Your job contains 1 sequence.
>004850
MGTERKRKVSLFDVVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILE
KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIA
CTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDP
LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPL
MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKIT
KEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLT
IDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKS
FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL
DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKA
ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMA
RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDH
KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEAKRVLERLYRKREK
ERENNRK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004850
(727 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 3182 0. 1
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 3149 0. 1
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 2522 4.1e-262 1
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 2481 9.2e-258 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 2480 1.2e-257 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 2480 1.2e-257 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 2480 1.2e-257 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 2480 1.2e-257 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 2480 1.2e-257 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 2480 1.2e-257 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 2469 1.7e-256 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 2387 8.4e-248 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 2387 8.4e-248 1
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 2241 2.5e-232 1
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 2207 9.9e-229 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 2205 1.6e-228 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 2113 9.1e-219 1
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 2083 1.4e-215 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 2069 4.2e-214 1
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 1688 7.4e-176 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 1708 7.5e-176 1
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 1705 1.6e-175 1
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 1696 1.4e-174 1
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 1680 1.7e-174 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 1680 1.7e-174 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 1680 1.7e-174 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 1680 1.7e-174 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 1678 2.8e-174 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 1678 2.8e-174 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 1678 2.8e-174 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 1693 2.9e-174 1
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 1680 6.9e-173 1
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 1679 8.9e-173 1
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 1676 1.8e-172 1
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 1674 3.0e-172 1
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 1666 2.1e-171 1
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 1665 2.7e-171 1
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 1657 1.9e-170 1
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 1656 2.4e-170 1
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 1654 4.0e-170 1
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 1652 6.4e-170 1
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 1652 6.4e-170 1
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 1651 8.2e-170 1
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 1641 9.4e-169 1
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 1639 1.5e-168 1
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 1632 8.5e-168 1
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 1632 8.5e-168 1
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 1627 2.9e-167 1
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 1609 2.3e-165 1
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 1609 2.3e-165 1
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 1605 6.2e-165 1
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 1579 8.3e-164 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 1589 3.1e-163 1
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 1561 2.8e-160 1
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 1561 2.8e-160 1
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 1536 2.3e-159 2
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 1504 3.1e-154 1
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 1500 8.2e-154 1
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 1494 3.6e-153 1
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 1494 3.6e-153 1
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 1491 7.4e-153 1
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 1490 9.5e-153 1
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 1490 9.5e-153 1
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 1489 1.2e-152 1
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 1486 2.5e-152 1
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 1485 3.2e-152 1
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 1483 5.2e-152 1
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 1478 1.8e-151 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 1458 2.3e-149 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 1450 1.6e-148 1
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 1427 4.5e-146 1
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 1423 1.2e-145 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 1421 1.9e-145 1
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 1420 2.5e-145 1
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 1418 4.0e-145 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 1417 5.1e-145 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 1393 1.8e-142 1
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 1388 6.1e-142 1
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 834 2.7e-141 3
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 834 2.7e-141 3
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 1372 3.0e-140 1
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 1371 3.9e-140 1
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 1355 1.9e-138 1
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 1273 2.4e-138 2
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 1272 3.1e-138 2
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 1349 8.3e-138 1
DICTYBASE|DDB_G0269306 - symbol:dhx35 "DEAD/DEAH box heli... 999 3.5e-137 2
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 1342 4.6e-137 1
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 1339 9.5e-137 1
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 1333 4.1e-136 1
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 1321 7.7e-135 1
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 967 1.6e-134 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 1315 3.3e-134 1
UNIPROTKB|A7MBI4 - symbol:DHX32 "DHX32 protein" species:9... 1313 5.4e-134 1
UNIPROTKB|F1PER1 - symbol:DHX32 "Uncharacterized protein"... 1301 1.0e-132 1
MGI|MGI:2141813 - symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) bo... 1299 1.6e-132 1
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 1295 4.4e-132 1
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 1294 5.6e-132 1
UNIPROTKB|Q7L7V1 - symbol:DHX32 "Putative pre-mRNA-splici... 1293 7.1e-132 1
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 1288 2.4e-131 1
WARNING: Descriptions of 215 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 3182 (1125.2 bits), Expect = 0., P = 0.
Identities = 601/707 (85%), Positives = 645/707 (91%)
Query: 1 MGTERKRKVSLFDVVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILE 60
MGTERKRK+SLFDV+D+ S AK KT+G+ G + NSLIN+WNGKPYSQRYY+ILE
Sbjct: 1 MGTERKRKISLFDVMDDPSAPAKNAKTSGLPDGGI----NSLINKWNGKPYSQRYYDILE 56
Query: 61 KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIA 120
KR++LPVW QKEEFL+ L NQ +ILVGETGSGKTTQIPQFV++ VD ET D+RRK ++
Sbjct: 57 KRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLVG 116
Query: 121 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDP 180
CTQP EEMDVTIGEEVGYSIRFEDCSS RTVLKYLTDGMLLREAM DP
Sbjct: 117 CTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADP 176
Query: 181 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPL 240
LLERYKVI+LDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQ YF GAPL
Sbjct: 177 LLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPL 236
Query: 241 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKIT 300
MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP GDILVFLTGEEEIEDACRKI
Sbjct: 237 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKIN 296
Query: 301 KEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLT 360
KE+ N+GDQVGP+KVVPLYSTLPPAMQQKIF+ RKIVVSTNIAETSLT
Sbjct: 297 KEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLT 356
Query: 361 IDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKS 420
IDGIVYVIDPGFAKQKVYNPR+RVESLLVSPISKASAHQRSGRAGRT+PGKCFRLYTEKS
Sbjct: 357 IDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKS 416
Query: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 480
FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL
Sbjct: 417 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 476
Query: 481 DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKA 540
DDDGNLT+ GE MSEFPLDPQM+KML+ SP++NCSNEILS+SAMLSVPNCF+RPREAQKA
Sbjct: 477 DDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREAQKA 536
Query: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMA 600
ADEAKARFGHI+GDHLTLLNVYHA+KQNNEDP+WCY+NF+N+RA+KSADNVRQQLVRIM+
Sbjct: 537 ADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVRIMS 596
Query: 601 RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDH 660
RFNLK+CS DFNSRDYY+NIRKAMLAGYFMQVAHLERTG YLTVKDNQVVHLHPSNCLDH
Sbjct: 597 RFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDH 656
Query: 661 KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEA 707
KPEWVIYNEYVLTSRNFIRTVTD+RGEWL+D+A HYYDLSNFP CEA
Sbjct: 657 KPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEA 703
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 3149 (1113.6 bits), Expect = 0., P = 0.
Identities = 593/707 (83%), Positives = 644/707 (91%)
Query: 1 MGTERKRKVSLFDVVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILE 60
MGTERKRKVSLFDV+++ S+S+K K+NG+G A ++LIN+WNGK YSQRY+EILE
Sbjct: 1 MGTERKRKVSLFDVMEDPSLSSKNTKSNGLGLAAAAGGGSNLINKWNGKAYSQRYFEILE 60
Query: 61 KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIA 120
KR+ LPVW QK++FL L +NQ +ILVGETGSGKTTQIPQFVL+ V + D+ RK ++
Sbjct: 61 KRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVG 120
Query: 121 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDP 180
CTQP +EMDV+IGEEVGYSIRFEDC+S+RT+LKYLTDGMLLREAM DP
Sbjct: 121 CTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADP 180
Query: 181 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPL 240
LLERYKVI+LDEAHERTLATDVLFGLLKEVL+NRPDLKLVVMSATLEAEKFQ YF GAPL
Sbjct: 181 LLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPL 240
Query: 241 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKIT 300
MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP GDILVFLTGEEEIEDACRKI
Sbjct: 241 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKIN 300
Query: 301 KEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLT 360
KE++N+GDQVGPVKVVPLYSTLPPAMQQKIF+ RKIVVSTNIAETSLT
Sbjct: 301 KEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLT 360
Query: 361 IDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKS 420
IDGIVYVIDPGFAKQKVYNPR+RVESLLVSPISKASAHQRSGRAGRT+PGKCFRLYTEKS
Sbjct: 361 IDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKS 420
Query: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 480
FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL
Sbjct: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 480
Query: 481 DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKA 540
DD+GNLT+ GE MSEFPLDPQMSKML+ SP++NCSNEILS+SAMLSVPNCFVRPREAQKA
Sbjct: 481 DDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKA 540
Query: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMA 600
ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP+WC++NFVN+RA+KSADNVRQQLVRIM+
Sbjct: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMS 600
Query: 601 RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDH 660
RFNLK+CS DFNSRDYYVNIRKAMLAGYFMQVAHLERTG YLTVKDNQVVHLHPSNCLDH
Sbjct: 601 RFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDH 660
Query: 661 KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEA 707
KPEWVIYNEYVLT+RNFIRTVTD+RGEWL+D+A HYYDLSNFP CEA
Sbjct: 661 KPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEA 707
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 2522 (892.8 bits), Expect = 4.1e-262, P = 4.1e-262
Identities = 476/676 (70%), Positives = 564/676 (83%)
Query: 33 GAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGS 92
G + N +N PYSQRY + +KR +LPV++ + +F+++L +Q I+LVGETGS
Sbjct: 40 GFVPNKQPPTMNPLTNTPYSQRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGS 99
Query: 93 GKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSI 152
GKTTQIPQ+ VD R+ ++CTQP EEMDV +GEEVGYSI
Sbjct: 100 GKTTQIPQWC---VDFAVSKGRKG--VSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSI 154
Query: 153 RFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK 212
RFEDCS+A+T+LKY+TDGMLLREAM+DP+L++Y+VI+LDEAHERTLATD+L G+LKEV++
Sbjct: 155 RFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIR 214
Query: 213 NRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQ 272
R DLKLVVMSATL+A KFQ YF APLMKVPGR HPVEIFYT EPERDYLEAAIRTV+Q
Sbjct: 215 QRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQ 274
Query: 273 IHMCEP-SGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIF 331
IHMCE GDIL+FLTG+EEIE+AC++I +EI N+G ++G +K +PLYSTLPP +QQ+IF
Sbjct: 275 IHMCEEIEGDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIF 334
Query: 332 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 391
E RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLVSP
Sbjct: 335 EPAPPPNANGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSP 393
Query: 392 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 451
ISKASA QRSGRAGRT+PGKCFRLYTEK+F N++Q TYPEILRSNL VL LKKLGID
Sbjct: 394 ISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGID 453
Query: 452 DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPK 511
DLVHFDFMDPPAPETLMRALE+LNYL ALDDDGNLT++G MSEFPLDPQ++KML+ S +
Sbjct: 454 DLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQ 513
Query: 512 YNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNED 571
+NCSNEILSI+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQ++ED
Sbjct: 514 HNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSED 573
Query: 572 PSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQ 631
P+WCY+NF+N R+LKSADNVRQQL RIM RFNL+ S +F S+DYYVNIRKA++ G+FMQ
Sbjct: 574 PNWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQ 633
Query: 632 VAHLERTGQYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLID 691
VAHLERTG YLT+KDNQ V LHPS CLDHKP+WVIYNE+VLT++N+IRTVTDV+ EWL
Sbjct: 634 VAHLERTGYYLTIKDNQNVQLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCC 693
Query: 692 IAPHYYDLSNFPQCEA 707
+AP YYDL+NFPQCEA
Sbjct: 694 LAPQYYDLNNFPQCEA 709
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 2481 (878.4 bits), Expect = 9.2e-258, P = 9.2e-258
Identities = 473/705 (67%), Positives = 570/705 (80%)
Query: 4 ERKRKVSLFDVVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRK 63
ER+++ L + T ++A L P AM+ ++ IN + P++ RYY+IL+KR
Sbjct: 50 EREKEKELRAASNSTLIAAGLPPMK---P-AMIPHS---INPFTNLPHTPRYYDILKKRL 102
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
LPVW+ KE F +L +Q +LVGETGSGKTTQIPQ+ ++ + P +R +ACTQ
Sbjct: 103 QLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMR-SLPGPKRG--VACTQ 159
Query: 124 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
P +EMDV +G+EVGYSIRFEDCSSA+T+LKY+TDGMLLREAM DPLLE
Sbjct: 160 PRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLE 219
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKV 243
RY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VMSATL+A KFQ YF PL+ +
Sbjct: 220 RYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTI 279
Query: 244 PGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GDILVFLTGEEEIEDACRKITKE 302
PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD+L+FLTG+EEI++AC++I +E
Sbjct: 280 PGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKRE 339
Query: 303 ITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTID 362
I ++G +VG +K++PLYSTLPP QQ+IFE RK+VVSTNIAETSLTID
Sbjct: 340 IDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIG-RKVVVSTNIAETSLTID 398
Query: 363 GIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFN 422
G+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+GRAGRT+PGKCFRLYTEK++
Sbjct: 399 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 458
Query: 423 NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDD 482
++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDPPAPETLMRALE+LNYL AL+D
Sbjct: 459 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 518
Query: 483 DGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAAD 542
DG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI+AMLSVP CFVRP EA+KAAD
Sbjct: 519 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAAD 578
Query: 543 EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARF 602
EAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N+R+L SADNVRQQL RIM RF
Sbjct: 579 EAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRF 638
Query: 603 NLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHKP 662
NL S DF SRDYY+NIRKA++ GYFMQVAHLERTG YLTVKDNQVV LHPS LDHKP
Sbjct: 639 NLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKP 698
Query: 663 EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEA 707
EWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SNFPQCEA
Sbjct: 699 EWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEA 743
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 2480 (878.1 bits), Expect = 1.2e-257, P = 1.2e-257
Identities = 463/666 (69%), Positives = 552/666 (82%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + P++ RYY+IL+KR LPVW+ K+ F +L +Q +LVGETGSGKTTQIPQ+
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
+E + P +R +ACTQP +EMDV +G+EVGYSIRFEDCSSA+T
Sbjct: 175 VEYMR-SLPGPKRG--VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKT 231
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VM
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVM 291
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GD 281
SATL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD
Sbjct: 292 SATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGD 351
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
+L+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 352 LLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNG 411
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+
Sbjct: 412 AIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDP
Sbjct: 471 GRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDP 530
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI
Sbjct: 531 PAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSI 590
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVN 581
+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N
Sbjct: 591 TAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFIN 650
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 641
+R+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG Y
Sbjct: 651 YRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHY 710
Query: 642 LTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
LTVKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SN
Sbjct: 711 LTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Query: 702 FPQCEA 707
FPQCEA
Sbjct: 771 FPQCEA 776
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 2480 (878.1 bits), Expect = 1.2e-257, P = 1.2e-257
Identities = 463/666 (69%), Positives = 552/666 (82%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + P++ RYY+IL+KR LPVW+ K+ F +L +Q +LVGETGSGKTTQIPQ+
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
+E + P +R +ACTQP +EMDV +G+EVGYSIRFEDCSSA+T
Sbjct: 175 VEYMR-SLPGPKRG--VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKT 231
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VM
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVM 291
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GD 281
SATL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD
Sbjct: 292 SATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGD 351
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
+L+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 352 LLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNG 411
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+
Sbjct: 412 AIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDP
Sbjct: 471 GRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDP 530
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI
Sbjct: 531 PAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSI 590
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVN 581
+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N
Sbjct: 591 TAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFIN 650
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 641
+R+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG Y
Sbjct: 651 YRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHY 710
Query: 642 LTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
LTVKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SN
Sbjct: 711 LTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Query: 702 FPQCEA 707
FPQCEA
Sbjct: 771 FPQCEA 776
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 2480 (878.1 bits), Expect = 1.2e-257, P = 1.2e-257
Identities = 463/666 (69%), Positives = 552/666 (82%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + P++ RYY+IL+KR LPVW+ K+ F +L +Q +LVGETGSGKTTQIPQ+
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
+E + P +R +ACTQP +EMDV +G+EVGYSIRFEDCSSA+T
Sbjct: 175 VEYMR-SLPGPKRG--VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKT 231
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VM
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVM 291
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GD 281
SATL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD
Sbjct: 292 SATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGD 351
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
+L+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 352 LLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNG 411
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+
Sbjct: 412 AIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDP
Sbjct: 471 GRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDP 530
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI
Sbjct: 531 PAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSI 590
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVN 581
+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N
Sbjct: 591 TAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFIN 650
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 641
+R+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG Y
Sbjct: 651 YRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHY 710
Query: 642 LTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
LTVKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SN
Sbjct: 711 LTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Query: 702 FPQCEA 707
FPQCEA
Sbjct: 771 FPQCEA 776
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 2480 (878.1 bits), Expect = 1.2e-257, P = 1.2e-257
Identities = 463/666 (69%), Positives = 552/666 (82%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + P++ RYY+IL+KR LPVW+ K+ F +L +Q +LVGETGSGKTTQIPQ+
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
+E + P +R +ACTQP +EMDV +G+EVGYSIRFEDCSSA+T
Sbjct: 175 VEYMR-SLPGPKRG--VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKT 231
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VM
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVM 291
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GD 281
SATL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD
Sbjct: 292 SATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGD 351
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
+L+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 352 LLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNG 411
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+
Sbjct: 412 AIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDP
Sbjct: 471 GRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDP 530
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI
Sbjct: 531 PAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSI 590
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVN 581
+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N
Sbjct: 591 TAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFIN 650
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 641
+R+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG Y
Sbjct: 651 YRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHY 710
Query: 642 LTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
LTVKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SN
Sbjct: 711 LTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Query: 702 FPQCEA 707
FPQCEA
Sbjct: 771 FPQCEA 776
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 2480 (878.1 bits), Expect = 1.2e-257, P = 1.2e-257
Identities = 463/666 (69%), Positives = 552/666 (82%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + P++ RYY+IL+KR LPVW+ K+ F +L +Q +LVGETGSGKTTQIPQ+
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
+E + P +R +ACTQP +EMDV +G+EVGYSIRFEDCSSA+T
Sbjct: 175 VEYMR-SLPGPKRG--VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKT 231
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VM
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVM 291
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GD 281
SATL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD
Sbjct: 292 SATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGD 351
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
+L+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 352 LLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNG 411
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+
Sbjct: 412 AIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDP
Sbjct: 471 GRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDP 530
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI
Sbjct: 531 PAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSI 590
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVN 581
+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N
Sbjct: 591 TAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFIN 650
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 641
+R+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG Y
Sbjct: 651 YRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHY 710
Query: 642 LTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
LTVKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SN
Sbjct: 711 LTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Query: 702 FPQCEA 707
FPQCEA
Sbjct: 771 FPQCEA 776
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 2480 (878.1 bits), Expect = 1.2e-257, P = 1.2e-257
Identities = 463/666 (69%), Positives = 552/666 (82%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + P++ RYY+IL+KR LPVW+ K+ F +L +Q +LVGETGSGKTTQIPQ+
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
+E + P +R +ACTQP +EMDV +G+EVGYSIRFEDCSSA+T
Sbjct: 175 VEYMR-SLPGPKRG--VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKT 231
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VM
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVM 291
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GD 281
SATL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD
Sbjct: 292 SATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGD 351
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
+L+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFE
Sbjct: 352 LLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNG 411
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+
Sbjct: 412 AIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDP
Sbjct: 471 GRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDP 530
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI
Sbjct: 531 PAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSI 590
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVN 581
+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N
Sbjct: 591 TAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFIN 650
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 641
+R+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG Y
Sbjct: 651 YRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHY 710
Query: 642 LTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
LTVKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SN
Sbjct: 711 LTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Query: 702 FPQCEA 707
FPQCEA
Sbjct: 771 FPQCEA 776
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 2469 (874.2 bits), Expect = 1.7e-256, P = 1.7e-256
Identities = 468/696 (67%), Positives = 563/696 (80%)
Query: 16 DETSVSAKL---VKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKE 72
D S SA L V +G+ P + + IN + P++ RYYEIL+KR LPVW+ KE
Sbjct: 60 DSKSSSAALSSSVSGSGILPLKQASMHQQ-INPFTNLPHTPRYYEILKKRLQLPVWEYKE 118
Query: 73 EFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXX 132
F +L +Q +LVGETGSGKTTQIPQ+ ++ V P +R +ACTQP
Sbjct: 119 RFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVR-SLPGPKRG--VACTQPRRVAAMSV 175
Query: 133 XXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDE 192
+EMDV +G+EVGYSIRFEDCSSA+T+LKY+TDGMLLREAM DPLLERY VI+LDE
Sbjct: 176 AQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDE 235
Query: 193 AHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEI 252
AHERTLATD+L G+LKEV++ R DLK++VMSATL+A KFQ YF PL+ +PGR HPVEI
Sbjct: 236 AHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEI 295
Query: 253 FYTQEPERDYLEAAIRTVVQIHMCEPS-GDILVFLTGEEEIEDACRKITKEITNMGDQVG 311
FYT EPERDYLEAAIRTV+QIHMCE GD+L+FLTG+EEI++AC++I +EI ++G VG
Sbjct: 296 FYTPEPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVG 355
Query: 312 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 371
+K++PLYSTLPP QQ+IFE RK+VVSTNIAETSLTIDG+V+VIDPG
Sbjct: 356 DIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPG 414
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
FAKQKVYNPR+RVESLLV+ ISKASA QR+GRAGRT+PGKCFRLYTEK++ ++Q TYP
Sbjct: 415 FAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYP 474
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
EILRSNL + VL LKKLGIDDLVHFDFMDPPAPETLMRALE+LNYL AL+DDG+LTE+G
Sbjct: 475 EILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGS 534
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI 551
M+EFPLDPQ++KM++ S +NCSNE+LSI+AMLSVP CFVRP EA+KAADE+K RF HI
Sbjct: 535 MMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVPQCFVRPTEAKKAADESKMRFAHI 594
Query: 552 DGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDF 611
DGDHLTLLNVYHA+KQN+E WCYDNF+N+R+L SADNVRQQL RIM RFNL S +F
Sbjct: 595 DGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEF 654
Query: 612 NSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYV 671
SRDYY+NIR+A++ G+FMQVAHLERTG YLTVKDNQVV LHPS LDHKPEWV+YNE+V
Sbjct: 655 TSRDYYINIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFV 714
Query: 672 LTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEA 707
LT++N+IRT TD++ EWL+ IAP YY++SNFPQCEA
Sbjct: 715 LTTKNYIRTCTDIKPEWLVKIAPQYYEMSNFPQCEA 750
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 2387 (845.3 bits), Expect = 8.4e-248, P = 8.4e-248
Identities = 447/674 (66%), Positives = 544/674 (80%)
Query: 33 GAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGS 92
GA+ N IN +N +P+S RY+ I EKR LPVW+ KE+F+++L+ NQ I LVGETGS
Sbjct: 45 GAV-GNMKIQINPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGS 103
Query: 93 GKTTQIPQFVLEGVDIETPDRR--RKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGY 150
GKTTQIPQ+ +E + + + + ++ACTQP EEMDV +G+EVGY
Sbjct: 104 GKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGY 163
Query: 151 SIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV 210
SIRFEDC S RTVLKY TDGMLLREAM PLL++YKV++LDEAHERTLATD+L GL+KE+
Sbjct: 164 SIRFEDCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEI 223
Query: 211 LKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTV 270
++NR D+K+V+MSATL+A KFQ YF PL+ VPGR PVEIF+T E+DYLEAAIRTV
Sbjct: 224 VRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTV 283
Query: 271 VQIHMCEP-SGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQK 329
+QIHM E GDIL+FLTG+EEIE+AC++I +EI +G G + +PLYSTLPPA QQ+
Sbjct: 284 IQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQR 343
Query: 330 IFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLV 389
IFE RK V+STNIAETSLTIDG+V+VIDPGF+KQKVYNPR+RVESLLV
Sbjct: 344 IFEPAPPNRPNGAIS-RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLV 402
Query: 390 SPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLG 449
PISKASA QR+GRAGRT+PGKCFRLYTE ++ +++Q QTYPEILRSNL + VL LKKLG
Sbjct: 403 CPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLG 462
Query: 450 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVES 509
+DLVHFDFMDPPAPETLMRALE+LNYL A++DDG LTE+G M+EFPLDPQ++KML+ S
Sbjct: 463 TEDLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITS 522
Query: 510 PKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN 569
+ NCSNEILSI+AMLSVP C+VRP E + ADEAKARF HIDGDHLTLLNVYH++KQN
Sbjct: 523 TELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQ 582
Query: 570 EDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYF 629
EDP WCYDNF+N+R +K+AD VR QL R+M ++NL+ S DF SRDYY+NIRKA++AG+F
Sbjct: 583 EDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFF 642
Query: 630 MQVAHLERTGQYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWL 689
MQVAHLER+G Y+TVKDNQ+V+LHPS LDHKPEW +YNE+VLT++NFIRTVTDVR EWL
Sbjct: 643 MQVAHLERSGHYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWL 702
Query: 690 IDIAPHYYDLSNFP 703
+ IAP YYDL NFP
Sbjct: 703 LQIAPQYYDLDNFP 716
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 2387 (845.3 bits), Expect = 8.4e-248, P = 8.4e-248
Identities = 447/674 (66%), Positives = 544/674 (80%)
Query: 33 GAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGS 92
GA+ N IN +N +P+S RY+ I EKR LPVW+ KE+F+++L+ NQ I LVGETGS
Sbjct: 45 GAV-GNMKIQINPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGS 103
Query: 93 GKTTQIPQFVLEGVDIETPDRR--RKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGY 150
GKTTQIPQ+ +E + + + + ++ACTQP EEMDV +G+EVGY
Sbjct: 104 GKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGY 163
Query: 151 SIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV 210
SIRFEDC S RTVLKY TDGMLLREAM PLL++YKV++LDEAHERTLATD+L GL+KE+
Sbjct: 164 SIRFEDCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEI 223
Query: 211 LKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTV 270
++NR D+K+V+MSATL+A KFQ YF PL+ VPGR PVEIF+T E+DYLEAAIRTV
Sbjct: 224 VRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTV 283
Query: 271 VQIHMCEP-SGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQK 329
+QIHM E GDIL+FLTG+EEIE+AC++I +EI +G G + +PLYSTLPPA QQ+
Sbjct: 284 IQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQR 343
Query: 330 IFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLV 389
IFE RK V+STNIAETSLTIDG+V+VIDPGF+KQKVYNPR+RVESLLV
Sbjct: 344 IFEPAPPNRPNGAIS-RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLV 402
Query: 390 SPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLG 449
PISKASA QR+GRAGRT+PGKCFRLYTE ++ +++Q QTYPEILRSNL + VL LKKLG
Sbjct: 403 CPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLG 462
Query: 450 IDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVES 509
+DLVHFDFMDPPAPETLMRALE+LNYL A++DDG LTE+G M+EFPLDPQ++KML+ S
Sbjct: 463 TEDLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITS 522
Query: 510 PKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN 569
+ NCSNEILSI+AMLSVP C+VRP E + ADEAKARF HIDGDHLTLLNVYH++KQN
Sbjct: 523 TELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQ 582
Query: 570 EDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYF 629
EDP WCYDNF+N+R +K+AD VR QL R+M ++NL+ S DF SRDYY+NIRKA++AG+F
Sbjct: 583 EDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFF 642
Query: 630 MQVAHLERTGQYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWL 689
MQVAHLER+G Y+TVKDNQ+V+LHPS LDHKPEW +YNE+VLT++NFIRTVTDVR EWL
Sbjct: 643 MQVAHLERSGHYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWL 702
Query: 690 IDIAPHYYDLSNFP 703
+ IAP YYDL NFP
Sbjct: 703 LQIAPQYYDLDNFP 716
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 2241 (793.9 bits), Expect = 2.5e-232, P = 2.5e-232
Identities = 429/662 (64%), Positives = 526/662 (79%)
Query: 44 NRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVL 103
N +N KP+SQ Y++ILE R+ LPV+QQ+EEFL++ NQ+I+ VGETGSGKTTQIPQFVL
Sbjct: 54 NFFNDKPFSQNYFKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVL 113
Query: 104 EGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTV 163
D E P IACTQP +EMDV +GEEVGY+IRFEDCS T+
Sbjct: 114 --YD-ELP-HLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTL 169
Query: 164 LKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMS 223
LKY+TDGMLLREAMTD +L RY I+LDEAHERTLATD+L GL+K + RPDLK++VMS
Sbjct: 170 LKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMS 229
Query: 224 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDIL 283
ATL+A+KFQ YF+ APL+ VPGR +PVEI+YTQEPERDYLEAA+RTV+QIH+ E GDIL
Sbjct: 230 ATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDIL 289
Query: 284 VFLTGEEEIEDACRKITKEITNMGDQ--VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
VFLTGEEEIEDACRKIT E ++ + GP+KV PLY +LPP QQ+IFE
Sbjct: 290 VFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSG 349
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK+V+STNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPISKASA QR+
Sbjct: 350 YG--RKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRA 407
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTE++F +L QTYPEILRSNL++TVL LKKLGIDDLVHFD+MDP
Sbjct: 408 GRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDP 467
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPET+MRALE LNYL LDD+G+LT +G K SEFPLDP ++ ML+ SP++ CSNE+LS+
Sbjct: 468 PAPETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSL 527
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVN 581
+A+LSVPN FVRP A+K ADE + +F H DGDHLTLLNVYHAYK WC+++F++
Sbjct: 528 TALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLS 587
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ- 640
HRAL SADNVR+QL R M R ++L S F+ ++YYVNIR+A+++G+FMQVA G+
Sbjct: 588 HRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKN 647
Query: 641 YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 700
Y+T+KDNQVV LHPS L PEWV+YNE+VLT+++FIR VT +R EWLI++AP+YYDL
Sbjct: 648 YVTMKDNQVVSLHPSCGLSVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLD 707
Query: 701 NF 702
+F
Sbjct: 708 DF 709
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 2207 (782.0 bits), Expect = 9.9e-229, P = 9.9e-229
Identities = 435/696 (62%), Positives = 531/696 (76%)
Query: 16 DETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFL 75
++ S AKL + A +N N + +PYS +Y+ IL+ R+ LPV Q++EFL
Sbjct: 51 NKNSAFAKLQRHKTTAAQAQKVEDNEF-NPFTNRPYSSKYFSILKTRRDLPVHAQRDEFL 109
Query: 76 QVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXX 135
Q+ + +Q+++ VGETGSGKTTQIPQFVL +D + P +RKM IACTQP
Sbjct: 110 QLYQQSQILVFVGETGSGKTTQIPQFVL--LD-DLPQTQRKM-IACTQPRRVAAMSVAQR 165
Query: 136 XXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHE 195
E+DVT+GEEVGYSIRFED +S +T+LKY+TDGMLLREAM D L RY I+LDEAHE
Sbjct: 166 VAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMNDHELSRYSTIILDEAHE 225
Query: 196 RTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYT 255
RT++TDVL GLLKEV++ RPDLK+++MSATL+A+KFQ YF APL+ VPGR HPVEIFYT
Sbjct: 226 RTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYT 285
Query: 256 QEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQV--GPV 313
EPE+DY+EAAIRTV+QIH E GDIL+FLTGEEEIEDA RKI+ E M + GP+
Sbjct: 286 PEPEQDYVEAAIRTVLQIHATEDEGDILLFLTGEEEIEDAARKISLEGDEMIREADAGPL 345
Query: 314 KVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFA 373
KV LY +LPP MQQ+IFE RK++VSTNIAETSLTIDGIVYV+DPGF+
Sbjct: 346 KVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFS 405
Query: 374 KQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEI 433
KQK+YNPR+RVESLLVSPISKASA QR+GRAGRT+PGKCFRLYTE +F +L QTYPEI
Sbjct: 406 KQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESAFKKELIDQTYPEI 465
Query: 434 LRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKM 493
LRSNL++TVL LKKLGIDDLVHFD MDPPAPETLMRALE LNYL LDDDGNLT +G
Sbjct: 466 LRSNLSSTVLELKKLGIDDLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLA 525
Query: 494 SEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG 553
SEFPLDP ++ ML+ SP++ CSNEILSI+A+LSVP FVRP +K ADE K F H DG
Sbjct: 526 SEFPLDPALAVMLISSPEFYCSNEILSITALLSVPQIFVRPASQRKRADEMKNLFAHPDG 585
Query: 554 DHLTLLNVYHAYK--QNNEDPS-WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSND 610
DHLTLLN YHA+K + E+P WC+D+F++ R+L+SADNVR QL+RIM R L++ S
Sbjct: 586 DHLTLLNAYHAFKSPEAQENPKQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTS 645
Query: 611 FNSRDYYVNIRKAMLAGYFMQVAHLERTGQ--YLTVKDNQVVHLHPSNCLDHKPEWVIYN 668
F + YY NIR+A+ AG+FMQVA E G+ Y+T+KD+Q V LHPS L H EWV+YN
Sbjct: 646 FEDKKYYENIRRALCAGFFMQVAKKENQGKSMYMTIKDHQNVLLHPSTVLAHDAEWVLYN 705
Query: 669 EYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQ 704
E+VLT++N+IRTVT V+ EWLIDIAP YYD+S FP+
Sbjct: 706 EFVLTTKNYIRTVTAVKPEWLIDIAPTYYDISTFPK 741
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 2205 (781.3 bits), Expect = 1.6e-228, P = 1.6e-228
Identities = 428/672 (63%), Positives = 525/672 (78%)
Query: 37 NN--NNSLINRWNGKP--YSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGS 92
NN +N I++W K +S+RYYEILEKRK LPVW+QKE+F++V+K NQV+ILVGETGS
Sbjct: 45 NNIKSNLTIDQWIPKKETFSKRYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGS 104
Query: 93 GKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSI 152
GKTTQIPQFV++ I P + M+ TQP EEMD +GEEVGYSI
Sbjct: 105 GKTTQIPQFVVDAGLIR-PGK----MVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSI 159
Query: 153 RFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK 212
RFE+ SSART +KYLTDGMLLRE+M+DP L +Y VI+LDEAHERTL+TD+LFGL+K++LK
Sbjct: 160 RFEELSSARTFMKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILK 219
Query: 213 NRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQ 272
R DLKL+VMSATLEA KFQ YF APL+KVPGRLHPVEIFYT+E +DYLE+A+RTV+
Sbjct: 220 RRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVID 279
Query: 273 IHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFE 332
IH E +GDILVFLTGEEEIED C KI +E G + P+K +PLYS+LP Q KIF+
Sbjct: 280 IHTNEGTGDILVFLTGEEEIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFD 337
Query: 333 XXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPI 392
RK +VSTNIAETSLTIDGIV+V+DPGF+KQK YNPR RVESLLV+PI
Sbjct: 338 TCKE---------RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPI 388
Query: 393 SKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDD 452
SKASA+QR+GRAGRT+PGKCFRLYTEK+F + QT+PEILRSNLA+ VL L KLG+ D
Sbjct: 389 SKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVD 448
Query: 453 LVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKY 512
LVHFDFMDPP P+TL+RALEVL+YLGALDD+G LTE+G MSEFPLDPQ+SKML+ S +
Sbjct: 449 LVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAER 508
Query: 513 NCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP 572
+CSNEIL+I+AMLS PNCF+RP++ + AD AK F H DGDHLT+LNVYH++K+N EDP
Sbjct: 509 SCSNEILTIAAMLSAPNCFMRPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDP 568
Query: 573 SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQV 632
+WCYDNF+NHRA+K AD+VR QL RI+ RF L L S D NS+ YY NI+K + AG+FMQV
Sbjct: 569 TWCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQV 628
Query: 633 AHLERTGQYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
A E+ Y T+ D Q V HPS L +PE+ IYNE+VLTS N+IRT+TDV+ +WL+++
Sbjct: 629 AKCEKKNIYFTLGDEQSVIFHPSTGLTRRPEFCIYNEFVLTSENYIRTITDVKFDWLLEL 688
Query: 693 APHYYDLSNFPQ 704
AP Y+ +FP+
Sbjct: 689 APSYFKQKSFPK 700
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 2113 (748.9 bits), Expect = 9.1e-219, P = 9.1e-219
Identities = 418/672 (62%), Positives = 519/672 (77%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + G+ ++ +Y +IL+ R+ LPV Q++EFL++ + NQ+++ VGETGSGKTTQIPQFV
Sbjct: 71 INPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFV 130
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
L D E P +ACTQP EEMDV +GEEVGYSIRFE+ +S +T
Sbjct: 131 L--FD-EMP-HLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKT 186
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM D L RY I+LDEAHERTLATD+L GLLK+V+K RPDLK+++M
Sbjct: 187 ILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIM 246
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
SATL+AEKFQ YF APL+ VPGR +PVE++YT E +RDYL++AIRTV+QIH E +GDI
Sbjct: 247 SATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDI 306
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQV------GPVKVVPLYSTLPPAMQQKIFEXXXX 336
L+FLTGE+EIEDA RKI+ E GDQ+ GP+ V PLY +LPP QQ+IFE
Sbjct: 307 LLFLTGEDEIEDAVRKISLE----GDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPE 362
Query: 337 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
RK+V+STNIAETSLTIDGIVYV+DPGF+KQKVYNPR+RVESLLVSPISKAS
Sbjct: 363 SHNGRPG--RKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 420
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QR+GRAGRT+PGKCFRLYTE++F +L Q+YPEILRSNL++TVL LKKLGIDDLVHF
Sbjct: 421 AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF 480
Query: 457 DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
DFMDPPAPET+MRALE LNYL LDD+GNLT +G S+FPLDP ++ ML+ S ++ CS
Sbjct: 481 DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQ 540
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP---- 572
EIL+I AMLSVPN F+RP + +K AD+AK F H DGDH+TLLNVYHA+K +
Sbjct: 541 EILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIH 600
Query: 573 SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQV 632
WC D+++N+R+L +ADN+R QL R+M R+NL+L + D+ S Y+ NIRKA+ +G+FMQV
Sbjct: 601 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQV 660
Query: 633 AHLERTGQ--YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
A +R+G Y+TVKDNQ V +HPS L H EWVIYNE+VLTS+N+IRTVT VR EWLI
Sbjct: 661 AK-KRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLI 719
Query: 691 DIAPHYYDLSNF 702
+IAP YYDLSNF
Sbjct: 720 EIAPAYYDLSNF 731
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 2083 (738.3 bits), Expect = 1.4e-215, P = 1.4e-215
Identities = 413/669 (61%), Positives = 513/669 (76%)
Query: 44 NRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVL 103
N + G ++ +Y++IL+ R+ LPV Q+EEFL++ + Q+++ VGETGSGKTTQIPQFVL
Sbjct: 73 NPFTGHDFTTKYFDILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVL 132
Query: 104 EGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTV 163
D E P K +ACTQP +EMDV +GEEVGY+IRFE+ S +T+
Sbjct: 133 --YD-EMPHLTGKQ-VACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTI 188
Query: 164 LKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMS 223
LKY+TDGMLLREAM D L RY I+LDEAHERTLATD+L GLLK+V RPDLK+++MS
Sbjct: 189 LKYMTDGMLLREAMEDHDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMS 248
Query: 224 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDIL 283
ATL+AEKFQ YF APL+ VPGR HPVEI+YT E +RDYL+AAIRTV+QIH E GDIL
Sbjct: 249 ATLDAEKFQNYFNNAPLLAVPGRTHPVEIYYTPEFQRDYLDAAIRTVLQIHATEGEGDIL 308
Query: 284 VFLTGEEEIEDACRKITKEITNM-GDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
+FLTGEEEIEDACRKI+ E + +Q GP+KV PLY +LPP QQKIFE
Sbjct: 309 LFLTGEEEIEDACRKISLEGDELVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPNPN 368
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK+++STNIAETSLTIDGIVYV+DPGF+KQKVYNPRVRVESLLVSPISKASA QR+
Sbjct: 369 GRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRA 428
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTE++F +L Q+YPEILRSNL++TVL LKKLGIDDLVHFDFMDP
Sbjct: 429 GRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDP 488
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPET+MRALE LNYL L D+G+LT +G S+FPLDP ++ ML+ SP Y+CS EIL+I
Sbjct: 489 PAPETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLIGSPAYSCSEEILTI 548
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY--KQNNE--DPSWCYD 577
AMLSVPN FVRP A+K ADEAK F DGDHLTL+NVY A+ + +E WC D
Sbjct: 549 VAMLSVPNVFVRPASARKRADEAKLSFAQADGDHLTLINVYEAFISPEASEIGTHKWCRD 608
Query: 578 NFVNHRALKSADNVRQQLVRIMARFNLKLCS--NDFNSRDYYVNIRKAMLAGYFMQVAHL 635
NF+++R+L SA NVR QL R+M +++L+L S N + +Y+ N++KA++AG+FMQVA
Sbjct: 609 NFLSYRSLTSAKNVRNQLQRLMQKYDLQLISQYNQVSEFEYWENVKKALVAGFFMQVAK- 667
Query: 636 ERTGQ--YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIA 693
+++G YLTVKDNQ V +HPS L + EW+IYNE+VLTS+N+IRTVT V+ EWL++IA
Sbjct: 668 KKSGNKGYLTVKDNQDVLIHPSTVLSKEGEWLIYNEFVLTSKNYIRTVTVVKPEWLVEIA 727
Query: 694 PHYYDLSNF 702
P YY+L +F
Sbjct: 728 PKYYNLDHF 736
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 2069 (733.4 bits), Expect = 4.2e-214, P = 4.2e-214
Identities = 396/671 (59%), Positives = 508/671 (75%)
Query: 44 NRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVL 103
N + G +SQ+Y++IL+ R++LPV Q ++EFL V Q+++ VGETGSGKTTQIPQ+VL
Sbjct: 86 NAFTGGSHSQQYFKILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVL 145
Query: 104 EGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTV 163
D E P +KM +ACTQP +E+DV +G+EVGYSIRFE+ ++ T+
Sbjct: 146 --YD-ELPHLNKKM-VACTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTI 201
Query: 164 LKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMS 223
LKY+TDG LLRE + DP + RY I++DEAHERTLATD+L LLK++ R DLK+++MS
Sbjct: 202 LKYMTDGQLLRETIHDPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMS 261
Query: 224 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDIL 283
ATL+A KFQ YF+ AP++ VPGR HPVEIFYT E ERDY+EA++RTV+QIH E GDIL
Sbjct: 262 ATLDAAKFQRYFFEAPILAVPGRTHPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDIL 321
Query: 284 VFLTGEEEIEDACRKITKEITNM-GD-QVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
+FLTGEEEIED CRK+ E+ + D GP++V PLY TLPP QQKIF
Sbjct: 322 LFLTGEEEIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKG 381
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK +V+TNIAETSLTIDGIVYV+DPGF+KQK+YN R+RVESLLV+PIS+ASA QR+
Sbjct: 382 GRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRA 441
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTE +F +L QTYPEILRSNL+NT+L LKKLG+DDLVHFDFMDP
Sbjct: 442 GRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMDP 501
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPET+MRALE LNYL L+DDG+LT++G SE+PLDP ++ MLV SP++ CSNE+LS+
Sbjct: 502 PAPETMMRALEELNYLSCLNDDGDLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLSV 561
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYK----QNNEDPSWCYD 577
+++LSVP F+RP +K ADE K F H++GDHLTLLN YHA+K + + WC++
Sbjct: 562 TSLLSVPQVFMRPANNRKRADEMKEHFKHMEGDHLTLLNAYHAFKSEMAKGTDMKKWCHE 621
Query: 578 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
+F+++R L SADNVR QL IM R +L+L S F ++YY NIR+ ++AG+FMQVA E
Sbjct: 622 HFLSYRHLSSADNVRAQLKGIMERQDLELVSTPFTDKNYYTNIRRCLVAGFFMQVALRET 681
Query: 638 TGQ-YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 696
+G+ Y T+KDNQ V LHPS+ L EWV+Y+E+VLTS+ +IRTVT +R EWLIDIAP+Y
Sbjct: 682 SGKVYHTIKDNQNVMLHPSSVLTTDYEWVLYHEFVLTSKQYIRTVTGIRPEWLIDIAPNY 741
Query: 697 YDLSNFPQCEA 707
YDL NF +A
Sbjct: 742 YDLDNFEDDQA 752
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 1688 (599.3 bits), Expect = 7.4e-176, Sum P(2) = 7.4e-176
Identities = 326/653 (49%), Positives = 458/653 (70%)
Query: 51 YSQRY-YEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE 109
+ QR I E+R+SLP+++ K+E +Q + NQV++++GETGSGKTTQ+ Q++ E
Sbjct: 500 FGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA---- 555
Query: 110 TPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTD 169
K I CTQP EE +GEEVGY+IRFEDC+ TV+KY+TD
Sbjct: 556 --GYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 613
Query: 170 GMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAE 229
GMLLRE + D L +Y VI+LDEAHERT+ TDVLFGLLK+++K R DL+L+V SATL+AE
Sbjct: 614 GMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAE 673
Query: 230 KFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGE 289
KF GYF+ + +PGR PVEI YT++PE DYL+AA+ TV+QIH+ EP GDILVFLTG+
Sbjct: 674 KFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQ 733
Query: 290 EEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIV 349
EEI+ AC+ + + + +G V + ++P+YS LP MQ +IF+ RK+V
Sbjct: 734 EEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGK-------RKVV 786
Query: 350 VSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQP 409
V+TNIAE SLTIDGI YV+DPGFAKQ VYNP+ +ESL+++PIS+ASA QR+GRAGRT P
Sbjct: 787 VATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGP 846
Query: 410 GKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMR 469
GKC+RLYTE ++ N++ P + PEI R NL T LT+K +GI+DL+ FDFMDPP P+ L+
Sbjct: 847 GKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALIS 906
Query: 470 ALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPN 529
A+E L LGALD++G LT++G KM+EFPL+P +SKML+ S CS+EIL++ AM+ N
Sbjct: 907 AMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN 966
Query: 530 CFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSAD 589
F RPRE Q AD+ +A+F +GDHLTLL VY A+K N WC++NF+ R+L+ A
Sbjct: 967 IFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQ 1026
Query: 590 NVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQV 649
+VR+QL+ IM ++ L + + N + IRKA+ AG+F A + Y T+ +NQ
Sbjct: 1027 DVRKQLLSIMDKYKLDVVTAGKN----FTKIRKAITAGFFFHGARKDPQEGYRTLVENQP 1082
Query: 650 VHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
V++HPS+ L +P+WVIY++ V+T++ ++R VT + +WL+++AP ++ +S+
Sbjct: 1083 VYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSD 1135
Score = 42 (19.8 bits), Expect = 7.4e-176, Sum P(2) = 7.4e-176
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 15 VDETSVSA-KLVKTNGVGPGAMMNNNNSLINRWNGK 49
V +T +S ++V+ N V P S RW K
Sbjct: 319 VTKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAK 354
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 1708 (606.3 bits), Expect = 7.5e-176, P = 7.5e-176
Identities = 331/649 (51%), Positives = 462/649 (71%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
E+ E R+SLP++ +++ L+ ++ +QV+++VG+TGSGKTTQIPQ++ E +R K
Sbjct: 396 ELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEA----GYTKRGK 451
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
+ CTQP +EM V +G EVGYSIRFEDC+S +TVLKY+TDGMLLRE
Sbjct: 452 --VGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREL 509
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 236
+ +P L Y V+++DEAHERTL+TD+LFGL+K++ + RPDLKL++ SAT++AEKF YF
Sbjct: 510 LGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFD 569
Query: 237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDAC 296
AP+ PGR +PVEI YT PE DY++AAI T++ IH+ EP GDILVF TG+EEIE A
Sbjct: 570 TAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAE 629
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAE 356
+ I +G ++ + + P+Y+ LP +Q KIFE RK+V++TNIAE
Sbjct: 630 EILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGA-------RKVVLATNIAE 682
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TSLTIDGI YV+DPGF+K K YNPR +ESLL++PISKASA QR+GRAGRT PGKC+RLY
Sbjct: 683 TSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLY 742
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
T ++NNDL+ T PE+ R+NLA+ VL LK LGI DL++FDFMDPP E L+++LE+L
Sbjct: 743 TAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFA 802
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVP-NCFVRPR 535
LGAL+ G LT+ G +M+EFPLDP +SKM+V S KY CS+EI+SI+AMLS+ + F RP+
Sbjct: 803 LGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPK 862
Query: 536 EAQKAADEAKARF--GHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQ 593
+ Q AD A+ F G++ GDH+ LL VY ++K+ N WCY+N++ R++K A ++R
Sbjct: 863 DKQVHADNARMNFHTGNV-GDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRD 921
Query: 594 QLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLH 653
QL ++ R + + SN N D ++RK+++AG+F A L++ G Y TVK Q VH+H
Sbjct: 922 QLEGLLERVEIDISSN-LNELD---SVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIH 977
Query: 654 PSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
P++ L P WV+Y+E VLTS+ ++R VT+++ EWLI++APHYY L +
Sbjct: 978 PNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKD 1026
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 1705 (605.2 bits), Expect = 1.6e-175, P = 1.6e-175
Identities = 331/648 (51%), Positives = 454/648 (70%)
Query: 52 SQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETP 111
+Q I E RKSLPV+ +E+ + ++ QV+I+VGETGSGKTTQIPQ++ E +T
Sbjct: 454 AQAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTG 513
Query: 112 DRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGM 171
I CTQP EE+ +G EVGYSIRFEDC+S +TVL+Y+TDGM
Sbjct: 514 K------IGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGM 567
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
L+RE +T P L Y V+++DEAHERTL TD+LFGLLK++ + RPDLKL++ SAT++AE+F
Sbjct: 568 LVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERF 627
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
YF GAP +PGR + V YTQ PE DYL+AA+ TV+QIH+ EP GDILVFLTG+EE
Sbjct: 628 SDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEE 687
Query: 292 IEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVS 351
++ A + +G ++ + + +YSTLP +Q KIFE RK+V++
Sbjct: 688 VDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNA-------RKVVLA 740
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETSLTIDGI+YVIDPGF KQK++NPR +ESL+++P+S+ASA+QR GRAGR PGK
Sbjct: 741 TNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGK 800
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
CFRL+T +F+N+L+ T PEI R+NL N VL LK +GI+DL++FDFMDPP +TL+ AL
Sbjct: 801 CFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAAL 860
Query: 472 EVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC- 530
E L LGAL+D G LT++G KM+EFP+DPQ+SKM++ S KY CS EIL+I AMLSV N
Sbjct: 861 EQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTI 920
Query: 531 FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 590
F RP++ AAD A+ F H GDHLTL+NV++ ++++ WC++NF+ HR++K A +
Sbjct: 921 FYRPKDKAFAADAARKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQD 980
Query: 591 VRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVV 650
VR QL ++ R + L SN + D +IRK + +G+F A LE++G + T K NQ V
Sbjct: 981 VRDQLELLLERVEIPLVSN-VDDTD---SIRKCIASGFFYNSAKLEKSGLFRTTKHNQSV 1036
Query: 651 HLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
+HPS+CL P+WV+Y+E VLT++ F+R + +++ WL +IAPH Y
Sbjct: 1037 QIHPSSCLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIY 1084
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 1696 (602.1 bits), Expect = 1.4e-174, P = 1.4e-174
Identities = 328/645 (50%), Positives = 462/645 (71%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E+R+SLP++ +E FLQ + +Q+++++GETGSGKTTQ+ Q++ E T R K
Sbjct: 501 IKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEA-GYGT---RGK- 555
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQP EE +G+EVGY+IRFEDC+S T++K++TDG+LLRE +
Sbjct: 556 -IGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECL 614
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
DP L Y VI+LDEAHERT++TDVLFGLLK+ L+ RP+LK+++ SATLEAEKF YF
Sbjct: 615 LDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMN 674
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
A L +PGR PV+I YT++PE DYL+A++ TV+QIH+ EP GDIL+FLTG+EEI+ AC+
Sbjct: 675 AQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQ 734
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+ + + ++G V + ++P+YS LP MQ KIFE RK+V++TNIAET
Sbjct: 735 ILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGS-------RKVVIATNIAET 787
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLTIDGI YVIDPGF+KQK +NP+ ++SL+V+PIS+A+A QRSGRAGRT PGKC+RLYT
Sbjct: 788 SLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYT 847
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
E +F N++ + PEI R+NL NTVLT+K +GI+DL++FDFMDPP +TL+ A+E L L
Sbjct: 848 ESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSL 907
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD++G LT +G KM+EFPLDPQ+SKML+ S CS+EIL++ AMLSV N F RP+E
Sbjct: 908 GALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEK 967
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
Q AD+ KA+F +GDHLTLLNVY ++K + WC++NFV R+L+ A +VR+QL+
Sbjct: 968 QALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLIT 1027
Query: 598 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC 657
IM R+ L + S N Y I+KA+ +G+F + + Y T+ + Q V++HPS+
Sbjct: 1028 IMDRYKLDIISAGRN----YTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSST 1083
Query: 658 L-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
L + P+WVIY+E V+T++ ++R V + +WL+++AP ++ S+
Sbjct: 1084 LFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSD 1128
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 1680 (596.4 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 326/657 (49%), Positives = 462/657 (70%)
Query: 47 NGKPYSQR-YYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG 105
N Y ++ ILE+R+SLP+++ KE+ +Q + NQ++I++GETGSGKTTQI Q++ E
Sbjct: 546 NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 605
Query: 106 VDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLK 165
R K I CTQP EE +G+EVGY+IRFEDC+S TV+K
Sbjct: 606 GYTS----RGK--IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIK 659
Query: 166 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SAT
Sbjct: 660 YMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSAT 719
Query: 226 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 285
L+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILVF
Sbjct: 720 LDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVF 779
Query: 286 LTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
LTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 780 LTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------- 832
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRAG
Sbjct: 833 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 892
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P E
Sbjct: 893 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 952
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
TL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +ML
Sbjct: 953 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSML 1012
Query: 526 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 585
SV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+L
Sbjct: 1013 SVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSL 1072
Query: 586 KSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVK 645
+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1073 RRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTLI 1128
Query: 646 DNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1129 DQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1185
Score = 37 (18.1 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 87 VGETGSGKTTQIPQF 101
+G+ +GK T I QF
Sbjct: 264 IGDIYNGKVTSIMQF 278
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 1680 (596.4 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 326/657 (49%), Positives = 462/657 (70%)
Query: 47 NGKPYSQR-YYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG 105
N Y ++ ILE+R+SLP+++ KE+ +Q + NQ++I++GETGSGKTTQI Q++ E
Sbjct: 570 NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 629
Query: 106 VDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLK 165
R K I CTQP EE +G+EVGY+IRFEDC+S TV+K
Sbjct: 630 GYTS----RGK--IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIK 683
Query: 166 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SAT
Sbjct: 684 YMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSAT 743
Query: 226 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 285
L+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILVF
Sbjct: 744 LDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVF 803
Query: 286 LTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
LTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 804 LTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------- 856
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRAG
Sbjct: 857 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 916
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P E
Sbjct: 917 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 976
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
TL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +ML
Sbjct: 977 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSML 1036
Query: 526 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 585
SV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+L
Sbjct: 1037 SVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSL 1096
Query: 586 KSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVK 645
+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1097 RRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTLI 1152
Query: 646 DNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1153 DQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1209
Score = 37 (18.1 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 87 VGETGSGKTTQIPQF 101
+G+ +GK T I QF
Sbjct: 288 IGDIYNGKVTSIMQF 302
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 1680 (596.4 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 326/657 (49%), Positives = 462/657 (70%)
Query: 47 NGKPYSQR-YYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG 105
N Y ++ ILE+R+SLP+++ KE+ +Q + NQ++I++GETGSGKTTQI Q++ E
Sbjct: 515 NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 574
Query: 106 VDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLK 165
R K I CTQP EE +G+EVGY+IRFEDC+S TV+K
Sbjct: 575 GYTS----RGK--IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIK 628
Query: 166 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SAT
Sbjct: 629 YMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSAT 688
Query: 226 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 285
L+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILVF
Sbjct: 689 LDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVF 748
Query: 286 LTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
LTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 749 LTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------- 801
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRAG
Sbjct: 802 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 861
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P E
Sbjct: 862 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 921
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
TL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +ML
Sbjct: 922 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSML 981
Query: 526 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 585
SV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+L
Sbjct: 982 SVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSL 1041
Query: 586 KSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVK 645
+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1042 RRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTLI 1097
Query: 646 DNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1098 DQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1154
Score = 37 (18.1 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 87 VGETGSGKTTQIPQF 101
+G+ +GK T I QF
Sbjct: 233 IGDIYNGKVTSIMQF 247
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 1680 (596.4 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 326/657 (49%), Positives = 462/657 (70%)
Query: 47 NGKPYSQR-YYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG 105
N Y ++ ILE+R+SLP+++ KE+ +Q + NQ++I++GETGSGKTTQI Q++ E
Sbjct: 568 NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 627
Query: 106 VDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLK 165
R K I CTQP EE +G+EVGY+IRFEDC+S TV+K
Sbjct: 628 GYTS----RGK--IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIK 681
Query: 166 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SAT
Sbjct: 682 YMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSAT 741
Query: 226 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 285
L+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILVF
Sbjct: 742 LDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVF 801
Query: 286 LTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
LTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 802 LTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------- 854
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRAG
Sbjct: 855 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 914
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P E
Sbjct: 915 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 974
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
TL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +ML
Sbjct: 975 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSML 1034
Query: 526 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 585
SV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+L
Sbjct: 1035 SVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSL 1094
Query: 586 KSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVK 645
+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1095 RRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTLI 1150
Query: 646 DNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1151 DQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1207
Score = 37 (18.1 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 87 VGETGSGKTTQIPQF 101
+G+ +GK T I QF
Sbjct: 286 IGDIYNGKVTSIMQF 300
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 1678 (595.7 bits), Expect = 2.8e-174, Sum P(2) = 2.8e-174
Identities = 325/657 (49%), Positives = 462/657 (70%)
Query: 47 NGKPYSQR-YYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG 105
N Y ++ I+E+R+SLP+++ KE+ +Q + NQ++I++GETGSGKTTQI Q++ E
Sbjct: 556 NKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 615
Query: 106 VDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLK 165
R K I CTQP EE +G+EVGY+IRFEDC+S TV+K
Sbjct: 616 GYTS----RGK--IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIK 669
Query: 166 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SAT
Sbjct: 670 YMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSAT 729
Query: 226 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 285
L+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILVF
Sbjct: 730 LDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVF 789
Query: 286 LTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
LTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 790 LTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------- 842
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRAG
Sbjct: 843 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 902
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P E
Sbjct: 903 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 962
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
TL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +ML
Sbjct: 963 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSML 1022
Query: 526 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 585
SV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+L
Sbjct: 1023 SVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSL 1082
Query: 586 KSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVK 645
+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1083 RRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTLI 1138
Query: 646 DNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1139 DQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1195
Score = 37 (18.1 bits), Expect = 2.8e-174, Sum P(2) = 2.8e-174
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 87 VGETGSGKTTQIPQF 101
+G+ +GK T I QF
Sbjct: 274 IGDIYNGKVTSIMQF 288
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 1678 (595.7 bits), Expect = 2.8e-174, Sum P(2) = 2.8e-174
Identities = 325/657 (49%), Positives = 462/657 (70%)
Query: 47 NGKPYSQR-YYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG 105
N Y ++ I+E+R+SLP+++ KE+ +Q + NQ++I++GETGSGKTTQI Q++ E
Sbjct: 542 NKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 601
Query: 106 VDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLK 165
