss_pred HHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccc
Confidence 4577777888888764 566566667777777888887764 6655566677777777777765 333334455666777
Q ss_pred CcEEECcCCCCCCCCCcCCCCCCCCcEEEcccccCCCCCCcccccCCCCC
Q 004842 204 LVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKL 253 (728)
Q Consensus 204 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L 253 (728)
|+.+++..+ +.......|.+. +|+.+.+.. .+.. .-...|.++++|
T Consensus 83 l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~-i~~~~F~~~~~l 128 (129)
T PF13306_consen 83 LKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITK-IEENAFKNCTKL 128 (129)
T ss_dssp ECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS-----GGG-----
T ss_pred ccccccCcc-ccEEchhhhcCC-CceEEEECC-CccE-ECCccccccccC
Confidence 777777654 443444455555 677776665 2221 223445555544
No 477
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=97.05 E-value=0.00023 Score=70.10 Aligned_cols=84 Identities=23% Similarity=0.398 Sum_probs=65.6
Q ss_pred CCceeccCceEEEEEEeC-CCCEEEEEEcccCC-hhcHHHHHHHHHHHhcCC-CCcccceeEEEEeCCeEEEEEecCCCC
Q 004842 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~G 705 (728)
...+|.|..|+|+++..+ .|..+|||.+.... ..+.+.....+.++.+-+ .|.||+.+||+..+...++-||.|.-
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~- 175 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST- 175 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-
Confidence 356899999999999965 48899999997653 333456777777777664 79999999999999999999998864
Q ss_pred CHHHHHhc
Q 004842 706 TLRDQLSG 713 (728)
Q Consensus 706 sL~~~L~~ 713 (728)
..++.|+.
T Consensus 176 C~ekLlkr 183 (391)
T KOG0983|consen 176 CAEKLLKR 183 (391)
T ss_pred HHHHHHHH
Confidence 34444443
No 478
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=96.99 E-value=0.00016 Score=83.59 Aligned_cols=111 Identities=20% Similarity=0.256 Sum_probs=55.3
Q ss_pred CCCCCEEEeeccCCCCC-CcHhhhccCCCCEEEccCcccccccccccCCCCCCcEEECcCCCCCC-CCCcCCCCCCCCcE
Q 004842 153 LPKLDRIQIDQNYISGS-LPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG-YLPPELSELPKLLI 230 (728)
Q Consensus 153 l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~ 230 (728)
+|.|+.|.+.+=.+... .-....++++|..||+++.+++.. ..++.+++|+.|.+.+=.+.. ..-..+.+|++|+.
T Consensus 147 LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~v 224 (699)
T KOG3665|consen 147 LPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRV 224 (699)
T ss_pred CcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCe
Confidence 45555555555443211 122233555555555555555433 345555666665555544432 12224555666666
Q ss_pred EEcccccCCCCC-Cc----ccccCCCCCcEEEccCCcCcc
Q 004842 231 LQLDNNNFEGTT-IP----ASYSNMSKLLKLSLRNCSLQG 265 (728)
Q Consensus 231 L~L~~N~l~~~~-~p----~~~~~l~~L~~L~L~~n~l~~ 265 (728)
||+|........ +. +.-..+|+|+.||.++..+.+
T Consensus 225 LDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~ 264 (699)
T KOG3665|consen 225 LDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINE 264 (699)
T ss_pred eeccccccccchHHHHHHHHhcccCccccEEecCCcchhH
Confidence 666665543211 00 122346677777777666654
No 479
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.92 E-value=0.00038 Score=68.67 Aligned_cols=39 Identities=31% Similarity=0.518 Sum_probs=17.3
Q ss_pred CCCCCcEEECcCC--CCCCCCCcCCCCCCCCcEEEcccccC
Q 004842 200 RLPSLVHMLLDNN--NLTGYLPPELSELPKLLILQLDNNNF 238 (728)
Q Consensus 200 ~l~~L~~L~L~~N--~l~~~~~~~l~~l~~L~~L~L~~N~l 238 (728)
.|++|+.|.++.| ++.+.++.....+++|++|++++|++
T Consensus 63 ~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki 103 (260)
T KOG2739|consen 63 KLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKI 103 (260)
T ss_pred CcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcc
Confidence 3444444455444 33333333333335555555555554
No 480
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.83 E-value=0.00075 Score=79.38 Aligned_cols=91 Identities=27% Similarity=0.424 Sum_probs=66.5
Q ss_pred hhcCCcccCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCC---CCcccceeEEEEeCCeEEE
Q 004842 621 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQML 697 (728)
Q Consensus 621 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~l 697 (728)
.....|...+.||+|+||.||+|.-.+|+.||+|.-+....- +|.--.+++.+++ -+-|..+..++.-.+.-+|
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 334567778899999999999999888999999988664322 3333334555555 1234455555566778899
Q ss_pred EEecCCCCCHHHHHhcC
Q 004842 698 VYEFMSNGTLRDQLSGI 714 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~~ 714 (728)
|+||.+.|+|.|++...
