Your job contains 1 sequence.
>004849
MTMDREKEREIELESAMYTNCLLLGLDPSIIGLGASNGTPRVGLFRHSNPKLGEQLLYFI
LSSLRGPTQSAKDFDKVWPIFDSAQSRDFRKVVQGIISELESQGALPRSNSRVSSLATCC
GPRFVELLWQLSLHALREVHRRTFPADIASNPLPASLTDVAFSHAATLLPVTKARIALER
RRFLKNAETAVQRQAMWSGLAHEMTAEFRGLCAEEAYLQQELEKLHELRNKVKLEGELWD
DLVSSSSQNSHLVSKATRLWESILARKNQHEVLASGPIEDLIAHREHRYRISGSSLLAAM
DQSSQVPYADVLSLQPSDWDEKEQSDGSSCSQISDESLSRVDDRGGRVHPTVDVAEIIRR
WTHALQRIHKQSLQLAKANDGDGPDILRSAQDGGTSGHAESLSSTLAEHQQHLASFQVLI
NQLKEVAPSIQKSISDCTDKVNNISSSLPPMAKHHGRATSPNQAQSSGRTLESSSDDVAE
VTSKMSTVQLDKVSVSPPTLKLPQLFSLTPNSSGKGGSLQKRQNSAPQTNQIENLSERNS
LDQPLSNNRVDNAPQDSDSTYVQNLKRSVREAALSVRSCNSESSRDSHSDEGSEHFFVPL
APAGFSRMGLQNKASSVRSKRLFVAQTDTSMLGNNNPDGHLGSKYGDIPDMLNDLDSIHD
FDQVNGFLSAAGSNGVISDTHSSFYDIDEAQDQVFSPPLLMETSLLADSYEDLLAPLSET
ETALMEH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004849
(727 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2168828 - symbol:AUG6 "augmin subunit 6" speci... 1463 1.7e-288 2
POMBASE|SPBC1711.05 - symbol:SPBC1711.05 "nucleocytoplasm... 121 0.00052 1
>TAIR|locus:2168828 [details] [associations]
symbol:AUG6 "augmin subunit 6" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005819 "spindle" evidence=IDA] [GO:0009524
"phragmoplast" evidence=IDA] [GO:0051011 "microtubule minus-end
binding" evidence=IDA] EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005819 GO:GO:0009524 GO:GO:0051011 EMBL:AY039971
EMBL:AY079386 IPI:IPI00547422 RefSeq:NP_568585.1 UniGene:At.7427
PaxDb:Q94BP7 PRIDE:Q94BP7 EnsemblPlants:AT5G40740.1 GeneID:834074
KEGG:ath:AT5G40740 TAIR:At5g40740 eggNOG:NOG306617
HOGENOM:HOG000030585 InParanoid:Q94BP7 OMA:ARKGQHE PhylomeDB:Q94BP7
ProtClustDB:CLSN2689904 ArrayExpress:Q94BP7 Genevestigator:Q94BP7
Uniprot:Q94BP7
Length = 741
Score = 1463 (520.1 bits), Expect = 1.7e-288, Sum P(2) = 1.7e-288
Identities = 289/342 (84%), Positives = 307/342 (89%)
Query: 1 MTMDREKEREIELESAMYTNCLLLGLDPSIIGLGASNGTPRVGLFRHSNPKLGEQLLYFI 60
MTMDREKERE+ELESAMYTNCLLLGLDP++IGLGASNGTPRVGLFRHSNPKLGEQLLYFI
Sbjct: 1 MTMDREKERELELESAMYTNCLLLGLDPNVIGLGASNGTPRVGLFRHSNPKLGEQLLYFI 60
Query: 61 LSSLRGPTQSAKDFDKVWPIFDSAQSRDFRKVVQGIISELESQGALPRSNSRVSSLATCC 120
LSSLRGP QS+KDFDKVWPIFDSAQSRDFRKVVQ IISELESQGALPRSNSRVSSLATCC
Sbjct: 61 LSSLRGPAQSSKDFDKVWPIFDSAQSRDFRKVVQAIISELESQGALPRSNSRVSSLATCC 120
Query: 121 GPRFVELLWQLSLHALREVHRRTFPADIASNPLPASLTDVAFSHAATLLPVTKARIALER 180
GPRFVELLWQLSLHALREVHRRTFPAD+ASNPLP+SLTDV+FSHAATLLPVTKARI LER