R K I CTQP EE +G+EVGY+IRFEDC+S TV+K
Sbjct: 602 GYTS----RGK--IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIK 655
Query: 166 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SAT
Sbjct: 656 YMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSAT 715
Query: 226 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 285
L+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILVF
Sbjct: 716 LDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVF 775
Query: 286 LTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
LTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 776 LTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------- 828
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRAG
Sbjct: 829 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 888
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P E
Sbjct: 889 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 948
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
TL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +ML
Sbjct: 949 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSML 1008
Query: 526 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 585
SV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+L
Sbjct: 1009 SVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSL 1068
Query: 586 KSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVK 645
+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1069 RRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTLI 1124
Query: 646 DNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1125 DQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1181
Score = 37 (18.1 bits), Expect = 2.8e-174, Sum P(2) = 2.8e-174
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 87 VGETGSGKTTQIPQF 101
+G+ +GK T I QF
Sbjct: 260 IGDIYNGKVTSIMQF 274
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 1678 (595.7 bits), Expect = 2.8e-174, Sum P(2) = 2.8e-174
Identities = 325/657 (49%), Positives = 462/657 (70%)
Query: 47 NGKPYSQR-YYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG 105
N Y ++ I+E+R+SLP+++ KE+ +Q + NQ++I++GETGSGKTTQI Q++ E
Sbjct: 538 NKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 597
Query: 106 VDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLK 165
R K I CTQP EE +G+EVGY+IRFEDC+S TV+K
Sbjct: 598 GYTS----RGK--IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIK 651
Query: 166 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SAT
Sbjct: 652 YMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSAT 711
Query: 226 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 285
L+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILVF
Sbjct: 712 LDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVF 771
Query: 286 LTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
LTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 772 LTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------- 824
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRAG
Sbjct: 825 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 884
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P E
Sbjct: 885 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 944
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
TL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +ML
Sbjct: 945 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSML 1004
Query: 526 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 585
SV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+L
Sbjct: 1005 SVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSL 1064
Query: 586 KSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVK 645
+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1065 RRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTLI 1120
Query: 646 DNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
D QVV++HPS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1121 DQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1177
Score = 37 (18.1 bits), Expect = 2.8e-174, Sum P(2) = 2.8e-174
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 87 VGETGSGKTTQIPQF 101
+G+ +GK T I QF
Sbjct: 256 IGDIYNGKVTSIMQF 270
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 1693 (601.0 bits), Expect = 2.9e-174, P = 2.9e-174
Identities = 327/641 (51%), Positives = 454/641 (70%)
Query: 60 EKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMI 119
E R+SLPV+ KE+ + +K +QV+I+ GETGSGKTTQ+PQ+++E T D++ MI
Sbjct: 247 ETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGF--TKDKK---MI 301
Query: 120 ACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTD 179
CTQP EEM V +G EVGYSIRFEDC+S RT+LKY+TDG L RE +++
Sbjct: 302 GCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSE 361
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
P L Y V+++DEAHERTL TD+LFGL+K++ + RP+LKL++ SATL+AEKF +F AP
Sbjct: 362 PDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAP 421
Query: 240 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKI 299
+ ++PGR +PV+IFYT+ PE DY++A +V+QIH +P GDILVFLTG++EIE C+++
Sbjct: 422 IFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIE-TCQEV 480
Query: 300 TKE-ITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETS 358
+ + +G ++ + V+P+Y+ LP MQ KIFE RK++++TNIAETS
Sbjct: 481 LHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNA-------RKVILATNIAETS 533
Query: 359 LTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTE 418
LTID I+YVIDPGFAKQ +N R +ESL+V PISKASA+QR+GRAGRT PGKCFRLYT
Sbjct: 534 LTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTA 593
Query: 419 KSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLG 478
++ ++L+ T PEI R NL N VL LK LGI+DL+HFDF+DPP ETL+ ALE L LG
Sbjct: 594 WAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALG 653
Query: 479 ALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPREA 537
AL+ G LT++G +M+EFP+DP M KML+ S KY CS E+++I+AMLSV + F RP++
Sbjct: 654 ALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDK 713
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
AD A+ F H+ GDHL+LL VY+ + + + WCY+NF+ +R++K A +VR+QLV
Sbjct: 714 IIHADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVG 773
Query: 598 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC 657
+M R + + S VN+RKA AGYF VA L + G Y T+K NQ V +HP++
Sbjct: 774 LMQRVEIDMVS----CLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSS 829
Query: 658 L-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
L + P WV+Y+E V TS+ ++R V ++ +WL+++APHYY
Sbjct: 830 LFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYY 870
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 1680 (596.4 bits), Expect = 6.9e-173, P = 6.9e-173
Identities = 326/651 (50%), Positives = 458/651 (70%)
Query: 55 YYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRR 114
++ + E RK+LP++ +++ L +K +QV+I+VGETGSGKTTQIPQ++ E
Sbjct: 394 FHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEA------GYT 447
Query: 115 RKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLR 174
+ + CTQP +EM +G EVGYSIRFEDC+S +T+LKY+TDGMLLR
Sbjct: 448 KLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 507
Query: 175 EAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGY 234
E + +P L Y VI++DEAHERTL TD+LFGL+K++ + RPDLKL++ SAT++AEKF +
Sbjct: 508 ELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDF 567
Query: 235 FYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIED 294
F AP+ + PGR +PV+I +T PE DY++AAI TV+ IH+ EP GD+LVFL G+EEIE
Sbjct: 568 FDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEA 627
Query: 295 ACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNI 354
+ +I +G ++ + + P+Y+ LP +Q KIFE RK+V++TNI
Sbjct: 628 VEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGA-------RKVVLATNI 680
Query: 355 AETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFR 414
AETSLTIDGI YV+DPGF+K K YNPR +ESLLV+PISKASA QR+GRAGRT PGKC+R
Sbjct: 681 AETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYR 740
Query: 415 LYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVL 474
LYT ++ NDL+ T PEI R+NLA+ VL+LK LGI +L++FDFMDPP E L+++LE+L
Sbjct: 741 LYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELL 800
Query: 475 NYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV-PNCFVR 533
LGAL+ G LT+ G +M+EFPLDP +SKM+V S KY CS+EI+SI+AMLS+ P+ F R
Sbjct: 801 FALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYR 860
Query: 534 PREAQKAADEAKARFGHID--GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNV 591
P++ Q AD A F H+ GDH+ L +Y+++K+ N WCY+N++ R++K A ++
Sbjct: 861 PKDKQVHADNAMKNF-HVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDI 919
Query: 592 RQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVH 651
R QL ++ R + + SN N D +IRK+++AG+F A L++ G Y TVK Q VH
Sbjct: 920 RDQLEGLLERVEIDVSSNA-NELD---SIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVH 975
Query: 652 LHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
+HP++ L P WV+Y++ VLTS+ ++R VT+++ EWLI+IAPHYY L +
Sbjct: 976 IHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKD 1026
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 1679 (596.1 bits), Expect = 8.9e-173, P = 8.9e-173
Identities = 338/709 (47%), Positives = 480/709 (67%)
Query: 6 KRKVSLFDVVDETSVSAKL----VKTNGVGPGAMMNNNNSLINRW-------NGKPYSQR 54
K V F++ D VS+ + + N G G M N+ I W N Y ++
Sbjct: 446 KGMVLHFEICDNGLVSSLMDGRQIAANMRGIGMMPND----IPEWKKHAFGGNKASYGKK 501
Query: 55 -YYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
I+E+R+SLP+++ KE+ +Q + NQ++I++GETGSGKTTQI Q++ E
Sbjct: 502 TQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS---- 557
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLL 173
R K I CTQP EE +G+EVGY+IRFEDC+S TV+KY+TDGMLL
Sbjct: 558 RGK--IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLL 615
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 233
RE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SATL+A KF
Sbjct: 616 RECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQ 675
Query: 234 YFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIE 293
YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILVFLTG+EEI+
Sbjct: 676 YFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEID 735
Query: 294 DACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTN 353
AC + + + ++G V + ++P+YS LP MQ +IF+ RK+V++TN
Sbjct: 736 TACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS-------RKVVIATN 788
Query: 354 IAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCF 413
IAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRAGRT PGKC+
Sbjct: 789 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY 848
Query: 414 RLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEV 473
RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P ETL+ A+E
Sbjct: 849 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ 908
Query: 474 LNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVR 533
L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +MLSV N F R
Sbjct: 909 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR 968
Query: 534 PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQ 593
P++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+L+ A ++R+
Sbjct: 969 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK 1028
Query: 594 QLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLH 653
Q++ IM R L + S + V ++KA+ +G+F A + Y T+ D QVV++H
Sbjct: 1029 QMLGIMDRHKLDVVSCGKAT----VRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH 1084
Query: 654 PSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
PS+ L + +PEWV+Y+E VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1085 PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1133
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 1676 (595.0 bits), Expect = 1.8e-172, P = 1.8e-172
Identities = 334/691 (48%), Positives = 473/691 (68%)
Query: 20 VSAKLVKTNGVGPGAMMNNNNSLINRW-------NGKPYSQR-YYEILEKRKSLPVWQQK 71
V + + N G G M N+ I W N Y ++ ILE+R+SLP+++ K
Sbjct: 506 VDGRQIAANMRGIGMMPND----IPEWKKHAFGGNKASYGKKTQLSILEQRESLPIYKLK 561
Query: 72 EEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXX 131
E+ +Q + NQ++I++GETGSGKTTQI Q++ E T R K I CTQP
Sbjct: 562 EQLIQAVHDNQILIVIGETGSGKTTQITQYLAEA-GYTT---RGK--IGCTQPRRVAAMS 615
Query: 132 XXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLD 191
EE +G+EVGY+IRFEDC+S TV+KY+TDGMLLRE + DP L +Y +I+LD
Sbjct: 616 VAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLGQYAIIMLD 675
Query: 192 EAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVE 251
EAHERT+ TDVLFGLLK+ ++ R D+KL+V SATL+A KF YFY AP+ +PGR +PVE
Sbjct: 676 EAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 735
Query: 252 IFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVG 311
+ YT+EPE DYL+A++ TV+QIH+ EP GDILVFLTG+EEI+ AC + + + ++G V
Sbjct: 736 VLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVP 795
Query: 312 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 371
+ ++P+YS LP MQ +IF+ RK+V++TNIAETSLTIDGI YV+DPG
Sbjct: 796 ELIILPVYSALPSEMQTRIFDPAPPGS-------RKVVIATNIAETSLTIDGIYYVVDPG 848
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
F KQKVYN + ++ L+V+PIS+A A QR+GRAGRT PGKC+RLYTE+++ +++ P
Sbjct: 849 FVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVP 908
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
EI R+NLA+TVL+LK +GI+DL+ FDFMD P ETL+ A+E L LGALDD+G LT +G
Sbjct: 909 EIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGR 968
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI 551
+M+EFPL+P + KML+ S CS E+L+I +MLSV N F RP++ Q AD+ KA+F
Sbjct: 969 RMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQP 1028
Query: 552 DGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDF 611
+GDHLTLL VY+++K N WCY+NF+ R+L+ A ++R+Q++ IM R L + S
Sbjct: 1029 EGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGK 1088
Query: 612 NSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEY 670
+ V ++KA+ +G+F A + Y T+ D QVV++HPS+ L + +PEWV+Y+E
Sbjct: 1089 AT----VRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHEL 1144
Query: 671 VLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
VLT++ ++R VT + WL++ AP ++ +S+
Sbjct: 1145 VLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1175
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 1674 (594.3 bits), Expect = 3.0e-172, P = 3.0e-172
Identities = 322/647 (49%), Positives = 458/647 (70%)
Query: 60 EKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMI 119
E+R+ LPV++ +++FL+ + NQ+++L+GETGSGKTTQI Q++ E + T D + MI
Sbjct: 505 EQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAE--EGYTSDSK---MI 559
Query: 120 ACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTD 179
CTQP EE+ +GEEVGY+IRFED +S T +KY+TDGML RE + D
Sbjct: 560 GCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVD 619
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
PLL +Y VI+LDEAHERT+ATDVLFGLLK + RPDLKL+V SATL+AE+F YFY P
Sbjct: 620 PLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCP 679
Query: 240 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKI 299
+ +PGR +PVEI YT++PE DYL+AA+ TV+QIH+ E GDILVFLTG+EEI+ +C +
Sbjct: 680 IFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEIL 739
Query: 300 TKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSL 359
+ +GD + + ++P+YS LP +Q +IFE RK+V++TNIAETSL
Sbjct: 740 YERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGG-------RKVVIATNIAETSL 792
Query: 360 TIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEK 419
TIDGI YV+DPGF KQ ++P++ ++SL+V+PIS+A A QRSGRAGRT PGKC+RLYTE
Sbjct: 793 TIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTES 852
Query: 420 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 479
++ N++ P PEI R NL++T+L LK +GI+DL++FDFMDPP +T++ AL+ L L A
Sbjct: 853 AYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSA 912
Query: 480 LDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQK 539
LDD+G LT +G KM++FP++PQ+SK+L+ S + CS E+LSI AMLSVPN + RPRE Q+
Sbjct: 913 LDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQ 972
Query: 540 AADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIM 599
AD +A+F + + DHLTLLNVY +K N +WCY++++ R ++ A++VR+QL+R+M
Sbjct: 973 EADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLM 1032
Query: 600 ARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLE-RTGQYLTVKDNQVVHLHPSNCL 658
R+ + S R+ I +A+ +GYF VA + G Y T+ +N V++HPS L
Sbjct: 1033 DRYRHPVVSCG-RKREL---ILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVL 1088
Query: 659 DHKP-EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQ 704
K EWVIY+E + TS+ ++ TV+ V +WL+++AP ++ +N Q
Sbjct: 1089 FGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQ 1135
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 1666 (591.5 bits), Expect = 2.1e-171, P = 2.1e-171
Identities = 325/646 (50%), Positives = 460/646 (71%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLE-GVDIETPDRRRK 116
++E+R+SLP+++ +++ ++ + NQ++I++GETGSGKTTQI Q++ E G R K
Sbjct: 579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTA-----RGK 633
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
I CTQP EE +G+EVGY+IRFEDC+S T++KY+TDGMLLRE
Sbjct: 634 --IGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLREC 691
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 236
+ + L+ Y VI+LDEAHERT+ TDVLFGLLK ++ RP+LKL+V SATL+A KF YF+
Sbjct: 692 LMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFF 751
Query: 237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDAC 296
AP+ +PGR PVE+ YT+EPE DYL+A++ TV+QIH+ EP GDIL+FLTG+EEI+ AC
Sbjct: 752 KAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTAC 811
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAE 356
+ + + ++G V + ++P+YS LP MQ +IF+ RK+V++TNIAE
Sbjct: 812 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGS-------RKVVIATNIAE 864
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TSLTIDGI YV+DPGF KQKVYN + ++SL+V+PIS+A+A QR+GRAGRT PGK +RLY
Sbjct: 865 TSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLY 924
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
TE+++ +++ P PEI R+NLA TVL LK +GI+DL+HFDFMD P E+L+ ALE L+
Sbjct: 925 TERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHS 984
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
L ALDD+G LT +G +M+EFPL+P +SKML+ S CS+EIL+I +MLSV N F RP++
Sbjct: 985 LSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKD 1044
Query: 537 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLV 596
Q AD+ KA+F +GDHLTLL VY+++K N +WCY+NFV R LK + +VR+QL+
Sbjct: 1045 KQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLL 1104
Query: 597 RIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSN 656
IM R L + S NS V I+KA+ +G+F A + Y T+ D+QVV++HPS+
Sbjct: 1105 GIMDRHKLDVVSAGKNS----VRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSS 1160
Query: 657 CL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
L + +PEWVIY+E V T++ ++R VT + +WL++ AP ++ S+
Sbjct: 1161 ALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSD 1206
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 1665 (591.2 bits), Expect = 2.7e-171, P = 2.7e-171
Identities = 324/642 (50%), Positives = 449/642 (69%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E R+SLP++ +E+ L + +Q++++ GETGSGKTTQIPQ++LE + T + M
Sbjct: 405 IQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLE--EGYT---KGGM 459
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQP +EM V +G EVGYSIRFEDC+S RT+LKY+TDGMLLRE +
Sbjct: 460 KIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFL 519
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
T+P L Y VI++DEAHERTL TD+LFGL+K++ + RPDLK++V SATL+ E+F +F
Sbjct: 520 TEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFDD 579
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
AP+ ++PGR PV+I+YT+ PE DYLEA + +V+QIH+ + GD+LVFLTG+EEIE C
Sbjct: 580 APVFRIPGRRFPVDIYYTKAPEADYLEACVVSVLQIHVTQSPGDVLVFLTGQEEIEACCE 639
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+ + +G ++ + V+P+Y+ LP MQ KIF RK+VV+TNIAET
Sbjct: 640 LLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGA-------RKVVVATNIAET 692
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLTIDGI+YVIDPGF KQK YN + +ESL+V+P S+ASA+QR+GRAGR GKCFRLYT
Sbjct: 693 SLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYT 752
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+F ++++ T PEI R+NL N VL LK LGI+DL+HFDFMDPP ETL+ ALE L L
Sbjct: 753 AWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYAL 812
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPRE 536
GAL+ G LT++G +M+E P+DP +SKM++ S +Y CS E+L+I+AMLSV N F RP++
Sbjct: 813 GALNHLGELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKD 872
Query: 537 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLV 596
AD A+ F GDHL LLNVY + ++ WC++NF+ R++K A +VR QL
Sbjct: 873 KVVHADNARMNFVVPGGDHLVLLNVYTQWVESGYSTQWCFENFIQFRSMKRARDVRDQLE 932
Query: 597 RIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSN 656
+M R ++LCS++ +S + IRKA+ AGYF A L + G Y TVK Q V++HP++
Sbjct: 933 GLMDRIEVELCSSNGDS----MPIRKAVTAGYFYHTARLSKGG-YKTVKHQQTVYVHPNS 987
Query: 657 CL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
L + +P W+IY+E V T++ F+R V ++ WL+++APHYY
Sbjct: 988 SLFEEQPRWMIYHELVFTTKEFMRQVIEIESGWLLEVAPHYY 1029
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 1657 (588.4 bits), Expect = 1.9e-170, P = 1.9e-170
Identities = 332/658 (50%), Positives = 451/658 (68%)
Query: 47 NGKPYS---QRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVL 103
+G P S Q+ I R+SLPV+ +EE L + +QV+I+ GETGSGKTTQIPQ++
Sbjct: 381 SGPPLSAQAQQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLF 440
Query: 104 EGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTV 163
E + T ++ M IACTQP EM V +G EVGYSIRFEDC+S RTV
Sbjct: 441 E--EGYT---KKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTV 495
Query: 164 LKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMS 223
L+Y+TDGMLLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V S
Sbjct: 496 LRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVAS 555
Query: 224 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDIL 283
ATL+ +F +F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDIL
Sbjct: 556 ATLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDIL 615
Query: 284 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 343
VFLTG+EEIE AC + +G ++ + V+P+Y+ LP MQ +IF+
Sbjct: 616 VFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA----- 670
Query: 344 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 403
RK+VV+TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GR
Sbjct: 671 --RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGR 728
Query: 404 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 463
AGR GKCFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP
Sbjct: 729 AGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPP 788
Query: 464 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 523
ETL+ ALE L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++A
Sbjct: 789 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 848
Query: 524 MLSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNH 582
MLSV N F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV
Sbjct: 849 MLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQF 908
Query: 583 RALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ 640
R+++ A +VR+QL ++ R + L C D YV +RKA+ +GYF A L R+G
Sbjct: 909 RSMRRARDVREQLEGLLERVEVGLTSCQGD------YVRVRKAITSGYFYHTARLTRSG- 961
Query: 641 YLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
Y TVK Q V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 962 YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1019
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 1656 (588.0 bits), Expect = 2.4e-170, P = 2.4e-170
Identities = 329/650 (50%), Positives = 448/650 (68%)
Query: 52 SQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETP 111
+Q+ I R+SLPV+ +EE L + +QV+I+ GETGSGKTTQIPQ++ E + T
Sbjct: 390 AQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFE--EGYT- 446
Query: 112 DRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGM 171
++ M IACTQP EM V +G EVGYSIRFEDC+S RTVL+Y+TDGM
Sbjct: 447 --KKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGM 504
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SATL+ +F
Sbjct: 505 LLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARF 564
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
+F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EE
Sbjct: 565 STFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEE 624
Query: 292 IEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVS 351
IE AC + +G ++ + V+P+Y+ LP MQ +IF+ RK+VV+
Sbjct: 625 IEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVA 677
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GK
Sbjct: 678 TNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGK 737
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
CFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ AL
Sbjct: 738 CFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLAL 797
Query: 472 EVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC- 530
E L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N
Sbjct: 798 EQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSI 857
Query: 531 FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 590
F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R+++ A +
Sbjct: 858 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARD 917
Query: 591 VRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQ 648
VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y TVK Q
Sbjct: 918 VREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQ 970
Query: 649 VVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 971 TVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1020
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 1654 (587.3 bits), Expect = 4.0e-170, P = 4.0e-170
Identities = 328/650 (50%), Positives = 448/650 (68%)
Query: 52 SQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETP 111
+Q+ + R+SLPV+ +EE L + +QV+I+ GETGSGKTTQIPQ++ E + T
Sbjct: 387 AQQKESVQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFE--EGYT- 443
Query: 112 DRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGM 171
++ M IACTQP EM V +G EVGYSIRFEDC+S RTVL+Y+TDGM
Sbjct: 444 --KKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGM 501
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SATL+ +F
Sbjct: 502 LLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARF 561
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
+F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EE
Sbjct: 562 STFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEE 621
Query: 292 IEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVS 351
IE AC + +G ++ + V+P+Y+ LP MQ +IF+ RK+VV+
Sbjct: 622 IEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVA 674
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GK
Sbjct: 675 TNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGK 734
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
CFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ AL
Sbjct: 735 CFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLAL 794
Query: 472 EVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC- 530
E L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N
Sbjct: 795 EQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSI 854
Query: 531 FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 590
F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R+++ A +
Sbjct: 855 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARD 914
Query: 591 VRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQ 648
VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y TVK Q
Sbjct: 915 VREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQ 967
Query: 649 VVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 968 TVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1017
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 1652 (586.6 bits), Expect = 6.4e-170, P = 6.4e-170
Identities = 328/650 (50%), Positives = 448/650 (68%)
Query: 52 SQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETP 111
+Q+ I R+SLPV+ +EE L + +Q++I+ GETGSGKTTQIPQ++ E + T
Sbjct: 390 AQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFE--EGYT- 446
Query: 112 DRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGM 171
++ M IACTQP EM V +G EVGYSIRFEDC+S RTVL+Y+TDGM
Sbjct: 447 --QKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGM 504
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SATL+ +F
Sbjct: 505 LLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARF 564
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
+F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EE
Sbjct: 565 STFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEE 624
Query: 292 IEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVS 351
IE AC + +G ++ + V+P+Y+ LP MQ +IF+ RK+VV+
Sbjct: 625 IEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVA 677
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GK
Sbjct: 678 TNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGK 737
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
CFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ AL
Sbjct: 738 CFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLAL 797
Query: 472 EVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC- 530
E L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N
Sbjct: 798 EQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSI 857
Query: 531 FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 590
F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R+++ A +
Sbjct: 858 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARD 917
Query: 591 VRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQ 648
VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y TVK Q
Sbjct: 918 VREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQ 970
Query: 649 VVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 971 TVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1020
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 1652 (586.6 bits), Expect = 6.4e-170, P = 6.4e-170
Identities = 328/650 (50%), Positives = 448/650 (68%)
Query: 52 SQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETP 111
+Q+ I R+SLPV+ +EE L + +Q++I+ GETGSGKTTQIPQ++ E + T
Sbjct: 390 AQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFE--EGYT- 446
Query: 112 DRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGM 171
++ M IACTQP EM V +G EVGYSIRFEDC+S RTVL+Y+TDGM
Sbjct: 447 --QKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGM 504
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SATL+ +F
Sbjct: 505 LLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARF 564
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
+F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EE
Sbjct: 565 STFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEE 624
Query: 292 IEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVS 351
IE AC + +G ++ + V+P+Y+ LP MQ +IF+ RK+VV+
Sbjct: 625 IEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVA 677
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GK
Sbjct: 678 TNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGK 737
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
CFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ AL
Sbjct: 738 CFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLAL 797
Query: 472 EVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC- 530
E L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N
Sbjct: 798 EQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSI 857
Query: 531 FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 590
F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R+++ A +
Sbjct: 858 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARD 917
Query: 591 VRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQ 648
VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y TVK Q
Sbjct: 918 VREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQ 970
Query: 649 VVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 971 TVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1020
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 1651 (586.2 bits), Expect = 8.2e-170, P = 8.2e-170
Identities = 328/650 (50%), Positives = 447/650 (68%)
Query: 52 SQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETP 111
+Q+ I R+SLPV+ +EE L + +QV+I+ GETGSGKTTQIPQ++ E + T
Sbjct: 386 AQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFE--EGYT- 442
Query: 112 DRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGM 171
+ M IACTQP EM V +G EVGYSIRFEDC+S RTVL+Y+TDGM
Sbjct: 443 --NKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGM 500
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SAT++ +F
Sbjct: 501 LLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARF 560
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
+F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EE
Sbjct: 561 STFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEE 620
Query: 292 IEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVS 351
IE AC + +G ++ + V+P+Y+ LP MQ +IF+ RK+VV+
Sbjct: 621 IEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVA 673
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GK
Sbjct: 674 TNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGK 733
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
CFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ AL
Sbjct: 734 CFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLAL 793
Query: 472 EVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC- 530
E L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N
Sbjct: 794 EQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSI 853
Query: 531 FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 590
F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R+++ A +
Sbjct: 854 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARD 913
Query: 591 VRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQ 648
VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y TVK Q
Sbjct: 914 VREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQ 966
Query: 649 VVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 967 TVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1016
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 1641 (582.7 bits), Expect = 9.4e-169, P = 9.4e-169
Identities = 314/644 (48%), Positives = 452/644 (70%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I ++R+SLPV++ +++ L+ + NQ++I+VG+TGSGKTTQ+ Q++ E K
Sbjct: 570 IKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEA------GWANKG 623
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
+I CTQP EE+ +G EVGY+IRFEDC+S T +KY+TDGML RE +
Sbjct: 624 IIGCTQPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVL 683
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
DP L++Y VI+LDEAHERT+ATDVLFGLLK LK RPDL+L+V SATL+A+KF YFYG
Sbjct: 684 LDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYG 743
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PVEI Y++EPE DYL+AA+ TV+QIH+ EP GD+L+FLTG+EEI+ AC
Sbjct: 744 CPIFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLLFLTGQEEIDTACE 803
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+ + + +G V + ++P+YS LP MQ +IF+ RK+V++TNIAET
Sbjct: 804 ILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGG-------RKVVIATNIAET 856
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
S+TID I YVIDPGF KQK Y+P++ ++SL+V+PIS+A A QR+GRAGRT PGKCFRLYT
Sbjct: 857 SITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYT 916
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
E ++ +++ P T P+I R NL++T+L LK +GI+DL+HFDFMDPP T++ ALE L L
Sbjct: 917 EAAYQSEMLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYAL 976
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
ALDD+G LT +G KM++FP++P ++K+L+ S CS E+LSI AMLS+ + F RP+E
Sbjct: 977 SALDDEGLLTRLGRKMADFPMEPALAKVLIASVDMGCSEEMLSIVAMLSIQSVFYRPKEK 1036
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
Q+ AD+ KA+F GDHLTLLNVY+A+K++ +WCY+NF+ R ++ A +VRQQL+
Sbjct: 1037 QQQADQKKAKFHDPHGDHLTLLNVYNAWKRSGFSNAWCYENFIQARQIRRAQDVRQQLLG 1096
Query: 598 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC 657
IM R++ K+ S N+ +R+A+ G+F A + Y T+ + V++HPS+
Sbjct: 1097 IMQRYHHKIVSCGRNT----TKVRQALCTGFFRNSARKDPQEGYKTLVEGTPVYMHPSSA 1152
Query: 658 LDHKP-EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 700
+ KP E VIY+ VLT++ ++ T + +WL++ AP ++ ++
Sbjct: 1153 MFGKPAEHVIYHTLVLTTKEYMHCTTGIEPKWLVEAAPTFFKVA 1196
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 1639 (582.0 bits), Expect = 1.5e-168, P = 1.5e-168
Identities = 322/676 (47%), Positives = 460/676 (68%)
Query: 35 MMNNNNSLINRWNGK--PYSQRYYE-----ILEKRKSLPVWQQKEEFLQVLKANQVIILV 87
M N + + W P +Q + + I ++R+SLPV+ +E+ ++ +K NQ++I+V
Sbjct: 505 MQNRPSEAVPEWRQAIAPKNQSFGKRTNMTIKQQRESLPVFAFREQLIKAVKENQIMIVV 564
Query: 88 GETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE 147
GETGSGKTTQ+ Q++ E + +I CTQP EE+ +G+E
Sbjct: 565 GETGSGKTTQLTQYLAEA------GFANEGVIGCTQPRRVAAMSVAKRVSEEVGCELGQE 618
Query: 148 VGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLL 207
VGY+IRFEDC+S T +KY+TDGML RE + DP L+RY VI+LDEAHERT+ATDVLF LL
Sbjct: 619 VGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDLKRYSVIMLDEAHERTIATDVLFALL 678
Query: 208 KEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAI 267
K+ + RPDLK++V SATL+A+KF YF P+ +PGR PVEI Y+++PE DYL+AA+
Sbjct: 679 KKATRRRPDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILYSKDPESDYLDAAL 738
Query: 268 RTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQ 327
TV+QIH+ EP GDIL+FLTG+EEI+ +C + + + +G V + ++P+YS LP MQ
Sbjct: 739 TTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNEMQ 798
Query: 328 QKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESL 387
+IF+ RK+V++TNIAETS+TID I YV+DPGF KQ Y+P++ ++SL
Sbjct: 799 SRIFDPAPPGS-------RKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSL 851
Query: 388 LVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKK 447
+V+PIS+A A+QR+GRAGRT PGKCFRLYTE ++ ++ P + PEI R NL+NT+L LK
Sbjct: 852 VVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKA 911
Query: 448 LGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLV 507
+GI+DL+HFDFMDPP T++ ALE L L ALDD+G LT +G KM++FP++P +SK+L+
Sbjct: 912 MGINDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLI 971
Query: 508 ESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ 567
S + CS+E+LSI AML++PN F RP+E Q AD KA+F +GDHLTLLNVY+A+KQ
Sbjct: 972 ASVEMRCSDEMLSIVAMLNLPNVFYRPKEKQTQADAKKAKFHDPNGDHLTLLNVYNAWKQ 1031
Query: 568 NNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAML 625
+ WC +NF+ RAL A +VR Q+ RIM RF ++ C +D N +R+A+
Sbjct: 1032 SRYSKPWCAENFIQFRALTRARDVRNQIERIMQRFKYQVMSCGSDTN------RVRQALC 1085
Query: 626 AGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDV 684
+G+F A ++ Y T+ + V+LHPS+ L K EWVIY+ VLT++ ++ T +
Sbjct: 1086 SGFFRNAARKDQQEGYRTLIEGTPVYLHPSSALFGKHAEWVIYHTLVLTTKEYMHCTTSI 1145
Query: 685 RGEWLIDIAPHYYDLS 700
+WL+D AP ++ +S
Sbjct: 1146 EPKWLVDAAPTFFKVS 1161
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1632 (579.6 bits), Expect = 8.5e-168, P = 8.5e-168
Identities = 317/658 (48%), Positives = 458/658 (69%)
Query: 48 GKP-YSQRY-YEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLE- 104
GK Y +R ++E+R+SLP++ K+ ++ + NQ++++VGETGSGKTTQ+ Q+ +E
Sbjct: 521 GKATYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEA 580
Query: 105 GVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVL 164
G+ RR K I CTQP EE +G +VGY+IRFEDC+S T++
Sbjct: 581 GLG-----RRGK--IGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTII 633
Query: 165 KYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 224
KY+TDGMLLRE + DP L Y +I+LDEAHERT+ TDVLFGLLK + RP+LKL++ SA
Sbjct: 634 KYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSA 693
Query: 225 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 284
TL++ KF YF AP+ +PGR PVEI YT+EPE DYLEAA TV+QIH+ EP GD+LV
Sbjct: 694 TLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLV 753
Query: 285 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 344
FLTG+EEI+ +C + + + +MG V + ++P+Y LP MQ +IF+
Sbjct: 754 FLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK------ 807
Query: 345 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 404
RK+V++TNIAETSLTIDGI YV+DPGF KQK+YNP+ ++SL+V+PIS+A+A QRSGRA
Sbjct: 808 -RKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRA 866
Query: 405 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 464
GRT PGKC+RLYTE++F +++ P PEI R+NLA+T+L LK +GI++L+ FDFMD P
Sbjct: 867 GRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPL 926
Query: 465 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 524
++++ AL L+ L ALD DG LT++G +M+EFPL+P +SK+L+ S CS E+L+I AM
Sbjct: 927 DSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAM 986
Query: 525 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 584
L+V N F RP+E Q AD+ KA+F +GDHLTLL VY+++K ++ WC++NF+ R+
Sbjct: 987 LNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRS 1046
Query: 585 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 644
+K A ++R+QL+ IM R L + S RD ++KA+ +G+F A + Y T+
Sbjct: 1047 MKRAQDIRKQLLGIMDRHKLLMVSC---GRDVS-RVQKAICSGFFRNAAKRDPQEGYRTL 1102
Query: 645 KDNQVVHLHPSN-CLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
D Q V++HPS+ C +PEWV+Y+E V+T++ ++R VT + +WL++ AP ++ + +
Sbjct: 1103 TDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1632 (579.6 bits), Expect = 8.5e-168, P = 8.5e-168
Identities = 317/658 (48%), Positives = 458/658 (69%)
Query: 48 GKP-YSQRY-YEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLE- 104
GK Y +R ++E+R+SLP++ K+ ++ + NQ++++VGETGSGKTTQ+ Q+ +E
Sbjct: 521 GKATYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEA 580
Query: 105 GVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVL 164
G+ RR K I CTQP EE +G +VGY+IRFEDC+S T++
Sbjct: 581 GLG-----RRGK--IGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTII 633
Query: 165 KYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 224
KY+TDGMLLRE + DP L Y +I+LDEAHERT+ TDVLFGLLK + RP+LKL++ SA
Sbjct: 634 KYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSA 693
Query: 225 TLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV 284
TL++ KF YF AP+ +PGR PVEI YT+EPE DYLEAA TV+QIH+ EP GD+LV
Sbjct: 694 TLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLV 753
Query: 285 FLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 344
FLTG+EEI+ +C + + + +MG V + ++P+Y LP MQ +IF+
Sbjct: 754 FLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK------ 807
Query: 345 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 404
RK+V++TNIAETSLTIDGI YV+DPGF KQK+YNP+ ++SL+V+PIS+A+A QRSGRA
Sbjct: 808 -RKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRA 866
Query: 405 GRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 464
GRT PGKC+RLYTE++F +++ P PEI R+NLA+T+L LK +GI++L+ FDFMD P
Sbjct: 867 GRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPL 926
Query: 465 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 524
++++ AL L+ L ALD DG LT++G +M+EFPL+P +SK+L+ S CS E+L+I AM
Sbjct: 927 DSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAM 986
Query: 525 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRA 584
L+V N F RP+E Q AD+ KA+F +GDHLTLL VY+++K ++ WC++NF+ R+
Sbjct: 987 LNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRS 1046
Query: 585 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTV 644
+K A ++R+QL+ IM R L + S RD ++KA+ +G+F A + Y T+
Sbjct: 1047 MKRAQDIRKQLLGIMDRHKLLMVSC---GRDVS-RVQKAICSGFFRNAAKRDPQEGYRTL 1102
Query: 645 KDNQVVHLHPSN-CLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
D Q V++HPS+ C +PEWV+Y+E V+T++ ++R VT + +WL++ AP ++ + +
Sbjct: 1103 TDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 1627 (577.8 bits), Expect = 2.9e-167, P = 2.9e-167
Identities = 323/702 (46%), Positives = 467/702 (66%)
Query: 4 ERKRKVSLFDVVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYE-----I 58
E K + L D + +TS + VK + + P + S I++W ++ + + I
Sbjct: 278 EEKMQSELSDPLFQTS---EPVKNSDLDP-----DTESFISKWKKSNKTETFGKRTSLPI 329
Query: 59 LEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMM 118
E+R+ LPV+ + + L+ ++ NQ +++VGETGSGKTTQI Q++ E + + K+
Sbjct: 330 QEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEE-GMNKVGGQTKL- 387
Query: 119 IACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMT 178
I CTQP EE+ +G+ VGY+IRFED +S TV+KY+TDGML REA+
Sbjct: 388 IGCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALN 447
Query: 179 DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGA 238
DP + RY VI+LDEAHERT+ATDVLF LLK K P+LK++V SATL++ KF YF
Sbjct: 448 DPNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNC 507
Query: 239 PLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRK 298
P++ +PGR PVE+ YT+ PE DYL AA+ +V+QIH+ EP+GDILVFLTG+EEIE +C
Sbjct: 508 PIITIPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPAGDILVFLTGQEEIETSCEA 567
Query: 299 ITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETS 358
+ + + +G+ + + ++P+YS LP MQ +IFE RK++++TNIAETS
Sbjct: 568 LHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGS-------RKVILATNIAETS 620
Query: 359 LTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTE 418
+TIDGI YV+DPGF K +Y+ ++ ++SL V+PISKA A+QRSGRAGRT PGKC+RLYTE
Sbjct: 621 ITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRAGRTGPGKCYRLYTE 680
Query: 419 KSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLG 478
+++ ++ P T PEI R NL++T+L LK +GI DLV+F+FMDPP+ T++ ALE L L
Sbjct: 681 QAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPSTTTMLTALEDLYILD 740
Query: 479 ALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQ 538
ALDDDGNLT +G KM++ P++P ++K L++S +Y C+ EILSI AMLSV F RP++ Q
Sbjct: 741 ALDDDGNLTTLGRKMADLPMEPALAKTLIQSVEYECTEEILSIVAMLSVQTIFYRPKDKQ 800
Query: 539 KAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRI 598
AD+ K+RF H GDHLTLLNV+ ++ +NN +WC DNF+ R+++ A VR+QL I
Sbjct: 801 ALADQRKSRFHHSLGDHLTLLNVFQSWCRNNYSKTWCRDNFIQERSMRRAMEVRKQLKSI 860
Query: 599 MARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSN 656
M RF K C ND + +R+ +GYF A + Y T+ +N +V+LHPS+
Sbjct: 861 MQRFGYKTMSCGNDVD------RVRRTFCSGYFKNSAKRQEGEGYKTLNENTLVYLHPSS 914
Query: 657 CL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
L KP++VIY+ +LTS+ ++ V+ + WL ++AP Y+
Sbjct: 915 SLYGKKPQYVIYHTLLLTSKEYMHCVSIIDPNWLYELAPKYF 956
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1609 (571.5 bits), Expect = 2.3e-165, P = 2.3e-165
Identities = 322/643 (50%), Positives = 440/643 (68%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E RKSLPV+ ++ F++ +K +QV+I+ GETGSGKTTQ+PQ++ E E R
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKR---- 412
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQP +E+ +G +VGYSIRFEDC+S +TVLKY+TDGMLLRE +
Sbjct: 413 -IGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFL 471
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+P L Y V+++DEAHERTL TD+LFGL+K++ + R DLKL++ SATL+AEKF +F
Sbjct: 472 NEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDD 531
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDILVFLTGEEEIEDAC 296
AP+ ++PGR PV+I+YTQ PE DY++AAI T++QIH+ +P GDILVFLTG+EEIE
Sbjct: 532 APIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQ 591
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAE 356
+ + +G ++ + +P+Y+ LP +Q KIFE RK+V++TNIAE
Sbjct: 592 EALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA-------RKVVLATNIAE 644
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TS+TIDGI YVIDPGF+KQ ++ R VE L V ISKA+A+QR+GRAGRT PGKCFRLY
Sbjct: 645 TSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLY 704
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
T ++ ++L+ Q PEI R+NL N VL LK LGI DLVHFDF+DPP ETL+ ALE L
Sbjct: 705 TAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYA 764
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPR 535
LGAL+ G LT++G +M+EFP DP MSKM++ S KY CS EI++I+AMLS F RP+
Sbjct: 765 LGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPK 824
Query: 536 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQL 595
AD A+ F GDH+TL+NVY+ +++++ WC +N+V HR +K A +VR QL
Sbjct: 825 AQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQL 884
Query: 596 VRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
V ++ R ++ S S D + IRKA+ AGYF V+ L+ TG Y TVK H HP+
Sbjct: 885 VGLLERVEIETKS----STDT-IKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPN 939
Query: 656 NCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
+CL + P WV+Y E V TS+ F+R ++++ WL+++APHYY
Sbjct: 940 SCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYY 982
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1609 (571.5 bits), Expect = 2.3e-165, P = 2.3e-165
Identities = 322/643 (50%), Positives = 440/643 (68%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E RKSLPV+ ++ F++ +K +QV+I+ GETGSGKTTQ+PQ++ E E R
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKR---- 412
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQP +E+ +G +VGYSIRFEDC+S +TVLKY+TDGMLLRE +
Sbjct: 413 -IGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFL 471
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+P L Y V+++DEAHERTL TD+LFGL+K++ + R DLKL++ SATL+AEKF +F
Sbjct: 472 NEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDD 531
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDILVFLTGEEEIEDAC 296
AP+ ++PGR PV+I+YTQ PE DY++AAI T++QIH+ +P GDILVFLTG+EEIE
Sbjct: 532 APIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQ 591
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAE 356
+ + +G ++ + +P+Y+ LP +Q KIFE RK+V++TNIAE
Sbjct: 592 EALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA-------RKVVLATNIAE 644
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TS+TIDGI YVIDPGF+KQ ++ R VE L V ISKA+A+QR+GRAGRT PGKCFRLY
Sbjct: 645 TSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLY 704
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
T ++ ++L+ Q PEI R+NL N VL LK LGI DLVHFDF+DPP ETL+ ALE L
Sbjct: 705 TAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYA 764
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPR 535
LGAL+ G LT++G +M+EFP DP MSKM++ S KY CS EI++I+AMLS F RP+
Sbjct: 765 LGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPK 824
Query: 536 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQL 595
AD A+ F GDH+TL+NVY+ +++++ WC +N+V HR +K A +VR QL
Sbjct: 825 AQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQL 884
Query: 596 VRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
V ++ R ++ S S D + IRKA+ AGYF V+ L+ TG Y TVK H HP+
Sbjct: 885 VGLLERVEIETKS----STDT-IKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPN 939
Query: 656 NCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
+CL + P WV+Y E V TS+ F+R ++++ WL+++APHYY
Sbjct: 940 SCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYY 982
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 1605 (570.0 bits), Expect = 6.2e-165, P = 6.2e-165
Identities = 315/648 (48%), Positives = 450/648 (69%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIAC 121
RKSLPV+Q K++ L+ + QV+++V ETGSGKTTQ+PQF+ E T ++ I C
Sbjct: 415 RKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAG--YTKGNKK---ICC 469
Query: 122 TQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
TQP +EMDV +G+EVGYSIRFE+ +S +TV+KYLTDGMLLRE +T+P
Sbjct: 470 TQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPD 529
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLM 241
L Y VI++DEAHERTL TD+LFGL+K++ + RPDLK+++ SAT++AEKF YF AP+
Sbjct: 530 LASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVF 589
Query: 242 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITK 301
VPGR +PV+I+YT +PE +Y++AAI T++QIH +P+GDILVFLTG++EIE + +
Sbjct: 590 YVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQE 649
Query: 302 EITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTI 361
+G ++ + + P+Y+ LP +Q KIF+ RK+V++TNIAETS+TI
Sbjct: 650 LCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGA-------RKVVLATNIAETSITI 702
Query: 362 DGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSF 421
DG+ +VID GF KQ +YNPR +ESL+ P S+ASA QR+GRAGR PGKCFRLYT +++
Sbjct: 703 DGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTY 762
Query: 422 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 481
NN+L T PEI R+NL N VL LK LGI++L+ FDFMD P PETLMR+LE+L LGAL+
Sbjct: 763 NNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALN 822
Query: 482 DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS-VPNCFVRPREAQKA 540
+ G LT++G +M+EFP DP +SK L+ S KY C E+LSI +ML + F RP++
Sbjct: 823 NRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIME 882
Query: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMA 600
AD+A+A F GDHLTLL++++ + + +W +NF+ +++L A +VR QL +
Sbjct: 883 ADKARANFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCE 942
Query: 601 RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ-YLTVKDNQVVHLHPSNCL- 658
R ++L +N S D I+KA+ AGYF A L+R+G Y TVK NQ V++HPS+ +
Sbjct: 943 RVEIELVTNSSESLD---PIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVA 999
Query: 659 DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCE 706
+ KP+ +IY E VLT++ + R +T+++ EWL++I+PHY+ N + +
Sbjct: 1000 EKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFKPENIEELQ 1047
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 1579 (560.9 bits), Expect = 8.3e-164, Sum P(2) = 8.3e-164
Identities = 311/619 (50%), Positives = 434/619 (70%)
Query: 47 NGKPYSQR-YYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG 105
N Y ++ ILE+R+SLP+++ KE+ +Q + NQ++I++GETGSGKTTQI Q++ E
Sbjct: 546 NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 605
Query: 106 VDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLK 165
R K I CTQP EE +G+EVGY+IRFEDC+S TV+K
Sbjct: 606 GYTS----RGK--IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIK 659
Query: 166 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
Y+TDGMLLRE + DP L +Y +I+LDEAHERT+ TDVLFGLLK+ ++ R D+KL+V SAT
Sbjct: 660 YMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSAT 719
Query: 226 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 285
L+A KF YFY AP+ +PGR +PVEI YT+EPE DYL+A++ TV+QIH+ EP GDILVF
Sbjct: 720 LDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVF 779
Query: 286 LTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
LTG+EEI+ AC + + + ++G V + ++P+YS LP MQ +IF+
Sbjct: 780 LTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS------- 832
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK+V++TNIAETSLTIDGI YV+DPGF KQKVYN + ++ L+V+PIS+A A QR+GRAG
Sbjct: 833 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 892
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT PGKC+RLYTE+++ +++ PEI R+NLA+TVL+LK +GI+DL+ FDFMD P E
Sbjct: 893 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 952
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
TL+ A+E L LGALDD+G LT +G +M+EFPL+P + KML+ S CS E+L+I +ML
Sbjct: 953 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSML 1012
Query: 526 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 585
SV N F RP++ Q AD+ KA+F +GDHLTLL VY+++K N WCY+NF+ R+L
Sbjct: 1013 SVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSL 1072
Query: 586 KSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVK 645
+ A ++R+Q++ IM R L + S ++ V ++KA+ +G+F A + Y T+
Sbjct: 1073 RRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFFRNAAKKDPQEGYRTLI 1128
Query: 646 DNQVVHLHPSNCL-DHKPE 663
D QVV++HPS+ L + +PE
Sbjct: 1129 DQQVVYIHPSSALFNRQPE 1147
Score = 37 (18.1 bits), Expect = 8.3e-164, Sum P(2) = 8.3e-164
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 87 VGETGSGKTTQIPQF 101
+G+ +GK T I QF
Sbjct: 264 IGDIYNGKVTSIMQF 278
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 1589 (564.4 bits), Expect = 3.1e-163, P = 3.1e-163
Identities = 317/649 (48%), Positives = 448/649 (69%)
Query: 53 QRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPD 112
Q+ I + RK LP++Q +++ +Q + +QV+I+VGETGSGKTTQ+PQ++ E
Sbjct: 469 QKAQTIEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEA-----GY 523
Query: 113 RRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGML 172
+ M + CTQP EEM V +G EVGYSIRFED +S +TVLKY+TDGML
Sbjct: 524 TKNGMKVGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGML 583
Query: 173 LREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQ 232
LRE +T+P L +Y +++DEAHERT+ TD+ GLLK++ K RPDLKL++ SAT++A+KFQ
Sbjct: 584 LRELLTEPDLGQYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQ 643
Query: 233 GYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
YF AP+ +PGR++ V+I YTQ+PE +YL AAI TV QIH+ + GDILVFLTG+EEI
Sbjct: 644 SYFDNAPIFNIPGRMYNVDIHYTQQPEANYLAAAITTVFQIHVSQGPGDILVFLTGQEEI 703
Query: 293 EDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVST 352
E A + + + +G+++ + + P+Y+ LP +Q KIFE RK+V++T
Sbjct: 704 EAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKA-------RKVVLAT 756
Query: 353 NIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKC 412
NIAETSLTIDGIVYVIDPGF K+ V+NPR +ESL+V+P S+ASA+QR+GRAGR PGKC
Sbjct: 757 NIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKC 816
Query: 413 FRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALE 472
FRLYT+ ++ N+L+ T PEI R+NL++ +L LK LGID L+ FDFMDPP ET++RALE
Sbjct: 817 FRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRALE 876
Query: 473 VLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-F 531
L LGAL+D G LT++G +M+EFP DP ++K ++ + K+ C E+LSI +ML + F
Sbjct: 877 QLYALGALNDRGELTKIGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIVSMLGEASALF 936
Query: 532 VRPREAQKAADEAKARFGHIDG-DHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 590
RP++ + AD A+ RF DG DHLTLLN+++ + ++ W +NF+ R+L A +
Sbjct: 937 FRPKDKKIHADSARNRFTVKDGGDHLTLLNIWNQWVDSDFSYVWAKENFLQQRSLTRARD 996
Query: 591 VRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ-YLTVKDNQV 649
VR QL ++ R + + S N+ V I+KA+ AG+F A L+R G Y T+K Q
Sbjct: 997 VRDQLAKLCDRVEVTVSSCGSNN---IVPIQKAITAGFFPNAARLQRGGDSYRTIKTGQT 1053
Query: 650 VHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
V+LHPS+ L + P WVIY E VLTS+ ++R+ ++ EWL+++APHYY
Sbjct: 1054 VYLHPSSTLFEVNPRWVIYFELVLTSKEYMRSNMPLQAEWLVEVAPHYY 1102
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1561 (554.6 bits), Expect = 2.8e-160, P = 2.8e-160
Identities = 304/643 (47%), Positives = 444/643 (69%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E+R LP++ K + ++ ++ N V+I++GETGSGKTTQIPQ++ E E K
Sbjct: 624 INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTE------KG 677
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
++ CTQP EE +G+EVGYSIRF+DC+S T++KYLTDGMLLRE +
Sbjct: 678 IVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETL 737
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+D LL +Y I+LDEAHERT++TD+LF LLK+V++ R D KL+V SATL+AEKF YF+
Sbjct: 738 SDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFN 797
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
+P+ +PG++ PVEI +++EPE DY+EA++ TV+ IH+ E GDILVFLTG++EI AC
Sbjct: 798 SPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACE 857
Query: 298 KITKEITNMGDQVGPVKVV-PLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAE 356
+ + + + P ++ P+YS+LP MQ IFE RK +++TNIAE
Sbjct: 858 ILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGC-------RKCILATNIAE 910
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
SLTIDGI +VIDPGF K K Y+ + ++SL+V+PISKA+A QR+GRAGRT PGKC+RLY
Sbjct: 911 ASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLY 970
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
TE+++ N++ + PEI R NL + VL LK LGI+D +HFDFMD P+ ETL+ +LE L Y
Sbjct: 971 TEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYY 1030
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
LGALDD+G LT++G+KM+ FP++P +SK+L+ S +NC++++++I +MLSV N F RP+
Sbjct: 1031 LGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQN 1090
Query: 537 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLV 596
AD+ K +F GD +T LN+Y+ +K+N+ WC++NF+ RALK A +VR+Q++
Sbjct: 1091 KALLADKKKNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQML 1150
Query: 597 RIMARFNLKLC-SNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
I ++N ++ S N YVNI K++ +GYF V + Y T+ NQ V +HPS
Sbjct: 1151 SIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPS 1210
Query: 656 NCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
+ L +K P +V+Y+E VLT++ +IR T ++ +WLI +AP+ +
Sbjct: 1211 STLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLF 1253
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1561 (554.6 bits), Expect = 2.8e-160, P = 2.8e-160
Identities = 304/643 (47%), Positives = 444/643 (69%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E+R LP++ K + ++ ++ N V+I++GETGSGKTTQIPQ++ E E K
Sbjct: 624 INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTE------KG 677
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
++ CTQP EE +G+EVGYSIRF+DC+S T++KYLTDGMLLRE +
Sbjct: 678 IVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETL 737
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+D LL +Y I+LDEAHERT++TD+LF LLK+V++ R D KL+V SATL+AEKF YF+
Sbjct: 738 SDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFN 797
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
+P+ +PG++ PVEI +++EPE DY+EA++ TV+ IH+ E GDILVFLTG++EI AC
Sbjct: 798 SPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACE 857
Query: 298 KITKEITNMGDQVGPVKVV-PLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAE 356
+ + + + P ++ P+YS+LP MQ IFE RK +++TNIAE
Sbjct: 858 ILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGC-------RKCILATNIAE 910
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
SLTIDGI +VIDPGF K K Y+ + ++SL+V+PISKA+A QR+GRAGRT PGKC+RLY
Sbjct: 911 ASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLY 970
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
TE+++ N++ + PEI R NL + VL LK LGI+D +HFDFMD P+ ETL+ +LE L Y
Sbjct: 971 TEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYY 1030
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
LGALDD+G LT++G+KM+ FP++P +SK+L+ S +NC++++++I +MLSV N F RP+
Sbjct: 1031 LGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQN 1090
Query: 537 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLV 596
AD+ K +F GD +T LN+Y+ +K+N+ WC++NF+ RALK A +VR+Q++
Sbjct: 1091 KALLADKKKNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQML 1150
Query: 597 RIMARFNLKLC-SNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
I ++N ++ S N YVNI K++ +GYF V + Y T+ NQ V +HPS
Sbjct: 1151 SIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPS 1210
Query: 656 NCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
+ L +K P +V+Y+E VLT++ +IR T ++ +WLI +AP+ +
Sbjct: 1211 STLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLF 1253
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 1536 (545.8 bits), Expect = 2.3e-159, Sum P(2) = 2.3e-159
Identities = 310/657 (47%), Positives = 429/657 (65%)
Query: 44 NRWNGK-PYSQRY-YEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQF 101
NR N Y +R I +R++LPV+ + E +Q ++ NQ +++VGETGSGKTTQI Q+
Sbjct: 460 NRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQY 519
Query: 102 VLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSAR 161
+ D E MI CTQP EE+ +G +VGY+IRFED +
Sbjct: 520 L----DEEGFSNYG--MIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPD 573
Query: 162 TVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVV 221
T +KY+TDGML REA+ DP + +Y VI+LDEAHERT+ATDVLF LLK+ RP+LK++V
Sbjct: 574 TRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIV 633
Query: 222 MSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGD 281
SATL + KF YF P++ +PG+ PVE+ Y+Q P+ DY+EAA+ V+ IH+ E GD
Sbjct: 634 TSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGD 693
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
ILVFLTG+EEI+ C + + +GD +G + ++P+YS LP +Q KIFE
Sbjct: 694 ILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGS--- 750
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK+V +TNIAETS+TIDGI YV+DPGFAK +YN R +E L+VSPIS+A A+QR
Sbjct: 751 ----RKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRK 806
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT PGKC+RLYTE +F N++ T PEI R NL++T+L LK +GI+DL+ FDFMDP
Sbjct: 807 GRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDP 866
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
P ++ AL L +L +LDD+G LT +G++MS FP+DP +S+ L+ S CS+EI++I
Sbjct: 867 PPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTI 926
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVN 581
+MLSV N F RP++ Q AD KA+F H GDHLTLLNVY ++Q N +C NF++
Sbjct: 927 ISMLSVQNVFYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLH 986
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 641
R LK A +V+ Q+ I + LKL S + D IRK ++G+FM A + Y
Sbjct: 987 FRHLKRARDVKSQISMIFKKIGLKLISCH-SDPDL---IRKTFVSGFFMNAAKRDSQVGY 1042
Query: 642 LTVKDNQVVHLHPSNCLDHKP-EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
T+ V +HPS+ L K E+V+Y+ VLTSR ++ VT + +WL+++APH+Y
Sbjct: 1043 KTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFY 1099
Score = 38 (18.4 bits), Expect = 2.3e-159, Sum P(2) = 2.3e-159
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGS 92
IL K KS+ +Q++ +Q N+ I + + S
Sbjct: 103 ILNKSKSITEFQEQLNLMQSGLDNETIFKIYQIAS 137
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 1504 (534.5 bits), Expect = 3.1e-154, P = 3.1e-154
Identities = 285/646 (44%), Positives = 438/646 (67%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E+R+ LP++ + + +++++ N VII+VGETGSGKTTQ+ Q++ E D K
Sbjct: 652 IKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYE-------DGYSKF 704
Query: 118 -MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
I CTQP EEM VT+G EVGYSIRFEDC+S T +KY+TDG+LLRE+
Sbjct: 705 GKIGCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRES 764
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 236
DP L++Y I++DEAHER+L TDVLFG+LK+V+ R D+KL+V SAT++++KF +F
Sbjct: 765 FNDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFFG 824
Query: 237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDAC 296
P+ +PGR PV++ +++ P DY+++A++ ++ IH+ + GDILVF+TG+E+IE C
Sbjct: 825 DVPVFTIPGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILVFMTGQEDIETTC 884
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAE 356
+ + I +G Q P+ ++P+YS LP MQ KIFE RK +++TNIAE
Sbjct: 885 ATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGS-------RKCIIATNIAE 937
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TSLT+DGI+YVID G+ K KVYNPRV ++SL V+PISKA+A+QRSGRAGRT PG+C+RLY
Sbjct: 938 TSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYRLY 997
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
TE +F +L PEI R+NL N VL LK +G+ +L+ FDFMDPP + ++ ++ L
Sbjct: 998 TESAFKYELMDNNIPEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQDNILNSMYQLWV 1057
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
LGALDD G +T +G++MSEFPLDP +SKM++ + + C +I++I +MLS+P+ F RP+
Sbjct: 1058 LGALDDQGQITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSMLSMPSVFYRPKG 1117
Query: 537 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLV 596
A++ +D ++ +F + DHLTLL+VY +K NN WC +++++ +A++ VR QL+
Sbjct: 1118 AEEESDASREKFFVPESDHLTLLHVYQQWKINNYSSQWCAEHYIHIKAMRKVREVRGQLL 1177
Query: 597 RIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSN 656
IM + ++K+ S N + IRKA+ + YF A ++ G+Y+ +++ LHP++
Sbjct: 1178 DIMVQHDMKVESCGSN----WDIIRKAITSSYFHHSAKIKGIGEYVNMRNGMPCFLHPTS 1233
Query: 657 CL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
L + P++++Y+E V+TS+ +++ VT V WL ++ P ++ +
Sbjct: 1234 ALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNWLAEMGPMFFSI 1279
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 1500 (533.1 bits), Expect = 8.2e-154, P = 8.2e-154
Identities = 304/662 (45%), Positives = 434/662 (65%)
Query: 53 QRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPD 112
+R + E RKSLP++ ++EFL L+ Q++++VGETGSGKTTQ+PQ++ E T D
Sbjct: 361 KRQLSMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAG--YTKD 418
Query: 113 RRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGML 172
R + CTQP +EM V +G EVGYSIRFED +S +T+LKY+TDGML
Sbjct: 419 GMR---VGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGML 475
Query: 173 LREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQ 232
LRE MT+P L Y +++DEAHERT+ TD+L L+K++ + R DLKL++ SAT+ AEKF
Sbjct: 476 LREFMTEPDLSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFA 535
Query: 233 GYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
YF AP+ +PGR +PV+I+YT PE +YL AAI TV QIH +P GDIL+FLTG++EI
Sbjct: 536 SYFDDAPIFNIPGRRYPVDIYYTPAPEANYLSAAITTVFQIHTTQPKGDILIFLTGQDEI 595
Query: 293 EDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVST 352
E A +IT+ +G +V + + P+Y+ LP +Q KIFE RK+V++T
Sbjct: 596 EAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENA-------RKVVLAT 648
Query: 353 NIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKC 412
NIAETSLTIDGIVYVIDPG+ K+ VYNP + +L+V P S+ASA+QRSGRAGR PGKC
Sbjct: 649 NIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKC 708
Query: 413 FRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALE 472
FRLYT+ ++ N+++ T PEI R+NL VL LK LGI++L+ F+FMDPP E L+ AL
Sbjct: 709 FRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALN 768
Query: 473 VLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-F 531
L L L+ G LT++G +M+EFP DP ++K ++ + K C E+LSI AMLS + F
Sbjct: 769 QLFALQGLNHKGELTKLGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALF 828
Query: 532 VRPREAQKAADEAKARFGHIDG-DHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 590
RP++ Q AD A+ RF +G DH+TLLN+++ + ++ P W +NF+ R+L A +
Sbjct: 829 FRPKDKQVHADAARGRFTVKEGGDHVTLLNIWNQWLDSDYSPIWSKENFLQQRSLTRARD 888
Query: 591 VRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ-YLTVKDN 647
VR+QL ++ R + L C N I++A+ AG+F A ++R+G Y TVK+N
Sbjct: 889 VREQLSKLCERVEVTLSTCGGISNMPP----IKRAITAGFFPNAARMQRSGDSYRTVKNN 944
Query: 648 QVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQ 704
V++HPS+ + D P VIY E V T++ ++R+ + +WL ++APH++ +
Sbjct: 945 TTVYIHPSSVMMQEDPPPRMVIYYELVQTTKEYMRSCMPIEPKWLAELAPHFHKAKDIAA 1004
Query: 705 CE 706
E
Sbjct: 1005 LE 1006
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1494 (531.0 bits), Expect = 3.6e-153, P = 3.6e-153
Identities = 293/651 (45%), Positives = 432/651 (66%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I ++R+ LPV+ +++ + V++ N V+I+VGETGSGKTTQ+ Q++LE ++
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG------ 487
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
+I CTQP +EM V +G++VGY+IRFEDC+S +T++KY+TDG+LLRE +
Sbjct: 488 LIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECL 547
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
D L++Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++A+KF +F G
Sbjct: 548 GDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGG 607
Query: 238 -APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDAC 296
P +PGR PVE+F+ + P DY++AA++ V IH+ GDIL+F+ G+E+IE C
Sbjct: 608 NCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTC 667
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAE 356
I +++ + D+ P+ V+P+YS LP +Q KIF+ RK +V+TNIAE
Sbjct: 668 EMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGM-------RKAIVATNIAE 719
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TSLT+DGI++VIDPGF K KVYNPR+ +++L + P+S+ASA+QR+GRAGRT PG+C+RLY
Sbjct: 720 TSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLY 779
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
TE+ F ++L T PEI R+NLAN VL LK LG+DDL+ F FMD P + ++ ++ L
Sbjct: 780 TERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWT 839
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
LGALD+ G LT MG KM EFPLDP +SKML+ S + CS+E+L+I +MLSVP F RP+
Sbjct: 840 LGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKG 899
Query: 537 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLV 596
++ AD K +F + DHLT LNVY ++ + WC DN+++ +ALK VR QL
Sbjct: 900 REEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLK 959
Query: 597 RIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSN 656
IM L L SN ++ + +RK + + YF A L+ G+Y+ V+ LHP++
Sbjct: 960 EIMQDLKLPLISN---GSEWDI-VRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTS 1015
Query: 657 CL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQ 704
L P++V+Y+E ++T++ +++ VT V WL ++ P +Y + Q
Sbjct: 1016 ALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQ 1066
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1494 (531.0 bits), Expect = 3.6e-153, P = 3.6e-153
Identities = 293/651 (45%), Positives = 432/651 (66%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I ++R+ LPV+ +++ + V++ N V+I+VGETGSGKTTQ+ Q++LE ++
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG------ 487
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
+I CTQP +EM V +G++VGY+IRFEDC+S +T++KY+TDG+LLRE +
Sbjct: 488 LIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECL 547
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
D L++Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++A+KF +F G
Sbjct: 548 GDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGG 607
Query: 238 -APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDAC 296
P +PGR PVE+F+ + P DY++AA++ V IH+ GDIL+F+ G+E+IE C
Sbjct: 608 NCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTC 667
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAE 356
I +++ + D+ P+ V+P+YS LP +Q KIF+ RK +V+TNIAE
Sbjct: 668 EMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGM-------RKAIVATNIAE 719
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TSLT+DGI++VIDPGF K KVYNPR+ +++L + P+S+ASA+QR+GRAGRT PG+C+RLY
Sbjct: 720 TSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLY 779
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
TE+ F ++L T PEI R+NLAN VL LK LG+DDL+ F FMD P + ++ ++ L
Sbjct: 780 TERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWT 839