T Consensus 772 v~ey~~~Gtlld~~N~~ 788 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLINTN 788 (974)
T ss_pred eeeccccccHHHhhccC
Confidence 99999999999999854
No 481
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=96.83 E-value=0.0044 Score=62.68 Aligned_cols=85 Identities=16% Similarity=0.200 Sum_probs=62.7
Q ss_pred CCcee-ccCceEEEEEEeCCCCEEEEEEcccCCh-------------hcHHHHHHHHHHHhcCCCCcc--cceeEEEEeC
Q 004842 629 STQIG-QGGYGKVYKGILPDGTVVAVKRAQEGSL-------------QGEKEFLTEIQFLSRLHHRNL--VSLVGYCDEE 692 (728)
Q Consensus 629 ~~~iG-~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~ni--v~l~g~~~~~ 692 (728)
..+|| .|+.|+||+.+.. +..++||+...... .....+.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999874 67889998753211 122457889999999999885 6777775432
Q ss_pred C-e---EEEEEecCCC-CCHHHHHhcC
Q 004842 693 G-E---QMLVYEFMSN-GTLRDQLSGI 714 (728)
Q Consensus 693 ~-~---~~lV~Ey~~~-GsL~~~L~~~ 714 (728)
. . .++|+||+++ ++|.+++...
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~ 141 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA 141 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC
Confidence 2 2 3599999997 6999988653
No 482
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.66 E-value=0.001 Score=65.67 Aligned_cols=83 Identities=22% Similarity=0.353 Sum_probs=43.3
Q ss_pred CcceeEEECCCCCCccccCccccCCCCCCEEEccCC--CCccCCCccccCCCCCcEEeccCCcCCCcCCcc---CCCCCC
Q 004842 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWN--KISGSIPKEIGNIKSLELLLLNGNELTGSLPEE---LGYLPK 155 (728)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n--~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~ 155 (728)
+..++.|.+.+..++.. ..+..|++|+.|+++.| ++.+.++.-...+++|++|+++.|++.- +.+ +..+.+
T Consensus 42 ~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl~pl~~l~n 117 (260)
T KOG2739|consen 42 FVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTLRPLKELEN 117 (260)
T ss_pred ccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc--ccccchhhhhcc
Confidence 34455555555555421 34455666677777777 4444444444455666666666666652 222 233344
Q ss_pred CCEEEeeccCCC
Q 004842 156 LDRIQIDQNYIS 167 (728)
Q Consensus 156 L~~L~L~~N~l~ 167 (728)
|..|++.+|..+
T Consensus 118 L~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 118 LKSLDLFNCSVT 129 (260)
T ss_pred hhhhhcccCCcc
Confidence 445555555443
No 483
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.61 E-value=0.0038 Score=60.75 Aligned_cols=86 Identities=23% Similarity=0.451 Sum_probs=66.5
Q ss_pred CCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCC-CcccceeEEEEeCCeEEEEEec
Q 004842 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~Ey 701 (728)
..|...+.||.|+||.+|.|. ..+|..||||.=...... ....-|.++.+.++| ..|..+.-|..+...-.+|||.