Sbjct: 121 GPRFVELLWQLSLHALREVHRRTFPADVASNPLPSSLTDVSFSHAATLLPVTKARIVLER 180
Query: 181 RRFLKNAETAVQRQAMWSGLAHEMTAEFRGLCAEEAYLQQELEKLHELRNKVKLEGELWD 240
RRFLKNAETAVQRQAMWS LAHEMTAEFRGLCAEEAYLQQELEKL++LRNKVK EGE+WD
Sbjct: 181 RRFLKNAETAVQRQAMWSNLAHEMTAEFRGLCAEEAYLQQELEKLNDLRNKVKQEGEVWD 240
Query: 241 DXXXXXXXXXXXXXKATRLWESILARKNQHEVLASGPIEDLIAHREHRYRISGSSLLAAM 300
D KATRLW+SI+ARK QHEVLASGPIEDLIAHREHRYRISGS+LLAAM
Sbjct: 241 DLVSSSSQNSHLVSKATRLWDSIMARKGQHEVLASGPIEDLIAHREHRYRISGSALLAAM 300
Query: 301 DQSSQVPYADVLSLQPSDW----DEKEQSDGSSCSQISDESL 338
DQSSQVP A++LS D D+KE SDGS + + D SL
Sbjct: 301 DQSSQVPRAELLSAHSDDSASLADDKELSDGSY-TNMHDHSL 341
Score = 1332 (473.9 bits), Expect = 1.7e-288, Sum P(2) = 1.7e-288
Identities = 281/472 (59%), Positives = 344/472 (72%)
Query: 261 ESILARKNQHEVLASGPIEDLIAHREHRYRISGSSLLAAMDQSSQVPYADVLSLQPSDWD 320
E ++A + +H SG L+A + ++ + LL+A S AD L +
Sbjct: 279 EDLIAHR-EHRYRISGSA--LLAAMDQSSQVPRAELLSAHSDDS-ASLADDKELSDGSYT 334
Query: 321 EKEQ-----SDGSSCSQISDESLSRVDDRGGRVHPTVDVAEIIRRWTHALQRIHKQSLQL 375
S ++ SQ SDE+LSRVDDRGG+++ TVDVAE+IRRWTHALQRIHKQSL L
Sbjct: 335 NMHDHSLVDSFETASSQASDETLSRVDDRGGKINQTVDVAEVIRRWTHALQRIHKQSLLL 394
Query: 376 AKANDGDGPDILRSAQDGGTSGHAESLSSTLAEHQQHLASFQVLINQLKEVAPSIQKSIS 435
AKANDGDGPDILR+A DGGTSGH ESL++TL EHQQHLASFQVLINQLKEV+P+IQKSIS
Sbjct: 395 AKANDGDGPDILRTASDGGTSGHVESLAATLTEHQQHLASFQVLINQLKEVSPAIQKSIS 454
Query: 436 DCTDKVNNISSSLPPMAKHHGRATSPNQAQSSGRTLESSSDDVAEVTSKMSTVQLDKVSV 495
+CT+ VN++ +LPP+ + +G+A+S Q+Q SGR +E S+DVAE+TS MS VQL+KVS
Sbjct: 455 ECTEMVNSLPPTLPPVTRSNGQASSLLQSQGSGRIMEGVSNDVAELTSTMSNVQLEKVSA 514
Query: 496 SPPTLKLPQLFSLTPNSSGKGGSLQKRQNSAPQTNQIENLSERNSLDQPLSNNRVDNAPQ 555
SP TLKLPQLFS TP SSGKGG+ QKRQ A Q N++E+LSE+NS DQ LSN R DN P
Sbjct: 515 SP-TLKLPQLFSSTPTSSGKGGNGQKRQTMASQVNKMESLSEKNSTDQALSNARPDNLPT 573
Query: 556 DSDSTYVQNLKRSVREAALSVRSCNSESSRDSHSDEGSEHFFVPLAPAGFSRMGLQNKAS 615
D+ S++V NLK+SVREAAL + S ++ SSRDS SDEGSEH+FVPL+ GFSR + KA
Sbjct: 574 DTSSSFVHNLKKSVREAALLIPS-SAGSSRDSQSDEGSEHYFVPLSATGFSRFPSETKAL 632
Query: 616 SVRSKRLFVAQTDTSMLGNNNPDGHLGSKYGDIPDMLNDLDSIHDFDQVNGFLSAAGSNG 675
+R R + ++ S L N PD SKY DIPD +DLDS D+D NGFLS AGSN
Sbjct: 633 PLRGSRALTSLSEPSFLEPNVPDSFAPSKYSDIPDTYDDLDSFKDYDNGNGFLSVAGSNS 692
Query: 676 VISDTHSSFYDIDEAQDQVFSPPLLMETSLLADSYEDLLAPLSETETALMEH 727
V SD SFYDID DQVFSPPLLM++SLL+D+YEDLLAPLSETE ALMEH
Sbjct: 693 VASDAQQSFYDID---DQVFSPPLLMDSSLLSDAYEDLLAPLSETEAALMEH 741
>POMBASE|SPBC1711.05 [details] [associations]