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
LGALD+ G LT MG KM EFPLDP +SKML+ S + CS+E+L+I +MLSVP F RP+
Sbjct: 840 LGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKG 899
Query: 537 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLV 596
++ AD K +F + DHLT LNVY ++ + WC DN+++ +ALK VR QL
Sbjct: 900 REEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLK 959
Query: 597 RIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSN 656
IM L L SN ++ + +RK + + YF A L+ G+Y+ V+ LHP++
Sbjct: 960 EIMQDLKLPLISN---GSEWDI-VRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTS 1015
Query: 657 CL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQ 704
L P++V+Y+E ++T++ +++ VT V WL ++ P +Y + Q
Sbjct: 1016 ALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQ 1066
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 1491 (529.9 bits), Expect = 7.4e-153, P = 7.4e-153
Identities = 293/647 (45%), Positives = 431/647 (66%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
ILE+R+ LP++ ++E L +++ N ++I+VGETGSGKTTQ+ Q++ E D T D
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHE--DGYT-DYG--- 578
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQP EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++
Sbjct: 579 MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESL 638
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++AEKF +F
Sbjct: 639 READLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGN 698
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE
Sbjct: 699 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 758
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+I + + + + + V+P+YS LP +Q KIF+ RK +V+TNIAET
Sbjct: 759 QIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 810
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAGRT PG+CFRLYT
Sbjct: 811 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 870
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L
Sbjct: 871 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 930
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 990
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A++ VR QL
Sbjct: 991 EEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKD 1050
Query: 598 IMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
IM R +L C D++ +RK + A YF Q A L+ G+Y+ ++ HLHP+
Sbjct: 1051 IMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPT 1104
Query: 656 NCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
+ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1105 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 1490 (529.6 bits), Expect = 9.5e-153, P = 9.5e-153
Identities = 292/647 (45%), Positives = 431/647 (66%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
ILE+R+ LP++ ++E L +++ N ++I+VGETGSGKTTQ+ Q++ E D T D
Sbjct: 524 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHE--DGYT-DYG--- 577
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQP EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++
Sbjct: 578 MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESL 637
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y +++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++AEKF +F
Sbjct: 638 READLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGN 697
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE
Sbjct: 698 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 757
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+I + + + + + V+P+YS LP +Q KIF+ RK +V+TNIAET
Sbjct: 758 QIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 809
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAGRT PG+CFRLYT
Sbjct: 810 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 869
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L
Sbjct: 870 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 929
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+
Sbjct: 930 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 989
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A++ VR QL
Sbjct: 990 EEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKD 1049
Query: 598 IMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
IM R +L C D++ +RK + A YF Q A L+ G+Y+ ++ HLHP+
Sbjct: 1050 IMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPT 1103
Query: 656 NCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
+ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1104 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1150
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 1490 (529.6 bits), Expect = 9.5e-153, P = 9.5e-153
Identities = 293/647 (45%), Positives = 431/647 (66%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
ILE+R+ LP++ ++E L +++ N ++I+VGETGSGKTTQ+ Q++ E D T D
Sbjct: 64 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHE--DGYT-DYG--- 117
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQP EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++
Sbjct: 118 MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESL 177
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++AEKF +F
Sbjct: 178 READLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGN 237
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE
Sbjct: 238 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 297
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+I + + + + + V+P+YS LP +Q KIF+ RK +V+TNIAET
Sbjct: 298 QIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 349
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAGRT PG+CFRLYT
Sbjct: 350 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 409
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L
Sbjct: 410 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 469
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+
Sbjct: 470 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 529
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A++ VR QL
Sbjct: 530 EEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKD 589
Query: 598 IMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
IM R +L C D++ +RK + A YF Q A L+ G+Y+ ++ HLHP+
Sbjct: 590 IMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPT 643
Query: 656 NCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
+ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 644 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 690
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 1489 (529.2 bits), Expect = 1.2e-152, P = 1.2e-152
Identities = 287/655 (43%), Positives = 432/655 (65%)
Query: 48 GKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVD 107
GK R I E+R+ LPV+ ++E L V++ N VII+VGETGSGKTTQ+ Q++ E
Sbjct: 517 GKSDFSRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHED-- 574
Query: 108 IETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYL 167
++ MI CTQP +EMD +GE+VGY+IRFEDC+S RTV+KY+
Sbjct: 575 ----GYSKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYM 630
Query: 168 TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 227
TDG+LLRE++ DP L+ Y I++DEAHER+L+TDVLFGLL+E++ R DLKL+V SAT++
Sbjct: 631 TDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMD 690
Query: 228 AEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLT 287
+ KF +F P +PGR PV++ +++ DY+E+A++ +Q+H+ GD+L+F+
Sbjct: 691 SSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMP 750
Query: 288 GEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRK 347
G+E+IE C + + + + D + ++P+YS LP +Q KIF+ RK
Sbjct: 751 GQEDIEVTCEVLEERLAEI-DNAPALSILPIYSQLPSDLQAKIFQKSSDGL-------RK 802
Query: 348 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRT 407
VV+TNIAETSLT+DGI+YVID G+ K KVYNPR+ +++L + PIS+A+A+QRSGRAGRT
Sbjct: 803 CVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRT 862
Query: 408 QPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETL 467
PG+ +RLYT++ + ++L T PEI R+NLANTVL LK LG+ DL+ F FMDPP + +
Sbjct: 863 GPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNI 922
Query: 468 MRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV 527
+ +L L LGALD G LT +G +M+EFPLDP +ML+ + + CS E+L I +MLSV
Sbjct: 923 LNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSV 982
Query: 528 PNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKS 587
P+ F RP+ + AD + +F + DHLT LNVY ++QNN +WC ++F++ +A++
Sbjct: 983 PSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRK 1042
Query: 588 ADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDN 647
VRQQL IM + NL + S D+ + +RK + + YF Q A L+ G+Y+ ++
Sbjct: 1043 VREVRQQLKDIMTQQNLSVISCGI---DWDI-VRKCICSAYFYQAARLKGIGEYVNLRTG 1098
Query: 648 QVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
HLHP++ L P++V+Y+E ++T++ +++ T V G WL ++ P ++ +
Sbjct: 1099 MPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSV 1153
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 1486 (528.2 bits), Expect = 2.5e-152, P = 2.5e-152
Identities = 292/647 (45%), Positives = 431/647 (66%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
ILE+R+ LP++ ++E L +++ N ++I+VGETGSGKTTQ+ Q++ E D T D
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHE--DGYT-DYG--- 578
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQP EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++
Sbjct: 579 MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESL 638
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++AEKF +F
Sbjct: 639 READLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGN 698
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE
Sbjct: 699 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 758
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+I + + + + + V+P+YS LP +Q KIF+ RK +V+TNIAET
Sbjct: 759 QIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 810
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAGRT PG+CFRLYT
Sbjct: 811 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 870
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L
Sbjct: 871 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 930
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 990
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
++ +D+ + +F + DHL+ LNVY +K NN WC D+F++ +A++ VR QL
Sbjct: 991 EEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKD 1050
Query: 598 IMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
IM R +L C D++ +RK + A YF Q A L+ G+Y+ ++ HLHP+
Sbjct: 1051 IMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPT 1104
Query: 656 NCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
+ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1105 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 1485 (527.8 bits), Expect = 3.2e-152, P = 3.2e-152
Identities = 291/647 (44%), Positives = 431/647 (66%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
ILE+R+ LP++ ++E L +++ N ++I+VGETGSGKTTQ+ Q++ + D T D
Sbjct: 526 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQ--DGYT-DYG--- 579
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQP EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++
Sbjct: 580 MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESL 639
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++A+KF +F
Sbjct: 640 READLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGN 699
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE
Sbjct: 700 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 759
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+I + + + + + V+P+YS LP +Q KIF+ RK +V+TNIAET
Sbjct: 760 QIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 811
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAGRT PG+CFRLYT
Sbjct: 812 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 871
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L
Sbjct: 872 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 931
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+
Sbjct: 932 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 991
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A++ VR QL
Sbjct: 992 EEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKD 1051
Query: 598 IMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
IM R +L C D++ +RK + A YF Q A L+ G+Y+ ++ HLHP+
Sbjct: 1052 IMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPT 1105
Query: 656 NCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
+ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1106 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1152
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 1483 (527.1 bits), Expect = 5.2e-152, P = 5.2e-152
Identities = 287/649 (44%), Positives = 436/649 (67%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
+LE+R+ LP++ +++ L +++ N ++I+VGETGSGKTTQ+ Q++ E D T
Sbjct: 556 LLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHE--DGYTSYG---- 609
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
M+ CTQP EEM+ +GEEVGY+IRFEDC+S +T++KY+TDG+LLRE++
Sbjct: 610 MVGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLRESL 669
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y +++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++++KF +F
Sbjct: 670 RESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFASFFGN 729
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +QIH+ GDIL+F+ G+E+IE
Sbjct: 730 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSD 789
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+I + + ++ + + V+P+YS LP +Q KIF+ RK +V+TNIAET
Sbjct: 790 QIVERLADL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 841
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+DGI++V+D G+ K KV+NPR+ +++L V PIS+A+A+QR+GRAGRT PG+C+RLYT
Sbjct: 842 SLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGQCYRLYT 901
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+ +F N++ T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L
Sbjct: 902 QSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWIL 961
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD+ G LT G M EFPLDP +SKML+ S +CS +IL I +MLSVP+ F RP+
Sbjct: 962 GALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSMLSVPSIFYRPKGR 1021
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A++ VR QL
Sbjct: 1022 EEESDQVREKFSVPESDHLTYLNVYLQWKNNNYSSIWCNDHFIHTKAMRKVREVRAQLKD 1081
Query: 598 IMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
IM + NL C +D++ IRK + A YF Q A L+ G+Y+ V+ HLHP+
Sbjct: 1082 IMVQQKMNLISCGSDWDV------IRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHLHPT 1135
Query: 656 NCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
+ L + P+++IY+E V+T++ +++ VT V GEWL ++ P +Y + +
Sbjct: 1136 SALFGMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKH 1184
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 1478 (525.3 bits), Expect = 1.8e-151, P = 1.8e-151
Identities = 285/648 (43%), Positives = 442/648 (68%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E+R+ LP + +E+ ++V++ NQVII+VGETGSGKTTQ+ QF+ E D ++
Sbjct: 296 IREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYE-------DGYGQL 348
Query: 118 -MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
MI CTQP EEM+V +G VGY+IRFEDC+S TV+KY+TDG+LLRE+
Sbjct: 349 GMIGCTQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRES 408
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 236
+ +P L+RY I++DEAHER L TDVL GL K++L+ R DLKL+V SAT+ A++F +F
Sbjct: 409 LNEPDLDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFG 468
Query: 237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDAC 296
GAP +PGR PV++ +++ P DY++ A++ V+ IH+ +GDILVF+TG+E+IE C
Sbjct: 469 GAPDFTIPGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVSMGTGDILVFMTGQEDIEVTC 528
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAE 356
+ + + + D + ++P+YS +P +Q KIF+ RK +V+TNIAE
Sbjct: 529 ELVRERLDALNDPP-KLSILPIYSQMPADLQAKIFDRAPPGV-------RKCIVATNIAE 580
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TSLT+DGI+YV+D G++K KVYNP++ +++L ++PIS+A+A QRSGRAGRT PGK FRL+
Sbjct: 581 TSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLF 640
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
TEK+F ++L QT PEI R+NL+NT+L +K LG+ D++ FDFMDPP +T+ +L L
Sbjct: 641 TEKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQDTMTTSLFDLWA 700
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
LGALD+ G++T++G KM+ FP+DP ++K+++ + +Y C+ E+++I +MLSVPN F RP+E
Sbjct: 701 LGALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSMLSVPNVFYRPKE 760
Query: 537 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLV 596
Q+ +D A+ +F + DHLT L+VY +K N +WC +F++ ++L+ A VR QL+
Sbjct: 761 RQEESDAAREKFFVPESDHLTFLHVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVRDQLL 820
Query: 597 RIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHP 654
IM + ++ C D++ +R+ + +GY+ Q A ++ G+Y+ ++ + V LHP
Sbjct: 821 DIMKTQKMDIVSCGTDWDV------VRRCICSGYYHQAAKVKGIGEYINLRTSVTVQLHP 874
Query: 655 SNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
++ L P++V+Y+E +LTS+ ++ TVT V WL D+ +Y +
Sbjct: 875 TSALYGLGFLPDYVVYHELILTSKEYMSTVTSVDPMWLADLGGVFYSV 922
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 1458 (518.3 bits), Expect = 2.3e-149, P = 2.3e-149
Identities = 285/647 (44%), Positives = 436/647 (67%)
Query: 60 EKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM-M 118
E+R+ LP + +E+ L+V++ NQV+++VGETGSGKTTQ+ QF+ E D K M
Sbjct: 183 EQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYE-------DGYAKFGM 235
Query: 119 IACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMT 178
I CTQP EEM+V +G+ VGY+IRFEDC+ T +KY+TDG+LLRE++
Sbjct: 236 IGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLRESLV 295
Query: 179 DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGA 238
L++Y I++DEAHER L TDVL GLLK++L R DLKL+V SAT+ AE+F +F GA
Sbjct: 296 QTDLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERFSRFFGGA 355
Query: 239 PLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRK 298
P +PGR PV++ +++ P DY+++A++ V+ IH+ + GDILVF+TG+E+IE C
Sbjct: 356 PEFIIPGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILVFMTGQEDIEATCEL 415
Query: 299 ITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETS 358
+ + + + D + ++P+YS +P Q KIFE RK++V+TNIAETS
Sbjct: 416 VDERLKLLNDPP-KLSILPIYSQMPAEQQAKIFERAAPGV-------RKVIVATNIAETS 467
Query: 359 LTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTE 418
LT+DGI++V+D G++K KVYNP++ +++L ++PIS+A+A+QRSGRAGRT PGK +RLYTE
Sbjct: 468 LTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYTE 527
Query: 419 KSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLG 478
++ N++ QT PEI R++L+NTVL LK LG+ DL+ FDFMDPP ET+ +L L LG
Sbjct: 528 VAYKNEMYLQTIPEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETISTSLFELWSLG 587
Query: 479 ALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPK-YNCSNEILSISAMLSVPNCFVRPREA 537
ALD+ G+LT +G +M+ FP+DP ++K+++ + + Y CS E+L+I +MLSVPN F RP+E
Sbjct: 588 ALDNLGDLTHLGRQMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPNVFYRPKER 647
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQL-- 595
Q+ +D A+ +F + DHLTLL+VY +K N WC +F++ + L+ A VR QL
Sbjct: 648 QEESDAAREKFFVPESDHLTLLHVYTQWKSNGYSDHWCTKHFLHAKTLRRAKEVRDQLND 707
Query: 596 VRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
+ +M + L C D++ IRK + +G++ Q A ++ G+++ ++ + + LHP+
Sbjct: 708 IMVMQKLPLISCGTDWDE------IRKCICSGFYHQAARVKGIGEFINLRTSVSMALHPT 761
Query: 656 NCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
+ L + PE+V+Y+E +LTS+ ++ TVT V WL ++ +Y +
Sbjct: 762 SALYGLGYVPEYVVYHELILTSKEYMSTVTAVDPHWLAELGGVFYSV 808
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 1450 (515.5 bits), Expect = 1.6e-148, P = 1.6e-148
Identities = 290/643 (45%), Positives = 427/643 (66%)
Query: 60 EKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMI 119
E+R+ LP + +E+ L V++ NQV+I+VGETGSGKTTQ+ QF+ E R MI
Sbjct: 487 EQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYED------GYHRNGMI 540
Query: 120 ACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTD 179
CTQP EEM V +G VGYSIRFED + TV+KY+TDG+LLRE++
Sbjct: 541 GCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQ 600
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
LE+Y VI++DEAHER+L TD+L GLLK+VL R D+KL+V SAT+ ++KF +F GAP
Sbjct: 601 NNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAP 660
Query: 240 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKI 299
+PGR +PV+I + + P DY+EAA+R V+QIH+ +P+GDILVF+TG+E+IE C I
Sbjct: 661 QFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEII 720
Query: 300 TKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSL 359
+ + D + ++P+YS +P +Q KIF+ RK+VV+TNIAETSL
Sbjct: 721 ADRLNQLHD-APRLSILPIYSQMPADLQAKIFDSAEPGV-------RKVVVATNIAETSL 772
Query: 360 TIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEK 419
T+ GI YV+D G+ K K+YN ++ +++L V+PIS+A+A+QR+GRAGRT PG +RLYTE
Sbjct: 773 TVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEM 832
Query: 420 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 479
++ ++ T PEI R+NL+NTVL LK LG++++ FDFMD P +TLM +L L LGA
Sbjct: 833 AYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGA 892
Query: 480 LDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQK 539
LD+ G LT +G+KMS FP+DP +SK+++ + Y C+ EI++I +MLSVP+ F RP+E +
Sbjct: 893 LDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAE 952
Query: 540 AADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIM 599
+D A+ +F + DHL LLN+Y +++N SWC +F++ + LK A ++RQQLV IM
Sbjct: 953 ESDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIM 1012
Query: 600 ARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL- 658
++ + L S D+ + +R+ + + YF Q A + G+Y+ ++ HLH ++ L
Sbjct: 1013 SKQKISLESVS----DWDI-VRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLY 1067
Query: 659 --DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
+ P++VIY+E VLTS+ ++ VT V WL + YY +
Sbjct: 1068 GLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSV 1110
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 1427 (507.4 bits), Expect = 4.5e-146, P = 4.5e-146
Identities = 299/696 (42%), Positives = 439/696 (63%)
Query: 23 KLVKTNGVGPGAMMNNNNSLINRWNGKP--YSQRYYEILEK-RKSLPVWQQKEEFLQVLK 79
K K PG L G P ++ +EK R+ LPV++ + L +++
Sbjct: 1 KFWKPGSEAPGVC--EERDLSTETTGSPIVFNPHTALTIEKQRQRLPVFKHRNNILYLVE 58
Query: 80 ANQVIILVGETGSGKTTQIPQFVLE-GVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXE 138
+ Q +++VGETGSGK+TQIPQ++LE G E +I TQP E
Sbjct: 59 SFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGK------VIGVTQPRRVAATSVATRVAE 112
Query: 139 EMDVTIGEEVGYSIRFEDCSSAR-TVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERT 197
E +G EVGY+IRF+DCS T +K+LTDGML+RE M+DPLL++Y V++LDEAHERT
Sbjct: 113 ERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPLLKKYSVLILDEAHERT 172
Query: 198 LATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY----G------APLMKVPGRL 247
L TD+ GLLK++LK R DL+L+V SATL+A+KFQ +F G ++ V GR
Sbjct: 173 LYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFFNLNESGDASKDTCGILTVEGRT 232
Query: 248 HPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMG 307
PV+IFYT P DY++A + TV++IH E GD+L FLTG+EE+E + ++ +
Sbjct: 233 FPVDIFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLS 292
Query: 308 DQVGPVK---VVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGI 364
+ G K V+P+Y+ LP Q ++FE RK+VV+TNIAETS+TI+G+
Sbjct: 293 -RYGMKKHLCVLPMYAGLPYNEQMRVFERMAPTV-------RKVVVATNIAETSITINGV 344
Query: 365 VYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNND 424
V+VID F K + YNPR +ESL+V+PISKASA QR+GRAGR + GKCFRLYTE+ F
Sbjct: 345 VFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEK- 403
Query: 425 LQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDG 484
L T PE+ RSNLA +L LK LGID+++ F F+ PP +++++ALE+L LG LD G
Sbjct: 404 LPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLFALGGLDQYG 463
Query: 485 NLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADE 543
LT+ MG +M+EFPL P +KML+ES + CS EI++I+AM+ + N FV P +K+A
Sbjct: 464 RLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVAPHNQRKSAAR 523
Query: 544 AKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFN 603
+F +GDHLT+LNVY A+ ++ + WC D+F+N++ L A VR+QL ++ +F
Sbjct: 524 EHRKFAVAEGDHLTMLNVYEAFIKHQKSSQWCQDHFLNYKGLLRATAVREQLRHLLNKFK 583
Query: 604 LKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL--DHK 661
+ S++ D I + +++G+F A + +G Y T++D++ +++HP + L +
Sbjct: 584 VPRTSSE-GDPDV---ILRCIVSGFFANAARMHHSGSYRTLRDDRELYIHPDSVLYGEKP 639
Query: 662 PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
P+WV++NE V TS+ ++R VT V WL+++APH+Y
Sbjct: 640 PKWVVFNEVVQTSKYYMRDVTAVESSWLVELAPHFY 675
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 1423 (506.0 bits), Expect = 1.2e-145, P = 1.2e-145
Identities = 287/665 (43%), Positives = 431/665 (64%)
Query: 50 PYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE 109
PY+ E ++R+ LPV++ + L +++ Q ++++GETG GK+TQIPQ++ E
Sbjct: 41 PYAALSIE--QQRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAG--W 96
Query: 110 TPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSA-RTVLKYLT 168
T + R ++ TQP EE +G EVGY IRF+DC++ T +K+LT
Sbjct: 97 TAEGR---VVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLT 153
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
DGML+RE M DPLL +Y I+LDEAHERTL TD+ GLLK++ K R DL+L+V SATL+A
Sbjct: 154 DGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDA 213
Query: 229 EKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP 278
EKF+ +F P ++ V GR PV+IFY Q P DY+++ + TV++IH E
Sbjct: 214 EKFRDFFNHNDTSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEG 273
Query: 279 SGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIFEXXX 335
GDIL FLTG+EE+E + ++ +G Q G ++++P+Y+ LP Q K+FE
Sbjct: 274 DGDILAFLTGQEEVETVVSMLIEQARALG-QTGMKRHLRILPMYAGLPSFEQMKVFERVS 332
Query: 336 XXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKA 395
RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P+S+A
Sbjct: 333 RSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQA 385
Query: 396 SAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH 455
SA+QR+GR GR++ GKC+RLYTE++F+ L T PE+ RSNLA +L LK LGID+++
Sbjct: 386 SANQRAGRGGRSRSGKCYRLYTEEAFDQ-LPQSTVPEMQRSNLAPVILQLKALGIDNVLR 444
Query: 456 FDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNC 514
F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES + C
Sbjct: 445 FHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGC 504
Query: 515 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSW 574
S EILSI+AM+ + N FV P + A A +F +GDHLT+LNVY A+ ++N++ W
Sbjct: 505 SQEILSIAAMMQIQNVFVVPSNQKSQAIRAHRKFAVEEGDHLTMLNVYEAFIKHNKNSQW 564
Query: 575 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 634
C ++F+N++ L A VR+QL +++ +F + S++ D + + +++G+F A
Sbjct: 565 CQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSE-GDPD---PVLRCIVSGFFANAAR 620
Query: 635 LERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
TG Y T++D+ +H+HP++ L + P WVIYNE + TS+ ++R VT + WL+++
Sbjct: 621 FHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLEL 680
Query: 693 APHYY 697
APH+Y
Sbjct: 681 APHFY 685
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
Identities = 289/687 (42%), Positives = 435/687 (63%)
Query: 31 GPGAMMNNNNSLINRWNGKPYSQRYYEIL---EKRKSLPVWQQKEEFLQVLKANQVIILV 87
GPG ++ + +G Y L ++R+ LPV++ + L +++ Q +++V
Sbjct: 17 GPGVSISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIV 76
Query: 88 GETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE 147
GETG GK+TQIPQ++ E T + R ++ TQP EE +G E
Sbjct: 77 GETGCGKSTQIPQYLAEAG--WTAEGR---VVGVTQPRRVAAVTVAGRVAEERGAVLGHE 131
Query: 148 VGYSIRFEDCSSA-RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGL 206
VGY IRF+DC+ T +K+LTDGML+RE M DPLL +Y VI+LDEAHERTL TD+ GL
Sbjct: 132 VGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGL 191
Query: 207 LKEVLKNRPDLKLVVMSATLEAEKFQGYFY----GAP------LMKVPGRLHPVEIFYTQ 256
LK++ K R DL+L+V SATL+A+KF+ +F P ++ V GR PV+IFY Q
Sbjct: 192 LKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Query: 257 EPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---V 313
P DY+++ + TVV+IH E GD+L FLTG+EE+E + ++ + + G +
Sbjct: 252 SPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALA-RTGMKRHL 310
Query: 314 KVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFA 373
+V+P+Y+ LP Q K+FE RK++V+TN+AETS+TI GIVYVID GF
Sbjct: 311 RVLPMYAGLPSFEQMKVFERVSRSV-------RKVIVATNVAETSITISGIVYVIDCGFV 363
Query: 374 KQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEI 433
K + YNPR +E L+V P+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T PE+
Sbjct: 364 KLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEM 422
Query: 434 LRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEK 492
RSNLA +L LK LGID+++ F FM PP +++++ALE+L LG LD D LTE +G +
Sbjct: 423 QRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMR 482
Query: 493 MSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHID 552
++EFPL+P +KML+ES + CS EILSI+AM+ + N FV P + A +F +
Sbjct: 483 IAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEE 542
Query: 553 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFN 612
GDHLT+LN+Y A+ ++N+D WC ++F+N++ L A VR+QL +++ +F + S++
Sbjct: 543 GDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSE-G 601
Query: 613 SRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEY 670
D + + +++G+F A TG Y T++D+ +H+HP++ L + P WVIYNE
Sbjct: 602 DPDL---VLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEV 658
Query: 671 VLTSRNFIRTVTDVRGEWLIDIAPHYY 697
+ TS+ ++R VT + WL+++APH+Y
Sbjct: 659 IQTSKYYMRDVTAIESAWLLELAPHFY 685
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 1420 (504.9 bits), Expect = 2.5e-145, P = 2.5e-145
Identities = 293/695 (42%), Positives = 431/695 (62%)
Query: 23 KLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEIL---EKRKSLPVWQQKEEFLQVLK 79
K K GPG ++ + +G Y L ++R+ LPV++ + L +++
Sbjct: 9 KFWKPGTEGPGVSISEERQSVTENSGTTVIYNPYAALSIEQQRQKLPVFKLRNHILYLVE 68
Query: 80 ANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEE 139
Q +++VGETG GK+TQ+PQ++ E T + R ++ TQP +E
Sbjct: 69 NYQTVVIVGETGCGKSTQVPQYLAEAG--WTAEGR---VVGVTQPRRVAAVTVAGRVADE 123
Query: 140 MDVTIGEEVGYSIRFEDCSSA-RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTL 198
+G EVGY IRF+DC+ T +K+LTDGML+RE M DPLL +Y V++LDEAHERTL
Sbjct: 124 RGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTL 183
Query: 199 ATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY----GAP------LMKVPGRLH 248
TD+ GLLK++ K R DL+L+V SATL+AEKF+ +F P ++ V GR
Sbjct: 184 YTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTF 243
Query: 249 PVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGD 308
PV+IFY Q P DY++A + TVV+IH E GDIL FLTG+EE+E + ++ +
Sbjct: 244 PVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALA- 302
Query: 309 QVGPVK---VVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIV 365
+ G K V+P+Y+ LP Q K+FE RK++V+TN+AETS+TI GIV
Sbjct: 303 RTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSV-------RKVIVATNVAETSITISGIV 355
Query: 366 YVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDL 425
YVID GF K + YNPR +E L+V P+S+ASA+QR+GR GR + GKC+RLYTE++F L
Sbjct: 356 YVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQ-L 414
Query: 426 QPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN 485
T PE+ RSNLA VL LK LGID ++ F FM PP +++++ALE+L LG LD D
Sbjct: 415 PQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCR 474
Query: 486 LTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEA 544
LTE +G +++EFPL+P +KML+ES + CS EILSI+AM+ + N FV P + A
Sbjct: 475 LTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRV 534
Query: 545 KARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNL 604
+F +GDHLT+LNVY A+ ++N+ WC ++F+N++ L A VR QL +++ +F +
Sbjct: 535 HRKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQV 594
Query: 605 KLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKP 662
S++ D + + +++G+F A TG Y T++D+ +H+HP++ L + P
Sbjct: 595 PKMSSE-GDPD---PVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPP 650
Query: 663 EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
WVIYNE + TS+ ++R VT + WL+++APH+Y
Sbjct: 651 RWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 1418 (504.2 bits), Expect = 4.0e-145, P = 4.0e-145
Identities = 290/641 (45%), Positives = 416/641 (64%)
Query: 60 EKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMI 119
E RKSLPV+ +EEFL+++ NQ +I+VGETGSGKTTQ+PQ++ E R +I
Sbjct: 224 EVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEA-----GYSRNNQVI 278
Query: 120 ACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFED-CSSARTVLKYLTDGMLLREAMT 178
ACTQP EM V +GE+VGY+IRF+D C TV+KY+TDGMLLRE +
Sbjct: 279 ACTQPRRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQ 338
Query: 179 DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN--RPDLKLVVMSATLEAEKFQGYFY 236
DP L +Y I++DEAHERTL+T++L LLK+V+ + DLK+++ SAT+ AEKF +F
Sbjct: 339 DPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFN 398
Query: 237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDILVFLTGEEEIEDA 295
AP++ +PGR PV+I YT++PE +Y++AAI T+ QIHM +P GDILVFLTG++EIE
Sbjct: 399 NAPILNIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIETM 458
Query: 296 CRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIA 355
+ I +GDQ+ P+ V +Y+ LP +QQKIF+ RKIV++TNIA
Sbjct: 459 EEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNT-------RKIVLATNIA 511
Query: 356 ETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRL 415
ETS+TIDGI YVIDPG+ KQ VYNP +ESL+V P S+ASA QR+GRAGR PGKCFRL
Sbjct: 512 ETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKCFRL 571
Query: 416 YTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLN 475
+T+ SF N+L PEI R NL + +L L LGI+DL+ F+FMDPP+ E +++AL +L
Sbjct: 572 FTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIKALNLLY 631
Query: 476 YLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVP-NCFVRP 534
LGAL+ G LT+ G+KMSEFPLDP +K ++ S K++ + +I+SI AML+ N F RP
Sbjct: 632 ALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRP 691
Query: 535 REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQ 594
++ ++ AD+ K F + GD LL ++ + + WC D F+ ++ +K N+ +Q
Sbjct: 692 KDKKELADKRKQEFNDLQGDQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKRIKNIYEQ 751
Query: 595 LVRIMARFNLKLCSNDFNSRDYYVN-------IRKAMLAGYFMQVAHLERTG---QYLTV 644
L+R+ + +++ S RD+ + K +++G+F + L G Q LT
Sbjct: 752 LIRLSKKIGIEVNSRH-QHRDHLQENTDNNTLLTKCLISGFFNNIVKLSPMGDCYQKLTN 810
Query: 645 K---DNQVVHLHPSNC---LDHKPEWVIYNEYVLTSRNFIR 679
+N ++HPS+C L KP++++Y E VLTS+ ++R
Sbjct: 811 GKGGNNTPCYIHPSSCIYKLKPKPKYLLYYELVLTSKEYMR 851
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 1417 (503.9 bits), Expect = 5.1e-145, P = 5.1e-145
Identities = 288/665 (43%), Positives = 429/665 (64%)
Query: 50 PYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE 109
PY+ E ++R+ LPV++ + L +++ Q +++VGETG GK+TQIPQ++ E
Sbjct: 41 PYAALSIE--QQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAG--W 96
Query: 110 TPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSA-RTVLKYLT 168
T + R ++ TQP EE +G EVGY IRF+DC+ T +K+LT
Sbjct: 97 TAEGR---VVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLT 153
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
DGML+RE M DPLL +Y I+LDEAHERTL TD+ GLLK++ K R DL+L+V SATL+A
Sbjct: 154 DGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDA 213
Query: 229 EKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP 278
EKF+ +F P ++ V GR PV+IFY Q P DY+++ + TV++IH E
Sbjct: 214 EKFRDFFNQNDTSDPPRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEG 273
Query: 279 SGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIFEXXX 335
GDIL FLTG+EE+E + ++ +G + G ++V+P+Y+ LP Q K+FE
Sbjct: 274 DGDILAFLTGQEEVETVVSMLIEQARALG-RTGMKRHLRVLPMYAGLPSFEQMKVFERVS 332
Query: 336 XXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKA 395
RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P+S+A
Sbjct: 333 RSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQA 385
Query: 396 SAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH 455
SA+QR+GRAGR++ GKC+RLYTE +F+ L T PE+ RSNLA +L LK LGID+++
Sbjct: 386 SANQRAGRAGRSRSGKCYRLYTEDAFDQ-LPQSTVPEMQRSNLAPVILQLKALGIDNVLR 444
Query: 456 FDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNC 514
F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES + C
Sbjct: 445 FHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGC 504
Query: 515 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSW 574
S EILSI+AM+ + N FV P + A +F +GDHLT+LNVY A+ ++N++ W
Sbjct: 505 SQEILSIAAMMQIQNIFVVPSNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQW 564
Query: 575 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 634
C ++F+N++ L A VR+QL +++ +F + S++ D + + +++G+F A
Sbjct: 565 CQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSE-GDPD---PVLRCIVSGFFANAAR 620
Query: 635 LERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
TG Y T++D+ +H+HP++ L + P WVIYNE + TS+ ++R VT + WL+++
Sbjct: 621 FHSTGVYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLEL 680
Query: 693 APHYY 697
APH+Y
Sbjct: 681 APHFY 685
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 1393 (495.4 bits), Expect = 1.8e-142, P = 1.8e-142
Identities = 286/682 (41%), Positives = 437/682 (64%)
Query: 36 MNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKT 95
+N+NN+L N+ + EI +++SLPV+ K+ L+ K + +I++ ETG+GKT
Sbjct: 46 INDNNNLKNQLEIPKEIPK--EIKLQKESLPVFTAKDALLKNFKEHSTVIIISETGTGKT 103
Query: 96 TQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFE 155
TQIPQ++ E + +IA TQP +EM V +G++VGY +RF+
Sbjct: 104 TQIPQYLYEN------GYKDNGIIAITQPRRVAAVSISKRVSQEMGVELGDQVGYCVRFD 157
Query: 156 DCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP 215
D ++ +T LKY+TDGML+REAM D L +Y VI+LDEAHERTL TDVLFGLLK + K R
Sbjct: 158 DKTNEKTKLKYMTDGMLVREAMLDSSLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRRE 217
Query: 216 D---LKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQ 272
LK+++MSATL+AE F YF AP++ + GR PV+I+YT+E ++DY++AA+ TV+Q
Sbjct: 218 KKNPLKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTEEIQKDYVDAALITVLQ 277
Query: 273 IHMC------------EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 320
IH+ E GDILVFLTG +EIE+ + + I + + V P++S
Sbjct: 278 IHIAHLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFS 337
Query: 321 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 380
LP Q K+FE RK++++TNIAETSLTI+GI YV+D G K K++NP
Sbjct: 338 ALPQEQQMKVFEKAPKGS-------RKVILATNIAETSLTINGIRYVVDSGAVKSKIFNP 390
Query: 381 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 440
++ ++SL + PISKASA QR+GRAGR GKC+RLYT+++F L + PEI RSN+AN
Sbjct: 391 KIGIDSLNIIPISKASAKQRTGRAGREFEGKCYRLYTQETFEK-LDTSSIPEIKRSNIAN 449
Query: 441 TVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDP 500
+L LK +GI+D++ FDF++ P +++++LE+L L A+ D+G+LTE+G+KM+ FPLDP
Sbjct: 450 VILQLKTIGINDILSFDFLESPPVASVIKSLELLFCLDAISDNGSLTELGKKMALFPLDP 509
Query: 501 QMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLN 560
SK L++S ++ CS E+L I ++LSV + F P+E +K ++ K F DGDH+T LN
Sbjct: 510 MYSKTLIKSIEFECSEEVLIIISILSVESIFFTPKEKKKEVEDVKKIFFSPDGDHITFLN 569
Query: 561 VYHAYKQNN--EDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKL--CSNDFNSRDY 616
V+ ++++ + WC+D+F+N +++ NV +QLV+ L + C +DF+
Sbjct: 570 VFREFQKSKPQQQQQWCFDHFINLKSMIKVLNVFEQLVKYCISLKLPIVSCGSDFD---- 625
Query: 617 YVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSR 675
I+K+ + G+F+ A L+ +Y T+ DN+ + +HP++ L D KP+ ++YNE +T++
Sbjct: 626 --RIKKSFIGGFFLNTAILQPDKKYKTMVDNKEIQIHPTSFLFDQKPQHILYNELTITTK 683
Query: 676 NFIRTVTDVRGEWLIDIAPHYY 697
F R + + G WL +I P YY
Sbjct: 684 AFARNIIPIEGSWLAEICPKYY 705
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 1388 (493.7 bits), Expect = 6.1e-142, P = 6.1e-142
Identities = 279/647 (43%), Positives = 415/647 (64%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
ILE+R+ LP++ ++E L +++ N ++I+VGETGSGKTTQ+ Q++ E D T D
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHE--DGYT-DYG--- 578
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQP EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++
Sbjct: 579 MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESL 638
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++AEKF +F
Sbjct: 639 READLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGN 698
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE
Sbjct: 699 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 758
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+I + + + + + V+P+YS LP +Q KIF+ RK +V+TNIAET
Sbjct: 759 QIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 810
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+DGI++VID G+ K KV +P + L + I K + +G +G T P +C RLYT
Sbjct: 811 SLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSP-RCCRLYT 869
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L
Sbjct: 870 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 929
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+
Sbjct: 930 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 989
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
++ +D+ + +F + DHL+ LNVY +K NN WC D+F++ +A++ VR QL
Sbjct: 990 EEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKD 1049
Query: 598 IMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
IM R +L C D++ +RK + A YF Q A L+ G+Y+ ++ HLHP+
Sbjct: 1050 IMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPT 1103
Query: 656 NCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
+ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1104 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1150
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 834 (298.6 bits), Expect = 2.7e-141, Sum P(3) = 2.7e-141
Identities = 173/401 (43%), Positives = 253/401 (63%)
Query: 305 NMGDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDG 363
N D + P + P+YS L Q KIF+ RKI+VSTNIAETSLT+DG
Sbjct: 763 NTNDHMIYPFYIFPIYSQLSSEQQSKIFKKYDL---------RKIIVSTNIAETSLTLDG 813
Query: 364 IVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNN 423
I YVID G+ K KVYN + ++ L V+PIS+A+A+QRSGRAGRT G C+RLYTE +F
Sbjct: 814 IKYVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLC 873
Query: 424 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD 483
DL PEI RSNL+N VL LK L + +L FDF+D P+ E+++ +L L LGA++++
Sbjct: 874 DLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNE 933
Query: 484 GNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADE 543
GNLT++G KM +FPLDP +SK+++ S + C+ EIL I +MLS P+ F+ +E ++ +
Sbjct: 934 GNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIES 993
Query: 544 AKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFN 603
K +F + DHLTLLN+Y ++ +N SWC NF+ ++AL A V QL+ I+ N
Sbjct: 994 KKEKFTVPESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLN 1053
Query: 604 LKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL---DH 660
+K S D N + IRK + +GYF A L+ +Y+ ++ N H+HP++ L +
Sbjct: 1054 IKNVSCD-NKWEL---IRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGY 1109
Query: 661 KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
P++VIY E V T++ ++R VT V EWL ++ P ++ + N
Sbjct: 1110 TPDYVIYQEIVFTTKEYMRNVTTVDPEWLCELGPLFFYMKN 1150
Score = 545 (196.9 bits), Expect = 2.7e-141, Sum P(3) = 2.7e-141
Identities = 109/245 (44%), Positives = 158/245 (64%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
E+L+ ++SLP+++ K E L + N +II+VGETGSGKTTQI Q++ E R
Sbjct: 471 ELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYE------EGYHRN 524
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
+I CTQP EM+V IG VGY+IRFED ++ T ++Y+TDG+LLRE
Sbjct: 525 GIICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRET 584
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 236
+ D L++Y VI++DEAHER++ TDVL G+LK + R DLKL+V SAT++A+KF +F
Sbjct: 585 LNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFG 644
Query: 237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-----GDILVFLTGEEE 291
AP+ + GR V I Y + P DY+E A++ +QIH+ + + GDIL+F+TG+E+
Sbjct: 645 NAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQED 704
Query: 292 IEDAC 296
I C
Sbjct: 705 INATC 709
Score = 39 (18.8 bits), Expect = 2.7e-141, Sum P(3) = 2.7e-141
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 37 NNNNSLINRWNGKPYSQRYYEILEKRK 63
+N +L N+ + YS + +E EK+K
Sbjct: 164 SNKYNLSNKQHHNRYSNKTFEKDEKQK 190
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 834 (298.6 bits), Expect = 2.7e-141, Sum P(3) = 2.7e-141
Identities = 173/401 (43%), Positives = 253/401 (63%)
Query: 305 NMGDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDG 363
N D + P + P+YS L Q KIF+ RKI+VSTNIAETSLT+DG
Sbjct: 763 NTNDHMIYPFYIFPIYSQLSSEQQSKIFKKYDL---------RKIIVSTNIAETSLTLDG 813
Query: 364 IVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNN 423
I YVID G+ K KVYN + ++ L V+PIS+A+A+QRSGRAGRT G C+RLYTE +F
Sbjct: 814 IKYVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLC 873
Query: 424 DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD 483
DL PEI RSNL+N VL LK L + +L FDF+D P+ E+++ +L L LGA++++
Sbjct: 874 DLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNE 933
Query: 484 GNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADE 543
GNLT++G KM +FPLDP +SK+++ S + C+ EIL I +MLS P+ F+ +E ++ +
Sbjct: 934 GNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIES 993
Query: 544 AKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFN 603
K +F + DHLTLLN+Y ++ +N SWC NF+ ++AL A V QL+ I+ N
Sbjct: 994 KKEKFTVPESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLN 1053
Query: 604 LKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL---DH 660
+K S D N + IRK + +GYF A L+ +Y+ ++ N H+HP++ L +
Sbjct: 1054 IKNVSCD-NKWEL---IRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGY 1109
Query: 661 KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
P++VIY E V T++ ++R VT V EWL ++ P ++ + N
Sbjct: 1110 TPDYVIYQEIVFTTKEYMRNVTTVDPEWLCELGPLFFYMKN 1150
Score = 545 (196.9 bits), Expect = 2.7e-141, Sum P(3) = 2.7e-141
Identities = 109/245 (44%), Positives = 158/245 (64%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
E+L+ ++SLP+++ K E L + N +II+VGETGSGKTTQI Q++ E R
Sbjct: 471 ELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYE------EGYHRN 524
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
+I CTQP EM+V IG VGY+IRFED ++ T ++Y+TDG+LLRE
Sbjct: 525 GIICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRET 584
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 236
+ D L++Y VI++DEAHER++ TDVL G+LK + R DLKL+V SAT++A+KF +F
Sbjct: 585 LNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFG 644
Query: 237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-----GDILVFLTGEEE 291
AP+ + GR V I Y + P DY+E A++ +QIH+ + + GDIL+F+TG+E+
Sbjct: 645 NAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQED 704
Query: 292 IEDAC 296
I C
Sbjct: 705 INATC 709
Score = 39 (18.8 bits), Expect = 2.7e-141, Sum P(3) = 2.7e-141
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 37 NNNNSLINRWNGKPYSQRYYEILEKRK 63
+N +L N+ + YS + +E EK+K
Sbjct: 164 SNKYNLSNKQHHNRYSNKTFEKDEKQK 190
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 1372 (488.0 bits), Expect = 3.0e-140, P = 3.0e-140
Identities = 284/698 (40%), Positives = 434/698 (62%)
Query: 23 KLVKTNGVGPGAMMNNNNSLINRWNG-----KPYSQRYYEILEKRKSLPVWQQKEEFLQV 77
K K GPG ++ +G PY+ E ++R+ LPV++ + L +
Sbjct: 9 KFWKPGTEGPGVSVSEERQSPAESSGVTVVYNPYASLSIE--QQRQKLPVFKLRNHILYL 66
Query: 78 LKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXX 137
+++ Q +++VGETG GK+TQIPQ++ E T + R ++ TQP
Sbjct: 67 VESYQTLVIVGETGCGKSTQIPQYLAEAG--WTAEGR---VVGVTQPRRVAAVSVAGRVA 121
Query: 138 EEMDVTIGEEVGYSIRFEDCSSAR-TVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHER 196
+E +G EVGY IRF+DC+ + T +K+LTDGML+RE M DPLL RY V++LDEAHER
Sbjct: 122 DERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHER 181
Query: 197 TLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY----GAP------LMKVPGR 246
TL TD+ GLLK++ K R DL+L+V SATL+AEKF+ +F G P ++ V GR
Sbjct: 182 TLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGR 241
Query: 247 LHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNM 306
PV+IFY Q P DY+++ + T ++IH E GDIL FLTG+EE+E + ++ +
Sbjct: 242 TFPVDIFYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARAL 301
Query: 307 GDQVGP---VKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDG 363
+ G ++V+P+Y+ LP Q K+FE RK++V+TN+AETS+TI G
Sbjct: 302 S-RTGMRKHLRVLPMYAGLPSPDQMKVFERVSRSV-------RKVIVATNVAETSITIHG 353
Query: 364 IVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNN 423
I YVID GF K + YNP+ +E L+V P+SKASA+QR+GRAGR + GKC+RLYT +
Sbjct: 354 IAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTATEEDF 413
Query: 424 DLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDD 482
+ PQ T PE+ RSNLA +L LK LGID+++ F F+ PP +++++ALE+L LG LD
Sbjct: 414 EKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDM 473
Query: 483 DGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAA 541
LTE +G +++EFPL+P +KML+ES + CS EIL+I+AM+ + N F+ P + A
Sbjct: 474 HCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFLIPPNQKSQA 533
Query: 542 DEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMAR 601
+F +GDHLT+LNVY A+ ++++ WC ++F+N++ L A VR+QL +++
Sbjct: 534 ARQHRKFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVC 593
Query: 602 FNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL--D 659
F + S++ D + + +++G+F A TG Y T++D+ +H+HP++ L +
Sbjct: 594 FKVPKKSSE-GDPD---PVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPTSVLYAE 649
Query: 660 HKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
P WV+YNE + T++ ++R VT + WL+++APH+Y
Sbjct: 650 KPPRWVVYNEVIQTAKYYMRDVTAIESAWLVELAPHFY 687
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 1371 (487.7 bits), Expect = 3.9e-140, P = 3.9e-140
Identities = 291/699 (41%), Positives = 441/699 (63%)
Query: 4 ERKRKVSLFDVVDET-SVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKR 62
++ RK S T SV L + G ++ ++NS + + S+R +ILE+R
Sbjct: 35 KKNRKASKNTTKKSTVSVVNFLEQDTDFGANEVVGSDNSSPEKRSENSPSKRK-DILEQR 93
Query: 63 KSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACT 122
K+LP+W+ + Q ++ N+VI++VGETGSGK+TQIPQF+ E P ++ +A T
Sbjct: 94 KNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNE-----CP-YAQEGCVAIT 147
Query: 123 QPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLL 182
QP E +GE+VGYSIRF+D +S +T +KYLTDGMLLRE + DP+L
Sbjct: 148 QPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPIL 207
Query: 183 ERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMK 242
+Y ++LDEAHERTL TD+L G +K+++K RP L++++MSATL AE+F +F GA +
Sbjct: 208 SQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICY 267
Query: 243 VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKE 302
+ GR +PV+I YT PE DYL+A +RT+ Q+H P GDILVFLTG++EIE A + K
Sbjct: 268 ISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIE-ALEALIKS 326
Query: 303 ITN-MGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTI 361
+ + + ++ PL+++LP Q ++F RK+V+STNIAETS+TI
Sbjct: 327 YSKQLPSNLPQIQACPLFASLPQEQQLQVF-------LPALANHRKVVLSTNIAETSVTI 379
Query: 362 DGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSF 421
GI YVID G AK K +N ++ +ESL V PIS+++A QRSGRAGR G+C+R+YTE F
Sbjct: 380 SGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF 439
Query: 422 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 481
+ L +T PEI R +L+ VLTLK G +D+++F +MDPP+ E L+RALE L +GALD
Sbjct: 440 DK-LPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALD 498
Query: 482 DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAA 541
D+G++ ++G +MS PL P +++ ++ + ++NC +E++ + + LS + F+ P+E + A
Sbjct: 499 DNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEA 558
Query: 542 DEAKARFGHIDGDHLTLLNVYHAYKQNNEDP--SWCYDNFVNHRALKSADNVRQQLVRIM 599
EA+ +F H +GD LT LN Y +++ D WC NF+N RALK+ ++R+QL
Sbjct: 559 IEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHC 618
Query: 600 ARFNLKLCSN-DFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL 658
+ +L S+ + NS N+ + L+GY A L G Y T+ NQ + +HPS+ L
Sbjct: 619 LKDGWELNSSPEVNSE----NLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSL 674
Query: 659 -DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 696
K E ++Y+E V T+++++R V+ +R WL +APHY
Sbjct: 675 FGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHY 713
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 1355 (482.0 bits), Expect = 1.9e-138, P = 1.9e-138
Identities = 283/665 (42%), Positives = 424/665 (63%)
Query: 50 PYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE 109
PY+ E ++R+ LPV++ + L +++ Q +++VGETG GK+TQIPQ++ E
Sbjct: 41 PYAALSIE--QQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAG--W 96
Query: 110 TPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSA-RTVLKYLT 168
T + R ++ TQP EE +G EVGY IRF+DC+ T +K+LT
Sbjct: 97 TAEGR---VVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLT 153
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
DGML+RE M DPLL +Y I+LDEAHERTL TD+ GLLK++ + R DL+L+V SATL+A
Sbjct: 154 DGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDA 213
Query: 229 EKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP 278
EKF+ +F P ++ V GR PV+IFY Q P DY+++ + TV++IH E
Sbjct: 214 EKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEG 273
Query: 279 SGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIFEXXX 335
GDIL FLTG+EE+E + ++ +G + G ++V+P+Y+ LP Q K+FE
Sbjct: 274 DGDILAFLTGQEEVETVVSMLIEQARALG-RTGMKRHLRVLPMYAGLPSFEQMKVFERVS 332
Query: 336 XXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKA 395
RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V+P+S+A
Sbjct: 333 RSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQA 385
Query: 396 SAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLV 454
SA+QR+GRAGR++ GKC+RLYTE++F D PQ T PE+ RSNLA +L LK LGID+++
Sbjct: 386 SANQRAGRAGRSRSGKCYRLYTEEAF--DKLPQCTVPEMQRSNLAPVILQLKALGIDNVL 443
Query: 455 HFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYN 513
F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES +
Sbjct: 444 RFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNFG 503
Query: 514 CSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS 573
CS EILSI+AM+ + N FV P + A +F +GDHLT+LNVY A+ ++N++
Sbjct: 504 CSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQ 563
Query: 574 WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVA 633
WC ++F+N++ L A VR+QL +++ +F + S++ D + + +++G+F A
Sbjct: 564 WCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSE-GDPD---PVLRCIVSGFFANAA 619
Query: 634 HLERTGQYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
TG Y + ++L+ + K + VIYNE + TS+ ++R VT + WL+++
Sbjct: 620 RFHSTGAYSVILSPHSLYLYYLTLFNRKFLQKVIYNEVIQTSKYYMRDVTAIESAWLLEL 679
Query: 693 APHYY 697
APH+Y
Sbjct: 680 APHFY 684
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 1273 (453.2 bits), Expect = 2.4e-138, Sum P(2) = 2.4e-138
Identities = 267/638 (41%), Positives = 399/638 (62%)
Query: 31 GPGAMMNNNNSLINRWNGKPYSQRYYEIL---EKRKSLPVWQQKEEFLQVLKANQVIILV 87
GPG ++ + +G Y L ++R+ LPV++ + L +++ Q +++V
Sbjct: 17 GPGVSISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIV 76
Query: 88 GETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE 147
GETG GK+TQIPQ++ E T + R ++ TQP EE +G E
Sbjct: 77 GETGCGKSTQIPQYLAEAG--WTAEGR---VVGVTQPRRVAAVTVAGRVAEERGAVLGHE 131
Query: 148 VGYSIRFEDCSSA-RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGL 206
VGY IRF+DC+ T +K+LTDGML+RE M DPLL +Y VI+LDEAHERTL TD+ GL
Sbjct: 132 VGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGL 191
Query: 207 LKEVLKNRPDLKLVVMSATLEAEKFQGYFY----GAP------LMKVPGRLHPVEIFYTQ 256
LK++ K R DL+L+V SATL+A+KF+ +F P ++ V GR PV+IFY Q
Sbjct: 192 LKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Query: 257 EPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---V 313
P DY+++ + TVV+IH E GD+L FLTG+EE+E + ++ + + G +
Sbjct: 252 SPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALA-RTGMKRHL 310
Query: 314 KVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFA 373
+V+P+Y+ LP Q K+FE RK++V+TN+AETS+TI GIVYVID GF
Sbjct: 311 RVLPMYAGLPSFEQMKVFERVSRSV-------RKVIVATNVAETSITISGIVYVIDCGFV 363
Query: 374 KQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEI 433
K + YNPR +E L+V P+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T PE+
Sbjct: 364 KLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEM 422
Query: 434 LRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEK 492
RSNLA +L LK LGID+++ F FM PP +++++ALE+L LG LD D LTE +G +
Sbjct: 423 QRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMR 482
Query: 493 MSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHID 552
++EFPL+P +KML+ES + CS EILSI+AM+ + N FV P + A +F +
Sbjct: 483 IAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEE 542
Query: 553 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFN 612
GDHLT+LN+Y A+ ++N+D WC ++F+N++ L A VR+QL +++ +F + S++
Sbjct: 543 GDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSE-G 601
Query: 613 SRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVV 650
D + + +++G+F A TG Y + N+V+
Sbjct: 602 DPDL---VLRCIVSGFFANAARFHSTGAYRVIY-NEVI 635
Score = 102 (41.0 bits), Expect = 2.4e-138, Sum P(2) = 2.4e-138
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 665 VIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
VIYNE + TS+ ++R VT + WL+++APH+Y
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 661
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 1272 (452.8 bits), Expect = 3.1e-138, Sum P(2) = 3.1e-138
Identities = 271/646 (41%), Positives = 395/646 (61%)
Query: 23 KLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEIL---EKRKSLPVWQQKEEFLQVLK 79
K K GPG ++ + +G Y L ++R+ LPV++ + L +++
Sbjct: 9 KFWKPGTEGPGVSISEERQSVTENSGTTVIYNPYAALSIEQQRQKLPVFKLRNHILYLVE 68
Query: 80 ANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEE 139
Q +++VGETG GK+TQ+PQ++ E T + R ++ TQP +E
Sbjct: 69 NYQTVVIVGETGCGKSTQVPQYLAEAG--WTAEGR---VVGVTQPRRVAAVTVAGRVADE 123
Query: 140 MDVTIGEEVGYSIRFEDCSSA-RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTL 198
+G EVGY IRF+DC+ T +K+LTDGML+RE M DPLL +Y V++LDEAHERTL
Sbjct: 124 RGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTL 183
Query: 199 ATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY----GAP------LMKVPGRLH 248
TD+ GLLK++ K R DL+L+V SATL+AEKF+ +F P ++ V GR
Sbjct: 184 YTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTF 243
Query: 249 PVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGD 308
PV+IFY Q P DY++A + TVV+IH E GDIL FLTG+EE+E + ++ +
Sbjct: 244 PVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALA- 302
Query: 309 QVGPVK---VVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIV 365
+ G K V+P+Y+ LP Q K+FE RK++V+TN+AETS+TI GIV
Sbjct: 303 RTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSV-------RKVIVATNVAETSITISGIV 355
Query: 366 YVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDL 425
YVID GF K + YNPR +E L+V P+S+ASA+QR+GR GR + GKC+RLYTE++F L
Sbjct: 356 YVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQ-L 414
Query: 426 QPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN 485
T PE+ RSNLA VL LK LGID ++ F FM PP +++++ALE+L LG LD D
Sbjct: 415 PQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCR 474
Query: 486 LTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEA 544
LTE +G +++EFPL+P +KML+ES + CS EILSI+AM+ + N FV P + A
Sbjct: 475 LTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRV 534
Query: 545 KARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNL 604
+F +GDHLT+LNVY A+ ++N+ WC ++F+N++ L A VR QL +++ +F +
Sbjct: 535 HRKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQV 594
Query: 605 KLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVV 650
S++ D + + +++G+F A TG Y + N+V+
Sbjct: 595 PKMSSE-GDPD---PVLRCIVSGFFANAARFHSTGAYRVIY-NEVI 635
Score = 102 (41.0 bits), Expect = 3.1e-138, Sum P(2) = 3.1e-138
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 665 VIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
VIYNE + TS+ ++R VT + WL+++APH+Y
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 661
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 1349 (479.9 bits), Expect = 8.3e-138, P = 8.3e-138
Identities = 262/515 (50%), Positives = 361/515 (70%)
Query: 187 VIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGR 246
V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SAT++ +F +F GAP+ ++PGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGR 94
Query: 247 LHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNM 306
PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EEIE AC + +
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 307 GDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVY 366
G ++ + V+P+Y+ LP MQ +IF+ RK+VV+TNIAETSLTI+GI+Y
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVATNIAETSLTIEGIIY 207
Query: 367 VIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQ 426
V+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GKCFRLYT ++ ++L+
Sbjct: 208 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 267
Query: 427 PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNL 486
T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ ALE L LGAL+ G L
Sbjct: 268 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 327
Query: 487 TEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPREAQKAADEAK 545
T G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N F RP++ AD A+
Sbjct: 328 TTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNAR 387
Query: 546 ARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK 605
F GDHL LLNVY + ++ WCY+NFV R+++ A +VR+QL ++ R +
Sbjct: 388 VNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVG 447
Query: 606 L--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKP 662
L C D Y+ +RKA+ AGYF A L R+G Y TVK Q V +HP++ L + +P
Sbjct: 448 LSSCQGD------YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQP 500
Query: 663 EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 501 RWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 535
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 999 (356.7 bits), Expect = 3.5e-137, Sum P(2) = 3.5e-137
Identities = 211/514 (41%), Positives = 319/514 (62%)
Query: 213 NRPDLKLVVMSATLEAEKFQGYF-YG---------APLMKVPGRLHPVEIFYTQEPERDY 262
N LKL++ SATL A F +F Y + ++ + GR +PV+I Y +E +Y
Sbjct: 210 NDNSLKLIISSATLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEESTSNY 269
Query: 263 LEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITK--EITNM------GDQVGPV- 313
++ I+T++ IH +P GDILVFLTG+EEIE + + EI Q P
Sbjct: 270 IQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTLDDKFEILRQYHQQHHHQQQQPFM 329
Query: 314 --KVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 371
++P+YS L Q K+FE RKI++STNIAETS+TIDG+VYV+D G
Sbjct: 330 KYSLLPMYSGLSINKQIKVFESVGDSKKI-----RKIIISTNIAETSITIDGVVYVVDCG 384
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
F K K Y+ +ESL++ P SK+SA+QR+GRAGR++ GKC+RLYTE ++ L QT P
Sbjct: 385 FVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIP 444
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MG 490
EI RSNL NT+L LK LGID++++FDF+ P +L+R LEVL LGALDD+G LT G
Sbjct: 445 EIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRGLEVLYGLGALDDNGKLTNPTG 504
Query: 491 EKMSEFPLDPQMSKMLVESPK--YNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARF 548
M+EFP DP SKM+++S +NCS+E ++I+AML++ F + K+ +
Sbjct: 505 MIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNIQGLFTN--QNHKSRKHLLVK- 561
Query: 549 GHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKL-- 606
+GDHLTLLN+++++ N P WC + +N++A++ VR+QL+ ++++ +
Sbjct: 562 ---EGDHLTLLNIFNSFISNQSSPQWCNQHQINYKAMQRVLQVRKQLLAYAKKYSINVIS 618
Query: 607 CSNDFNSRDYYVN-IRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSN--CLDHKPE 663
C + N+R+ N IRKA+++G+F A L+ G Y T+++ + LHP++ CL + P+
Sbjct: 619 CFDSNNNREQCSNLIRKAIVSGFFTNAAQLQPDGSYQTIREKHKLWLHPTSVLCLSNSPQ 678
Query: 664 WVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
WVI+NE +T++ +++ VT + WL +IAPHYY
Sbjct: 679 WVIFNEVTITTKEYMKDVTSIEPNWLFEIAPHYY 712
Score = 365 (133.5 bits), Expect = 3.5e-137, Sum P(2) = 3.5e-137
Identities = 87/219 (39%), Positives = 128/219 (58%)
Query: 37 NNNNSLINRWNGKPY--------SQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVG 88
NNNNSL ++ + + S + I ++R SLP++Q ++ L +L+ ++++G
Sbjct: 19 NNNNSLFDKDSSLSFGNDNFIYNSNQKLTIQQQRISLPIYQNRKHILYLLEKYSTLVIIG 78
Query: 89 ETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEM-DVTIGEE 147
TG GK+TQIPQ++ E D R ++ CTQP +EM + +G+
Sbjct: 79 NTGCGKSTQIPQYLFES---GWSDGFRTIL--CTQPRRVAAISLAERVAQEMGEQHVGKT 133
Query: 148 VGYSIRFED-CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGL 206
VGYS+RF++ S T +KY+TDGML+RE M DPLL +Y VI++DEAHER+L TD+L GL
Sbjct: 134 VGYSVRFDEKISDIETRIKYVTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGL 193
Query: 207 LKEVLKNRPD----------LKLVVMSATLEAEKFQGYF 235
LK+V K R LKL++ SATL A F +F
Sbjct: 194 LKKVQKKRNSTNNNNNNDNSLKLIISSATLNANDFFNFF 232
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 1342 (477.5 bits), Expect = 4.6e-137, P = 4.6e-137
Identities = 261/515 (50%), Positives = 360/515 (69%)
Query: 187 VIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGR 246
V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SAT++ +F +F AP+ ++PGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGR 94
Query: 247 LHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNM 306
PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EEIE AC + +
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 307 GDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVY 366
G ++ + V+P+Y+ LP MQ +IF+ RK+VV+TNIAETSLTI+GI+Y
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVATNIAETSLTIEGIIY 207
Query: 367 VIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQ 426
V+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GKCFRLYT ++ ++L+
Sbjct: 208 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 267
Query: 427 PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNL 486
T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ ALE L LGAL+ G L
Sbjct: 268 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 327
Query: 487 TEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPREAQKAADEAK 545
T G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N F RP++ AD A+
Sbjct: 328 TTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNAR 387
Query: 546 ARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK 605
F GDHL LLNVY + ++ WCY+NFV R+++ A +VR+QL ++ R +
Sbjct: 388 VNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVG 447
Query: 606 L--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKP 662
L C D Y+ +RKA+ AGYF A L R+G Y TVK Q V +HP++ L + +P
Sbjct: 448 LSSCQGD------YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQP 500
Query: 663 EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
W++Y+E VLT++ F+R V ++ WL+++APHYY
Sbjct: 501 RWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 535
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 1339 (476.4 bits), Expect = 9.5e-137, P = 9.5e-137
Identities = 286/671 (42%), Positives = 422/671 (62%)
Query: 50 PYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE 109
PY+ E ++R+ LPV++ + L +++ Q +++VGETG GK+TQIPQ++ E
Sbjct: 33 PYAALSIE--QQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAG--W 88
Query: 110 TPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSA-RTVLKYLT 168
T + R ++ TQP EE +G EVGY IRF+DC+ T +K+LT
Sbjct: 89 TAEGR---VVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLT 145
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
DGML+RE M DPLL +Y I+LDEAHERTL TD+ GLLK++ + R DL+L+V SATL+A
Sbjct: 146 DGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDA 205
Query: 229 EKFQGYFY----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP 278
EKF+ +F P ++ V GR PV+IFY Q P DY+++ + TV++IH E
Sbjct: 206 EKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEG 265
Query: 279 SGDILVFLTGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIFEXXX 335
GDIL FLTG+EE+E + ++ +G + G ++V+P+Y+ LP Q K+FE
Sbjct: 266 DGDILAFLTGQEEVETVVSMLIEQARALG-RTGMKRHLRVLPMYAGLPSFEQMKVFERVS 324
Query: 336 XXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKA 395
RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V+P+S+A
Sbjct: 325 RSV-------RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQA 377
Query: 396 SAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLV 454
SA+QR+GRAGR++ GKC+RLYTE++F D PQ T PE+ RSNLA +L LK LGID+++
Sbjct: 378 SANQRAGRAGRSRSGKCYRLYTEEAF--DKLPQCTVPEMQRSNLAPVILQLKALGIDNVL 435
Query: 455 HFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYN 513
F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES +
Sbjct: 436 RFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNFG 495
Query: 514 CSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS 573
CS EILSI+AM+ + N FV P + A +F +GDHLT+LNVY A+ ++N++
Sbjct: 496 CSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQ 555
Query: 574 WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVA 633
WC ++F+N++ L A VR+QL +++ +F + S++ D + + +++G+F A
Sbjct: 556 WCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSE-GDPD---PVLRCIVSGFFANAA 611
Query: 634 HLERTGQY---LTVKDNQV-VHLHPSNCLDHKPEW---VIYNEYVLTSRNFIRTVTDVRG 686
TG Y L + VHL W VIYNE + TS+ ++R VT +
Sbjct: 612 RFHSTGAYSRTLAHSGREAQVHLFTVVPGTQSRYWGFRVIYNEVIQTSKYYMRDVTAIES 671
Query: 687 EWLIDIAPHYY 697
WL+++APH+Y
Sbjct: 672 AWLLELAPHFY 682
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 1333 (474.3 bits), Expect = 4.1e-136, P = 4.1e-136
Identities = 284/715 (39%), Positives = 449/715 (62%)
Query: 7 RKVSLFDVVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKP------YSQRYYEILE 60
R++++ + + ++ + ++ T +G + NNN ++ N K ++ +I
Sbjct: 288 RRINM-EHIQQSRDNTTVLNT-AMGEVLGLENNNKAKDKSNQKICDDTALFTPSKDDIKH 345
Query: 61 KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIA 120
++ LPV++ + + L +++ NQV++++GETGSGKTTQ+ Q++ E + DR + +++
Sbjct: 346 TKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYE--EGYANDRGKSIVV- 402
Query: 121 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSAR-TVLKYLTDGMLLREAMTD 179
TQP EM V +G+EVGYSIRFED + + T LK++TDG+LLRE + D
Sbjct: 403 -TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLD 461
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
L++Y +++DEAHER+L TD+L G K +L R DLKL++ SAT+ A+KF +F AP
Sbjct: 462 DTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAP 521
Query: 240 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP--SGDILVFLTGEEEIE---D 294
+PGR PV+ YT P +DY+EAA+ V+IH+ SGDIL+F+TG+E+IE D
Sbjct: 522 QFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFD 581
Query: 295 ACRK-----ITKEI-TNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKI 348
++ +K+ T +++ ++++P+YS LP +Q KIF+ RKI
Sbjct: 582 TLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTK-------RKI 634
Query: 349 VVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQ 408
+++TNIAETSLTI GI YVID G++K KVYNP++ ++SL+++PISKA+A QRSGRAGRT
Sbjct: 635 IIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTA 694
Query: 409 PGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGI-DDLVHFDFMDPPAPETL 467
PG +RLYTE +F D+ QT PEI R+NL+NT+L LK L + D+L F F+D P +T
Sbjct: 695 PGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTF 754
Query: 468 MRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV 527
+ +L L ++GA+D G LT +G +M++FPL P +SK+L+ + + CS+E+L+I +MLSV
Sbjct: 755 LSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSV 814
Query: 528 PNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKS 587
P F RP+E QK AD A+ +F DHLTLLNV+ ++ NN WC +FV +++L
Sbjct: 815 PQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVR 874
Query: 588 ADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDN 647
A ++R QL+ I+ + + S+ +D+ + I+K + +G+ Q A + Y+ +K
Sbjct: 875 ARDIRDQLLTILKSQKIPVISS---GKDWDI-IKKCICSGFAHQAAKITGLRNYVHLKTG 930
Query: 648 QVVHLHPSNCLD---HKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
V LHP++ L P +V+Y+E ++TS+ +I VT V WL++ YD+
Sbjct: 931 VSVQLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDI 985
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 1321 (470.1 bits), Expect = 7.7e-135, P = 7.7e-135
Identities = 262/597 (43%), Positives = 388/597 (64%)
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSA-RTVLKYLTDGMLLREA 176
++ TQP EE +G EVGY IRF+DC+ T +K+LTDGML+RE
Sbjct: 71 VVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREM 130
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 236
M DPLL +Y VI+LDEAHERTL TD+ GLLK++ K R DL+L+V SATL+A+KF+ +F
Sbjct: 131 MVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFN 190
Query: 237 ----GAP------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFL 286
P ++ V GR PV+IFY Q P DY+++ + TVV+IH E GD+L FL
Sbjct: 191 QNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFL 250
Query: 287 TGEEEIEDACRKITKEITNMGDQVGP---VKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 343
TG+EE+E + ++ + + G ++V+P+Y+ LP Q K+FE
Sbjct: 251 TGQEEVETVVSMLIEQARALA-RTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV----- 304
Query: 344 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 403
RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P+S+ASA+QR+GR
Sbjct: 305 --RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGR 362
Query: 404 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 463
GR++ GKC+RLYTE++F+ L T PE+ RSNLA +L LK LGID+++ F FM PP
Sbjct: 363 GGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPP 421
Query: 464 PETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
+++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES + CS EILSI+
Sbjct: 422 AQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIA 481
Query: 523 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNH 582
AM+ + N FV P + A +F +GDHLT+LN+Y A+ ++N+D WC ++F+N+
Sbjct: 482 AMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNY 541
Query: 583 RALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYL 642
+ L A VR+QL +++ +F + S++ D + + +++G+F A TG Y
Sbjct: 542 KGLVRAATVREQLKKLLVKFQVPRKSSE-GDPDL---VLRCIVSGFFANAARFHSTGAYR 597
Query: 643 TVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
T++D+ +H+HP++ L + P WVIYNE + TS+ ++R VT + WL+++APH+Y
Sbjct: 598 TIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 654
