Your job contains 1 sequence.
>004844
MKSERKYVVPCGKCRTKVYCIQCIKQWYPKMSELDVAEICPFCRRNCNCSVCLHTSGFIE
TSKINMTDCEKVEHLRYLMVSLLPFIRQICEEQTQEIEFEASIQRVHSSKVGVSETLCGN
DERVYCNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRAEMKFQYVNRGYGYMQG
GDPLPESCLHQTPDVHVEPSVMWSADDNGTISCPPTEMGGCGDCVLELTRILPDRWISDL
EKEARDLVLILDNKLTNLRQNRAETGTDMLCKAASREGSDDNLLYCPDSTKIQEDEELFR
FQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEV
EISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPR
AGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNILTHTEEVL
LTEEQHSAVERLKKEHRAQDLKENLVQDGMDESIEEPNSDNNKEDTDVSEINDSELLPSG
IRGEFKMSRDEMQGTAFTCPHSEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVY
CSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKS
CTKVAVDFVSPENVDECLRLTKEFRLLPKNHRAREDKLEVYLVFIKRKCYVHEISSSFVF
ILLTHIFF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004844
(728 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2008875 - symbol:AT1G11950 "AT1G11950" species... 1672 1.1e-227 2
TAIR|locus:2027109 - symbol:AT1G62310 "AT1G62310" species... 1641 1.2e-225 2
TAIR|locus:2125221 - symbol:AT4G00990 "AT4G00990" species... 1071 6.2e-157 2
TAIR|locus:2036014 - symbol:AT1G09060 "AT1G09060" species... 751 3.8e-112 2
TAIR|locus:2141221 - symbol:B160 "AT4G21430" species:3702... 638 4.7e-80 2
MGI|MGI:1923356 - symbol:Kdm3b "KDM3B lysine (K)-specific... 293 2.7e-49 3
UNIPROTKB|E1BE97 - symbol:LOC100848816 "Uncharacterized p... 294 3.4e-49 3
UNIPROTKB|Q7LBC6 - symbol:KDM3B "Lysine-specific demethyl... 294 3.4e-49 3
UNIPROTKB|F1NJZ2 - symbol:KDM3B "Uncharacterized protein"... 294 5.4e-49 3
UNIPROTKB|F1RH75 - symbol:KDM3B "Uncharacterized protein"... 294 7.1e-49 3
UNIPROTKB|Q9Y4C1 - symbol:KDM3A "Lysine-specific demethyl... 289 3.4e-48 3
UNIPROTKB|F1SVC8 - symbol:KDM3A "Uncharacterized protein"... 289 4.3e-48 3
UNIPROTKB|E1BFC2 - symbol:KDM3A "Uncharacterized protein"... 289 5.5e-48 3
UNIPROTKB|E2QWU9 - symbol:KDM3A "Uncharacterized protein"... 289 5.5e-48 3
MGI|MGI:98847 - symbol:Kdm3a "lysine (K)-specific demethy... 289 3.8e-47 3
RGD|708351 - symbol:Kdm3a "lysine (K)-specific demethylas... 287 5.5e-47 3
UNIPROTKB|Q5ZIX8 - symbol:KDM3A "Lysine-specific demethyl... 291 5.4e-46 4
FB|FBgn0037703 - symbol:JHDM2 "JmjC domain-containing his... 265 1.9e-45 3
UNIPROTKB|E1C232 - symbol:KDM3A "Lysine-specific demethyl... 273 9.0e-45 4
UNIPROTKB|Q15652 - symbol:JMJD1C "Probable JmjC domain-co... 233 1.0e-34 3
MGI|MGI:1918614 - symbol:Jmjd1c "jumonji domain containin... 226 2.4e-33 3
RGD|620634 - symbol:Hr "hair growth associated" species:1... 144 4.1e-16 3
UNIPROTKB|F1MBI2 - symbol:HR "Uncharacterized protein" sp... 137 1.2e-14 3
MGI|MGI:96223 - symbol:Hr "hairless" species:10090 "Mus m... 143 2.2e-14 3
UNIPROTKB|F1PFJ6 - symbol:HR "Uncharacterized protein" sp... 137 4.9e-14 3
UNIPROTKB|O43593 - symbol:HR "Protein hairless" species:9... 133 1.4e-13 4
UNIPROTKB|F1RMB8 - symbol:HR "Uncharacterized protein" sp... 131 5.3e-12 4
RGD|708458 - symbol:Jmjd1c "jumonji domain containing 1C"... 171 7.9e-12 1
>TAIR|locus:2008875 [details] [associations]
symbol:AT1G11950 "AT1G11950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:NOG305537 KO:K15601 EMBL:AB493451 IPI:IPI00542320
RefSeq:NP_172659.3 UniGene:At.42102 ProteinModelPortal:C0SUU8
PRIDE:C0SUU8 EnsemblPlants:AT1G11950.1 GeneID:837747
KEGG:ath:AT1G11950 TAIR:At1g11950 HOGENOM:HOG000243122 OMA:NHCATSI
PhylomeDB:C0SUU8 ProtClustDB:CLSN2914506 Genevestigator:C0SUU8
Uniprot:C0SUU8
Length = 875
Score = 1672 (593.6 bits), Expect = 1.1e-227, Sum P(2) = 1.1e-227
Identities = 309/519 (59%), Positives = 382/519 (73%)
Query: 2 KSERKYVVPCGKCRTKVYCIQCIKQWYPKMSELDVAEICPFCRRNCNCSVCLHTSGFIET 61
K ER+Y+ C C ++YC CIK+WYP +S D+ E CPFCR CNC CLH+SG IET
Sbjct: 198 KGERRYLFICTFCEVRLYCFPCIKKWYPHLSTDDILEKCPFCRGTCNCCTCLHSSGLIET 257
Query: 62 SKINMTDCEKVEHLRYLMVSLLPFIRQICEEQTQEIEFEASIQRVHSSKVGVSETLCGND 121
SK + E+ HLR+L+V++LPF++++C+ Q QEIE EA +Q +S+V +SE+LC N+
Sbjct: 258 SKRKLDKYERFYHLRFLIVAMLPFLKKLCKAQDQEIETEAKVQDSMASQVDISESLCSNE 317
Query: 122 ERVYCNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRAEMKFQYVNRGYGYMQGG 181
ERV+CNHCATSI+DLHRSCPKCSYELCL CC+EI G LS R E + Q+ RG Y+ G
Sbjct: 318 ERVFCNHCATSIVDLHRSCPKCSYELCLNCCQEIRGGWLSDRPECQLQFEYRGTRYIHGE 377
Query: 182 DPLPESCLHQTPDVHVEPSVMWSADDNGTISCPPTEMGGCGDCVLELTRILPDRWISDLE 241
P S + D PS+ W+AD+NG+I C P E+GGCGD VLEL RILP W+SDLE
Sbjct: 378 AAEPSSS-SVSEDETKTPSIKWNADENGSIRCAPKELGGCGDSVLELKRILPVTWMSDLE 436
Query: 242 KEARDLVLILDNKLTNLRQNRAETGTDMLCKAASREGSDDNLLYCPDSTKIQEDEELFRF 301
++A + K + + M KAASR+GS DN LY PDS + + EEL F
Sbjct: 437 QKAETFLASYSIKPPMSYCRCSSDMSSMKRKAASRDGSSDNYLYSPDSLDVLKQEELLHF 496
Query: 302 QKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEVE 361
Q+HW KGEPVIVRN L+ GLSWEPMVMWRALCENVDS +SS MS+VKAIDCLA+CEV+
Sbjct: 497 QEHWSKGEPVIVRNALNNTAGLSWEPMVMWRALCENVDSAISSNMSDVKAIDCLANCEVK 556
Query: 362 ISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRA 421
I+T FF+GY++GRTY+NFWPEMLKLKDWPPSDKFE+L+PRHCDEFISALPFQEYSDPR+
Sbjct: 557 INTLCFFEGYSKGRTYENFWPEMLKLKDWPPSDKFENLLPRHCDEFISALPFQEYSDPRS 616
Query: 422 GILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXX 481
GILN+A KLP G+LKPDLGPKTY+AYG ++ELGRGDSVTKLHCDMSDAVNI
Sbjct: 617 GILNIATKLPEGLLKPDLGPKTYVAYGTSDELGRGDSVTKLHCDMSDAVNILMHTAEVTL 676
Query: 482 XXXQHSAVERLKKEHRAQDLKENLVQDGMDESIEEPNSD 520
Q SA+ LK++H+ Q+ KE Q+G++E EE SD
Sbjct: 677 SEEQRSAIADLKQKHKQQNEKELQEQNGLEE--EEVVSD 713
Score = 548 (198.0 bits), Expect = 1.1e-227, Sum P(2) = 1.1e-227
Identities = 99/133 (74%), Positives = 109/133 (81%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E+ GALWDIF+R+DVPKLE YLRKH EFRH YCS V +V HPIHDQ ++
Sbjct: 720 ETSGALWDIFKREDVPKLEEYLRKHCIEFRHTYCSRVTKVYHPIHDQSYFLTVEHKRKLK 779
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
FG+EPWTF QKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPEN+DECLRLT EFR L
Sbjct: 780 AEFGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIDECLRLTDEFRQL 839
Query: 688 PKNHRAREDKLEV 700
PKNH+AREDKLE+
Sbjct: 840 PKNHKAREDKLEI 852
Score = 40 (19.1 bits), Expect = 4.0e-54, Sum P(2) = 4.0e-54
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 90 CEEQTQEIEFEASIQRVHSSK-VGVSETLCGND 121
CE+Q Q + + R S K V V L N+
Sbjct: 117 CEQQLQLVPSSKATSRSRSKKSVSVDTWLVNNE 149
>TAIR|locus:2027109 [details] [associations]
symbol:AT1G62310 "AT1G62310" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50089
PROSITE:PS51184 SMART:SM00184 SMART:SM00558 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
eggNOG:NOG305537 KO:K15601 HOGENOM:HOG000243122
ProtClustDB:CLSN2914506 EMBL:AB493515 IPI:IPI00545153
RefSeq:NP_176421.1 UniGene:At.36279 UniGene:At.68585
ProteinModelPortal:C0SV12 SMR:C0SV12 PRIDE:C0SV12
EnsemblPlants:AT1G62310.1 GeneID:842529 KEGG:ath:AT1G62310
TAIR:At1g62310 OMA:LANCEVE PhylomeDB:C0SV12 Genevestigator:C0SV12
Uniprot:C0SV12
Length = 883
Score = 1641 (582.7 bits), Expect = 1.2e-225, Sum P(2) = 1.2e-225
Identities = 304/533 (57%), Positives = 384/533 (72%)
Query: 1 MKSERKYVVPCGKCRTKVYCIQCIKQWYPKMSELDVAEICPFCRRNCNCSVCLHTSGFIE 60
+K ER ++ C +C ++C+QCI++WYP +SE DV E CP CR+NCNCS CLH +G IE
Sbjct: 213 LKGERITLLICSECEKTMFCLQCIRKWYPNLSEDDVVEKCPLCRQNCNCSKCLHLNGLIE 272
Query: 61 TSKINMTDCEKVEHLRYLMVSLLPFIRQICEEQTQEIEFEASIQRVHSSKVGVSETLCGN 120
TSK + E+ HL+YL+ +LPF+ ++ Q EIEFEA++Q S+V ++ +
Sbjct: 273 TSKRELAKSERRHHLQYLITLMLPFLNKLSIFQKLEIEFEATVQGKLPSEVEITAAISYT 332
Query: 121 DERVYCNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRAEMKFQYVNRGYGYMQG 180
DERVYC+HCATSI+DLHRSCPKCSYELCL CC+EI EG LS R EMKF YV+RG+ YM G
Sbjct: 333 DERVYCDHCATSIVDLHRSCPKCSYELCLKCCQEIREGSLSERPEMKFHYVDRGHRYMHG 392
Query: 181 GDPLPESCLHQTPDVHVEPS-VMWSADDNGTISCPPTEMGGCGDCVLELTRILPDRWISD 239
D S D PS WS +NG+I+C P ++GGCG+ +LEL RILP W+SD
Sbjct: 393 LDAAEPSLSSTFEDEEANPSDAKWSLGENGSITCAPEKLGGCGERMLELRRILPLTWMSD 452
Query: 240 LEKEARDLVLI--LDNKLTNLRQNRAETGTDMLCKAASREGSDDNLLYCPDSTKIQEDEE 297
LE +A + + ++ N R + ET ++ K+ASR S DN L+CP+S + ++EE
Sbjct: 453 LEHKAETFLSSYNISPRMLNCRCSSLET--ELTRKSASRTTSSDNYLFCPESLGVLKEEE 510
Query: 298 LFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLAS 357
L FQ+HW KGEPVIVRN LD GLSWEPMVMWRALCENV+S SS+MS+VKAIDCLA+
Sbjct: 511 LLHFQEHWAKGEPVIVRNALDNTPGLSWEPMVMWRALCENVNSTSSSEMSQVKAIDCLAN 570
Query: 358 CEVEISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYS 417
CEVEI+TRQFF+GY++GRTY+NFWPEMLKLKDWPPSDKFEDL+PRHCDEFISALPFQEYS
Sbjct: 571 CEVEINTRQFFEGYSKGRTYENFWPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQEYS 630
Query: 418 DPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXX 477
DPR GILN+A KLP G +KPDLGPKTYIAYG+ +ELGRGDSVTKLHCDMSDAVNI
Sbjct: 631 DPRTGILNIATKLPEGFIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILTHTA 690
Query: 478 XXXXXXXQHSAVERLKKEHRAQDLKENLVQDGMDESIEEPNSDNNKEDTDVSE 530
Q S+V+ LK++H+ Q+ + + +E EE + N + +E
Sbjct: 691 EVTLSQEQISSVKALKQKHKLQNKVDKQSTEDCNEKEEEEEEELNMPEISSNE 743
Score = 560 (202.2 bits), Expect = 1.2e-225, Sum P(2) = 1.2e-225
Identities = 105/156 (67%), Positives = 117/156 (75%)
Query: 549 RDEMQGTAFTCPH-SEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQV 607
++E + P S E+G ALWDIFRR+DVPKLE YLRKH KEFRH YCSPV +V
Sbjct: 726 KEEEEEEELNMPEISSNENEETGSALWDIFRREDVPKLEEYLRKHCKEFRHTYCSPVTKV 785
Query: 608 IHPIHDQCFYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVD 667
HPIHDQ Y +G+EPWTF QKLGEAVFIPAGCPHQVRNLKSCTKVAVD
Sbjct: 786 YHPIHDQSCYLTLEHKRKLKAEYGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVD 845
Query: 668 FVSPENVDECLRLTKEFRLLPKNHRAREDKLEVYLV 703
FVSPEN+ ECLRLT+EFR LPKNH+AREDKLE L+
Sbjct: 846 FVSPENIHECLRLTEEFRQLPKNHKAREDKLEASLL 881
>TAIR|locus:2125221 [details] [associations]
symbol:AT4G00990 "AT4G00990" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00184 SMART:SM00558 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0008270 eggNOG:NOG305537 KO:K15601 HOGENOM:HOG000243122