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 567788999999999999998 677999999986544322 246678888888876 5666666677777888999997
Q ss_pred CCCCCHHHHHh
Q 004842 702 MSNGTLRDQLS 712 (728)
Q Consensus 702 ~~~GsL~~~L~ 712 (728)
+ +-+|.+...
T Consensus 93 L-GPsLEdLfn 102 (341)
T KOG1163|consen 93 L-GPSLEDLFN 102 (341)
T ss_pred c-CccHHHHHH
Confidence 6 457777664
No 484
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=96.50 E-value=0.0029 Score=62.94 Aligned_cols=82 Identities=22% Similarity=0.386 Sum_probs=63.0
Q ss_pred CceeccCceEEEEEEeCCCCEEEEEEcccCCh-hcHHHHHHHHHHHhcCCCC--cccceeEEEEeC---CeEEEEEecCC
Q 004842 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHR--NLVSLVGYCDEE---GEQMLVYEFMS 703 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~--niv~l~g~~~~~---~~~~lV~Ey~~ 703 (728)
+.++.|.++.||+++..+|..+++|....... ....++.+|++++..+++. .+.++++++... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46899999999999987778999999865432 1234688999999999764 457778777553 25689999999
Q ss_pred CCCHHHHH
Q 004842 704 NGTLRDQL 711 (728)
Q Consensus 704 ~GsL~~~L 711 (728)
++++.+.+
T Consensus 84 G~~l~~~~ 91 (223)
T cd05154 84 GRVLRDRL 91 (223)
T ss_pred CEecCCCC
Confidence 98887654
No 485
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=96.27 E-value=0.0026 Score=65.94 Aligned_cols=91 Identities=23% Similarity=0.306 Sum_probs=70.6
Q ss_pred cCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCC--C----cccceeEEEEeCCeE
Q 004842 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--R----NLVSLVGYCDEEGEQ 695 (728)
Q Consensus 623 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H--~----niv~l~g~~~~~~~~ 695 (728)
+..|.....+|+|.||.|-++.- ..+..||||+++.-... .+.-.-|++++.++.+ | -+|.+.+|+.-.+..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 56688889999999999999974 33789999999753322 2345679999999932 2 367888888888899
Q ss_pred EEEEecCCCCCHHHHHhcCC
Q 004842 696 MLVYEFMSNGTLRDQLSGIF 715 (728)
Q Consensus 696 ~lV~Ey~~~GsL~~~L~~~~ 715 (728)
++|+|.|. -|++|+|....
T Consensus 167 CivfellG-~S~~dFlk~N~ 185 (415)
T KOG0671|consen 167 CIVFELLG-LSTFDFLKENN 185 (415)
T ss_pred EEEEeccC-hhHHHHhccCC
Confidence 99999873 39999998753
No 486
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.11 E-value=0.013 Score=62.36 Aligned_cols=88 Identities=22% Similarity=0.288 Sum_probs=65.7
Q ss_pred CcccCCceeccCceEEEEEEeCCC--CEEEEEEcccCChhcHHHHHHHHHHHhcCCC----CcccceeEEE-EeCCeEEE
Q 004842 625 NFNSSTQIGQGGYGKVYKGILPDG--TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH----RNLVSLVGYC-DEEGEQML 697 (728)
Q Consensus 625 ~~~~~~~iG~G~fg~Vy~~~~~~g--~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H----~niv~l~g~~-~~~~~~~l 697 (728)
.|...+.||+|+||.||.+.-... ..+|+|.-..........+..|+.++..+.+ +++.++++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 688889999999999999985443 4788888765433222257778888888763 5788888887 46778899
Q ss_pred EEecCCCCCHHHHHhc
Q 004842 698 VYEFMSNGTLRDQLSG 713 (728)
Q Consensus 698 V~Ey~~~GsL~~~L~~ 713 (728)
||+.+ +-+|.+....