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 967 (345.5 bits), Expect = 1.6e-134, Sum P(2) = 1.6e-134
Identities = 217/513 (42%), Positives = 310/513 (60%)
Query: 205 GLLK--EVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDY 262
G+LK + K P LKL++MSA+L+A F YF GA + V GR PV+I YT PE DY
Sbjct: 216 GVLKGYQGRKLSP-LKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDY 274
Query: 263 LEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTL 322
++A + T+ QIH E GDILVFLTG++EIE R + + + N+ + + + ++S L
Sbjct: 275 VDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSAL 334
Query: 323 PPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRV 382
P Q K+F RK++++TNIAETS+TI GI YVIDPGF K + Y+P
Sbjct: 335 PSEQQMKVF-------APAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSK 387
Query: 383 RVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTV 442
+ESL V P SKA QRSGRAGR PGK FRLY E+ F L+ T PEI R NL+N +
Sbjct: 388 GMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEK-LEDSTKPEIKRCNLSNII 446
Query: 443 LTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQ 501
L LK LGIDD+V FDF+D P+ +++AL L+ LGAL DDG L +G +MS PL+P
Sbjct: 447 LQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPV 506
Query: 502 MSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNV 561
SK L+ + ++NC E+L A+LSV + F PRE ++ A +K F ++GDHLT L+V
Sbjct: 507 YSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSV 566
Query: 562 YH-----------AYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVRIMAR--FNLK 605
Y A NN D WC +N+VN R+LK A ++ +Q+ + + FN+
Sbjct: 567 YRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVS 626
Query: 606 LCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDH-KPEW 664
C ND + R+ + A +F++ A + G Y ++ +VVH+HP++ L KPE
Sbjct: 627 SCGNDM------LAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKPEC 680
Query: 665 VIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
VI+NE + TS+ +I+ +T + WL ++APH++
Sbjct: 681 VIFNELMQTSKKYIKNLTIIDSLWLSELAPHHF 713
Score = 372 (136.0 bits), Expect = 1.6e-134, Sum P(2) = 1.6e-134
Identities = 76/165 (46%), Positives = 108/165 (65%)
Query: 50 PYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE 109
P+S R +I E R+SLP+ ++ ++ ++ N ++I+VGETGSGKTTQ+PQF+
Sbjct: 27 PFSMRQ-KIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFC- 84
Query: 110 TPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTD 169
R MI TQP EE +V +G++VGYSIRF+D +S T LKY+TD
Sbjct: 85 ----REGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTD 140
Query: 170 GMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNR 214
G+LLREA+ DP L RY VI++DEAH+R++ TDVL LLK++ + R
Sbjct: 141 GLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTR 185
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 1315 (468.0 bits), Expect = 3.3e-134, P = 3.3e-134
Identities = 281/652 (43%), Positives = 408/652 (62%)
Query: 61 KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLE-GVDIETPDRRRKMMI 119
+R+ LP++Q + L L+ + +L+GETGSGKTTQIPQ++ E G+ R+ +I
Sbjct: 20 QRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIG-------RQGII 72
Query: 120 ACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTD 179
A TQP +E +G+ VGY++RF+D +S T +K+LTDGMLLREA+ D
Sbjct: 73 AVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGD 132
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-----KLVVMSATLEAEKFQGY 234
P+L +Y V++LDEAHERT+ TDVLFG++K K R +L K++VMSAT++ ++F Y
Sbjct: 133 PILRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQY 192
Query: 235 FYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSG-DILVFLTGEEEIE 293
F GAP++ + GR HP+++FYT++P+ DYL+AA+ +V QIH PS DILVFLTG+EEIE
Sbjct: 193 FNGAPVLYLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPSSQDILVFLTGQEEIE 252
Query: 294 DACRKITKEIT-NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVST 352
A K ++I ++ D + V+PLY++LP + Q ++F+ RK+++ST
Sbjct: 253 -AMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGC-------RKVILST 304
Query: 353 NIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKC 412
NIAETS+TI GI YV+D G K K YNP + +E L V +SKA A QR+GRAGR G C
Sbjct: 305 NIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGREDSGIC 364
Query: 413 FRLYTEKSFNNDLQPQTYPEI---LRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMR 469
+RLYTE F T PEI R NLA+ +L L L I +++ FDFM P+P+ +
Sbjct: 365 YRLYTEDEFEK-FDKMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFMSKPSPDAIQA 423
Query: 470 ALEVLNYLGALD---DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 526
A+E L+ LGA++ D LT +G KM+ FPL+P+ SK ++ SPK++C+ EIL+I ++LS
Sbjct: 424 AIEQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLS 483
Query: 527 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALK 586
V + P + + +F +GDHLTLLNVY A+K + + WC +NFVN R +
Sbjct: 484 VDSVLYNPPARRDEVQSVRKKFISSEGDHLTLLNVYRAFKNVSGNKEWCKENFVNGRNMM 543
Query: 587 SADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKD 646
+VR QL I + ++ + S SR NIR+ + FM A L+ G Y TV
Sbjct: 544 LVSDVRAQLRDICVKLSMPMES----SRSDTANIRRCLAHSLFMNAAELQPDGTYSTVNS 599
Query: 647 NQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
+Q+V +HPS+ L H KP V+YN + T++ ++R + V EWL D AP Y+
Sbjct: 600 HQLVAIHPSSVLFHCKPSCVVYNGLLHTNKCYMRDLCVVDAEWLYDAAPDYF 651
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 1313 (467.3 bits), Expect = 5.4e-134, P = 5.4e-134
Identities = 270/677 (39%), Positives = 422/677 (62%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
+N ++G PYS RYY++L++R+ LP+W++K F++ L +Q++I+ G+ GK++Q+PQ+
Sbjct: 40 LNPFDGLPYSSRYYKLLKEREDLPIWKEKYSFMEKLLQSQIVIVSGDAKCGKSSQVPQWC 99
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
E + D R ++ CTQ +EMDV IG EVGY I FE+C ++ T
Sbjct: 100 AEYC--LSIDYRHGGVV-CTQVHKPTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSET 156
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+L+Y TD ML RE M++P L Y VI+LD+ HER++ATDVL GLLK+VL RP+LKL++
Sbjct: 157 ILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSMATDVLLGLLKDVLLARPELKLIIN 216
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
S+ K Y+ PL++V + HPVE Y +++ E+ +R + +IH GDI
Sbjct: 217 SSPHLINKLSSYYGNVPLIQVKNK-HPVEAVYLSGAQKESFESILRLIFEIHHSGEKGDI 275
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 342
+VFL E++IE A + +E +N+ +G + VVPLY P + +F+
Sbjct: 276 VVFLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY----PKEKCALFKPNDETEKRCP 331
Query: 343 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
R++V++ + E+ + + + +VID G ++KVYNPR+R +SL+ PIS++ A R
Sbjct: 332 VYQRRVVLTASSGESLICSNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQ 391
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
+ GK F LY+E+ + D+QP E+ +NL + VL +K++ I L H DFM+ P
Sbjct: 392 ILSASPSGKLFCLYSEEFASRDMQPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRP 451
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
APE+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+
Sbjct: 452 APESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIA 511
Query: 523 AMLSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-------W 574
AM++ PNCF PR A++AA F H DGDH TL+N+Y AY+ + + W
Sbjct: 512 AMVTAPNCFSHLPRGAEEAALSCWKTFLHPDGDHFTLINIYKAYQDMTLNAASEHCVEKW 571
Query: 575 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 634
C+D F+N AL++A+ +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A
Sbjct: 572 CHDYFLNCSALRTAEVIRAELLEIIKRIELPYTEPAFGSKENTLNIKKALLSGYFMQIAR 631
Query: 635 -LERTGQYLTVKDNQVVHLHPSNCLD--HK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
++ G YL + QV LHP +C K PEWV+++++ + + N+IRT +++ E +
Sbjct: 632 DVDGAGNYLMLTHKQVAQLHPLSCYSVARKMPEWVLFHKFSIANNNYIRTASEIAPELFM 691
Query: 691 DIAPHYYDLSNFPQCEA 707
+AP YY SN P E+
Sbjct: 692 QLAPQYY-FSNLPPSES 707
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 1301 (463.0 bits), Expect = 1.0e-132, P = 1.0e-132
Identities = 270/677 (39%), Positives = 417/677 (61%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
+N ++G PYS RYY++L++R+ LP+W++K F++ L NQ++I+ G+ GK++Q+PQ+
Sbjct: 40 LNPFDGLPYSSRYYKLLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWC 99
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
E + + CTQ +EMDV IG EVGY I FE+C S+ T
Sbjct: 100 AEYC---LSIHYQHGGVVCTQVHKPTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSET 156
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+L+Y TD ML RE M+ P L Y VI+LD+ HER++ATDVL GLLK+VL RP+LKL++
Sbjct: 157 ILRYCTDDMLQREMMSSPFLGNYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIIN 216
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
S+ K Y+ PL++V + HPVE+ Y +++ LE+ +R + +IH GDI
Sbjct: 217 SSPHLISKLSSYYGNVPLIEVK-KQHPVEVVYLSGAQKESLESILRLIFEIHQSGEKGDI 275
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 342
+VFL E++IE A + +E +N+ +G + VVPLY P + +F+
Sbjct: 276 VVFLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY----PKEKCALFKPNDETEKRCQ 331
Query: 343 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
R++V++ + E+ + + + +VID G ++KVYNPR+R SL+ PIS++ A R
Sbjct: 332 VYQRRVVLTASSGESLIWSNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQ 391
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
G + GK F LY+E+ + D++P E+ +NL + VL +K++ I L H DFM+ P
Sbjct: 392 ILGSSSSGKLFCLYSEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRP 451
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
APE+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C E+L+I+
Sbjct: 452 APESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVEEMLTIA 511
Query: 523 AMLSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ----NNED---PSW 574
AM++ PNCF P A++AA F H +GDH TL+N+Y AY+ + D W
Sbjct: 512 AMVTAPNCFSNLPHGAEEAALTCWKTFLHPEGDHFTLINIYKAYQDIALNSTSDHCVEKW 571
Query: 575 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 634
C+D F+N AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A
Sbjct: 572 CHDYFLNCCALRMADVIRAELLEIVKRIELPCAEPAFGSKENALNIKKALLSGYFMQIAR 631
Query: 635 -LERTGQYLTVKDNQVVHLHP--SNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
++ +G YL + QV LHP S + K PEWV+++++ ++ N+IR +++ E +
Sbjct: 632 DVDGSGNYLMLTHKQVAQLHPLSSYSITKKMPEWVLFHKFSISENNYIRITSEISPELFM 691
Query: 691 DIAPHYYDLSNFPQCEA 707
+AP YY SN P E+
Sbjct: 692 QLAPPYY-FSNLPPSES 707
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 1299 (462.3 bits), Expect = 1.6e-132, P = 1.6e-132
Identities = 269/677 (39%), Positives = 416/677 (61%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
+N ++G PYS RYY++L++R+ LP+W++K F++ L NQV+++ G++ GK++Q+PQ+
Sbjct: 40 LNPFDGLPYSSRYYKLLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWC 99
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
E + + CTQ +EMDV IG EVGY I FE+C + T
Sbjct: 100 AEYC---LSIHYQHGGVICTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTET 156
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+L+Y TD ML RE M++P L Y VI+LD+ HER+LATDVL GLLK+VL RP+LKL+V
Sbjct: 157 ILRYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVN 216
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
+ L K Y+ P+++V + HPVE+ Y ++D E+ IR + +IH GD+
Sbjct: 217 CSPLLTSKLSSYYGDVPVIEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDV 275
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 342
+VFL E++IE + +E +N+ VG + V+PLY P + +F
Sbjct: 276 VVFLACEQDIEKTYELVCQEGSNLNPDVGDLVVIPLY----PKEKCSLFRPVDETEKRCQ 331
Query: 343 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
R++V++T+ E+ + + +VID G +++VYNPR+R SL++ PIS++ A R
Sbjct: 332 VYQRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQ 391
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
G + GK F LYTE+ + D++P E+ +NL + VL +K++ I L DFM+ P
Sbjct: 392 LLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRP 451
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
APE+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+
Sbjct: 452 APESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIA 511
Query: 523 AMLSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN-----NED--PSW 574
AM++ P+CF+ P A++AA F H +GDH TL+NVY+AY+ NE W
Sbjct: 512 AMVTAPSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMW 571
Query: 575 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 634
C+D F++ AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A
Sbjct: 572 CHDCFLSCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIAR 631
Query: 635 -LERTGQYLTVKDNQVVHLHP--SNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
++ +G YL + QV LHP S + K PEWV+++++ ++ N+IR + V E +
Sbjct: 632 DVDGSGNYLMLTHKQVAQLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFM 691
Query: 691 DIAPHYYDLSNFPQCEA 707
+ P YY SN P E+
Sbjct: 692 QLVPQYY-FSNLPPSES 707
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 1295 (460.9 bits), Expect = 4.4e-132, P = 4.4e-132
Identities = 285/678 (42%), Positives = 424/678 (62%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLE-GVDIETPD 112
++ +I ++RKSLP + + + L ++ NQV I++GETGSGKTTQ+ QF+ E G
Sbjct: 347 KHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDK 406
Query: 113 RRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFED-CSSARTVLKYLTDGM 171
K +IACTQP EEM+ +GEEVGYSIRFED + +TV+KY+T+G+
Sbjct: 407 NGEKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGI 466
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLRE + DP+L Y I++DEAHER+L TD+L GL K +L R DLKL+V SAT+ A +F
Sbjct: 467 LLREILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRF 526
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCE--------PSGDIL 283
+F AP +PGR PVE+F+ ++ DY+E A++ V+ IH+ GDIL
Sbjct: 527 TKFFGVAPQFHIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLGRWNADNNNANDGDIL 586
Query: 284 VFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 343
VF+TG+E+IE C I KE N+ + P+ + P+YST+P +Q+KIF
Sbjct: 587 VFMTGQEDIEITCDLI-KEKLNLLEDPPPLDIFPIYSTMPQDLQKKIFNKTNLQR----- 640
Query: 344 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 403
RK+VV+TNIAETSLT+DGI YVID G K KVYNP++ +++L V PIS A+A QRSGR
Sbjct: 641 --RKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGR 698
Query: 404 AGRTQPGKCFRLYTEKSFNND-LQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
AGRT G +RLYTEK+ D + Q PEI RSNL+N +L LK L ++D+ F F+DPP
Sbjct: 699 AGRTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPP 758
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVES--PKYNCSNEILS 520
+ L +L L +GALD+ G LT++G M++FP++P ++K+++ S P+++CS E+++
Sbjct: 759 PKDLLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVT 818
Query: 521 ISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN-NEDP------- 572
I AMLSVPN F RP+E AD A+ +F + DHLTLLNV++ + N N+
Sbjct: 819 IVAMLSVPNIFNRPKERANEADMAREKFIISESDHLTLLNVFNQWNINLNKFKGNYTKIN 878
Query: 573 SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQV 632
+WC NF+ ++L A +++ QL+ IM + L + + + +IRK + A ++ Q
Sbjct: 879 NWCNKNFLQLKSLYRAKDIKHQLMLIMKKNKLAILKSKTDD-----DIRKCLCASFYQQS 933
Query: 633 AHLER---TGQ--YLTVKDNQV-VHLHP-SNCLDHK--PEWVIYNEYVLTSRNFIRTVTD 683
A L + GQ ++ ++ + + + LHP S+ LD +VIY+E VLT + ++ VT
Sbjct: 934 AKLTKMNLNGQPEFVNLRHSYMKMFLHPTSSLLDSNLSTNYVIYHELVLTKKEYMNCVTT 993
Query: 684 VRGEWLIDIAPHYYDLSN 701
V WL++ ++ +++
Sbjct: 994 VDPIWLLEYGYKFFGVAD 1011
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
Identities = 282/661 (42%), Positives = 404/661 (61%)
Query: 49 KPYSQRYYEILEK-RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVD 107
+P + Y E +E+ R++LP++Q + + L L+ +L+GETGSGKTTQIPQ++ EG
Sbjct: 64 QPSASPYPEAVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEG-- 121
Query: 108 IETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYL 167
R+ +IA TQP +E +G+ VGY++RF+D +S T +K+L
Sbjct: 122 ----GIGRQAIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFL 177
Query: 168 TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-----KLVVM 222
TDGMLLREA++D LL +Y I+LDEAHERTL TDVLFG++K K R +L K++VM
Sbjct: 178 TDGMLLREAISDCLLRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVM 237
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSG-D 281
SAT++ + F YF GAP++ + GR HP++IFYT++P+ DYL AA+ +V QIH PS D
Sbjct: 238 SATMDVDLFSQYFNGAPVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPSSHD 297
Query: 282 ILVFLTGEEEIEDACRKITKEIT-NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXX 340
ILVFLTG+EEIE A K ++I ++ D + V+PLY++LP A Q ++F+
Sbjct: 298 ILVFLTGQEEIE-AMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGY-- 354
Query: 341 XXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 400
RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK A QR
Sbjct: 355 -----RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 409
Query: 401 SGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMD 460
+GRAGR G C+RLYTE F + T PEI R NLA+ +L L + I +++ FDFM
Sbjct: 410 TGRAGREDSGICYRLYTEDEFEK-FEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMS 468
Query: 461 PPAPETLMRALEVLNYLGALDD-DGNLT--EMGEKMSEFPLDPQMSKMLVESPKYNCSNE 517
P+P+ + A+ L LGAL+ DG LT MG KM+ FPL+P+ +K ++ SPK++C+ E
Sbjct: 469 KPSPDHIQAAIAQLELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEE 528
Query: 518 ILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYD 577
IL+I A+LSV + P + + +F +GDHLTLLNVY +K + WC +
Sbjct: 529 ILTIVALLSVDSILYNPPSRRDEVQSVRKKFVSSEGDHLTLLNVYRTFKNTGGNKEWCKE 588
Query: 578 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
NFVN + + VR QL I + ++ + S SR +IR+ + F A L+
Sbjct: 589 NFVNSKNMMLVAEVRAQLRDICIKMSMPIVS----SRGDTESIRRCLAHSLFTSTAELQP 644
Query: 638 TGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 696
G Y T +Q V +HPS+ L H KP V+Y E + TS+ ++R + V EWL + AP +
Sbjct: 645 DGSYATTDTHQPVAIHPSSVLFHCKPACVVYTELLFTSKCYMRDLCVVDAEWLYEAAPDF 704
Query: 697 Y 697
+
Sbjct: 705 F 705
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 1293 (460.2 bits), Expect = 7.1e-132, P = 7.1e-132
Identities = 267/677 (39%), Positives = 414/677 (61%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
+N ++G PYS RYY++L++R+ LP+W++K F++ L NQ++I+ G+ GK+ Q+PQ+
Sbjct: 40 LNPFDGLPYSSRYYKLLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWC 99
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
E + + CTQ +EMDV IG EVGY I FE+C + T
Sbjct: 100 AEYC---LSIHYQHGGVICTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNET 156
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+L+Y TD ML RE M++P L Y VI+LD+ HER++ATDVL GLLK+VL RP+LKL++
Sbjct: 157 ILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIIN 216
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
S+ K Y+ P+++V + HPVE+ Y E ++D E+ +R + +IH GDI
Sbjct: 217 SSPHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDI 275
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 342
+VFL E++IE C + + +N+ +G + VVPLY P + +F+
Sbjct: 276 VVFLACEQDIEKVCETVYQG-SNLNPDLGELVVVPLY----PKEKCSLFKPLDETEKRCQ 330
Query: 343 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
R++V++T+ E + + + +VID G ++KVYNPR+R SL++ PIS++ A R
Sbjct: 331 VYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQ 390
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
G + GK F LYTE+ + D+ P E+ +NL + VL +K++ I L H DFM+ P
Sbjct: 391 ILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRP 450
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
APE+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+
Sbjct: 451 APESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIA 510
Query: 523 AMLSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-------W 574
AM++ PNCF P A++AA F H +GDH TL+++Y AY+ + S W
Sbjct: 511 AMVTAPNCFSHVPHGAEEAALTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKW 570
Query: 575 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 634
C D F+N AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A
Sbjct: 571 CRDYFLNCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIAR 630
Query: 635 -LERTGQYLTVKDNQVVHLHPSN--CLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
++ +G YL + QV LHP + + K PEWV+++++ ++ N+IR +++ E +
Sbjct: 631 DVDGSGNYLMLTHKQVAQLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFM 690
Query: 691 DIAPHYYDLSNFPQCEA 707
+ P YY SN P E+
Sbjct: 691 QLVPQYY-FSNLPPSES 706
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
Identities = 275/661 (41%), Positives = 406/661 (61%)
Query: 49 KPYSQRYYEILE-KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVD 107
+P + Y E +E +R+SLP++Q + + L L+ +L+GETGSGKTTQIPQ++ EG
Sbjct: 57 QPSASPYPEAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG-G 115
Query: 108 IETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYL 167
I R+ +IA TQP +E +G+ VGY++RF+D +S T +K+L
Sbjct: 116 IS-----RQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFL 170
Query: 168 TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-----KLVVM 222
TDGMLLREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R +L K++VM
Sbjct: 171 TDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVM 230
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSG-D 281
SAT++ + F YF GAP++ + GR HP+++FYT++P+ DYL AA+ +V QIH PS D
Sbjct: 231 SATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQD 290
Query: 282 ILVFLTGEEEIEDACRKITKEIT-NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXX 340
ILVFLTG+EEIE A K ++I ++ D + V+PLY++LP A Q ++F+
Sbjct: 291 ILVFLTGQEEIE-AMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGY-- 347
Query: 341 XXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 400
RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK A QR
Sbjct: 348 -----RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 402
Query: 401 SGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMD 460
+GRAGR G C+RLYTE F T PEI R NLA+ +L L + + +++ FDFM
Sbjct: 403 TGRAGREDSGICYRLYTEDEFEK-FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMS 461
Query: 461 PPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNE 517
P+P+ + A+ L+ LGAL DD LT MG KM+ FPL+P+ +K ++ SPK++C+ E
Sbjct: 462 KPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEE 521
Query: 518 ILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYD 577
IL+I ++LSV + P ++ + +F +GDH+TLLN+Y +K + WC +
Sbjct: 522 ILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKE 581
Query: 578 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
NFVN + + VR QL I + ++ + S SR ++R+ + FM A L+
Sbjct: 582 NFVNSKNMTLVAEVRAQLRDICLKMSMPIAS----SRGDVESVRRCLAHSLFMSTAELQP 637
Query: 638 TGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 696
G Y T +Q V +HPS+ L H KP V+Y E + T++ ++R + + +WL + AP Y
Sbjct: 638 DGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEY 697
Query: 697 Y 697
+
Sbjct: 698 F 698
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
Identities = 264/677 (38%), Positives = 416/677 (61%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
+N ++G PYS RYY++L++R+ LP+W++K F++ L NQV+++ G++ GK++Q+PQ+
Sbjct: 47 LNPFDGLPYSSRYYKLLKEREELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVPQWC 106
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
E + + CTQ +EMDV IG EVGY I FE+C + T
Sbjct: 107 AEYC---LSIHYQHGGVICTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTET 163
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+L+Y TD ML RE M++P L Y VI+LD+ HER+LATDVL GLLK+VL RP+LKL++
Sbjct: 164 ILRYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIIN 223
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
+ + Y+ PL++V + HPVE+ Y ++D E+ +R + +IH GD+
Sbjct: 224 CSPFLISRLSSYYGNVPLLEVRNK-HPVEVVYLSGAQKDPFESVVRLIFEIHRSGEQGDV 282
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 342
+VFL E++IE + +E +N+ VG + V+PLY P + +F
Sbjct: 283 VVFLACEQDIEKTYEIVCQEGSNLNPDVGELVVIPLY----PKEKCSLFRPVDETEKRCQ 338
Query: 343 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
R++V++T+ E+ + + +VID G +++VYNPR+R SL++ PIS++ A R
Sbjct: 339 ASQRRVVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQ 398
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
G + GK F LYTE+ + D++P E+ +NL + VL +K++ I L DFM+ P
Sbjct: 399 LLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRP 458
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
APE+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+
Sbjct: 459 APESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIA 518
Query: 523 AMLSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN-----NED--PSW 574
AM++ P+CF+ P A++AA F H +GDH TL+N+Y+AY+ NE +W
Sbjct: 519 AMVTAPSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINIYNAYQDTVLNSANEHCVETW 578
Query: 575 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 634
C++ F++ AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A
Sbjct: 579 CHNCFLSCSALRMADVIRAELLEIIKRIELPYAEPAFGSQENGLNIKKALLSGYFMQIAR 638
Query: 635 -LERTGQYLTVKDNQVVHLHP--SNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
++ +G YL + QV LHP S + K PEWV+++++ ++ N+IR + V E +
Sbjct: 639 DVDGSGNYLMLTHKQVAQLHPLSSYAITKKMPEWVLFHQFSISENNYIRVTSAVSPELFM 698
Query: 691 DIAPHYYDLSNFPQCEA 707
+ P YY SN P E+
Sbjct: 699 QLVPQYY-FSNLPPSES 714
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 1285 (457.4 bits), Expect = 5.0e-131, P = 5.0e-131
Identities = 271/668 (40%), Positives = 408/668 (61%)
Query: 47 NGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGV 106
+ PY+ I ++R LP+++ + L + + + II+VGETG GK+TQ+PQF+LE
Sbjct: 61 HNNPYAS--LNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAG 118
Query: 107 DIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKY 166
D R+ I TQP EE D +G +VGY++RF+D S T +K+
Sbjct: 119 --WAADGRQ---IVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKF 173
Query: 167 LTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATL 226
+TDG+LLRE + DPLL +Y +I++DEAHER+ TD+L GLL+++++ R DL+++V SATL
Sbjct: 174 MTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATL 233
Query: 227 EAEKFQGYFY----G------APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 276
+AE F+ +F G A ++ V GR HPV + +T+ DY ++A+ TV+ IH
Sbjct: 234 DAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKH 293
Query: 277 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXX 336
E GDILVFLTG++E+ED C K+ +E+ + VVP Y LP Q K F+
Sbjct: 294 ENPGDILVFLTGQDEVEDVCEKL-RELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPH 352
Query: 337 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
RK+VV+TNIAE S+TI GI YVID G+ K + + VE+L+ +SKAS
Sbjct: 353 GT-------RKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKAS 405
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QR+GRAGR +PGKC+RLY E F + T PEI R +A+T+L LK LG+ ++ F
Sbjct: 406 AEQRAGRAGRIRPGKCYRLYPESEFERFAEG-TVPEIQRCQMASTILQLKALGVQNVHRF 464
Query: 457 DFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCS 515
++ PP ++ LE+L LGA+D+ LT +G +M+EFPL P SK L++S ++ CS
Sbjct: 465 HYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCS 524
Query: 516 NEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWC 575
E+++I AM+ + + F+ P + AD + +F +GDH+T+LNV+ + +N WC
Sbjct: 525 TEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWC 584
Query: 576 YDNFVNHRALKSADNVRQQLVRIMARFNLKLCSND--FNSRDYYVNIRKAMLAGYFMQVA 633
D+FVN+R L ADNVR QLVR++ RF ++ S+ N + NIR+ ++ G+F Q A
Sbjct: 585 SDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSE---NIRQCLVTGFFSQAA 641
Query: 634 HLERTGQYLTVKDNQVVHLHPSNCLDHK---PEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
TG+Y+TVK++ +++ + + K P+WVI+ E + S IR VT + EWL
Sbjct: 642 QYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVMQDS---IRDVTVIEPEWLY 698
Query: 691 DIAPHYYD 698
++APHYY+
Sbjct: 699 ELAPHYYE 706
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 1272 (452.8 bits), Expect = 1.2e-129, P = 1.2e-129
Identities = 275/661 (41%), Positives = 404/661 (61%)
Query: 49 KPYSQRYYEILE-KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVD 107
+P + Y E LE +R+SLP+++ + + L L+ +L+GETGSGKTTQIPQ++ EG
Sbjct: 48 QPSASPYREALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG-G 106
Query: 108 IETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYL 167
I R+ +IA TQP +E +G+ VGY++RFED +S T +K+L
Sbjct: 107 IS-----RQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFL 161
Query: 168 TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL-----KLVVM 222
TDGMLLREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R +L K++VM
Sbjct: 162 TDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVM 221
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGD 281
SAT++ + F YF AP++ + GR HP++IFYT++P++DYL AA+ +V QIH P S D
Sbjct: 222 SATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQD 281
Query: 282 ILVFLTGEEEIEDACRKITKEIT-NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXX 340
ILVFLTG+EEIE A K ++I ++ D + V+PLY++LP + Q ++F+
Sbjct: 282 ILVFLTGQEEIE-AMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGY-- 338
Query: 341 XXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 400
RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK A QR
Sbjct: 339 -----RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 393
Query: 401 SGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMD 460
+GRAGR G C+RLYTE F + T PEI R NLA+ +L L + + +++ FDFM
Sbjct: 394 TGRAGREDSGICYRLYTEDEFEK-FEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMS 452
Query: 461 PPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNE 517
P+P+ + A+ L+ LGAL DD LT +G KM+ FPL+P+ +K ++ S K++C+ E
Sbjct: 453 KPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEE 512
Query: 518 ILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYD 577
IL+I ++LSV + P + + +F +GDH+TLLN+Y +K + WC +
Sbjct: 513 ILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKE 572
Query: 578 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
NFVN + + VR QL I + ++ + S SR ++R+ M FM A L+
Sbjct: 573 NFVNSKNMLLVAEVRAQLREICLKMSMPIMS----SRGDMESVRRCMAHSLFMNTAELQT 628
Query: 638 TGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 696
G Y T +Q V +HPS+ L H KP V+Y + T++ ++R + V EWL + AP Y
Sbjct: 629 DGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDY 688
Query: 697 Y 697
+
Sbjct: 689 F 689
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 1264 (450.0 bits), Expect = 8.4e-129, P = 8.4e-129
Identities = 263/678 (38%), Positives = 414/678 (61%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
+N ++G PYS RYY++L++R+ LP+W++K F++ L +QV+I+ G+ GK++Q+PQ+
Sbjct: 40 LNPFDGLPYSSRYYKLLKEREDLPIWKEKYSFMENLLQSQVVIVSGDATCGKSSQVPQWC 99
Query: 103 LEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART 162
E + + CTQ +EMDV IG EVGY I FE+C ++ T
Sbjct: 100 AEYC---LSIHYQHGGVVCTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSET 156
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+L+Y TD ML RE M++P L Y VI+LD+ ER++ATDVL GLLK+VL RP+LKL++
Sbjct: 157 ILRYCTDDMLQREMMSNPFLGSYGVIILDDVQERSIATDVLLGLLKDVLLARPELKLIIN 216
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
S+ Y+ PL++V + PVE+ Y +++ LEA +R + +IH GDI
Sbjct: 217 SSPHLISTLSSYYGNVPLIEVTSK-RPVEVVYLSGAQKEALEAVLRLIFEIHHSGEEGDI 275
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 342
+VFL E++IE A + +E TN+ +G + VVPLY P + +F+
Sbjct: 276 VVFLACEQDIEKAYEIVCQEGTNLNPDLGELVVVPLY----PKEKCALFKPNDEAEKRCQ 331
Query: 343 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQK-VYNPRVRVESLLVSPISKASAHQRS 401
R++V++ + E+ + + + +VID G ++K VY+PR+R +SL++ PIS++ A R
Sbjct: 332 VYQRRVVLTASSGESLIWSNTVRFVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMRK 391
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
G + GK F LY+E+ + D++P E+ +NL + VL +K++ I L H DFM+
Sbjct: 392 QVLGSSSSGKLFCLYSEEFASKDMRPLKPAEMQHANLTSMVLFMKRVDIAGLGHCDFMNR 451
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPE+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I
Sbjct: 452 PAPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTI 511
Query: 522 SAMLSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ---NNEDP----S 573
+AM++ PNCF P A+ A F H +GDH TL+N+Y A++ N+
Sbjct: 512 AAMVTAPNCFSHLPSGAEAEALTCWKTFLHPEGDHFTLVNLYKAFQDVTLNSTSEHCVEK 571
Query: 574 WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVA 633
WC+D F+N AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A
Sbjct: 572 WCHDYFLNCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIA 631
Query: 634 H-LERTGQYLTVKDNQVVHLHPSNCLD---HKPEWVIYNEYVLTSRNFIRTVTDVRGEWL 689
++ +G YL + QV LHP +C PEWV+++++ ++ N+IR +++ E
Sbjct: 632 RDVDGSGNYLMLTHKQVAQLHPLSCYSVTKKMPEWVLFHKFSISENNYIRIASEISPELF 691
Query: 690 IDIAPHYYDLSNFPQCEA 707
+ + P YY SN P E+
Sbjct: 692 MQLVPQYY-FSNLPPSES 708
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 1253 (446.1 bits), Expect = 1.2e-127, P = 1.2e-127
Identities = 280/652 (42%), Positives = 403/652 (61%)
Query: 53 QRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPD 112
+R I E RK LPV Q K+E LQ +K NQV+I++GETGSGKTTQ+PQ+++E D T
Sbjct: 211 KRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVE--DGFTD- 267
Query: 113 RRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSA-RTVLKYLTDGM 171
+ K+ IA TQP +EM+V +G+EVGY IRFED ++ +TVLKY+TDGM
Sbjct: 268 -QGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGM 326
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLRE +TD L +Y I++DEAHERTLATD+L GLLK++L RP LKL++ SAT+ A+KF
Sbjct: 327 LLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKF 386
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDILVFLTGEE 290
+F P+ VPGR +PV+I YT +PE +Y+ AAI T+ QIH + GDILVFLTG+E
Sbjct: 387 SEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQE 446
Query: 291 EIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVV 350
EIE K+ + ++ +G + + + P+Y+ LP Q KIF+ RK+V+
Sbjct: 447 EIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENC-------RKVVL 499
Query: 351 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPG 410
+TNIAETSLTIDGI YVIDPGF K+ Y P + LL P S+AS QR+GRAGR PG
Sbjct: 500 ATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPG 559
Query: 411 KCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 470
KCFR++T+ S+ ++L+ PEI R+NL+NTVL L LG+ DL+ F MD P+ TL ++
Sbjct: 560 KCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKS 619
Query: 471 LEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN-CSN---EILSISAML- 525
LE L LGAL+ G +T +G+ M EFP +P+ +K+L + + C E L+I +ML
Sbjct: 620 LENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLH 679
Query: 526 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 585
P+ F+ QK D A + ++ DH+ L +++ ++ + SWC D+ + + +
Sbjct: 680 ETPSLFI----GQKR-DAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTM 734
Query: 586 KSADNVRQQLVRIMARFNLKLCSND-----FNSRDYYVNIR--KAMLAGYFMQVAHLERT 638
N+R QL R + L + ND + Y+N R + ++G+ M + L T
Sbjct: 735 LRVRNIRNQLFRCSEKVGL-VEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPT 793
Query: 639 GQYLTVKDNQV---VHLHPSNCL--DHK-----P-EWVIYNEYVLTSRNFIR 679
G Y T+ + V +HP++ L +HK P ++V+Y + +LTS+ FIR
Sbjct: 794 G-YQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIR 844
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 264/618 (42%), Positives = 391/618 (63%)
Query: 65 LPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQP 124
LP+ + K+ L +++ V I+VG+TGSGKTTQ+PQ+ L+ T + IA TQP
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQY-LDQAGWCTEGKA----IAVTQP 76
Query: 125 XXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLER 184
EEM +GE+VGYSIRFED +SA T +K+LTDGMLLREA+ DPLL R
Sbjct: 77 RRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLSR 136
Query: 185 YKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG-----AP 239
Y VI++DEAHER+L+TD+L G+LK++LK RP+L+++V SATL+AE F YF G P
Sbjct: 137 YSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQQGP 196
Query: 240 ----------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGE 289
++ + GR++PV+ + + +Y+E +++TV IH+ E GDIL+FLTG
Sbjct: 197 NGEVGGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFLTGR 256
Query: 290 EEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIV 349
EEIE A + I++ T + + + +PLY+ L Q +FE RK+V
Sbjct: 257 EEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENT-------RKVV 309
Query: 350 VSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQP 409
VSTNIAE S+TI+GIVYV+D GFAK + Y+P +E+L PISKA+A QR+GRAGRT+P
Sbjct: 310 VSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKP 369
Query: 410 GKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMR 469
GKCFRLYT+ ++ L T PEI RSNLA ++ LK LGID++V FDF+ P + ++R
Sbjct: 370 GKCFRLYTQHAYEQ-LPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIR 428
Query: 470 ALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVP 528
A E+L LGA+DD LT+ +G +M+E +DP M+K+L+ + + C +EIL+I+AM+S+
Sbjct: 429 AFELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQ 488
Query: 529 NC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY-KQNNEDPSWCYDNFVNHRALK 586
+V+ +K+++ ++ +F +GDHLT LNVY A+ + ++ WC DN +N+R+L
Sbjct: 489 GAVWVQHDGDKKSSESSRRKFAVEEGDHLTYLNVYQAFVTKGKKESKWCRDNLLNYRSLL 548
Query: 587 SADNVRQQLVRIMARFNLKLCS---NDFNSRDYYV---NIRKAMLAGYFMQVAHLERTGQ 640
A +VR QL R + RF +++ + +N D I++ + GYF A ++ G
Sbjct: 549 RAVSVRAQLKRYLERFGIQVDETFPSHYNKSDLSKPAEKIQRCLTTGYFAHAARMQPDGT 608
Query: 641 YLTVKDNQVVHLHPSNCL 658
+ TV +H HPS+ +
Sbjct: 609 FKTVSGGMTLHAHPSSLM 626
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 188/471 (39%), Positives = 298/471 (63%)
Query: 240 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKI 299
++ + GR++PV+ + + +Y+E +++TV IH+ E GDIL+FLTG EEIE A + I
Sbjct: 207 IISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFLTGREEIETAIQLI 266
Query: 300 TKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSL 359
++ T + + + +PLY+ L Q +FE RK+VVSTNIAE S+
Sbjct: 267 SERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENT-------RKVVVSTNIAEASV 319
Query: 360 TIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEK 419
TI+GIVYV+D GFAK + Y+P +E+L PISKA+A QR+GRAGRT+PGKCFRLYT+
Sbjct: 320 TINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCFRLYTQH 379
Query: 420 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 479
++ L T PEI RSNLA ++ LK LGID++V FDF+ P + ++RA E+L LGA
Sbjct: 380 AYEQ-LPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIRAFELLYSLGA 438
Query: 480 LDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPREA 537
+DD LT+ +G +M+E +DP M+K+L+ + + C +EIL+I+AM+S+ +V+
Sbjct: 439 IDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQGAVWVQHDGD 498
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAY-KQNNEDPSWCYDNFVNHRALKSADNVRQQLV 596
+K+++ ++ +F +GDHLT LNVY A+ + ++ WC DN +N+R+L A +VR QL
Sbjct: 499 KKSSESSRRKFAVEEGDHLTYLNVYQAFVTKGKKESKWCRDNLLNYRSLLRAVSVRAQLK 558
Query: 597 RIMARFNLKLCS---NDFNSRDYYV---NIRKAMLAGYFMQVAHLERTGQYLTVKDNQVV 650
R + RF +++ + +N D I++ + GYF A ++ G + TV +
Sbjct: 559 RYLERFGIQVDETFPSHYNKSDLSKPAEKIQRCLTTGYFAHAARMQPDGTFKTVSGGMTL 618
Query: 651 HLHPSNCL-DHKPEWVIYNEYVLTS-RNFIRTVTDVRGEWLIDIAPHYYDL 699
H HPS+ + + K +WVI++E + T + FIR +T + +L++ AP+YY++
Sbjct: 619 HAHPSSLMFNRKADWVIFHEIMQTGEKTFIRDITKIEKSYLLEYAPNYYNM 669
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 707 (253.9 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
Identities = 148/363 (40%), Positives = 231/363 (63%)
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RKI++STNI ETS+TID IVYVID G KQK+YNP +ESL+ P SKAS +QR+GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
R + GKCFRL+T+KSF DL + PEI R +++ +L LK LG+DD+++FDF+DPP+P
Sbjct: 863 RKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESP-KYNCSNEILSISAM 524
+++ LE+L LGAL+D+GNLT G KM+EFP D + SKM++ + KYNC +EIL++++M
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 525 LS-VPNCFVRPREAQKAADEAKARFGHIDG--DHLTLLNVYHAYKQNNEDPSWCYDNFVN 581
L+ N F + +K A+ K F I+G D L LN+Y ++NN S+CYD+F+
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMF-IIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQ 1040
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 641
+ L +V+ QL+ I + ++ + + + + NI+K++++ +F A +
Sbjct: 1041 YHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTEL 1100
Query: 642 LTVKDNQVVHLHPSNCL-------DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAP 694
+K NQVV ++P++ L +++ +I+ E + ++++IR V L IA
Sbjct: 1101 KIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIAD 1160
Query: 695 HYY 697
Y+
Sbjct: 1161 FYF 1163
Score = 560 (202.2 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
Identities = 113/284 (39%), Positives = 180/284 (63%)
Query: 49 KPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDI 108
K ++ +I+++RK LP++ + + L+ +K N+++ILVGETGSGK+TQ+ Q++ E
Sbjct: 422 KRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYEC--- 478
Query: 109 ETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLT 168
I CTQP EEM+V IG+EVGY IRF++ +S T + Y+T
Sbjct: 479 ---KYHMYGNIICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMT 535
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
DGM LR + +P LE V+++DEAHER L TDV+ ++K++ R ++++V+ SATL+A
Sbjct: 536 DGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDA 595
Query: 229 EKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTG 288
EK YF AP+ VPGR + V+I+YT E +Y+ A + T++QIH+ + GDILVFL G
Sbjct: 596 EKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPG 655
Query: 289 EEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFE 332
+ EIE +++ ++ + + + ++P+YS+LP Q +IFE
Sbjct: 656 QYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 707 (253.9 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
Identities = 148/363 (40%), Positives = 231/363 (63%)
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RKI++STNI ETS+TID IVYVID G KQK+YNP +ESL+ P SKAS +QR+GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
R + GKCFRL+T+KSF DL + PEI R +++ +L LK LG+DD+++FDF+DPP+P
Sbjct: 863 RKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESP-KYNCSNEILSISAM 524
+++ LE+L LGAL+D+GNLT G KM+EFP D + SKM++ + KYNC +EIL++++M
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 525 LS-VPNCFVRPREAQKAADEAKARFGHIDG--DHLTLLNVYHAYKQNNEDPSWCYDNFVN 581
L+ N F + +K A+ K F I+G D L LN+Y ++NN S+CYD+F+
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMF-IIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQ 1040
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 641
+ L +V+ QL+ I + ++ + + + + NI+K++++ +F A +
Sbjct: 1041 YHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTEL 1100
Query: 642 LTVKDNQVVHLHPSNCL-------DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAP 694
+K NQVV ++P++ L +++ +I+ E + ++++IR V L IA
Sbjct: 1101 KIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIAD 1160
Query: 695 HYY 697
Y+
Sbjct: 1161 FYF 1163
Score = 560 (202.2 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
Identities = 113/284 (39%), Positives = 180/284 (63%)
Query: 49 KPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDI 108
K ++ +I+++RK LP++ + + L+ +K N+++ILVGETGSGK+TQ+ Q++ E
Sbjct: 422 KRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYEC--- 478
Query: 109 ETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLT 168
I CTQP EEM+V IG+EVGY IRF++ +S T + Y+T
Sbjct: 479 ---KYHMYGNIICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMT 535
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
DGM LR + +P LE V+++DEAHER L TDV+ ++K++ R ++++V+ SATL+A
Sbjct: 536 DGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDA 595
Query: 229 EKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTG 288
EK YF AP+ VPGR + V+I+YT E +Y+ A + T++QIH+ + GDILVFL G
Sbjct: 596 EKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPG 655
Query: 289 EEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFE 332
+ EIE +++ ++ + + + ++P+YS+LP Q +IFE
Sbjct: 656 QYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
Identities = 265/625 (42%), Positives = 381/625 (60%)
Query: 86 LVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIG 145
L GETGSGKTTQ+PQ++ EG R+ +IA TQP +E +G
Sbjct: 4 LSGETGSGKTTQLPQYLYEG------GIGRQGVIAVTQPRRVAAISLATRVSDEKRTELG 57
Query: 146 EEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFG 205
+ VGY++RF+D SS T +K+LTDGMLLREA++D LL +Y I+LDEAHERT+ TDVLFG
Sbjct: 58 KLVGYTVRFDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFG 117
Query: 206 LLKEVLKNRPDL-----KLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPER 260
++K + R +L K++VMSAT++ + F YF GA ++ + GR HP+++FYT++P++
Sbjct: 118 VVKAAQRRRKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQ 177
Query: 261 DYLEAAIRTVVQIHMCEPSG-DILVFLTGEEEIEDACRKITKEIT-NMGDQVGPVKVVPL 318
DYL AA+ +V QIH PS DILVFLTG+EEIE A K ++I ++ D + V+PL
Sbjct: 178 DYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIE-AVSKTCRDIAKHLPDGCPSMLVLPL 236
Query: 319 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 378
Y++LP A Q ++F+ RK++++TNIAETS+TI GI YV+D G K K Y
Sbjct: 237 YASLPYAQQLRVFQGAPKGC-------RKVIIATNIAETSITITGIKYVVDTGMVKAKKY 289
Query: 379 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 438
NP +E L V +SK A QR+GRAGR G C+RLYTE F + T PEI R NL
Sbjct: 290 NPDSGLEVLAVQRVSKTQAWQRAGRAGREDSGICYRLYTENEFEK-FEKMTVPEIQRCNL 348
Query: 439 ANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN---LTEMGEKMSE 495
A+ +L L + + +++ FDFM P+P+ + A+ L+ LGAL+ N LT +G KM+
Sbjct: 349 ASVLLQLLAMKVPNVLTFDFMSKPSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRKMAA 408
Query: 496 FPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDH 555
FPL+P+ +K ++ SPK++C+ EIL+I ++LSV + P + + +F +GDH
Sbjct: 409 FPLEPKFAKTILLSPKFHCTEEILTIVSLLSVDSVLYNPPSRRDEVQAMRKKFLSSEGDH 468
Query: 556 LTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKL--CSNDFNS 613
+TLLN+Y +K D WC +NFVN R + A VR QL I + ++ + C D S
Sbjct: 469 ITLLNIYRTFKSLGGDKDWCRENFVNSRNMMLAAEVRAQLRDICLKMSMPMVSCRGDVES 528
Query: 614 RDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVL 672
IR+ + FM A L+ G Y T Q V +HPS+ L H +P V+Y E +
Sbjct: 529 ------IRRCLAHSLFMSAAELQPDGTYTTTDSRQPVAIHPSSALFHCRPACVVYTELLH 582
Query: 673 TSRNFIRTVTDVRGEWLIDIAPHYY 697
TS+ ++R + V EWL + AP Y+
Sbjct: 583 TSKCYMRDLCVVAAEWLYEAAPDYF 607
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 1196 (426.1 bits), Expect = 1.3e-121, P = 1.3e-121
Identities = 256/652 (39%), Positives = 398/652 (61%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
++E+R+ LP+ Q +++ L L+ +QV+ILVGETGSGK+TQ+PQ++ E K
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEW------GWHTKG 93
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
+I T+P +E +G+ VGY +RF + S+ T +K++T+G+LLRE +
Sbjct: 94 LIGITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVL 153
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY- 236
DPLL +Y VI++DEAHER + TD++ GLLK++L+ R LKL++ SAT++A F +F
Sbjct: 154 ADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSW 213
Query: 237 ---GAPLMK--VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
G +K + GR+HPV FY EP DY++ + TV ++H EP GDIL FLTG+EE
Sbjct: 214 PGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEE 273
Query: 292 IEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVS 351
+ +A + +E +Q +KV+P+Y ++ Q +F RK+V++
Sbjct: 274 VLEAL-DLLREYIASSEQEN-LKVLPMYGSMSSTDQLSVF-------FTPPKGTRKVVLA 324
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETS+TI GIVYVID G+ K K YNP+ +SL++ P+SKASA QR+GRAGR +PGK
Sbjct: 325 TNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGK 384
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
+RLYT+ + L P+ PE+ RS L+ +L LK LGI +++ FDF PP + L+ AL
Sbjct: 385 VYRLYTKSDYEA-LAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSAL 443
Query: 472 EVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC 530
E L L A+D+ GNLT+ +G ++E P +SKML S + CS EI++I A+L V +
Sbjct: 444 ESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSI 503
Query: 531 FVRPREA--QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSA 588
F RP A Q++ A +F +GD +T+LN Y + + +C F+ +R LK A
Sbjct: 504 FSRPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRA 563
Query: 589 DNVRQQLVRIMAR-FNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDN 647
++R+QL+ + + + + + F+ + + K + AG+F QVA+L +G Y +
Sbjct: 564 HSLREQLITVARKKYGIPI----FSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSG 619
Query: 648 QVVHLHPSNCLDHKPE--WVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
+ +HP++ L P+ +V+Y E + T++ F+ VT ++ EWL ++APHYY
Sbjct: 620 TELAIHPNSTLYTLPQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYY 671
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 760 (272.6 bits), Expect = 5.4e-120, Sum P(2) = 5.4e-120
Identities = 152/320 (47%), Positives = 219/320 (68%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
ILE+R+ LP++ ++E L +L+ N ++I+VGETGSGKTTQ+ Q++ E D T D
Sbjct: 531 ILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHE--DGYT-DYG--- 584
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQP EEM V +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++
Sbjct: 585 MIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESL 644
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKLVV SAT++A+KF +F
Sbjct: 645 READLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGN 704
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDILVF+ G+E+IE
Sbjct: 705 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSE 764
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+I + + + ++ + V+P+YS LP +Q KIF+ RK +V+TNIAET
Sbjct: 765 QIVEHLEEL-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 816
Query: 358 SLTIDGIVYVIDPGFAKQKV 377
SLT+DGI++VID G+ K KV
Sbjct: 817 SLTVDGIMFVIDSGYCKLKV 836
Score = 453 (164.5 bits), Expect = 5.4e-120, Sum P(2) = 5.4e-120
Identities = 95/254 (37%), Positives = 148/254 (58%)
Query: 453 LVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKY 512
L+ F + PA L AL +L + G G LT G +M EFPLDP +SKML+ S
Sbjct: 851 LIEF-YGSEPAFHWLQSAL-LLPFSGGFIPPGGLTSTGRQMVEFPLDPALSKMLIVSCDM 908
Query: 513 NCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP 572
CS+EIL I +MLSVP F RP+ ++ +D+ + +F + DHLT LNVY +K NN
Sbjct: 909 GCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNNYST 968
Query: 573 SWCYDNFVNHRALKSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFM 630
WC +F++ +A++ VR QL IM R +L C D++ +RK + A YF
Sbjct: 969 LWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDV------VRKCICAAYFH 1022
Query: 631 QVAHLERTGQYLTVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGE 687
Q A L+ G+Y+ ++ HLHP++ L + P++++Y+E V+T++ +++ VT V GE
Sbjct: 1023 QAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGE 1082
Query: 688 WLIDIAPHYYDLSN 701
WL ++ P +Y + +
Sbjct: 1083 WLAELGPMFYSIKH 1096
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
Identities = 244/568 (42%), Positives = 364/568 (64%)
Query: 59 LEKRKSL-PVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
L K SL P+ + K+ L V+++N V ++VG+TGSGKTTQIPQF LE + +
Sbjct: 14 LHKPSSLLPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQF-LEKAGWCSDGK---- 68
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
+I TQP EE +G+EVGYSIRFED +S T +K+LTDG+L+REA+
Sbjct: 69 LIGVTQPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREAL 128
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
DPLL RY ++++DEAHER+++TD+L GLLK++ K RP+L++++ SATL+AE+F +F
Sbjct: 129 VDPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSS 188
Query: 238 A----------P------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGD 281
P ++ + GR +P++I Y + P DYL+ A+ TV+ +H EP GD
Sbjct: 189 TLGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLDVHENEPDGD 248
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
ILVFLTG +EIE A +++ ++ Q + +PL+S L Q IFE
Sbjct: 249 ILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANT--- 305
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK++ STNIAE S+TI GIVYV+D GF K + YNP+ +E+L PISKA+A QR+
Sbjct: 306 ----RKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRA 361
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTE+S+ + L PE+ RSNLA +L LK LGID+++HFDF+ P
Sbjct: 362 GRAGRTKPGKCFRLYTEESYTS-LSDTNIPEVQRSNLAPFILQLKALGIDNVLHFDFLTP 420
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILS 520
P E + +ALE+L LGALDD LT+ +G +M+E +DP M+K L+ + + C +E+L+
Sbjct: 421 PPAELMTKALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEMLT 480
Query: 521 ISAMLSVP-NCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY-KQNNEDPSWCYDN 578
I+AM S + +++ +K + + +F +GDHLT LNVY A+ + ++ +C++N
Sbjct: 481 IAAMTSAGGDVWIQHEGERKQFESRRRKFAAGEGDHLTFLNVYQAFVTKGRKESGFCHEN 540
Query: 579 FVNHRALKSADNVRQQLVRIMARFNLKL 606
+N++ + A ++R QL R + RF +++
Sbjct: 541 LLNYKTMSRAVSIRAQLKRYLERFGIRV 568
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 248/646 (38%), Positives = 407/646 (63%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+LP+ Q +E+ ++ ++ N V++++GETGSGK+TQ+ Q + + +IA TQ
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQI------LHRHGYTKSGVIAITQ 56
Query: 124 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
P +E+DV +GE+VGY+IRFED ++++T +KYLTDG+LLRE++++P+L+
Sbjct: 57 PRRVAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLD 116
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRP-DLKLVVMSATLEAEKFQGYFYGAPLMK 242
Y VI+LDEAHER+L TD+L GL+K +++ R + K+++ SATL+ EK +F G P++
Sbjct: 117 DYSVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLN 176
Query: 243 VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKE 302
VPG+L+PVEI Y++E Y+E++++ + IH+ EP GDIL+F+TG+++IE ++ ++
Sbjct: 177 VPGKLYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEK 236
Query: 303 ITNMGD-QVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTI 361
+ ++ + + PL+ +LPP MQ ++F R+ +VSTNIAETSLT+
Sbjct: 237 VRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNC-------RRFIVSTNIAETSLTV 289
Query: 362 DGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSF 421
DG+VYVID G+ KQ+ YNP + SL V ISK A+QR+GRAGRT+PGKC+RLY +
Sbjct: 290 DGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVY 349
Query: 422 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDL--VHFDFMDPPAPETLMRALEVLNYLGA 479
+D T PEI R++LA +VL LK L + D+ + FDF+D P+ E+L AL+ L ++ A
Sbjct: 350 RDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDA 409
Query: 480 LDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFV----RPR 535
+D++G +T +G MS+ PL+P +S+ L+E+ + C ++ L++ AMLS + +P
Sbjct: 410 IDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPS 469
Query: 536 EAQKAADE-AKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQ 594
E ++ DE + G GDH+ LL ++ ++ + N DP WC +N + R + +VR+Q
Sbjct: 470 EKKRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQ 529
Query: 595 LVRIMARFN---LKLCSND--FNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVK-DN 647
L +IM + + L++ ++ +SRD Y +RKA+ G Q+A + R Y T+ +
Sbjct: 530 LCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQS 589
Query: 648 QVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIA 693
Q+V +HPS+ L + ++ N YV+ T +R +D+A
Sbjct: 590 QLVQVHPSSVLSADNDGMMPN-YVVYHELISTTRPFMRNVCAVDMA 634
Score = 211 (79.3 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 56/173 (32%), Positives = 96/173 (55%)
Query: 533 RPREAQKAADE-AKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNV 591
+P E ++ DE + G GDH+ LL ++ ++ + N DP WC +N + R + +V
Sbjct: 467 KPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDV 526
Query: 592 RQQLVRIMARFN---LKLCSND--FNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVK 645
R+QL +IM + + L++ ++ +SRD Y +RKA+ G Q+A + R Y T+
Sbjct: 527 RRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLS 586
Query: 646 -DNQVVHLHPSNCL--DHK---PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
+Q+V +HPS+ L D+ P +V+Y+E + T+R F+R V V W+ I
Sbjct: 587 FQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWVAPI 639
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 760 (272.6 bits), Expect = 8.2e-118, Sum P(2) = 8.2e-118
Identities = 152/320 (47%), Positives = 219/320 (68%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
ILE+R+ LP++ ++E L +L+ N ++I+VGETGSGKTTQ+ Q++ E D T D
Sbjct: 528 ILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHE--DGYT-DYG--- 581
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQP EEM V +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++
Sbjct: 582 MIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESL 641
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKLVV SAT++A+KF +F
Sbjct: 642 READLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGN 701
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDILVF+ G+E+IE
Sbjct: 702 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSE 761
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+I + + + ++ + V+P+YS LP +Q KIF+ RK +V+TNIAET
Sbjct: 762 QIVEHLEEL-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 813
Query: 358 SLTIDGIVYVIDPGFAKQKV 377
SLT+DGI++VID G+ K KV
Sbjct: 814 SLTVDGIMFVIDSGYCKLKV 833
Score = 432 (157.1 bits), Expect = 8.2e-118, Sum P(2) = 8.2e-118
Identities = 85/221 (38%), Positives = 134/221 (60%)
Query: 486 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAK 545
LT G +M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+ ++ +D+ +
Sbjct: 876 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVR 935
Query: 546 ARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMA--RFN 603
+F + DHLT LNVY +K NN WC +F++ +A++ VR QL IM R +
Sbjct: 936 EKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMS 995
Query: 604 LKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL---DH 660
L C D++ +RK + A YF Q A L+ G+Y+ ++ HLHP++ L +
Sbjct: 996 LASCGTDWDV------VRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGY 1049
Query: 661 KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
P++++Y+E V+T++ +++ VT V GEWL ++ P +Y + +
Sbjct: 1050 TPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKH 1090
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 1154 (411.3 bits), Expect = 3.8e-117, P = 3.8e-117
Identities = 263/670 (39%), Positives = 401/670 (59%)
Query: 63 KSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACT 122
K LP++Q K++ +Q ++ N +I+ GETGSGKTTQ+PQ++ + R I T
Sbjct: 16 KKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKA------GLSRNGRIGVT 69
Query: 123 QPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLL 182
QP EM V +GEEVGY +RF+DCS+ T++KY+TDG LLRE + DP L
Sbjct: 70 QPRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSL 129
Query: 183 ERYKVIVLDEAHERTLATDVLFGLLKE-VLK----NRPDLKLVVMSATLEAEKFQGYFYG 237
+Y +++LDEAHER+L TDVL GLLK+ +LK N+ LK+VVMSATLE EK ++
Sbjct: 130 TQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFYGN 189
Query: 238 APLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
P+ +PGR +PV E F +D Y++ ++ + +H E +GDILVFLTG+ E
Sbjct: 190 CPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDVHTNEAAGDILVFLTGQSE 249
Query: 292 IEDACRKITK--EITN----MGDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXX 344
IE AC + + EI + + D+ V + ++ LY ++P Q++IF+
Sbjct: 250 IEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQRQIFQPAPKGV------ 303
Query: 345 XRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRA 404
RK VV+TNIA TSLTIDGI Y++D GF KQ +N RV ++ L V PISK+ A QR+GRA
Sbjct: 304 -RKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISKSEAQQRAGRA 362
Query: 405 GRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 463
GRT GKCFR+Y+ K F + P+ T PEI R++L + +LTLK LG+ D++ F ++D P
Sbjct: 363 GRTAAGKCFRIYS-KDFWDTCMPEYTIPEIQRTSLTSVILTLKCLGVHDVIRFPYLDCPE 421
Query: 464 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 523
++ AL+ L A+D G +T++G M EFPL P +++ L+++ C + +L ++A
Sbjct: 422 ERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLPPNLTRALLKAAALGCEDIMLPVAA 481
Query: 524 MLSVPNCFVRPREAQKAADEAKARFGHI------DGDHLTLLNVYHAYKQNNEDPSWCYD 577
MLSV N F+RP + +K EA+ R I D L LL V+ + + +WC +
Sbjct: 482 MLSVENIFIRPGKPEKQK-EAEVRHKEIAACSGGSNDFLMLLCVFEKCRASENPSAWCKE 540
Query: 578 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVN----IRKAMLAGYFMQVA 633
N+++ RA+KSA +V QL I+ R LK DF + + +R+ + GYF VA
Sbjct: 541 NWIHWRAVKSAFSVETQLREILLR--LKQ-QKDFPHERFEGSRSELLRQCLCLGYFTNVA 597
Query: 634 HLERTGQYLTVKDN-QVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWL 689
+ T+ + V +HPS+CL + + +W+I+++ ++TSR ++RTV +R +W+
Sbjct: 598 RRSIGKSFCTMDGHGSSVLIHPSSCLFGQELQLDWIIFHDVLVTSRVYVRTVCPIRYDWV 657
Query: 690 IDIAPHYYDL 699
D+ P +++
Sbjct: 658 KDLLPKLHEI 667
>TAIR|locus:2147785 [details] [associations]
symbol:AT5G14900 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0004386
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
KO:K12820 EMBL:AL391146 OMA:IRTVTHI IPI:IPI00537280 PIR:T51435
RefSeq:NP_196994.1 UniGene:At.65514 ProteinModelPortal:Q9LFR5
SMR:Q9LFR5 EnsemblPlants:AT5G14900.1 GeneID:831342
KEGG:ath:AT5G14900 TAIR:At5g14900 InParanoid:Q9LFR5
PhylomeDB:Q9LFR5 ProtClustDB:CLSN2916823 Genevestigator:Q9LFR5
Uniprot:Q9LFR5
Length = 301
Score = 1136 (405.0 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 210/275 (76%), Positives = 242/275 (88%)
Query: 436 SNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSE 495
+NLANTVLTLK L + +LV FD +D PAP+TL RAL+ L +LGALDDD NLT+ GE MSE
Sbjct: 2 TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSE 61
Query: 496 FPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPR-EAQKAADEAKARFGHIDGD 554
FPLDPQM+KML+ SP++NCSNEILSISAMLSVPNCF+RPR EAQKAADEAK+ F HIDGD
Sbjct: 62 FPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGD 121
Query: 555 HLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSR 614
HLTLLN++HA+ QNN+DP+WC F+N+RA+KSA +VR+QLVRIM RF +KLCS DFNSR
Sbjct: 122 HLTLLNLFHAFLQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCSPDFNSR 181
Query: 615 DYYVNIRKAMLAGYFMQVAHLERTGQYLTV--KDNQVVHLHPSNCLDHKPEWVIYNEYVL 672
DYYVNIRKA+LAGYFMQVAHLERTG YLT KD+QVVHLHPSNCLDHKPEWV+YNEYV
Sbjct: 182 DYYVNIRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCLDHKPEWVVYNEYVF 241
Query: 673 TSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEA 707
TSRNFIRTVT +RGEWL+D+APHYY L+NFP EA
Sbjct: 242 TSRNFIRTVTHIRGEWLVDVAPHYYKLANFPSSEA 276
Score = 38 (18.4 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 352 TNIAETSLTIDGI 364
TN+A T LT+ G+
Sbjct: 2 TNLANTVLTLKGL 14
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 1150 (409.9 bits), Expect = 1.0e-116, P = 1.0e-116
Identities = 240/566 (42%), Positives = 352/566 (62%)
Query: 143 TIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDV 202
T VGY++RF+D +S T +K+LTDGMLLREA++D LL +Y ++LDEAHERT+ TDV
Sbjct: 56 TRSSSVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDV 115
Query: 203 LFGLLKEVLKNRPDL-----KLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
LFG++K K R +L K++VMSAT++ + F YF GAP++ + GR HP+++FYT++
Sbjct: 116 LFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQ 175
Query: 258 PERDYLEAAIRTVVQIHMCEPSG-DILVFLTGEEEIEDACRKITKEIT-NMGDQVGPVKV 315
P+ DYL AA+ +V QIH PS DILVFLTG+EEIE A K ++I ++ D + V
Sbjct: 176 PQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIE-AMSKTCRDIAKHLPDGCPAMLV 234
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
+PLY++LP A Q ++F+ RK+++STNIAETS+TI GI YV+D G K
Sbjct: 235 LPLYASLPYAQQLRVFQGAPKGY-------RKVIISTNIAETSITITGIKYVVDTGMVKA 287
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
K YNP +E L V +SK A QR+GRAGR G C+RLYTE F T PEI R
Sbjct: 288 KKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK-FDKMTVPEIQR 346
Query: 436 SNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEK 492
NLA+ +L L + + +++ FDFM P+P+ + A+ L+ LGAL DD LT MG K
Sbjct: 347 CNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRK 406
Query: 493 MSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHID 552
M+ FPL+P+ +K ++ SPK++C+ EIL+I ++LSV + P ++ + +F +
Sbjct: 407 MAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSE 466
Query: 553 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFN 612
GDH+TLLN+Y +K + WC +NFVN + + VR QL I + ++ + S
Sbjct: 467 GDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIAS---- 522
Query: 613 SRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYV 671
SR ++R+ + FM A L+ G Y T +Q V +HPS+ L H KP V+Y E +
Sbjct: 523 SRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELL 582
Query: 672 LTSRNFIRTVTDVRGEWLIDIAPHYY 697
T++ ++R + + +WL + AP Y+
Sbjct: 583 YTNKCYMRDLCVIDAQWLYEAAPEYF 608
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
Identities = 258/649 (39%), Positives = 388/649 (59%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I +++KSLPV+ + L+ L+AN ++++ ETGSGKTTQIPQF+L +
Sbjct: 61 IEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLL------LAGYAKNG 114
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI TQP +E++ TIG+ VGY++RFED +S T +++LTDG+LLRE++
Sbjct: 115 MIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESI 174
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNR-----PDLKLVVMSATLEAEKFQ 232
D LL +Y VI+LDEAHERT+ D+LFG++K+ K R +LK+VV SAT++ + F
Sbjct: 175 KDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFG 234
Query: 233 GYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSG-DILVFLTGEEE 291
YF M + GR +PV + +T+E DY+ + T+ IH P D+L+FLTG+EE
Sbjct: 235 NYF-NCKGMYLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEE 293
Query: 292 IEDACRKITKEITNMGDQVGP--VKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIV 349
IE ++I +++ + D G ++V LY+ L Q + F RK++
Sbjct: 294 IESLAQQI-RQLAKI-DTTGTTDLRVFTLYAQLSQGKQLECF-------VPTPANVRKVI 344
Query: 350 VSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQP 409
++TNIAETS+TI GI VID GF K+K +N ++ L ISKA A QR+GRAGR
Sbjct: 345 LATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDAD 404
Query: 410 GKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMR 469
G C+R YT+ ++ T PEILR+N + VL L L ID +FDF+DPP + L
Sbjct: 405 GTCYRAYTKAEMDS-FADATQPEILRTNPTSMVLQLLALDID-CNNFDFLDPPLEDGLRS 462
Query: 470 ALEVLNYLGALD--DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV 527
A + L+ LGA+ DD +T +G +M ++PLDP+ SK+L+ + + C EILS+ ++LS
Sbjct: 463 AYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSS 522
Query: 528 PNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKS 587
+ FV E + A A A+F GDHLTLLNV++ + ++ + WC+DN++N R+L
Sbjct: 523 DHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTY 582
Query: 588 ADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDN 647
A NVR+QL I +L L NS D ++K +L G+F +A L+R G Y+T N
Sbjct: 583 ARNVRRQLREISEHLHLAL-----NSSDDIEMLKKCILNGFFENIAVLQRDGFYITASGN 637
Query: 648 QVVHLHPSNCLD--HKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAP 694
+HPS+ L +KP ++++ E V T + F+R VT++ EW+ ++ P
Sbjct: 638 IRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
Identities = 253/673 (37%), Positives = 398/673 (59%)
Query: 65 LPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQP 124
LP+ + + ++ + +I+ GETGSGK+TQ+P+++ E + I TQP
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEA------GLAQHGAIGVTQP 54
Query: 125 XXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLER 184
EEM +G VGY +RF+DCSS T +KY+TDG LLR + DPLL +
Sbjct: 55 RRVATISVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSK 114
Query: 185 YKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-----DLKLVVMSATLEAEKFQGYFYGA 238
Y +I+LDEAHER+L+TD+LFGLLK++ L+N+P ++K+VVMSATLE +K +F
Sbjct: 115 YSIIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHC 174
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
++ +PGR +PV EIF RD Y+ A++ + IH+ EP GDILVFLTG+ EI
Sbjct: 175 SVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILVFLTGQIEI 234
Query: 293 EDACRKITKEITNMG------DQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
E AC + K+ ++ D+ + + ++PLY ++ Q++IF
Sbjct: 235 EKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTDQQKRIF-------LPAPKGI 287
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK VVSTNIA TSLTI+G+ YV+D GF KQ +NPRV ++ L V PISK+ A QR+GRAG
Sbjct: 288 RKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPISKSEAMQRAGRAG 347
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GK +RLY+ + + + T PEI R++L + +LTLK L + D++ F ++D P
Sbjct: 348 RTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKCLSVHDVIRFPYLDRPEER 407
Query: 466 TLMRALEVLNYLGALDDD--GNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 523
++ AL+ L A+D G++T +GE + +FPL P +S ++++ +C + +L I+A
Sbjct: 408 HILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLSCAVIKAASLDCEDMLLPIAA 467
Query: 524 MLSVPNCFVRPREAQKAAD------EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYD 577
MLSV N F+RP + QK + E ++ G + D TLLN++ K + +WC+
Sbjct: 468 MLSVENVFIRPGDPQKQKEAELQHQELSSQVGGCN-DFATLLNIFEQCKASKSPSAWCHK 526
Query: 578 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVN----IRKAMLAGYFMQVA 633
+++ RA+KSA +V +QL I ++ LK DF + + +R+ + AGYF+ VA
Sbjct: 527 YWIHWRAVKSALSVEKQLREITSK--LKQLP-DFPKETFEGSRTELLRRCLCAGYFINVA 583
Query: 634 HLERTGQYLTVKDN-QVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWL 689
+ T+ + +V++HPS+ L + + EW+I+++ +TS+ ++RTV VR EW+
Sbjct: 584 RRSAARTFCTMDGHGSIVYIHPSSTLYNQETRLEWIIFHDVTVTSKIYVRTVCPVRYEWV 643
Query: 690 IDIAPHYYDLSNF 702
D+ P + + +
Sbjct: 644 KDLLPRLHQIDAY 656
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
Identities = 256/668 (38%), Positives = 391/668 (58%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
P EEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLN 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
E +C ++ + + ++ D + + ++P Y ++ Q++IF
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIF-------LPPPPGI 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++ + +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SV N F+RP E QK A+ E A+ G + D TL ++ K + SWC ++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQKHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 577
Query: 580 VNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
++ R L SA V QL ++ + + F + V +R+ + AGYF VA
Sbjct: 578 IHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEV-LRRCLCAGYFKNVAR-RS 635
Query: 638 TGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
G+ D + VH+HPS+ L + K EW+I++E ++T++ + R V +R EW+ D+
Sbjct: 636 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 695
Query: 693 APHYYDLS 700
P ++L+
Sbjct: 696 LPKLHELN 703
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 255/668 (38%), Positives = 391/668 (58%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
P EEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLT 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
E +C ++ + + ++ D + + ++P Y ++ Q++IF
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIF-------LPPPPGI 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++++ +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SV N F+RP E QK A+ E A+ G + D TL ++ K + SWC ++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 577
Query: 580 VNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
++ R L SA V QL ++ + + F + V +R+ + AGYF VA
Sbjct: 578 IHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEV-LRRCLCAGYFKNVAR-RS 635
Query: 638 TGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
G+ D + VH+HPS+ L + K EW+I++E ++T++ + R V +R EW+ D+
Sbjct: 636 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 695
Query: 693 APHYYDLS 700
P ++ +
Sbjct: 696 LPKLHEFN 703
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
Identities = 255/668 (38%), Positives = 391/668 (58%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
P EEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLT 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
E +C ++ + + ++ D + + ++P Y ++ Q++IF
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIF-------LPPPPGI 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++++ +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SV N F+RP E QK A+ E A+ G + D TL ++ K + SWC ++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 577
Query: 580 VNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
++ R L SA V QL ++ + + F + V +R+ + AGYF VA
Sbjct: 578 IHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEV-LRRCLCAGYFKNVAR-RS 635
Query: 638 TGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
G+ D + VH+HPS+ L + K EW+I++E ++T++ + R V +R EW+ D+
Sbjct: 636 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 695
Query: 693 APHYYDLS 700
P ++ +
Sbjct: 696 LPKLHEFN 703
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
Identities = 255/668 (38%), Positives = 391/668 (58%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
P EEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLT 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
E +C ++ + + ++ D + + ++P Y ++ Q++IF
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIF-------LPPPPGI 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++++ +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SV N F+RP E QK A+ E A+ G + D TL ++ K + SWC ++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 577
Query: 580 VNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
++ R L SA V QL ++ + + F + V +R+ + AGYF VA
Sbjct: 578 IHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEV-LRRCLCAGYFKNVAR-RS 635
Query: 638 TGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
G+ D + VH+HPS+ L + K EW+I++E ++T++ + R V +R EW+ D+
Sbjct: 636 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 695
Query: 693 APHYYDLS 700
P ++ +
Sbjct: 696 LPKLHEFN 703
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
Identities = 255/668 (38%), Positives = 392/668 (58%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
P EEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLS 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
E +C ++ + + ++ D + + ++P Y ++ Q++IF
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIF-------LPPPPGI 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y+++ ++ + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++ + +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SV N F+RP E QK A+ E A+ G + D TL ++ K + SWC ++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 577
Query: 580 VNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
++ R L SA V QL ++ + + F + V +R+ + AGYF VA
Sbjct: 578 IHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEV-LRRCLCAGYFKNVAR-RS 635
Query: 638 TGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
G+ D + VH+HPS+ L + K EW+I++E ++T++ + R V +R EW+ D+
Sbjct: 636 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 695
Query: 693 APHYYDLS 700
P ++L+
Sbjct: 696 LPKLHELN 703
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
Identities = 248/635 (39%), Positives = 378/635 (59%)
Query: 61 KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIA 120
++K LP+ + + + L ++ NQ+ I++G TG GKTTQIPQF+ E + +I
Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWAS-----QNGIIG 75
Query: 121 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDP 180