EMBL:AY072204 EMBL:AY096708 IPI:IPI00545540 RefSeq:NP_192008.3
UniGene:At.3531 ProteinModelPortal:Q8VYB9 PaxDb:Q8VYB9 PRIDE:Q8VYB9
EnsemblPlants:AT4G00990.1 GeneID:827933 KEGG:ath:AT4G00990
TAIR:At4g00990 InParanoid:Q8VYB9 OMA:GYLEGRM PhylomeDB:Q8VYB9
ProtClustDB:CLSN2918567 Genevestigator:Q8VYB9 Uniprot:Q8VYB9
Length = 840
Score = 1071 (382.1 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 222/532 (41%), Positives = 308/532 (57%)
Query: 11 CGKCRTKVYCIQCIKQWYPKMSELDVAEICPFCRRNCNCSVCLHTSGFIETSKINMTDCE 70
C KC K YC CIK+ Y + + +V CPFC C C CL I+ TD
Sbjct: 95 CSKCNKKCYCFDCIKRSYSERTHEEVRAACPFCMMTCICRACLRLPLVIKPPSEKDTDV- 153
Query: 71 KVEHLRYLMVSLLPFIRQICEEQTQEIEFEASIQRVHSSKVGVSETLCGNDERVYCNHCA 130
K++ L+YL+V +LP ++ I EQ +E+E E++I+ ++ + ER+YC+ C
Sbjct: 154 KLKQLQYLLVKVLPVLKDIYTEQNRELEIESTIRGHPVTEANIKRCKLDPSERIYCDLCR 213
Query: 131 TSIIDLHRSCPK--CSYELCLTCCKEICEGRLSGRAEMKFQYVNRGYGYMQGGDPLPESC 188
TSI + HRSCP CS ++CL+CCKE+ EG R K G GY + P +
Sbjct: 214 TSIANFHRSCPNKNCSVDICLSCCKELSEGFHQERDGKKNA---EGKGY-ECRIPAGQG- 268
Query: 189 LHQTPDVHVEPSVM-WSADDNGTISCPPTEMGGCGDCVLELTRILPDRWISDLEKEARDL 247
+ D +V W + + +I CPP E GGCG LEL R+ W+ L A
Sbjct: 269 --KDSDAYVPLHFSTWKLNSDSSIPCPPKECGGCGTSTLELRRLWKRDWVEKLITNAEKC 326
Query: 248 VL-ILDNKLTNLRQ-NRAETGTDMLCK-AASREGSDDNLLYCPDSTKIQEDEELFRFQKH 304
L + + + + T +D + + AA R+ + DN LY P++ + ED+ + FQ H
Sbjct: 327 TLNFRPTDVDIVHECSSCSTNSDSIRRQAAFRKNAHDNFLYSPNAVDLAEDD-IAHFQFH 385
Query: 305 WIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSE---VSSKMSEVKAIDCLASCEVE 361
W+K EPVIVRNVL+K +GLSWEPMVMWRA C +D + + ++VKA+DCL CEVE
Sbjct: 386 WMKAEPVIVRNVLEKTSGLSWEPMVMWRA-CREMDPKRKGTEEETTKVKALDCLDWCEVE 444
Query: 362 ISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRA 421
I+ QFF+GY +GR + N WPEMLKLKDWPPSD FE +PRH EFI+ALPF +Y+DP++
Sbjct: 445 INLHQFFEGYLEGRMHKNGWPEMLKLKDWPPSDLFEKRLPRHNAEFIAALPFFDYTDPKS 504
Query: 422 GILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXX 481
GILNLA + P G LKPDLGPKTYIAYG EEL RGDSVTKLHCD+SDAVN+
Sbjct: 505 GILNLATRFPEGSLKPDLGPKTYIAYGFHEELNRGDSVTKLHCDISDAVNVLTHTAKVEI 564
Query: 482 XXXQHSAVERLKKEHRAQDLKENLVQDGMDESIEEPNSDNNKEDTDVSEIND 533
++ ++ +K++ L++ + E+ E N + D ++ D
Sbjct: 565 PPVKYQNIKVHQKKYAEAMLQKQQYSGQVKEASELENKSMKEVDESKKDLKD 616
Score = 480 (174.0 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 94/203 (46%), Positives = 126/203 (62%)
Query: 499 QDLKENLVQDGMDESIEEPNSDNNKEDTDVSEINDSELLPSGIRGEFKMSRDEMQGTAFT 558
+DLK+ + + P+ E +S+ D+ P+ + ++ T
Sbjct: 612 KDLKDKAANEEQSNNSSRPSGSGEAEKVIISK-EDNPTQPAVSTSVESIQEQKLDAPKET 670
Query: 559 CPHS-EGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFY 617
++ E + GGA+WDIFRR+DVPKL +L++H EFRH P+E VIHPIHDQ +
Sbjct: 671 DGNTNERSKAVHGGAVWDIFRREDVPKLIQFLKRHEHEFRHFNNEPLESVIHPIHDQTMF 730
Query: 618 XXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDEC 677
F +EPWTFEQ LGEAVFIPAGCPHQVRN +SC KVA+DFV+PE+V+EC
Sbjct: 731 LSDSQKKQLKEEFDIEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVAPESVEEC 790
Query: 678 LRLTKEFRLLPKNHRAREDKLEV 700
LRLT+EFR LPK+H + EDKLE+
Sbjct: 791 LRLTQEFRRLPKDHSSSEDKLEL 813
>TAIR|locus:2036014 [details] [associations]
symbol:AT1G09060 "AT1G09060" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 InterPro:IPR014977
Pfam:PF02373 Pfam:PF08879 PROSITE:PS50089 PROSITE:PS51184
SMART:SM00184 SMART:SM00558 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018866 Pfam:PF10497 KO:K15601
IPI:IPI00656590 RefSeq:NP_001031007.1 UniGene:At.10382
ProteinModelPortal:F4HZD1 PRIDE:F4HZD1 EnsemblPlants:AT1G09060.3
GeneID:837427 KEGG:ath:AT1G09060 OMA:MNWVAKL PhylomeDB:F4HZD1
Uniprot:F4HZD1
Length = 944
Score = 751 (269.4 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 178/505 (35%), Positives = 264/505 (52%)
Query: 203 WSADDNGTISCPPTEMGGCGDCVLELTRILPDRWISDLEKEARDLVLILDNKLTNLRQNR 262
W A+ +G+I CPP E GGCG L L RI W++ L K A ++V KL++L
Sbjct: 410 WEANGDGSIPCPPKEYGGCGSHSLNLARIFKMNWVAKLVKNAEEIVS--GCKLSDLLN-- 465
Query: 263 AETGTDMLCKAASREGSDDNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTG 322
+ CK A RE S DN +Y P I+ D + +F++ W +G V V+ VLD +
Sbjct: 466 PDMCDSRFCKFAEREESGDNYVYSPSLETIKTDG-VAKFEQQWAEGRLVTVKMVLDDSSC 524
Query: 323 LSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEVEISTRQFFKGYTQGRTYDNFWP 382
W+P +WR + E D ++ +KAI+CL EV++ +F + Y G+ + P
Sbjct: 525 SRWDPETIWRDIDELSDEKLREHDPFLKAINCLDGLEVDVRLGEFTRAYKDGKNQETGLP 584
Query: 383 EMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPK 442
+ KLKDWP E+ + EFI + PF EY PR G+LN+A KLP L+ D GPK
Sbjct: 585 LLWKLKDWPSPSASEEFIFYQRPEFIRSFPFLEYIHPRLGLLNVAAKLPHYSLQNDSGPK 644
Query: 443 TYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXXXXXQHSAVERLKKEHRAQDLK 502
Y++ G +E+ GDS+T +H +M D V + + + ER++K +
Sbjct: 645 IYVSCGTYQEISAGDSLTGIHYNMRDMVYLLVHTS-------EETTFERVRKTKPVPEEP 697
Query: 503 ENLVQDGMDESIEEPNS---DNNKEDTDVSEI----NDSELLPSGIRGEFKMSRDEMQGT 555
+ + + +ES+ P D D + E N+ EL + + D M+ +
Sbjct: 698 DQKMSE--NESLLSPEQKLRDGELHDLSLGEASMEKNEPELALTVNPENLTENGDNMESS 755
Query: 556 AFTCPHSEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQC 615
C S +GGA WD+FRRQDVPKL YL++ F++ ++ + V P+++
Sbjct: 756 ---CTSSC-----AGGAQWDVFRRQDVPKLSGYLQRTFQKPDNIQ---TDFVSRPLYEGL 804
Query: 616 FYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVD 675
F FGVEPWTFEQ GEA+FIPAGCP Q+ NL+S +VA+DF+ PE+V
Sbjct: 805 FLNEHHKRQLRDE-FGVEPWTFEQHRGEAIFIPAGCPFQITNLQSNIQVALDFLCPESVG 863
Query: 676 ECLRLTKEFRLLPKNHRAREDKLEV 700
E RL +E R LP +H A+ LE+
Sbjct: 864 ESARLAEEIRCLPNDHEAKLQILEI 888
Score = 376 (137.4 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 75/247 (30%), Positives = 130/247 (52%)
Query: 2 KSERKYVVPCGKCRTKVYCIQCIKQWYPKMSELDVAEICPFCRRNCNCSVCLHTSGFIET 61
+ +R+ ++ C KC + +C C+ Y ++S +V ++CP CR C+C CL + I+
Sbjct: 225 RKDRERIISCLKCNQRAFCHNCLSARYSEISLEEVEKVCPACRGLCDCKSCLRSDNTIKV 284
Query: 62 SKINMTDCEKVEHLRYLMVSLLPFIRQICEEQTQEIEFEASIQRVHSSKVGVSETLCGND 121
+ +K+++L L+ ++LP I+QI EQ E+E E ++ V ++ + D
Sbjct: 285 RIREIPVLDKLQYLYRLLSAVLPVIKQIHLEQCMEVELEKRLREV---EIDLVRARLKAD 341
Query: 122 ERVYCNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRAEMKFQYVNRGYGYMQGG 181
E++ CN C ++D +R CP CSY+LCL CC+++ E + + N+ +G
Sbjct: 342 EQMCCNVCRIPVVDYYRHCPNCSYDLCLRCCQDLRE-----ESSVTISGTNQNVQDRKGA 396
Query: 182 DPLPESCLHQTPDVHVEPSVMWSADDNGTISCPPTEMGGCGDCVLELTRILPDRWISDLE 241
L + ++ P+ W A+ +G+I CPP E GGCG L L RI W++ L
Sbjct: 397 PKLKLNFSYKFPE--------WEANGDGSIPCPPKEYGGCGSHSLNLARIFKMNWVAKLV 448
Query: 242 KEARDLV 248
K A ++V
Sbjct: 449 KNAEEIV 455
>TAIR|locus:2141221 [details] [associations]
symbol:B160 "AT4G21430" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001841 InterPro:IPR003347
InterPro:IPR014977 Pfam:PF02373 Pfam:PF08879 PROSITE:PS50089
PROSITE:PS51184 SMART:SM00184 SMART:SM00558 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 KO:K15601 EMBL:AY142484 EMBL:AB493691
IPI:IPI00524203 RefSeq:NP_193874.2 UniGene:At.32630
ProteinModelPortal:Q8H1S7 PRIDE:Q8H1S7 EnsemblPlants:AT4G21430.1
GeneID:827895 KEGG:ath:AT4G21430 TAIR:At4g21430 InParanoid:Q8H1S7
OMA:NILPISH PhylomeDB:Q8H1S7 ProtClustDB:CLSN2719050
ArrayExpress:Q8H1S7 Genevestigator:Q8H1S7 Uniprot:Q8H1S7
Length = 927
Score = 638 (229.6 bits), Expect = 4.7e-80, Sum P(2) = 4.7e-80
Identities = 162/518 (31%), Positives = 257/518 (49%)
Query: 213 CPPTEMGGCGDCVLELTRILPDRWISDLEKEARDLVL------ILDNKLTN----LRQNR 262
C E+ GC + + + P S LE A ++V ILD K + +
Sbjct: 412 CKRKEVKGCSNNLF--LSLFPLELTSKLEISAEEVVSCYELPEILD-KYSGCPFCIGMET 468
Query: 263 AETGTDMLCKAAS--REGSDDNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKV 320
+ +D K AS RE N LY P ++ L FQ HW KG PVIVR+V+
Sbjct: 469 QSSSSDSHLKEASKTREDGTGNFLYYPTVLDFHQNN-LEHFQTHWSKGHPVIVRSVIKSG 527
Query: 321 TGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEVEISTRQFFKGYTQGRTYDNF 380
+ L+W+P+ ++ N +++ + DC+ EVEI +QFF G +G+ N
Sbjct: 528 SSLNWDPVALFCHYLMNRNNKTGN------TTDCMDWFEVEIGVKQFFLGSLRGKAETNT 581
Query: 381 WPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLG 440
E LKL+ W S F++ P H E ++ LP Y DP+ G+LN+A LP V PD G
Sbjct: 582 CQERLKLEGWLSSSLFKEQFPNHYAEILNILPISHYMDPKRGLLNIAANLPDTVQPPDFG 641
Query: 441 PKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXXXXXQHSAVERLKKEHRAQD 500
P I+Y EE + DSV KL + D V+I Q + +L K + +
Sbjct: 642 PCLNISYRSGEEYAQPDSVKKLGFETCDMVDILLYVTETPVSTNQICRIRKLMK-NIGRV 700
Query: 501 LKENLVQDGMDESIEEPNSDNNKEDTDVSEINDSE-LLPSGIRGEFKMSRDEMQGTAFTC 559
+N + G + ++ + +D S+ S+ L + RG + +E + ++C
Sbjct: 701 RSKNPAK-GRESRFDKGKKRDRLDDYSSSDSESSQHCLGAKCRGS-EFEGEERESCNYSC 758
Query: 560 PHSEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXX 619
E ++ + GA WD+F++QDV KL Y++ H E + S ++V HP+ +Q +Y
Sbjct: 759 --EEESLSNTYGAQWDVFQKQDVSKLLEYIKNHSLELESMDSSK-KKVSHPLLEQSYYLD 815
Query: 620 XXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLR 679
F VEPW+F+Q +GEAV +PAGCP+Q+R KSC + F+SPE+V E ++
Sbjct: 816 EYHKARLKEEFDVEPWSFDQCVGEAVILPAGCPYQIRKNKSCVNAVLKFLSPEHVSESIK 875
Query: 680 LTKEFRLLPKNHRAREDKLEVYLVFIKRKCYVHEISSS 717
KE LP++ +++ +K+EV +K +H+IS +
Sbjct: 876 RVKELNQLPQSVKSKANKIEV------KKMAIHKISEA 907
Score = 190 (71.9 bits), Expect = 4.7e-80, Sum P(2) = 4.7e-80
Identities = 47/158 (29%), Positives = 84/158 (53%)
Query: 8 VVPCGKCRTKVYCIQCIKQWYPKMSELDVAEICPFCRRNCNCSVCLHT-SGFIET--SKI 64
++ C C + +CI CI++ K S+ +V + CP CR +C C VC T SG E S+
Sbjct: 238 LISCLSCEREFFCIDCIEK-RNKGSKEEVEKKCPVCRGSCRCKVCSVTNSGVTECKDSQS 296
Query: 65 NMTDCEKVEHLRYLMVSLLPFIRQICEEQTQEIEFEASIQRVHSSKVGVSETLCGNDERV 124
+D ++V HL Y + LLP +++I E E+E +A + + ++ + + +D+R
Sbjct: 297 VRSDIDRVLHLHYAVCMLLPVLKEINAEHKVEVENDAEKKEGNPAEPQIHSSELTSDDRQ 356
Query: 125 YCNHCAT-SIIDLHRSCPKCSYELCLTCCKEICEGRLS 161
C++ +++DL R C + S L L ++ + LS
Sbjct: 357 PCSNGRDFAVVDLQRMCTRSSSVLRLNSDQDQSQESLS 394
Score = 45 (20.9 bits), Expect = 4.1e-67, Sum P(3) = 4.1e-67
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 121 DERVYCNHCAT-SIIDLHRSCPKCSYEL-CLTCCKEICEG 158
++++ C+ C T DL SC C E C+ C ++ +G