T Consensus 99 VM~l~-G~sL~dl~~~ 113 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKR 113 (322)
T ss_pred EEecc-CccHHHHHHh
Confidence 99955 5689987743
No 487
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=95.95 E-value=0.011 Score=56.10 Aligned_cols=76 Identities=14% Similarity=0.118 Sum_probs=55.3
Q ss_pred CceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccc-eeEEEEeCCeEEEEEecCCCCCHH
Q 004842 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS-LVGYCDEEGEQMLVYEFMSNGTLR 708 (728)
Q Consensus 630 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~-l~g~~~~~~~~~lV~Ey~~~GsL~ 708 (728)
+.++.|.++.||++... +..|++|....... ....+.+|++++..+.+.++++ ++++ ..+..++||||+++.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCccc
Confidence 46789999999999874 77899999765432 1235678999999887666554 4443 234468999999998876
Q ss_pred H
Q 004842 709 D 709 (728)
Q Consensus 709 ~ 709 (728)
+
T Consensus 80 ~ 80 (170)
T cd05151 80 T 80 (170)
T ss_pred c
Confidence 4
No 488
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.87 E-value=0.00057 Score=67.62 Aligned_cols=99 Identities=22% Similarity=0.289 Sum_probs=64.9
Q ss_pred CcceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCc--cCCCCCCCCE
Q 004842 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPE--ELGYLPKLDR 158 (728)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~ 158 (728)
+..++.|+..+++|..+ .-...|+.|++|.||-|+|+..- .|..+++|++|+|..|.|.. +.+ .+.++|+|+.
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~--pl~rCtrLkElYLRkN~I~s-ldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLA--PLQRCTRLKELYLRKNCIES-LDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccch--hHHHHHHHHHHHHHhccccc-HHHHHHHhcCchhhh
Confidence 34677777777777643 23356788888888888887443 36788888888888888762 222 2466777777
Q ss_pred EEeeccCCCCCCcH-----hhhccCCCCEEE
Q 004842 159 IQIDQNYISGSLPK-----SFANLNKTRHFH 184 (728)
Q Consensus 159 L~L~~N~l~~~~p~-----~~~~l~~L~~L~ 184 (728)
|.|..|.-.+..+. .+.-|++|+.||
T Consensus 93 LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred HhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 77777766655443 233455555543
No 489
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.83 E-value=0.013 Score=59.88 Aligned_cols=87 Identities=20% Similarity=0.317 Sum_probs=61.2
Q ss_pred CCcccCCceeccCceEEEEEE-eCCCCEEEEEEcccCChhcHHHHHHHHHHHhcC-CCCcccceeEEEEeCCeEEEEEec
Q 004842 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEF 701 (728)
Q Consensus 624 ~~~~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey 701 (728)
-.|...++||+|.||..+.|+ +-++++||||.=...+.. .+...|-+..+.+ .-+.|...+-+-.++..-.||+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A--PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA--PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCCc--chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 358889999999999999998 557999999976443222 2344555555555 447777766555556667899997
Q ss_pred CCCCCHHHHHhc
Q 004842 702 MSNGTLRDQLSG 713 (728)
Q Consensus 702 ~~~GsL~~~L~~ 713 (728)
+ +-+|.|...-
T Consensus 106 L-GPSLEDLFD~ 116 (449)
T KOG1165|consen 106 L-GPSLEDLFDL 116 (449)
T ss_pred h-CcCHHHHHHH
Confidence 7 3477766653
No 490
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.37 E-value=0.00057 Score=67.61 Aligned_cols=13 Identities=31% Similarity=0.411 Sum_probs=4.8
Q ss_pred CCCcEEECcCCCC
Q 004842 202 PSLVHMLLDNNNL 214 (728)
Q Consensus 202 ~~L~~L~L~~N~l 214 (728)
+.|+.|.|+-|+|
T Consensus 41 p~lEVLsLSvNkI 53 (388)
T KOG2123|consen 41 PLLEVLSLSVNKI 53 (388)
T ss_pred ccceeEEeecccc
Confidence 3333333333333
No 491
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=95.11 E-value=0.045 Score=51.42 Aligned_cols=79 Identities=22% Similarity=0.303 Sum_probs=58.3
Q ss_pred cCCceeccCceEEEEEEeCCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCCeEEEEEecCCCCCH
Q 004842 628 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (728)
Q Consensus 628 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 707 (728)
....|++|.+|.||.|.+. |..+|+|+-+..+. .+.+..|++++..+.-.++-+=+-.+ +...+.|||..+-.|
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~y---g~~~i~me~i~G~~L 99 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFY---GEDFIRMEYIDGRPL 99 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEe---chhhhhhhhhcCcch
Confidence 4577999999999999995 55889998765443 45788999999988877665432222 334466999998787
Q ss_pred HHHHh
Q 004842 708 RDQLS 712 (728)
Q Consensus 708 ~~~L~ 712 (728)
.++-.