CTQP E++ G GYSI+F+ S +T +KY+TDG+LL E DP
Sbjct: 76 CTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDP 135
Query: 181 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPL 240
LLERY +++LDE HERTL+TD+L G+LK +L+ R D +LV+ SA+++A K +F +
Sbjct: 136 LLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKV 195
Query: 241 --MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRK 298
M + G+L PVE + Q+P +Y+++AI TV+ I+ P GDILVFL+G +EIE +K
Sbjct: 196 CTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKK 255
Query: 299 ITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETS 358
I + + + + +PL++ L Q ++F RK++ STNIAETS
Sbjct: 256 IEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDF-------RKVIFSTNIAETS 308
Query: 359 LTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTE 418
+TIDGIVYV+D GF KQ++YNP R L+ PISK+SA QRSGRAGRT GK FRLYTE
Sbjct: 309 ITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTE 368
Query: 419 KSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLG 478
K+++ ++ + +IL +++ VL LK LG+ +++ F F P LM ALE L LG
Sbjct: 369 KAYSL-MKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLG 427
Query: 479 ALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
LD+ GNLT+ +G ++S LD +SK L+ S ++ C++EILSI+++L+ F P +
Sbjct: 428 VLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSS 487
Query: 538 QKA-ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLV 596
K A A + F +GD +T LNV+ ++ N +D WC N++N++ L+ A ++R LV
Sbjct: 488 SKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLV 547
Query: 597 RIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSN 656
R + +F++ S D I K +L G+ VAHL+ G Y T+ QV L S+
Sbjct: 548 RFLNKFSIPTAQR-LPSSDCS-KILKCLLDGFVRNVAHLQNDGSYKTIGGKQV-WLDSSS 604
Query: 657 CL-DHKPEWVIYNEYVLTSRN-FIRTVTDVRGEWL 689
L + K W++Y+ V + F++ ++ + WL
Sbjct: 605 VLHEKKTPWIMYSSAVESETQIFVKNISKIESFWL 639
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 1118 (398.6 bits), Expect = 2.5e-113, P = 2.5e-113
Identities = 254/668 (38%), Positives = 390/668 (58%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 130 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 183
Query: 124 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
P EEM +G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 184 PRKVAAISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLT 243
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F
Sbjct: 244 KFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNC 303
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 304 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 363
Query: 293 EDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
E +C ++ + + ++ D + + ++P Y ++ Q++IF
Sbjct: 364 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIF-------LPPPPGI 416
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 417 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 476
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 477 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 536
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++++ +C + +L I+AML
Sbjct: 537 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 596
Query: 526 SVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SV N F+RP E QK A+ E A+ G + D TL ++ K + SWC ++
Sbjct: 597 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 655
Query: 580 VNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
++ R L SA V QL ++ + + F + V +R+ + AGYF VA
Sbjct: 656 IHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEV-LRRCLCAGYFKNVAR-RS 713
Query: 638 TGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
G+ D + VH+HPS+ L + K EW+I++E ++T++ + R V +R EW+ D+
Sbjct: 714 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 773
Query: 693 APHYYDLS 700
P ++ +
Sbjct: 774 LPKLHEFN 781
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
Identities = 257/687 (37%), Positives = 391/687 (56%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
NN+ N + ++L+ R+ LP++ K++ ++ + NQV I++GETGSGK+TQI
Sbjct: 156 NNTFNFSQNSFQLAATAQQLLQIREKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQI 215
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
PQF++ E P MI TQP EE +G++VGY +RF + +
Sbjct: 216 PQFLMP----ENPK-----MIGVTQPRRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMT 266
Query: 159 SARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN--RPD 216
+ +T LKYLTDGMLLRE M D L +Y I+LDEAHERT+ TD++ G LK+++ + R D
Sbjct: 267 NRQTKLKYLTDGMLLREIMLDSNLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKD 326
Query: 217 LKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 276
LK+VVMSATL AE F +F AP++ + G+++PV FY D ++ IR+++QI++
Sbjct: 327 LKIVVMSATLNAELFSNFFGNAPILYIEGKMYPVSQFYLDAESEDIVDTMIRSIIQINLN 386
Query: 277 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV-VPLYSTLPPAMQQKIFEXXX 335
EP GD+L FL G+EEI D C K +++ + P+ V +PLY+ L P Q KIFE
Sbjct: 387 EPEGDVLCFLPGQEEI-DNCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLP 445
Query: 336 XXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKA 395
RK++++TNIAETS+T+ G+ YVID G K KV+ + + +LL +PIS+A
Sbjct: 446 KGR-------RKVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQA 498
Query: 396 SAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH 455
SA QR+GRAGR GK FRLY E ++ L Q EI R+++ VLTLKKLG+DDL++
Sbjct: 499 SARQRAGRAGRESEGKVFRLYPESTYMA-LPKQQESEIKRNDIILPVLTLKKLGVDDLLN 557
Query: 456 FDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCS 515
+ +++ P + ++ AL L LGAL+D G +T +G KMS PL PQ+S +L+ + ++
Sbjct: 558 WSWLEYPGQDAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQLSVVLITAAEFGVL 617
Query: 516 NEILSISAMLSVPNCFVRPREAQKAADEA--KAR----FGHIDGDHLTLLNVYHAYKQNN 569
+ ++ I++ LSV N +A DE K R G+I GD + L + AY+
Sbjct: 618 SPVIDIASCLSVDNLITNV--TGEARDEINFKRRQHCPLGNIHGDLIALYEYFQAYQAQG 675
Query: 570 EDPSWCYDNFVNHRALKSADNVRQQLVRIM------------ARFNLKLCS------NDF 611
++ WC + + + K+ + ++ QL M A N +L N+
Sbjct: 676 KE--WCKELAFSFKGFKNVEKIKYQLQEYMMTTIKQDDSLTNAEKNKQLAKLRAQLDNEE 733
Query: 612 NSRDYYV-NIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHKPEW--VIYN 668
+ V +I K+ L GY A + T Q++ +HPS+ L KP ++Y
Sbjct: 734 TDKQLDVPSILKSFLKGYITNTAVGMPDRSFRTFNTGQLISVHPSSTLFGKPNMDAIMYI 793
Query: 669 EYVLTSRNFIRTVTDVRGEWLIDIAPH 695
EYV T++ + R V+ + WL +IAPH
Sbjct: 794 EYVFTTKGYARNVSAIELSWLQEIAPH 820
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
Identities = 266/721 (36%), Positives = 406/721 (56%)
Query: 3 TERKRKV--SLFDVVDETSV--SAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQ---RY 55
T +K+KV ++ + T + ++K+VK N G G +++ S N+ N Y R
Sbjct: 14 TSKKQKVRRNIHPFTNNTRIKRASKIVKFNDSGEGDHVSDQRS--NKENVLTYKSLKSRA 71
Query: 56 YEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRR 115
++L+ R++LPV+Q K E + +++N V +L+GETGSGK+TQIPQFVLE + D ++
Sbjct: 72 SDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLE----KLYDTKK 127
Query: 116 KMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLRE 175
IA TQP +E +GE+VGYS+RF++ ++ RT LKYLTDGMLLRE
Sbjct: 128 HGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRE 187
Query: 176 AMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN-RPDLKLVVMSATLEAEKFQGY 234
M + L Y VIV+DEAHERT+ TD++ G LK +++ RPDL+++VMSATL+AEKF +
Sbjct: 188 LMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEF 247
Query: 235 FYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIED 294
F AP++ V GR V+ +Y + P D ++A IR +QI+ E GDIL FL G+EEI+
Sbjct: 248 FNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDK 307
Query: 295 ACRKITKEITNMGDQVGPVKVV---PLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVS 351
A + K + D+ PV ++ PLY+ LP Q +F RK+V S
Sbjct: 308 AVTIMEKIAKYVSDEA-PVPLIVPYPLYAALPAVQQSLVF-------APIKGFKRKVVFS 359
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETS+TI G+ +V+D G K KV+ ++ + +LL PIS+ASA QRSGRAGR GK
Sbjct: 360 TNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGK 419
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
FRLY E + L Q+ PEI RS++ + VL LK+ G+DDL+++ + + P E ++ L
Sbjct: 420 SFRLYCESDYVK-LPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGL 478
Query: 472 EVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCF 531
+ L LGALD G +T+ G++M+ PL P +S +L+++ + C ++++ I + LSV N
Sbjct: 479 QELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLL 538
Query: 532 VRPR-EAQKAADEAKARF---GHIDGDHLTLLNVYHAYKQN---NEDPS-----WCYDNF 579
+ P E + +E + G GD + L ++ Y ++D S WC
Sbjct: 539 LNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLC 598
Query: 580 VNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSR------DYYVNIRKAMLAGYFMQVA 633
++ R K+ VR QL R + D S+ + I K L G+ A
Sbjct: 599 ISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISKILKCFLTGFIKNTA 658
Query: 634 HLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLID 691
Y TV + + +HPS+ L + ++Y EYV T++ + R V+ + WL +
Sbjct: 659 IGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEYVFTTKGYARNVSRIELSWLQE 718
Query: 692 I 692
+
Sbjct: 719 V 719
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 254/669 (37%), Positives = 388/669 (57%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
P EEM +G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLT 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACR---KITKEIT---NMGDQ-VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXX 345
E +C ++ + + ++ D + + ++P Y ++ Q++IF
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIF-------LPPPPGI 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++++ +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SV N F+RP E QK A+ E A+ G + D TL ++ K + SWC ++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 577
Query: 580 VNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
++ R L SA V QL ++ + + F + V +R+ + AGYF VA
Sbjct: 578 IHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEV-LRRCLCAGYFKNVAR-RS 635
Query: 638 TGQYLTVKDNQ--VVHLHPSNCLDH----KPEWVIYNEYVLTSRNFIRTVTDVRGEWLID 691
G+ D + VH+H NC H K EW+I++E ++T++ + R V +R EW+ D
Sbjct: 636 VGRTFCTMDGRGSPVHIH-QNCKLHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRD 694
Query: 692 IAPHYYDLS 700
+ P ++ +
Sbjct: 695 LLPKLHEFN 703
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 249/704 (35%), Positives = 400/704 (56%)
Query: 18 TSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQV 77
TS +L + G PG + +N ++G P+S RYYE+L++R++LP+W + FL+
Sbjct: 2 TSQPLRLAEEYGPSPG----ESELAVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQ 57
Query: 78 LKANQ--VIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXX 135
L++N V+++ GE GSGK+TQIPQ+ E +K + TQP
Sbjct: 58 LESNPTGVVLVSGEPGSGKSTQIPQWCAE---FALARGFQKGQVTVTQPYPLAARSLALR 114
Query: 136 XXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHE 195
+EMD+T+G EVGYSI EDC+ T+L++ D +LL+E + + V+VLDEA E
Sbjct: 115 VADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQE 174
Query: 196 RTLATDVLFGLLKEV-LKNRP-DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRL--HPVE 251
R++A+D L GLL++ L+ P DL++VV++ K + ++ P++ +P P
Sbjct: 175 RSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIVHIPREPGERPSP 234
Query: 252 IFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVG 311
I++ P D +EAA + V+++ E GD+LVFL EEEI C +++E+ ++ Q
Sbjct: 235 IYWDTIPP-DRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGL 293
Query: 312 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 371
P +V+PL+ A+Q ++E RK+VV+ +A+ S ++ I +VID G
Sbjct: 294 PPRVLPLHPDCGRAVQA-VYEDMDA---------RKVVVTHWLADFSFSLPSIQHVIDSG 343
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
+ VYNPR+R E ++ PISK A R RA PG C LY + + P P
Sbjct: 344 LELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQP 403
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
+ NL++ VL LK+ I + F+D PAPE LM+ALE L+YL ALDDDG+L+++G
Sbjct: 404 RVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGV 463
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPR-EAQKAADEAKARFGH 550
+SEFPL P+++K L+ S +++C +E+L+++AML+ F RP A++AA + H
Sbjct: 464 ILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAA--LRRALEH 521
Query: 551 IDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSND 610
DGDH +L+ VY A+ Q+ D +WC +N AL A +R +L+ +M R L L
Sbjct: 522 TDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPA 581
Query: 611 FNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVKDNQVVHLHPSNCLDHK------PE 663
F S +++KA+++GYF++VA + TG YL + V L C + P
Sbjct: 582 FGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPPP 641
Query: 664 WVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEA 707
WV+Y+ + ++ N + V++++ + L+++AP Y+ LSN P E+
Sbjct: 642 WVLYHNFTISKDNCLSIVSEIQPQMLVELAPPYF-LSNLPPSES 684
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 246/704 (34%), Positives = 402/704 (57%)
Query: 20 VSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLK 79
+++ L + + + PG + +N ++G P+S YYE+LE+R++LP+W + FL+ L+
Sbjct: 1 MASGLAEESELSPG----ESELAVNPFDGLPFSSCYYELLEQRRALPIWAARFLFLEHLE 56
Query: 80 ANQ--VIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXX 137
++ V+++ G+ GSGK+TQIPQ+ E + + TQP
Sbjct: 57 SSPTGVVLVSGDPGSGKSTQIPQWCAE---FALARGFQTGQVTVTQPYPLAAMSLASRVA 113
Query: 138 EEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERT 197
+EMD+T+G E+GYSI EDC+ T+L++ D + L+E + + V++LDEA ER+
Sbjct: 114 DEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGAWSVLILDEAQERS 173
Query: 198 LATDVLFGLLKEV-LKNRP-DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRL--HPVEIF 253
+A+D+L GLL++ L+N P D ++VV++ KFQ ++ +P+++VP P +
Sbjct: 174 VASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFWGNSPIVRVPREPGGDPT-LA 232
Query: 254 YTQEPERDYLEAAIRTVVQIHMCEPS-GDILVFLTGEEEIEDACRKITKEITNMGDQVGP 312
Y D +EAA + V+++ E + GD+LV+L EEEI C ++ E+ + P
Sbjct: 233 YKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISLCCESLSGEMGTLAVPGPP 292
Query: 313 VKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGF 372
+V+PL+ A+Q ++E RKIVV+ +A+ S ++ I +VID G
Sbjct: 293 PRVLPLHPGCAQAIQT-VYEDTDVSV-------RKIVVTHWLADFSFSLPSIQHVIDSGL 344
Query: 373 AKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPE 432
+ VYNPR+R ES ++ PISK A R RA PG C RLY++ + + P +P+
Sbjct: 345 ELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKSTLELEAPPLPHPK 404
Query: 433 ILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEK 492
+ NL++ VL L + I + F+D PAPE LMRALE L+YL AL+DDG L+++G
Sbjct: 405 VCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAALNDDGELSDLGVI 464
Query: 493 MSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKAR--FGH 550
+SEFPL P+++K L+ S ++NC +E+L+++AML+ F RP +A EA R H
Sbjct: 465 LSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRP---PLSAGEAALRRALEH 521
Query: 551 IDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSND 610
DGDH +L+ VY A+ Q+ D +WC +N +L A +R +LV +M R L L
Sbjct: 522 ADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVELMQRIELPLSQPA 581
Query: 611 FNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVKDNQVVHLHPSNCLDHK------PE 663
F S +++KA+L+GYF++VA + TG YL + V L P ++ P
Sbjct: 582 FGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCSYRNRRTPAQPPT 641
Query: 664 WVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEA 707
WV+Y+ + ++ N + V++++ E L+++AP Y+ LSN P E+
Sbjct: 642 WVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYF-LSNLPPSES 684
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 1056 (376.8 bits), Expect = 9.2e-107, P = 9.2e-107
Identities = 247/682 (36%), Positives = 398/682 (58%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQ--VIILVGETGSGKTTQIPQ 100
+N ++G P+S YYE+LE+R++LP+W + FL+ L+++ V+++ GE GSGK+TQIPQ
Sbjct: 20 VNPFDGLPFSSCYYELLEQRRALPIWAARFLFLEHLESSPTGVVLVSGEPGSGKSTQIPQ 79
Query: 101 FVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSA 160
+ E + + TQP +EMD+T+G E+GYSI EDC+
Sbjct: 80 WCAE---FALARGFQTGQVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGP 136
Query: 161 RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLK 218
T+L++ D + L+E + + V+VLDEA ER++A+D+L GLL++ L+N P D +
Sbjct: 137 NTMLRFCWDRLFLQEVASTRGPGAWSVLVLDEAQERSVASDLLQGLLRDTRLRNLPGDPR 196
Query: 219 LVVMSATLEAEKFQGYFYGAPLMKVPGRL--HPVEIFYTQEPERDYLEAAIRTVVQIHMC 276
+V+++ + KFQ ++ +P + VP +P + Y D +EAA + V+++
Sbjct: 197 VVIVTDSALEPKFQAFWGNSPTVHVPREPGENPT-LTYKDTVPADLVEAACQAVLELCQR 255
Query: 277 EPS-GDILVFLTGEEEIEDACRKITKEITNMGDQVGPV-KVVPLYSTLPPAMQQKIFEXX 334
E + GD+LV+L EEEI C +++E+ M GP+ +V+PL+ A+Q ++E
Sbjct: 256 EEAPGDVLVYLPSEEEISLCCESLSREM-GMLAVPGPLPRVLPLHPGCGQAIQT-VYEDT 313
Query: 335 XXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 394
RKIVV+ +A+ S ++ I +VID G + VYNPR+R ES ++ ISK
Sbjct: 314 DVSV-------RKIVVTHWLADFSFSLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISK 366
Query: 395 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 454
A R RA PG C RLY++ + + + P +P++ NL++ VL LK+ I +
Sbjct: 367 CQAEARLLRARGFPPGTCLRLYSKSTLDLEAPPLPHPKVCEENLSSLVLLLKRKQIAEPG 426
Query: 455 HFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 514
F+D PAPE LM+ALE L+YL ALDDDG+L+++G +SEFPL P+++K L+ S ++NC
Sbjct: 427 ECHFLDRPAPEALMQALEDLDYLAALDDDGDLSDLGIILSEFPLPPELAKALLASCEFNC 486
Query: 515 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFG--HIDGDHLTLLNVYHAYKQNNEDP 572
+E+L+++AML+ F RP A EA R G H DGDH +L+ VY A+ Q+ D
Sbjct: 487 VDEMLTLAAMLTAAPGFTRP---PLCAGEAALRRGLEHADGDHSSLIQVYEAFVQSGADE 543
Query: 573 SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQV 632
+WC ++ AL A +R +L+ +M R L L F S +++KA+L+GYF++V
Sbjct: 544 TWCQARGLSWEALCQARKLRAELLELMQRIELPLSLPAFGSEQNRRDLQKALLSGYFLKV 603
Query: 633 AH-LERTGQYLTVKDNQVVHLHPSNCLDHK------PEWVIYNEYVLTSRNFIRTVTDVR 685
A + TG YL + V L P ++ P WV+Y+ + ++ N + TV++++
Sbjct: 604 ARDTDGTGNYLLLTHKHVAQLSPYCVYRNRRTPAQPPTWVLYHRFSISKDNCLCTVSEIQ 663
Query: 686 GEWLIDIAPHYYDLSNFPQCEA 707
E L+++AP Y+ LSN P E+
Sbjct: 664 PEMLVELAPPYF-LSNLPPSES 684
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 636 (228.9 bits), Expect = 1.9e-106, Sum P(2) = 1.9e-106
Identities = 142/368 (38%), Positives = 217/368 (58%)
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 291 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 350
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 351 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 410
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++++ +C + +L I+AML
Sbjct: 411 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 470
Query: 526 SVPNCFVRP--REAQKAAD----EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SV N F+RP E QK A+ E A+ G + D TL ++ K + SWC ++
Sbjct: 471 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 529
Query: 580 VNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNSRDYYVNIRKAMLAGYFMQVAHLER 637
++ R L SA V QL ++ + + F + V +R+ + AGYF VA
Sbjct: 530 IHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEV-LRRCLCAGYFKNVAR-RS 587
Query: 638 TGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
G+ D + VH+HPS+ L + K EW+I++E ++T++ + R V +R EW+ D+
Sbjct: 588 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 647
Query: 693 APHYYDLS 700
P ++ +
Sbjct: 648 LPKLHEFN 655
Score = 437 (158.9 bits), Expect = 1.9e-106, Sum P(2) = 1.9e-106
Identities = 91/190 (47%), Positives = 122/190 (64%)
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI TQP EEM T+G +VGY +RF+DCSS T +KY+TDG LL+ +
Sbjct: 1 MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHIL 60
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQ 232
DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K
Sbjct: 61 GDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLS 120
Query: 233 GYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFL 286
+F P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFL
Sbjct: 121 AFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFL 180
Query: 287 TGEEEIEDAC 296
TG+ EIE +C
Sbjct: 181 TGQFEIEKSC 190
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 234/717 (32%), Positives = 391/717 (54%)
Query: 6 KRKVSLFDVVDETS-VSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKS 64
++K+ + E+ +S L ++G +M + +N ++G PYS RYY+++++R+
Sbjct: 12 RKKMDFSNASPESHCISELLDSSDGEEEEILMYGEDLELNPFDGLPYSSRYYKLMKERQE 71
Query: 65 LPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQP 124
LPVW+ + F++ L +Q++I+ G+ +GK++Q+PQ+ E + R + C+Q
Sbjct: 72 LPVWKVRCAFMESLLHHQIVIVSGDAKTGKSSQVPQWCAEHC-LAAGCRHGAAV--CSQA 128
Query: 125 XXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLER 184
+EMDV IG EVGY + FE C +A T+L+Y TD ML RE M+ PLL
Sbjct: 129 HGQVAVRLALRAADEMDVNIGHEVGYFVPFESCCTAETILRYCTDDMLQREMMSAPLLNS 188
Query: 185 YKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVP 244
Y VI+LD+ HERT+ TDVL G+LK VL+ RP L+LV+++A + K Q + PL++V
Sbjct: 189 YGVIILDDVHERTVPTDVLLGVLKHVLRARPALRLVILTAPHMSSKLQDFCGSVPLIRVE 248
Query: 245 GRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEIT 304
H E+ YT +D+ +A+R + ++H + GDI++FL E++I+ A + I +E +
Sbjct: 249 NE-HQAEVVYTCSMPKDHFLSALRLLFELHHTKEKGDIVIFLACEQDIDKAYQMIRQEQS 307
Query: 305 NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGI 364
N +G + VPLY P I + RK++++T+ + + I I
Sbjct: 308 NSNPDLGELIPVPLY----PTRNDLIPKPNQDKQKCYQKYRRKVLLTTSSGGSLIRIKNI 363
Query: 365 VYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNND 424
+VID G ++KVYNPR+R +S+ PISKA A + GK F LY E+ +
Sbjct: 364 TFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILSTSPSGKLFCLYPEEFTYKE 423
Query: 425 LQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA-PETLMRALEVLNYLGALDDD 483
++P +I SNL + VL LK++ I H +F+ P P + +
Sbjct: 424 MKPDFPAKIQESNLTSMVLFLKRMDIAGFRHCEFLSRPVCPPSAKHGIRSTGKTHQTRRQ 483
Query: 484 GNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVR-PREAQKAAD 542
G+++ F + + + L + C E+L I +L PNCF+ P ++ A
Sbjct: 484 GSISAHSYLSQNFGILNKKGESLSVPCSFTCHTEVLPIHVLLHAPNCFLHTPSGTEEIAL 543
Query: 543 EAKARFGHIDGDHLTLLNVYHAYKQ---NN-----EDPSWCYDNFVNHRALKSADNVRQQ 594
+F H GDH TL+NV++A+++ N+ + WC + F++ AL+ A+ +R +
Sbjct: 544 TCWRKFSHPAGDHFTLINVFNAFREASTNSAGQCCSNEKWCRNYFLSCSALRMAEMIRAE 603
Query: 595 LVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVKDNQVVHLH 653
LV IM R L + + DF S + ++I+KA+L+GYFMQ+A ++ +G YL + QV LH
Sbjct: 604 LVEIMKRIELPISAPDFGSPENTLSIKKALLSGYFMQIARDVDGSGNYLMLTHRQVAKLH 663
Query: 654 PSNCLDH---KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEA 707
P + + PEWV+++E+ ++ N IR V+++ +++AP YY SN P E+
Sbjct: 664 PFSSYYYTRRSPEWVLFHEFSISEDNSIRVVSEISPHLFVELAPQYY-FSNLPPSES 719
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 248/655 (37%), Positives = 380/655 (58%)
Query: 59 LEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMM 118
LE + LPV +++ E + ++ NQV+I+ GETGSGKTTQ+P+ LE R +
Sbjct: 68 LEYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEA------GRGIQGY 121
Query: 119 IACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMT 178
I TQP +E+ +GE VGY +RF D + +++K +TDG+LL E T
Sbjct: 122 IGHTQPRRIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQT 181
Query: 179 DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGA 238
D L++Y +++DEAHER+L D L G LK +L R DLKLV+ SAT++ E+F +F A
Sbjct: 182 DRFLDQYDTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNA 241
Query: 239 PLMKVPGRLHPVEIFY---------TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGE 289
P+++VPGR +PVEI Y + E ER +A + V ++H E +GDIL+FL+GE
Sbjct: 242 PIVRVPGRTYPVEIRYRPPDSAEEESDETERGEQQAILDAVDELHR-ENTGDILIFLSGE 300
Query: 290 EEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIV 349
EI D + K + D +V+PLYS L + Q+KIF+ R+IV
Sbjct: 301 REIRDTAESLRKH--HPAD----CEVLPLYSRLTVSEQEKIFKPHGR---------RRIV 345
Query: 350 VSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQP 409
++TN+AETSLT+ GI VID G+A+ Y+ R +++ L + IS+ASA+QR+GR GR P
Sbjct: 346 LATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGP 405
Query: 410 GKCFRLYTEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLM 468
G C RLY+E+ F N +P+ T PEILR+NLA +L +K L + D+ F F++PP E L+
Sbjct: 406 GVCIRLYSEQDFLN--RPEFTDPEILRTNLAAVILQMKALNLGDIRVFPFVEPP-DERLV 462
Query: 469 R-ALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV 527
R L L + ALD G LTE+G +++ P+DP++ ++L+ + NC +E+ I A LSV
Sbjct: 463 RDGLRTLQEINALDAQGRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALSV 522
Query: 528 PNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS------WCYDNFVN 581
P+ RP + +AAD+ ARF H D D + +L +++ Y++ + S +C DNF++
Sbjct: 523 PDPRERPADKAQAADQKHARFRHPDSDFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLS 582
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 641
++ ++ QQ++ ++ + L L N + DY I +A+L G V + +Y
Sbjct: 583 ALRMREWRDIHQQILEVV-KGELGLRPNQVPA-DYG-EIHRALLTGLLCHVGFRQDQNEY 639
Query: 642 LTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPH 695
+ V+ Q + P + L +P W+I E V TSR + RTV + EW+ H
Sbjct: 640 VGVR-GQKFQIFPGSFLFKTRPVWIISAEQVETSRVYARTVARIEPEWIEKCGAH 693
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 247/700 (35%), Positives = 396/700 (56%)
Query: 24 LVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQ- 82
L + +G PG + +N ++G P+S RYYE+LE+R++LP+W + FL+ L+++
Sbjct: 8 LAEESGPSPG----ESELAVNPFDGLPFSSRYYELLEQRRALPIWATRFIFLEQLESSPS 63
Query: 83 -VIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMD 141
V+++ GE GSGK+TQIPQ+ E ++ + TQP +EMD
Sbjct: 64 GVVLVSGEPGSGKSTQIPQWCAE---FALARGFKEGRVTVTQPYPLAALSLAVRVADEMD 120
Query: 142 VTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATD 201
+T+G+EVGYSI EDC+ T+L++ D +LL+E + + V+VLDEA ER++A+D
Sbjct: 121 LTLGQEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASD 180
Query: 202 VLFGLLKEV-LKNRP-DLKLVVMSATLEAEKFQGYFYGAPLM----KVPGRLHPVEIFYT 255
+L GLL+ L N P D ++VV++ K Q F+G P + + PG P ++
Sbjct: 181 LLQGLLRNAKLGNLPGDSRVVVVTDPALEPKLQA-FWGNPTIVHVPRGPGAC-PTPVYRD 238
Query: 256 QEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
P D +EAA + V+++ E GD+LV+L EEEI C +++E+ + + P +V
Sbjct: 239 IVPT-DRVEAACQAVLELCAKEAPGDVLVYLPSEEEILQCCESLSREVEPLALRGPPPRV 297
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
+PL+ PA+Q +E RK+VV+ +A+ S ++ I +VID G +
Sbjct: 298 LPLHPGHGPAVQAA-YEDIDLGA-------RKVVVTHWLADFSFSLPSIRHVIDSGLELR 349
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
VYNP++R ES ++ PIS+ A R RA PG C LY E + P +
Sbjct: 350 SVYNPQIRAESQVLRPISRCQAEARRLRARGIPPGSCICLYPESFLELEAPLLPPPRVCE 409
Query: 436 SNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSE 495
NL+ VL LK+ I + F+D PAPE LM+ALE L+YL ALDDDGNL+++G +SE
Sbjct: 410 ENLSPMVLLLKRRQIAEPGECHFLDRPAPEALMQALEDLDYLAALDDDGNLSDLGVILSE 469
Query: 496 FPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPR-EAQKAADEAKARFGHIDGD 554
FPL P+++K L+ S +++C +E+L+++AML+ F P A++AA + H DGD
Sbjct: 470 FPLPPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTHPPLSAEEAA--LRRALEHADGD 527
Query: 555 HLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSR 614
H +L+ VY A+ Q+ D +WC +N AL A +R +L+ +M + L L F S
Sbjct: 528 HSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAQKLRGELLELMQQIELPLSQPAFGSE 587
Query: 615 DYYVNIRKAMLAGYFMQVAH-LERTGQYLTVKDNQVVHLHPSNCLDHK------PEWVIY 667
+++KA+++GYF++VA + TG YL + V L P C + P WV+Y
Sbjct: 588 QNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCCYRSRRSPARSPPWVLY 647
Query: 668 NEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEA 707
+ + ++ N + V++++ + L+++AP Y+ LSN P E+
Sbjct: 648 HSFSISKDNCLSIVSEIQPQMLVELAPPYF-LSNLPPSES 686
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 244/681 (35%), Positives = 395/681 (58%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQ--VIILVGETGSGKTTQIPQ 100
+N ++G P+S RYY++LE+R+SLPVW + FL+ L+++ V+++ GE G GK+TQIPQ
Sbjct: 23 VNPFDGLPFSSRYYKLLEQRRSLPVWAARFIFLEHLESSPSGVVLVSGEPGCGKSTQIPQ 82
Query: 101 FVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSA 160
+ E V +K + TQP +EMD+T+G EVGYSI EDC+
Sbjct: 83 WCAEFV---LARGFQKGWVTVTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGP 139
Query: 161 RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLK 218
T+L++ D +LL+E + V++LDEA ER++A+D+L GLL++ L + P DL+
Sbjct: 140 DTLLRFCWDRLLLQEVASTRGTGARGVLILDEAQERSVASDLLQGLLRDARLGSLPGDLR 199
Query: 219 LVVMSATLEAEKFQGYFYGAPLMKVPGRLH--PVEIFYTQEPERDYLEAAIRTVVQIHMC 276
+VV++ K Q ++ G P + VP + P ++ P D ++AA + V++
Sbjct: 200 VVVVTDPSLEPKLQDFWGGPPTVCVPRKTGSCPTPVYRDSLPA-DRVDAACQAVLEWCQE 258
Query: 277 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXX 336
E GD+LV+L EEEI C +++++ ++ +Q P +V+PL+ A+Q ++E
Sbjct: 259 EAPGDVLVYLPSEEEISLCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYEDTES 317
Query: 337 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
RK+VV+ +A+ S ++ I +VID G + VY+P++R ES ++ P+SK
Sbjct: 318 GA-------RKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQ 370
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQT-YPEILRSNLANTVLTLKKLGIDDLVH 455
A R RA PG C LY KSF P P + NL++ +L LK+ I +
Sbjct: 371 AEARRLRAAGIPPGSCLCLYP-KSFLELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGK 429
Query: 456 FDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCS 515
F+D PAPE LM+ALE L+YL ALDDDG+L+++G +SEFPL P+++K L+ S +++C
Sbjct: 430 CHFLDRPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCV 489
Query: 516 NEILSISAMLSVPNCFVRPREAQKAADEAKAR--FGHIDGDHLTLLNVYHAYKQNNEDPS 573
+E+L+++AML+ F RP A+EA R H+DGDH +L+ VY A+ Q+ D +
Sbjct: 490 DEMLTLAAMLTAAPGFTRP---PVCAEEAALRRALEHVDGDHSSLIQVYEAFIQSGADKA 546
Query: 574 WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVA 633
WC +N AL A +R +L+ +M R L L F S +++KA+++GYF++VA
Sbjct: 547 WCQARGLNWAALCQARKLRGELLELMQRIELPLSQPAFGSERNRRDLQKALVSGYFLKVA 606
Query: 634 H-LERTGQYLTVKDNQVVHLHPSNCLDHK------PEWVIYNEYVLTSRNFIRTVTDVRG 686
+ TG YL + V L P+ C + P WV+Y+ + ++ N + V++++
Sbjct: 607 RDTDGTGNYLLLTHKHVAQLSPNCCYRSRRAPARPPLWVLYHSFSISKDNCLSIVSEIQP 666
Query: 687 EWLIDIAPHYYDLSNFPQCEA 707
+ L+++AP Y+ LSN P E+
Sbjct: 667 QMLVELAPPYF-LSNLPPSES 686
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
Identities = 237/653 (36%), Positives = 375/653 (57%)
Query: 65 LPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQP 124
LPV Q++++ Q + +QV+I+ GETGSGKTTQ+P+ E R + +I TQP
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAE------LGRGKYGLIGHTQP 140
Query: 125 XXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLER 184
EEM+ +G VGY +RF D S +T +K +TDG+LL E D L +
Sbjct: 141 RRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQ 200
Query: 185 YKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVP 244
Y I++DEAHER+L D + G LK++L RPDLK+++ SAT++ E+F +F AP+++V
Sbjct: 201 YDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVS 260
Query: 245 GRLHPVEIFYT-------QEPERDYLEAAIRTVVQIHMCEPS-GDILVFLTGEEEIEDAC 296
GR +PVE+ Y E +RD LE + V ++ C+ GDIL+F+ GE EI D
Sbjct: 261 GRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDEL--CDEGLGDILIFMNGEREIRDTA 318
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAE 356
++K N+ D ++VPLY+ L Q KIF+ R+IV++TN+AE
Sbjct: 319 DALSKR--NLRD----TEIVPLYARLSAGEQNKIFQPHAG---------RRIVLATNVAE 363
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TSLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+QR GR GRT+ G C RLY
Sbjct: 364 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLY 423
Query: 417 TEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLN 475
+E+ F + +P+ T PEILR+NLA+ +L + LG+ D+ F F++ P + + +L
Sbjct: 424 SEEDFLS--RPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLE 481
Query: 476 YLGALDDD-----GNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC 530
LGA++D LTE G++++ P+DP++++M++E+ K C E++ I++ LS+ +
Sbjct: 482 ELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDP 541
Query: 531 FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ------NNEDPSWCYDNFVNHRA 584
RP + Q++AD+ RF H D D LTL+N++H Q +N+ C +++N+
Sbjct: 542 RERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLR 601
Query: 585 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERT-GQYLT 643
++ +V QL + KL ND Y+ + A+L G + ++ +Y
Sbjct: 602 VREWQDVYTQLHQSTREMGFKL--ND-EPGSYHA-VHSAILVGLLSHIGMKDQEKNEYHG 657
Query: 644 VKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPH 695
+ N ++ P++ L K P+WV+ E V TS+ + R V + +W+ +A H
Sbjct: 658 AR-NARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKH 709
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
Identities = 237/653 (36%), Positives = 375/653 (57%)
Query: 65 LPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQP 124
LPV Q++++ Q + +QV+I+ GETGSGKTTQ+P+ E R + +I TQP
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAE------LGRGKYGLIGHTQP 140
Query: 125 XXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLER 184
EEM+ +G VGY +RF D S +T +K +TDG+LL E D L +
Sbjct: 141 RRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQ 200
Query: 185 YKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVP 244
Y I++DEAHER+L D + G LK++L RPDLK+++ SAT++ E+F +F AP+++V
Sbjct: 201 YDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVS 260
Query: 245 GRLHPVEIFYT-------QEPERDYLEAAIRTVVQIHMCEPS-GDILVFLTGEEEIEDAC 296
GR +PVE+ Y E +RD LE + V ++ C+ GDIL+F+ GE EI D
Sbjct: 261 GRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDEL--CDEGLGDILIFMNGEREIRDTA 318
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAE 356
++K N+ D ++VPLY+ L Q KIF+ R+IV++TN+AE
Sbjct: 319 DALSKR--NLRD----TEIVPLYARLSAGEQNKIFQPHAG---------RRIVLATNVAE 363
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TSLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+QR GR GRT+ G C RLY
Sbjct: 364 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLY 423
Query: 417 TEKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLN 475
+E+ F + +P+ T PEILR+NLA+ +L + LG+ D+ F F++ P + + +L
Sbjct: 424 SEEDFLS--RPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLE 481
Query: 476 YLGALDDD-----GNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC 530
LGA++D LTE G++++ P+DP++++M++E+ K C E++ I++ LS+ +
Sbjct: 482 ELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDP 541
Query: 531 FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ------NNEDPSWCYDNFVNHRA 584
RP + Q++AD+ RF H D D LTL+N++H Q +N+ C +++N+
Sbjct: 542 RERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLR 601
Query: 585 LKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERT-GQYLT 643
++ +V QL + KL ND Y+ + A+L G + ++ +Y
Sbjct: 602 VREWQDVYTQLHQSTREMGFKL--ND-EPGSYHA-VHSAILVGLLSHIGMKDQEKNEYHG 657
Query: 644 VKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPH 695
+ N ++ P++ L K P+WV+ E V TS+ + R V + +W+ +A H
Sbjct: 658 AR-NARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKH 709
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 237/661 (35%), Positives = 375/661 (56%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+LPV +E+ + + ANQV+I+ GETGSGKTTQ+P+ LE + R I TQ
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLE---LGLGSRG---FIGHTQ 128
Query: 124 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
P EE+ +GE VG+ +RF D + + +K +TDG+LL E +D L+
Sbjct: 129 PRRLAARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLD 188
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKV 243
+Y I++DEAHER+L D + G LK++LK RPDLK+++ SAT++ E+F +F AP+++V
Sbjct: 189 QYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEV 248
Query: 244 PGRLHPVEIFY---TQEPERDY--LEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRK 298
GR +PVE Y Q+ E D +E V ++ + E GDIL+F+ GE EI D +
Sbjct: 249 SGRTYPVETRYRPLVQDTEADLDQIEGIFAAVDEL-VAEGLGDILIFMNGEREIRDTAEQ 307
Query: 299 ITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETS 358
+ + N D +++PLY+ L Q K+F R+IV++TN+AETS
Sbjct: 308 LNRR--NYRD----TEILPLYARLSYGEQSKVFSSHTG---------RRIVLATNVAETS 352
Query: 359 LTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTE 418
LT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+QR GR GR PG C RLY E
Sbjct: 353 LTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDE 412
Query: 419 KSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
FNN +P T PEILR+NLA+ +L + +G+ D+ F F++PP P + +L L
Sbjct: 413 ADFNN--RPAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEEL 470
Query: 478 GALDDD-GN--LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRP 534
A+ GN LT +G ++S+ P+DP++++M++ES + C NE+L I++ LS+ + RP
Sbjct: 471 QAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERP 530
Query: 535 REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSW------CYDNFVNHRALKSA 588
+ ++A+DEA RF D ++ +N++ K+ ++ S C D ++ + ++
Sbjct: 531 MDKKQASDEAHRRFADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREW 590
Query: 589 DNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQ 648
++ QL + A +LK ND + Y + +A+L+G + + +YL + N+
Sbjct: 591 QDLYTQLKQ--AVHDLKWRLNDTPAN--YDALHRALLSGLLSHIGFKDNNNEYLGAR-NR 645
Query: 649 VVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNF-PQCE 706
+ P + L K P+W++ E + TS+ F R + EWL +A H ++ P E
Sbjct: 646 KFFVFPGSPLAKKGPKWIMAAELMETSKLFARCCAKIEPEWLEPLAAHLIKKNHLEPHFE 705
Query: 707 A 707
A
Sbjct: 706 A 706
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 237/661 (35%), Positives = 375/661 (56%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+LPV +E+ + + ANQV+I+ GETGSGKTTQ+P+ LE + R I TQ
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLE---LGLGSRG---FIGHTQ 128
Query: 124 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
P EE+ +GE VG+ +RF D + + +K +TDG+LL E +D L+
Sbjct: 129 PRRLAARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLD 188
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKV 243
+Y I++DEAHER+L D + G LK++LK RPDLK+++ SAT++ E+F +F AP+++V
Sbjct: 189 QYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEV 248
Query: 244 PGRLHPVEIFY---TQEPERDY--LEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRK 298
GR +PVE Y Q+ E D +E V ++ + E GDIL+F+ GE EI D +
Sbjct: 249 SGRTYPVETRYRPLVQDTEADLDQIEGIFAAVDEL-VAEGLGDILIFMNGEREIRDTAEQ 307
Query: 299 ITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETS 358
+ + N D +++PLY+ L Q K+F R+IV++TN+AETS
Sbjct: 308 LNRR--NYRD----TEILPLYARLSYGEQSKVFSSHTG---------RRIVLATNVAETS 352
Query: 359 LTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTE 418
LT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+QR GR GR PG C RLY E
Sbjct: 353 LTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDE 412
Query: 419 KSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
FNN +P T PEILR+NLA+ +L + +G+ D+ F F++PP P + +L L
Sbjct: 413 ADFNN--RPAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEEL 470
Query: 478 GALDDD-GN--LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRP 534
A+ GN LT +G ++S+ P+DP++++M++ES + C NE+L I++ LS+ + RP
Sbjct: 471 QAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERP 530
Query: 535 REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSW------CYDNFVNHRALKSA 588
+ ++A+DEA RF D ++ +N++ K+ ++ S C D ++ + ++
Sbjct: 531 MDKKQASDEAHRRFADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREW 590
Query: 589 DNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQ 648
++ QL + A +LK ND + Y + +A+L+G + + +YL + N+
Sbjct: 591 QDLYTQLKQ--AVHDLKWRLNDTPAN--YDALHRALLSGLLSHIGFKDNNNEYLGAR-NR 645
Query: 649 VVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNF-PQCE 706
+ P + L K P+W++ E + TS+ F R + EWL +A H ++ P E
Sbjct: 646 KFFVFPGSPLAKKGPKWIMAAELMETSKLFARCCAKIEPEWLEPLAAHLIKKNHLEPHFE 705
Query: 707 A 707
A
Sbjct: 706 A 706
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 790 (283.2 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 193/506 (38%), Positives = 289/506 (57%)
Query: 217 LKLVVMSATLEAEKFQGYF---YGA-PLMK-------------VPGRLHPVEIFYTQEPE 259
LK VVMSAT + E Q +F Y A L K + GR PV+ Y+ EP
Sbjct: 322 LKAVVMSATADMESLQEFFVEGYKARELQKEEKSEKDGIAVCHIKGRQFPVKTIYSPEPV 381
Query: 260 RDYLEAAIRTVVQIHMCEP-SGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 318
D+++AA++ + QIH EP GDILVFLTG+E +E + + T M + ++V+PL
Sbjct: 382 HDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVEALENLVNEYATGMDPSLPKIQVLPL 441
Query: 319 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 378
++ LP A QQ++F RKI+++TNIAETS+T+ G+ YV+D G AK K +
Sbjct: 442 FAALPQAAQQRVF-------VPAPPRTRKIILATNIAETSVTVSGVRYVVDCGKAKIKQF 494
Query: 379 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 438
R+ ++SLLV PISK++A QR GRAGR PG+C+RLYTEK + L PEILR +L
Sbjct: 495 RTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEKDYLA-LDEVNTPEILRCDL 553
Query: 439 ANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPL 498
+ +L +K G+D+++ F F+ P E L +AL L + ALD+ G ++E G +++ PL
Sbjct: 554 SQAILNMKARGVDNVIEFPFLTRPPREALEKALLQLLSIEALDETGKISETGSHIAKLPL 613
Query: 499 DPQMSKMLVESPKY--NCSNEILSISAMLSVPNCFVRP--REAQKAADEAKARFGHIDGD 554
P + ++L+ + + +C +++ I + LSV N F+ E ++AA+ A+ +GD
Sbjct: 614 TPTLGRVLLAASDFGPDCLTDVIDIISCLSVENIFLNTTSEEKKEAAEAARRDLYRREGD 673
Query: 555 HLTLLNVYHAYKQNNED-PSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNS 613
HLT+L AY N D +W + V+HRA++S +VR+QL R KL + S
Sbjct: 674 HLTMLATVRAYASENTDRKAWAERHLVSHRAMQSVMDVRKQLTA-QCR-QAKLLPSPTES 731
Query: 614 RDYY---------VNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKPE 663
RD V I K+ L G+ A L G Y TV NQ V +HPS+ L K E
Sbjct: 732 RDSDSSSIREPSPVFILKSFLRGFATNTARLVPDGSYRTVVGNQTVAIHPSSVLFGKKVE 791
Query: 664 WVIYNEYVLTSRNFIRTVTDVRGEWL 689
++YNE+V T+R++ R V+ V+ +W+
Sbjct: 792 AILYNEFVFTNRSYARGVSAVQMDWV 817
Score = 216 (81.1 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 50/128 (39%), Positives = 71/128 (55%)
Query: 119 IACTQPXXXXXXXXXXXXXEEMDVTIGE-----EVGYSIRFEDCSSARTVLKYLTDGMLL 173
IA TQP EEM +G +VGYS+RF+ S T +K+LT+GMLL
Sbjct: 213 IAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTSVSPSTRVKFLTEGMLL 272
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD------LKLVVMSATLE 227
+E + DP L +Y IV+DE HER + D++ G L+ ++ + + LK VVMSAT +
Sbjct: 273 QEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREGRGGVPLKAVVMSATAD 332
Query: 228 AEKFQGYF 235
E Q +F
Sbjct: 333 MESLQEFF 340
Score = 140 (54.3 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 38/109 (34%), Positives = 57/109 (52%)
Query: 49 KPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG--- 105
K +Q YEI RK+LP++ +E Q L+ N V++L+GETGSGK+TQIPQF+++
Sbjct: 134 KKKAQMLYEI---RKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVDESWC 190
Query: 106 ------VDIETPDRRRKMM---IACTQPXXXXXXXXXXXXXEEMDVTIG 145
+ E ++ ++ IA TQP EEM +G
Sbjct: 191 RPTKTTIVQENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLG 239
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
Identities = 230/651 (35%), Positives = 366/651 (56%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+LPV Q+K++ L+ ++ +QV+I+ GETGSGKTTQ+P+ +E R K +I TQ
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME------LGRGIKGLIGHTQ 129
Query: 124 PXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
P EE+ G +GY +RF D S T++K +TDG+LL E D LL
Sbjct: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKV 243
+Y I++DEAHER+L D L G LKE+L RPDLK+++ SAT++ E+F +F AP+++V
Sbjct: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249
Query: 244 PGRLHPVEIFY------TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
GR +PVE+ Y + ERD L+A V ++ E GDIL+F++GE EI D
Sbjct: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTAD 308
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAET 357
+ K N+ +++PLY+ L + Q ++F+ R+IV++TN+AET
Sbjct: 309 ALNK--LNLRH----TEILPLYARLSNSEQNRVFQSHSG---------RRIVLATNVAET 353
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+QR GR GR G C RLY+
Sbjct: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413
Query: 418 EKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
E F + +P+ T PEILR+NLA+ +L + LG+ D+ F F++ P + + +L
Sbjct: 414 EDDFLS--RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471
Query: 477 LGALDDDGN-----LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCF 531
LGA+ D LT +G ++S+ P+DP++++M++E+ K+ C E + I++ LS+ +
Sbjct: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531
Query: 532 VRPREAQKAADEAKARFGHIDGDHLTLLNV--YHAYKQ----NNEDPSWCYDNFVNHRAL 585
RP + Q+A+DE RF + D L +N+ Y +Q +N C +++N+ +
Sbjct: 532 ERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591
Query: 586 KSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVK 645
+ ++ QL +++ + + S R+ ++ A+L G + + Q T
Sbjct: 592 REWQDIYTQLRQVVKELGIPVNSEPAEYREIHI----ALLTGLLSHIGMKDADKQEYTGA 647
Query: 646 DNQVVHLHPSNCLDHKP-EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPH 695
N + P + L KP +WV+ E V TSR + R + EW+ +A H
Sbjct: 648 RNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 851 (304.6 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
Identities = 215/625 (34%), Positives = 332/625 (53%)
Query: 4 ERKRKVSLFDVVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEI-LEK- 61
++++K+ + + T KL KT P N + + S ++E EK
Sbjct: 99 KKEKKIEVTTI--STQTPKKLPKTPISTPSNSKNATPMSTRKHSSSQQSPPHFEANYEKF 156
Query: 62 -RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQF-VLEGVDIETPDRRRKMMI 119
R LP+ +++ + L + + +I++GETGSGK+TQ+PQ V G+ I
Sbjct: 157 SRPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGI-------ANSGSI 209
Query: 120 ACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTD 179
A TQP EM IG VGY +RFE+ + +T ++Y+TDG++LR+A+
Sbjct: 210 AVTQPRRVAAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVS 269
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD----LKLVVMSATLEAEKFQGYF 235
PLL++Y +++DEAHER+L +DVL +L++ R + L+L++MSATL+AEKFQ YF
Sbjct: 270 PLLDKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYF 329
Query: 236 YGAPLMKVPGRLHPVEIFYTQEP------ERDYLEAAIRTVVQIHMCEPSG-DILVFLTG 288
A ++ V GR P+E+F+ DY+ A+ V +H+ EP G DILVFLTG
Sbjct: 330 NNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKGRDILVFLTG 389
Query: 289 EEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKI 348
EEIE ++ + ++ + VPLY+ L P Q++ F RK+
Sbjct: 390 SEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGA-------RKV 442
Query: 349 VVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQ 408
++STNIAETS+TI GI VID G K K + R++ L V +SKA A QR+GRAGR
Sbjct: 443 IISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDA 502
Query: 409 PGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLM 468
PGKC+RLY+ + F+ + + PEILR NL+ T L L KLG+ + +DPP + +
Sbjct: 503 PGKCYRLYSREDFHK-FEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNIN 561
Query: 469 RALEVLNYLGAL---DDDGN---LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
AL L LGA+ + D + LTEMG+ +PL P +++L ++ K C E + I
Sbjct: 562 AALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIV 621
Query: 523 AMLSVPNCFVRPREAQKAAD--EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFV 580
A + F +++ AD + RF +GDH+TLL + Q + + ++
Sbjct: 622 AAMQTDALFSGAGDSKSDADVDRIRRRFETREGDHITLLKLVLVTNQFFDQLNKKTESDA 681
Query: 581 NH-RALKSADNVRQQLVRIMARFNL 604
+ +A KS + Q +R N+
Sbjct: 682 RYGKANKSLEREYNQTIRKFCNDNM 706
Score = 148 (57.2 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
Identities = 35/121 (28%), Positives = 63/121 (52%)
Query: 574 WCYDNFVNHRALKSADNVRQQL--VRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQ 631
+C DN +N + LK+A + +QL + I + C DF + +RKA+ G F+
Sbjct: 701 FCNDNMINEQHLKTASMIEEQLKQIAIEQKVTFSTCGADF------MKMRKALALGMFLN 754
Query: 632 VAHLERT-GQY-LTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEW 688
+R +Y L + + +HPS+CL KP +++++E + T+ F VT + G+W
Sbjct: 755 SCEYDRQEDRYRLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDGDW 814
Query: 689 L 689
+
Sbjct: 815 V 815
Score = 39 (18.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 59 LEKRKSLPVWQQKEEFLQVLKANQVI 84
+E + P W++K+ Q+ K + I
Sbjct: 1 MEIKSKFPAWKKKKRKFQIDKDGKKI 26
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 221/572 (38%), Positives = 337/572 (58%)
Query: 160 ARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK----NRP 215
A T +KY+TDG LL+ + DP L ++ VI+LDEAHERTL TD+LFGLLK++ + NR
Sbjct: 65 AETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRK 124
Query: 216 D-LKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIR 268
+ LK+VVMSAT+E K +F P+ +PGRL+PV E F RD Y++A ++
Sbjct: 125 EHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVK 184
Query: 269 TVVQIHMCEPSGDILVFLTGEEEIEDACR---KITKEIT---NMGDQ-VGPVKVVPLYST 321
+ IH+ E +GDILVFLTG+ EIE +C ++ + + ++ D + + ++P Y +
Sbjct: 185 VTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGS 244
Query: 322 LPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR 381
+ Q++IF RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR
Sbjct: 245 MTTDQQRRIF-------LPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPR 297
Query: 382 VRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANT 441
+ ++ L V PISK+ A QRSGRAGRT GKCFR+Y++ +N + PEI R++L +
Sbjct: 298 LGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSV 357
Query: 442 VLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQ 501
VLTLK L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P
Sbjct: 358 VLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPH 417
Query: 502 MSKMLVESPKYNCSNEILSISAMLSVPNCFVRP--REAQKAAD----EAKARFGHIDGDH 555
++ ++++ +C + +L I+AMLSV N F+RP E QK A+ E A+ G + D
Sbjct: 418 LTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DF 476
Query: 556 LTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK--LCSNDFNS 613
TL ++ K + SWC ++++ R L SA V QL ++ + + F
Sbjct: 477 ATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEG 536
Query: 614 RDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQ--VVHLHPSNCL---DHKPEWVIYN 668
+ V +R+ + AGYF VA G+ D + VH+HPS+ L + K EW+I++
Sbjct: 537 PKHEV-LRRCLCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFH 594
Query: 669 EYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 700
E ++T++ + R V +R EW+ D+ P ++ +
Sbjct: 595 EVLVTTKVYARIVCPIRYEWVRDLLPKLHEFN 626
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 814 (291.6 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
Identities = 200/583 (34%), Positives = 312/583 (53%)
Query: 148 VGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLL 207
VGYS+RF+ T +K+LT+GMLL+E + DP L +Y +V+DE HER + D+L G L
Sbjct: 225 VGYSVRFDHNVPKGTKIKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFL 284
Query: 208 KEVL--KNRPD-----LKLVVMSATLEAEKFQGYFY---------------GAPLMKVPG 245
K++L ++P LK+V MSAT E + +F +K+ G
Sbjct: 285 KQMLLSPDKPGRGGLPLKVVAMSATANIETLENFFSIPQDDRKAKAESDGKAEQTLKIEG 344
Query: 246 RLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDILVFLTGEEEIEDACRKITKEIT 304
R PVEI ++ +P + ++TV +IH EP GDILVFL G+E IE+ R I +
Sbjct: 345 RQFPVEIIHSPKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLIEEYAA 404
Query: 305 NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGI 364
+ V +K +PL+ L Q F RK+V++TNIAETS+T+ G+
Sbjct: 405 TLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRV-------RKVVLATNIAETSVTVPGV 457
Query: 365 VYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNND 424
YVID G +K K Y + +ESLLV ISK+SA QR+GRAGR PGKC+RLYTE + +
Sbjct: 458 RYVIDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVYK-E 516
Query: 425 LQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDG 484
++ PEILR+N+ L + G+DDL+ F MD P + +A+ LN LGA+DD+G
Sbjct: 517 MRDADLPEILRNNVREAALIMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEG 576
Query: 485 NLTEMGEKMSEFPLDPQMSKMLVE--SPKYNCSNEILSISAMLSV-PNCF--VRPREAQK 539
+TE+G+KM+ P+ + ++L+ SP Y+C E++ I + +S + F ++ EA++
Sbjct: 577 AITELGKKMARLPVAAPLGRVLLAAASPAYDCLLEVIDIISCISGGDDIFHQLQSEEARE 636
Query: 540 AADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-WCYDNFVNHRALKSADNVRQQLVRI 598
+E + +GD + L Y N D + WC +N R ++ A N+R+QL +
Sbjct: 637 EVEEYRRELRRREGDLMVYLTTMQMYTAENSDRTEWCKKRKINLRTMRQALNIRRQLRSL 696
Query: 599 MARFNLKLCSNDFNSRDYYV--------NIRKAMLAGYFMQVAHLERTGQYLTVKDNQVV 650
+ L +V I K + G+ A L Y+T + VV
Sbjct: 697 CVSEGM-LTEKPPPDPQPFVPLSPEAAETITKCFMKGFCTSTAMLAPDLSYVTSQGKHVV 755
Query: 651 HLHPSNCLD-HKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
+HPS+ L K E +++ E+V T +++ + V ++ W+ ++
Sbjct: 756 AIHPSSSLHGQKKEAIMFLEHVFTQKSYAKKVAVIQSVWIPEV 798
Score = 143 (55.4 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG-------VDIET 110
+L RK+LP+WQ + + L+ N V+ILVGETGSGK+TQ+PQF+ + V +
Sbjct: 110 LLPLRKALPIWQHQGAIREHLRKNDVLILVGETGSGKSTQVPQFLADEEWCRPRQVIMTL 169
Query: 111 PDRR---RKM--MIACTQP 124
P+ R RK+ MIA TQP
Sbjct: 170 PNGRKEQRKVGGMIAVTQP 188
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 566 (204.3 bits), Expect = 8.4e-92, Sum P(2) = 8.4e-92
Identities = 154/441 (34%), Positives = 235/441 (53%)
Query: 261 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 320
D +EA I + ++ E G ILVFLTG +EI KI +GD V+PL+
Sbjct: 488 DLVEATIEHICRL---EGGGAILVFLTGWDEISKLLEKINMN-NFLGDS-SKFLVLPLHG 542
Query: 321 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 380
++P Q++IF+ RKIV++TNIAE+S+TID +VYV+D G AK+ Y+
Sbjct: 543 SMPTVNQREIFDRPPPNK-------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 595
Query: 381 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ-TYPEILRSNLA 439
+V LL S ISKASAHQR GRAGR Q G C+RLY + + D PQ PEI+R+ L
Sbjct: 596 LNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIY--DAFPQYQLPEIIRTPLQ 653
Query: 440 NTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFP 497
L +K L + + F + PP + A+E+L +GAL+D LT +G + P
Sbjct: 654 ELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLP 713
Query: 498 LDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARF-GHIDGDHL 556
+DP + KML+ + C N L+I+A L+ + FV P ++ ADEAK F G DH+
Sbjct: 714 VDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHI 773
Query: 557 TLLNVYHAY---KQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNL--KLCSNDF 611
LL Y Y K+ + +C+ NF++ L+ +++R Q + +++ K N +
Sbjct: 774 ALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAY 833
Query: 612 NSRDYYVNIRKAML-AGYFMQVAHLERTGQYLT--VKDNQVVHLHPSNC-----LDHKPE 663
N Y + + A+L AG + V +R G+ K+ V +HP + L P
Sbjct: 834 NQYSYDMEMISAVLCAGLYPNVVQCKRRGKRTAFYTKELGKVDIHPGSVNARVNLFSLP- 892
Query: 664 WVIYNEYVLTSRNFIRTVTDV 684
+++Y+E V T+ +IR T++
Sbjct: 893 YLVYSEKVKTTSVYIRDSTNI 913
Score = 384 (140.2 bits), Expect = 8.4e-92, Sum P(2) = 8.4e-92
Identities = 83/193 (43%), Positives = 115/193 (59%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIAC 121
R+ LP ++ KEEFL + NQV+++ GETG GKTTQ+PQF+LE +I + R I C
Sbjct: 225 REKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEE-EISSL-RGADCNIIC 282
Query: 122 TQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
TQP E +IGE VGY IR E S +T L + T G+LLR + DP
Sbjct: 283 TQPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPN 342
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLM 241
L +++DE HER + D L +L+++L RPDL+L++MSAT+ A+ F YF +P M
Sbjct: 343 LTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTM 402
Query: 242 KVPGRLHPV-EIF 253
+PG PV E+F
Sbjct: 403 HIPGFTFPVAELF 415
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 539 (194.8 bits), Expect = 1.4e-91, Sum P(2) = 1.4e-91
Identities = 141/431 (32%), Positives = 238/431 (55%)
Query: 277 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXX 336
E G +LVF+TG ++I ++ + +GD V ++ + ++ + Q+ IF+
Sbjct: 576 ERPGAVLVFMTGWDDINSLKNQLEAH-SLLGDP-NKVLLLACHGSMASSEQRLIFDRPPE 633
Query: 337 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
RKIV++TN+AETS+TI+ +VYVID G AK+ Y+ LL S ISKA+
Sbjct: 634 GI-------RKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAA 686
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QR GRAGR PG+C+ LY + Q PE+LR+ L + L +K LG+ + F
Sbjct: 687 ARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQ-PELLRTPLQSLCLQIKSLGLGSISEF 745
Query: 457 --DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 514
+ PP ++ A+E L +GALDDD NLT +G+ +S P++P++ KML+ +NC
Sbjct: 746 LSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNC 805
Query: 515 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHID-GDHLTLLNVYHAYKQNNEDPS 573
+ ++++ A LSV + F+ P + + A+ A+++F D DHLTL+ Y+ +K S
Sbjct: 806 LDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHS 865
Query: 574 ---WCYDNFVNHRALKSADNVRQQLVRIMARF----NLKLCSNDFNSRDYYVNIRKAMLA 626
+C+ NF++ + LK+ D++R+Q ++ N++ CS S D ++ +R + A
Sbjct: 866 GYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSK--LSHDEHL-VRAIICA 922
Query: 627 GYF---MQVAHLERTGQYLTVKDNQVVHLHPSNCLDHKP----EWVIYNEYVLTSRNFIR 679
G F V + E++ T++D QV+ L+ S+ + P W+++N+ V + F+R
Sbjct: 923 GMFPGVCSVVNKEKSITLKTMEDGQVL-LYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLR 981
Query: 680 TVTDVRGEWLI 690
T V L+
Sbjct: 982 DSTAVSDSVLL 992
Score = 415 (151.1 bits), Expect = 1.4e-91, Sum P(2) = 1.4e-91
Identities = 95/250 (38%), Positives = 137/250 (54%)
Query: 17 ETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQ 76
ET + L + + P ++ + +W P Q+ ++ RK+LP +++K+ L+
Sbjct: 256 ETVMQNSLARERILRPRSLQLKSKQ--QQWVDSPEGQK---MVGFRKTLPAYKEKDALLK 310
Query: 77 VLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXX 136
+ ANQV+++ GETG GKTTQ+PQ++LE +IE R I CTQP
Sbjct: 311 AIAANQVVVVSGETGCGKTTQLPQYILES-EIEAA-RGATCSIICTQPRRISAISVSERV 368
Query: 137 XEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHER 196
E IGE VGY +R E T L + T G+LLR + D L+ +V+DE HER
Sbjct: 369 AAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHER 428
Query: 197 TLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQ 256
+ D L +LK++L RPDLKL++MSATL AE F YF GAP M +PG +PV + +
Sbjct: 429 GMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLE 488
Query: 257 EPERDYLEAA 266
DYLE +
Sbjct: 489 ----DYLETS 494
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 454 (164.9 bits), Expect = 3.9e-90, Sum P(3) = 3.9e-90
Identities = 99/263 (37%), Positives = 155/263 (58%)
Query: 290 EEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIV 349
E+I+ + +T D+ P+ V+PLYS L Q K+F+ R +
Sbjct: 680 EDIDQVPTSSSSSVT-YDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGH-------RMCI 731
Query: 350 VSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQP 409
V+TN+AETS+TI I YV+D G AK++VYN + V+ V ISKA+A QR+GRAGRT P
Sbjct: 732 VATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGP 791
Query: 410 GKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMR 469
G C+RLY+ F++ + PEILR+ + + VL +K + ID++ +F F P L +
Sbjct: 792 GHCYRLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEK 851
Query: 470 ALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPN 529
+L++L+ LGA+D +G LT++GE+MS FPL P+ SKML+ ++ C ++++ + LS+
Sbjct: 852 SLKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQ 911
Query: 530 CFVRPREAQKAADEAKARFGHID 552
FV + A + +R D
Sbjct: 912 LFVSKQSLLYDAHDKNSRSEETD 934
Score = 451 (163.8 bits), Expect = 3.9e-90, Sum P(3) = 3.9e-90
Identities = 98/259 (37%), Positives = 148/259 (57%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
EI E R +LP+ +++ ++ + AN V+I+ G TGSGKTTQ+PQF+ E +P+
Sbjct: 390 EIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEA-GFSSPESENP 448
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
MIA TQP EE+ +V Y IRF+ + T +K++TDG+LLRE
Sbjct: 449 GMIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLREL 507
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD----------LKLVVMSATL 226
+D LL Y +++DEAHER++ TD+L GLL +++ R + LKL++MSATL
Sbjct: 508 SSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATL 567
Query: 227 EAEKFQG----YFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
F + P++K+ R +PV I + + + DYL+ A V IH P+G I
Sbjct: 568 RVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSI 627
Query: 283 LVFLTGEEEIEDACRKITK 301
LVFLTG++E+E C+ + K
Sbjct: 628 LVFLTGQQEVEQLCQMLRK 646
Score = 113 (44.8 bits), Expect = 3.9e-90, Sum P(3) = 3.9e-90
Identities = 40/163 (24%), Positives = 82/163 (50%)
Query: 544 AKARFGHIDGDH--LTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMAR 601
A +RF ID D L+LL+ AY ++ +C +N++ +AL+ N+R+Q++ ++ R
Sbjct: 957 AISRFQAIDPDAPALSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKR 1016
Query: 602 FNLKLCSNDFNSR---DYYVNI---RKAMLAGYFMQVAHLERTGQ-YLTV--KDNQVVHL 652
+ +++ F + V I R+ + + Y QVA ++ + Y+T+ ++VV
Sbjct: 1017 YMVRVEKEFFKLQLKPPTSVQIKALRQFIASAYIDQVALYDKEKRGYVTLFPSGSEVVQF 1076
Query: 653 HPSNCLDHKPEWVIYNEY--VLTSRNFIRTVTDVRGEWLIDIA 693
P + E+V+Y + R ++ +T++ E L +A
Sbjct: 1077 VPDRTYNIDSEYVVYLSLHESRSGRVYMSPLTEISPEHLARLA 1119
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
Identities = 218/646 (33%), Positives = 346/646 (53%)
Query: 63 KSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACT 122
K LPV+ QK++ L L + VI++ TGSGKTTQ+P + E E I T
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGG------AIGVT 58
Query: 123 QPXXXXXXXXXXXXXEE-MDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
QP ++ + V G VGY +RFED + T +K +TDG+LL+E DPL
Sbjct: 59 QPRRIAVLSVSEFIAKQVLHVQPGI-VGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPL 117
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLM 241
L +Y +I++DEAHER+L D + GLLK VL+ R D ++V+ SAT+ F YF P++
Sbjct: 118 LSKYSIIMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVI 177
Query: 242 KVPGRLHPVEIFY----------TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
K+ +PV + + T+E E LE + V ++ G IL+FL GE
Sbjct: 178 KIDAVAYPVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERS 237
Query: 292 IEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVS 351
I++ +++ E + ++PLY L Q+++F RK+V++
Sbjct: 238 IKNCITRLSHE-----RWFRKLFLLPLYGRLSKEEQEQVFNRAPFGK-------RKVVIA 285
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETS+TID + VID G K YNP SL +PIS+AS +QR GRAGR + G
Sbjct: 286 TNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGT 345
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
C+RLY+ F +P T EI R++L+ V+ + +LGI D HFDF+ PP ++ A
Sbjct: 346 CYRLYSRDDFEQR-EPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAE 404
Query: 472 EVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVES-PKYNCS-NEILSISAMLSVPN 529
+ L LGAL+DD +L+E+G+ M FPL P+ S+M+VE+ +Y S +++L +A LS +
Sbjct: 405 DTLRLLGALEDDRSLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARS 464
Query: 530 CFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSAD 589
+ + ++ +A F GD ++ L +Y AY Q N S+C +++ R +
Sbjct: 465 PLIFSEDQEEKTKKAHGTFSDPMGDFVSFLRIYRAYAQENNKHSFCQHFYLDERIMAEIS 524
Query: 590 NVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQV 649
N+++QL I++ L + +Y + + M+ F+ V + + LT +
Sbjct: 525 NIKEQLELIVSGMGFPLLTGG-TVEEYLICVGTGMIQ--FVCVQEHRDSYRSLTA---EC 578
Query: 650 VHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAP 694
+H+HP +C+ +P++++ E V TSR + +V+ + + IAP
Sbjct: 579 IHIHPGSCVYKDRPKFIVAGEIVRTSRMYAMSVSPLSKKIAELIAP 624
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 403 (146.9 bits), Expect = 1.0e-86, Sum P(4) = 1.0e-86
Identities = 82/227 (36%), Positives = 134/227 (59%)
Query: 63 KSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV--------------LEGVDI 108
+ LP+ + K E +++K N +II+ GETG GKTTQ+PQ + ++ +
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEKKYDNIKHKND 61
Query: 109 ETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDV-TIGEEVGYSIRFEDCSSARTVLKYL 167
E R+ K + + P +EM IG VGY+IRF++ S +T +K++
Sbjct: 62 EKKKRKEKKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFV 121
Query: 168 TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 227
TDG+L+RE M DPLL++YK ++LDE HER++ TDVL G K +L+ R +K+++MSAT +
Sbjct: 122 TDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFD 181
Query: 228 AEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 274
F +F P++ +P +LH + I+Y + DY+ + + T++QIH
Sbjct: 182 INIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 402 (146.6 bits), Expect = 1.0e-86, Sum P(4) = 1.0e-86
Identities = 96/249 (38%), Positives = 150/249 (60%)
Query: 285 FLTGEEEIEDACRKITK-EITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 343
F T + + + C K EI M D++ +K++ LYS+LP Q+ IFE
Sbjct: 373 FNTDDHILNEICFHFGKTEI--MPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNT----- 425
Query: 344 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 403
RK+++STNIAETS+TI I YVID G K K ++ L V+ ISK SA QRSGR
Sbjct: 426 --RKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGR 483
Query: 404 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 463
AGR PG+ +R+YT++ + N + P PEI RS+L L LK + I++ + F+F + P
Sbjct: 484 AGREAPGQVYRIYTKEEYEN-MNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPR 542
Query: 464 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 523
E + + ++L + A+D + NLT++G+K+ FPL+P + +L+ S ++NC +EI +I A
Sbjct: 543 KELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVA 602
Query: 524 MLSVPNCFV 532
+L+ + F+
Sbjct: 603 LLNCDSIFL 611
Score = 161 (61.7 bits), Expect = 1.0e-86, Sum P(4) = 1.0e-86
Identities = 40/161 (24%), Positives = 80/161 (49%)
Query: 536 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN--EDPSWCYDNFVNHRALKSADNVRQ 593
+ K + A+ + H DGDHLTLL++++ +++ + E +C +N+ L+ + ++
Sbjct: 696 DKNKLINVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKI 755
Query: 594 QLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVKDNQVVHL 652
QL+ IM +K+ + I + F +A T Y+ + + + +
Sbjct: 756 QLLEIMKN-KMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRI 814
Query: 653 HPSNCLDH---KPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
HPS+ L + KP ++ Y++ V T R + R VT + +WL+
Sbjct: 815 HPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLL 855
Score = 60 (26.2 bits), Expect = 1.0e-86, Sum P(4) = 1.0e-86
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 280 GDILVFLTGEEEIE 293
GDILVFL G+EEIE
Sbjct: 317 GDILVFLPGQEEIE 330
Score = 37 (18.1 bits), Expect = 9.5e-36, Sum P(3) = 9.5e-36
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 603 NLKLCSNDFNSRDYYVNI 620
N+ LCS +FN D I
Sbjct: 583 NILLCSIEFNCIDEIATI 600
Score = 37 (18.1 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 374 KQKVYNPRVRVESLLVSPIS 393
K +Y PR +E ++S +S
Sbjct: 203 KITIYYPRRNIEDYILSVVS 222
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 403 (146.9 bits), Expect = 1.0e-86, Sum P(4) = 1.0e-86
Identities = 82/227 (36%), Positives = 134/227 (59%)
Query: 63 KSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV--------------LEGVDI 108
+ LP+ + K E +++K N +II+ GETG GKTTQ+PQ + ++ +
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEKKYDNIKHKND 61
Query: 109 ETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDV-TIGEEVGYSIRFEDCSSARTVLKYL 167
E R+ K + + P +EM IG VGY+IRF++ S +T +K++
Sbjct: 62 EKKKRKEKKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFV 121
Query: 168 TDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 227
TDG+L+RE M DPLL++YK ++LDE HER++ TDVL G K +L+ R +K+++MSAT +
Sbjct: 122 TDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFD 181
Query: 228 AEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 274
F +F P++ +P +LH + I+Y + DY+ + + T++QIH
Sbjct: 182 INIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 402 (146.6 bits), Expect = 1.0e-86, Sum P(4) = 1.0e-86
Identities = 96/249 (38%), Positives = 150/249 (60%)
Query: 285 FLTGEEEIEDACRKITK-EITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXX 343
F T + + + C K EI M D++ +K++ LYS+LP Q+ IFE
Sbjct: 373 FNTDDHILNEICFHFGKTEI--MPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNT----- 425
Query: 344 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 403
RK+++STNIAETS+TI I YVID G K K ++ L V+ ISK SA QRSGR
Sbjct: 426 --RKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGR 483
Query: 404 AGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 463
AGR PG+ +R+YT++ + N + P PEI RS+L L LK + I++ + F+F + P
Sbjct: 484 AGREAPGQVYRIYTKEEYEN-MNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPR 542
Query: 464 PETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISA 523
E + + ++L + A+D + NLT++G+K+ FPL+P + +L+ S ++NC +EI +I A
Sbjct: 543 KELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVA 602
Query: 524 MLSVPNCFV 532
+L+ + F+
Sbjct: 603 LLNCDSIFL 611
Score = 161 (61.7 bits), Expect = 1.0e-86, Sum P(4) = 1.0e-86
Identities = 40/161 (24%), Positives = 80/161 (49%)
Query: 536 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN--EDPSWCYDNFVNHRALKSADNVRQ 593
+ K + A+ + H DGDHLTLL++++ +++ + E +C +N+ L+ + ++
Sbjct: 696 DKNKLINVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKI 755
Query: 594 QLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVKDNQVVHL 652
QL+ IM +K+ + I + F +A T Y+ + + + +
Sbjct: 756 QLLEIMKN-KMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRI 814
Query: 653 HPSNCLDH---KPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
HPS+ L + KP ++ Y++ V T R + R VT + +WL+
Sbjct: 815 HPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLL 855
Score = 60 (26.2 bits), Expect = 1.0e-86, Sum P(4) = 1.0e-86
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 280 GDILVFLTGEEEIE 293
GDILVFL G+EEIE
Sbjct: 317 GDILVFLPGQEEIE 330
Score = 37 (18.1 bits), Expect = 9.5e-36, Sum P(3) = 9.5e-36
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 603 NLKLCSNDFNSRDYYVNI 620
N+ LCS +FN D I
Sbjct: 583 NILLCSIEFNCIDEIATI 600
Score = 37 (18.1 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 374 KQKVYNPRVRVESLLVSPIS 393
K +Y PR +E ++S +S
Sbjct: 203 KITIYYPRRNIEDYILSVVS 222
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 416 (151.5 bits), Expect = 1.6e-86, Sum P(5) = 1.6e-86
Identities = 98/246 (39%), Positives = 144/246 (58%)
Query: 311 GPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDP 370
G ++V+PLY+ L PA Q ++FE R +VV+TN+AETSLTI GI YV+D
Sbjct: 645 GKLRVLPLYAMLSPAAQLRVFEEVEKEE-------RLVVVATNVAETSLTIPGIKYVVDT 697
Query: 371 GFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTY 430
G K K Y+ + +ES V IS+ASA QR+GRAGRT PG C+RLY+ F+N + +
Sbjct: 698 GRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSL 757
Query: 431 PEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMG 490
PEI++ + +L +K + I + +F F PP P + A L L ALD +G LT +G
Sbjct: 758 PEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLG 817
Query: 491 EKMSEFPLDPQMSKMLV-------ESPKYNCSNEILSIS----AMLSVPNCFVRPREAQK 539
+ MS +P+ P+ S+ML+ E+ Y+ +N IL + A LS+PN + E +K
Sbjct: 818 KAMSHYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEK 877
Query: 540 AADEAK 545
+E+K
Sbjct: 878 K-NESK 882
Score = 319 (117.4 bits), Expect = 1.6e-86, Sum P(5) = 1.6e-86
Identities = 63/160 (39%), Positives = 95/160 (59%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
E+ E RK LP+ ++E ++ + + +I+ G+TG GKTTQ+PQF+ E R
Sbjct: 233 EVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRS 292
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
+I TQP E+ V +G+EVG+ +R++ + +K++TDG+LLRE
Sbjct: 293 GIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREI 352
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD 216
D LL RY VI+LDEAHER+L TD+L G+L V+K R +
Sbjct: 353 QNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQE 392
Score = 161 (61.7 bits), Expect = 1.6e-86, Sum P(5) = 1.6e-86
Identities = 39/90 (43%), Positives = 56/90 (62%)
Query: 217 LKLVVMSATLEAEKF-QG--YFYGAP-LMKVPGRLHPVEIFYTQEPER-DYLEAAIRTVV 271
LKL++MSATL E F G F P L++VP R +PV I ++++ E DY+ A + V+
Sbjct: 416 LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVM 475
Query: 272 QIHMCEPSGDILVFLTGEEEIEDACRKITK 301
IH P G ILVF+TG+ E++ C K+ K
Sbjct: 476 SIHKKLPQGGILVFVTGQREVDYLCEKLRK 505
Score = 107 (42.7 bits), Expect = 1.6e-86, Sum P(5) = 1.6e-86
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 622 KAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHP-SNCLDHKPEWVIYNEYVLTSRNFIRT 680
+A+ AG+ +VA R +Y + V LH S+ ++ PE ++Y+E +LT+R ++
Sbjct: 1010 EAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRPYMHG 1069
Query: 681 VTDVRGEWLI 690
T VR EWL+
Sbjct: 1070 ATRVRPEWLV 1079
Score = 69 (29.3 bits), Expect = 1.6e-86, Sum P(5) = 1.6e-86
Identities = 15/71 (21%), Positives = 36/71 (50%)
Query: 533 RPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVR 592
R ++ ++ A+ RF + D LT+ H+++ + +C N ++ + + ++
Sbjct: 895 RKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLK 954
Query: 593 QQLVRIMARFN 603
QL+R++ FN
Sbjct: 955 DQLLRLV--FN 963
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 166/359 (46%), Positives = 242/359 (67%)
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK +V+TNIAETSLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAG
Sbjct: 111 RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAG 170
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT PG+CFRLYT+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP +
Sbjct: 171 RTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 230
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +ML
Sbjct: 231 NMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSML 290
Query: 526 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 585
SVP F RP+ ++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A+
Sbjct: 291 SVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAM 350
Query: 586 KSADNVRQQLVRIMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 643
+ VR QL IM R +L C D++ +RK + A YF Q A L+ G+Y+
Sbjct: 351 RKVREVRAQLKDIMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVN 404
Query: 644 VKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
++ HLHP++ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 405 IRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 463
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 518 (187.4 bits), Expect = 4.0e-86, Sum P(2) = 4.0e-86
Identities = 138/433 (31%), Positives = 237/433 (54%)
Query: 274 HMCEPSGD--ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIF 331
++CE G IL+FLTG ++I K+ +I + V ++ + ++ Q+ IF
Sbjct: 491 NICENEGPGGILIFLTGWDDISSLKEKL--QIHPIFGNPDLVMLLACHGSMETFEQRLIF 548
Query: 332 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 391
E RKIV++TNIAETS+TI+ + +VID G AK+ Y+ LL S
Sbjct: 549 EEPASGV-------RKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSW 601
Query: 392 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 451
ISK SA QR GRAGR +PG+C+ LY + ++ + Q PEILR+ L + L +K L +
Sbjct: 602 ISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQL-PEILRTPLHSLCLQIKSLNLG 660
Query: 452 DLVHFDFMDPPAPETL--MRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVES 509
+ F +PE L +A+ L +GALD++ +LT +G +S+ P++P++ KML+
Sbjct: 661 SISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILG 720
Query: 510 PKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNN 569
C + IL+++A LSV + F+ P++ + A+ AK++F DHL L+ Y +K+
Sbjct: 721 AILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAE 780
Query: 570 EDPS---WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDF--NSRDYYVNIRKAM 624
E+ + +C+ NF++ ++L++ D++R++ ++ L + N NS N+ +A+