Sbjct: 222 EKKMRCHWCGTRGFGDLI-SCLSCEREFFCIDCIEKRNKG 260
Score = 37 (18.1 bits), Expect = 4.1e-67, Sum P(3) = 4.1e-67
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 87 RQICEEQTQEIEFEASIQRVHSSKVGVSETLCGNDE 122
+++CE + + S Q+V S V G DE
Sbjct: 31 KKMCESHHSQQSLKRSKQKVAESSKLVRSRRGGGDE 66
Score = 37 (18.1 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 513 SIEEPNSDNNKEDTDVSEINDSELLPSGIRGEFKMSRDEMQG 554
S+ NSD ++ +S S +GI+ R E++G
Sbjct: 378 SVLRLNSDQDQSQESLSRKVGSVKCSNGIKSPKVCKRKEVKG 419
>MGI|MGI:1923356 [details] [associations]
symbol:Kdm3b "KDM3B lysine (K)-specific demethylase 3B"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 MGI:MGI:1923356 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 eggNOG:NOG305537 OrthoDB:EOG4W9J32 EMBL:AK129281
EMBL:BC031981 EMBL:BC038376 EMBL:BC060727 EMBL:BC108415
EMBL:AK018027 EMBL:AK033343 IPI:IPI00664808 IPI:IPI00757477
UniGene:Mm.277906 ProteinModelPortal:Q6ZPY7 STRING:Q6ZPY7
PhosphoSite:Q6ZPY7 PaxDb:Q6ZPY7 PRIDE:Q6ZPY7 CleanEx:MM_JMJD1B
Genevestigator:Q6ZPY7 GermOnline:ENSMUSG00000038773 Uniprot:Q6ZPY7
Length = 1562
Score = 293 (108.2 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 64/133 (48%), Positives = 77/133 (57%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ LRK +E +P + PIHDQ +Y
Sbjct: 1409 EKPGALWHIYAAKDAEKIRELLRKVGEEQGQE--NPPDH--DPIHDQSWYLDQILRKRLF 1464
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSPE+V C RLT+EFR L
Sbjct: 1465 EEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHL 1524
Query: 688 PKNHRAREDKLEV 700
H EDKL+V
Sbjct: 1525 SNTHTNHEDKLQV 1537
Score = 287 (106.1 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 78/253 (30%), Positives = 122/253 (48%)
Query: 266 GTDMLCKAASREGSDDNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSW 325
G ++L S D L C + + ++FR + W +G+PV+V V K+ W
Sbjct: 1173 GLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFR--ECWKQGQPVLVSGVHKKLKSELW 1230
Query: 326 EPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEV--EISTRQFFKGYT----QGRTYDN 379
+P E E + +V ++C +C + ++ R F+ G+ + R+ D
Sbjct: 1231 KP--------EAFSQEFGDQ--DVDLVNC-RNCAIISDVKVRDFWDGFEIICKRLRSEDG 1279
Query: 380 FWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDL 439
P +LKLKDWPP + F D+MP ++ + LP EY+ R G LNLA +LPS ++PDL
Sbjct: 1280 -QPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDL 1337
Query: 440 GPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXXXXXQHSAVERLKKEHRAQ 499
GPK Y AYG+ R T LH D+SDAVN+ V + E A
Sbjct: 1338 GPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPVGEGAHDEEVLKTIDEGDAD 1397
Query: 500 DLKENLVQDGMDE 512
++ + + DG ++
Sbjct: 1398 EVTKQRIHDGKEK 1410
Score = 76 (31.8 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 88 QICEEQTQEIEFEASIQRVHSSKVGVSETLCGNDERVYCNHCATSIIDLHRSCPKCSYEL 147
Q C+ E E ++ H KV + G R C+ C T++ ++H C KC + +
Sbjct: 798 QFCQLVMSEKEAMMMVEP-HQ-KVAWKRAVRG--VREMCDVCETTLFNIHWVCRKCGFGV 853
Query: 148 CLTC 151
CL C
Sbjct: 854 CLDC 857
Score = 42 (19.8 bits), Expect = 8.5e-21, Sum P(2) = 8.5e-21
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 487 SAVERLKKEHRAQDLKENLVQDGMDE-SIEEPNSDNNKEDTDVSEINDSE---LLPSGIR 542
SA +E++A E + + +DE S+ ++ ++D+S+++DSE SG++
Sbjct: 579 SAPAEFAQENKAPF--EAVKRFSLDERSLACRQDSDSSTNSDLSDLSDSEEQLQAKSGLK 636
Query: 543 G 543
G
Sbjct: 637 G 637
>UNIPROTKB|E1BE97 [details] [associations]
symbol:LOC100848816 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 KO:K15601 OMA:IICKRLR
EMBL:DAAA02020398 IPI:IPI00825479 RefSeq:XP_003582470.1
RefSeq:XP_003586349.1 Ensembl:ENSBTAT00000013278 GeneID:100848816
KEGG:bta:100848816 Uniprot:E1BE97
Length = 1759
Score = 294 (108.6 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 64/133 (48%), Positives = 77/133 (57%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ LRK +E +P + PIHDQ +Y
Sbjct: 1606 EKPGALWHIYAAKDAEKIRELLRKVGEEQGQE--NPPDH--DPIHDQSWYLDQTLRKRLY 1661
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSPE+V C RLT+EFR L
Sbjct: 1662 EEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHL 1721
Query: 688 PKNHRAREDKLEV 700
H EDKL+V
Sbjct: 1722 SNTHTNHEDKLQV 1734
Score = 287 (106.1 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 78/253 (30%), Positives = 122/253 (48%)
Query: 266 GTDMLCKAASREGSDDNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSW 325
G ++L S D L C + + ++FR + W +G+PV+V V K+ W
Sbjct: 1370 GLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFR--ECWKQGQPVLVSGVHKKLKSELW 1427
Query: 326 EPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEV--EISTRQFFKGYT----QGRTYDN 379
+P E E + +V ++C +C + ++ R F+ G+ + R+ D
Sbjct: 1428 KP--------EAFSQEFGDQ--DVDLVNC-RNCAIISDVKVRDFWDGFEIICKRLRSEDG 1476
Query: 380 FWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDL 439
P +LKLKDWPP + F D+MP ++ + LP EY+ R G LNLA +LPS ++PDL
Sbjct: 1477 -QPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDL 1534
Query: 440 GPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXXXXXQHSAVERLKKEHRAQ 499
GPK Y AYG+ R T LH D+SDAVN+ V + E A
Sbjct: 1535 GPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGAHDEEVLKTIDEGDAD 1594
Query: 500 DLKENLVQDGMDE 512
++ + + DG ++
Sbjct: 1595 EVTKQRIHDGKEK 1607
Score = 76 (31.8 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 88 QICEEQTQEIEFEASIQRVHSSKVGVSETLCGNDERVYCNHCATSIIDLHRSCPKCSYEL 147
Q C+ E E ++ H KV + G R C+ C T++ ++H C KC + +
Sbjct: 995 QFCQLVMSEKEAMMMVEP-HQ-KVAWKRAVRG--VREMCDVCETTLFNIHWVCRKCGFGV 1050
Query: 148 CLTC 151
CL C
Sbjct: 1051 CLDC 1054
Score = 38 (18.4 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 309 EPVIVRNVLDKVTGLSWEPMVMWRALC 335
E V+ NVLD T SW + R LC
Sbjct: 1366 EMVMGLNVLDPHTSHSW--LCDGRLLC 1390
Score = 37 (18.1 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 10/38 (26%), Positives = 23/38 (60%)
Query: 510 MDE-SIEEPNSDNNKEDTDVSEINDSE---LLPSGIRG 543
+DE S+ ++ ++D+S+++DSE +G++G
Sbjct: 797 LDERSLACRQDSDSSTNSDLSDLSDSEEQLQAKTGLKG 834
>UNIPROTKB|Q7LBC6 [details] [associations]
symbol:KDM3B "Lysine-specific demethylase 3B" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 EMBL:CH471062 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 eggNOG:NOG305537 KO:K15601
EMBL:AF251039 EMBL:AF338242 EMBL:AB029005 EMBL:AC104116
EMBL:AC113403 EMBL:BC000539 EMBL:BC001202 EMBL:BC146788
IPI:IPI00298935 IPI:IPI00748132 IPI:IPI00749486 RefSeq:NP_057688.2
UniGene:Hs.483486 ProteinModelPortal:Q7LBC6 IntAct:Q7LBC6
MINT:MINT-1195273 STRING:Q7LBC6 PhosphoSite:Q7LBC6 DMDM:308153456
PaxDb:Q7LBC6 PRIDE:Q7LBC6 Ensembl:ENST00000314358
Ensembl:ENST00000394866 GeneID:51780 KEGG:hsa:51780 UCSC:uc003lcy.1
UCSC:uc010jew.1 CTD:51780 GeneCards:GC05P137688 HGNC:HGNC:1337
HPA:HPA016610 MIM:609373 neXtProt:NX_Q7LBC6 PharmGKB:PA25918
InParanoid:Q7LBC6 OMA:IICKRLR OrthoDB:EOG4W9J32 GenomeRNAi:51780
NextBio:55912 ArrayExpress:Q7LBC6 Bgee:Q7LBC6 CleanEx:HS_JMJD1B
Genevestigator:Q7LBC6 GermOnline:ENSG00000120733 Uniprot:Q7LBC6
Length = 1761
Score = 294 (108.6 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 64/133 (48%), Positives = 77/133 (57%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ LRK +E +P + PIHDQ +Y
Sbjct: 1608 EKPGALWHIYAAKDAEKIRELLRKVGEEQGQE--NPPDH--DPIHDQSWYLDQTLRKRLY 1663
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSPE+V C RLT+EFR L
Sbjct: 1664 EEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHL 1723
Query: 688 PKNHRAREDKLEV 700
H EDKL+V
Sbjct: 1724 SNTHTNHEDKLQV 1736
Score = 287 (106.1 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 78/253 (30%), Positives = 122/253 (48%)
Query: 266 GTDMLCKAASREGSDDNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSW 325
G ++L S D L C + + ++FR + W +G+PV+V V K+ W
Sbjct: 1372 GLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFR--ECWKQGQPVLVSGVHKKLKSELW 1429
Query: 326 EPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEV--EISTRQFFKGYT----QGRTYDN 379
+P E E + +V ++C +C + ++ R F+ G+ + R+ D
Sbjct: 1430 KP--------EAFSQEFGDQ--DVDLVNC-RNCAIISDVKVRDFWDGFEIICKRLRSEDG 1478
Query: 380 FWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDL 439
P +LKLKDWPP + F D+MP ++ + LP EY+ R G LNLA +LPS ++PDL
Sbjct: 1479 -QPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDL 1536
Query: 440 GPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXXXXXQHSAVERLKKEHRAQ 499
GPK Y AYG+ R T LH D+SDAVN+ V + E A
Sbjct: 1537 GPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGAHDEEVLKTIDEGDAD 1596
Query: 500 DLKENLVQDGMDE 512
++ + + DG ++
Sbjct: 1597 EVTKQRIHDGKEK 1609
Score = 76 (31.8 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 88 QICEEQTQEIEFEASIQRVHSSKVGVSETLCGNDERVYCNHCATSIIDLHRSCPKCSYEL 147
Q C+ E E ++ H KV + G R C+ C T++ ++H C KC + +
Sbjct: 997 QFCQLVMSEKEAMMMVEP-HQ-KVAWKRAVRG--VREMCDVCETTLFNIHWVCRKCGFGV 1052
Query: 148 CLTC 151
CL C
Sbjct: 1053 CLDC 1056
Score = 38 (18.4 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 309 EPVIVRNVLDKVTGLSWEPMVMWRALC 335
E V+ NVLD T SW + R LC
Sbjct: 1368 EMVMGLNVLDPHTSHSW--LCDGRLLC 1392
Score = 37 (18.1 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 10/38 (26%), Positives = 23/38 (60%)
Query: 510 MDE-SIEEPNSDNNKEDTDVSEINDSE---LLPSGIRG 543
+DE S+ ++ ++D+S+++DSE +G++G
Sbjct: 799 LDERSLACRQDSDSSTNSDLSDLSDSEEQLQAKTGLKG 836
>UNIPROTKB|F1NJZ2 [details] [associations]
symbol:KDM3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 OMA:IICKRLR EMBL:AADN02028186
EMBL:AADN02028187 EMBL:AADN02028188 IPI:IPI00589441
Ensembl:ENSGALT00000012413 Uniprot:F1NJZ2
Length = 1755
Score = 294 (108.6 bits), Expect = 5.4e-49, Sum P(3) = 5.4e-49
Identities = 64/133 (48%), Positives = 77/133 (57%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ LRK +E +P + PIHDQ +Y
Sbjct: 1602 EKPGALWHIYAAKDAEKIRELLRKVGEEQGQE--NPPDH--DPIHDQSWYLDQTLRKRLY 1657
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSPE+V C RLT+EFR L
Sbjct: 1658 DEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHL 1717
Query: 688 PKNHRAREDKLEV 700