symbol:SPBC1711.05 "nucleocytoplasmic transport
chaperone Srp40 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003674 "molecular_function" evidence=ND] [GO:0005730
"nucleolus" evidence=ISO;IDA] [GO:0006605 "protein targeting"
evidence=NAS] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISM] InterPro:IPR006594 PROSITE:PS50896 SMART:SM00667
PomBase:SPBC1711.05 Pfam:PF05022 GO:GO:0006605 GO:GO:0005730
EMBL:CU329671 GO:GO:0006913 InterPro:IPR013720 Pfam:PF08513
eggNOG:NOG318801 InterPro:IPR007718 OrthoDB:EOG4M68TB
RefSeq:NP_595878.1 ProteinModelPortal:Q9P785 STRING:Q9P785
PRIDE:Q9P785 EnsemblFungi:SPBC1711.05.1 GeneID:2539687
KEGG:spo:SPBC1711.05 OMA:RKHFSRI NextBio:20800841 Uniprot:Q9P785
Length = 451
Score = 121 (47.7 bits), Expect = 0.00052, P = 0.00052
Identities = 77/353 (21%), Positives = 137/353 (38%)
Query: 369 HKQSLQ-LAKANDGDGPDILRSAQ--DGGTSGHAESLSSTLAEHQQHLASFQVLINQLKE 425
HK++ + L K+ND D I + + S S S + ++ +S ++ +
Sbjct: 69 HKKTKESLEKSND-DSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDND 127
Query: 426 VAPSIQKSISDCTDKVNNISSSLPPMAKHHGRATSPNQAQSSGRTLESSSDDVAEVTSKM 485
+ S S S+ + + ++ SSS S + + SS ESSS+D + +S
Sbjct: 128 SSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSED-NDSSSSS 186
Query: 486 STVQLDKVSVSPPTLKLPQLFSLTPNSSGKGGSLQKRQNSAPQTNQIENLSERNSLDQPL 545
S + + S + S + +S + S +S+ +++ E+ SE N
Sbjct: 187 SDSESESSSEDSDSS------SSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSS 240
Query: 546 SNNRVDNAPQDSDSTYVQNLKRSVREAALSVRSCNSESSRDSHSDEGSEHFFVPLAPAGF 605
S++ +++ +DSDS+ + S + S S NS S D S + S+ +
Sbjct: 241 SDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSD 300
Query: 606 SRMGLQNKASSVRSKRLFVAQTDTSMLGNNNPDGHLGSKYGDIPDMLNDLDS--IHDFDQ 663
S + SS S+ + TDT+ G + S + + D DS IHD
Sbjct: 301 STSSSSDSDSSSSSED-GNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSL 359
Query: 664 VNGFLSAAGSNGVISD--THSSFYDIDEAQDQVFSPPLLMETSL-LADSYEDL 713
S S T + F + + F+ P L + S D Y L
Sbjct: 360 KRKHEDDESSTSTKSSRTTKTPFTRVGDPSQWDFASPALRDNSFNFEDDYGTL 412
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.361 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 727 714 0.00084 121 3 11 23 0.45 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 620 (66 KB)
Total size of DFA: 347 KB (2174 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 77.61u 0.23s 77.84t Elapsed: 00:00:04
Total cpu time: 77.61u 0.23s 77.84t Elapsed: 00:00:04
Start: Fri May 10 06:30:16 2013 End: Fri May 10 06:30:20 2013