Sbjct: 781 EESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGL-IDGNPSICNSEGNDANLTRAV 839
Query: 625 LA-GYF---MQVAHLERTGQYLTVKDNQVV-HLHPSNCLDHK-P-EWVIYNEYVLTSRNF 677
+ G + V H ER+ T++D QV+ + + N + K P W+++NE + + F
Sbjct: 840 ICYGMYPGICSVVHNERSFSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKIKVNSVF 899
Query: 678 IRTVTDVRGEWLI 690
+R T LI
Sbjct: 900 LRDSTACSDSTLI 912
Score = 383 (139.9 bits), Expect = 4.0e-86, Sum P(2) = 4.0e-86
Identities = 84/212 (39%), Positives = 118/212 (55%)
Query: 46 WNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG 105
W QR +L+ R SLP ++Q+ L + NQVI++ GETG GKTTQIPQF+LE
Sbjct: 204 WQASVEGQR---MLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILES 260
Query: 106 VDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLK 165
+IE +R I CTQP E +GE VGY +R E T L
Sbjct: 261 -EIEA-NRGAFSSIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLL 318
Query: 166 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
+ T G+LLR + D L +++DE HER + D L +LK++L R +LKL++MSAT
Sbjct: 319 FCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSAT 378
Query: 226 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
L+AE F YF GA ++ +PG +PV + ++
Sbjct: 379 LDAELFSSYFGGAGVIYIPGFTYPVRSHFLED 410
Score = 38 (18.4 bits), Expect = 6.5e-31, Sum P(2) = 6.5e-31
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 239 PLMKVPGRLHPVEIFYTQEPERDYLEAA 266
P++ V L + F T + ++D EAA
Sbjct: 728 PILTVAAGLSVRDPFLTPQDKKDLAEAA 755
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 204/602 (33%), Positives = 333/602 (55%)
Query: 26 KTNGVGPGAMMNNNNSLIN--RWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQV 83
+++G G + + +L++ +N K + ++ ++KSLP++Q +++ +++++ + V
Sbjct: 121 ESSGPGRQEITDGRLALLHFLDFNQKQSFSKLSKLRREQKSLPIFQYRDKIVELVRTHPV 180
Query: 84 IILVGETGSGKTTQIPQFVL-EGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDV 142
+++ G+TG GK+TQ+PQ++L G++ IACTQP E
Sbjct: 181 VVVAGDTGCGKSTQVPQYLLASGIN----------NIACTQPRRIACISLAKRVSFESLN 230
Query: 143 TIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDV 202
G +VGY IRFE + T L +LT+G+LLR+ D L +Y+V+++DE HER L D
Sbjct: 231 QYGSKVGYQIRFETSRTLATKLLFLTEGLLLRQIQQDASLGQYQVLIVDEVHERHLHCDF 290
Query: 203 LFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQ-EPE-- 259
L G+L+ +L RPDL+LV+MSAT+ + F YF AP+++VPGRL P+++ Y PE
Sbjct: 291 LLGVLRSLLSLRPDLRLVLMSATINIKLFSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQ 350
Query: 260 ---------RDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEI---EDACRKITKEITNMG 307
R YL ++ + Q + E GD+L+FL+G EI ++AC+ T+
Sbjct: 351 VSRSEKLDPRPYLRV-LQGIDQRYPQEERGDLLLFLSGVAEISTIQEACQTYA---THTQ 406
Query: 308 DQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYV 367
+ V+PL+STL A Q K+F+ RK ++STNIAETS+TIDG+ +V
Sbjct: 407 RWI----VLPLHSTLSLAQQDKVFDIAPPGV-------RKCIISTNIAETSVTIDGVRFV 455
Query: 368 IDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQP 427
+D G K+ ++P+ +++ L IS+AS+ QR GRAGRT PG C+RLY+E ++ P
Sbjct: 456 VDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRTGPGVCYRLYSESDYDA-FAP 514
Query: 428 QTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLT 487
PEI R L + +L +K +G+ D F F+DPP ++ A+ L GALD+ G LT
Sbjct: 515 YPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDPPPASSIQTAVTYLREQGALDEHGELT 574
Query: 488 EMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKAR 547
+G +++ P+D + KMLV +N +L+++A LSV + F+R + A+
Sbjct: 575 SIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALSVQSPFLRSAQHNPDCSTARQP 634
Query: 548 FGHIDGDHLTLLNVYHAYKQNNEDPS-----WCYDNFVNHRALKSADNVRQQLVRIMARF 602
GD TL+N ++A+ Q D WC + + L N+R+Q ++
Sbjct: 635 LNSNHGDPFTLMNTFNAWVQVKADRGSGSRKWCRRRGLEEQRLYEMVNLRRQFKELLRSH 694
Query: 603 NL 604
L
Sbjct: 695 GL 696
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 441 (160.3 bits), Expect = 3.7e-85, Sum P(5) = 3.7e-85
Identities = 105/257 (40%), Positives = 151/257 (58%)
Query: 291 EIEDACRKITKEITNMGDQ--VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKI 348
E ED ++I D+ GP+ V+PLYSTLP + Q ++F+ R +
Sbjct: 822 EDEDEFEIGKEDIITEDDEKPAGPLFVLPLYSTLPTSKQMRVFQTPPLGS-------RLV 874
Query: 349 VVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQ 408
VV+TN+AETSLTI I YV+D G KQ+ YN + S V SKASA QR+GRAGRT
Sbjct: 875 VVATNLAETSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTG 934
Query: 409 PGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLM 468
PG C+R+Y+ FN+ Q + PEIL + +L +K +GI + F F PP +L
Sbjct: 935 PGHCYRIYSSAVFNDHFQQFSKPEILMIPIDGMILQMKSMGIQKITGFPFPTPPDESSLK 994
Query: 469 RALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV 527
AL L LGAL+ ++TE+G KMS+FP+ P+ SKML+ ++NC I++I ++L+V
Sbjct: 995 LALRTLINLGALEVKTFSITELGMKMSQFPVSPRHSKMLLLGQEHNCLPYIIAIVSILTV 1054
Query: 528 PNCFVRPR-EAQKAADE 543
+ F++ EA + DE
Sbjct: 1055 KDPFLKEAYEANQNNDE 1071
Score = 314 (115.6 bits), Expect = 3.7e-85, Sum P(5) = 3.7e-85
Identities = 68/168 (40%), Positives = 98/168 (58%)
Query: 53 QRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPD 112
+R EI R +LP+ ++ ++ +K N V+I+ GETGSGKTTQ+PQF+ E
Sbjct: 393 ERKPEIDAVRDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRES 452
Query: 113 RRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFED-CSSARTVLKYLTDGM 171
+I TQP EE++V G+EVGY IR++ S+ +K++TDG+
Sbjct: 453 GDFPGIIGVTQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGI 512
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKL 219
L+RE TD LL +Y I++DEAHER L TD+L GLL ++ R L L
Sbjct: 513 LMREVQTDFLLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYL 560
Score = 161 (61.7 bits), Expect = 3.7e-85, Sum P(5) = 3.7e-85
Identities = 38/90 (42%), Positives = 55/90 (61%)
Query: 217 LKLVVMSATLEAEKFQG----YFYGAPLMKVPGRLHPVEIFYTQEPER-DYLEAAIRTVV 271
LKLVVMSATL E F + P++ +P R PV I + ++ E +Y++ + VV
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKVV 639
Query: 272 QIHMCEPSGDILVFLTGEEEIEDACRKITK 301
+IH PSG ILVF+TG++EIE C K+ +
Sbjct: 640 KIHKNLPSGGILVFVTGKQEIEYLCSKLRR 669
Score = 71 (30.1 bits), Expect = 3.7e-85, Sum P(5) = 3.7e-85
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 533 RPREAQKAADEAKARFGHIDGDHLTLLNVYHAYK-QNNEDPS----WCYDNFVNHRALKS 587
R + Q+ + + ++ H + D L++L V AY Q + P +C NF+N +++
Sbjct: 1099 RQKHLQRLRNSMR-KWLHKESDLLSILKVVGAYDYQIRKSPKDIDHFCSQNFLNTKSMSE 1157
Query: 588 ADNVRQQLVRIMARFN 603
+R QL I+ N
Sbjct: 1158 IHKLRHQLTEIVNSIN 1173
Score = 70 (29.7 bits), Expect = 3.7e-85, Sum P(5) = 3.7e-85
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 652 LHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWL 689
+HP++ L + + E+VIY + + TSR +++ VT++ WL
Sbjct: 1260 IHPTSNLGGVNTQAEYVIYCDIIETSRPYMKLVTEINPSWL 1300
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 496 (179.7 bits), Expect = 1.6e-83, Sum P(2) = 1.6e-83
Identities = 129/394 (32%), Positives = 210/394 (53%)
Query: 274 HMCE--PSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP-VKVVPLYSTLPPAMQQKI 330
++CE P G ILVFL G ++I + K T+ G + + V PL+S + QQ +
Sbjct: 415 YICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAV 474
Query: 331 FEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVS 390
F RK+++ST IAETS+TID +VYVI+ G K Y+ ++SL
Sbjct: 475 FRRPPAGQ-------RKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEV 527
Query: 391 PISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGI 450
++KA+ QR GRAGR +PG C+ L++ ++ + + PEILRS L + +L+LK L I
Sbjct: 528 WVTKANTQQRRGRAGRVRPGICYNLFS-RAREDRMDDIPTPEILRSKLESIILSLKLLHI 586
Query: 451 DDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVE 508
DD F ++ P PE + +E+L + ALD G LT +G +++ P+DPQM KM++
Sbjct: 587 DDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILM 646
Query: 509 SPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFG-HIDGDHLTLLNVYHAYKQ 567
S + C + I S +A LS + F P + DE K R ++ DHL + N AY+
Sbjct: 647 SALFCCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRD 706
Query: 568 N---NEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSN--DF--NSRDYYVNI 620
+ + + +CY NF++ L+ + ++ Q ++ + SN D N + +
Sbjct: 707 SRYSHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIPL 766
Query: 621 RKAML-AGYFMQVAHLERTGQYLTVKDNQVVHLH 653
+A++ AG + +AHL ++ Q +K N+V +H
Sbjct: 767 LRAIIGAGLYPNMAHLRKSRQ---IK-NRVRAIH 796
Score = 394 (143.8 bits), Expect = 1.6e-83, Sum P(2) = 1.6e-83
Identities = 78/200 (39%), Positives = 119/200 (59%)
Query: 59 LEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMM 118
LE RK LP + ++ +Q ++ NQVI++VG TG GKTTQ+PQ +L+ D +
Sbjct: 147 LEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLD--DAISRGCASSCR 204
Query: 119 IACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSA-RTVLKYLTDGMLLREAM 177
I CTQP E ++G VGY IR E + R + Y T G+LL++
Sbjct: 205 IICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQ 264
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+DPL+ V++LDE HER++ TD+L GLLK +L +RPDLK+++MSAT+ + F YF
Sbjct: 265 SDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNN 324
Query: 238 APLMKVPGRLHPVEIFYTQE 257
P+ ++ G + PV++ Y ++
Sbjct: 325 CPMFRIEGVMFPVKMLYLED 344
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 214/617 (34%), Positives = 317/617 (51%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
R ++ +R +LP+ Q LQ+LK +QV+++ G+TG GK+TQ+PQ++L
Sbjct: 151 RLAKLQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAAGCSH---- 206
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLL 173
+ACTQP E G +VGY IRFE SA T + +LT G+LL
Sbjct: 207 -----VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLL 261
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 233
R+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+V+MSAT+ F
Sbjct: 262 RQMQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSS 321
Query: 234 YFYGAPLMKVPGRLHPVEIFYT-QEPE-----------RDYLEAAIRTVVQIHMCEPSGD 281
YF AP+++VPGRL P+ + Y QE E R +L + + + E GD
Sbjct: 322 YFGNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRV-LEAIDNKYPPEERGD 380
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
+LVFL+G EI ++ V V+PL+S L A Q K+F+
Sbjct: 381 LLVFLSGMAEISAVLEPAQAYASHTQRWV----VLPLHSALSVADQDKVFDVAPPGV--- 433
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+ASA QR
Sbjct: 434 ----RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRK 489
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT PG CFRLY E ++ P PEI R L VL +K + + D F F++P
Sbjct: 490 GRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEP 548
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
P P +L A+ L GALD LT +G +++ P+D + KML+ ++ + +L+I
Sbjct: 549 PPPTSLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTI 608
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ-----NNEDPSWCY 576
+A LSV F R ++ + GD TLLNV++ + Q WC
Sbjct: 609 AAALSVQTPFTRSAQSNPECAATRRPLESDQGDPFTLLNVFNTWVQVKSERGRNSRKWCR 668
Query: 577 DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI--RKAMLAGYFMQVAH 634
+ L N+R+Q ++ L + D Y + R+ A Y ++ H
Sbjct: 669 HRGIEEHRLYEMANLRRQFKELLEDHGLLAGAQAPQPGDSYSRLQRRRERQALYELKRRH 728
Query: 635 LERTGQ---YLTVKDNQ 648
E G+ L V+D+Q
Sbjct: 729 EEGVGRKRKVLRVQDDQ 745
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 212/605 (35%), Positives = 316/605 (52%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
R ++ +R +LP+ Q LQ LK +QV+++ G+TG GK+TQ+PQ++L
Sbjct: 151 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---- 206
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLL 173
+ACTQP E G +VGY IRFE SA T + +LT G+LL
Sbjct: 207 -----VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLL 261
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 233
R+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT+ F
Sbjct: 262 RQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSS 321
Query: 234 YFYGAPLMKVPGRLHPVEIFYT-QEPE-----RDYLEAA--IRTVVQI-HMCEPS--GDI 282
YF AP+++VPGRL P+ + Y QE E + L+ +R + I H P GD+
Sbjct: 322 YFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDL 381
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 342
LVFL+G EI ++ V V+PL+S L A Q K+F+
Sbjct: 382 LVFLSGMAEISAVLEAAQTYASHTQRWV----VLPLHSALSVADQDKVFDVAPPGV---- 433
Query: 343 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+ASA QR G
Sbjct: 434 ---RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKG 490
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
RAGRT PG CFRLY E ++ P PEI R L + VL +K + + D F F++PP
Sbjct: 491 RAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPP 549
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
P +L A+ L GALD LT +G +++ P+D + KML+ ++ +L+I+
Sbjct: 550 PPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIA 609
Query: 523 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-----WCYD 577
A LSV + F R ++ A+ GD TL NV++A+ Q + S WC
Sbjct: 610 AALSVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRR 669
Query: 578 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI--RKAMLAGYFMQVAHL 635
+ L N+R+Q ++ L + D Y + R+ A + ++ H
Sbjct: 670 RGIEEHRLYEMANLRRQFKELLEDHGLLAGAQAAQVGDSYSRLQQRRERRALHQLKRQHE 729
Query: 636 ERTGQ 640
E G+
Sbjct: 730 EGAGR 734
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 495 (179.3 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
Identities = 143/438 (32%), Positives = 233/438 (53%)
Query: 271 VQIHMC--EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQ 328
V H+C E G +LVFLTG ++I +I K +GD V ++ + ++ A Q+
Sbjct: 529 VLCHICRKERPGAVLVFLTGWDDIRSLSDQI-KAHPLLGDP-NRVLLLMCHGSMATAEQR 586
Query: 329 KIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLL 388
IFE RKIV++TN+AE S+TI+ +V+V+D G AK+ Y+ LL
Sbjct: 587 LIFERAPPNI-------RKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLL 639
Query: 389 VSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKL 448
S IS+ASA QR GRAGR PG+C+ LY + ++ + Q PE+LR+ L + L +K L
Sbjct: 640 PSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQL-PELLRTPLNSLCLQIKSL 698
Query: 449 GIDDLVHFDFMDPPAPETL--MRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKML 506
++ + F APE+L A+ L +GALD+ NLT++G+ +S P+DP++ KML
Sbjct: 699 QVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKML 758
Query: 507 VESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHID-GDHLTLLNVYHAY 565
+ + C + IL+I + LSV + F+ P++ + A AK RF D DH+ L+ + +
Sbjct: 759 IMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGW 818
Query: 566 KQNNEDPS---WCYDNFVNHRALKSADNVRQQLVRIMARFNL---KLCSNDFNSRDYYVN 619
K + S +C+ NF++ + L++ ++R+Q I+ L L N+ S + +
Sbjct: 819 KDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSHNQSL- 877
Query: 620 IRKAMLAGYFMQVA---HLERTGQYLTVKDNQVVHLHPSNCLDHKPE----WVIYNEYVL 672
+R + +G F +A H E + + T+ D QV L+ ++ P W+++ E V
Sbjct: 878 VRAVICSGLFPGIASVVHRETSMSFKTMDDGQV-SLYANSVNSRFPTIPYPWLVFGEKVK 936
Query: 673 TSRNFIRTVTDVRGEWLI 690
+ IR T V LI
Sbjct: 937 VNAVLIRDSTGVPDSSLI 954
Score = 399 (145.5 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
Identities = 87/212 (41%), Positives = 121/212 (57%)
Query: 46 WNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG 105
W P + +LE RK+LP ++ KE LQ + NQVI++ GETG GKTTQ+PQ++LE
Sbjct: 244 WQESPEGRT---MLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILES 300
Query: 106 VDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLK 165
+IE+ R I CTQP E +GE VG+ +R E T L
Sbjct: 301 -EIES-GRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLL 358
Query: 166 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
+ T G+LLR ++D L + +DE HER + D L +LKE+L RPDL+LV+MSAT
Sbjct: 359 FCTSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSAT 418
Query: 226 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
L AE F Y+ GAP + +PG HPV+ + ++
Sbjct: 419 LNAELFSNYYGGAPTIHIPGFTHPVKAHFLED 450
Score = 40 (19.1 bits), Expect = 7.0e-33, Sum P(2) = 7.0e-33
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 450 IDDLVHFDFMDPPAPETLMRALEVLNYL 477
+D + F FMDP E+ ++ E L+ L
Sbjct: 972 LDGYIDF-FMDPNLAESYVKLKEELDKL 998
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 436 (158.5 bits), Expect = 8.2e-83, Sum P(4) = 8.2e-83
Identities = 101/261 (38%), Positives = 155/261 (59%)
Query: 288 GEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRK 347
G+E E+ KI +E G + V+PLYS LP Q ++FE R
Sbjct: 653 GDENEEEEF-KIEEEEAGTGPS--RMHVLPLYSLLPTKEQLRVFEPPPDGS-------RL 702
Query: 348 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRT 407
+V++TN+AETSLTI GI YV D G +K++ Y+ V+S V ISKASA+QR GRAGRT
Sbjct: 703 VVLATNVAETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRT 762
Query: 408 QPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETL 467
PG C+RLY+ + DL PE+LR++L VL LK + + +V+F F PP ++L
Sbjct: 763 GPGHCWRLYSSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSL 822
Query: 468 MRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV 527
+++ ++L Y+ A+ ++G +T++G MS FPL P+ S++L+ +++C + +++ A LS
Sbjct: 823 VKSEKLLKYISAVSEEGRVTQVGYTMSIFPLSPRFSRILLLGHQHDCLHYTVTLVAALSA 882
Query: 528 PNCFVRPREA--QKAADEAKA 546
F+ +A Q AA E A
Sbjct: 883 AEIFIPENQAIPQLAAKEDDA 903
Score = 428 (155.7 bits), Expect = 8.2e-83, Sum P(4) = 8.2e-83
Identities = 97/257 (37%), Positives = 145/257 (56%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
EI R +LPV +++ ++ + N ++++ G TGSGKTTQIPQF+ E +PD
Sbjct: 349 EIQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEA-GYGSPDSPTP 407
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
MI TQP EE+ ++VGY IRFE + T +K++TDG+LLRE
Sbjct: 408 GMIGITQPRRVAAVSMSKRVAEELG-DHSQKVGYQIRFEGTVNKDTAVKFMTDGVLLREV 466
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD----------LKLVVMSATL 226
D L +Y IV+DEAHER++ TD+L G+L ++K R + LKLV+MSATL
Sbjct: 467 AQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSATL 526
Query: 227 EAEKF---QGYFYGAP-LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
E + F P +++V GR +PV + + ++ DY+E A R + + H P G +
Sbjct: 527 RIEDLTENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISRGHKKLPPGGM 586
Query: 283 LVFLTGEEEIEDACRKI 299
LVFLTG+ EI +++
Sbjct: 587 LVFLTGQNEITQLSKRL 603
Score = 77 (32.2 bits), Expect = 8.2e-83, Sum P(4) = 8.2e-83
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 554 DHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSN-DFN 612
D + +L V + + WC +FV + LK A +RQQ+V+++ + N+ +N +F
Sbjct: 938 DAIKMLQVLGEFAHEPTE-KWCESHFVRFKVLKEAQKLRQQIVQLL-KTNIPSFANINFQ 995
Query: 613 SR-----DYYVNIRKAMLA-GYFMQVA 633
+ + V K M+A G+ +VA
Sbjct: 996 DKLDAPTEKQVKALKQMVAAGFIDRVA 1022
Score = 51 (23.0 bits), Expect = 8.2e-83, Sum P(4) = 8.2e-83
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 646 DNQVVHLHPSNCLDHK-----PEWVIYN 668
+ ++V++HPS+ L H P+++IYN
Sbjct: 1062 EEKLVYIHPSSPLAHLSTSECPDYIIYN 1089
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 210/605 (34%), Positives = 315/605 (52%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
R ++ +R +LP+ Q LQ LK +QV+++ G+TG GK+TQ+PQ++L
Sbjct: 150 RLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---- 205
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLL 173
+ACTQP E G +VGY IRFE +A T + +LT G+LL
Sbjct: 206 -----VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLL 260
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 233
R+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT+ F
Sbjct: 261 RQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSS 320
Query: 234 YFYGAPLMKVPGRLHPVEIFYT-QEPE-----RDYLEAA--IRTVVQI---HMCEPSGDI 282
YF AP+++VPGRL P+ + Y QE E + L+ +R + I + E GD+
Sbjct: 321 YFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERGDL 380
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 342
LVFL+G EI + + + V+PL+S L A Q K+F+
Sbjct: 381 LVFLSGMAEISS----VLEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGV---- 432
Query: 343 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ ++ L IS+ASA QR G
Sbjct: 433 ---RKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKG 489
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
RAGRT PG CFRLY E ++ P PEI R L VL +K + + D F F++PP
Sbjct: 490 RAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPP 548
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
P +L A+ L GALD LT +G +++ P+D + KML+ ++ + +L+I+
Sbjct: 549 PPASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIA 608
Query: 523 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-----WCYD 577
A LSV + F R ++ A+ GD TL NV++A+ Q + S WC
Sbjct: 609 AALSVQSPFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRH 668
Query: 578 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI--RKAMLAGYFMQVAHL 635
+ L N+R+Q ++ L + D Y + R+ A Y ++ H
Sbjct: 669 RGIEEHRLYEMANLRRQFKELLEDHGLLARAQAPTPGDSYHRLQQRRERRALYRLKRQHE 728
Query: 636 ERTGQ 640
E G+
Sbjct: 729 EGGGR 733
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 216/587 (36%), Positives = 307/587 (52%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
R + +R +LP+ Q ++ LQ LK +QV+++ G+TG GK+TQ+PQ++L
Sbjct: 151 RLARLQRERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---- 206
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLL 173
+ACTQP E G +VGY IRFE SA T + +LT G+LL
Sbjct: 207 -----VACTQPRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLL 261
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 233
R +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT+ F
Sbjct: 262 RHVQREPTLPQYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSA 321
Query: 234 YFYGAPLMKVPGRLHPVEIFYTQ---EPERDYLEAA-----IRTVVQI---HMCEPSGDI 282
YF AP+++VPGRL P+ + Y EP LE IR + I + E GD+
Sbjct: 322 YFGQAPVVQVPGRLFPITVVYQPQEAEPTASTLEKLDPRPFIRVLEAIDSKYPPEERGDL 381
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 342
LVFL+G EI G V V+PL+STL A Q K+F+
Sbjct: 382 LVFLSGLAEIGAVLEAAQAHARRSGRWV----VLPLHSTLSVAAQDKVFDVAPPGV---- 433
Query: 343 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+ASA QR G
Sbjct: 434 ---RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKG 490
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
RAGRT PG CFRLY E ++ P PEI R L VL +K + + D F F++PP
Sbjct: 491 RAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPP 549
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
+L A+ L GALD LT +G +++ P+D + KMLV + + +L+I+
Sbjct: 550 PAASLETAILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIA 609
Query: 523 AMLSVPNCFVRP-REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-----WCY 576
A LSV + F R R K A A H GD TL NV++ + Q D S WC
Sbjct: 610 AALSVQSPFTRSTRSNPKCAWRA-LESDH--GDPFTLFNVFNNWVQVKSDRSTKSRRWCR 666
Query: 577 -DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRK 622
+ HR + A N+R+Q ++ L + D Y +R+
Sbjct: 667 REGIEEHRLYEMA-NLRRQFKELLEDHGLLAGTQAPKPGDSYSRLRQ 712
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 828 (296.5 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 210/605 (34%), Positives = 315/605 (52%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
R ++ +R +LP+ Q LQ LK +QV+++ G+TG GK+TQ+PQ++L
Sbjct: 155 RLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---- 210
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLL 173
+ACTQP E G +VGY IRFE +A T + +LT G+LL
Sbjct: 211 -----VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLL 265
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 233
R+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT+ F
Sbjct: 266 RQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSS 325
Query: 234 YFYGAPLMKVPGRLHPVEIFYT-QEPE-----RDYLEAA--IRTVVQI---HMCEPSGDI 282
YF AP+++VPGRL P+ + Y QE E + L+ +R + I + E GD+
Sbjct: 326 YFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERGDL 385
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 342
LVFL+G EI + + + V+PL+S L A Q K+F+
Sbjct: 386 LVFLSGMAEISS----VLEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGV---- 437
Query: 343 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ ++ L IS+ASA QR G
Sbjct: 438 ---RKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKG 494
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
RAGRT PG CFRLY E ++ P PEI R L VL +K + + D F F++PP
Sbjct: 495 RAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPP 553
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
P +L A+ L GALD LT +G +++ P+D + KML+ ++ + +L+I+
Sbjct: 554 PPASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIA 613
Query: 523 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-----WCYD 577
A LSV + F R ++ A+ GD TL NV++A+ Q + S WC
Sbjct: 614 AALSVQSPFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRH 673
Query: 578 NFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI--RKAMLAGYFMQVAHL 635
+ L N+R+Q ++ L + D Y + R+ A Y ++ H
Sbjct: 674 RGIEEHRLYEMANLRRQFKELLEDHGLLARAQAPTPGDSYHRLQQRRERRALYRLKRQHE 733
Query: 636 ERTGQ 640
E G+
Sbjct: 734 EGGGR 738
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 813 (291.2 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 204/564 (36%), Positives = 305/564 (54%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
R ++ +R +LP+ Q LQ LK +QV+++ G+TG GK+TQ+PQ++L
Sbjct: 153 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---- 208
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLL 173
+ACTQP E G +VGY IRFE SA T + +LT G+LL
Sbjct: 209 -----VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLL 263
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 233
R+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT+ F
Sbjct: 264 RQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSS 323
Query: 234 YFYGAPLMKVPGRLHPVEIFYT-QEPER-----DYLEAA--IRTVVQI---HMCEPSGDI 282
YF AP+++VPGRL P+ + Y QE ++ + L+ +R + I + E GD+
Sbjct: 324 YFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDL 383
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXX 342
LVFL+G EI + ++ + V+PL+S L + Q K+F+
Sbjct: 384 LVFLSGMAEITTVL-DAAQAYASLTQRW---VVLPLHSALSVSDQDKVFDVAPAGV---- 435
Query: 343 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+ASA QR G
Sbjct: 436 ---RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKG 492
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
RAGRT PG C+RLY E ++ P PEI R L VL +K + + D F F++PP
Sbjct: 493 RAGRTGPGVCYRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPP 551
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
P ++ A+ L GALD LT +G +++ P+D + KML+ ++ + +L+I+
Sbjct: 552 PPASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIA 611
Query: 523 AMLSVPNCFVRPREAQKAADEAKAR--FGHIDGDHLTLLNVYHAYKQNNEDPS-----WC 575
A LSV + F R AQ D A AR GD TL NV++A+ Q + S WC
Sbjct: 612 AALSVQSPFTR--SAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQVKSERSGNSRKWC 669
Query: 576 YDNFVNHRALKSADNVRQQLVRIM 599
V L N+R+Q ++
Sbjct: 670 RRRGVEEHRLYEMANLRRQFKELL 693
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 472 (171.2 bits), Expect = 2.0e-80, Sum P(3) = 2.0e-80
Identities = 119/303 (39%), Positives = 172/303 (56%)
Query: 252 IFYTQEPERDYLEAAIRTVVQIHMCEPSGDILV---FLTGEEEIEDACRKITKEITNMGD 308
I Y + + E + V + SGD + + GEE E+ + I +
Sbjct: 708 IQYDENIDVKLSENVQQEVEDVDFSVQSGDAGILDDYEEGEENEEEE-EGFEESIDSKES 766
Query: 309 QVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVI 368
+VGP+ V+PLYS LP Q K+FE R +V+TN+AETSLTI GI YV+
Sbjct: 767 EVGPLYVLPLYSLLPTKQQMKVFEDPPPGS-------RICIVATNVAETSLTIPGIRYVV 819
Query: 369 DPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQ 428
D G +K++ YN V+S V +SKASA+QR+GRAGRT PG C+RLY+ F D PQ
Sbjct: 820 DCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVFE-DFFPQ 878
Query: 429 -TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD-DDGNL 486
+ PEILR + VL++K +GID + +F F PP +L +A E+L LGALD + +
Sbjct: 879 FSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVILGALDKEQKQI 938
Query: 487 TEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE-AQKAADEAK 545
T++G+KMS FPL P+ +K+L+ + C + I++I + LSV + F+ E DEA+
Sbjct: 939 TDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGENELVGNMNDEAR 998
Query: 546 ARF 548
F
Sbjct: 999 REF 1001
Score = 407 (148.3 bits), Expect = 2.0e-80, Sum P(3) = 2.0e-80
Identities = 101/265 (38%), Positives = 141/265 (53%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I ++R LPV+ ++ ++ + + IIL GETGSGKTTQ+PQF+ E
Sbjct: 436 IQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPG 495
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFE-----DCSSARTVLKYLTDGML 172
MI TQP E+ G VGY IRF+ + T LK++TDG+L
Sbjct: 496 MIGVTQPRRVAAVSMAERVGSELG-DHGHRVGYQIRFDTTIKNEGKENGTALKFMTDGVL 554
Query: 173 LREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNR-------PDL----KLVV 221
LRE MTD LL +Y I++DEAHER + TD+L G+L V+K R P L KL++
Sbjct: 555 LREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLII 614
Query: 222 MSATLEAEKFQG----YFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCE 277
MSATL F + P++ V R +PV I + ++ DYLE A + +IH
Sbjct: 615 MSATLRVSDFSENPALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKKTCKIHRKL 674
Query: 278 PSGDILVFLTGEEEIEDACRKITKE 302
P G IL+FLTG+ EI +K+ +E
Sbjct: 675 PEGGILIFLTGQNEITTLVKKLRQE 699
Score = 42 (19.8 bits), Expect = 2.0e-80, Sum P(3) = 2.0e-80
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 642 LTVKDNQVVHLHPSNCLDHKPE----WVIYNEYVLTSRNFIRTVTD-VRGEWLIDIA 693
+ ++D V+LHP++ + + +++Y + T N T VR L+DI+
Sbjct: 1136 MPIEDGPFVYLHPNSLIAESGQIPSSYLVYQS-LSTKGNISEDETKKVRMNPLVDIS 1191
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 467 (169.5 bits), Expect = 3.3e-80, Sum P(2) = 3.3e-80
Identities = 106/250 (42%), Positives = 154/250 (61%)
Query: 288 GEEEIEDACRKITKEITNMGDQVG-PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXR 346
GE+E ED + +E+ G P+ V+PLYS LP Q ++F+ R
Sbjct: 704 GEDE-EDEEEEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGS-------R 755
Query: 347 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGR 406
+V+TN+AETSLTI G+ YV+D G +K++ YN V+S V +SKASA+QRSGRAGR
Sbjct: 756 LCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGR 815
Query: 407 TQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPET 466
T PG C+RLY+ F +D + + PEILR + + VL +K + I ++++F F PP
Sbjct: 816 TGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVA 875
Query: 467 LMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 526
L +A+++L YLGALD+ +TE G+KMS FPL P+ SKML+ S + C I++I + LS
Sbjct: 876 LSKAIQLLQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALS 935
Query: 527 VPNCFVRPRE 536
V + F+ E
Sbjct: 936 VGDPFINEFE 945
Score = 413 (150.4 bits), Expect = 3.3e-80, Sum P(2) = 3.3e-80
Identities = 99/263 (37%), Positives = 144/263 (54%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLE-GVDIE-TPDRR 114
EI + R LPV+ ++ + ++ + N V+I+ GETGSGKTTQ+PQF+ E G E +PD
Sbjct: 383 EIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYP 442
Query: 115 RKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLR 174
M+ TQP E+ G +VGY IRF+ + T +K++TDG+LLR
Sbjct: 443 G--MVGITQPRRVAAVSMAERVANELG-DHGHKVGYQIRFDSTAKEDTKVKFMTDGVLLR 499
Query: 175 EAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL-------KNRP----DLKLVVMS 223
E M D L +Y I++DEAHER + TD+L G+L + K P LKL++MS
Sbjct: 500 EMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMS 559
Query: 224 ATLEAEKFQG----YFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS 279
ATL F + P+++V R PV I + + +Y + A R +IH P
Sbjct: 560 ATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPP 619
Query: 280 GDILVFLTGEEEIEDACRKITKE 302
G ILVFLTG++EI +++ KE
Sbjct: 620 GAILVFLTGQQEITHMVKRLRKE 642
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 763 (273.6 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 186/536 (34%), Positives = 297/536 (55%)
Query: 63 KSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLE-GVDIETPDRRRKMMIAC 121
+ LP+ + + + ANQV+I+ GETGSGKTTQIP+ LE G ++ +I
Sbjct: 97 EGLPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVDG-------LIGH 149
Query: 122 TQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
TQP EE+ +GE+VGY +RF D S ++ +K +TDG+LL E D L
Sbjct: 150 TQPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGILLAEMQRDRL 209
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG---- 237
L +Y I++DEAHER+L D + G LK++L RPDLKL++ SAT++ ++F +F
Sbjct: 210 LLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKHFSSKNGL 269
Query: 238 -APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLT--GEEEIE- 293
AP+++V GR PVE+ Y +R ++ ++ ++ + + L+ G +I
Sbjct: 270 PAPIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDELSDCGNGDILV 329
Query: 294 --DACRKITKEITNMGD-QVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVV 350
+ R+I + + V+PLY+ L + Q +IF+ R IV+
Sbjct: 330 FLNGEREIRDTAAALVKANLRHTNVLPLYARLTVSEQNQIFKPHSG---------RNIVL 380
Query: 351 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPG 410
+TN+AETSLT+ GI YVIDPG A+ Y+ R +V+ L + P+S+ASA+QRSGR GR G
Sbjct: 381 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVSEG 440
Query: 411 KCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 470
C RLY+E + + + T PEILR+NLA +L + L + D+ +F F++ P +
Sbjct: 441 ICIRLYSEDDYKSRAE-FTDPEILRTNLATVILQMHALDLGDIANFPFVEAPDNRNITDG 499
Query: 471 LEVLNYLGALDD----DGN-----------LTEMGEKMSEFPLDPQMSKMLVESPKYNCS 515
+ +L + A++ D N LT+ G +++FP+DP+++KM+V S ++ C
Sbjct: 500 VRLLEEIAAVESIENADKNAKGKASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIEFGCI 559
Query: 516 NEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNED 571
+IL I + LS+ + RP E Q+ +DE RF D ++LLN++ + +D
Sbjct: 560 EQILIIVSALSIQDPRERPHEKQQLSDEKHNRFKDKSSDFISLLNLWQYINEQKKD 615
Score = 79 (32.9 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 620 IRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFI 678
+ +A+L+G + + +Y + + + P + L K P+W++ E V TSR F
Sbjct: 693 VHQALLSGLLSHIGQQDENREYKGARGMKFF-IFPGSALTKKSPKWLMSAELVETSRLFA 751
Query: 679 RTVTDVRGEWLIDIAPH 695
R + WL +A H
Sbjct: 752 RMNAKIDPLWLEPLAQH 768
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 435 (158.2 bits), Expect = 2.5e-79, Sum P(3) = 2.5e-79
Identities = 91/235 (38%), Positives = 130/235 (55%)
Query: 23 KLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQ 82
++VK + M N L + K S+RY + E+R+ LP WQ++E L+ L NQ
Sbjct: 540 RMVKKTEIRTEQMQEENKKLCREFKRKRSSRRYISMQEQRQKLPAWQKREAILECLVKNQ 599
Query: 83 VIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDV 142
V+++ G TG GKTTQIPQF+L+ ++T R I CTQP +E
Sbjct: 600 VLVISGMTGCGKTTQIPQFILDNF-LQTGRPDRVANIICTQPRRISAIAVATRVAQERAE 658
Query: 143 TIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDV 202
+G GY IR E S+ T L + T G+LLR DP L +++DE HERT +D
Sbjct: 659 ALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDF 718
Query: 203 LFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
L +LK+++ R DLK+++MSATL AE F YF P + +PGR PVE F+ ++
Sbjct: 719 LLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVEQFFLED 773
Score = 423 (154.0 bits), Expect = 2.5e-79, Sum P(3) = 2.5e-79
Identities = 112/350 (32%), Positives = 178/350 (50%)
Query: 261 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 320
D +E+ + +V P G +LVFL G EI+ ++ + V PL+S
Sbjct: 872 DLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHS 931
Query: 321 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 380
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 932 SLSNEEQQAVFTRPQNGVT-------KIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDA 984
Query: 381 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 440
+ESL +S+A+A QR GRAGR G CF L+T F + L Q PEI R L
Sbjct: 985 SRSMESLEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQ 1044
Query: 441 TVLTLKKLGID-----DLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSE 495
L +K L + D V ++PP +L A + L LGAL D+ +LT +G ++
Sbjct: 1045 LCLRVKVLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLAC 1104
Query: 496 FPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDH 555
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A+E K F + DH
Sbjct: 1105 LPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLANSDH 1164
Query: 556 LTLLNVYHAYKQNNEDP-----SWCYDNFVNHRALKSADNVRQQLVRIMA 600
L L+ Y + + +C +NF++ R L+ +++Q +++
Sbjct: 1165 LALMQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLS 1214
Score = 66 (28.3 bits), Expect = 2.5e-79, Sum P(3) = 2.5e-79
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 640 QYLTVKDNQVVHLHPSNC---LDHKPE-WVIYNEYVLTSRNFIR 679
+++T D VH+HPS+ + H +++Y+E V TSR FIR
Sbjct: 1297 RFMTKSDG-AVHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIR 1339
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 426 (155.0 bits), Expect = 9.3e-78, Sum P(3) = 9.3e-78
Identities = 88/239 (36%), Positives = 137/239 (57%)
Query: 19 SVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVL 78
++ KL + V + N N + ++ K S+R+ +L +R+ LP WQ++E L +L
Sbjct: 491 NLKKKLSRKYDVHSKSTYNENVKICMQFRLKKSSRRFQSMLHERQKLPAWQERETILDLL 550
Query: 79 KANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXE 138
++QV+++ G TG GKTTQIPQF+L+ +P+ I CTQP +
Sbjct: 551 TSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVAN--IICTQPRRISAISVAERVAK 608
Query: 139 EMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTL 198
E +G VGY IR E S+ T L Y T G+LLR D L+ +++DE HERT
Sbjct: 609 ERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGITHVIVDEVHERTE 668
Query: 199 ATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
+D L +LK+++ RPDL++++MSATL AE F YF+ P++ +PGR PV+ F+ ++
Sbjct: 669 ESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLED 727
Score = 420 (152.9 bits), Expect = 9.3e-78, Sum P(3) = 9.3e-78
Identities = 110/350 (31%), Positives = 183/350 (52%)
Query: 261 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 320
+ +EA + +V P G +L+FL G EI+ ++ V PL+S
Sbjct: 822 ELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHS 881
Query: 321 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 380
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+P
Sbjct: 882 SLSSEEQQSVFLRPPAGVI-------KIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDP 934
Query: 381 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 440
+ESL + +S+A+A QR GRAGR G CF L++ +N+ L Q PEI R L
Sbjct: 935 SKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQ 994
Query: 441 TVLTLKKLGIDDL--VHF---DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSE 495
L +K L + +H ++PP E+L + L LGAL D LT +G ++
Sbjct: 995 LCLRIKILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLTPLGYHLAS 1054
Query: 496 FPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDH 555
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D+
Sbjct: 1055 LPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEANKKKLDFAVGNSDY 1114
Query: 556 LTLLNVYHAYKQNNEDPS-----WCYDNFVNHRALKSADNVRQQLVRIMA 600
L LL Y ++ + ++ S +C +NF++ R L+ ++++Q +++
Sbjct: 1115 LALLQAYKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQFTELLS 1164
Score = 64 (27.6 bits), Expect = 9.3e-78, Sum P(3) = 9.3e-78
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 640 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 679
+++T K++ VH+HPS+ H + +++Y+E + TSR FIR
Sbjct: 1247 KFVT-KNDGYVHIHPSSVNYQTRHFESPYLVYHEKIKTSRVFIR 1289
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 422 (153.6 bits), Expect = 4.7e-77, Sum P(3) = 4.7e-77
Identities = 112/351 (31%), Positives = 186/351 (52%)
Query: 261 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 320
+ +EA + +V P G ILVFL G EI+ ++ + + PL+S
Sbjct: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 888
Query: 321 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 380
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 889 SLSSEEQQAVFVKPPAGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 941
Query: 381 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 440
+ESL + +S+A+A QR GRAGR G CF L+T +N+ L Q PEI R L
Sbjct: 942 SKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQ 1001
Query: 441 TVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEKMS 494
L +K L + +L V ++PP ++L RA ++ L LGAL D LT +G ++
Sbjct: 1002 LCLRIKILEMFSAHNLQSVFSRLIEPPHTDSL-RASKIRLRDLGALTPDERLTPLGYHLA 1060
Query: 495 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGD 554
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D
Sbjct: 1061 SLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSD 1120
Query: 555 HLTLLNVYHAYKQNNEDP-----SWCYDNFVNHRALKSADNVRQQLVRIMA 600
+L LL Y ++ + ++ ++C NF++ R L+ ++++Q +++
Sbjct: 1121 YLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLS 1171
Score = 419 (152.6 bits), Expect = 4.7e-77, Sum P(3) = 4.7e-77
Identities = 84/219 (38%), Positives = 130/219 (59%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
N + ++ K S+++ IL++R+SLP W+++E L +L+ +QV+++ G TG GKTTQI
Sbjct: 518 NGKICKQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQI 577
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
PQF+L+ + P + +I CTQP +E +G VGY IR E
Sbjct: 578 PQFILDD-SLNGPPEKVANII-CTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVK 635
Query: 159 SARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLK 218
S+ T L Y T G+LLR D L+ I++DE HERT +D L +LK+++ RP L+
Sbjct: 636 SSATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQ 695
Query: 219 LVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
+++MSATL AE F YF P++ +PGR PV+ F+ ++
Sbjct: 696 VILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLED 734
Score = 63 (27.2 bits), Expect = 4.7e-77, Sum P(3) = 4.7e-77
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 640 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 679
+++T K++ VH+HPS+ + H +++Y+E + TSR FIR
Sbjct: 1253 KFVT-KNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1295
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 421 (153.3 bits), Expect = 2.7e-76, Sum P(3) = 2.7e-76
Identities = 114/351 (32%), Positives = 186/351 (52%)
Query: 261 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 320
+ +EA + +V P G ILVFL G EI+ ++ + V PL+S
Sbjct: 825 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHS 884
Query: 321 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 380
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 885 SLSSEEQQAVFVKPPVGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 937
Query: 381 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 440
+ESL + +S+A+A QR GRAGR G CF L+T FN+ L Q PEI R L
Sbjct: 938 SKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQ 997
Query: 441 TVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEKMS 494
L +K L + +L V ++PP ++L RA ++ L LGAL D LT +G ++
Sbjct: 998 LCLRIKILEMFSTHNLQSVFSRLIEPPHTDSL-RASKIRLRDLGALTPDEKLTPLGYHLA 1056
Query: 495 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGD 554
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D
Sbjct: 1057 SLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSD 1116
Query: 555 HLTLLNVYHAYKQNNEDP-----SWCYDNFVNHRALKSADNVRQQLVRIMA 600
+L LL Y ++ + ++ ++C NF++ R L+ ++++Q +++
Sbjct: 1117 YLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLS 1167
Score = 412 (150.1 bits), Expect = 2.7e-76, Sum P(3) = 2.7e-76
Identities = 84/219 (38%), Positives = 131/219 (59%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
N + ++ K S+++ IL++R+SLP W+++E L++L +QV+++ G TG GKTTQI
Sbjct: 514 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQI 573
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
PQF+L+ + P + +I CTQP +E +G VGY IR E
Sbjct: 574 PQFILDD-SLSGPPEKVANII-CTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVK 631
Query: 159 SARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLK 218
S+ T L Y T G+LLR D L+ I++DE HERT +D L +LK+++ RP+L+
Sbjct: 632 SSATRLLYCTTGVLLRRLEGDTSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQ 691
Query: 219 LVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
+++MSATL AE F YF P++ +PGR PV+ F+ ++
Sbjct: 692 VILMSATLNAELFSEYFSSCPVITIPGRTFPVDQFFLED 730
Score = 64 (27.6 bits), Expect = 2.7e-76, Sum P(3) = 2.7e-76
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 640 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 679
+++T K++ VH+HPS+ + H +++Y+E + TSR FIR
Sbjct: 1249 KFVT-KNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIR 1291
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 436 (158.5 bits), Expect = 6.6e-76, Sum P(3) = 6.6e-76
Identities = 97/254 (38%), Positives = 147/254 (57%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
EI E R LP+ +++ ++ + N ++++ GETGSGKTTQ+PQF+ E +
Sbjct: 234 EIQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNG---- 289
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
+I T+P +EM+++ V Y IR+E ++ T +K++TDG+LL+E
Sbjct: 290 -IIGITEPRRVAAVSMSQRVAKEMNLS-HRVVSYQIRYEGNTTDETQIKFMTDGVLLKEV 347
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD----LKLVVMSATLEAEKFQ 232
D LL +YKVI++DEAHER++ TD+L GLL ++ R LKL++MSATL E F
Sbjct: 348 QKDFLLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFT 407
Query: 233 G---YFYGAP-LMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIHMCEPSGDILVFLT 287
F G P +++V R PV + + ++ P DY R V +IH PSG ILVFLT
Sbjct: 408 ENTRLFAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHRMLPSGGILVFLT 467
Query: 288 GEEEIEDACRKITK 301
G+ E+ CR++ K
Sbjct: 468 GQAEVHSLCRRLRK 481
Score = 355 (130.0 bits), Expect = 6.6e-76, Sum P(3) = 6.6e-76
Identities = 91/235 (38%), Positives = 133/235 (56%)
Query: 312 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 371
P+ V+PLYS L P Q K+F R VV+TN+AETSLTI GI YV+D G
Sbjct: 576 PLYVLPLYSLLAPEKQAKVFRPPPPGT-------RLCVVATNVAETSLTIPGIKYVVDCG 628
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
K++ Y+ V S V+ IS+ASA+QR+GRAGRT+PG C+RLY+ F D + + P
Sbjct: 629 KVKKRFYDKITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFM-DFEKFSAP 687
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD---GNLTE 488
EI + + + +L +K L I+ +++F F PP E L A E+L LGAL + G L E
Sbjct: 688 EITKRPVEDLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKE 747
Query: 489 ------------MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCF 531
+G M+ FP+ P+ +KML S +++C ++I + ++V F
Sbjct: 748 QQAAKLSCPISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELF 802
Score = 95 (38.5 bits), Expect = 6.6e-76, Sum P(3) = 6.6e-76
Identities = 37/159 (23%), Positives = 71/159 (44%)
Query: 553 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNLKLCS 608
GD + +L A + + P +C +N + ++A+ +R QL + L +
Sbjct: 842 GDLMVMLGAVGACEYSGCTPKFCEENGLRYKAMLEIRRLRGQLTTAVNSVCTDAGLYVDP 901
Query: 609 NDFNSRDYYVN-IRKAMLAGYFMQVAHLERTGQ---------YLTVKDNQVVHLHPSNCL 658
+ +R+ +LAG +A + + Y T + V +HPS+ L
Sbjct: 902 KMKPPTEAQATYLRQIVLAGLGDHLARRVQAEELLDDKWKNAYKTALLDDPVFIHPSSVL 961
Query: 659 DHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 696
+ PE+V+Y E V T++ +++ V+ V EW+ + P Y
Sbjct: 962 FKQLPEFVVYQEIVETTKLYMKGVSAVEPEWIPALLPPY 1000
Score = 38 (18.4 bits), Expect = 9.4e-43, Sum P(3) = 9.4e-43
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 500 PQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLT 557
P+++K VE + L+I +++ P P EA AA+E G + +T
Sbjct: 687 PEITKRPVED--LILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMT 742
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 421 (153.3 bits), Expect = 8.8e-76, Sum P(3) = 8.8e-76
Identities = 98/258 (37%), Positives = 147/258 (56%)
Query: 53 QRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPD 112
+R EI E R LPV +++ ++ +K ++ ++L GETGSGKTTQ+PQF+ E +
Sbjct: 240 ERLPEIQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGG 299
Query: 113 RRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGML 172
+I T+P EM+++ G V Y IR+E + T +K +TDG+L
Sbjct: 300 -----IIGVTEPRRVAAISMSHRVATEMNLSSGV-VSYQIRYEGNVTENTKIKVMTDGVL 353
Query: 173 LREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV--LKNRPDL--KLVVMSATLEA 228
L+E D LL++Y VI++DEAHER++ TD+L GLL + L+N+ L KL++MSATL
Sbjct: 354 LKEIQRDFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRV 413
Query: 229 EKF---QGYFYGAP-LMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIHMCEPSGDIL 283
E F + F P ++KV R V + + + P DY R + +IH P G IL
Sbjct: 414 EDFTENKRLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPGGIL 473
Query: 284 VFLTGEEEIEDACRKITK 301
VFLTG+ E+ CR++ K
Sbjct: 474 VFLTGQAEVHSVCRRLRK 491
Score = 362 (132.5 bits), Expect = 8.8e-76, Sum P(3) = 8.8e-76
Identities = 94/235 (40%), Positives = 132/235 (56%)
Query: 312 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 371
P+ V+PLYS L P Q K+F R VV+TN+AETSLTI GI YV+D G
Sbjct: 579 PLYVLPLYSLLAPEQQAKVFRPPPAGS-------RLCVVATNVAETSLTIPGIKYVVDCG 631
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
K++ Y+ V S V+ IS+ASA+QR+GRAGRT+PG C+RLY+ F D +
Sbjct: 632 RVKKRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFG-DFSLFSEA 690
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD---GNLTE 488
EI R + + VL +K L I+ +V+F F PP+ E L+ A E+L LGAL+ G L+E
Sbjct: 691 EITRRPVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSE 750
Query: 489 M------------GEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCF 531
M G M+ FP+ P+ +KML + C I++I + ++V F
Sbjct: 751 MEKARLSCPISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIF 805
Score = 105 (42.0 bits), Expect = 8.8e-76, Sum P(3) = 8.8e-76
Identities = 41/164 (25%), Positives = 74/164 (45%)
Query: 553 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNLKLCS 608
GD + LL A + P +C +N + +A+ +R QL + A ++ + +
Sbjct: 845 GDLMVLLGAVGACEFAGLTPQFCEENGLRFKAMLEIRRLRGQLTNAVNAVCADADVYVDN 904
Query: 609 NDFNSRDYYVN-IRKAMLAGYFMQVAHLERTGQYLTVKDNQV---------VHLHPSNCL 658
+ V +R+ +LAG +A + + L K V +HPS+ L
Sbjct: 905 KMAPPTEAQVLCLRQIVLAGLGDHIARRVQAEELLDPKWRNAYKTPLLDDPVFIHPSSAL 964
Query: 659 DHK--PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 700
HK PE+V+Y E + T++ ++R V V+ +W+ + P Y S
Sbjct: 965 -HKTLPEFVVYQEIMETTKMYMRGVCAVQDDWIPKLLPQYCHFS 1007
Score = 37 (18.1 bits), Expect = 8.6e-42, Sum P(3) = 8.6e-42
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 374 KQKVYNPRVRVESLLVSPISKASAHQRSG 402
K+ V PR+ +++ P+ + +++G
Sbjct: 519 KKNVSLPRINLDNYSALPVDEGDEDRQAG 547
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 416 (151.5 bits), Expect = 2.9e-75, Sum P(3) = 2.9e-75
Identities = 114/353 (32%), Positives = 187/353 (52%)
Query: 261 DYLEAAIRTVVQ-IHMCEPS-GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPL 318
+ +EA + +V H P G ILVFL G EI+ ++ + + PL
Sbjct: 822 ELIEALLEWIVDGKHSYPPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPL 881
Query: 319 YSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 378
+S+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y
Sbjct: 882 HSSLSSEEQQAVFVKPPMGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRY 934
Query: 379 NPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 438
+ +ESL + +S+A+A QR GRAGR G CF L+T FN+ L Q PEI R L
Sbjct: 935 DASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPL 994
Query: 439 ANTVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEK 492
L +K L + +L V ++PP ++L RA ++ L LGAL D LT +G
Sbjct: 995 EQLCLRIKILEMFSTHNLQSVFARLIEPPHADSL-RASKIRLRDLGALTPDETLTPLGYH 1053
Query: 493 MSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHID 552
++ P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F +
Sbjct: 1054 LASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN 1113
Query: 553 GDHLTLLNVYHAYKQNNEDP-----SWCYDNFVNHRALKSADNVRQQLVRIMA 600
D+L LL Y ++ + ++ ++C NF++ R L+ ++++Q +++
Sbjct: 1114 SDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLS 1166
Score = 408 (148.7 bits), Expect = 2.9e-75, Sum P(3) = 2.9e-75
Identities = 83/219 (37%), Positives = 130/219 (59%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
N + ++ K S+++ +L++R+SLP W+++E L++L +QV+++ G TG GKTTQI
Sbjct: 511 NVKICKQFRIKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQI 570
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
PQF+L+ + P + +I CTQP +E +G VGY IR E
Sbjct: 571 PQFILDD-SLNGPPEKVANII-CTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVK 628
Query: 159 SARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLK 218
S+ T L Y T G+LLR D L+ I++DE HERT +D L +LK+++ RP L+
Sbjct: 629 SSATRLLYCTTGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQ 688
Query: 219 LVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
+++MSATL AE F YF P++ +PGR PV+ F+ ++
Sbjct: 689 VILMSATLNAELFSEYFNSCPVITIPGRTFPVDQFFLED 727
Score = 64 (27.6 bits), Expect = 2.9e-75, Sum P(3) = 2.9e-75
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 640 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 679
+++T K++ VH+HPS+ + H +++Y+E + TSR FIR
Sbjct: 1249 KFVT-KNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIR 1291
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 424 (154.3 bits), Expect = 6.9e-75, Sum P(3) = 6.9e-75
Identities = 97/255 (38%), Positives = 149/255 (58%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
E+ E+R LP+ +++ ++ + + ++I+ GETGSGKTTQ+PQF+ E + D
Sbjct: 31 EMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEA-GFSSEDS--- 86
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
+I T+P +EM+++ V Y IR+E + T +K++TDG+LL+E
Sbjct: 87 -IIGVTEPRRVAAVAMSQRVAKEMNLS-QRVVSYQIRYEGNVTEETRIKFMTDGVLLKEI 144
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL-----KNRPDLKLVVMSATLEAEKF 231
D LL RYKV+++DEAHER++ TD+L GLL ++ +N P LKL++MSATL E F
Sbjct: 145 QKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLP-LKLLIMSATLRVEDF 203
Query: 232 -QG---YFYGAPLMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIHMCEPSGDILVFL 286
Q + P++KV R PV + + + P DY R V +IH P+G ILVFL
Sbjct: 204 TQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFL 263
Query: 287 TGEEEIEDACRKITK 301
TG+ E+ CR++ K
Sbjct: 264 TGQAEVHALCRRLRK 278
Score = 359 (131.4 bits), Expect = 6.9e-75, Sum P(3) = 6.9e-75
Identities = 93/251 (37%), Positives = 138/251 (54%)
Query: 312 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 371
P+ V+PLYS L P Q ++F+ R VV+TN+AETSLTI GI YV+D G
Sbjct: 374 PLHVLPLYSLLAPEKQAQVFKPPPEGT-------RLCVVATNVAETSLTIPGIKYVVDCG 426
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
K++ Y+ V S V+ +S+ASA QR+GRAGRT+PG C+RLY+ F D + P
Sbjct: 427 KVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DFEQFPPP 485
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD---------- 481
EI R + + +L +K L ++ +++F F PP+ E L+ A E+L LGAL
Sbjct: 486 EITRRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQ 545
Query: 482 -DDGNL----TEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
+ L T +G M+ FP+ P+ +KML S ++ C ++I A ++V F +
Sbjct: 546 LQENRLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF-EELD 604
Query: 537 AQKAADEAKAR 547
A+DE R
Sbjct: 605 RPAASDEELTR 615
Score = 91 (37.1 bits), Expect = 6.9e-75, Sum P(3) = 6.9e-75
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 553 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNL---- 604
GD + LL A + + P +C N + ++A+ +R QL + L
Sbjct: 640 GDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTTAVNAVCPEAELFVDP 699
Query: 605 KLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERT------GQYLTVKDNQVVHLHPSNCL 658
K+ + Y I A L + + E Y T + V +HPS+ L
Sbjct: 700 KMQPPTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVL 759
Query: 659 DHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 696
+ PE+V+Y E V T++ +++ V+ V +W+ + P Y
Sbjct: 760 FKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 798
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 416 (151.5 bits), Expect = 1.7e-74, Sum P(3) = 1.7e-74
Identities = 113/351 (32%), Positives = 186/351 (52%)
Query: 261 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 320
+ +EA + +V P G ILVFL G EI+ ++ + + PL+S
Sbjct: 781 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 840
Query: 321 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 380
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 841 SLSSEEQQAVFVKPPLGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 893
Query: 381 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 440
+ESL + +S+A+A QR GRAGR G CF L+T +N+ L Q PEI R L
Sbjct: 894 GKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQ 953
Query: 441 TVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEKMS 494
L +K L + +L V ++PP ++L RA +V L LGAL D LT +G ++
Sbjct: 954 LCLRIKILEMFSTHNLQSVFSRLIEPPHVDSL-RASKVRLRDLGALTPDEKLTPLGYHLA 1012
Query: 495 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGD 554
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D
Sbjct: 1013 SLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSD 1072
Query: 555 HLTLLNVYHAYKQNNEDPS-----WCYDNFVNHRALKSADNVRQQLVRIMA 600
+L LL Y ++ + ++ + +C NF++ R L+ ++++Q +++
Sbjct: 1073 YLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLS 1123
Score = 401 (146.2 bits), Expect = 1.7e-74, Sum P(3) = 1.7e-74
Identities = 82/224 (36%), Positives = 132/224 (58%)
Query: 34 AMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSG 93
++ N+ + ++ K S++++ IL++R+ LP W+++E L++L +QV+++ G TG G
Sbjct: 464 SLFAENSKICRQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCG 523
Query: 94 KTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIR 153
KTTQIPQF+L+ + P R +I CTQP +E +G VGY IR
Sbjct: 524 KTTQIPQFILDN-SLNGPPERVANII-CTQPRRISAISVAERVAKERAERVGLTVGYQIR 581
Query: 154 FEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN 213
E S+ T L Y T G+LLR D L+ I++DE HERT +D L +LK+++
Sbjct: 582 LESVKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQ 641
Query: 214 RPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
R L++++MSATL+A F YF P++ +PGR PV+ F+ ++
Sbjct: 642 RATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLED 685
Score = 63 (27.2 bits), Expect = 1.7e-74, Sum P(3) = 1.7e-74
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 640 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 679
+++T K++ VH+HPS+ + H +++Y+E + TSR FIR
Sbjct: 1205 KFVT-KNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1247
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 416 (151.5 bits), Expect = 2.1e-74, Sum P(3) = 2.1e-74
Identities = 113/351 (32%), Positives = 186/351 (52%)
Query: 261 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 320
+ +EA + +V P G ILVFL G EI+ ++ + + PL+S
Sbjct: 834 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 893
Query: 321 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 380
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 894 SLSSEEQQAVFVKPPLGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 946
Query: 381 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 440
+ESL + +S+A+A QR GRAGR G CF L+T +N+ L Q PEI R L
Sbjct: 947 GKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQ 1006
Query: 441 TVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEKMS 494
L +K L + +L V ++PP ++L RA +V L LGAL D LT +G ++
Sbjct: 1007 LCLRIKILEMFSTHNLQSVFSRLIEPPHVDSL-RASKVRLRDLGALTPDEKLTPLGYHLA 1065
Query: 495 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGD 554
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D
Sbjct: 1066 SLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSD 1125
Query: 555 HLTLLNVYHAYKQNNEDPS-----WCYDNFVNHRALKSADNVRQQLVRIMA 600
+L LL Y ++ + ++ + +C NF++ R L+ ++++Q +++
Sbjct: 1126 YLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLS 1176
Score = 401 (146.2 bits), Expect = 2.1e-74, Sum P(3) = 2.1e-74
Identities = 82/224 (36%), Positives = 132/224 (58%)
Query: 34 AMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSG 93
++ N+ + ++ K S++++ IL++R+ LP W+++E L++L +QV+++ G TG G
Sbjct: 517 SLFAENSKICRQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCG 576
Query: 94 KTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIR 153
KTTQIPQF+L+ + P R +I CTQP +E +G VGY IR
Sbjct: 577 KTTQIPQFILDN-SLNGPPERVANII-CTQPRRISAISVAERVAKERAERVGLTVGYQIR 634
Query: 154 FEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN 213
E S+ T L Y T G+LLR D L+ I++DE HERT +D L +LK+++
Sbjct: 635 LESVKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQ 694
Query: 214 RPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
R L++++MSATL+A F YF P++ +PGR PV+ F+ ++
Sbjct: 695 RATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLED 738
Score = 63 (27.2 bits), Expect = 2.1e-74, Sum P(3) = 2.1e-74
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 640 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 679
+++T K++ VH+HPS+ + H +++Y+E + TSR FIR
Sbjct: 1258 KFVT-KNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1300
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 424 (154.3 bits), Expect = 2.3e-74, Sum P(3) = 2.3e-74
Identities = 97/255 (38%), Positives = 149/255 (58%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
E+ E+R LP+ +++ ++ + + ++I+ GETGSGKTTQ+PQF+ E + D
Sbjct: 244 EMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEA-GFSSEDS--- 299
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
+I T+P +EM+++ V Y IR+E + T +K++TDG+LL+E
Sbjct: 300 -IIGVTEPRRVAAVAMSQRVAKEMNLS-QRVVSYQIRYEGNVTEETRIKFMTDGVLLKEI 357
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL-----KNRPDLKLVVMSATLEAEKF 231
D LL RYKV+++DEAHER++ TD+L GLL ++ +N P LKL++MSATL E F
Sbjct: 358 QKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLP-LKLLIMSATLRVEDF 416
Query: 232 -QG---YFYGAPLMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIHMCEPSGDILVFL 286
Q + P++KV R PV + + + P DY R V +IH P+G ILVFL
Sbjct: 417 TQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFL 476
Query: 287 TGEEEIEDACRKITK 301
TG+ E+ CR++ K
Sbjct: 477 TGQAEVHALCRRLRK 491
Score = 359 (131.4 bits), Expect = 2.3e-74, Sum P(3) = 2.3e-74
Identities = 93/251 (37%), Positives = 138/251 (54%)
Query: 312 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 371
P+ V+PLYS L P Q ++F+ R VV+TN+AETSLTI GI YV+D G
Sbjct: 587 PLHVLPLYSLLAPEKQAQVFKPPPEGT-------RLCVVATNVAETSLTIPGIKYVVDCG 639
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
K++ Y+ V S V+ +S+ASA QR+GRAGRT+PG C+RLY+ F D + P
Sbjct: 640 KVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DFEQFPPP 698
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD---------- 481
EI R + + +L +K L ++ +++F F PP+ E L+ A E+L LGAL
Sbjct: 699 EITRRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQ 758
Query: 482 -DDGNL----TEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
+ L T +G M+ FP+ P+ +KML S ++ C ++I A ++V F +
Sbjct: 759 LQENRLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF-EELD 817
Query: 537 AQKAADEAKAR 547
A+DE R
Sbjct: 818 RPAASDEELTR 828
Score = 91 (37.1 bits), Expect = 2.3e-74, Sum P(3) = 2.3e-74
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 553 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNL---- 604
GD + LL A + + P +C N + ++A+ +R QL + L
Sbjct: 853 GDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTTAVNAVCPEAELFVDP 912
Query: 605 KLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERT------GQYLTVKDNQVVHLHPSNCL 658
K+ + Y I A L + + E Y T + V +HPS+ L
Sbjct: 913 KMQPPTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVL 972
Query: 659 DHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 696
+ PE+V+Y E V T++ +++ V+ V +W+ + P Y
Sbjct: 973 FKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 1011
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 415 (151.1 bits), Expect = 2.7e-74, Sum P(3) = 2.7e-74
Identities = 112/351 (31%), Positives = 186/351 (52%)
Query: 261 DYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYS 320
+ +EA + +V P G +LVFL G EI+ ++ + + PL+S
Sbjct: 831 ELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 890
Query: 321 TLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 380
+L QQ +F KI++STNIAETS+TID +VYVID G K+K Y+
Sbjct: 891 SLSSEEQQAVFVKPPMGVT-------KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 943
Query: 381 RVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 440
+ESL + +S+A+A QR GRAGR G CF L+T +N+ L Q PEI R L
Sbjct: 944 GKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQ 1003
Query: 441 TVLTLKKLGI---DDL--VHFDFMDPPAPETLMRALEV-LNYLGALDDDGNLTEMGEKMS 494
L +K L + +L V ++PP ++L RA +V L LGAL D LT +G ++
Sbjct: 1004 LCLRIKILEMFSTHNLQSVFSRLIEPPHIDSL-RASKVRLRDLGALTPDEKLTPLGYHLA 1062
Query: 495 EFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGD 554
P+D ++ K+++ + C + L+I+A L+ + FV P + ++ A++ K F + D
Sbjct: 1063 SLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSD 1122
Query: 555 HLTLLNVYHAYKQNNEDPS-----WCYDNFVNHRALKSADNVRQQLVRIMA 600
+L LL Y ++ + ++ + +C NF++ R L+ ++++Q +++
Sbjct: 1123 YLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLS 1173
Score = 401 (146.2 bits), Expect = 2.7e-74, Sum P(3) = 2.7e-74
Identities = 82/224 (36%), Positives = 132/224 (58%)
Query: 34 AMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSG 93
++ N+ + ++ K S++++ IL++R+ LP W+++E L++L +QV+++ G TG G
Sbjct: 514 SLFAENSKICRQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCG 573
Query: 94 KTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIR 153
KTTQIPQF+L+ + P R +I CTQP +E +G VGY IR
Sbjct: 574 KTTQIPQFILDN-SLNGPPERVANII-CTQPRRISAISVAERVAKERAERVGLTVGYQIR 631
Query: 154 FEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN 213
E S+ T L Y T G+LLR D L+ I++DE HERT +D L +LK+++
Sbjct: 632 LESVKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQ 691
Query: 214 RPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
R L++++MSATL+A F YF P++ +PGR PV+ F+ ++
Sbjct: 692 RATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLED 735
Score = 63 (27.2 bits), Expect = 2.7e-74, Sum P(3) = 2.7e-74
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 640 QYLTVKDNQVVHLHPSNC---LDH-KPEWVIYNEYVLTSRNFIR 679
+++T K++ VH+HPS+ + H +++Y+E + TSR FIR
Sbjct: 1255 KFVT-KNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1297
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 434 (157.8 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 126/398 (31%), Positives = 203/398 (51%)
Query: 215 PDLKLVVMSATLEAEKFQGYF-YGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQ- 272
P K+ TL AE +Q Y Y P K + P+ I PE +E+ ++ +V+
Sbjct: 693 PGKKIKDEKLTL-AETYQRYAEYSKPTCKSIYLMEPMTI----NPE--LIESVLKYIVEG 745
Query: 273 IHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFE 332
H G IL+FL G EI+ + + G +VPL+S L Q +F+
Sbjct: 746 SHDWPREGTILIFLPGFGEIQSVHDSLLDNAL-FSPRAGKFILVPLHSALSGEDQALVFK 804
Query: 333 XXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPI 392
RKIV+STNIAETS+TID V+V+D G K+K ++ +ESL + +
Sbjct: 805 KAPPGK-------RKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWV 857
Query: 393 SKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGI-- 450
S+A+A QR GRAGR PG C LYT + + Q PEI R L VL +K L
Sbjct: 858 SRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFA 917
Query: 451 --DDL-VHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLV 507
+ L V + ++ P ++++ AL L +GALD + LT +G ++ P+D ++ K+++
Sbjct: 918 SRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLML 977
Query: 508 ESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY-- 565
+ C + +L+I+A LS + FV P + AD+ K F + DHLT+LN Y +
Sbjct: 978 YGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLD 1037
Query: 566 --KQNNEDPSWCY--DNFVNHRALKSADNVRQQLVRIM 599
++ N S Y ++F++ L++ +++ Q + ++
Sbjct: 1038 VARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELL 1075
Score = 395 (144.1 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 82/229 (35%), Positives = 131/229 (57%)
Query: 34 AMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSG 93
A N L+ ++ + +RY +I++ RK LP + + E L +++++ V+++ GETG G
Sbjct: 422 AQTRENRRLLQQFVERRKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCG 481
Query: 94 KTTQIPQFVLEG-----VDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEV 148
K+TQ+PQF+L+ + + + + I CTQP E IG+ V
Sbjct: 482 KSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLV 541
Query: 149 GYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLK 208
GY IR E+ S T L + T G+LLR +DPLL +++DE HER+ +D L +LK
Sbjct: 542 GYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILK 601
Query: 209 EVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
+L+ R DLK+++MSATL A F YF GAP++ +PGR PV+ + ++
Sbjct: 602 NLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLED 650
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 419 (152.6 bits), Expect = 4.6e-74, Sum P(3) = 4.6e-74
Identities = 96/254 (37%), Positives = 147/254 (57%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
E+ E+R LP+ +++ ++ + + ++I+ GETGSGKTTQ+PQF+ E + D
Sbjct: 240 EMQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEA-GYSSEDS--- 295
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
+I T+P +EM+++ V Y IR+E + T +K++TDG+LL+E
Sbjct: 296 -IIGVTEPRRVAAVAMSQRVAKEMNLS-HRVVSYQIRYEGNVTEETRIKFMTDGVLLKEI 353
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPDLKLVVMSATLEAEKF- 231
D LL +YKV+++DEAHER++ TD+L GLL ++ K LKL++MSATL E F
Sbjct: 354 QKDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFT 413
Query: 232 --QGYFYGAP-LMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIHMCEPSGDILVFLT 287
Q F P ++KV R PV + + + P DY R V +IH P+G ILVFLT
Sbjct: 414 QNQRLFTTPPPVIKVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHRMLPAGGILVFLT 473
Query: 288 GEEEIEDACRKITK 301
G+ E+ CR++ K
Sbjct: 474 GQAEVHALCRRLRK 487
Score = 356 (130.4 bits), Expect = 4.6e-74, Sum P(3) = 4.6e-74
Identities = 92/245 (37%), Positives = 135/245 (55%)
Query: 305 NMGDQVG---PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTI 361
N G+Q P+ V+PLYS L P Q ++F+ R V++TN+AETSLTI
Sbjct: 570 NEGEQPDASLPLHVLPLYSLLAPEKQAQVFKPPPEGT-------RLCVIATNVAETSLTI 622
Query: 362 DGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSF 421
GI YV+D G K++ Y+ V S V+ +S+ASA QR+GRAGRT+PG C+RLY+ F
Sbjct: 623 PGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF 682
Query: 422 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 481
D + PEI R + + +L +K L I+ +++F F PP+ E L+ A E+L LGAL
Sbjct: 683 G-DFEQFPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQ 741
Query: 482 DDGN---------------LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 526
+T +G MS FP+ P+ +KML S ++ C ++I A ++
Sbjct: 742 APPKQERMKKLQMSQLSCPITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMT 801
Query: 527 VPNCF 531
V F
Sbjct: 802 VRELF 806
Score = 97 (39.2 bits), Expect = 4.6e-74, Sum P(3) = 4.6e-74
Identities = 39/159 (24%), Positives = 69/159 (43%)
Query: 553 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNLKLCS 608
GD + LL A + P +C N + ++A+ +R QL + L L
Sbjct: 846 GDLMVLLGAVGACEYAGCSPQFCQANGLRYKAMLEIRRLRGQLTTAVNAVCPEAGLFLDP 905
Query: 609 NDFNSRDYYVN-IRKAMLAGYFMQVAHLERT---------GQYLTVKDNQVVHLHPSNCL 658
+ V +R+ M AG +A ++ Y T + V +HPS+ L
Sbjct: 906 KMQPPTESQVTYLRQIMAAGLGDHLARRVQSEDLLDPKWKNAYKTPLLDDPVFIHPSSVL 965
Query: 659 DHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 696
+ PE+V+Y E V T++ +++ V+ V +W+ + P Y
Sbjct: 966 FRELPEFVVYQEIVETTKMYMKGVSTVEIQWIPSLLPSY 1004
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 417 (151.9 bits), Expect = 5.0e-74, Sum P(3) = 5.0e-74
Identities = 95/254 (37%), Positives = 147/254 (57%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
E+ E+R LP+ +++ ++ + + ++I+ GETGSGKTTQ+PQF+ E + D
Sbjct: 242 EMQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAG--YSSDNS-- 297
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
+I T+P +EM+++ V Y IR+E + T +K++TDG+LL+E
Sbjct: 298 -VIGVTEPRRVAAVAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRIKFMTDGVLLKEI 355
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPDLKLVVMSATLEAEKF- 231
D LL +YKV+++DEAHER++ TD+L GLL ++ K LKL++MSATL E F
Sbjct: 356 QKDFLLLKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFT 415
Query: 232 --QGYF-YGAPLMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIHMCEPSGDILVFLT 287
Q F P++KV R PV + + + P DY R V +IH P+G ILVFLT
Sbjct: 416 QNQRLFTQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLT 475
Query: 288 GEEEIEDACRKITK 301
G+ E+ CR++ +
Sbjct: 476 GQAEVHALCRRLRR 489
Score = 368 (134.6 bits), Expect = 5.0e-74, Sum P(3) = 5.0e-74
Identities = 95/251 (37%), Positives = 139/251 (55%)
Query: 312 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 371
P+ V+PLYS L P Q ++F+ R VV+TN+AETSLTI GI YV+D G
Sbjct: 585 PLHVLPLYSLLAPEKQAQVFQPPPEGT-------RLCVVATNVAETSLTIPGIKYVVDCG 637
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
K++ Y+ V S V+ +S+ASA QR+GRAGRT+PG C+RLY+ F D + P
Sbjct: 638 KVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DFEKYPPP 696
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN------ 485
EI R + + +L +K L I+ +++F F PP+ E L+ A E+L LGAL
Sbjct: 697 EITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQ 756
Query: 486 ---------LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
+TE+G M+ FP+ P+ +KML S ++ C ++I A ++V F +
Sbjct: 757 LQRSRLSCPITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELF-EELD 815
Query: 537 AQKAADEAKAR 547
A+DE AR
Sbjct: 816 RPAASDEELAR 826
Score = 87 (35.7 bits), Expect = 5.0e-74, Sum P(3) = 5.0e-74
Identities = 37/159 (23%), Positives = 69/159 (43%)
Query: 553 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNLKLCS 608
GD + LL A + P +C N + ++A+ +R QL + L +
Sbjct: 851 GDLMVLLGAVGACEYAGCSPQFCEANGLRYKAMMEIRRLRGQLTTAANTMCPEAGLFVDP 910
Query: 609 N-DFNSRDYYVNIRKAMLAGYFMQVAHLERT---------GQYLTVKDNQVVHLHPSNCL 658
+ D +R+ + AG +A ++ Y T + V +HPS+ L
Sbjct: 911 KMQPPNEDQVTYLRQIVTAGLGDHLARKVQSEDLVDDKWKNAYKTPLLDDPVFIHPSSVL 970
Query: 659 DHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 696
+ PE+V+Y E V T++ +++ V+ V +W+ + P Y
Sbjct: 971 FKELPEFVVYQEIVETTKMYMKGVSTVDMQWIPVLLPSY 1009
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 416 (151.5 bits), Expect = 4.5e-73, Sum P(3) = 4.5e-73
Identities = 96/254 (37%), Positives = 147/254 (57%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
E+ E+R LP+ +++ ++ + + ++I+ GETGSGKTTQ+PQF+ E + D
Sbjct: 238 EMQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAG--YSSDNS-- 293
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
+I T+P +EM+++ V Y IR+E + T +K++TDG+LL+E
Sbjct: 294 -IIGITEPRRVAAVAMSQRVAKEMNLS-QRVVSYQIRYEGNVTEETRIKFMTDGVLLKEI 351
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPDLKLVVMSATLEAEKF- 231
D LL RYKV+++DEAHER++ TD+L GLL ++ K LKL++MSATL E F
Sbjct: 352 QKDFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVEDFT 411
Query: 232 --QGYF-YGAPLMKVPGRLHPVEIFYTQE-PERDYLEAAIRTVVQIHMCEPSGDILVFLT 287
Q F P++KV R PV + + + P DY R V +IH P+G ILVFLT
Sbjct: 412 QNQRLFPQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLT 471
Query: 288 GEEEIEDACRKITK 301
G+ E+ CR++ +
Sbjct: 472 GQAEVHALCRRLRR 485
Score = 355 (130.0 bits), Expect = 4.5e-73, Sum P(3) = 4.5e-73
Identities = 92/247 (37%), Positives = 137/247 (55%)
Query: 312 PVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPG 371
P+ V+PLYS L P Q ++F+ R VV+TN+AETSLTI GI YV+D G