H EDKL+V
Sbjct: 1718 SNTHTNHEDKLQV 1730
Score = 285 (105.4 bits), Expect = 5.4e-49, Sum P(3) = 5.4e-49
Identities = 78/253 (30%), Positives = 122/253 (48%)
Query: 266 GTDMLCKAASREGSDDNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSW 325
G ++L S D L C + + ++FR + W +G+PV+V V K+ W
Sbjct: 1366 GLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFR--ECWKQGQPVLVSGVHKKLKSELW 1423
Query: 326 EPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEV--EISTRQFFKGYT----QGRTYDN 379
+P E E + +V ++C +C + ++ R F+ G+ + R+ D
Sbjct: 1424 KP--------EAFSLEFGDQ--DVDLVNC-RNCAIISDVKVRDFWDGFEIISKRLRSEDG 1472
Query: 380 FWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDL 439
P +LKLKDWPP + F D+MP ++ + LP EY+ R G LNLA +LPS ++PDL
Sbjct: 1473 -QPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDL 1530
Query: 440 GPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXXXXXQHSAVERLKKEHRAQ 499
GPK Y AYG+ R T LH D+SDAVN+ V + E A
Sbjct: 1531 GPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGTHDDEVLKTIDEGDAD 1590
Query: 500 DLKENLVQDGMDE 512
D+ + + +G ++
Sbjct: 1591 DVTKQRIHEGREK 1603
Score = 76 (31.8 bits), Expect = 5.4e-49, Sum P(3) = 5.4e-49
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 88 QICEEQTQEIEFEASIQRVHSSKVGVSETLCGNDERVYCNHCATSIIDLHRSCPKCSYEL 147
Q C+ E E ++ H KV + G R C+ C T++ ++H C KC + +
Sbjct: 991 QFCQLVMSEKEAMMMVEP-HQ-KVAWKRAVRG--VREMCDVCETTLFNIHWVCRKCGFGV 1046
Query: 148 CLTC 151
CL C
Sbjct: 1047 CLDC 1050
Score = 42 (19.8 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 510 MDE-SIEEPNSDNNKEDTDVSEINDSE 535
+DE S+ ++ ++D+S+++DSE
Sbjct: 801 LDERSLTSKQDSDSSTNSDLSDLSDSE 827
Score = 38 (18.4 bits), Expect = 2.4e-23, Sum P(3) = 2.4e-23
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 309 EPVIVRNVLDKVTGLSWEPMVMWRALC 335
E V+ NVLD T SW + R LC
Sbjct: 1362 EMVMGLNVLDPHTSHSW--LCDGRLLC 1386
>UNIPROTKB|F1RH75 [details] [associations]
symbol:KDM3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 OMA:IICKRLR EMBL:CU856219
EMBL:CU928408 Ensembl:ENSSSCT00000015658 Uniprot:F1RH75
Length = 1766
Score = 294 (108.6 bits), Expect = 7.1e-49, Sum P(3) = 7.1e-49
Identities = 64/133 (48%), Positives = 77/133 (57%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ LRK +E +P + PIHDQ +Y
Sbjct: 1613 EKPGALWHIYAAKDAEKIRELLRKVGEEQGQE--NPPDH--DPIHDQSWYLDQTLRKRLY 1668
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSPE+V C RLT+EFR L
Sbjct: 1669 EEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHL 1728
Query: 688 PKNHRAREDKLEV 700
H EDKL+V
Sbjct: 1729 SNTHTNHEDKLQV 1741
Score = 284 (105.0 bits), Expect = 7.1e-49, Sum P(3) = 7.1e-49
Identities = 77/253 (30%), Positives = 123/253 (48%)
Query: 266 GTDMLCKAASREGSDDNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSW 325
G ++L S D L C + + ++FR + W +G+PV+V V K+ W
Sbjct: 1378 GLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFR--ECWKQGQPVLVSGVHKKLKSELW 1435
Query: 326 EPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEV--EISTRQFFKGYT----QGRTYDN 379
+P E E + +V ++C +C + ++ R F+ G+ + R+ D
Sbjct: 1436 KP--------EAFSQEFGDQ--DVDLVNC-RNCAIISDVKVRDFWDGFEIICKRLRSEDG 1484
Query: 380 FWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDL 439
P +LKLKDWPP + F D+MP ++ + LP EY+ R G LNLA +LPS ++PDL
Sbjct: 1485 -QPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDL 1542
Query: 440 GPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXXXXXQHSAVERLKKEHRAQ 499
GPK Y AYG+ R T LH D+SDAVN+ ++ + E A
Sbjct: 1543 GPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIEGAHDEEVLKTID-EGDAD 1601
Query: 500 DLKENLVQDGMDE 512
++ + + DG ++
Sbjct: 1602 EVTKQRIHDGKEK 1614
Score = 76 (31.8 bits), Expect = 7.1e-49, Sum P(3) = 7.1e-49
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 88 QICEEQTQEIEFEASIQRVHSSKVGVSETLCGNDERVYCNHCATSIIDLHRSCPKCSYEL 147
Q C+ E E ++ H KV + G R C+ C T++ ++H C KC + +
Sbjct: 1003 QFCQLVMSEKEAMMMVEP-HQ-KVAWKRAVRG--VREMCDVCETTLFNIHWVCRKCGFGV 1058
Query: 148 CLTC 151
CL C
Sbjct: 1059 CLDC 1062
Score = 38 (18.4 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 309 EPVIVRNVLDKVTGLSWEPMVMWRALC 335
E V+ NVLD T SW + R LC
Sbjct: 1374 EMVMGLNVLDPHTSHSW--LCDGRLLC 1398
Score = 37 (18.1 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 10/38 (26%), Positives = 23/38 (60%)
Query: 510 MDE-SIEEPNSDNNKEDTDVSEINDSE---LLPSGIRG 543
+DE S+ ++ ++D+S+++DSE +G++G
Sbjct: 805 LDERSLACRQDSDSSTNSDLSDLSDSEEQLQAKTGLKG 842
>UNIPROTKB|Q9Y4C1 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001047 "core promoter binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007290 "spermatid nucleus elongation"
evidence=IEA] [GO:0036123 "histone H3-K9 dimethylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051573
"negative regulation of histone H3-K9 methylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005506 "iron ion
binding" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009755 "hormone-mediated signaling pathway" evidence=IDA]
[GO:0030521 "androgen receptor signaling pathway" evidence=IDA]
[GO:0033169 "histone H3-K9 demethylation" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0046293 "formaldehyde biosynthetic process" evidence=IDA]
[GO:0050681 "androgen receptor binding" evidence=IDA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CH471053
GO:GO:0030154 GO:GO:0030521 GO:GO:0005506 GO:GO:0007283
GO:GO:0006351 GO:GO:0016702 GO:GO:0009755 GO:GO:0033169
Pathway_Interaction_DB:ar_pathway GO:GO:0050681 EMBL:AC068288
eggNOG:NOG305537 CTD:55818 KO:K15601 OrthoDB:EOG4FFD0Z
EMBL:AB018285 EMBL:AL832150 EMBL:BX640698 EMBL:CR749581
IPI:IPI00479545 RefSeq:NP_001140160.1 RefSeq:NP_060903.2
UniGene:Hs.557425 ProteinModelPortal:Q9Y4C1 IntAct:Q9Y4C1
STRING:Q9Y4C1 PhosphoSite:Q9Y4C1 DMDM:308153659 PaxDb:Q9Y4C1
PRIDE:Q9Y4C1 Ensembl:ENST00000312912 Ensembl:ENST00000409064
Ensembl:ENST00000409556 GeneID:55818 KEGG:hsa:55818 UCSC:uc002sri.4
GeneCards:GC02P086667 H-InvDB:HIX0002238 HGNC:HGNC:20815 MIM:611512
neXtProt:NX_Q9Y4C1 PharmGKB:PA164721293 InParanoid:Q9Y4C1
BindingDB:Q9Y4C1 ChEMBL:CHEMBL1938209 ChiTaRS:KDM3A
GenomeRNAi:55818 NextBio:61002 ArrayExpress:Q9Y4C1 Bgee:Q9Y4C1
CleanEx:HS_JMJD1A Genevestigator:Q9Y4C1 GermOnline:ENSG00000115548
GO:GO:0046293 Uniprot:Q9Y4C1
Length = 1321
Score = 289 (106.8 bits), Expect = 3.4e-48, Sum P(3) = 3.4e-48
Identities = 61/133 (45%), Positives = 77/133 (57%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ +L+K +E +P + PIHDQ +Y
Sbjct: 1168 EKPGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQSWYLDRSLRKRLH 1223
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L
Sbjct: 1224 QEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYL 1283
Query: 688 PKNHRAREDKLEV 700
+ H EDKL+V
Sbjct: 1284 SQTHTNHEDKLQV 1296
Score = 271 (100.5 bits), Expect = 3.4e-48, Sum P(3) = 3.4e-48
Identities = 68/195 (34%), Positives = 102/195 (52%)
Query: 281 DNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDS 340
DN L C + + +FR + W +G+PV+V V K+ W+P E+
Sbjct: 948 DNRLLCLQDPNNKSNWNVFR--ECWKQGQPVMVSGVHHKLNSELWKP--------ESFRK 997
Query: 341 EVSSKMSEVKAIDCLASCEVEIST-RQFFKGYTQ--GRTYDNFWPEMLKLKDWPPSDKFE 397
E + EV ++C + + +T F+ G+ R + P +LKLKDWPP + F
Sbjct: 998 EFGEQ--EVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFR 1055
Query: 398 DLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGD 457
D+MP D+ ++ +P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R
Sbjct: 1056 DMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKY 1114
Query: 458 SVTKLHCDMSDAVNI 472
T LH D+SDA N+
Sbjct: 1115 GTTNLHLDVSDAANV 1129
Score = 83 (34.3 bits), Expect = 3.4e-48, Sum P(3) = 3.4e-48
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 123 RVYCNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRAEMKFQYV 171
R C+ C T+I +LH CP+C + +C+ C + + G A F ++
Sbjct: 659 REMCDVCDTTIFNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFSWL 707
>UNIPROTKB|F1SVC8 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:CU467088 EMBL:CU928755
RefSeq:XP_003124983.3 Ensembl:ENSSSCT00000009003 GeneID:100517522
KEGG:ssc:100517522 Uniprot:F1SVC8
Length = 1323
Score = 289 (106.8 bits), Expect = 4.3e-48, Sum P(3) = 4.3e-48
Identities = 61/133 (45%), Positives = 77/133 (57%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ +L+K +E +P + PIHDQ +Y
Sbjct: 1170 EKPGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQSWYLDRSLRKRLH 1225
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L
Sbjct: 1226 QEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYL 1285
Query: 688 PKNHRAREDKLEV 700
+ H EDKL+V
Sbjct: 1286 SQTHTNHEDKLQV 1298
Score = 270 (100.1 bits), Expect = 4.3e-48, Sum P(3) = 4.3e-48
Identities = 68/195 (34%), Positives = 103/195 (52%)
Query: 281 DNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDS 340
DN L C + + +FR + W +G+PV+V V K+ W+P E+
Sbjct: 950 DNRLLCLQDPNNKSNWNVFR--ECWKQGQPVMVSGVHHKLNTELWKP--------ESFRK 999
Query: 341 EVSSKMSEVKAIDCLASCEVEIST-RQFFKGYTQ--GRTYDNFWPEMLKLKDWPPSDKFE 397
E ++ EV ++C + + +T F+ G+ R + P +LKLKDWPP + F
Sbjct: 1000 EFGNQ--EVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFR 1057
Query: 398 DLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGD 457
D+MP D+ ++ +P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R
Sbjct: 1058 DMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKY 1116
Query: 458 SVTKLHCDMSDAVNI 472
T LH D+SDA N+
Sbjct: 1117 GTTNLHLDVSDAANV 1131
Score = 83 (34.3 bits), Expect = 4.3e-48, Sum P(3) = 4.3e-48
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 123 RVYCNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRAEMKFQYV 171
R C+ C T+I +LH CP+C + +C+ C + + G A F ++
Sbjct: 661 REMCDVCDTTIFNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFSWL 709
>UNIPROTKB|E1BFC2 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:DAAA02031122
IPI:IPI00709258 RefSeq:NP_001179801.1 UniGene:Bt.52403 PRIDE:E1BFC2