T Consensus 100 ~~~~~ 104 (201)
T COG2112 100 GKLEI 104 (201)
T ss_pred hhhhh
Confidence 77655
No 492
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=95.09 E-value=0.0057 Score=62.00 Aligned_cols=82 Identities=24% Similarity=0.344 Sum_probs=59.4
Q ss_pred CCceeccCceEEEEEE-eCCCCEEEEEEcccC--ChhcHHHHHHHHHHHhcCCCCcccceeEEEEeCC------eEEEEE
Q 004842 629 STQIGQGGYGKVYKGI-LPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------EQMLVY 699 (728)
Q Consensus 629 ~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~lV~ 699 (728)
...+|.|.= .|..+. .-.+++||+|++... .....+.-.+|..++..+.|+||++++.++.... ..|+||
T Consensus 22 L~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~ 100 (369)
T KOG0665|consen 22 LKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVM 100 (369)
T ss_pred ecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHH
Confidence 344566655 333332 123789999988542 2233456789999999999999999999986543 579999
Q ss_pred ecCCCCCHHHHHh
Q 004842 700 EFMSNGTLRDQLS 712 (728)
Q Consensus 700 Ey~~~GsL~~~L~ 712 (728)
|||.. +|.+.++
T Consensus 101 e~m~~-nl~~vi~ 112 (369)
T KOG0665|consen 101 ELMDA-NLCQVIL 112 (369)
T ss_pred Hhhhh-HHHHHHH
Confidence 99975 8998887
No 493
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=94.87 E-value=0.02 Score=61.68 Aligned_cols=97 Identities=23% Similarity=0.303 Sum_probs=72.4
Q ss_pred ccchHHHHhhcCCcccCCceeccCceEEEEEEe-CCCCEEEEEEcccCChhcHHHHHHHHHHHhcCCC------Ccccce
Q 004842 613 SFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH------RNLVSL 685 (728)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H------~niv~l 685 (728)
.+.+.|+.. ..|...-..|+|-|+.|.+|.- ..|..||||++.... .-.+.=..|+++|+++.. -+.++|
T Consensus 423 rv~igE~LD--~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 423 RVRIGELLD--SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred EEehhhhhc--ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 344455443 4566677789999999999983 448899999997642 223455689999998842 367888
Q ss_pred eEEEEeCCeEEEEEecCCCCCHHHHHhc
Q 004842 686 VGYCDEEGEQMLVYEFMSNGTLRDQLSG 713 (728)
Q Consensus 686 ~g~~~~~~~~~lV~Ey~~~GsL~~~L~~ 713 (728)
+-.+...+.++||+|-+.- +|.+.|..