Sbjct: 581 PLHVLPLYSLLAPEKQAQVFQPPPEGT-------RLCVVATNVAETSLTIPGIKYVVDCG 633
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
K++ Y+ V S V+ +S+ASA QR+GRAGRT+PG C+RLY+ F+ D + P
Sbjct: 634 KVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFS-DFEQFPPP 692
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN------ 485
EI R + + +L +K L I+ +++F F PP+ E L+ A E+L LGAL
Sbjct: 693 EITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQ 752
Query: 486 ---------LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
+T +G M+ FP+ P+ +KML S ++ C ++I A ++V F +
Sbjct: 753 LQRSWLGCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELF-EELD 811
Query: 537 AQKAADE 543
A+DE
Sbjct: 812 RPAASDE 818
Score = 92 (37.4 bits), Expect = 4.5e-73, Sum P(3) = 4.5e-73
Identities = 36/159 (22%), Positives = 69/159 (43%)
Query: 553 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR----IMARFNLKLCS 608
GD + LL A + + P +C N + ++A+ +R QL + L +
Sbjct: 847 GDIMVLLGAVGACEYSGRSPQFCEANGLRYKAMMEIRRLRGQLTTAVNTVCPEAGLFMDP 906
Query: 609 N-DFNSRDYYVNIRKAMLAGYFMQVAHLERT---------GQYLTVKDNQVVHLHPSNCL 658
S +R+ + AG +A ++ Y T + V +HPS+ L
Sbjct: 907 KMQPPSESQVTYLRQIVAAGLGDHLARRVQSEDLLDDKWKNAYKTPLLDDPVFIHPSSVL 966
Query: 659 DHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 696
+ PE+V+Y E + T++ +++ V+ V +W+ + P Y
Sbjct: 967 FKELPEFVVYQEIMETTKMYMKGVSAVEVQWIPVLLPSY 1005
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 467 (169.5 bits), Expect = 3.4e-72, Sum P(2) = 3.4e-72
Identities = 140/471 (29%), Positives = 245/471 (52%)
Query: 257 EPERDYLEAAIRTVVQI-HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
+ E+ L+ + + I H C+ +G IL+FL G +EI +I + D +V
Sbjct: 615 DDEKVDLDLIMHLLYNICHSCD-AGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQV 673
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
L+S + + Q+K+ + RKI++STNIAETS+T++ +V+VID G K+
Sbjct: 674 FMLHSNMQTSDQKKVLKNPPAGV-------RKIILSTNIAETSITVNDVVFVIDSGKVKE 726
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
K ++ V L + ISKASA QR GRAGR +PG CFRL++ F N L+ QT PE+LR
Sbjct: 727 KSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLR 785
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEMG 490
L L K L + DF+ +PP P ++R A+++L + A+D +LTE+G
Sbjct: 786 MPLQELCLHTKLLAPVNCTIADFLMKAPEPP-PALIVRNAVQMLKTIDAMDAWEDLTELG 844
Query: 491 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARF 548
+++ P++P + KM++ + C + IL+I+ L+ + FV P +A ++AA + RF
Sbjct: 845 YHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRF 904
Query: 549 -GHIDGDHLTLLNVYHAYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVR------- 597
DH+ LL + A+++ D ++C NF++ ++ +R QL+
Sbjct: 905 TAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGF 964
Query: 598 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC 657
+ AR + + NS ++ V ++ A++AG + + H++R LT + V HP++
Sbjct: 965 VRARGGGDIRDVNTNSENWAV-VKAALVAGMYPNLVHVDRENVILTGPKEKKVRFHPTSV 1023
Query: 658 LDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI-DIAPHYYDLSNFPQCEA 707
L +P++ + + + + + +WLI D + ++N C A
Sbjct: 1024 LS-QPQY----KKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSA 1069
Score = 339 (124.4 bits), Expect = 3.4e-72, Sum P(2) = 3.4e-72
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE-TPDRRRKMMIA 120
R+SLPV++++EE ++++K N+V+++VGETGSGKTTQIPQF+L+ P R I
Sbjct: 205 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-----IF 259
Query: 121 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMT-D 179
CTQP E IG+ +GY IR E S +T+L + T+G+LLR M D
Sbjct: 260 CTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGD 319
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
L +++DE HER +D L L+++L+ P LKL++ SA L+ F YF P
Sbjct: 320 STLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCP 379
Query: 240 LMKVPGRLHPVEI 252
++ + GR P E+
Sbjct: 380 VIYIQGR--PFEV 390
Score = 37 (18.1 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 86 LVGETGSGKTTQIPQFVLEGVDIET 110
L+ G G T+Q+ Q + G ++ +
Sbjct: 526 LMVAAGRGFTSQVEQLISMGANVHS 550
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 142/281 (50%), Positives = 197/281 (70%)
Query: 52 SQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETP 111
+Q+ I R+SLPV+ +EE L + +QV+I+ GETGSGKTTQIPQ++ E + T
Sbjct: 386 AQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFE--EGYT- 442
Query: 112 DRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGM 171
+ M IACTQP EM V +G EVGYSIRFEDC+S RTVL+Y+TDGM
Sbjct: 443 --NKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGM 500
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SAT++ +F
Sbjct: 501 LLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARF 560
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
+F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EE
Sbjct: 561 STFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEE 620
Query: 292 IEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFE 332
IE AC + +G ++ + V+P+Y+ LP MQ +IF+
Sbjct: 621 IEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQ 661
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 465 (168.7 bits), Expect = 6.1e-72, Sum P(2) = 6.1e-72
Identities = 139/471 (29%), Positives = 245/471 (52%)
Query: 257 EPERDYLEAAIRTVVQI-HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
+ E+ L+ + + I H C+ +G +L+FL G +EI +I + D +V
Sbjct: 600 DDEKVDLDLIMHLLYNICHSCD-AGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQV 658
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
L+S + + Q+K+ + RKI++STNIAETS+T++ +V+VID G K+
Sbjct: 659 FMLHSNMQTSDQKKVLKNPPAGV-------RKIILSTNIAETSITVNDVVFVIDSGKVKE 711
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
K ++ V L + ISKASA QR GRAGR +PG CFRL++ F N L+ QT PE+LR
Sbjct: 712 KSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLR 770
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEMG 490
L L K L + DF+ +PP P ++R A+++L + A+D +LTE+G
Sbjct: 771 MPLQELCLHTKLLAPVNCPIADFLMKAPEPP-PALIVRNAVQMLKTIDAMDTWEDLTELG 829
Query: 491 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARF 548
+++ P++P + KM++ + C + IL+I+ L+ + FV P +A ++AA + RF
Sbjct: 830 YHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRF 889
Query: 549 -GHIDGDHLTLLNVYHAYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVR------- 597
DH+ LL + A+++ D ++C NF++ ++ +R QL+
Sbjct: 890 TAGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGF 949
Query: 598 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC 657
+ AR + + NS ++ V ++ A++AG + + H++R LT + V HP++
Sbjct: 950 VRARGGGDIRDVNTNSENWAV-VKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPASV 1008
Query: 658 LDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI-DIAPHYYDLSNFPQCEA 707
L +P++ + + + + + +WLI D + ++N C A
Sbjct: 1009 LS-QPQY----KKIPPANGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSA 1054
Score = 339 (124.4 bits), Expect = 6.1e-72, Sum P(2) = 6.1e-72
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE-TPDRRRKMMIA 120
R+SLPV++++EE ++++K N+V+++VGETGSGKTTQIPQF+L+ P R I
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-----IF 244
Query: 121 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMT-D 179
CTQP E IG+ +GY IR E S +T+L + T+G+LLR M D
Sbjct: 245 CTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGD 304
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
L +++DE HER +D L L+++L+ P LKL++ SA L+ F YF P
Sbjct: 305 STLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCP 364
Query: 240 LMKVPGRLHPVEI 252
++ + GR P E+
Sbjct: 365 VIYIQGR--PFEV 375
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 417 (151.9 bits), Expect = 7.5e-72, Sum P(3) = 7.5e-72
Identities = 91/263 (34%), Positives = 155/263 (58%)
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL+ + +SKASA QR GRAG
Sbjct: 924 RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAG 983
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPA 463
R + G CFRLYT + F L+ + PEILR L L + K + F +DPP
Sbjct: 984 RVRDGFCFRLYTRERFEGFLE-YSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQ 1042
Query: 464 PETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
P+ + A+ +L +GA + + LT +G+ ++ P++ ++ KML+ + C + +++
Sbjct: 1043 PQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLA 1102
Query: 523 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP------SWCY 576
A+++ + F+ P + AD AK+ D DHLT+ N Y +K+ ++ S+C
Sbjct: 1103 AVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQ 1162
Query: 577 DNFVNHRALKSADNVRQQLVRIM 599
NF+N +L + ++V+Q+L++++
Sbjct: 1163 RNFLNRTSLLTLEDVKQELMKLV 1185
Score = 396 (144.5 bits), Expect = 7.5e-72, Sum P(3) = 7.5e-72
Identities = 89/251 (35%), Positives = 143/251 (56%)
Query: 13 DVVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKE 72
++V + +SA ++ G + N L R P +Y +L++R+ LPV++ +
Sbjct: 526 NLVSDEDLSALSLEPTGAEDLEPVRN---LFRRLQSTP---KYQRLLKERQQLPVFKHRA 579
Query: 73 EFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPD-RRRKMMIACTQPXXXXXXX 131
++ LK ++V+++ GETGSGK+TQ+P F+LE D+ D RK I CTQP
Sbjct: 580 SIVETLKRHRVVVVAGETGSGKSTQVPHFLLE--DLLLNDCGARKCNIVCTQPRRISAVS 637
Query: 132 XXXXXXEEMDVTIGEE-----VGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYK 186
EE+ G GY IR E +S T L Y T G+LLR+ D LL
Sbjct: 638 LATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADVS 697
Query: 187 VIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGR 246
+++DE HER++ +D L +LKE+L+ R DL L++MSAT++++KF YF P++++ GR
Sbjct: 698 HVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGR 757
Query: 247 LHPVEIFYTQE 257
+PVE+F+ ++
Sbjct: 758 SYPVEVFHLED 768
Score = 42 (19.8 bits), Expect = 7.5e-72, Sum P(3) = 7.5e-72
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 652 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 682
+HPS+ D + W++Y E V +R ++R T
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKVRYARVYLRETT 1285
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 461 (167.3 bits), Expect = 2.1e-71, Sum P(2) = 2.1e-71
Identities = 139/471 (29%), Positives = 244/471 (51%)
Query: 257 EPERDYLEAAIRTVVQI-HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
+ E+ L+ + + I H CE +G IL+FL G +EI +I + + +V
Sbjct: 599 DDEKVDLDLIMHLLYNICHSCE-AGAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQV 657
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
L+S + + Q+K+ + RKI++STNIAETS+T++ +V+VID G K+
Sbjct: 658 FMLHSNMQTSDQKKVLKNPPAGV-------RKIILSTNIAETSITVNDVVFVIDSGKVKE 710
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
K ++ V L + ISKASA QR GRAGR +PG CFRL++ F N L+ QT PE+LR
Sbjct: 711 KSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLR 769
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEMG 490
L L K L + DF+ +PP P ++R A+++L + A+D +LTE+G
Sbjct: 770 MPLQELCLHTKLLAPVNCAIADFLMKAPEPP-PALIVRNAVQMLKTIDAMDAWEDLTELG 828
Query: 491 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARF 548
+++ P++P + KM++ + C + IL+I+ L+ + FV P +A ++AA + RF
Sbjct: 829 YHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRF 888
Query: 549 -GHIDGDHLTLLNVYHAYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVR------- 597
DH+ LL + A+++ D ++C NF++ ++ +R QL+
Sbjct: 889 TAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGF 948
Query: 598 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC 657
+ AR + + NS ++ V ++ A++AG + + H++R L + V HP++
Sbjct: 949 VRARGGGDIRDVNTNSENWAV-VKAALVAGMYPHLVHVDRENVVLAGPKEKKVRFHPTSV 1007
Query: 658 LDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI-DIAPHYYDLSNFPQCEA 707
L +P++ + + + + + +WLI D + ++N C A
Sbjct: 1008 LS-QPQY----KKIPPANGQTAAIQALPTDWLIYDEMTRAHRIANIRCCSA 1053
Score = 339 (124.4 bits), Expect = 2.1e-71, Sum P(2) = 2.1e-71
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE-TPDRRRKMMIA 120
R+SLPV++++EE ++++K N+V+++VGETGSGKTTQIPQF+L+ P R I
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-----IF 243
Query: 121 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMT-D 179
CTQP E IG+ +GY IR E S +T+L + T+G+LLR M D
Sbjct: 244 CTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGD 303
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
L +++DE HER +D L L+++L+ P LKL++ SA L+ F YF P
Sbjct: 304 STLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCP 363
Query: 240 LMKVPGRLHPVEI 252
++ + GR P E+
Sbjct: 364 VIYIQGR--PFEV 374
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 408 (148.7 bits), Expect = 2.2e-71, Sum P(3) = 2.2e-71
Identities = 102/329 (31%), Positives = 177/329 (53%)
Query: 280 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 339
G +L+FL G I+ ++ + ++ +V+ L+S L Q F
Sbjct: 867 GAVLIFLPGLAHIQQLYDLLSSDRRFYSERY---QVIALHSVLSTQDQAAAF-------M 916
Query: 340 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 399
RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL+ + +SKASA Q
Sbjct: 917 FPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQ 976
Query: 400 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 457
R GRAGR + G CFRLYT + F L + PEILR L L + K + F
Sbjct: 977 RQGRAGRVRDGFCFRLYTRERFEGFLD-YSVPEILRVPLEELCLHIMKCDLGSPEDFLSK 1035
Query: 458 FMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
+DPP + + A+ +L +GA + ++ LT +G+ ++ P++ ++ KML+ + C
Sbjct: 1036 ALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLE 1095
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP---- 572
+ +++A+++ + F+ P + AD AK+ D DHLT+ N Y +K+ ++
Sbjct: 1096 PVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRS 1155
Query: 573 --SWCYDNFVNHRALKSADNVRQQLVRIM 599
S+C NF+N +L + ++V+Q+L++++
Sbjct: 1156 EISYCQRNFLNRTSLLTLEDVKQELMKLV 1184
Score = 402 (146.6 bits), Expect = 2.2e-71, Sum P(3) = 2.2e-71
Identities = 83/222 (37%), Positives = 133/222 (59%)
Query: 41 SLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQ 100
SL R P +Y +L++R+ LPV++ ++ ++ LK ++V+++ GETGSGK+TQ+P
Sbjct: 550 SLFRRLQSTP---KYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPH 606
Query: 101 FVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE-----VGYSIRFE 155
F+LE + ++ R K I CTQP EE+ G GY IR E
Sbjct: 607 FLLEDLLLDECGAR-KCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRME 665
Query: 156 DCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP 215
+S T L Y T G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R
Sbjct: 666 SRASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRS 725
Query: 216 DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
DL L++MSAT++++KF YF P++++ GR +PVE+F+ ++
Sbjct: 726 DLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLED 767
Score = 42 (19.8 bits), Expect = 2.2e-71, Sum P(3) = 2.2e-71
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 652 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 682
+HPS+ D + W++Y E V +R ++R T
Sbjct: 1252 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETT 1284
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 455 (165.2 bits), Expect = 3.5e-71, Sum P(2) = 3.5e-71
Identities = 126/423 (29%), Positives = 217/423 (51%)
Query: 229 EKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTG 288
E++ GY + VE+ ++ + + + A IR +V + E G ILVFL G
Sbjct: 443 ERWPGYLRELRQRYSASTVDVVEMMDDEKVDLNLIAALIRYIV---LEEEDGAILVFLPG 499
Query: 289 EEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKI 348
+ I + ++ D+ ++PL+S +P Q ++F+ RKI
Sbjct: 500 WDNISTLHDLLMSQVMFKSDKF---IIIPLHSLMPTVNQTQVFKRTPPGV-------RKI 549
Query: 349 VVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQ 408
V++TNIAETS+TID +VYVID G K+ ++ + + ++ +SKA+A QR GRAGR Q
Sbjct: 550 VIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQ 609
Query: 409 PGKCFRLYTE--KSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAP 464
PG C+ LY S +D Q PEILR+ L L +K L + + HF MDPP+
Sbjct: 610 PGHCYHLYNSLRASLLDDYQ---LPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSN 666
Query: 465 ETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 524
E ++ +++ L L ALD LT +G ++ P++P + KM++ + C + +L+I+A
Sbjct: 667 EAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 726
Query: 525 LSVPNCFVRPREAQKAADEAKARFGH-IDGDHLTLLNVYHAYKQNNE-----DPSWCYDN 578
LS + FV P +K AD + DHLT++N + +++ + + +C++
Sbjct: 727 LSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEKDYCWEY 786
Query: 579 FVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAMLAGYFMQV 632
F++ L+ N++ Q + A F N + ++ NS + + I+ + AG + +V
Sbjct: 787 FLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKI-IKAVICAGLYPKV 845
Query: 633 AHL 635
A +
Sbjct: 846 AKI 848
Score = 338 (124.0 bits), Expect = 3.5e-71, Sum P(2) = 3.5e-71
Identities = 89/254 (35%), Positives = 130/254 (51%)
Query: 1 MGTERKRKVSLFD-VVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEIL 59
M + KR + D +D S L++ N P A ++ L+ K RY E+
Sbjct: 150 MINQEKRPFRIRDKYIDRDS--EYLLQENE--PDATLDQQ--LLEDLQKKKTDLRYIEMQ 203
Query: 60 EKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMI 119
R+ LP + ++E + ++ +QV ++ GETG GKTTQ+ QF+L+ IE + I
Sbjct: 204 RFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNY-IER-GKGSACRI 261
Query: 120 ACTQPXXXXXXXXXXXXXEEMDVTIGE--EVGYSIRFED-CSSARTVLKYLTDGMLLREA 176
CTQP E + G GY IR + + + Y T G++L+
Sbjct: 262 VCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 321
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 236
+DP L IVLDE HER L +DVL ++K++L RPDLK+V+MSATL AEKF YF
Sbjct: 322 QSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFG 381
Query: 237 GAPLMKVPGRLHPV 250
P++ +PG PV
Sbjct: 382 NCPMIHIPGFTFPV 395
Score = 63 (27.2 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 571 DPSWCYDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAM 624
+ +C++ F++ L+ N++ Q + A F N + ++ NS + + I+ +
Sbjct: 779 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKI-IKAVI 837
Query: 625 LAGYFMQVA----HLERTGQYLTV--KDNQVVHLHPSNCLDHKPE----WVIYNEYVLTS 674
AG + +VA +L + + + V K + VV +HP + + E W+IY+ + TS
Sbjct: 838 CAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEFNYNWLIYHLKMRTS 897
Query: 675 RNFIRTVTDV 684
++ T+V
Sbjct: 898 SIYLYDCTEV 907
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 417 (151.9 bits), Expect = 6.7e-71, Sum P(3) = 6.7e-71
Identities = 111/361 (30%), Positives = 191/361 (52%)
Query: 262 YLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYST 321
YLE R+ Q E G +L+FL G I+ ++ + ++ KV+ L+S
Sbjct: 853 YLEIPDRSP-QFRNIE--GAVLIFLPGLAHIQQLYDLLSTDRRFFSERY---KVIALHSI 906
Query: 322 LPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR 381
L Q F RKIV++TNIAET +TI +V+VID G K+ Y+
Sbjct: 907 LSTQDQAAAF-------TLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 382 VRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANT 441
++ SL+ + +SKASA QR GRAGR + G CFR+YT + F + + PEILR L
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEEL 1018
Query: 442 VLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPL 498
L + K + F +DPP + + A+ +L +GA + ++ LT +G+ ++ P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPV 1078
Query: 499 DPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTL 558
+ ++ KML+ + C + + +++A+++ + F P + AD AK+ D DHLT+
Sbjct: 1079 NVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTI 1138
Query: 559 LNVYHAYKQNNEDP------SWCYDNFVNHRALKSADNVRQQLVRIM--ARFNLKLCSND 610
N Y +K+ ++ ++C NF+N +L + ++V+Q+L++++ A F+ SND
Sbjct: 1139 YNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSND 1198
Query: 611 F 611
+
Sbjct: 1199 W 1199
Score = 387 (141.3 bits), Expect = 6.7e-71, Sum P(3) = 6.7e-71
Identities = 78/209 (37%), Positives = 126/209 (60%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
+Y +L++R+ LPV++ + ++ LK ++V+++ GETGSGK+TQ+P F+LE + +
Sbjct: 558 KYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGT 617
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE-----VGYSIRFEDCSSARTVLKYLT 168
K I CTQP +E+ G GY IR E +S T L Y T
Sbjct: 618 S-KCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCT 676
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT+++
Sbjct: 677 TGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDS 736
Query: 229 EKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
EKF YF P++++ GR +PVE+F+ ++
Sbjct: 737 EKFSTYFTHCPILRISGRSYPVEVFHLED 765
Score = 42 (19.8 bits), Expect = 6.7e-71, Sum P(3) = 6.7e-71
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 652 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 682
+HPS+ D + W++Y E V +R ++R T
Sbjct: 1256 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETT 1288
Score = 38 (18.4 bits), Expect = 6.8e-31, Sum P(3) = 6.8e-31
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 274
GA L+ +PG H +++ +R + + V+ +H
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK-VIALH 904
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 450 (163.5 bits), Expect = 7.9e-71, Sum P(3) = 7.9e-71
Identities = 118/381 (30%), Positives = 197/381 (51%)
Query: 245 GRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEIT 304
G + +E+ + + D + A IR +V + E G ILVFL G + I + ++
Sbjct: 438 GTIDALEMMDDDKVDLDLIAALIRHIV---LEEEDGAILVFLPGWDNISTLHDLLMSQVM 494
Query: 305 NMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGI 364
D+ ++PL+S +P Q ++F+ RKIV++TNIAETS+TID +
Sbjct: 495 FKSDRF---IIIPLHSLMPTVNQTQVFKKTPPGV-------RKIVIATNIAETSITIDDV 544
Query: 365 VYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT--EKSFN 422
V+VID G K+ ++ + + ++ +SKA+A QR GRAGR QPG C+ LY S
Sbjct: 545 VFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLL 604
Query: 423 NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGAL 480
+D Q PEILR+ L L +K L + + +F MDPP+ + +M A+ L L AL
Sbjct: 605 DDYQ---LPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNAL 661
Query: 481 DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKA 540
D LT +G ++ P++P + KM++ + C + +L+I+A LS + FV P +K
Sbjct: 662 DRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKV 721
Query: 541 ADEAKARFG-HIDGDHLTLLNVYHAYKQNNE-----DPSWCYDNFVNHRALKSADNVRQQ 594
AD + + DHLT++N + +++ + +C++ F++ L+ N++ Q
Sbjct: 722 ADARRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQ 781
Query: 595 LVRIMARFNLKLCSNDFNSRD 615
+ L + NSRD
Sbjct: 782 FAEHL------LAAGFVNSRD 796
Score = 322 (118.4 bits), Expect = 7.9e-71, Sum P(3) = 7.9e-71
Identities = 76/207 (36%), Positives = 111/207 (53%)
Query: 49 KPYSQRYYEILEKRKSLPVW--QQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGV 106
K RY E+ R+ LP + +QK+E + ++ N+V ++ GETG GKTTQ+ QF+L+
Sbjct: 170 KKSDPRYIEMQRFREKLPSYGMRQKQELVNLINNNRVTVISGETGCGKTTQVTQFILDDY 229
Query: 107 DIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIG--EEVGYSIRFED-CSSARTV 163
IE + I CTQP E G + GY IR + +
Sbjct: 230 -IER-GKGSTCRIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGS 287
Query: 164 LKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMS 223
+ Y T G++L+ +D L +VLDE HER L +DVL ++K++L R DLK+++MS
Sbjct: 288 ILYCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMS 347
Query: 224 ATLEAEKFQGYFYGAPLMKVPGRLHPV 250
ATL AEKF YF P++ +PG PV
Sbjct: 348 ATLNAEKFSEYFDNCPMIHIPGFTFPV 374
Score = 58 (25.5 bits), Expect = 7.9e-71, Sum P(3) = 7.9e-71
Identities = 28/129 (21%), Positives = 58/129 (44%)
Query: 571 DPSWCYDNFVNHRALKSADNVRQQLVR--IMARFNLKLCSNDFNSRDYYVN--IRKAML- 625
+ +C++ F++ L+ N++ Q + A F D S N + KA++
Sbjct: 758 EKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVIC 817
Query: 626 AGYFMQVAHL------ERTGQYLTVKDNQVVHLHPSNCLDHKPE----WVIYNEYVLTSR 675
AG + +VA + +R + K + V++HP + + E W++Y+ + TS
Sbjct: 818 AGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSS 877
Query: 676 NFIRTVTDV 684
++ T+V
Sbjct: 878 IYLYDCTEV 886
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 425 (154.7 bits), Expect = 9.5e-71, Sum P(3) = 9.5e-71
Identities = 96/256 (37%), Positives = 143/256 (55%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
R E+ R LP+ ++++ ++ + N ++I+ GETGSGKTTQ+PQF+ E
Sbjct: 249 RTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEA------GY 302
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLL 173
+ MI T+P EM++ EV Y IRFE + T +K++TDG+LL
Sbjct: 303 AQHKMIGVTEPRRVAAIAMSKRVAHEMNLP-ESEVSYLIRFEGNVTPATRIKFMTDGVLL 361
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPDLKLVVMSATLEAE 229
+E TD LL +Y VI+LDEAHER++ TD+L GLL ++ K LKL++MSATL
Sbjct: 362 KEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVS 421
Query: 230 KFQG----YFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVF 285
F + PL+KV R PV I + + DY+ A R ++IH P G IL+F
Sbjct: 422 DFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIF 481
Query: 286 LTGEEEIEDACRKITK 301
+TG++E+ RK+ +
Sbjct: 482 VTGQQEVNQLVRKLRR 497
Score = 329 (120.9 bits), Expect = 9.5e-71, Sum P(3) = 9.5e-71
Identities = 93/254 (36%), Positives = 134/254 (52%)
Query: 288 GEEEIEDACRKITKEITNMGD-QVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXR 346
G EE D + E + MG Q P+ V+PLYS L Q +IF R
Sbjct: 592 GLEEDNDDELGLEDE-SGMGSGQRQPLWVLPLYSLLSSEKQNRIF-------LPVPDGCR 643
Query: 347 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGR 406
VVSTN+AETSLTI I YV+D G K ++Y+ V + +V+ SKASA QR+GRAGR
Sbjct: 644 LCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGR 703
Query: 407 TQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPET 466
G C+RLY+ +N+ + + P+I + + + +L ++ +GID +VHF F PP
Sbjct: 704 ISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQ 763
Query: 467 LMRALEVLNYLGALD----DDGNL----TEMGEKMSEFPLDPQMSKMLVESPKYNCSNEI 518
L A L LGAL+ ++ +L T +G +S FP+ P+ KML S + N
Sbjct: 764 LQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYT 823
Query: 519 LSISAMLSVPNCFV 532
+ + A LSV +
Sbjct: 824 VCLVAALSVQEVLI 837
Score = 86 (35.3 bits), Expect = 9.5e-71, Sum P(3) = 9.5e-71
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 652 LHPSNCLDHK-PEWVIYNE-YVL----TSRNFIRTVTDVRGEWLIDIAP 694
LH S+ L K PEWVIY E Y L +++ FIR +T + EWL+ P
Sbjct: 991 LHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVP 1039
Score = 44 (20.5 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 511 KY--NCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN 568
KY +C + + L+ + FV ++ +AD+ R G I H L Y
Sbjct: 662 KYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDC 721
Query: 569 NED 571
ED
Sbjct: 722 FED 724
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 415 (151.1 bits), Expect = 1.2e-70, Sum P(3) = 1.2e-70
Identities = 105/343 (30%), Positives = 184/343 (53%)
Query: 280 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 339
G +L+FL G I+ ++ + ++ KV+ L+S L Q F
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERY---KVIALHSILSTQDQAAAF-------T 914
Query: 340 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 399
RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL+ + +SKASA Q
Sbjct: 915 LPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQ 974
Query: 400 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 457
R GRAGR + G CFR+YT + F + + PEILR L L + K + F
Sbjct: 975 RQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLSK 1033
Query: 458 FMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
+DPP + + A+ +L +GA + ++ LT +G+ ++ P++ ++ KML+ + C +
Sbjct: 1034 ALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLD 1093
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP---- 572
+ +++A+++ + F P + AD AK+ D DHLT+ N Y +K+ ++
Sbjct: 1094 PVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRS 1153
Query: 573 --SWCYDNFVNHRALKSADNVRQQLVRIM--ARFNLKLCSNDF 611
++C NF+N +L + ++V+Q+L++++ A F+ SND+
Sbjct: 1154 EIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSNDW 1196
Score = 387 (141.3 bits), Expect = 1.2e-70, Sum P(3) = 1.2e-70
Identities = 78/209 (37%), Positives = 126/209 (60%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
+Y +L++R+ LPV++ + ++ LK ++V+++ GETGSGK+TQ+P F+LE + +
Sbjct: 558 KYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGT 617
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE-----VGYSIRFEDCSSARTVLKYLT 168
K I CTQP +E+ G GY IR E +S T L Y T
Sbjct: 618 S-KCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCT 676
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT+++
Sbjct: 677 TGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDS 736
Query: 229 EKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
EKF YF P++++ GR +PVE+F+ ++
Sbjct: 737 EKFSTYFTHCPILRISGRSYPVEVFHLED 765
Score = 42 (19.8 bits), Expect = 1.2e-70, Sum P(3) = 1.2e-70
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 652 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 682
+HPS+ D + W++Y E V +R ++R T
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETT 1285
Score = 38 (18.4 bits), Expect = 6.8e-31, Sum P(3) = 6.8e-31
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 274
GA L+ +PG H +++ +R + + V+ +H
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK-VIALH 901
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 461 (167.3 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 134/448 (29%), Positives = 227/448 (50%)
Query: 263 LEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTL 322
+ A IR +V + E G ILVFL G + I + ++ D+ ++PL+S +
Sbjct: 468 IAALIRYIV---LEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKF---LIIPLHSLM 521
Query: 323 PPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRV 382
P Q ++F+ RKIV++TNIAETS+TID +VYVID G K+ ++ +
Sbjct: 522 PTVNQTQVFKKTPPGV-------RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQN 574
Query: 383 RVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT--EKSFNNDLQPQTYPEILRSNLAN 440
+ ++ +SKA+A QR GRAGR QPG C+ LY S +D Q PEILR+ L
Sbjct: 575 NISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ---LPEILRTPLEE 631
Query: 441 TVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPL 498
L +K L + + +F MDPP+ E ++ +++ L L ALD LT +G ++ P+
Sbjct: 632 LCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPV 691
Query: 499 DPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFG-HIDGDHLT 557
+P + KM++ + C + +L+I+A LS + FV P +K AD + DHLT
Sbjct: 692 EPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLT 751
Query: 558 LLNVYHAYKQNNE-----DPSWCYDNFVNHRALKSADNVRQQLVRIM--ARFNLKLCSND 610
++N + +++ + +C++ F++ L+ N++ Q + A F D
Sbjct: 752 VVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKD 811
Query: 611 ----FNSRDYYVNIRKAMLAGYFMQVA----HLERTGQYLTV--KDNQVVHLHPSNC--- 657
NS + + I+ + AG + +VA +L + + + V K + +V +HP +
Sbjct: 812 PKANINSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVE 870
Query: 658 -LDHKPEWVIYNEYVLTSRNFIRTVTDV 684
D W+IY+ + TS ++ T+V
Sbjct: 871 QTDFHYNWLIYHLKMRTSSIYLYDCTEV 898
Score = 325 (119.5 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 76/205 (37%), Positives = 109/205 (53%)
Query: 49 KPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDI 108
K RY E+ RK LP + ++E + ++ +QV ++ GETG GKTTQ+ QF+L+ I
Sbjct: 184 KKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNY-I 242
Query: 109 ETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGE--EVGYSIRFED-CSSARTVLK 165
E + I CTQP E + G GY IR + + +
Sbjct: 243 ER-GKGSACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSIL 301
Query: 166 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
Y T G++L+ +D L IVLDE HER L +DVL ++K++L R DLK+++MSAT
Sbjct: 302 YCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSAT 361
Query: 226 LEAEKFQGYFYGAPLMKVPGRLHPV 250
L AEKF YF P++ +PG PV
Sbjct: 362 LNAEKFSEYFGNCPMIHIPGFTFPV 386
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 464 (168.4 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 135/461 (29%), Positives = 233/461 (50%)
Query: 250 VEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQ 309
+E+ + + + + A IR +V + E G ILVFL G + I + ++ D+
Sbjct: 454 LEMMDDDKVDLNLIAALIRYIV---LEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDR 510
Query: 310 VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVID 369
++PL+S +P Q ++F+ RKIV++TNIAETS+TID +VYVID
Sbjct: 511 F---LIIPLHSLMPTVNQTQVFKKTPPGV-------RKIVIATNIAETSITIDDVVYVID 560
Query: 370 PGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT--EKSFNNDLQP 427
G K+ ++ + + ++ +SKA+A QR GRAGR QPG C+ LY S +D Q
Sbjct: 561 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ- 619
Query: 428 QTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGN 485
PEILR+ L L +K L + + +F MDPP+ E ++ +++ L L ALD
Sbjct: 620 --LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEE 677
Query: 486 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAK 545
LT +G ++ P++P + KM++ + C + +L+I+A LS + FV P +K AD +
Sbjct: 678 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 737
Query: 546 ARFG-HIDGDHLTLLNVYHAYKQNNE-----DPSWCYDNFVNHRALKSADNVRQQLVRIM 599
DHLT++N + +++ + +C++ F++ L+ N++ Q +
Sbjct: 738 KELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 797
Query: 600 --ARFNLKLCSND----FNSRDYYVNIRKAMLAGYFMQVA----HLERTGQYLTV--KDN 647
A F D NS + + I+ + AG + +VA +L + + + V K +
Sbjct: 798 LGAGFVSSRSPKDPKANINSDNEKI-IKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSD 856
Query: 648 QVVHLHPSNC----LDHKPEWVIYNEYVLTSRNFIRTVTDV 684
+V +HP + D W+IY+ + TS ++ T+V
Sbjct: 857 GLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEV 897
Score = 321 (118.1 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 77/215 (35%), Positives = 111/215 (51%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ L+ K RY E+ RK LP + ++E + ++ +QV ++ GETG GKTTQ+
Sbjct: 173 DQQLLEDLQKKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQV 232
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGE--EVGYSIRFED 156
QF+L+ IE I CTQP E + G GY IR +
Sbjct: 233 TQFILDNY-IER-GIGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQS 290
Query: 157 -CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP 215
+ + Y T G++L+ +D L IVLDE HER L +DVL ++K++L R
Sbjct: 291 RLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRS 350
Query: 216 DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPV 250
DLK+++MSATL AEKF YF P++ +PG PV
Sbjct: 351 DLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 385
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 417 (151.9 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 105/343 (30%), Positives = 183/343 (53%)
Query: 280 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 339
G +L+FL G I+ ++ + ++ KV+ L+S L Q F
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERY---KVIALHSILSTQDQAAAF-------T 914
Query: 340 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 399
RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL+ + +SKASA Q
Sbjct: 915 LPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQ 974
Query: 400 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 457
R GRAGR + G CFR+YT + F + + PEILR L L + K + F
Sbjct: 975 RQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLSK 1033
Query: 458 FMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
+DPP + + A+ +L +GA + ++ LT +G+ ++ P++ ++ KML+ + C +
Sbjct: 1034 ALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLD 1093
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP---- 572
+ +++A+++ + F+ P + AD AK+ D DHLT+ N Y +K+ ++
Sbjct: 1094 PVATLAAVMTEKSPFITPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRS 1153
Query: 573 --SWCYDNFVNHRALKSADNVRQQLVRIM--ARFNLKLCSNDF 611
++C NF+N +L + ++V+Q+L++++ A F SN F
Sbjct: 1154 EIAYCRKNFLNRTSLLTLEDVKQELIKLVKAAGFLSSTTSNSF 1196
Score = 385 (140.6 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 78/209 (37%), Positives = 125/209 (59%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
+Y +L++R+ LPV++ + ++ LK ++V+++ GETGSGK+TQ+P F+LE + +
Sbjct: 558 KYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGT 617
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE-----VGYSIRFEDCSSARTVLKYLT 168
K I CTQP +E+ G GY IR E +S T L Y T
Sbjct: 618 T-KCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCT 676
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT++
Sbjct: 677 TGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDC 736
Query: 229 EKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
EKF YF P++++ GR +PVE+F+ ++
Sbjct: 737 EKFSTYFTHCPILRISGRSYPVEVFHLED 765
Score = 40 (19.1 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 664 WVIYNEYVLTSRNFIRTVT 682
W++Y E + +R ++R T
Sbjct: 1267 WLLYQEKIRYARVYLRETT 1285
Score = 40 (19.1 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 13/59 (22%), Positives = 29/59 (49%)
Query: 216 DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 274
DL L +++ + +F+ GA L+ +PG H +++ +R + + V+ +H
Sbjct: 845 DLILELLTYLDRSPQFKNV-EGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK-VIALH 901
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 409 (149.0 bits), Expect = 1.9e-70, Sum P(3) = 1.9e-70
Identities = 82/211 (38%), Positives = 127/211 (60%)
Query: 52 SQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETP 111
S RY + L++R+ LPV++ + ++ LK ++V+++ GETGSGK+TQ+P F+LE D+
Sbjct: 561 SSRYQKFLKERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLE--DLLLD 618
Query: 112 DRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE-----VGYSIRFEDCSSARTVLKY 166
+ RK I CTQP EE+ G GY IR E + T L Y
Sbjct: 619 EGTRKCNIVCTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLY 678
Query: 167 LTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATL 226
T G+LLR+ D LL +++DE HER++ +D L +LKE+L R DL L++MSAT+
Sbjct: 679 CTTGVLLRKLQEDGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATV 738
Query: 227 EAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
++EKF YF P++++ GR +PVE+F+ ++
Sbjct: 739 DSEKFSSYFAHCPILRISGRSYPVEVFHVED 769
Score = 392 (143.0 bits), Expect = 1.9e-70, Sum P(3) = 1.9e-70
Identities = 101/330 (30%), Positives = 177/330 (53%)
Query: 280 GDILVFLTGEEEIEDACRKI-TKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXX 338
G +L+FL G I+ I T ++ D+ +++ L+S L Q F
Sbjct: 869 GAVLIFLPGLAHIQQLYDLISTDRRFSLCDRH---RLIALHSVLSTQDQAAAF------- 918
Query: 339 XXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAH 398
RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL + +SKASA
Sbjct: 919 TVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASAL 978
Query: 399 QRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF-- 456
QR GRAGR + G CFR+YT F + ++ + PEILR L L + K + F
Sbjct: 979 QRQGRAGRVRDGFCFRMYTRDRFESFME-YSVPEILRVPLEELCLHIMKCNLGSPEDFLS 1037
Query: 457 DFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCS 515
+DPP P+ + A+ +L +GA ++ LT +G+ ++ P++ ++ KML+ + C
Sbjct: 1038 RALDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCL 1097
Query: 516 NEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP--- 572
+ + +++A+++ + F P + AD AK+ DHLT+ N Y +K+ ++
Sbjct: 1098 DPVATLAAVMTEKSPFTTPIGRKDEADLAKSSIALAVSDHLTIYNAYLGWKKARQEGGHR 1157
Query: 573 ---SWCYDNFVNHRALKSADNVRQQLVRIM 599
++C NF+N +L + ++V+Q+L++++
Sbjct: 1158 AEMTYCRRNFLNRTSLLTLEDVKQELIKLV 1187
Score = 42 (19.8 bits), Expect = 1.9e-70, Sum P(3) = 1.9e-70
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 617 YVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC-LDHKPE-WVIYNEYVLTS 674
Y N+ K M Y V E+ + + +HPS+ D + W++Y E V +
Sbjct: 1227 YDNVGKIM---YTKSVDITEKLACLVETAQGKA-QVHPSSVNRDLQVHGWLLYQEKVRYA 1282
Query: 675 RNFIRTVT 682
+ ++R T
Sbjct: 1283 KVYLRETT 1290
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 448 (162.8 bits), Expect = 5.2e-70, Sum P(2) = 5.2e-70
Identities = 121/402 (30%), Positives = 206/402 (51%)
Query: 250 VEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQ 309
V++ E ++ L + + I + E G ILVFL G + I + ++ D+
Sbjct: 373 VDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDK 432
Query: 310 VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVID 369
++PL+S +P Q ++F+ RKIV++TNIAETS+TID +VYVID
Sbjct: 433 F---LIIPLHSLMPTVNQTQVFKRTPPGV-------RKIVIATNIAETSITIDDVVYVID 482
Query: 370 PGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT--EKSFNNDLQP 427
G K+ ++ + + ++ +SKA+A QR GRAGR QPG C+ LY S +D Q
Sbjct: 483 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ- 541
Query: 428 QTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGN 485
PEILR+ L L +K L + + +F MDPP+ E ++ ++ L L ALD
Sbjct: 542 --LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEE 599
Query: 486 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAK 545
LT +G ++ P++P + KM++ + C + +L+I+A LS + FV P +K AD +
Sbjct: 600 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 659
Query: 546 ARFGH-IDGDHLTLLNVYHAYKQNNE-----DPSWCYDNFVNHRALKSADNVRQQLVRIM 599
DHLT++N + +++ + +C++ F++ L+ N++ Q +
Sbjct: 660 KELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 719
Query: 600 --ARF----NLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHL 635
A F N K ++ NS + + I+ + AG + +VA +
Sbjct: 720 LGAGFVSSRNPKDPESNINSDNEKI-IKAVICAGLYPKVAKI 760
Score = 329 (120.9 bits), Expect = 5.2e-70, Sum P(2) = 5.2e-70
Identities = 77/215 (35%), Positives = 113/215 (52%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ L+ K RY E+ R+ LP + ++E + ++ +QV ++ GETG GKTTQ+
Sbjct: 95 DQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQV 154
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGE--EVGYSIRFED 156
QF+L+ IE + I CTQP E + G GY IR +
Sbjct: 155 TQFILDNY-IER-GKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQS 212
Query: 157 -CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP 215
+ + Y T G++L+ +DP L IVLDE HER L +DVL ++K++L R
Sbjct: 213 RLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS 272
Query: 216 DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPV 250
DLK+++MSATL AEKF YF P++ +PG PV
Sbjct: 273 DLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 307
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 406 (148.0 bits), Expect = 8.9e-70, Sum P(3) = 8.9e-70
Identities = 100/329 (30%), Positives = 177/329 (53%)
Query: 280 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 339
G +L+FL G I+ ++ + ++ KV+ L+S L Q F
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSNDRRFYSERY---KVIALHSILSTQDQAAAF-------T 917
Query: 340 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 399
RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL+ + +SKASA Q
Sbjct: 918 LPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQ 977
Query: 400 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 457
R GRAGR + G CFR+YT + F + + PEILR L L + K + F
Sbjct: 978 RQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLSK 1036
Query: 458 FMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
+DPP + + A+ +L +GA + ++ LT +G+ ++ P++ ++ KML+ + C +
Sbjct: 1037 ALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLD 1096
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP---- 572
+ +++A+++ + F P + AD AK+ D DHLT+ N Y +K+ ++
Sbjct: 1097 PVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRS 1156
Query: 573 --SWCYDNFVNHRALKSADNVRQQLVRIM 599
++C NF+N +L + ++V+Q+L++++
Sbjct: 1157 EITYCRRNFLNRTSLLTLEDVKQELIKLV 1185
Score = 388 (141.6 bits), Expect = 8.9e-70, Sum P(3) = 8.9e-70
Identities = 77/209 (36%), Positives = 128/209 (61%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
+Y ++L++R+ LPV++ ++ ++ LK ++V+++ GETGSGK+TQ+P F+LE + + +
Sbjct: 561 KYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEA 620
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE-----VGYSIRFEDCSSARTVLKYLT 168
K I CTQP +E+ G GY IR E + T L Y T
Sbjct: 621 S-KCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCT 679
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT+++
Sbjct: 680 TGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDS 739
Query: 229 EKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
EKF YF P++++ GR +PVE+F+ ++
Sbjct: 740 EKFSTYFTHCPILRISGRSYPVEVFHLED 768
Score = 43 (20.2 bits), Expect = 8.9e-70, Sum P(3) = 8.9e-70
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 652 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 682
+HPS+ D + W++Y E + +R ++R T
Sbjct: 1256 VHPSSVNRDLQTHGWLLYQEKIRYARVYLRETT 1288
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 391 (142.7 bits), Expect = 1.8e-69, Sum P(2) = 1.8e-69
Identities = 81/205 (39%), Positives = 119/205 (58%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
R ++ +R +LP+ Q LQ LK +QV+++ G+TG GK+TQ+PQ++L
Sbjct: 151 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---- 206
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLL 173
+ACTQP E G +VGY IRFE SA T + +LT G+LL
Sbjct: 207 -----VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLL 261
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 233
R+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT+ F
Sbjct: 262 RQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSS 321
Query: 234 YFYGAPLMKVPGRLHPVEIFYTQEP 258
YF AP+++VPGRL P+ +F P
Sbjct: 322 YFSNAPVVQVPGRLFPITVFDVAPP 346
Score = 375 (137.1 bits), Expect = 1.8e-69, Sum P(2) = 1.8e-69
Identities = 81/192 (42%), Positives = 118/192 (61%)
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+ASA QR GRAG
Sbjct: 349 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 408
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT PG CFRLY E ++ P PEI R L + VL +K + + D F F++PP P
Sbjct: 409 RTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPA 467
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
+L A+ L GALD LT +G +++ P+D + KML+ ++ +L+I+A L
Sbjct: 468 SLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAAL 527
Query: 526 SVPNCFVRPREA 537
SV + F R ++
Sbjct: 528 SVQSPFTRSAQS 539
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 429 (156.1 bits), Expect = 2.1e-69, Sum P(2) = 2.1e-69
Identities = 121/392 (30%), Positives = 196/392 (50%)
Query: 263 LEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQV---GPVK--VVP 317
LE + I + E G ILVFL G + I T M DQ+ G + ++P
Sbjct: 486 LELTAALIRHIAVNENEGAILVFLPGWDNIS------TLNDLLMSDQMFKSGRYRFIIIP 539
Query: 318 LYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKV 377
L+S +P Q ++ RKIV++TNIAETS+TID +VYVID G K+
Sbjct: 540 LHSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETH 599
Query: 378 YNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSN 437
++ + + ++ +S A+A QR GRAGR PGKC+ LY + L PEI R+
Sbjct: 600 FDTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYNGLRASL-LDNYQLPEIQRTP 658
Query: 438 LANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSE 495
L L +K L + + F MDPP+ + A+ L L ALD D LT +G ++
Sbjct: 659 LEELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLAR 718
Query: 496 FPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHID-GD 554
P++P + KM++ C + +L+I+A LS + F P +K AD+ + F D
Sbjct: 719 MPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQRRKMFSQNSRSD 778
Query: 555 HLTLLNVY----HAYKQNNE-DPSWCYDNFVNHRALKSADNVRQQLVRIMARFNL----- 604
HL+++N + A +Q + + +C+DNF++ L+ N++ Q + R
Sbjct: 779 HLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSKD 838
Query: 605 -KLCSNDFNSRDYYVNIRKAMLAGYFMQVAHL 635
K S++ NS + + ++ ++AG + +VA +
Sbjct: 839 PKDPSSNINSENKKL-VKAVIVAGLYPKVAKI 869
Score = 352 (129.0 bits), Expect = 2.1e-69, Sum P(2) = 2.1e-69
Identities = 76/206 (36%), Positives = 117/206 (56%)
Query: 55 YYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRR 114
Y E+L+ RK LP + +EE ++++ AN+V+++ GETG GKTTQ+ QF+L+ D +
Sbjct: 210 YIEMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILD--DFIQRGQG 267
Query: 115 RKMMIACTQPXXXXXXXXXXXXXEEMDVTIGE--EVGYSIRFED-CSSARTVLKYLTDGM 171
+ CTQP E +GE GY IR + + L Y T G+
Sbjct: 268 SLCRVVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGV 327
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
+L+ +DP L +VLDE HER++ +D+L ++K++L R DLK+V+MSATL AEKF
Sbjct: 328 ILQWLHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKF 387
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQE 257
YF P++ +PG PV + ++
Sbjct: 388 SKYFNNCPMIHIPGYTFPVTEYLLED 413
Score = 68 (29.0 bits), Expect = 4.8e-30, Sum P(3) = 4.8e-30
Identities = 28/128 (21%), Positives = 61/128 (47%)
Query: 574 WCYDNFVNHRALKSADNVRQQLVRIMARFNL------KLCSNDFNSRDYYVNIRKAMLAG 627
+C+DNF++ L+ N++ Q + R K S++ NS + + ++ ++AG
Sbjct: 803 YCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSKDPKDPSSNINSENKKL-VKAVIVAG 861
Query: 628 YFMQVA-----HLERTGQYLTV--KDNQVVHLHPSNCLDHKPE----WVIYNEYVLTSRN 676
+ +VA H ++ + V K + V +HP + + + W++Y+ + T+
Sbjct: 862 LYPKVAKISPSHNKKRPMPVKVYTKADGKVCIHPKSVNAEETQFQYKWLVYHLKMKTTSI 921
Query: 677 FIRTVTDV 684
F+ T+V
Sbjct: 922 FLYDCTEV 929
Score = 37 (18.1 bits), Expect = 4.8e-30, Sum P(3) = 4.8e-30
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 474 LNYLGALDDDGNL 486
+ LG +DDD N+
Sbjct: 472 IEVLGMMDDDDNI 484
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 448 (162.8 bits), Expect = 2.3e-69, Sum P(2) = 2.3e-69
Identities = 121/402 (30%), Positives = 206/402 (51%)
Query: 250 VEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQ 309
V++ E ++ L + + I + E G ILVFL G + I + ++ D+
Sbjct: 459 VDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDK 518
Query: 310 VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVID 369
++PL+S +P Q ++F+ RKIV++TNIAETS+TID +VYVID
Sbjct: 519 F---LIIPLHSLMPTVNQTQVFKRTPPGV-------RKIVIATNIAETSITIDDVVYVID 568
Query: 370 PGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT--EKSFNNDLQP 427
G K+ ++ + + ++ +SKA+A QR GRAGR QPG C+ LY S +D Q
Sbjct: 569 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ- 627
Query: 428 QTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGN 485
PEILR+ L L +K L + + +F MDPP+ E ++ ++ L L ALD
Sbjct: 628 --LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEE 685
Query: 486 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAK 545
LT +G ++ P++P + KM++ + C + +L+I+A LS + FV P +K AD +
Sbjct: 686 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 745
Query: 546 ARFGH-IDGDHLTLLNVYHAYKQNNE-----DPSWCYDNFVNHRALKSADNVRQQLVRIM 599
DHLT++N + +++ + +C++ F++ L+ N++ Q +
Sbjct: 746 KELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 805
Query: 600 --ARF----NLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHL 635
A F N K ++ NS + + I+ + AG + +VA +
Sbjct: 806 LGAGFVSSRNPKDPESNINSDNEKI-IKAVICAGLYPKVAKI 846
Score = 329 (120.9 bits), Expect = 2.3e-69, Sum P(2) = 2.3e-69
Identities = 77/215 (35%), Positives = 113/215 (52%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ L+ K RY E+ R+ LP + ++E + ++ +QV ++ GETG GKTTQ+
Sbjct: 181 DQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQV 240
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGE--EVGYSIRFED 156
QF+L+ IE + I CTQP E + G GY IR +
Sbjct: 241 TQFILDNY-IER-GKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQS 298
Query: 157 -CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP 215
+ + Y T G++L+ +DP L IVLDE HER L +DVL ++K++L R
Sbjct: 299 RLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS 358
Query: 216 DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPV 250
DLK+++MSATL AEKF YF P++ +PG PV
Sbjct: 359 DLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 393
Score = 64 (27.6 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 30/130 (23%), Positives = 62/130 (47%)
Query: 571 DPSWCYDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAM 624
+ +C++ F++ L+ N++ Q + A F N K ++ NS + + I+ +
Sbjct: 777 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKI-IKAVI 835
Query: 625 LAGYFMQVA----HLERTGQYLTV--KDNQVVHLHPSNC----LDHKPEWVIYNEYVLTS 674
AG + +VA +L + + + V K + +V +HP + D W+IY+ + TS
Sbjct: 836 CAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTS 895
Query: 675 RNFIRTVTDV 684
++ T+V
Sbjct: 896 SIYLYDCTEV 905
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 427 (155.4 bits), Expect = 2.9e-69, Sum P(2) = 2.9e-69
Identities = 136/454 (29%), Positives = 221/454 (48%)
Query: 274 HMCEPS--GDILVFLTGEEEIEDACRKITKEITNMGDQV-GPVKVVPLYSTLPPAMQQKI 330
++C S G IL+FL G +EI +I + D +V L+S + Q+ +
Sbjct: 525 NICNSSDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNMQTLDQKNV 584
Query: 331 FEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVS 390
+ RKI++STNIAETS+T++ +V+VID G K+K ++ V L
Sbjct: 585 LKTPPSGI-------RKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTV 637
Query: 391 PISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGI 450
ISKASA QR GRAGR +PG CF L++ F N L+ QT PE+ R L L K L
Sbjct: 638 WISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQT-PELRRMPLQELCLHTKLLAP 696
Query: 451 DDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKM 505
+ DF+ DPP P ++R A+++L + A+D +LTE+G ++E P++P + KM
Sbjct: 697 VNCPVVDFLMKAPDPP-PALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLGKM 755
Query: 506 LVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARFGH-IDGDHLTLLNVY 562
++ + C + IL+I+ L+ + FV P A ++AA + R DH+ LL +
Sbjct: 756 VLCAVVLKCLDPILTIACTLAYRDPFVLPTVASQKRAAMLCRKRLAAGTFSDHMVLLRAF 815
Query: 563 HAYKQNNEDPSW----CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYV 618
A+++ D W C NF++ ++ +R QL+ + + RD V
Sbjct: 816 QAWQKARSD-GWERVFCEKNFLSQATMEIIIGMRTQLLGQLRALGFVRARGGADIRDVNV 874
Query: 619 N------IRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVL 672
N ++ A++AG + + H++R LT + V HP++ L Y + +
Sbjct: 875 NSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPTSVLSQAQ----YKK-IP 929
Query: 673 TSRNFIRTVTDVRGEWLI-DIAPHYYDLSNFPQC 705
S V + +WLI D + ++N C
Sbjct: 930 PSNGQAAAVQALPTDWLIYDEMTRAHRIANIRCC 963
Score = 357 (130.7 bits), Expect = 2.9e-69, Sum P(2) = 2.9e-69
Identities = 79/193 (40%), Positives = 117/193 (60%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGV-DIETPDRRRKMMIA 120
R+SLPV+++KEE ++++K N+V+++VGETGSGKTTQIPQF+L+ + P R I
Sbjct: 100 RQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGVPCR-----IF 154
Query: 121 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMT-D 179
CTQP E +G+ VGY IR E S RT+L + T+G+LLR M D
Sbjct: 155 CTQPRRLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGD 214
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
L +++DE HER +D L L+++L+N+ +LKL++ SA L+A F YF P
Sbjct: 215 SALSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYFGSCP 274
Query: 240 LMKVPGRLHPVEI 252
++ + GR P E+
Sbjct: 275 VIHIQGR--PFEV 285
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 438 (159.2 bits), Expect = 3.4e-69, Sum P(2) = 3.4e-69
Identities = 128/406 (31%), Positives = 218/406 (53%)
Query: 257 EPERDYLEAAIRTVVQI-HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
+ E+ L+ + + I H C+ +G IL+FL G +EI +I + D +V
Sbjct: 599 DDEKVDLDLIMHLLYNICHGCD-AGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQV 657
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
L+S + + Q+K+ + RKI++STNIAETS+T++ +V+VID G K+
Sbjct: 658 FMLHSNMQTSDQKKVLKNPPAGV-------RKIILSTNIAETSITVNDVVFVIDSGKVKE 710
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
K ++ V L + ISKASA QR GRAGR +PG CFRL++ F N L+ QT PE+LR
Sbjct: 711 KSFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLR 769
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEMG 490
L L K L + DF+ +PP P ++R A+++L + A+D +LTE+G
Sbjct: 770 MPLQELCLHTKLLAPVNCPIADFLMKAPEPP-PALIVRNAVQMLKTIDAMDAWEDLTELG 828
Query: 491 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARF 548
+++ P++P + KM++ + C + IL+I+ L+ + FV P +A ++AA + RF
Sbjct: 829 YHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRF 888
Query: 549 -GHIDGDHLTLLNVYHAYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVR------- 597
DH+ LL + A+++ D ++C NF++ ++ +R QL+
Sbjct: 889 TAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGF 948
Query: 598 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT 643
+ AR + + NS ++ V ++ A++AG + + H++R LT
Sbjct: 949 VRARGGGDIRDVNTNSENWAV-VKAALVAGMYPNLVHVDRENVVLT 993
Score = 339 (124.4 bits), Expect = 3.4e-69, Sum P(2) = 3.4e-69
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE-TPDRRRKMMIA 120
R+SLPV++++EE ++++K N+V+++VGETGSGKTTQIPQF+L+ P R I
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-----IF 243
Query: 121 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMT-D 179
CTQP E IG+ +GY IR E S +T+L + T+G+LLR M D
Sbjct: 244 CTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGD 303
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
L +++DE HER +D L L+++L+ P LKL++ SA L+ F YF P
Sbjct: 304 STLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCP 363
Query: 240 LMKVPGRLHPVEI 252
++ + GR P E+
Sbjct: 364 VIYIQGR--PFEV 374
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 455 (165.2 bits), Expect = 6.2e-69, Sum P(2) = 6.2e-69
Identities = 114/362 (31%), Positives = 194/362 (53%)
Query: 280 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 339
G IL+FL G EI ++I K N +PL+S L A Q+ IF+
Sbjct: 821 GSILIFLPGVLEISSTIKEINKSSDNK------FMALPLHSGLTSAEQKSIFKTAPKGK- 873
Query: 340 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 399
RK+VVSTNIAETS+TI V VID G +K ++ ++ L+ S S+A Q
Sbjct: 874 ------RKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQ 927
Query: 400 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 457
R GRAGR G C+ LYT+++F +Q Q PEI R+ L N L +K +GI ++ F
Sbjct: 928 RRGRAGRVTAGTCYHLYTKETFEA-MQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSS 986
Query: 458 FMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNE 517
+D P +L +A + L+ +GAL ++ +LT++G +S P DPQ +K+L+ + C +
Sbjct: 987 GLDAPDKSSLDKANQFLHEIGALQEN-SLTKLGNYISYLPTDPQSAKLLILGCIFGCLDI 1045
Query: 518 ILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYD 577
L+++A+ S + F+ E + + + +FG+ GD +++ N Y+AY +N+ + +
Sbjct: 1046 CLTLAAISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMANAYNAY-MSNKSKRFLTE 1104
Query: 578 NFVNHRALKSADNVRQQLVRIMARF---NLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 634
N++++ +K + R Q + ++ N KL + + + + IR + ++ QVA
Sbjct: 1105 NYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWPLIRGIIAGAFYPQVAR 1164
Query: 635 LE 636
++
Sbjct: 1165 IQ 1166
Score = 322 (118.4 bits), Expect = 6.2e-69, Sum P(2) = 6.2e-69
Identities = 84/277 (30%), Positives = 142/277 (51%)
Query: 49 KPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDI 108
+ +S + E+L +R LP + ++E + + + QV ++ GETGSGK+TQ+ QF+++ +
Sbjct: 557 RKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDL-Y 615
Query: 109 ETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLT 168
D K I CTQP +E +G E GY IR E+ +S+ T + + T
Sbjct: 616 SKGDFTTK--IICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFAT 673
Query: 169 DGMLLR---EAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
G+LLR + + +L+ I++DE HER++ D L LLK+++K+ P LK++++SAT
Sbjct: 674 TGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSAT 733
Query: 226 LEAEKFQGYFYGAPL--MKVPGRLHPVEIFYTQE--PERDYLEAAIRTVVQIHMCEPSGD 281
+ + F +F PL + + GR +P++ FY E +Y + PS D
Sbjct: 734 ISVDTFINFFE-KPLTPLHIEGRTYPIQDFYLDSILAESEY---KFQNS-DGEFITPSAD 788
Query: 282 ILVFLTGE---EEIEDACRKITKEITNMGDQVGPVKV 315
+ +G E I R I K +T Q G + +
Sbjct: 789 SHFYKSGNLNYELIAHVTRFIDKRLTQEAKQDGSILI 825
Score = 37 (18.1 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 188 IVLDEAHERTLATDVLFGLLKEVLKNRPD 216
IV+ + +E TLA + +++E+LK D
Sbjct: 459 IVVSK-NEYTLANYIKLAIVRELLKYLTD 486
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 455 (165.2 bits), Expect = 6.2e-69, Sum P(2) = 6.2e-69
Identities = 114/362 (31%), Positives = 194/362 (53%)
Query: 280 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXX 339
G IL+FL G EI ++I K N +PL+S L A Q+ IF+
Sbjct: 821 GSILIFLPGVLEISSTIKEINKSSDNK------FMALPLHSGLTSAEQKSIFKTAPKGK- 873
Query: 340 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 399
RK+VVSTNIAETS+TI V VID G +K ++ ++ L+ S S+A Q
Sbjct: 874 ------RKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQ 927
Query: 400 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--D 457
R GRAGR G C+ LYT+++F +Q Q PEI R+ L N L +K +GI ++ F
Sbjct: 928 RRGRAGRVTAGTCYHLYTKETFEA-MQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSS 986
Query: 458 FMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNE 517
+D P +L +A + L+ +GAL ++ +LT++G +S P DPQ +K+L+ + C +
Sbjct: 987 GLDAPDKSSLDKANQFLHEIGALQEN-SLTKLGNYISYLPTDPQSAKLLILGCIFGCLDI 1045
Query: 518 ILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYD 577
L+++A+ S + F+ E + + + +FG+ GD +++ N Y+AY +N+ + +
Sbjct: 1046 CLTLAAISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMANAYNAY-MSNKSKRFLTE 1104
Query: 578 NFVNHRALKSADNVRQQLVRIMARF---NLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 634
N++++ +K + R Q + ++ N KL + + + + IR + ++ QVA
Sbjct: 1105 NYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWPLIRGIIAGAFYPQVAR 1164
Query: 635 LE 636
++
Sbjct: 1165 IQ 1166
Score = 322 (118.4 bits), Expect = 6.2e-69, Sum P(2) = 6.2e-69
Identities = 84/277 (30%), Positives = 142/277 (51%)
Query: 49 KPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDI 108
+ +S + E+L +R LP + ++E + + + QV ++ GETGSGK+TQ+ QF+++ +
Sbjct: 557 RKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDL-Y 615
Query: 109 ETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLT 168
D K I CTQP +E +G E GY IR E+ +S+ T + + T
Sbjct: 616 SKGDFTTK--IICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFAT 673
Query: 169 DGMLLR---EAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
G+LLR + + +L+ I++DE HER++ D L LLK+++K+ P LK++++SAT
Sbjct: 674 TGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSAT 733
Query: 226 LEAEKFQGYFYGAPL--MKVPGRLHPVEIFYTQE--PERDYLEAAIRTVVQIHMCEPSGD 281
+ + F +F PL + + GR +P++ FY E +Y + PS D
Sbjct: 734 ISVDTFINFFE-KPLTPLHIEGRTYPIQDFYLDSILAESEY---KFQNS-DGEFITPSAD 788
Query: 282 ILVFLTGE---EEIEDACRKITKEITNMGDQVGPVKV 315
+ +G E I R I K +T Q G + +
Sbjct: 789 SHFYKSGNLNYELIAHVTRFIDKRLTQEAKQDGSILI 825
Score = 37 (18.1 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 188 IVLDEAHERTLATDVLFGLLKEVLKNRPD 216
IV+ + +E TLA + +++E+LK D
Sbjct: 459 IVVSK-NEYTLANYIKLAIVRELLKYLTD 486
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 444 (161.4 bits), Expect = 1.9e-68, Sum P(2) = 1.9e-68
Identities = 122/402 (30%), Positives = 208/402 (51%)
Query: 250 VEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQ 309
+E+ + + + + A IR +V + E G ILVFL G + I + ++ D+
Sbjct: 576 MEMIDDDKVDLNLIAALIRHIV---LEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDR 632
Query: 310 VGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVID 369
++PL+S +P Q ++F+ RKIV++TNIAETS+TID +VYVID
Sbjct: 633 F---LIIPLHSLMPTVNQTQVFKKTPPGV-------RKIVIATNIAETSITIDDVVYVID 682
Query: 370 PGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT--EKSFNNDLQP 427
G K+ ++ + + ++ +SKA+A QR GRAGR QPG C+ LY S +D Q
Sbjct: 683 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQ- 741
Query: 428 QTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGN 485
PEILR+ L L +K L + + +F MDPP+ E + +++ L L ALD
Sbjct: 742 --LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEE 799
Query: 486 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAK 545
LT +G ++ P++P + KM++ + C + +L+I+A LS + FV P +K AD +
Sbjct: 800 LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR 859
Query: 546 ARFGH-IDGDHLTLLNVYHAYKQNNE-----DPSWCYDNFVNHRALKSADNVRQQLVRIM 599
DHLT++N + +++ + +C++ F++ L+ N++ Q +
Sbjct: 860 KELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHL 919
Query: 600 --ARF----NLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHL 635
A F N K ++ NS + + I+ + AG + +VA +
Sbjct: 920 LGAGFVSSRNPKDPKSNINSDNEKI-IKAVICAGLYPKVAKI 960
Score = 327 (120.2 bits), Expect = 1.9e-68, Sum P(2) = 1.9e-68
Identities = 77/215 (35%), Positives = 113/215 (52%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ L+ K RY E+ R+ LP + ++E + ++ +QV ++ GETG GKTTQ+
Sbjct: 295 DQQLLEDLRKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQV 354
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGE--EVGYSIRFED 156
QF+L+ IE + I CTQP E + G GY IR +
Sbjct: 355 TQFILDDY-IER-GKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQS 412
Query: 157 -CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP 215
+ + Y T G++L+ +D L IVLDE HER L +DVL ++K++L RP
Sbjct: 413 RLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRP 472
Query: 216 DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPV 250
DLK+++MSATL AEKF YF P++ +PG PV
Sbjct: 473 DLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 507
Score = 64 (27.6 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 571 DPSWCYDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAM 624
+ +C++ F++ L+ N++ Q + A F N K ++ NS + + I+ +
Sbjct: 891 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKI-IKAVI 949
Query: 625 LAGYFMQVA----HLERTGQYLTV--KDNQVVHLHPSNCLDHKPE----WVIYNEYVLTS 674
AG + +VA +L + + + V K + +V +HP + + E W+IY+ + TS
Sbjct: 950 CAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTS 1009
Query: 675 RNFIRTVTDV 684
++ T+V
Sbjct: 1010 SIYLYDCTEV 1019
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 397 (144.8 bits), Expect = 2.2e-68, Sum P(3) = 2.2e-68
Identities = 106/347 (30%), Positives = 180/347 (51%)
Query: 262 YLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYST 321
YLE R+ Q E G +L+FL G I+ ++ + ++ KV+ L+S
Sbjct: 853 YLEITDRSP-QFKNVE--GAVLIFLPGLAHIQQLYDLLSTDRRFFSERY---KVIALHSI 906
Query: 322 LPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR 381
L Q F RKIV++TNIAET +TI +V+VID G K+ Y+
Sbjct: 907 LSTQDQAAAF-------TLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 382 VRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANT 441
++ SL+ + +SKASA QR GRAGR + G CFR+YT + F + + PEILR L
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEEL 1018
Query: 442 VLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPL 498
L + K + F +DPP + + A+ +L +GA + ++ LT +G+ ++ P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPV 1078
Query: 499 DPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTL 558
+ ++ KML+ + C + + +++A+++ + F P + AD AK+ D DHLT+
Sbjct: 1079 NVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTI 1138
Query: 559 LNVYHAYKQNNEDP------SWCYDNFVNHRALKSADNVRQQLVRIM 599
N Y +K+ ++ ++C NF+N +L + + R L+++M
Sbjct: 1139 YNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLERRRTTLLKLM 1185
Score = 387 (141.3 bits), Expect = 2.2e-68, Sum P(3) = 2.2e-68
Identities = 78/209 (37%), Positives = 126/209 (60%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
+Y +L++R+ LPV++ + ++ LK ++V+++ GETGSGK+TQ+P F+LE + +
Sbjct: 558 KYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGT 617
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE-----VGYSIRFEDCSSARTVLKYLT 168
K I CTQP +E+ G GY IR E +S T L Y T
Sbjct: 618 S-KCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCT 676
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT+++
Sbjct: 677 TGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDS 736
Query: 229 EKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
EKF YF P++++ GR +PVE+F+ ++
Sbjct: 737 EKFSTYFTHCPILRISGRSYPVEVFHLED 765
Score = 41 (19.5 bits), Expect = 2.2e-68, Sum P(3) = 2.2e-68
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 652 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 682
+HPS+ D + W++Y E + +R ++R T
Sbjct: 1256 VHPSSVNRDLQTYGWLLYQEKIRYARVYLRETT 1288
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 396 (144.5 bits), Expect = 2.9e-68, Sum P(3) = 2.9e-68
Identities = 112/384 (29%), Positives = 196/384 (51%)
Query: 262 YLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYST 321
YLE R+ Q E G +L+FL G I+ ++ + ++ KV+ L+S
Sbjct: 853 YLEITDRSP-QFKNVE--GAVLIFLPGLAHIQQLYDLLSTDRRFFSERY---KVIALHSI 906
Query: 322 LPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR 381
L Q F RKIV++TNIAET +TI +V+VID G K+ Y+
Sbjct: 907 LSTQDQAAAF-------TLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 382 VRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANT 441
++ SL+ + +SKASA QR GRAGR + G CFR+YT + F + + PEILR L
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEEL 1018
Query: 442 VLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPL 498
L + K + F +DPP + + A+ +L +GA + ++ LT +G+ ++ P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPV 1078
Query: 499 DPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTL 558
+ ++ KML+ + C + + +++A+++ + F P + AD AK+ D DHLT+
Sbjct: 1079 NVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTI 1138
Query: 559 LNVYHAYKQNNEDP------SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFN 612
N Y +K+ ++ ++C NF+N +L + + ++++ + LKL ++
Sbjct: 1139 YNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKRRRTTL-----LKLIF--YS 1191
Query: 613 SRDYYVNIRKAMLAGYFMQVAHLE 636
+ YY + R + F ++A L+
Sbjct: 1192 IKTYYSSSRASQTLS-FQEIALLK 1214
Score = 387 (141.3 bits), Expect = 2.9e-68, Sum P(3) = 2.9e-68
Identities = 78/209 (37%), Positives = 126/209 (60%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
+Y +L++R+ LPV++ + ++ LK ++V+++ GETGSGK+TQ+P F+LE + +
Sbjct: 558 KYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGT 617
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE-----VGYSIRFEDCSSARTVLKYLT 168
K I CTQP +E+ G GY IR E +S T L Y T
Sbjct: 618 S-KCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCT 676
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT+++
Sbjct: 677 TGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDS 736
Query: 229 EKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
EKF YF P++++ GR +PVE+F+ ++
Sbjct: 737 EKFSTYFTHCPILRISGRSYPVEVFHLED 765
Score = 41 (19.5 bits), Expect = 2.9e-68, Sum P(3) = 2.9e-68
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 652 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 682
+HPS+ D + W++Y E + +R ++R T
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKIRYARVYLRETT 1285
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 696 (250.1 bits), Expect = 4.2e-68, Sum P(2) = 4.2e-68
Identities = 192/625 (30%), Positives = 318/625 (50%)
Query: 55 YYEIL-EKRK---SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIET 110
+Y IL E R+ LP++ + + L+ + Q+++L+GETGSGK+TQ+ QF+ + +
Sbjct: 289 HYLILRECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADS-GVAA 347
Query: 111 PDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE-VGYSIRFEDCSSARTVLKYLTD 169
+ I CTQP EE E V + F + + Y+TD
Sbjct: 348 SES-----IVCTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTD 402
Query: 170 GMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAE 229
LL+ M D L +++DEAHER+L TD+L LL+++L R DL+LV+MSAT +A
Sbjct: 403 NCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADAN 462
Query: 230 KFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGE 289
+ Y + ++ V GR PVEI Y+ + +VV + +GD++
Sbjct: 463 QLSQYLFDCGILHVNGRNFPVEIVYSPSGTEE------NSVVG-RIASYAGDVVKMAVEI 515
Query: 290 EEIEDACRKITKEITNMGDQVGPVK--VVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRK 347
+ E I +T+ + + V P LP + K+ RK
Sbjct: 516 HKTEKE-GTILAFLTSQAEVEWACERFVAPSAIALP--LHGKLSFEEQFMVFQNYPGRRK 572
Query: 348 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRT 407
++ +TNIAETSLTI G+ YVID G K+ Y PR + L V +S++SA QR+GRAGRT
Sbjct: 573 VIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRT 632
Query: 408 QPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETL 467
+PG+C+RLY++ F++ + PEI R +L +L + LGID++ F+F+D P PE +
Sbjct: 633 EPGRCYRLYSKTDFDS-MNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAI 691
Query: 468 MRALEVLNYLGAL-DDDG--NLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAM 524
A++ L LGA+ + +G LT+ G + + L+P++ K+++ ++ E + ++A+
Sbjct: 692 AMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAV 751
Query: 525 LSVPN---CFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP--SWCYDNF 579
++ + C V + + AD K +F + +GD TLL+VY + D WC++N
Sbjct: 752 MANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENS 811
Query: 580 VNHRALKSADNVRQQLVRIMARFNLKLCS--------NDFNSRDYYVN-IRKAMLAGYFM 630
+N ++++ ++ ++L + R L L S N+ D Y+ + A LA
Sbjct: 812 LNAKSMRRCEDTVKELEICIER-ELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVA 870
Query: 631 QVAHLERTGQYLTVKDNQVVHLHPS 655
++ G Y +Q V LHPS
Sbjct: 871 MYTGYDQLG-YEVALTSQQVQLHPS 894
Score = 165 (63.1 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 58/238 (24%), Positives = 111/238 (46%)
Query: 486 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPN---CFVRPREAQKAAD 542
LT+ G + + L+P++ K+++ ++ E + ++A+++ + C V + + AD
Sbjct: 713 LTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKAD 772
Query: 543 EAKARFGHIDGDHLTLLNVYHAYKQNNEDP--SWCYDNFVNHRALKSADNVRQQLVRIMA 600
K +F + +GD TLL+VY + D WC++N +N ++++ ++ ++L +
Sbjct: 773 RLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIE 832
Query: 601 RFNLKLCS--------NDFNSRDYYVN-IRKAMLAGYFMQVAHLERTGQYLTVKDNQVVH 651
R L L S N+ D Y+ + A LA ++ G Y +Q V
Sbjct: 833 R-ELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLG-YEVALTSQQVQ 890
Query: 652 LHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVT--DVRGEWLIDIAPHYYDLSNFPQ 704
LHPS L KP WV++ E + ++ VT D +++D P + D S +
Sbjct: 891 LHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDPPPPF-DASQMDE 947
Score = 40 (19.1 bits), Expect = 4.2e-68, Sum P(2) = 4.2e-68
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 625 LAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDHK 661
L G Q+ HLE ++LTV VH + + +D +
Sbjct: 1048 LFGSGAQIKHLEVDQRFLTVD----VHYYGDDVVDDR 1080
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 392 (143.0 bits), Expect = 8.6e-68, Sum P(3) = 8.6e-68
Identities = 110/384 (28%), Positives = 194/384 (50%)
Query: 262 YLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYST 321
YLE R+ Q E G +L+FL G I+ ++ + ++ KV+ L+S
Sbjct: 853 YLEITDRSP-QFKNVE--GAVLIFLPGLAHIQQLYDLLSTDRRFFSERY---KVIALHSI 906
Query: 322 LPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPR 381
L Q F RKIV++TNIAET +TI +V+VID G K+ Y+
Sbjct: 907 LSTQDQAAAF-------TLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 382 VRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANT 441
++ SL+ + +SKASA QR GRAGR + G CFR+YT + F + + PEILR L
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEEL 1018
Query: 442 VLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPL 498
L + K + F +DPP + + A+ +L +GA + ++ LT +G+ ++ P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPV 1078
Query: 499 DPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTL 558
+ ++ KML+ + C + + +++A+++ + F P + AD AK+ D DHLT+
Sbjct: 1079 NVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTI 1138
Query: 559 LNVYHAYKQNNEDP------SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFN 612
N Y +K+ ++ ++C NF+N +L + + ++ +A ++ ++
Sbjct: 1139 YNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKVSFPETIA---IQYFYRFYS 1195
Query: 613 SRDYYVNIRKAMLAGYFMQVAHLE 636
+ YY + L+ F ++A L+
Sbjct: 1196 IKTYYSSSASQTLS--FQEIALLK 1217
Score = 387 (141.3 bits), Expect = 8.6e-68, Sum P(3) = 8.6e-68