Ensembl:ENSBTAT00000018069 GeneID:536073 KEGG:bta:536073
NextBio:20876880 Uniprot:E1BFC2
Length = 1320
Score = 289 (106.8 bits), Expect = 5.5e-48, Sum P(3) = 5.5e-48
Identities = 61/133 (45%), Positives = 77/133 (57%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ +L+K +E +P + PIHDQ +Y
Sbjct: 1167 EKPGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQSWYLDRSLRKRLH 1222
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L
Sbjct: 1223 QEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYL 1282
Query: 688 PKNHRAREDKLEV 700
+ H EDKL+V
Sbjct: 1283 SQTHTNHEDKLQV 1295
Score = 269 (99.8 bits), Expect = 5.5e-48, Sum P(3) = 5.5e-48
Identities = 68/195 (34%), Positives = 103/195 (52%)
Query: 281 DNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDS 340
DN L C + + +FR + W +G+PV+V V K+ W+P E+
Sbjct: 947 DNRLLCLQDPNNKSNWNVFR--ECWKQGQPVMVSGVHHKLNTELWKP--------ESFRR 996
Query: 341 EVSSKMSEVKAIDCLASCEVEIST-RQFFKGYTQ--GRTYDNFWPEMLKLKDWPPSDKFE 397
E ++ EV ++C + + +T F+ G+ R + P +LKLKDWPP + F
Sbjct: 997 EFGNQ--EVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFR 1054
Query: 398 DLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGD 457
D+MP D+ ++ +P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R
Sbjct: 1055 DMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKY 1113
Query: 458 SVTKLHCDMSDAVNI 472
T LH D+SDA N+
Sbjct: 1114 GTTNLHLDVSDAANV 1128
Score = 83 (34.3 bits), Expect = 5.5e-48, Sum P(3) = 5.5e-48
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 123 RVYCNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRAEMKFQYV 171
R C+ C T+I +LH CP+C + +C+ C + + G A F ++
Sbjct: 658 REMCDVCDTTIFNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFNWL 706
Score = 38 (18.4 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 436 KPDLGPKTYIAYGVAEELGRGDSVT 460
KPD+ K + + ++G GD T
Sbjct: 356 KPDVACKVDLLSSKSSQIGTGDLKT 380
>UNIPROTKB|E2QWU9 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:AAEX03010929
RefSeq:XP_532973.3 Ensembl:ENSCAFT00000012063 GeneID:475763
KEGG:cfa:475763 NextBio:20851540 Uniprot:E2QWU9
Length = 1322
Score = 289 (106.8 bits), Expect = 5.5e-48, Sum P(3) = 5.5e-48
Identities = 61/133 (45%), Positives = 77/133 (57%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ +L+K +E +P + PIHDQ +Y
Sbjct: 1169 EKPGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQSWYLDRSLRKRLH 1224
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L
Sbjct: 1225 QEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYL 1284
Query: 688 PKNHRAREDKLEV 700
+ H EDKL+V
Sbjct: 1285 SQTHTNHEDKLQV 1297
Score = 269 (99.8 bits), Expect = 5.5e-48, Sum P(3) = 5.5e-48
Identities = 68/195 (34%), Positives = 103/195 (52%)
Query: 281 DNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDS 340
DN L C + + +FR + W +G+PV+V V K+ W+P E+
Sbjct: 949 DNRLLCLQDPNNKSNWNVFR--ECWKQGQPVMVSGVHHKLNTDLWKP--------ESFRK 998
Query: 341 EVSSKMSEVKAIDCLASCEVEIST-RQFFKGYTQ--GRTYDNFWPEMLKLKDWPPSDKFE 397
E ++ EV ++C + + +T F+ G+ R + P +LKLKDWPP + F
Sbjct: 999 EFGNQ--EVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFR 1056
Query: 398 DLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGD 457
D+MP D+ ++ +P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R
Sbjct: 1057 DMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKY 1115
Query: 458 SVTKLHCDMSDAVNI 472
T LH D+SDA N+
Sbjct: 1116 GTTNLHLDVSDAANV 1130
Score = 83 (34.3 bits), Expect = 5.5e-48, Sum P(3) = 5.5e-48
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 123 RVYCNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRAEMKFQYV 171
R C+ C T+I +LH CP+C + +C+ C + + G A F ++
Sbjct: 660 REMCDVCDTTIFNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFSWL 708
>MGI|MGI:98847 [details] [associations]
symbol:Kdm3a "lysine (K)-specific demethylase 3A"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005506 "iron ion binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007290 "spermatid
nucleus elongation" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=ISO] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0036123 "histone H3-K9
dimethylation" evidence=IMP;IDA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046293 "formaldehyde biosynthetic
process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:98847 GO:GO:0005634 GO:GO:0005737
GO:GO:0030521 GO:GO:0005506 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0001047 GO:GO:0009755
GO:GO:0033169 GO:GO:0000976 GO:GO:0051573 GO:GO:0007290
GeneTree:ENSGT00530000063039 eggNOG:NOG305537 CTD:55818 KO:K15601
OrthoDB:EOG4FFD0Z GO:GO:0046293 EMBL:AK129204 EMBL:BC026605
EMBL:BC031158 EMBL:BC031200 EMBL:BC059264 EMBL:AK144825
EMBL:AK166797 EMBL:DQ323991 IPI:IPI00460716 IPI:IPI00755968
RefSeq:NP_001033784.2 RefSeq:NP_766589.1 UniGene:Mm.260479
ProteinModelPortal:Q6PCM1 IntAct:Q6PCM1 STRING:Q6PCM1
PhosphoSite:Q6PCM1 PaxDb:Q6PCM1 PRIDE:Q6PCM1
Ensembl:ENSMUST00000065509 Ensembl:ENSMUST00000167220 GeneID:104263
KEGG:mmu:104263 UCSC:uc009cgy.2 InParanoid:Q6PCM1 OMA:RRLQFNK
NextBio:356834 Bgee:Q6PCM1 CleanEx:MM_JMJD1A Genevestigator:Q6PCM1
GermOnline:ENSMUSG00000053470 GO:GO:0036123 Uniprot:Q6PCM1
Length = 1323
Score = 289 (106.8 bits), Expect = 3.8e-47, Sum P(3) = 3.8e-47
Identities = 61/133 (45%), Positives = 77/133 (57%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ +L+K +E +P + PIHDQ +Y
Sbjct: 1170 EKPGALWHIYAAKDTEKIREFLKKVSEE--QGQDNPADH--DPIHDQSWYLDRSLRKRLY 1225
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L
Sbjct: 1226 QEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYL 1285
Query: 688 PKNHRAREDKLEV 700
+ H EDKL+V
Sbjct: 1286 SQTHTNHEDKLQV 1298
Score = 259 (96.2 bits), Expect = 3.8e-47, Sum P(3) = 3.8e-47
Identities = 68/197 (34%), Positives = 103/197 (52%)
Query: 281 DNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDS 340
DN L C + + +FR + W +G+PV+V V K+ W+P E+
Sbjct: 948 DNRLLCLQDPNNKSNWNVFR--ECWKQGQPVMVSGVHHKLNTELWKP--------ESFRK 997
Query: 341 EVSSKMSEVKAIDCLASCEVEIST-RQFFKGYTQ--GRTYDNFW--PEMLKLKDWPPSDK 395
E + EV ++C + + +T F+ G+ R ++ P +LKLKDWPP +
Sbjct: 998 EFGEQ--EVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGED 1055
Query: 396 FEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGR 455
F D+MP D+ ++ +P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R
Sbjct: 1056 FRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDR 1114
Query: 456 GDSVTKLHCDMSDAVNI 472
T LH D+SDA N+
Sbjct: 1115 KYGTTNLHLDVSDAANV 1131
Score = 85 (35.0 bits), Expect = 3.8e-47, Sum P(3) = 3.8e-47
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 123 RVYCNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRAEMKFQYV 171
R C+ C T+I +LH CP+C + +C+ C + + G A F ++
Sbjct: 659 REMCDVCDTTIFNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFSWI 707
>RGD|708351 [details] [associations]
symbol:Kdm3a "lysine (K)-specific demethylase 3A" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005506 "iron ion
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0007290 "spermatid nucleus
elongation" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0009755 "hormone-mediated signaling pathway"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030521 "androgen receptor signaling pathway"
evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0036123 "histone H3-K9 dimethylation"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046293 "formaldehyde biosynthetic process" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 RGD:708351 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0007283 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
eggNOG:NOG305537 CTD:55818 HOGENOM:HOG000007471 KO:K15601
EMBL:X59993 IPI:IPI00566177 PIR:S28499 RefSeq:NP_786940.1
UniGene:Rn.10541 ProteinModelPortal:Q63679 STRING:Q63679
PRIDE:Q63679 GeneID:312440 KEGG:rno:312440 UCSC:RGD:708351
NextBio:664882 ArrayExpress:Q63679 Genevestigator:Q63679
GermOnline:ENSRNOG00000007814 Uniprot:Q63679
Length = 1214
Score = 287 (106.1 bits), Expect = 5.5e-47, Sum P(3) = 5.5e-47
Identities = 61/133 (45%), Positives = 77/133 (57%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ +L+K +E +P + PIHDQ +Y
Sbjct: 1054 EKPGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQSWYLDRSLRKRLY 1109
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L
Sbjct: 1110 QEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRHL 1169
Query: 688 PKNHRAREDKLEV 700
+ H EDKL+V
Sbjct: 1170 SQTHTNHEDKLQV 1182
Score = 259 (96.2 bits), Expect = 5.5e-47, Sum P(3) = 5.5e-47
Identities = 67/197 (34%), Positives = 102/197 (51%)
Query: 281 DNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDS 340
DN L C + + +FR + W +G+PV+V V K+ W+P E+
Sbjct: 832 DNRLLCLQDPNNKSNWNVFR--ECWKQGQPVMVSGVHHKLNTELWKP--------ESFRK 881
Query: 341 EVSSKMSEVKAIDCLASCEVEIST-RQFFKGY----TQGRTYDNFWPEMLKLKDWPPSDK 395
E + EV ++C + + +T F+ G+ + + P +LKLKDWPP +
Sbjct: 882 EFGEQ--EVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGED 939
Query: 396 FEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGR 455
F D+MP D+ ++ +P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R
Sbjct: 940 FRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDR 998
Query: 456 GDSVTKLHCDMSDAVNI 472
T LH D+SDA N+
Sbjct: 999 KYGTTNLHLDVSDAANV 1015
Score = 84 (34.6 bits), Expect = 5.5e-47, Sum P(3) = 5.5e-47
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 123 RVYCNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRAEMKFQYV 171
R C+ C T+I +LH CP+C + +C+ C + + G A F ++
Sbjct: 543 REMCDVCDTTIFNLHWVCPRCGFGVCVDCYRLKRKNCQQGAAYKTFSWI 591
>UNIPROTKB|Q5ZIX8 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000433
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00291
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 eggNOG:NOG305537 EMBL:AJ720656 IPI:IPI00821166
RefSeq:NP_001012909.1 UniGene:Gga.17648 ProteinModelPortal:Q5ZIX8
GeneID:422917 KEGG:gga:422917 CTD:55818 HOGENOM:HOG000007471