T Consensus 500 ~r~F~hknHLClVFE~Lsl-NLRevLKK 526 (752)
T KOG0670|consen 500 FRHFKHKNHLCLVFEPLSL-NLREVLKK 526 (752)
T ss_pred HHHhhhcceeEEEehhhhc-hHHHHHHH
Confidence 8888888999999997765 89999874
No 494
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.79 E-value=8.3e-05 Score=82.22 Aligned_cols=182 Identities=23% Similarity=0.244 Sum_probs=115.3
Q ss_pred eeEEECCCCCCccccC----ccccCCCCCCEEEccCCCCccCCCc----cccCC-CCCcEEeccCCcCCCc----CCccC
Q 004842 84 LRELQLLNLNLSGNLS----PEIGRLSYLTILDFMWNKISGSIPK----EIGNI-KSLELLLLNGNELTGS----LPEEL 150 (728)
Q Consensus 84 l~~L~l~~~~l~~~~~----~~~~~l~~L~~L~Ls~n~l~~~~p~----~~~~l-~~L~~L~L~~N~l~~~----~p~~~ 150 (728)
+..|.|.+|.+..... ..+.....|+.|++++|.+.+.--. .+... ..|++|++..|.++.. +.+.+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 6778888888764332 3456678888899999988732211 12222 5677788888887743 44455
Q ss_pred CCCCCCCEEEeeccCCCC----CCcHhhh----ccCCCCEEEccCcccccc----cccccCCCCC-CcEEECcCCCCCCC
Q 004842 151 GYLPKLDRIQIDQNYISG----SLPKSFA----NLNKTRHFHMNNNSISGQ----IPPELSRLPS-LVHMLLDNNNLTGY 217 (728)
Q Consensus 151 ~~l~~L~~L~L~~N~l~~----~~p~~~~----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~-L~~L~L~~N~l~~~ 217 (728)
.....++.++++.|.+.. .++..+. ...++++|++++|.++.. +...+...+. +..+++..|++.+.
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 667788888888887741 1223333 467788888888876522 2233444555 66688888877643
Q ss_pred ----CCcCCCCC-CCCcEEEcccccCCCCC---CcccccCCCCCcEEEccCCcCcc
Q 004842 218 ----LPPELSEL-PKLLILQLDNNNFEGTT---IPASYSNMSKLLKLSLRNCSLQG 265 (728)
Q Consensus 218 ----~~~~l~~l-~~L~~L~L~~N~l~~~~---~p~~~~~l~~L~~L~L~~n~l~~ 265 (728)
....+..+ ..++.++++.|.++... +...+..++.+++|.+++|.+..
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 22334444 56788888888876521 23345566678888888887764
No 495
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.65 E-value=0.03 Score=33.22 Aligned_cols=11 Identities=27% Similarity=0.422 Sum_probs=4.3
Q ss_pred ceeecccccCc
Q 004842 324 QRLFIANNSLS 334 (728)
Q Consensus 324 ~~L~L~~N~l~ 334 (728)
++|||++|+|+
T Consensus 3 ~~Ldls~n~l~ 13 (22)
T PF00560_consen 3 EYLDLSGNNLT 13 (22)
T ss_dssp SEEEETSSEES
T ss_pred cEEECCCCcCE
Confidence 33334444333
No 496
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.54 E-value=0.028 Score=33.41 Aligned_cols=11 Identities=64% Similarity=0.797 Sum_probs=4.2
Q ss_pred cEEeccCCcCC
Q 004842 133 ELLLLNGNELT 143 (728)
Q Consensus 133 ~~L~L~~N~l~ 143 (728)
++|||++|+++
T Consensus 3 ~~Ldls~n~l~ 13 (22)
T PF00560_consen 3 EYLDLSGNNLT 13 (22)
T ss_dssp SEEEETSSEES
T ss_pred cEEECCCCcCE
Confidence 33333333333
No 497
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=93.41 E-value=0.12 Score=45.56 Aligned_cols=34 Identities=35% Similarity=0.562 Sum_probs=21.6
Q ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 004842 556 GISKAALAGIILGAIAGAVTISAIVSLLIVRAHM 589 (728)
Q Consensus 556 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 589 (728)
..+..++++|++|++++++.+++++.|+++|+++
T Consensus 60 ~fs~~~i~~Ii~gv~aGvIg~Illi~y~irR~~K 93 (122)
T PF01102_consen 60 RFSEPAIIGIIFGVMAGVIGIILLISYCIRRLRK 93 (122)
T ss_dssp SSS-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred CccccceeehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4456789999999988876665555555444433
No 498
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=92.82 E-value=0.0035 Score=60.57 Aligned_cols=88 Identities=20% Similarity=0.233 Sum_probs=52.4
Q ss_pred cccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEEeeccCCCCCCcHhhhccCCC
Q 004842 101 EIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKT 180 (728)
Q Consensus 101 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 180 (728)
.+......+.||++.|++. ..-..|+-++.|..|+++.|.+. ..|+.++.+..+..+++..|..+ ..|.+++.++.+
T Consensus 37 ei~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~ 113 (326)
T KOG0473|consen 37 EIASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHP 113 (326)
T ss_pred hhhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCc
Confidence 3444455555666666554 33344555566666666666665 55666666666666666666555 456666666777
Q ss_pred CEEEccCcccc
Q 004842 181 RHFHMNNNSIS 191 (728)
Q Consensus 181 ~~L~L~~N~l~ 191 (728)
+++++..|.+.
T Consensus 114 k~~e~k~~~~~ 124 (326)
T KOG0473|consen 114 KKNEQKKTEFF 124 (326)
T ss_pred chhhhccCcch
Confidence 77766666643
No 499
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=92.49 E-value=0.0018 Score=62.61 Aligned_cols=83 Identities=19% Similarity=0.215 Sum_probs=46.4
Q ss_pred CcceeEEECCCCCCccccCccccCCCCCCEEEccCCCCccCCCccccCCCCCcEEeccCCcCCCcCCccCCCCCCCCEEE
Q 004842 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (728)
Q Consensus 81 ~~~l~~L~l~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 160 (728)
+.+++.||++.|.+. .+-..|+-++.|..||++.|.+. ..|..++.+..+..+++..|..+ ..|.+++..+++++++
T Consensus 41 ~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~e 117 (326)
T KOG0473|consen 41 FKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKNE 117 (326)
T ss_pred cceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchhh
Confidence 455556666555553 22334455555556666666555 45555555555566666555555 5555566666666666
Q ss_pred eeccCC
Q 004842 161 IDQNYI 166 (728)
Q Consensus 161 L~~N~l 166 (728)
+..|.+
T Consensus 118 ~k~~~~ 123 (326)
T KOG0473|consen 118 QKKTEF 123 (326)
T ss_pred hccCcc
Confidence 555553
No 500
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=92.03 E-value=0.16 Score=56.83 Aligned_cols=79 Identities=20% Similarity=0.291 Sum_probs=0.0
Q ss_pred eeccCceEEEEEEeCCCCEEEEEEcccCChhc----------------------------------------HHHHHHHH
Q 004842 632 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG----------------------------------------EKEFLTEI 671 (728)
Q Consensus 632 iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~----------------------------------------~~~f~~E~ 671 (728)
|+.++-|+||+|++++|+.||||+.+.+-... +-++.+|+
T Consensus 133 iAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA 212 (517)
T COG0661 133 IASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREA 212 (517)
T ss_pred hhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHH
Q ss_pred HHHhcC-----CCCcccceeEEEEeCCeEEEEEecCCCCCHHHH
Q 004842 672 QFLSRL-----HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQ 710 (728)
Q Consensus 672 ~~l~~l-----~H~niv~l~g~~~~~~~~~lV~Ey~~~GsL~~~ 710 (728)
.-+.++ ..+++.--.=|..-.+...|+|||++|-.+.+.
T Consensus 213 ~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~ 256 (517)
T COG0661 213 ANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDI 256 (517)
T ss_pred HHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccH
Done!