KO:K15601 OrthoDB:EOG4FFD0Z NextBio:20825473 Uniprot:Q5ZIX8
Length = 1325
Score = 291 (107.5 bits), Expect = 5.4e-46, Sum P(4) = 5.4e-46
Identities = 62/133 (46%), Positives = 77/133 (57%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ +L+K +E +PV+ PIHDQ +Y
Sbjct: 1172 EKPGALWHIYAAKDTEKIREFLKKVAEEQGQE--NPVDH--DPIHDQSWYLDRSLRKRLH 1227
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L
Sbjct: 1228 QEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYL 1287
Query: 688 PKNHRAREDKLEV 700
H EDKL+V
Sbjct: 1288 SHTHTNHEDKLQV 1300
Score = 268 (99.4 bits), Expect = 5.4e-46, Sum P(4) = 5.4e-46
Identities = 83/241 (34%), Positives = 119/241 (49%)
Query: 250 ILDNKLTNLRQNRAETGTDMLCKAASRE------GSD-------DNLLYCPDSTKIQEDE 296
ILD+ +L QNR T TDM K G D DN L C + +
Sbjct: 909 ILDDIFASLVQNR--TVTDMPKKPQGLTIKPTIMGFDTPHYWLCDNRLLCLQDPNNESNW 966
Query: 297 ELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLA 356
+FR + W +G+PV+V V K+ W P E+ E + EV ++C
Sbjct: 967 NVFR--ECWKQGQPVMVSGVHHKLNADLWRP--------ESFRKEFGQQ--EVDLVNCRT 1014
Query: 357 SCEVEIST-RQFFKGY----TQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISAL 411
+ + +T F+ G+ ++ RT + P +LKLKDWPP + F D+MP D+ + +
Sbjct: 1015 NEIITGATVGDFWDGFEDISSRLRTEEGE-PMVLKLKDWPPGEDFRDMMPSRFDDLMKNI 1073
Query: 412 PFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVN 471
P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R T LH D+SDA N
Sbjct: 1074 PLPEYTR-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAAN 1132
Query: 472 I 472
+
Sbjct: 1133 V 1133
Score = 68 (29.0 bits), Expect = 5.4e-46, Sum P(4) = 5.4e-46
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 123 RVYCNHCATSIIDLHRSCPKCSYELCLTC 151
R C+ C T+I +L C KC + +C+ C
Sbjct: 666 REMCDVCDTTIFNLRWVCSKCGFGVCVDC 694
Score = 39 (18.8 bits), Expect = 5.4e-46, Sum P(4) = 5.4e-46
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 80 VSLLPFIRQICEEQTQEI 97
++L P + I +EQTQ I
Sbjct: 352 LTLFPKVTYITKEQTQNI 369
>FB|FBgn0037703 [details] [associations]
symbol:JHDM2 "JmjC domain-containing histone demethylase 2"
species:7227 "Drosophila melanogaster" [GO:2001020 "regulation of
response to DNA damage stimulus" evidence=IGI] [GO:0005634
"nucleus" evidence=ISM] [GO:0032452 "histone demethylase activity"
evidence=ISM] [GO:0016577 "histone demethylation" evidence=ISM]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
EMBL:AE014297 GO:GO:0005634 GeneTree:ENSGT00530000063039
eggNOG:NOG305537 GO:GO:0032452 KO:K15601 EMBL:BT003787
RefSeq:NP_788611.1 UniGene:Dm.26190 MINT:MINT-1601605
EnsemblMetazoa:FBtr0082063 GeneID:41143 KEGG:dme:Dmel_CG8165
UCSC:CG8165-RA CTD:41143 FlyBase:FBgn0037703 InParanoid:Q9VHC5
OMA:SHTNHED OrthoDB:EOG4XPNWR GenomeRNAi:41143 NextBio:822388
Uniprot:Q9VHC5
Length = 854
Score = 265 (98.3 bits), Expect = 1.9e-45, Sum P(3) = 1.9e-45
Identities = 61/132 (46%), Positives = 74/132 (56%)
Query: 571 GALWDIFRRQDVPKLEAYLRKHFKE--FRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXXX 628
GALW IF +D K+ L + E FR +E PIHDQ +Y
Sbjct: 696 GALWHIFPARDADKIRDLLNRVTLEKGFR------LEPDHDPIHDQNWYLDDKLRARLFK 749
Query: 629 XFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLLP 688
+GVE Q LG+AVFIPAG PHQV+NL +C KVA DFVSPEN+ C LT EFR L
Sbjct: 750 EYGVEGHPIVQCLGDAVFIPAGAPHQVQNLHNCIKVAEDFVSPENITHCYHLTHEFRRLS 809
Query: 689 KNHRAREDKLEV 700
+H EDKL++
Sbjct: 810 HSHTNHEDKLQI 821
Score = 246 (91.7 bits), Expect = 1.9e-45, Sum P(3) = 1.9e-45
Identities = 71/197 (36%), Positives = 100/197 (50%)
Query: 280 DDNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVD 339
D LL D+ + D + FQ+ W G+PV++ V + W P +A C
Sbjct: 472 DGRLLRLTDA--MHPDNRVL-FQEVWKCGQPVMISEVARSLNLDLWHP----QAFCR--- 521
Query: 340 SEVSSKMSEVKAIDCLASCEVEIST-RQFFKGYT--QGRTYDNFW-PEMLKLKDWPPSDK 395
+ K +++ I+CL V R F++G+ R D + P +LKLKDWPP D
Sbjct: 522 -DFGDKPNDL--INCLNGNLVPNQPMRHFWEGFQCMTKRLPDAYGKPMLLKLKDWPPGDD 578
Query: 396 FEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGR 455
F +++P + + LP EY+ R G LN+A LP + PDLGPK Y AYG A +
Sbjct: 579 FAEILPTRFADLMKGLPMPEYT-LRTGNLNIASCLPKMFVPPDLGPKMYNAYGSALHPDK 637
Query: 456 GDSVTKLHCDMSDAVNI 472
G T LH D+SDAVNI
Sbjct: 638 G--TTNLHLDISDAVNI 652
Score = 99 (39.9 bits), Expect = 1.9e-45, Sum P(3) = 1.9e-45
Identities = 28/96 (29%), Positives = 43/96 (44%)
Query: 88 QICEEQTQEIEFEASIQRVHSSKVGVSETLCGNDERVYCNHCATSIIDLHRSCPKCSYEL 147
Q C QE E S+ + + + + G E C+ C T++ + H +C KC + +
Sbjct: 208 QFCYIWHQEAE-ALSLHQNTDGTIAWKKAVKGTRE--ICDVCDTTLFNYHWTCRKCGFGV 264
Query: 148 CLTCCKEICEGRLSGRAEMKFQYVNRGYGYMQGGDP 183
CL C K+ EG RAE Q Y ++ DP
Sbjct: 265 CLDCVKDRKEGLRLRRAENAAQKGCDEYHWLLCSDP 300
Score = 39 (18.8 bits), Expect = 3.5e-39, Sum P(3) = 3.5e-39
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 67 TDCEKVEHLRYLMVSLLPFIRQICEEQTQEIEFEASIQRVHSS 109
TD + + + ++ LP R CE + ++ E +Q+ S
Sbjct: 31 TDPKSIIEI-HIFNDSLPIKRACCEVENPTLKAEQRVQQEEES 72
>UNIPROTKB|E1C232 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007290
"spermatid nucleus elongation" evidence=IEA] [GO:0009755
"hormone-mediated signaling pathway" evidence=IEA] [GO:0030521
"androgen receptor signaling pathway" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046293 "formaldehyde biosynthetic process" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051573
"negative regulation of histone H3-K9 methylation" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039
GO:GO:0046293 OMA:RRLQFNK EMBL:AADN02014773 IPI:IPI00586981
Ensembl:ENSGALT00000025482 ArrayExpress:E1C232 Uniprot:E1C232
Length = 1333
Score = 273 (101.2 bits), Expect = 9.0e-45, Sum P(4) = 9.0e-45
Identities = 62/139 (44%), Positives = 77/139 (55%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +D K+ +L+K +E +PV+ PIHDQ +Y
Sbjct: 1174 EKPGALWHIYAAKDTEKIREFLKKVAEEQGQE--NPVDH--DPIHDQSWYLDRSLRKRLH 1229
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVR------NLKSCTKVAVDFVSPENVDECLRLT 681
+GV+ W Q LG+ VFIPAG PHQ R NL SC KVA DFVSPE+V C LT
Sbjct: 1230 QEYGVQGWAIVQFLGDVVFIPAGAPHQARTTGTVHNLYSCIKVAEDFVSPEHVKHCFWLT 1289
Query: 682 KEFRLLPKNHRAREDKLEV 700
+EFR L H EDKL+V
Sbjct: 1290 QEFRYLSHTHTNHEDKLQV 1308
Score = 268 (99.4 bits), Expect = 9.0e-45, Sum P(4) = 9.0e-45
Identities = 83/241 (34%), Positives = 119/241 (49%)
Query: 250 ILDNKLTNLRQNRAETGTDMLCKAASRE------GSD-------DNLLYCPDSTKIQEDE 296
ILD+ +L QNR T TDM K G D DN L C + +
Sbjct: 911 ILDDIFASLVQNR--TVTDMPKKPQGLTIKPTIMGFDTPHYWLCDNRLLCLQDPNNESNW 968
Query: 297 ELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLA 356
+FR + W +G+PV+V V K+ W P E+ E + EV ++C
Sbjct: 969 NVFR--ECWKQGQPVMVSGVHHKLNADLWRP--------ESFRKEFGQQ--EVDLVNCRT 1016
Query: 357 SCEVEIST-RQFFKGY----TQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISAL 411
+ + +T F+ G+ ++ RT + P +LKLKDWPP + F D+MP D+ + +
Sbjct: 1017 NEIITGATVGDFWDGFEDISSRLRTEEGE-PMVLKLKDWPPGEDFRDMMPSRFDDLMKNI 1075
Query: 412 PFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVN 471
P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R T LH D+SDA N
Sbjct: 1076 PLPEYTR-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAAN 1134
Query: 472 I 472
+
Sbjct: 1135 V 1135
Score = 76 (31.8 bits), Expect = 9.0e-45, Sum P(4) = 9.0e-45
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 123 RVYCNHCATSIIDLHRSCPKCSYELCLTC 151
R C+ C T+I +LH C KC + +C+ C
Sbjct: 668 REMCDVCDTTIFNLHWVCSKCGFGVCVDC 696
Score = 39 (18.8 bits), Expect = 9.0e-45, Sum P(4) = 9.0e-45
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 80 VSLLPFIRQICEEQTQEI 97
++L P + I +EQTQ I
Sbjct: 354 LTLFPKVTYITKEQTQNI 371
>UNIPROTKB|Q15652 [details] [associations]
symbol:JMJD1C "Probable JmjC domain-containing histone
demethylation protein 2C" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0046966 "thyroid
hormone receptor binding" evidence=TAS] [GO:0005622 "intracellular"
evidence=NAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007596
"blood coagulation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_604 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0005654 GO:GO:0006355
GO:GO:0046872 GO:GO:0007596 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 GO:GO:0046966 EMBL:EF068222 EMBL:BX537954
EMBL:AL713895 EMBL:AL590502 EMBL:AL607128 EMBL:AC022022
EMBL:AK027280 EMBL:AL831917 EMBL:AB037801 EMBL:L40411
IPI:IPI00384202 IPI:IPI00902772 IPI:IPI01012411 RefSeq:NP_004232.2
RefSeq:NP_116165.1 UniGene:Hs.413416 PDB:2YPD PDBsum:2YPD
ProteinModelPortal:Q15652 IntAct:Q15652 STRING:Q15652
PhosphoSite:Q15652 DMDM:85541650 PaxDb:Q15652 PRIDE:Q15652
Ensembl:ENST00000399251 Ensembl:ENST00000399262
Ensembl:ENST00000542921 GeneID:221037 KEGG:hsa:221037
UCSC:uc001jml.3 CTD:221037 GeneCards:GC10M064926 HGNC:HGNC:12313
MIM:604503 neXtProt:NX_Q15652 PharmGKB:PA128394767 eggNOG:NOG305537
HOVERGEN:HBG079631 InParanoid:Q15652 KO:K11449 OMA:YKMKHSV
OrthoDB:EOG447FS9 ChiTaRS:JMJD1C GenomeRNAi:221037 NextBio:91161
ArrayExpress:Q15652 Bgee:Q15652 CleanEx:HS_JMJD1C
Genevestigator:Q15652 GermOnline:ENSG00000171988 Uniprot:Q15652
Length = 2540
Score = 233 (87.1 bits), Expect = 1.0e-34, Sum P(3) = 1.0e-34
Identities = 62/222 (27%), Positives = 111/222 (50%)
Query: 301 FQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEV 360
F++ W +G+P +V V K+ +S +W+A E++ + +++ ++C S
Sbjct: 2182 FKECWKQGQPAVVSGVHKKMN-IS-----LWKA--ESISLDFGDHQADL--LNCKDSIIS 2231
Query: 361 EISTRQFFKGYTQ-GRTYDNFWPE--MLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYS 417
+ ++F+ G+ + + N E +LKLKDWP + F+ +MP ++ + +LP EY
Sbjct: 2232 NANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYC 2291
Query: 418 DPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXX 477
+P G NLA LP ++PDLGP+ AYGV T LH ++SD VNI
Sbjct: 2292 NPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVG 2350
Query: 478 XXXXXXXQHSAVERLKKEHRAQDLKENLVQDGMDESIEEPNS 519
A + K+ +DL +++++ + +S E P +
Sbjct: 2351 IAKGNGILSKA--GILKKFEEEDL-DDILRKRLKDSSEIPGA 2389
Score = 219 (82.2 bits), Expect = 1.0e-34, Sum P(3) = 1.0e-34
Identities = 54/133 (40%), Positives = 73/133 (54%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +DV K+ +L+K KE + + P PI DQ +Y
Sbjct: 2385 EIPGALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNKKLRQRLL 2440
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV T Q LG+A+ +PAG HQV+N SC +V DFVSPE++ E LT+E RLL
Sbjct: 2441 EEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLL 2500
Query: 688 PKNHRAREDKLEV 700
K +DKL+V
Sbjct: 2501 -KEEINYDDKLQV 2512
Score = 75 (31.5 bits), Expect = 1.0e-34, Sum P(3) = 1.0e-34
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 123 RVYCNHCATSIIDLHRSCPKCSYELCLTCCK 153
R C+ C ++ ++H C KC + +CL C K
Sbjct: 1843 REMCDACEATLFNIHWVCQKCGFVVCLDCYK 1873
Score = 45 (20.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 510 MDESIEEPNSDNNKEDTDVSEINDSELLP 538
+D ++E ++ E + VS+ N ++LLP
Sbjct: 452 VDTQLQEDMIIHSSEQSTVSDHNSNDLLP 480
Score = 44 (20.5 bits), Expect = 3.7e-15, Sum P(3) = 3.7e-15
Identities = 22/88 (25%), Positives = 42/88 (47%)
Query: 490 ERLKKEHRAQDLKENLVQDGMDESIEEPNSD--NNKEDTDVSEIND--SEL--LPSGIRG 543
E+ +E + ++ KE +++ + E E+ NS+ N + VS+ N+ S L L + G
Sbjct: 2017 EQKAREEKKEN-KELTLENQIKEEREQDNSESPNGRTSPLVSQNNEQGSTLRDLLTTTAG 2075
Query: 544 EFKMSRDEMQGTAFTCPHSEGTMVESGG 571
+ ++ + G AF +S G G
Sbjct: 2076 KLRVGSTDA-GIAFAPVYSMGAPSSKSG 2102
Score = 37 (18.1 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 403 HCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDL 439
H F+S PF +S LN P+ P L
Sbjct: 728 HISPFLSQHPFPLHSSSHRTCLNPGTHHPALTPAPHL 764
>MGI|MGI:1918614 [details] [associations]
symbol:Jmjd1c "jumonji domain containing 1C" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 MGI:MGI:1918614
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 GeneTree:ENSGT00530000063039 CTD:221037
eggNOG:NOG305537 HOVERGEN:HBG079631 KO:K11449 OrthoDB:EOG447FS9
ChiTaRS:JMJD1C EMBL:AK173162 EMBL:AC155712 EMBL:AC156272
EMBL:AK077400 EMBL:AK082106 EMBL:AK085500 EMBL:BC068318
IPI:IPI00749954 RefSeq:NP_001229325.1 UniGene:Mm.23846
IntAct:Q69ZK6 STRING:Q69ZK6 PhosphoSite:Q69ZK6 PRIDE:Q69ZK6
Ensembl:ENSMUST00000173689 GeneID:108829 KEGG:mmu:108829
UCSC:uc007fls.2 UCSC:uc011xfo.1 HOGENOM:HOG000113130
InParanoid:Q69ZK6 NextBio:361361 Bgee:Q69ZK6 CleanEx:MM_JMJD1C
Genevestigator:Q69ZK6 GermOnline:ENSMUSG00000037876 Uniprot:Q69ZK6
Length = 2350
Score = 226 (84.6 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 60/196 (30%), Positives = 102/196 (52%)
Query: 280 DDNLLYCPDSTKIQEDEELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVD 339
D ++L+ D K + +LF+ + W +G+P +V V K+ +S +W+A E++
Sbjct: 1974 DQHILWLKDY-KNSNNWKLFK--ECWKQGQPAVVSGVHKKMN-IS-----LWKA--ESIS 2022
Query: 340 SEVSSKMSEVKAIDCLASCEVEISTRQFFKGYTQ-GRTYDNFWPE--MLKLKDWPPSDKF 396
+ +++ ++C S + ++F+ G+ + + N E +LKLKD P + F
Sbjct: 2023 LDFGDHQADL--LNCKDSIVSNANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDF 2080
Query: 397 EDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRG 456
+ +MP ++F+ LP EY +P G NLA LP ++PDLGP+ AYGVA
Sbjct: 2081 KAMMPTRYEDFLRCLPLPEYCNPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHD 2139
Query: 457 DSVTKLHCDMSDAVNI 472
T LH + SD VN+
Sbjct: 2140 IGTTNLHIEASDVVNV 2155
Score = 216 (81.1 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 53/133 (39%), Positives = 73/133 (54%)
Query: 568 ESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXX 627
E GALW I+ +DV K+ +L+K KE + + P PI DQ +Y
Sbjct: 2195 EIPGALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNRKLRQRLL 2250
Query: 628 XXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLL 687
+GV T Q LG+A+ +PAG HQV+N SC +V DFVSPE++ + LT+E RLL
Sbjct: 2251 EEYGVRACTLIQFLGDAIVLPAGTLHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLL 2310
Query: 688 PKNHRAREDKLEV 700
K +DKL+V
Sbjct: 2311 -KEEINYDDKLQV 2322
Score = 71 (30.1 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 123 RVYCNHCATSIIDLHRSCPKCSYELCLTCCK 153
R C+ C ++ ++H C KC + CL C K
Sbjct: 1654 REMCDACEATLFNVHWVCRKCGFVACLDCYK 1684
Score = 61 (26.5 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 493 KKEHRAQDLKENLVQDGMDESIEEPNSDNNKEDTDVSEINDS--ELLPSGIRGEFKMSRD 550
K+E++ L+ + +DG ++ + PN + + +E + +LL + G+ ++
Sbjct: 1834 KQENKEFTLEREIKEDGDQDASDSPNGSTSPPASQSNEQGSTLRDLLTT-TAGKLRVGST 1892
Query: 551 EMQGTAFTCPHSEGTMVESGG 571
+ G AF +S GT GG
Sbjct: 1893 DA-GIAFAPVYSMGTSSGKGG 1912
Score = 37 (18.1 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 403 HCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDL 439
H F+S PF +S LN P+ P L
Sbjct: 547 HISPFLSQHPFSLHSSSHRTCLNPGTHHPALTPGPHL 583
>RGD|620634 [details] [associations]
symbol:Hr "hair growth associated" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA;ISO] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IDA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046966 "thyroid hormone receptor binding" evidence=IPI]
[GO:0051291 "protein heterooligomerization" evidence=IDA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:620634 GO:GO:0003714 GO:GO:0045892 GO:GO:0051291 GO:GO:0046872
GO:GO:0003677 GO:GO:0006351 GO:GO:0043433 GO:GO:0042826
GO:GO:0016604 GO:GO:0000118 CTD:55806 eggNOG:NOG243648
HOGENOM:HOG000293150 HOVERGEN:HBG000171 OrthoDB:EOG4DBTCW
EMBL:U71293 IPI:IPI00230844 RefSeq:NP_077340.2 UniGene:Rn.41543
ProteinModelPortal:P97609 STRING:P97609 PRIDE:P97609 GeneID:60563
KEGG:rno:60563 UCSC:RGD:620634 InParanoid:P97609 NextBio:612242
Genevestigator:P97609 GermOnline:ENSRNOG00000011427 Uniprot:P97609
Length = 1181
Score = 144 (55.7 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 37/120 (30%), Positives = 52/120 (43%)
Query: 573 LWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXXXXFGV 632
+W +FR QD ++ +L+ + C + P Y +GV
Sbjct: 1045 VWHVFRAQDAQRIRRFLQ--------MVCPAGAGTLEPGAPGSCYLDSGLRRRLREEWGV 1096
Query: 633 EPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLLPKNHR 692
WT Q GEAV +PAG PHQV+ L S V F+SPE +L + LP +HR
Sbjct: 1097 SCWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLCHQGASLPPDHR 1156
Score = 129 (50.5 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 51/177 (28%), Positives = 82/177 (46%)
Query: 299 FR-FQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLAS 357
FR FQ+HW +G+PV+V + K LS +W +++ + + +V+ + L
Sbjct: 851 FRLFQEHWRQGQPVLVSGI-QKTLRLS-----LW-----GMEA-LGTLGGQVQTLTALGP 898
Query: 358 CE-VEISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEY 416
+ + + F+KG++ + L P DK E + + S+LP EY
Sbjct: 899 PQPTSLDSTAFWKGFSHPEARPKLDEGSVLLLHRPLGDKDESRV----ENLASSLPLPEY 954
Query: 417 SDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHC-DMSDAVNI 472
G LNLA LP G+ L P+ + AYGV RG TK C ++SD ++I
Sbjct: 955 C-AHQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSH--RGHLGTKNLCVEVSDLISI 1008
Score = 67 (28.6 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 126 CNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSG 162
C+ C + + H C CS+ LC+ C GR++G
Sbjct: 594 CSRCHHGLFNTHWRCSHCSHRLCVAC------GRIAG 624
Score = 42 (19.8 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 183 PLPESCLHQ 191
PLPE C HQ
Sbjct: 950 PLPEYCAHQ 958
Score = 37 (18.1 bits), Expect = 4.6e-13, Sum P(3) = 4.6e-13
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 214 PPTEMGGC 221
PPT GGC
Sbjct: 319 PPTPPGGC 326
>UNIPROTKB|F1MBI2 [details] [associations]
symbol:HR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0016604 OMA:LERAPFW
GeneTree:ENSGT00530000063039 EMBL:DAAA02023404 IPI:IPI00687527
Ensembl:ENSBTAT00000015967 Uniprot:F1MBI2
Length = 1186
Score = 137 (53.3 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 41/132 (31%), Positives = 58/132 (43%)
Query: 562 SEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHP-IHDQCFYXXX 620
S G+ V + +W +FR QD ++ +L+ + C + P +C Y
Sbjct: 1042 SPGSQVST---VWHVFRAQDAQRIRRFLQ--------MVCPTGAGNLEPGTPGRC-YLDA 1089
Query: 621 XXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRL 680
+GV WT Q GEAV +PAG PHQV+ L S V F+SPE +L
Sbjct: 1090 GLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQCLVSTVSVTQHFLSPETSALSAQL 1149
Query: 681 TKEFRLLPKNHR 692
+ LP HR
Sbjct: 1150 CHQGPSLPTAHR 1161
Score = 99 (39.9 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 43/157 (27%), Positives = 70/157 (44%)
Query: 301 FQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMS-EVKAIDCLASCE 359
FQ+HW +G+PV+V + + G W SE + +V+A+ L +
Sbjct: 859 FQEHWRQGQPVLVSGIQRTLQGHLW-------------GSEALGALGGQVQALTPLGPPQ 905
Query: 360 -VEISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSD 418
+ + F++G+++ + + L D ED + ++LP EY
Sbjct: 906 PTSLGSATFWEGFSRPESRPKSDEGSVFLLHRALGD--EDTS--RVENLAASLPLPEYC- 960
Query: 419 PRAGILNLAVKLPSG-VLKPDLGPKTYIAYGVAEELG 454
G LNLA LP G VL+P L P+ + AYGV+ G
Sbjct: 961 AHHGKLNLASYLPPGPVLRP-LEPQLWAAYGVSPHRG 996
Score = 90 (36.7 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 126 CNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRA 164
C+HC + + H CP+CS+ LC+ C + GR +A
Sbjct: 593 CSHCHHGLFNTHWRCPRCSHRLCVACGRMAGAGRTREKA 631
Score = 37 (18.1 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 183 PLPESCLH 190
PLPE C H
Sbjct: 955 PLPEYCAH 962
>MGI|MGI:96223 [details] [associations]
symbol:Hr "hairless" species:10090 "Mus musculus" [GO:0000118
"histone deacetylase complex" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IDA] [GO:0042809 "vitamin D
receptor binding" evidence=ISO] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:96223 GO:GO:0003714 GO:GO:0045892
GO:GO:0051291 GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
GO:GO:0043433 GO:GO:0016604 GO:GO:0000118 CTD:55806
eggNOG:NOG243648 HOGENOM:HOG000293150 HOVERGEN:HBG000171
OrthoDB:EOG4DBTCW EMBL:Z32675 EMBL:BC049182 IPI:IPI00123616
PIR:I48378 RefSeq:NP_068677.2 UniGene:Mm.7598
ProteinModelPortal:Q61645 SMR:Q61645 STRING:Q61645
PhosphoSite:Q61645 PRIDE:Q61645 Ensembl:ENSMUST00000022691
Ensembl:ENSMUST00000161069 GeneID:15460 KEGG:mmu:15460
UCSC:uc007uoj.1 GeneTree:ENSGT00530000063039 InParanoid:Q61645
ChiTaRS:HR NextBio:288274 Bgee:Q61645 CleanEx:MM_HR
Genevestigator:Q61645 GermOnline:ENSMUSG00000022096 Uniprot:Q61645
Length = 1182
Score = 143 (55.4 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 37/120 (30%), Positives = 52/120 (43%)
Query: 573 LWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXXXXXXXXXXFGV 632
+W +FR QD ++ +L+ + C + P Y +GV
Sbjct: 1046 VWHVFRAQDAQRIRRFLQ--------MVCPAGAGTLEPGAPGSCYLDAGLRRRLREEWGV 1097
Query: 633 EPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLLPKNHR 692
WT Q GEAV +PAG PHQV+ L S V F+SPE +L + LP +HR
Sbjct: 1098 SCWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLYHQGASLPPDHR 1157
Score = 113 (44.8 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 48/174 (27%), Positives = 78/174 (44%)
Query: 301 FQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCE- 359
FQ+HW +G+PV+V + K LS +W +++ + + +V+ + L +
Sbjct: 855 FQEHWRQGQPVLVSGI-QKTLRLS-----LW-----GMEA-LGTLGGQVQTLTALGPPQP 902
Query: 360 VEISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDP 419
+ + F++G++ T + L DK D S+LP EY
Sbjct: 903 TNLDSTAFWEGFSHPETRPKLDEGSVLLLHRTLGDK--DAS--RVQNLASSLPLPEYC-A 957
Query: 420 RAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHC-DMSDAVNI 472
G LNLA LP G+ L P+ + AYGV RG TK C ++SD ++I
Sbjct: 958 HQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSH--RGHLGTKNLCVEVSDLISI 1009
Score = 67 (28.6 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 126 CNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSG 162
C+ C + + H C CS+ LC+ C GR++G
Sbjct: 595 CSRCHHGLFNTHWRCSHCSHRLCVAC------GRIAG 625
Score = 42 (19.8 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 183 PLPESCLHQ 191
PLPE C HQ
Sbjct: 951 PLPEYCAHQ 959
Score = 37 (18.1 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 214 PPTEMGGC 221
PPT GGC
Sbjct: 317 PPTPPGGC 324
>UNIPROTKB|F1PFJ6 [details] [associations]
symbol:HR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0003714 GO:GO:0045892
GO:GO:0016604 CTD:55806 OMA:LERAPFW GeneTree:ENSGT00530000063039
EMBL:AAEX03014381 RefSeq:XP_543256.3 Ensembl:ENSCAFT00000015345
GeneID:486130 KEGG:cfa:486130 NextBio:20859967 Uniprot:F1PFJ6
Length = 1184
Score = 137 (53.3 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 35/111 (31%), Positives = 50/111 (45%)
Query: 562 SEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXX 621
S G+ V + +W +FR QD ++ +L+ + C + P C Y
Sbjct: 1040 SPGSQVST---VWHVFRAQDAQRIRRFLQ--------MVCPAGAGNLEPGTPGCCYLDAG 1088
Query: 622 XXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 672
+GV WT Q GEAV +PAG PHQV+ L + V F+SPE
Sbjct: 1089 LRRRLREEWGVNCWTLLQAPGEAVLVPAGAPHQVQGLVNTVSVTQHFLSPE 1139
Score = 106 (42.4 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 49/175 (28%), Positives = 80/175 (45%)
Query: 301 FQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCE- 359
FQ+HW +G+PV+V + + G W AL + +V+A+ L +
Sbjct: 857 FQEHWRQGQPVLVSGIQRTLQGSLWGT----EAL--------GALGGQVQALTPLGPPQP 904
Query: 360 VEISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDP 419
+ + F++G+++ + L D ED + ++LP EY
Sbjct: 905 TSLRSATFWEGFSRPEIRPKSDEGSVLLLHRALGD--EDTS--RMENLAASLPLPEYCAL 960
Query: 420 RAGILNLAVKLPSG-VLKPDLGPKTYIAYGVAEELGRGDSVTKLHC-DMSDAVNI 472
R G LNLA LP G L+P L P+ + AYGV+ RG TK C +++D V++
Sbjct: 961 R-GKLNLASYLPPGPALRP-LEPQLWAAYGVSPH--RGHLGTKNLCVEVTDLVSV 1011
Score = 77 (32.2 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 126 CNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSG 162
C+ C + + H CP CS+ LC+ C GR++G
Sbjct: 597 CSRCHRGLFNTHWKCPHCSHRLCVAC------GRMTG 627
>UNIPROTKB|O43593 [details] [associations]
symbol:HR "Protein hairless" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0051291 GO:GO:0046872 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0043433 GO:GO:0016604
GO:GO:0000118 EMBL:AF039196 EMBL:AJ277249 EMBL:AJ277250
EMBL:AJ277251 EMBL:AJ277252 EMBL:AJ277253 EMBL:AJ400825
EMBL:AJ400826 EMBL:AJ400827 EMBL:AJ400828 EMBL:AJ400829
EMBL:AJ400830 EMBL:AJ400831 EMBL:AJ400832 EMBL:AJ400833
EMBL:AJ400834 EMBL:AJ400835 EMBL:AJ400836 EMBL:AJ400837
EMBL:AJ277165 EMBL:BC067128 IPI:IPI00216544 IPI:IPI00292057
RefSeq:NP_005135.2 RefSeq:NP_060881.2 UniGene:Hs.272367
ProteinModelPortal:O43593 SMR:O43593 IntAct:O43593 MINT:MINT-269712
STRING:O43593 PhosphoSite:O43593 PaxDb:O43593 PRIDE:O43593
Ensembl:ENST00000312841 Ensembl:ENST00000381418 GeneID:55806
KEGG:hsa:55806 UCSC:uc003xas.3 UCSC:uc003xat.3 CTD:55806
GeneCards:GC08M022028 HGNC:HGNC:5172 MIM:146550 MIM:203655
MIM:209500 MIM:602302 neXtProt:NX_O43593 Orphanet:701
Orphanet:86819 Orphanet:444 PharmGKB:PA29443 eggNOG:NOG243648
HOGENOM:HOG000293150 HOVERGEN:HBG000171 InParanoid:O43593
OMA:LERAPFW OrthoDB:EOG4DBTCW PhylomeDB:O43593 GenomeRNAi:55806
NextBio:60959 ArrayExpress:O43593 Bgee:O43593 CleanEx:HS_HR
Genevestigator:O43593 GermOnline:ENSG00000168453 Uniprot:O43593
Length = 1189
Score = 133 (51.9 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 35/111 (31%), Positives = 49/111 (44%)
Query: 562 SEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXX 621
S G+ V + +W +FR QD ++ +L+ + C + P Y
Sbjct: 1045 SPGSQVST---VWHVFRAQDAQRIRRFLQ--------MVCPAGAGALEPGAPGSCYLDAG 1093
Query: 622 XXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPE 672
+GV WT Q GEAV +PAG PHQV+ L S V F+SPE
Sbjct: 1094 LRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPE 1144
Score = 106 (42.4 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 55/184 (29%), Positives = 85/184 (46%)
Query: 301 FQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEV 360
FQ+HW +G+PV+V + + G W AL + +V+A+ L +
Sbjct: 862 FQEHWRQGQPVLVSGIQRTLQGNLWGT----EAL--------GALGGQVQALSPLGPPQP 909
Query: 361 E-ISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHC--DEFIS-------A 410
+ + F++G++ WPE+ P SD+ L+ DE S +
Sbjct: 910 SSLGSTTFWEGFS--------WPELR-----PKSDEGSVLLLHRALGDEDTSRVENLAAS 956
Query: 411 LPFQEYSDPRAGILNLAVKLPSGV-LKPDLGPKTYIAYGVAEELGRGDSVTKLHC-DMSD 468
LP EY G LNLA LP G+ L+P L P+ + AYGV+ RG TK C +++D
Sbjct: 957 LPLPEYCALH-GKLNLASYLPPGLALRP-LEPQLWAAYGVSPH--RGHLGTKNLCVEVAD 1012
Query: 469 AVNI 472
V+I
Sbjct: 1013 LVSI 1016
Score = 83 (34.3 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 126 CNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRAEMKFQ 169
C+ C + + H CP+CS+ LC+ C + GR +A + Q
Sbjct: 600 CSRCHHGLFNTHWRCPRCSHRLCVACGRVAGTGRAREKAGFQEQ 643
Score = 44 (20.5 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 212 SCPPTEMGGCGDC 224
S PPT+ GG G C
Sbjct: 329 SYPPTKGGGLGPC 341
Score = 37 (18.1 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 10 PCGKCR 15
PCGKC+
Sbjct: 340 PCGKCQ 345
>UNIPROTKB|F1RMB8 [details] [associations]
symbol:HR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0016604 OMA:LERAPFW
GeneTree:ENSGT00530000063039 EMBL:CT827951
Ensembl:ENSSSCT00000010539 ArrayExpress:F1RMB8 Uniprot:F1RMB8
Length = 1177
Score = 131 (51.2 bits), Expect = 5.3e-12, Sum P(4) = 5.3e-12
Identities = 38/131 (29%), Positives = 56/131 (42%)
Query: 562 SEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYXXXX 621
S G+ V + +W +FR QD ++ +L+ + C + P Y
Sbjct: 1033 SPGSQVST---VWHVFRAQDTQRIRRFLQ--------MVCPAGAGNLEPGTPGSCYLDAR 1081
Query: 622 XXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLT 681
+GV WT Q GEAV +PAG PHQV+ L S + F+SPE +L
Sbjct: 1082 LRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSITQHFLSPETSALSTQLC 1141
Query: 682 KEFRLLPKNHR 692
+ LP + R
Sbjct: 1142 HQGPSLPPDCR 1152
Score = 96 (38.9 bits), Expect = 5.3e-12, Sum P(4) = 5.3e-12
Identities = 43/156 (27%), Positives = 68/156 (43%)
Query: 301 FQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCE- 359
FQ+HW +G+PV+V + + WE AL + +V A+ L +
Sbjct: 850 FQEHWRQGQPVLVSGIQKTLQSHLWET----EAL--------GALGGQVHALTPLGPPQS 897
Query: 360 VEISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDP 419
+ + F++G+++ T + L D ED + ++LP EY
Sbjct: 898 TSLGSTAFWEGFSRPETRPKSDEGSVLLLHRALGD--EDAS--RVENLAASLPLPEYC-A 952
Query: 420 RAGILNLAVKLPSGV-LKPDLGPKTYIAYGVAEELG 454
G LNLA LP G L+P L P+ + AYGV+ G
Sbjct: 953 HHGKLNLASYLPPGPGLRP-LVPQLWAAYGVSPHCG 987
Score = 79 (32.9 bits), Expect = 5.3e-12, Sum P(4) = 5.3e-12
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 126 CNHCATSIIDLHRSCPKCSYELCLTCCKEICEGRLSGRA 164
C+ C + + H CP+CS+ LC+ C + G+ +A
Sbjct: 596 CSRCHHGLFNTHWRCPRCSHRLCVACGRVAGAGKAREKA 634
Score = 37 (18.1 bits), Expect = 5.3e-12, Sum P(4) = 5.3e-12
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 10 PCGKCR 15
PCGKC+
Sbjct: 340 PCGKCQ 345
Score = 37 (18.1 bits), Expect = 3.3e-06, Sum P(4) = 3.3e-06
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 183 PLPESCLH 190
PLPE C H
Sbjct: 946 PLPEYCAH 953
>RGD|708458 [details] [associations]
symbol:Jmjd1c "jumonji domain containing 1C" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 RGD:708458 eggNOG:NOG305537
OrthoDB:EOG447FS9 HOGENOM:HOG000113130 EMBL:AF202265
IPI:IPI01016516 UniGene:Rn.99017 ProteinModelPortal:Q9QXL6
STRING:Q9QXL6 UCSC:RGD:708458 Genevestigator:Q9QXL6 Uniprot:Q9QXL6
Length = 122
Score = 171 (65.3 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 610 PIHDQCFYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFV 669
P+ DQ +Y +GV T Q LG+A+ +PAG HQV+N SC +V DFV
Sbjct: 5 PVRDQGWYVNRRPRQGLLEEYGVRACTLVQFLGDAIVLPAGTLHQVQNFHSCIQVTEDFV 64
Query: 670 SPENVDECLRLTKEFRLLPKNHRAREDKLEV 700
SPE++ + LT+E RLL K +DKL+V
Sbjct: 65 SPEHLVQSFHLTQELRLL-KEEINYDDKLQV 94
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 728 704 0.00082 121 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 630 (67 KB)
Total size of DFA: 440 KB (2208 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 62.63u 0.10s 62.73t Elapsed: 00:00:05
Total cpu time: 62.64u 0.10s 62.74t Elapsed: 00:00:05
Start: Fri May 10 06:13:34 2013 End: Fri May 10 06:13:39 2013