Identities = 78/209 (37%), Positives = 126/209 (60%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
+Y +L++R+ LPV++ + ++ LK ++V+++ GETGSGK+TQ+P F+LE + +
Sbjct: 558 KYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGT 617
Query: 114 RRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEE-----VGYSIRFEDCSSARTVLKYLT 168
K I CTQP +E+ G GY IR E +S T L Y T
Sbjct: 618 S-KCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCT 676
Query: 169 DGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 228
G+LLR+ D LL +++DE HER++ +D L +LKE+L+ R DL L++MSAT+++
Sbjct: 677 TGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDS 736
Query: 229 EKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
EKF YF P++++ GR +PVE+F+ ++
Sbjct: 737 EKFSTYFTHCPILRISGRSYPVEVFHLED 765
Score = 41 (19.5 bits), Expect = 8.6e-68, Sum P(3) = 8.6e-68
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 652 LHPSNC-LDHKPE-WVIYNEYVLTSRNFIRTVT 682
+HPS+ D + W++Y E + +R ++R T
Sbjct: 1256 VHPSSVNRDLQTYGWLLYQEKIRYARVYLRETT 1288
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 694 (249.4 bits), Expect = 1.4e-67, Sum P(2) = 1.4e-67
Identities = 185/611 (30%), Positives = 313/611 (51%)
Query: 65 LPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQP 124
LP++ + + L+ + Q+++L+GETGSGK+TQ+ QF+ + + + I CTQP
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADS-GVAASES-----IVCTQP 359
Query: 125 XXXXXXXXXXXXXEEMDVTIGEE-VGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
EE E V + F + + Y+TD LL+ M D L
Sbjct: 360 RKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLS 419
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKV 243
+++DEAHER+L TD+L LLK++L R DL+LV+MSAT +A++ YF+ ++ V
Sbjct: 420 GISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLV 479
Query: 244 PGRLHPVEIFYT-QEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKE 302
GR PVEI Y+ + E + + I + V GD++ + E I
Sbjct: 480 NGRNFPVEIVYSPSDTEENSVVGGIASYV--------GDVVKMAVEIHKTEKE-GTILAF 530
Query: 303 ITNMGDQVGPVK--VVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLT 360
+T+ + + + P LP + K+ RK++ +TNIAETSLT
Sbjct: 531 LTSQAEVEWACERFITPSAIALP--LHGKLSFEEQFRVFQNHPGRRKVIFATNIAETSLT 588
Query: 361 IDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKS 420
I G+ YVID G K+ Y PR + L V +S++SA QR+GRAGRT+PG+C+RLY++
Sbjct: 589 IPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKND 648
Query: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 480
F++ + PEI R +L +L + LG++++ F+F+D P PE + A++ L LGA+
Sbjct: 649 FDS-MNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAV 707
Query: 481 -DDDG--NLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPN---CFVRP 534
+ +G LT+ G + + L+P++ K+++ ++ E + ++A+++ + C V
Sbjct: 708 VEKNGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGN 767
Query: 535 REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ--NNEDPSWCYDNFVNHRALKSADNVR 592
+ + AD K +F + +GD TLL+VY + WC++N +N ++++ ++
Sbjct: 768 FDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTV 827
Query: 593 QQLVRIMARFNLKLCSNDF---NSRD---YYVNIRKAMLAGYFMQVAHLERTGQ--YLTV 644
++L + R L L S + N + + +++ +LA VA Q Y
Sbjct: 828 KELEICIER-ELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVA 886
Query: 645 KDNQVVHLHPS 655
Q V LHPS
Sbjct: 887 LTGQQVQLHPS 897
Score = 161 (61.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 56/237 (23%), Positives = 111/237 (46%)
Query: 486 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPN---CFVRPREAQKAAD 542
LT+ G + + L+P++ K+++ ++ E + ++A+++ + C V + + AD
Sbjct: 716 LTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKAD 775
Query: 543 EAKARFGHIDGDHLTLLNVYHAYKQ--NNEDPSWCYDNFVNHRALKSADNVRQQLVRIMA 600
K +F + +GD TLL+VY + WC++N +N ++++ ++ ++L +
Sbjct: 776 RLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIE 835
Query: 601 RFNLKLCSNDF---NSRD---YYVNIRKAMLAGYFMQVAHLERTGQ--YLTVKDNQVVHL 652
R L L S + N + + +++ +LA VA Q Y Q V L
Sbjct: 836 R-ELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQL 894
Query: 653 HPSNCL---DHKPEWVIYNEYVLTSRNFIRTVT--DVRGEWLIDIAPHYYDLSNFPQ 704
HPS L KP WV++ E + ++ VT D +++D P + D+S +
Sbjct: 895 HPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPF-DVSQMDE 950
Score = 37 (18.1 bits), Expect = 1.4e-67, Sum P(2) = 1.4e-67
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 625 LAGYFMQVAHLERTGQYLTV 644
L G Q+ HLE ++LTV
Sbjct: 1051 LFGSGAQIKHLEVDQRFLTV 1070
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 420 (152.9 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 129/399 (32%), Positives = 196/399 (49%)
Query: 255 TQEPERDYLEAAIRTVVQIHMCEPSGD--ILVFLTGEEEIEDACRKITKEITNMGDQVGP 312
T PE+ ++ ++ + +C S D ILVFL G ++I +++ E D
Sbjct: 527 TINPEQ--VDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLL-ENPFFADSA-K 582
Query: 313 VKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGF 372
++ L+S +P Q+K+F RKIV++TNIAE+++TID +VYVID G
Sbjct: 583 FDIICLHSMVPAGEQKKVFNRPPPGC-------RKIVLATNIAESAVTIDDVVYVIDSGR 635
Query: 373 AKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPE 432
K+K Y+P V +L S +SKA+A QR GRAGR QPG C+ LY+ + + PE
Sbjct: 636 MKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAAS-MPDFKVPE 694
Query: 433 ILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTE 488
I R + L +K L + + DF+ DPP +++ AL +L +GAL LTE
Sbjct: 695 IKRMPVEELCLQVKILDPNCKTN-DFLQKLLDPPVDQSIANALSILQDIGALTPQEELTE 753
Query: 489 MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPR---EAQKAADEAK 545
+GEK P+ P +SKML + NC + L+++ F P E QKAA AK
Sbjct: 754 LGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAA-AAK 812
Query: 546 ARFGHI---DGDHLTLLNVYHAYKQ---NNEDPSWCYDNFVNHRALKSADNVRQQLVRIM 599
+ D DHL ++ + +K +C FV+ A+K D +R QL +
Sbjct: 813 LELASLCGGDSDHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESEL 872
Query: 600 ARFNL---KLCSNDFNSRDYYVNIRKAMLAGYFMQVAHL 635
R + + S NSRD + +R + G + V L
Sbjct: 873 KRHGIIPNDISSCSQNSRDPGI-LRAVLAVGLYPMVGRL 910
Score = 348 (127.6 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 70/204 (34%), Positives = 116/204 (56%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
EI + R LP+ K+ +++NQVI++ GETG GKTTQ+PQ++L+ + +R
Sbjct: 179 EITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHM---WSSKRET 235
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
I CTQP E +IGE +GY +R + + + + T+G+LLR
Sbjct: 236 CKIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVL 295
Query: 177 MTDPLLERYKVI---VLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 233
+ + I ++DE HER +D + +++++L + P L+L++MSATL+AE+F G
Sbjct: 296 VGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSG 355
Query: 234 YFYGAPLMKVPGRLHPVEIFYTQE 257
YF G P+++VPG +PV Y ++
Sbjct: 356 YFGGCPVVRVPGFTYPVRTLYLED 379
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 434 (157.8 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 129/413 (31%), Positives = 220/413 (53%)
Query: 257 EPERDYLEAAIRTVVQI-HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
+ E+ L+ + + I H C IL+FL G +EI +I + D +V
Sbjct: 600 DDEKVDLDLIMHLLYNICHGCHKCA-ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQV 658
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
L+S + + Q+K+ + RKI++STNIAETS+T++ +V+VID G K+
Sbjct: 659 FMLHSNMQTSDQKKVLKNPPAGV-------RKIILSTNIAETSITVNDVVFVIDSGKVKE 711
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
K ++ V L + ISKASA QR GRAGR +PG CFRL++ F N L+ QT PE+LR
Sbjct: 712 KSFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLR 770
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMR-ALEVLNYLGALDDDGNLTEMG 490
L L K L + DF+ +PP P ++R A+++L + A+D +LTE+G
Sbjct: 771 MPLQELCLHTKLLAPVNCPIADFLMKAPEPP-PALIVRNAVQMLKTIDAMDAWEDLTELG 829
Query: 491 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARF 548
+++ P++P + KM++ + C + IL+I+ L+ + FV P +A ++AA + RF
Sbjct: 830 YHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRF 889
Query: 549 -GHIDGDHLTLLNVYHAYKQNNEDP---SWCYDNFVNHRALKSADNVRQQLVR------- 597
DH+ LL + A+++ D ++C NF++ ++ +R QL+
Sbjct: 890 TAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGF 949
Query: 598 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLT-VKDNQV 649
+ AR + + NS ++ V ++ A++AG + + H++R LT KD+++
Sbjct: 950 VRARGGGDIRDVNTNSENWAV-VKAALVAGMYPNLVHVDRENVVLTGPKDSRI 1001
Score = 331 (121.6 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 76/194 (39%), Positives = 113/194 (58%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE-TPDRRRKMMIA 120
R+SLPV++++EE ++++K N+V+++VGETGSGKTTQIPQF+L+ P R I
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-----IF 243
Query: 121 CTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS-SARTVLKYLTDGMLLREAMT- 178
CTQP E IG+ +GY IR E S +T+L + T+G+LLR M
Sbjct: 244 CTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAG 303
Query: 179 DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGA 238
D L +++DE HER +D L L+++L+ P LKL++ SA L+ F YF
Sbjct: 304 DSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSC 363
Query: 239 PLMKVPGRLHPVEI 252
P++ + GR P E+
Sbjct: 364 PVIYIQGR--PFEV 375
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 129/264 (48%), Positives = 191/264 (72%)
Query: 138 EEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERT 197
EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++ + L+ Y I++DEAHER+
Sbjct: 9 EEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERS 68
Query: 198 LATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
L TDVLFGLL+EV+ R DLKL+V SAT++AEKF +F P+ +PGR PV+I +++
Sbjct: 69 LNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKT 128
Query: 258 PERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVP 317
P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE +I + + + + + V+P
Sbjct: 129 PQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLP 187
Query: 318 LYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKV 377
+YS LP +Q KIF+ RK +V+TNIAETSLT+DGI++VID G+ K KV
Sbjct: 188 IYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAETSLTVDGIMFVIDSGYCKLKV 240
Query: 378 YNPRVRVESLLVSPISKASAHQRS 401
+NPR+ +++L + PIS+A+A+QRS
Sbjct: 241 FNPRIGMDALQIYPISQANANQRS 264
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 419 (152.6 bits), Expect = 1.9e-65, Sum P(3) = 1.9e-65
Identities = 97/272 (35%), Positives = 154/272 (56%)
Query: 276 CEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXX 335
CE G IL+FL G EI + G ++PL+S++ + Q+K+F
Sbjct: 913 CE-EGAILIFLPGVAEIYMLLDMLAASYRFRGPAAD--WLLPLHSSIASSEQRKVF---- 965
Query: 336 XXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKA 395
RK++ +TNIAETS+TID +VYVID G K+ YNP+ ++ S++ IS+A
Sbjct: 966 ---LRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQA 1022
Query: 396 SAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH 455
+A QR+GRAGR +PG CF LYT F ++P PE+LR L L +K LG+ +
Sbjct: 1023 NARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKP 1082
Query: 456 F--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN 513
F ++PP+ + A+ +L+ +GA++ D LT +G +++ P+D + KML+ +
Sbjct: 1083 FLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFG 1142
Query: 514 CSNEILSISAMLSVPNCFVRPREAQKAADEAK 545
C + ILSI+A LS + F+ P++ ++ D K
Sbjct: 1143 CLSPILSIAAFLSYKSPFIYPKDEKQNVDRVK 1174
Score = 332 (121.9 bits), Expect = 1.9e-65, Sum P(3) = 1.9e-65
Identities = 81/227 (35%), Positives = 124/227 (54%)
Query: 41 SLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQ 100
SL + K +Q+Y ++L+ R +LP+ + K LQ LK V+++ GETGSGKTTQ+PQ
Sbjct: 590 SLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQ 649
Query: 101 FVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEM-DVTIGEE---VGYSIRFED 156
F+L+ D+ I CTQP +E + + G + VGY +R E
Sbjct: 650 FILD--DMIDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLES 707
Query: 157 CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP- 215
S +T L + T G+LLR+ D L I++DE HER+L D L +LK +++ +
Sbjct: 708 ARSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSC 767
Query: 216 D-----LKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
D LK+++MSAT++A+ F YF P++ GR HPV + +E
Sbjct: 768 DNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEE 814
Score = 44 (20.5 bits), Expect = 1.9e-65, Sum P(3) = 1.9e-65
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 650 VHLHPS----NCLDHKPEWVIYNEYVLTSRNFIRTVTDV 684
VH+HPS N + ++++ E V T++ ++R T V
Sbjct: 1337 VHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIV 1375
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 408 (148.7 bits), Expect = 3.6e-65, Sum P(2) = 3.6e-65
Identities = 100/273 (36%), Positives = 152/273 (55%)
Query: 276 CEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXX 335
CE G ILVFL G EI ++ G G ++PL+S++ Q+K+F
Sbjct: 880 CE-EGAILVFLPGMSEINMLLNRLAASYRFRGAS-GDW-LLPLHSSIASTEQKKVF---- 932
Query: 336 XXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKA 395
RK++++TNIAETS+TI+ +VYVID G K+ YNP ++ S++ +SKA
Sbjct: 933 ---LRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKA 989
Query: 396 SAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH 455
+A QR GRAGR +PG CF LYT F ++P PE+LR L L +K LG+ +
Sbjct: 990 NARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKP 1049
Query: 456 F--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN 513
F ++PP+ + A+ +L+ +GAL+ D LT +G +++ P+D + KML+ +
Sbjct: 1050 FLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFG 1109
Query: 514 CSNEILSISAMLSV-PNCFVRPREAQKAADEAK 545
C + ILSI+A LS + FV ++ Q D K
Sbjct: 1110 CLSPILSIAAFLSCCKSPFVYAKDEQNV-DRVK 1141
Score = 340 (124.7 bits), Expect = 3.6e-65, Sum P(2) = 3.6e-65
Identities = 82/236 (34%), Positives = 130/236 (55%)
Query: 40 NSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIP 99
+SL + K Q+Y ++L+ R +LP+ + K++ LQ LK V+++ GETGSGKTTQ+P
Sbjct: 572 SSLKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVP 631
Query: 100 QFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEV-GYSIRFEDCS 158
QF+L+ D+ I CTQP E V Y +R ++
Sbjct: 632 QFILD--DMIDSGHGGYCNIICTQPRAITVAQRVADERCEPPPGFDNSVVAYQVRHQNAR 689
Query: 159 SARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNR---- 214
S +T L + T G+LLR+ + D L+ I++DE HER+L D L +LK +++ +
Sbjct: 690 SDKTRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDN 749
Query: 215 --PDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEP-ERD-YLEAA 266
P LK+++MSAT++A +F YF P++ GR HPV ++ ++ ER YL A+
Sbjct: 750 ALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLAS 805
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 414 (150.8 bits), Expect = 6.3e-65, Sum P(2) = 6.3e-65
Identities = 111/344 (32%), Positives = 176/344 (51%)
Query: 272 QIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIF 331
++ + + SG IL+FL G EI AC M + + V+PL+++L Q+K+F
Sbjct: 880 ELSLAQKSGGILIFLPGVAEINRAC--------GMLRSLNCLHVLPLHASLETKEQRKVF 931
Query: 332 EXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSP 391
RK+VV+TN+AETS+TID I+ V+D G K+ Y+ + L +
Sbjct: 932 -------VPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETF 984
Query: 392 ISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 451
S A+ QR GRAGR Q G+C++LYT K + + + PE+ R L L+++ +GI
Sbjct: 985 ASLAACKQRRGRAGRVQAGECYKLYTRK-LESQMAERPEPEMRRVPLEQLCLSVRAMGIA 1043
Query: 452 DLVHFDFMDPPAPET--LMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVES 509
D+ F P PE + A+ +L +G LD + LT +G +++ P D + K++V
Sbjct: 1044 DVRGFLARAPTPPEAAAVEGAITMLRRMGCLDGE-ELTALGRQLAAIPADLRCGKLMVYG 1102
Query: 510 PKYNCSNEILSISAMLSVPN-CFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN 568
+ C + +S++A+LS FV P + + A EA+ARF DGD LT L + A+
Sbjct: 1103 AVFGCLEDCVSVAALLSSGRGVFVSPPDKRDQAREARARFAAGDGDLLTDLRAFQAWDAM 1162
Query: 569 NEDPS--------WCYDNFVNHRALKSADNVRQQLVRIMARFNL 604
DPS +C DNF+++ L + R Q + L
Sbjct: 1163 MRDPSVQQRHVRSFCDDNFLSYLTLSDVASARTQYFTSLVELGL 1206
Score = 331 (121.6 bits), Expect = 6.3e-65, Sum P(2) = 6.3e-65
Identities = 84/256 (32%), Positives = 137/256 (53%)
Query: 16 DETSVSAKL-VKTNGVGP-GAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEE 73
D+T++S ++ + P + N +++ N W + + Y ++L +R+ LP W ++E
Sbjct: 582 DKTTLSTQIRARRKQRRPKNIVWNPDSASKNEWLRRQETPEYRKMLGQRQKLPAWLLRDE 641
Query: 74 FLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXX 133
++ + +QV I+ GETGSGK+TQ QF+L+ D+ I TQP
Sbjct: 642 IVRTVAEHQVTIIAGETGSGKSTQSVQFILD--DLYGRGLGHAANILVTQPRRISALGLA 699
Query: 134 XXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMT------DPLLERYKV 187
+E +G+EVGY IR E + +T + ++T G+LLR D + V
Sbjct: 700 DRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVSGGRVEDVVASLADV 759
Query: 188 --IVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY--GAPL--M 241
+V+DE HER+L TD L ++++VLK R DLKLV+MSATL++ F YF G + +
Sbjct: 760 SHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASYFVQDGIRVGQV 819
Query: 242 KVPGRLHPVEIFYTQE 257
++ GR PV +Y +
Sbjct: 820 EIAGRTFPVTDYYLDD 835
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 403 (146.9 bits), Expect = 7.1e-65, Sum P(3) = 7.1e-65
Identities = 101/306 (33%), Positives = 167/306 (54%)
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RKIV++TNIAETS+TID +VYVID G K+ ++ + + ++ +SKA+A QR GRAG
Sbjct: 525 RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAG 584
Query: 406 RTQPGKCFRLYT--EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDP 461
R QPG C+ LY S +D Q PEILR+ L L +K L + + +F MDP
Sbjct: 585 RVQPGHCYHLYNGLRASLLDDYQ---LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDP 641
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
P+ E + +++ L L ALD LT +G ++ P++P + KM++ + C + +L+I
Sbjct: 642 PSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTI 701
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGH-IDGDHLTLLNVYHAYKQNNE-----DPSWC 575
+A LS + FV P +K AD + DHLT++N + +++ + +C
Sbjct: 702 AASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYC 761
Query: 576 YDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAMLAGYF 629
++ F++ L+ N++ Q + A F N K ++ NS + + I+ + AG +
Sbjct: 762 WEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKI-IKAVICAGLY 820
Query: 630 MQVAHL 635
+VA +
Sbjct: 821 PKVAKI 826
Score = 327 (120.2 bits), Expect = 7.1e-65, Sum P(3) = 7.1e-65
Identities = 77/215 (35%), Positives = 113/215 (52%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ L+ K RY E+ R+ LP + ++E + ++ +QV ++ GETG GKTTQ+
Sbjct: 175 DQQLLEDLRKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQV 234
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGE--EVGYSIRFED 156
QF+L+ IE + I CTQP E + G GY IR +
Sbjct: 235 TQFILDDY-IER-GKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQS 292
Query: 157 -CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP 215
+ + Y T G++L+ +D L IVLDE HER L +DVL ++K++L RP
Sbjct: 293 RLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRP 352
Query: 216 DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPV 250
DLK+++MSATL AEKF YF P++ +PG PV
Sbjct: 353 DLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 387
Score = 64 (27.6 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 571 DPSWCYDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAM 624
+ +C++ F++ L+ N++ Q + A F N K ++ NS + + I+ +
Sbjct: 757 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKI-IKAVI 815
Query: 625 LAGYFMQVA----HLERTGQYLTV--KDNQVVHLHPSNCLDHKPE----WVIYNEYVLTS 674
AG + +VA +L + + + V K + +V +HP + + E W+IY+ + TS
Sbjct: 816 CAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTS 875
Query: 675 RNFIRTVTDV 684
++ T+V
Sbjct: 876 SIYLYDCTEV 885
Score = 53 (23.7 bits), Expect = 7.1e-65, Sum P(3) = 7.1e-65
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 250 VEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQ 309
+E+ + + + + A IR +V + E G ILVFL G + I + ++ D
Sbjct: 456 MEMIDDDKVDLNLIAALIRHIV---LEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDT 512
Query: 310 VGPV-KVVP 317
+G V K P
Sbjct: 513 IGQVFKKTP 521
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 667 (239.9 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 184/608 (30%), Positives = 311/608 (51%)
Query: 53 QRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLE-GVDIETP 111
QR ++ + +++LP+ + +++ + L ++V+I+ G+TG GK+TQ+PQ++ + G
Sbjct: 134 QRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGY----- 188
Query: 112 DRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGM 171
IACTQP E+ G V + IRFE + T + ++T+G+
Sbjct: 189 -----RSIACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGL 243
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLR+ L++Y ++LDE HER L D L G+ K +L+ RP LKL++MSAT+ E F
Sbjct: 244 LLRQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELF 303
Query: 232 QGYF--YGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVV--QIHMCEPSGDILVFLT 287
GYF GA L++VPGRL P+++ Y P + L+A T Q + +P+ + V
Sbjct: 304 HGYFGEEGARLVQVPGRLFPIKLRYLPPPALE-LKAGQATSKRSQRNRIDPAPFVQVLSL 362
Query: 288 GEEEIEDACR-KITKEITNMGDQVGPVKVVPLYST-------LPPAMQQKIFEXXXXXXX 339
+++ + R + ++ + + V+ V Y+T LP Q I +
Sbjct: 363 IDQQYPTSERGDVLIFVSGVNEIESVVEAVHEYATEQTHWLVLPLHSGQAIADQSKVFDY 422
Query: 340 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 399
RK +VSTNIAETSLT+DG+ +V+D G K+ ++ + + L +SK+SA Q
Sbjct: 423 APEGM-RKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQ 481
Query: 400 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM 459
R GRAGRT PG CFRLYT + +N + PEI R L +L + +G+ D+ F F+
Sbjct: 482 RKGRAGRTGPGVCFRLYTAEQYNA-FEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFI 540
Query: 460 DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEIL 519
+ P E + + + L AL + +T +G ++ P++ + KML+ + ++L
Sbjct: 541 EAPETERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLL 600
Query: 520 SISAMLSVPNCFV-RPREAQKAADEAKA-RFGHIDGDHLTLLNVYHAYKQ--NNEDPS-- 573
+++AMLSV N R Q+ E ++ H GD TL+ +Y+ + Q D +
Sbjct: 601 TLAAMLSVQNPLTNRAHTDQRCVRERESLESDH--GDLFTLVRLYNVWVQLKMRRDGTRQ 658
Query: 574 WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVA 633
WC + + +RQQ RI+ + + S D +S+ + +A G Q+
Sbjct: 659 WCRRLGIEEQRFYEVTKLRQQFQRILESCGMVVAS-DSDSQ--LTSAERATRHGELRQLK 715
Query: 634 HLERTGQY 641
++R ++
Sbjct: 716 AMKRRQRF 723
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 389 (142.0 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 112/373 (30%), Positives = 200/373 (53%)
Query: 246 RLHPVEIFYTQEP-ERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEIT 304
+L+ ++I Q+ D +E+ I +V + + ILVF+ G +I + C ++ K I+
Sbjct: 864 KLNQLKISIDQKRINLDVVESLILHLVN-GVLKKDKSILVFVPGLSDILELCSRLGKPIS 922
Query: 305 NMGDQVGP-VKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDG 363
+ + + VPL+S+L P QQK+FE K+V++TNIAETS+TI+
Sbjct: 923 TFTEAICQRIWCVPLHSSLSPKDQQKVFEKAPNGRV-------KVVIATNIAETSITIED 975
Query: 364 IVYVIDPGFAKQKVYNPRVRVESLLVSP-ISKASAHQRSGRAGRTQPGKCFRLYTEKSFN 422
+ V+D G Q +N + S++ SKAS QR+GRAGRT G CF+++T KS
Sbjct: 976 VEIVVDCGRVNQMTFNS-ITGNSVMSEEWTSKASCRQRAGRAGRTSSGLCFKVFT-KSME 1033
Query: 423 NDLQPQTYPEILRSNLANTVLTLK---KLGIDDLVHFDFM----DPPAPETLMRALEVLN 475
+ LQ Q PEILR++L L +K K + + DF+ +PP+ E + ++ L
Sbjct: 1034 SQLQDQDTPEILRTSLQQLCLHVKLFLKNNKNTTIQ-DFLNRAIEPPSSEQIQSSINELI 1092
Query: 476 YLGAL----DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCF 531
+ AL LT +G ++ P+D + KML+ + C + IL+I+A L+ + F
Sbjct: 1093 SIDALKINQQQQQELTPLGYHLASLPVDVYIGKMLLFGCIFRCLDPILTIAATLNYKSPF 1152
Query: 532 VRPREAQ-KAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS---WCYDNFVNHRALKS 587
+ P + + D+ + DH TL+N Y++++++ +D + +C +N+++ L++
Sbjct: 1153 LNPPDKTIRPMDKFSSPN---QSDHQTLINAYNSWRKSIQDGNEYQFCRENYLSIPTLRT 1209
Query: 588 ADNVRQQLVRIMA 600
+++ Q V I++
Sbjct: 1210 IQDLKLQFVEILS 1222
Score = 338 (124.0 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 76/207 (36%), Positives = 118/207 (57%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
+++KR+SLPV+++K+EFL+ L+ NQV+++ ETG GK+TQIPQ++LE + ++ +
Sbjct: 618 VIKKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILES--FISQEKGSEC 675
Query: 118 MIACTQPXXXXXXXXXXXXXEE-----MDVTIGEEVGYSIRFEDCSSARTVLKYLTDGML 172
I CTQP E ++ +IG VGY IR E S T L + T G+L
Sbjct: 676 NIVCTQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGIL 735
Query: 173 LREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQ 232
LR + + I++DE HER+ D L +L+E++ R DLK+++MSATL A++
Sbjct: 736 LRRILDVSNISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIA 795
Query: 233 GYFYGAP--LMKVPGRLHPVEIFYTQE 257
YF + +PG PV+ Y E
Sbjct: 796 NYFKCTDDSIFSIPGFTFPVKNIYINE 822
Score = 63 (27.2 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 29/126 (23%), Positives = 56/126 (44%)
Query: 566 KQNNEDPSWCYDNFVNHRALKSADNVRQQLVR--IMARFNLKLCSNDFNSRDYYVNIRKA 623
K NN C D FV + + ++++ + +++ + A K+ D+ Y A
Sbjct: 1246 KGNNYSND-CIDEFVGY--IYNSNSSKSKIITSVLCAGMYPKIARIDYPDAKYSQTASGA 1302
Query: 624 MLAGYFMQ-VAHLERTGQYLTVKDNQVVHLHPSNCLDHKPEWV----IYNEYVLTSRNFI 678
+ Y + + L + K + V +HP + + EWV IYN+ V TS+ F+
Sbjct: 1303 IKNKYSPESLLLLTKPPNCGPGKPLERVFIHPRSTNFKEGEWVYPFIIYNDKVKTSKLFL 1362
Query: 679 RTVTDV 684
+T++
Sbjct: 1363 HHITNL 1368
Score = 60 (26.2 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 13/50 (26%), Positives = 30/50 (60%)
Query: 37 NNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQ-KEEFLQVLKANQVII 85
NNNN+ N N + Y ++L +++ L + ++ K E+ +++K ++ +I
Sbjct: 570 NNNNNNNNNNNNNNNNYNYKKVLNEKEKLKINKELKNEYDRLIKVDKGVI 619
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 544 (196.6 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 155/507 (30%), Positives = 260/507 (51%)
Query: 47 NGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGV 106
+ K + Y I +KR LP+++Q+ ++ +K NQ+II++G+TG GKTTQIPQFV+E
Sbjct: 699 HNKRQTAEYKRIYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIE-- 756
Query: 107 DIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTV-LK 165
D+ I TQP E +G+ VGY IRF++ T L
Sbjct: 757 DMIDSGHAPYCNIVMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLL 816
Query: 166 YLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 225
T G+LL+ +D L + +DE HER + TD L +LK++L + +L++++MSAT
Sbjct: 817 VCTPGILLKRMYSDMKLHNVSHLFIDEVHERDIHTDFLLIILKKLLADNNNLRVILMSAT 876
Query: 226 LEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE-------PERDYLEAAIRTVVQIHMCEP 278
++ YF P++K+ H + ++ ++ P Y + V + +
Sbjct: 877 MDNSLVSAYFGTCPVIKLTSYHHIAQEYFLEDISKQLNDPTISYRDEQSDDVDHEMILQL 936
Query: 279 SGDIL--VFLTGEEEI-------EDACRKITKEITNMGDQV---GPVKVVPLYSTLPPAM 326
I+ V T E+ I ED + T+E+ + ++PL+S++ +
Sbjct: 937 IVHIVTKVSSTSEDSILIFLPGWEDISQ--TRELMRRHPMLRNENEFLILPLHSSVSMQL 994
Query: 327 QQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVES 386
Q K+FE RKIV+STNIAETS+TI+ +VYVID K K Y+ R +
Sbjct: 995 QAKVFEKPPPKI-------RKIVLSTNIAETSITINDVVYVIDSAKVKLK-YHETQRDLT 1046
Query: 387 LLVSPIS-KASAHQRSGRAGRTQP-GKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLT 444
L + + K+S QR GRAGR + G C+ + + +N L+ E+ R L L
Sbjct: 1047 LFQTVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRYNT-LEEFQLSEMRRMPLHELCLQ 1105
Query: 445 LKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQM 502
+K L + D++ F + ++PP +++ A+ +L LGAL+ + LT +G ++S P+DP++
Sbjct: 1106 VKVLVLGDVIGFLSEALEPPETKSIDNAINLLIDLGALNANQELTPLGLQLSFIPVDPRI 1165
Query: 503 SKMLVESPKYNCSNEILSISAMLSVPN 529
KM++ + C + IL+I++ + N
Sbjct: 1166 GKMIILGSYFRCLDPILTIASFSNQKN 1192
Score = 134 (52.2 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 43/166 (25%), Positives = 82/166 (49%)
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS---WCYDNFVNHRALKSADNVRQQ 594
Q+ + K + + DHL+ LN+++ + Q+ D + +C D F++ L+ V++Q
Sbjct: 1222 QQQPQQPKNLYPELQSDHLSFLNIFNGWLQSRMDGTEDQYCQD-FLSIPLLQQILKVKKQ 1280
Query: 595 L---VRIMARFNLKL----CSNDF-NSRDYYVNIRKAML-AGYFMQVAHLERTGQYLTVK 645
L + + N +L +N F N ++I +A++ +G F +A + ++ T+
Sbjct: 1281 LLSTINDLGIINAQLRDGFVNNSFFNENSNNLDIIRAIICSGLFPNIARQRKKREFKTLS 1340
Query: 646 DNQVVHLHPSNC-------LDHKPEWVIYNEYVLTSRNFIRTVTDV 684
+N LHPS+ L+ K WVI+ E T FI+T+T +
Sbjct: 1341 EN--TFLHPSSIVYNLFQELNPKENWVIFEEKFKTKLTFIKTITRI 1384
Score = 47 (21.6 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 25 VKTNGVGPGA-MMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFL 75
+ N + G +NNNN N N YS I +++ P+ QQ++ L
Sbjct: 171 INNNIINSGLNSLNNNN---NNNNNNNYSGLENNINNYQQTPPILQQQQPLL 219
Score = 42 (19.8 bits), Expect = 0.00074, Sum P(2) = 0.00073
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 37 NNNNSLINRWNGKPYSQRYYE 57
NNNN+ N N Y YY+
Sbjct: 1204 NNNNN--NNNNNNSYYNNYYQ 1222
Score = 41 (19.5 bits), Expect = 8.0e-64, Sum P(3) = 8.0e-64
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 31 GPGAMMNNNNSLINRWNGKPYS 52
G N NNS +N+ K Y+
Sbjct: 84 GNSVFGNKNNSYLNKGGNKVYN 105
Score = 41 (19.5 bits), Expect = 8.0e-64, Sum P(3) = 8.0e-64
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 21 SAKLVKTNGVGPGAMMNNNNSLINRWNG 48
S KLV+ G+ + N+ L++ NG
Sbjct: 487 SKKLVQQKGIRSSCLEFENSCLLSHSNG 514
Score = 39 (18.8 bits), Expect = 1.3e-63, Sum P(3) = 1.3e-63
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 28 NGVGPGAMMNNNNSLINRWNGKPYSQRYY 56
N G + NNNN+ N N Q Y
Sbjct: 137 NNQGQTSYNNNNNNSNNNNNNNNQGQTSY 165
Score = 37 (18.1 bits), Expect = 2.1e-63, Sum P(3) = 2.1e-63
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 36 MNNNNSLINRWNGKPYSQRY 55
+NNNN+ N N +Q Y
Sbjct: 284 INNNNNNNNNNNNNNNNQNY 303
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 403 (146.9 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 101/306 (33%), Positives = 167/306 (54%)
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RKIV++TNIAETS+TID +VYVID G K+ ++ + + ++ +SKA+A QR GRAG
Sbjct: 531 RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAG 590
Query: 406 RTQPGKCFRLYT--EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDP 461
R QPG C+ LY S +D Q PEILR+ L L +K L + + +F MDP
Sbjct: 591 RVQPGHCYHLYNGLRASLLDDYQ---LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDP 647
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
P+ E ++ ++ L L ALD LT +G ++ P++P + KM++ + C + +L+I
Sbjct: 648 PSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTI 707
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGH-IDGDHLTLLNVYHAYKQNNE-----DPSWC 575
+A LS + FV P +K AD + DHLT++N + +++ + +C
Sbjct: 708 AASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYC 767
Query: 576 YDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAMLAGYF 629
++ F++ L+ N++ Q + A F N K ++ NS + + I+ + AG +
Sbjct: 768 WEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKI-IKAVICAGLY 826
Query: 630 MQVAHL 635
+VA +
Sbjct: 827 PKVAKI 832
Score = 329 (120.9 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 77/215 (35%), Positives = 113/215 (52%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ L+ K RY E+ R+ LP + ++E + ++ +QV ++ GETG GKTTQ+
Sbjct: 181 DQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQV 240
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGE--EVGYSIRFED 156
QF+L+ IE + I CTQP E + G GY IR +
Sbjct: 241 TQFILDNY-IER-GKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQS 298
Query: 157 -CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP 215
+ + Y T G++L+ +DP L IVLDE HER L +DVL ++K++L R
Sbjct: 299 RLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS 358
Query: 216 DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPV 250
DLK+++MSATL AEKF YF P++ +PG PV
Sbjct: 359 DLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 393
Score = 64 (27.6 bits), Expect = 4.0e-28, Sum P(3) = 4.0e-28
Identities = 30/130 (23%), Positives = 62/130 (47%)
Query: 571 DPSWCYDNFVNHRALKSADNVRQQLVRIM--ARF----NLKLCSNDFNSRDYYVNIRKAM 624
+ +C++ F++ L+ N++ Q + A F N K ++ NS + + I+ +
Sbjct: 763 EKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKI-IKAVI 821
Query: 625 LAGYFMQVA----HLERTGQYLTV--KDNQVVHLHPSNC----LDHKPEWVIYNEYVLTS 674
AG + +VA +L + + + V K + +V +HP + D W+IY+ + TS
Sbjct: 822 CAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTS 881
Query: 675 RNFIRTVTDV 684
++ T+V
Sbjct: 882 SIYLYDCTEV 891
Score = 47 (21.6 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 250 VEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
V++ E ++ L + + I + E G ILVFL G + I
Sbjct: 459 VDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNI 501
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 643 (231.4 bits), Expect = 5.3e-64, Sum P(2) = 5.3e-64
Identities = 181/600 (30%), Positives = 303/600 (50%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ L N W+ + S Y + +R+ LP W+ + + + ++ +QV+++ GETGSGK+TQ+
Sbjct: 551 SEKLCNNWSERVKSPSYQLKVREREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQV 610
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
QF+L+ + + ++ + ++ CTQP E D T+G+EVGYS+ E
Sbjct: 611 VQFILDHY-LSSGEKDLQTVV-CTQPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSI 668
Query: 159 SARTVLKYLTDGMLLREAMTDPL--LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD 216
S T+L++ T G+LLR L L +V+DE HER++ D+L LLK V+ P+
Sbjct: 669 SKETLLEFCTTGLLLRRIQQHGLGFLSTLSCVVVDEVHERSIENDILLTLLKLVISRIPN 728
Query: 217 LKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE--------------PER-- 260
LK+++MSAT+ ++ F+ YF A + + GR P++ +Y ++ P R
Sbjct: 729 LKVILMSATVNSDTFKYYFGNAGHLHIHGRTFPIKDYYIEDFAPKLNEDDDEEDVPRRKK 788
Query: 261 -----DY-LEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVK 314
DY L + + + + + SG ILVFL G I R+I + G + +
Sbjct: 789 KEYEIDYHLISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIKSKD---GSKF---E 842
Query: 315 VVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAK 374
V+PL+++L + Q++ F+ RKI+ +TNIAETS+TID +V VID G K
Sbjct: 843 VLPLHASLNTSEQRRCFKTYTK---------RKIICATNIAETSITIDDVVAVIDSGRVK 893
Query: 375 QKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEIL 434
Q Y+ + + + S+A+ QR GRAGR + G C++LYT + QT PE+L
Sbjct: 894 QIDYDVERDLVTFKETWASRAACQQRRGRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVL 953
Query: 435 RSNLA----NTVLTLKKLGI-------DDLVHF--DFMDPPAPETLMRALEVLNYLGALD 481
R+ L+ N V +K+ + F +DPP T+ AL+ L +GAL
Sbjct: 954 RTALSQVCLNVVPLVKRFSSAGNSVNQGSIKKFMNSLIDPPNDATVDLALKKLIQVGALT 1013
Query: 482 DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAA 541
+LT +GE + P+D ++ K+LV + L+I+A+LS + F+ EA++
Sbjct: 1014 VSEDLTGLGEYLVSLPIDLKLGKLLVFGSIFGYLEPALTITAILSTKSPFLGDDEAREIR 1073
Query: 542 DEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS------WCYDNFVNHRALKSADNVRQQL 595
+ +G + D VYH + + E WC + +++ L+ R +L
Sbjct: 1074 SKQSQGWGDVLAD----ARVYHNWLEILETRGVKKTVQWCEEMHLHYTTLQQIRQNRNEL 1129
Score = 49 (22.3 bits), Expect = 5.3e-64, Sum P(2) = 5.3e-64
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 645 KDNQVVHLHPSNCLD-HKPE-----WVIYNEYVLTSRNFIRTVTDV 684
++NQ + +HPS+ + + P +V Y + V T++ F+R T +
Sbjct: 1202 QNNQRLFIHPSSTMFVNSPNASRCTFVAYEQKVETTKPFLRNCTPI 1247
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 390 (142.3 bits), Expect = 2.3e-63, Sum P(2) = 2.3e-63
Identities = 117/396 (29%), Positives = 194/396 (48%)
Query: 255 TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVK 314
T +PE + ++ + +I G ILVFL G EEI K+ +
Sbjct: 551 TIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDD--RFFAHSAKFI 608
Query: 315 VVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAK 374
++ L+S +P Q+K+F RKIV++TNIAE+++TID +VYVID G K
Sbjct: 609 ILCLHSRVPAEEQKKVFNRPPRGC-------RKIVLATNIAESAVTIDDVVYVIDSGRMK 661
Query: 375 QKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEIL 434
+K Y+P V +L S +SKA+A QR+GRAGR Q G C+ LY+ K L PE++
Sbjct: 662 EKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYS-KLRAASLPEYRVPEVM 720
Query: 435 RSNLANTVLTLKKL----GIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMG 490
R + L +K L ++D + MDPP +++ AL +L +GAL + LTE+G
Sbjct: 721 RMPVDELCLQVKMLDPNCNVNDFLQ-KLMDPPVAQSIENALIILKDIGALTPEEELTELG 779
Query: 491 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA--QKAADEAKARF 548
+K + P+ P++SKM+ + NC + L ++ + F P +K A AK
Sbjct: 780 QKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHEL 839
Query: 549 GHIDGDH---LTLLNVYHAYKQ---NNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARF 602
+ GDH L + + +K + + +C F++ +K D++ ++L + R
Sbjct: 840 ASLYGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRH 899
Query: 603 NL--KLCSN-DFNSRDYYVNIRKAMLAGYFMQVAHL 635
+ SN N+ D + +R + G + + +
Sbjct: 900 GVIPSSSSNCSLNAHDPGI-LRAVIAVGLYPMLGRM 934
Score = 344 (126.2 bits), Expect = 2.3e-63, Sum P(2) = 2.3e-63
Identities = 74/224 (33%), Positives = 125/224 (55%)
Query: 37 NNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTT 96
NN SL +R + + + EI E R LP+ ++ + +++NQV+++ GETG GKTT
Sbjct: 192 NNVVSLSSRLKKE---RHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTT 248
Query: 97 QIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFED 156
Q+PQ++L+ + ++ I CTQP E TIG VGY +R +
Sbjct: 249 QVPQYLLDHM---WHSKKEACKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQS 305
Query: 157 CSSARTVLKYLTDGMLLREAM---TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN 213
+ + + T+G+LLR + + + I++DE HER +D + +L+++L +
Sbjct: 306 EGGRESSVVFCTNGILLRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPS 365
Query: 214 RPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
P L+L++MSATL+AE+F YF G P+++VPG +PV F+ +
Sbjct: 366 NPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDD 409
Score = 37 (18.1 bits), Expect = 6.0e-26, Sum P(2) = 6.0e-26
Identities = 20/77 (25%), Positives = 31/77 (40%)
Query: 388 LVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKK 447
+ S +S S Q S + QP + S +D+ P T P LR + NT K
Sbjct: 1109 IASVLSYDSLAQSSVQTVAVQP--ITSVVDATSPRDDI-PSTNPNELREHDPNTTPMGSK 1165
Query: 448 LGIDDLVHFDFMDPPAP 464
L + + + M+ P
Sbjct: 1166 LELANKLGLGNMEESLP 1182
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 408 (148.7 bits), Expect = 5.2e-63, Sum P(3) = 5.2e-63
Identities = 108/323 (33%), Positives = 178/323 (55%)
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGD-QVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXX 340
ILVFL G EI R++ E+ + Q G + + L+S++ Q+K F
Sbjct: 922 ILVFLPGMAEI----RRLNDELLSEPTFQHGWI-IHALHSSIASDEQEKAF-------VV 969
Query: 341 XXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 400
RKIV++TNIAET +TI I VID G K ++ R ++ L+ + IS+A+A QR
Sbjct: 970 PPDGMRKIVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQR 1029
Query: 401 SGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK--KLGIDDLVHFDF 458
GRAGR Q G CF ++T+ +N L Q PE+LR +L + VL +K KLG + +
Sbjct: 1030 RGRAGRVQRGICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEVEPTLLEA 1089
Query: 459 MDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEI 518
+DPP+ + + RA++ L + AL NLT +G+++++ PLD + K+++ + C +
Sbjct: 1090 LDPPSSKNIRRAIDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAA 1149
Query: 519 LSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP-----S 573
+SI+A+LS + FV + + + F D D LT+ N Y A+K+ P +
Sbjct: 1150 ISIAAILSCKSPFVNTMGSNAQKEAVRLGFRRGDSDLLTVYNAYCAWKRTRSTPGANEYA 1209
Query: 574 WCYDNFVNHRALKSADNVRQQLV 596
+C NF++ + L + ++V+ QL+
Sbjct: 1210 FCRKNFLSPQTLLNIEDVKLQLM 1232
Score = 325 (119.5 bits), Expect = 5.2e-63, Sum P(3) = 5.2e-63
Identities = 74/225 (32%), Positives = 119/225 (52%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
N L W K + + +++ R LP+W K E L L +++ +I+ ETGSGK+TQI
Sbjct: 619 NEQLSQIWMEKASTPAFQYMVQSRMQLPIWTFKNEILNTLNSHRALIICSETGSGKSTQI 678
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEM-----DV-TIGEEVGYSI 152
P F+LE + R I T+P EE+ DV T +G+++
Sbjct: 679 PSFILEHEMLSG----RPCKIYVTEPRRISAISLARRVSEELGESKNDVGTSRSLIGFAV 734
Query: 153 RFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLK 212
R E S T L + T G+++R + +VLDE HER++ +D L +L+ +++
Sbjct: 735 RLESKVSPATRLVFATTGVVVRMLERPDDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQ 794
Query: 213 NRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
R DLKL++MSAT++A +F Y G P++ +PGR PVE + ++
Sbjct: 795 KRQDLKLILMSATVDANRFSTYLGGVPVLNIPGRTFPVETKFLED 839
Score = 40 (19.1 bits), Expect = 5.2e-63, Sum P(3) = 5.2e-63
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 635 LERTGQ-YLTVKDNQVVHLHPSN 656
L R G+ + + +NQ V LHP++
Sbjct: 1292 LTREGKGWRNIANNQSVTLHPTS 1314
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 133/277 (48%), Positives = 182/277 (65%)
Query: 20 VSAKLVKTNGVGPGAMMNNNNSLINRW-------NGKPYSQR-YYEILEKRKSLPVWQQK 71
V + + N G G M N+ I W N Y ++ I+E+R+SLP+++ K
Sbjct: 426 VDGRQIAANMRGIGMMPND----IPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLK 481
Query: 72 EEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXX 131
E+ +Q + NQ++I++GETGSGKTTQI Q++ E R K I CTQP
Sbjct: 482 EQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS----RGK--IGCTQPRRVAAMS 535
Query: 132 XXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLD 191
EE +G+EVGY+IRFEDC+S TV+KY+TDGMLLRE + DP L +Y +I+LD
Sbjct: 536 VAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLD 595
Query: 192 EAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVE 251
EAHERT+ TDVLFGLLK+ ++ R D+KL+V SATL+A KF YFY AP+ +PGR +PVE
Sbjct: 596 EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVE 655
Query: 252 IFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTG 288
I YT+EPE DYL+A++ TV+QIH+ EP G+ +V + G
Sbjct: 656 ILYTKEPETDYLDASLITVMQIHLTEPPGEWIVMIHG 692
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 381 (139.2 bits), Expect = 9.4e-63, Sum P(2) = 9.4e-63
Identities = 121/412 (29%), Positives = 211/412 (51%)
Query: 279 SGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXX 338
+G ++V+L G ++ ++ + +Q+ ++ L+S + + Q+K+F
Sbjct: 460 AGAVIVYLPGYSDMTSLLARLESSLPR--EQI---TIILLHSQVDNSEQRKVFRTYPGVR 514
Query: 339 XXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAH 398
KI++STNI +TS+TI ++YVID G AK K Y+ + L ++ IS+A A
Sbjct: 515 L-------KIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAK 567
Query: 399 QRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDF 458
QR+GRAGR G C+RLY + T PEI+R L + + L KL D +F
Sbjct: 568 QRAGRAGRVCHGNCYRLYDNDRMAR-MNLYTIPEIMRRTL-DEICLLTKLAAPDKKIENF 625
Query: 459 M----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNC 514
+ D P + +M++ L LG LD+ +T +G ++E PL Q+ K LV S C
Sbjct: 626 LALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRC 685
Query: 515 SNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI-DG--DHLTLLNVYHAYKQ-NNE 570
+ ++ I+A SV + FV E K + + +R DG D L ++ +Y + +
Sbjct: 686 LDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSLAVIKLYEEFTNLKRK 745
Query: 571 D-PSWCYDNFVNHRALK----SADNVRQQLVRIMARFN---LKLCSNDFNSRDYYVNIRK 622
D +C NF+ A++ +A +R + RI RF+ +L S+ FN+ D + IR
Sbjct: 746 DIGDFCERNFICRNAMEMFVSAASTLRDTVYRIF-RFSEASARLASS-FNN-DTNM-IRL 801
Query: 623 AMLAGYFMQVAHLERTGQ-YLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVL 672
A+ AG + ++A+++R + L + + +V + S+CL K + + +E++L
Sbjct: 802 ALTAGLYPKLAYMDRENKNQLVAEGDPLVQVSRSSCLRGKKKQKDLASEWIL 853
Score = 341 (125.1 bits), Expect = 9.4e-63, Sum P(2) = 9.4e-63
Identities = 79/210 (37%), Positives = 113/210 (53%)
Query: 50 PYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE 109
P S R I +R+SLP+++Q+E L VL+ +QV+I+ G TGSGK+TQ+PQ++LE
Sbjct: 194 PQSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWA--- 250
Query: 110 TPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTD 169
+ R + I +QP +E G VGY+IR S+ TVL T
Sbjct: 251 -AEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTS 309
Query: 170 GMLLREAMTDP--LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLE 227
G LLR D + +++DEAHER L TD L K L+ P L+LV+MSAT++
Sbjct: 310 GCLLRALAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMD 369
Query: 228 AEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
E YF G +M V GR V I++ ++
Sbjct: 370 LEALSNYFGGGTVMDVEGRSFEVSIYHLED 399
Score = 41 (19.5 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 252 IFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
+ + P+ D + I ++ +C P D+L + G E
Sbjct: 118 VLFISRPQSDGQQQYILCNTKLDICPPLLDVLGQMAGNVE 157
Score = 38 (18.4 bits), Expect = 6.5e-31, Sum P(2) = 6.5e-31
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 19 SVSAKLVKTNGVGPGAMMNNN 39
SVS ++ K G PG + N
Sbjct: 271 SVSERISKERGEAPGTTVGYN 291
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 386 (140.9 bits), Expect = 1.5e-62, Sum P(3) = 1.5e-62
Identities = 98/285 (34%), Positives = 154/285 (54%)
Query: 41 SLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQ 100
++INR K +R EI + R LP++ ++ ++ + N V ++ GETGSGKTTQIPQ
Sbjct: 214 TVINR--KKVIVERSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQ 271
Query: 101 FVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSA 160
F+ E + +I T+P E+ +EV Y IR+E S
Sbjct: 272 FLYEAGYASEGE-----LIGITEPRRVAAIAMAQRVGVELAKP--DEVSYQIRYEGTRSE 324
Query: 161 RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVL----KNRPD 216
T + ++TDG+L++E D +L++Y VI++DEAHER++ +DVL G+L ++ K
Sbjct: 325 TTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARP 384
Query: 217 LKLVVMSATLEAEKF--QGYF-YGAP-LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQ 272
L+LV+MSATL + F + F P ++KV R PV + + + DY+ +A R +
Sbjct: 385 LRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCR 444
Query: 273 IHMCEPSGDILVFLTGEEEIEDACRKITKE--ITNMGDQVGPVKV 315
IH P G ILVF+TG+ E++ K+ K + D+ G V V
Sbjct: 445 IHETLPPGAILVFVTGQHEVKQLITKLKKRYPVVYETDKNGEVLV 489
Score = 314 (115.6 bits), Expect = 1.5e-62, Sum P(3) = 1.5e-62
Identities = 85/258 (32%), Positives = 130/258 (50%)
Query: 277 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXX 336
E D F G+ ++ D K+ I P+ +PLYS L Q+++F+
Sbjct: 541 EAFDDYEEFENGDGDLSDG--KVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPA 598
Query: 337 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
R V+STN+AETSLTI G+ YVID GF K+++Y+ V V IS+AS
Sbjct: 599 GM-------RLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQAS 651
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
QR+GRAGR G +RLY+ + D PEIL VL LK + I +V+F
Sbjct: 652 GDQRAGRAGRISAGHAYRLYSSAVYQ-DFVKFADPEILSKPADQLVLHLKSMNIVKVVNF 710
Query: 457 DFMDPPAPETLMRALEVLNYLGALDD-------DGNLTEMGEKMSEFPLDPQMSKMLVES 509
F P + L A + L LGAL + + +T++G+ ++ FPL P +K + +
Sbjct: 711 PFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMA 770
Query: 510 PKYNCSNEILSISAMLSV 527
++N + + + ++LSV
Sbjct: 771 DQHNLMSHAILLISLLSV 788
Score = 67 (28.6 bits), Expect = 1.5e-62, Sum P(3) = 1.5e-62
Identities = 38/161 (23%), Positives = 69/161 (42%)
Query: 553 GDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIM----ARFNLKLCS 608
GD L++ +Q + C + +AL A +RQQL I+ + +
Sbjct: 830 GDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEARKLRQQLTNIVNASCKKEHAAALD 889
Query: 609 NDFNS-RDYYVNI-RKAMLAGYFMQVAH-LERT--------GQYLTVKDNQVVHLHPSNC 657
+D D + R+ ++A + ++A ++R+ G Y T V + P +
Sbjct: 890 SDLPPPTDQQAQLLRQMVVASFSDRLARRVDRSVGQEEVQKGAYETTLIKGHVFIDPCSV 949
Query: 658 L-DHKPEWVIYNEYV-LTSRNFIRTVTDVRGEWLIDIAPHY 696
+ +PE+VIY E V + + + +V V EWL +A Y
Sbjct: 950 VFTEEPEFVIYQELVQVNEKKLMTSVCAVDKEWLSRLAESY 990
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 380 (138.8 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 117/409 (28%), Positives = 204/409 (49%)
Query: 279 SGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXX 338
+G I+VFL G EI C + + +N D + V+PL+S L P Q+++F+
Sbjct: 863 NGSIIVFLPGVGEINKCCNLLANK-SNEADFM----VLPLHSALTPEDQKRVFKKYHGK- 916
Query: 339 XXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAH 398
RK+VVSTNIAETS+TID V ID G AK YNP+ L+ S ISKA
Sbjct: 917 -------RKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVK 969
Query: 399 QRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF-- 456
QR GRAGR + G ++L+++ + ND+ PEI R L + L++K +GI D+ F
Sbjct: 970 QRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLS 1029
Query: 457 DFMD-PPAPETLMRALEVLNYLGALDD-DGNLTEMGEKMSEFP-LDPQMSKMLVESPKYN 513
+D PP P L +A +L +G +D+ D +LT++G+ +S P +D + K+L+ +
Sbjct: 1030 TALDAPPLP-ALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFG 1088
Query: 514 CSNEILSISAMLSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY---KQNN 569
C++ + + ++L + F+ E ++ + ++ GD +L + Y K ++
Sbjct: 1089 CTDISVLLVSILGIGVLPFIGGFENREKIKKLLCKY-ESRGDLFAVLEIVRDYFKIKDSS 1147
Query: 570 EDPSWCYDNFVNHRALKSADNVRQQLVRIMAR-----FNLKLCS-NDFNSRDYYVNIRKA 623
+ DN +++ + + Q I+ + K+ S +D N + +I +A
Sbjct: 1148 IKRKYLRDNLLSYNKINEIKSSTAQYYSILKDVGFLPMDYKVGSISDLNRNERNFDILRA 1207
Query: 624 MLAG-YFMQVAHLERTG-QYLTVKDNQVVHLHPSNCLDHKPEWVIYNEY 670
+L G ++ +A ++ +YL+ V + + + W+ EY
Sbjct: 1208 ILTGAFYPHIARVQLPDVKYLSTSSGAVEKDPEAKMIKY---WIRSEEY 1253
Score = 344 (126.2 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 79/256 (30%), Positives = 134/256 (52%)
Query: 2 GTERKRKVSLFDVVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEK 61
G KR +S S S K KT + + + L + + S Y +
Sbjct: 546 GAINKRNISNGKRSINNSSSRKFTKTT-ISEDTL----SVLREEYTKRIKSSEYKSMQLV 600
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIAC 121
R+ LP W++++ + ++ N+V+++ GETGSGK+TQ+ QF+L+ + E D K I C
Sbjct: 601 REQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKGDFG-KTKIVC 659
Query: 122 TQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
TQP +E VT GEEVGY IR + + A T +K++T G+L+R
Sbjct: 660 TQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLLQNART 719
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLM 241
+ ++V+DE HER++ TD++ L+K +L +K+V+MSAT+ + F+ +F G
Sbjct: 720 MLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPGLATC 779
Query: 242 KVPGRLHPVEIFYTQE 257
+ GR P+ ++ ++
Sbjct: 780 HIEGRTFPITDYFLED 795
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 333 (122.3 bits), Expect = 4.0e-62, Sum P(3) = 4.0e-62
Identities = 76/212 (35%), Positives = 115/212 (54%)
Query: 50 PYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIE 109
P S+ E+ + R SLP + ++ L+ + + V+I+ G TG GKTTQ+PQF+L+ E
Sbjct: 166 PKSKCSKELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILD----E 221
Query: 110 TPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTD 169
+ + + + TQP E IG VGY +R + S TVL Y T
Sbjct: 222 AHENNKHVRVMVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTT 281
Query: 170 GMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA- 228
G+LLR +DP+ IV+DE HER + TD L L+E LK RPDLK+++MSAT+E
Sbjct: 282 GVLLRMLTSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGN 341
Query: 229 -EKFQGYF--YGAPLMKVPGRLHPVEIFYTQE 257
+ F YF + ++++ R V++FY +
Sbjct: 342 MQLFSNYFENHSMDVIRIESRAFDVKVFYLDQ 373
Score = 287 (106.1 bits), Expect = 4.0e-62, Sum P(3) = 4.0e-62
Identities = 85/274 (31%), Positives = 140/274 (51%)
Query: 252 IFYTQEPERDYLEAAIRTVVQIHMCEPS-GDILVFLTGEEEIEDACRKIT---KEITNMG 307
+FY + V+Q P G ILVFL G E+I+ + I + NM
Sbjct: 616 LFYGSSSNNSVDYVLLDQVIQYLADSPVFGTILVFLPGYEDIQQMLKAIDCWKNSLKNMK 675
Query: 308 DQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYV 367
+ + V+PL+S + IF+ RKI+++TNIAE S+TI+ +++V
Sbjct: 676 NVI----VLPLHSQMTSINHGDIFKSVPKDT-------RKIILATNIAEASITIEDVIFV 724
Query: 368 IDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQP 427
+D G K+K ++ ++ +L V PI++++A QRSGRAGR G C RLYTE+ +N+ P
Sbjct: 725 VDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAGRVANGYCIRLYTEQEYNS--MP 782
Query: 428 QTY-PEILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGAL-- 480
+T E+ R+ + + L K L +F+ +PP E++++A+ L +GA
Sbjct: 783 ETQIAEMKRAAIYDVTLHAKLFAPKTLKISEFLSLAPEPPEKESILQAITFLEQIGAFYT 842
Query: 481 -----DDDGN---LTEMGE-KMSEFPLDPQMSKM 505
D+ GN L E + SE P DP+++ +
Sbjct: 843 PIKIYDNSGNEEGLKNDEEAENSENPEDPELTDL 876
Score = 153 (58.9 bits), Expect = 4.0e-62, Sum P(3) = 4.0e-62
Identities = 36/127 (28%), Positives = 65/127 (51%)
Query: 482 DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRP-REAQKA 540
+D LT++G M+ PLDPQ+S+ML+ C I+++ A+L+ +V E +
Sbjct: 869 EDPELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDL 928
Query: 541 ADEAKARFGHID-GDHLTLLNVYHAY--KQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
+ K D DHL + + + + K N++ +C D+F+N ++ R+QL+R
Sbjct: 929 QSKMKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLR 988
Query: 598 IMARFNL 604
+ R L
Sbjct: 989 ELVRAKL 995
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 360 (131.8 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 83/220 (37%), Positives = 125/220 (56%)
Query: 46 WNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEG 105
W K S RY +L R LP+W +E+ L + +QV+I+ GETG GK+TQ+P F+LE
Sbjct: 672 WYDKSSSPRYQNMLRSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLE- 730
Query: 106 VDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEM-----DV-TIGEEVGYSIRFEDCSS 159
+ + I CT+P EE+ D+ T VGYSIR E +S
Sbjct: 731 ---HQLAQGKACKIYCTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTS 787
Query: 160 ARTVLKYLTDGMLLR--EAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 217
T L + T G+++R E D L +VLDE HER++ +D L +LK+++ R DL
Sbjct: 788 RETRLVFATTGIVMRMLEGSND--LRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDL 845
Query: 218 KLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
K+V+MSAT++A++F Y GAP++ VPGR PV++ + ++
Sbjct: 846 KVVLMSATVDADRFSNYLDGAPVLNVPGRTFPVQVNFLED 885
Score = 360 (131.8 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 100/328 (30%), Positives = 179/328 (54%)
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVK--VVPLYSTLPPAMQQKIFEXXXXXXX 339
ILVFL G EI R + + +GD+ V PL+ST+ Q+ F
Sbjct: 970 ILVFLPGIAEI----RTLNDLL--LGDRSFQQNWLVYPLHSTIATEEQEAAF-------L 1016
Query: 340 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 399
RKIV++TNIAET +TI + VID G ++ ++ R ++ L+ + IS+A+A Q
Sbjct: 1017 VPPHGMRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQ 1076
Query: 400 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK--KLG-IDDLVHF 456
R GRAGR Q G CF ++T+ + + Q PE+LR +L + + +K K+G I++ +
Sbjct: 1077 RRGRAGRVQQGLCFHMFTKYRHDAIMADQQTPEMLRLSLQDLAIRVKICKIGGIEETLS- 1135
Query: 457 DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
+DPP+ + + RA++ L + AL +LT +G +++ PLD + K+++ + C +
Sbjct: 1136 KALDPPSAKNIRRAIDALIDVRALTQGEDLTPLGNQLARLPLDVFLGKLILLGSIFKCLD 1195
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ--------N 568
++++A+LS + FV P + AD + F D D LT+ N Y ++K+ +
Sbjct: 1196 MAITVAAILSSKSPFVAPFGQRSQADTVRLGFRRGDSDILTVYNAYLSWKRVCLAATGNS 1255
Query: 569 NEDPSWCYDNFVNHRALKSADNVRQQLV 596
+++ +C NF++ + L + ++++ QL+
Sbjct: 1256 SQEFQFCRKNFLSQQTLANIEDLKGQLL 1283
Score = 41 (19.5 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 27/99 (27%), Positives = 42/99 (42%)
Query: 428 QTYP---EILRSNLANTVLTL-KKLGIDDLVHFDFMDPPAPETLMRALEVLNYL-GALDD 482
+T+P L + T T+ +K+ + LV D PE+ + E+L L G
Sbjct: 874 RTFPVQVNFLEDAVELTGYTIDQKVPQERLVEIDEDAEVEPESSSKT-ELLKSLKGYSTR 932
Query: 483 DGN-LTEMGEKMSEFPLDPQMSKMLVESPKY-NCSNEIL 519
N L +M E +F L Q+ + P Y + S IL
Sbjct: 933 TRNTLAQMDEYKIDFDLIVQLISRIASDPNYQDYSKAIL 971
Score = 40 (19.1 bits), Expect = 4.2e-28, Sum P(2) = 4.2e-28
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 100 QFVLEGVDIETPDRRRKMMIACT 122
QFV++ I TPD R+ T
Sbjct: 543 QFVIKMKSIATPDSRQSEAYVAT 565
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 388 (141.6 bits), Expect = 2.0e-60, Sum P(2) = 2.0e-60
Identities = 108/327 (33%), Positives = 180/327 (55%)
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXX 341
+LVFL G EI + + +++ + + L+STL A QQ +F
Sbjct: 906 VLVFLPGISEILRV-KSLIEDMPMFRNH-RKFCIYMLHSTLSSAQQQSVFNIPPKGC--- 960
Query: 342 XXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RKIV+STNIAET +TI + VID G ++ YN R + L + +SKA+A QRS
Sbjct: 961 ----RKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRS 1016
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTY--PEILRSNLANTVLTLKKLGIDDL--VHFD 457
GRAGR Q G C+ L+++ F +D Q +Y PEILR NL VL +K + D+ V
Sbjct: 1017 GRAGRVQEGICYHLFSK--FKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGK 1074
Query: 458 FMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNE 517
+DPP+ ++RALE L+ +GAL ++ LT++G+ +S+ P+D + K+LV Y C +
Sbjct: 1075 ALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDA 1134
Query: 518 ILSISAMLSVPNCFVRPREAQKAADEAKARFG--HIDGDHLTLLNVYHAYKQ------NN 569
SI AML++ + F + + + +A++A+ F + D + + Y A+++
Sbjct: 1135 ASSIVAMLTIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPLGP 1194
Query: 570 EDPSWCYDNFVNHRALKSADNVRQQLV 596
++ S+ + ++N AL ++++ QL+
Sbjct: 1195 DEDSFAKEKYLNLEALSMTESLKIQLL 1221
Score = 317 (116.6 bits), Expect = 2.0e-60, Sum P(2) = 2.0e-60
Identities = 72/222 (32%), Positives = 118/222 (53%)
Query: 41 SLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQ 100
+L+N+W + S+ + R LP +E + + +Q++I+ G+TG GK+TQIP
Sbjct: 607 TLLNKWRQQLESESAEKFKVFRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPA 666
Query: 101 FVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEM-----DVTIGEEVGYSIRFE 155
F+LE + + + I T+P +E+ E VGYS+R +
Sbjct: 667 FLLEN----STKNGKAVKIYVTEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLD 722
Query: 156 DCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRP 215
+ T L Y+T G LR +E +++DE HER++ +D+L + +LK P
Sbjct: 723 SKCTPLTPLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHP 782
Query: 216 DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
LK+++MSATL AEKFQ YF G+ L+ +PG+ +PV FY ++
Sbjct: 783 HLKIIIMSATLNAEKFQLYFEGSNLITIPGKTYPVHRFYLED 824
Score = 37 (18.1 bits), Expect = 5.2e-31, Sum P(2) = 5.2e-31
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 212 KNRPDLKLVVMSATLEAE 229
K DLK V+ +ATL A+
Sbjct: 499 KTFSDLKTVLPTATLAAD 516
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 617 (222.3 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 166/484 (34%), Positives = 259/484 (53%)
Query: 139 EMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTL 198
+ ++ I E G FE S +T L +LT+G+LLR+ D LLE+Y VI+LDE HER L
Sbjct: 141 QKELPIAERAG---EFETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHL 197
Query: 199 ATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRL-------HPVE 251
+D+L GLL+++ R DLKL++MSAT+ + F+GYF GAP+++VPGRL HP++
Sbjct: 198 TSDLLIGLLRDLCTKRDDLKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDVRWHPIK 257
Query: 252 IFYTQEPERDYL---EAAIRTVVQIHMCEPS---GDILVFLTGEEEIEDACRKITKEITN 305
F Q ++ + E ++ + I PS GD L+FL G EI + + + N
Sbjct: 258 QFIDQSDKKTHKIDPEPYLKILELIDKQFPSTQRGDALIFLNGVAEIS----MVAEHLKN 313
Query: 306 MGDQVGPVKVVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIV 365
+ ++ L+STL Q K+F+ RK ++STN+AETS+TIDGI
Sbjct: 314 YAELTNGWIILMLHSTLSVEEQDKVFDQAPVGI-------RKCILSTNVAETSVTIDGIR 366
Query: 366 YVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDL 425
+VID G + P + L +SKASA+QR GRAGRT PG C+RLY+++ F +
Sbjct: 367 FVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTGPGICYRLYSQEQFEK-M 425
Query: 426 QPQTYPEILRSNLANTVLTL--KKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD 483
T EI R +L L + LG+D F F++ P+ + L LEVL + L D
Sbjct: 426 DDFTVSEINRVSLQEMALKMISLNLGLDPRT-FPFIEKPSEDVLNEGLEVLKFQRVLRSD 484
Query: 484 -GN---LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQK 539
G+ LT +G +S+ P++ ++KMLV + +L+++A LSV + F +
Sbjct: 485 RGDILTLTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGLSVQSPFTNRSYREL 544
Query: 540 AADEAKARFGHIDGDHLTLLNVYHAY--KQNNEDPS--WCYDNFVNHRALKSADNVRQQL 595
E +A GD TL++++ + ++ E + W +N ++ L +R Q
Sbjct: 545 EIVERRASLTSPLGDPFTLISIFREWVLQKAFEGTARRWTMENGIDEHRLYEISKLRAQY 604
Query: 596 VRIM 599
+I+
Sbjct: 605 RQIL 608
>UNIPROTKB|Q05BE5 [details] [associations]
symbol:DHX33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 EMBL:CH471108 GO:GO:0004386 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC004148 UniGene:Hs.250456
HGNC:HGNC:16718 ChiTaRS:DHX33 EMBL:BC050409 IPI:IPI00789223
SMR:Q05BE5 Ensembl:ENST00000433302 UCSC:uc010clf.3
HOVERGEN:HBG082280 Uniprot:Q05BE5
Length = 483
Score = 570 (205.7 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 119/318 (37%), Positives = 183/318 (57%)
Query: 384 VESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVL 443
+E L V +SK A QR+GRAGR G C+RLYTE F T PEI R NLA+ +L
Sbjct: 162 LEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK-FDKMTVPEIQRCNLASVML 220
Query: 444 TLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDP 500
L + + +++ FDFM P+P+ + A+ L+ LGAL DD LT MG KM+ FPL+P
Sbjct: 221 QLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEP 280
Query: 501 QMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLN 560
+ +K ++ SPK++C+ EIL+I ++LSV + P ++ + +F +GDH+TLLN
Sbjct: 281 KFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLN 340
Query: 561 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI 620
+Y +K + WC +NFVN + + VR QL I + ++ + S SR ++
Sbjct: 341 IYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIAS----SRGDVESV 396
Query: 621 RKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIR 679
R+ + FM A L+ G Y T +Q V +HPS+ L H KP V+Y E + T++ ++R
Sbjct: 397 RRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMR 456
Query: 680 TVTDVRGEWLIDIAPHYY 697
+ + +WL + AP Y+
Sbjct: 457 DLCVIDAQWLYEAAPEYF 474
Score = 57 (25.1 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 49 KPYSQRYYEILE-KRKSLPVWQQKEEFLQVLKANQVIILVG 88
+P + Y E +E +R+SLP++Q + + L L+ +L+G
Sbjct: 57 QPSASPYPEAVELQRRSLPIFQARGQLLAQLRNLDNAVLIG 97
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 607 (218.7 bits), Expect = 4.2e-58, P = 4.2e-58
Identities = 171/557 (30%), Positives = 286/557 (51%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ SL+ W +R + ++ LPV ++ L ++ + V+++ G+TG GKTT+I
Sbjct: 440 SQSLLELW------RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRI 493
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
PQ +LE E R ++I TQP E+ T+ VG+ +R E
Sbjct: 494 PQLLLERYVTEGRGARCNVII--TQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKP 551
Query: 159 SART-VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 217
AR L + T G+LLR+ ++P LE +V+DE HER + TD L LLK + + P L
Sbjct: 552 PARGGALLFCTVGILLRKLQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPAL 611
Query: 218 KLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY----- 262
+LV+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 612 RLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESE 671
Query: 263 ----LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G +
Sbjct: 672 DECALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLI 727
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
+P++S +P Q+ IF+ RKIV++TNIAETS+TI+ IV+V+D G K+
Sbjct: 728 LPVHSNIPMMDQKAIFQQPPIGV-------RKIVLATNIAETSITINDIVHVVDSGLHKE 780
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
+ Y+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR
Sbjct: 781 ERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MAPFQVPEILR 839
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
+ L N VL K + + + +F+ D P + + A+ +L +G LD LT +G+
Sbjct: 840 TPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQ 898
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI 551
+++ DP+++K +V + + C + +L + + L+ + F + + D+ KA H
Sbjct: 899 RLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHD 957
Query: 552 DG-DHLTLLNVYHAYKQ 567
G DHL + +++
Sbjct: 958 SGSDHLAFVRAVSGWEE 974
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 360 (131.8 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 112/416 (26%), Positives = 198/416 (47%)
Query: 256 QEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
+E + +EA ++ I E G +LVFL G I + + G Q ++
Sbjct: 636 KETSFELIEALLK---YIETLEVPGAVLVFLPGWNLIYFMQKHLEMNPHFGGHQY---RI 689
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
+PL+S +P Q+++FE K+++STNIAETS+TI+ +V+V+D K
Sbjct: 690 LPLHSQIPREEQRRVFEPVPDGVT-------KVILSTNIAETSITINDVVFVLDSCKQKV 742
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
K++ + + SK + QR GRAGR +PG CF L + F L+ PEI R
Sbjct: 743 KLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEK-LETHMTPEIFR 801
Query: 436 SNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKM 493
+ L L++K L + + +F ++PP + ++ A L L ALD + LT +G +
Sbjct: 802 TPLHEVALSIKLLRLGGIGNFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRIL 861
Query: 494 SEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG 553
++ P++P++ KM++ +N + + +ISA P F+ E ++ + G
Sbjct: 862 AKLPIEPRLGKMMIMGCIFNVGDAVCTISAATCFPEPFIN--EGKRLGFVHRNFAGSRFS 919
Query: 554 DHLTLLNVYHAYKQ---NNEDPS--WCYDNFVNHRALKSADNVRQQLVRIMARFNLK--- 605
DH+ LL+V+ A+ + ED +C +N L+ + QL I+
Sbjct: 920 DHVALLSVFQAWDEVRVGGEDAEIRFCEHKRLNMPTLRMTWEAKVQLKEILVNVGFPEEC 979
Query: 606 LCSNDFNS--RDYYVNIRKAMLA-GYFMQVAHLERTGQYLTVKD-NQVVHLHPSNC 657
L + FN+ D +++ ++L G + V + + + LT + N ++H NC
Sbjct: 980 LLNQVFNNVGPDNNLDLVISLLTFGSYPNVCYHKEKRKILTTEGRNALIHKSSVNC 1035
Score = 321 (118.1 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 70/221 (31%), Positives = 120/221 (54%)
Query: 39 NNSLINRWNGK-PYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQ 97
+N L+N N + Q IL +R LPV +E+ + + N V+I+ G TG GKTTQ
Sbjct: 368 SNDLLNELNYQLEQDQNLQTILTERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQ 427
Query: 98 IPQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFED- 156
+PQ++L+ + R I TQP E +G+ GYS+RFE
Sbjct: 428 VPQYILD--EFIKGGRASDCNIVVTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESF 485
Query: 157 CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD 216
+ + T G+LLR+ + + +++DE HER + TD L +L++V++ PD
Sbjct: 486 LPRPHASILFCTVGVLLRKLESG--IRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPD 543
Query: 217 LKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
+++++MSAT++ F+ YF+ P+++V GR HPV+ ++ ++
Sbjct: 544 VRVILMSATIDTTMFKEYFFNCPVIEVHGRAHPVQEYFLED 584
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 604 (217.7 bits), Expect = 8.8e-58, P = 8.8e-58
Identities = 170/557 (30%), Positives = 286/557 (51%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ SL+ W +R + ++ LPV ++ L ++ + V+++ G+TG GKTT+I
Sbjct: 440 SQSLLELW------RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRI 493
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
PQ +LE E R ++I TQP E+ ++ VG+ +R E
Sbjct: 494 PQLLLERYVTEGRGARCNVII--TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKP 551
Query: 159 SART-VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 217
AR L + T G+LLR+ ++P LE +V+DE HER + TD L LLK + + P L
Sbjct: 552 PARGGALLFCTVGILLRKLQSNPSLEGVSHVVVDEVHERDVNTDFLLILLKGLQRLNPAL 611
Query: 218 KLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY----- 262
+LV+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 612 RLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESE 671
Query: 263 ----LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G +
Sbjct: 672 DECALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLI 727
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
+P++S +P Q+ IF+ RKIV++TNIAETS+TI+ IV+V+D G K+
Sbjct: 728 LPVHSNIPMMDQKAIFQQPPIGV-------RKIVLATNIAETSITINDIVHVVDSGLHKE 780
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
+ Y+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR
Sbjct: 781 ERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MAPFQVPEILR 839
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
+ L N VL K + + + +F+ D P + + A+ +L +G LD LT +G+
Sbjct: 840 TPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQ 898
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI 551
+++ DP+++K +V + + C + +L + + L+ + F + + D+ KA H
Sbjct: 899 RLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHD 957
Query: 552 DG-DHLTLLNVYHAYKQ 567
G DHL + +++
Sbjct: 958 SGSDHLAFVRAVSGWEE 974
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 372 (136.0 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 117/416 (28%), Positives = 207/416 (49%)
Query: 256 QEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
+E + +EA ++ + +++ P G +LVFL G I A +K + + G +
Sbjct: 632 KETPLELIEALLKYIETLNV--P-GAVLVFLPGWNLIY-AMQKHLEMNPHFGSH--SYCI 685
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
+PL+S +P Q+K+F+ K+++STNIAETS+TI+ +VYVID K
Sbjct: 686 LPLHSQIPRDEQRKVFDPVPDGII-------KVILSTNIAETSITINDVVYVIDSCKQKV 738
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
K++ + + SK + QR GRAGR +PG CF L ++ F+ L+ PEI R
Sbjct: 739 KLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDK-LETHLTPEIFR 797
Query: 436 SNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKM 493
+ L L++K L + + HF ++PP + ++ A L L ALD + LT +G +
Sbjct: 798 TPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRIL 857
Query: 494 SEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG 553
++ P++P++ KM++ + + + +ISA P F+ E ++ + G+
Sbjct: 858 AKLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFIS--EGRRLGYVHRNFAGNRFS 915
Query: 554 DHLTLLNVYHAY---KQNNEDPS--WCYDNFVNHRALKSADNVRQQLVRIM--ARFNLKL 606
DH+ LL+V+ A+ + ED +C +N L+ + QL I+ A F +
Sbjct: 916 DHVALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDILVNAGFPEEC 975
Query: 607 CSND-FNSR--DYYVNIRKAMLA-GYFMQVAHLERTGQYLTVKD-NQVVHLHPSNC 657
N FN+ D +++ ++LA G + V + + + LT + N ++H NC
Sbjct: 976 LMNQVFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSVNC 1031
Score = 307 (113.1 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 66/202 (32%), Positives = 115/202 (56%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
++L R+SLPV + +EE + + + V+I+ G TG GKTTQ+PQ++L+ + DR +
Sbjct: 382 QVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILD--EYIRNDRAAQ 439
Query: 117 MMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDC-SSARTVLKYLTDGMLLRE 175
I TQP E IG+ GYS+RFE + + T G+LLR+
Sbjct: 440 CNIVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRK 499
Query: 176 AMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYF 235
+ + +++DE HER + TD L +L++V++ P++++++MSAT++ F YF
Sbjct: 500 LESG--IRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYF 557
Query: 236 YGAPLMKVPGRLHPVEIFYTQE 257
+ P+++V GR PV+ +Y ++
Sbjct: 558 FNCPIIEVFGRTFPVQEYYLED 579
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 601 (216.6 bits), Expect = 1.9e-57, P = 1.9e-57
Identities = 165/538 (30%), Positives = 279/538 (51%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
+ ++ LPV ++ L ++ + V+++ G+TG GKTT+IPQ +LE E R +
Sbjct: 455 VWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNV 514
Query: 118 MIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCSSART-VLKYLTDGMLLREA 176
+I TQP E+ ++ VG+ +R E AR L + T G+LLR+
Sbjct: 515 II--TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKL 572
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 236
++P LE +++DE HER + TD L LLK + + P L+LV+MSAT + E+F YF
Sbjct: 573 QSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFG 632
Query: 237 GAPLMKVPGRLHPVEIFYTQE----------PERDY---------LEAAIRTVVQIHMC- 276
G P++KVPG ++PV+ Y ++ P R L+ + T + +H+
Sbjct: 633 GCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDA 692
Query: 277 --EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEXX 334
EP G IL FL G +EI+ +++ + + G ++P++S +P Q+ IF+
Sbjct: 693 RGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPVHSNIPMMDQKAIFQQP 748
Query: 335 XXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 394
RKIV++TNIAETS+TI+ IV+V+D G K++ Y+ + +V L +S+
Sbjct: 749 PVGV-------RKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSR 801
Query: 395 ASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 454
A+ QR GRAGR Q G + L+ + P PEILR+ L N VL K + + +
Sbjct: 802 ANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTPLENLVLQAK-IHMPEKT 859
Query: 455 HFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESP 510
+F+ D P + + A+ +L +G LD LT +G++++ DP+++K +V +
Sbjct: 860 AVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAA 919
Query: 511 KYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG-DHLTLLNVYHAYKQ 567
+ C + +L + + L+ + F + + D+ KA H G DHL + +++
Sbjct: 920 IFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGWEE 976
>RGD|1307239 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=ISO] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 RGD:1307239 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 IPI:IPI00952339
Ensembl:ENSRNOT00000068255 UCSC:RGD:1307239 Uniprot:D3ZWE8
Length = 475
Score = 546 (197.3 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 117/318 (36%), Positives = 181/318 (56%)
Query: 384 VESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVL 443
+E L V +SK A QR+GRAGR G C+RLYTE F+ + PEI R NLA+ +L
Sbjct: 154 LEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFDK-FEKMAAPEIQRCNLASVML 212
Query: 444 TLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDP 500
L + + +++ FDFM P+P+ + A+ L+ LGAL DD LT +G KM+ FPL+P
Sbjct: 213 QLLAMKVPNVLTFDFMSRPSPDHIEAAIAQLDLLGALEHKDDQLALTPIGRKMAAFPLEP 272
Query: 501 QMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLN 560
+ +K ++ S K++C+ EIL+I ++LSV + P + + +F +GDH+TLLN
Sbjct: 273 KFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLN 332
Query: 561 VYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI 620
+Y +K + WC +NFVN + + VR QL I + ++ + S SR ++
Sbjct: 333 IYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLRDICLKMSMPIMS----SRGDMESV 388
Query: 621 RKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIR 679
R+ + FM A L+ G Y T +Q V +HPS+ L H KP V+Y + T++ ++R
Sbjct: 389 RRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMR 448
Query: 680 TVTDVRGEWLIDIAPHYY 697
+ V EWL + AP Y+
Sbjct: 449 DLCVVDAEWLYEAAPDYF 466
Score = 62 (26.9 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 49 KPYSQRYYEILE-KRKSLPVWQQKEEFLQVLKANQVIILVGE 89
+P + Y E LE +R+SLP+++ + + L L+ +L+GE
Sbjct: 48 QPSASPYREALELQRRSLPIFRARGQLLAQLRNLDNAVLIGE 89
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 599 (215.9 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 169/557 (30%), Positives = 286/557 (51%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ SL+ W +R I ++ LPV ++ L ++ + V+++ G+TG GKTT+I
Sbjct: 414 SQSLLELW------RRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRI 467
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
PQ +LE E R ++I TQP E+ ++ VG+ +R E
Sbjct: 468 PQLLLERYVTEGRGARCNVII--TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKP 525
Query: 159 SART-VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 217
AR L + T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L
Sbjct: 526 PARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPAL 585
Query: 218 KLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY----- 262
+LV+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 586 RLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESE 645
Query: 263 ----LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G +
Sbjct: 646 DECALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLI 701
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
+P++S +P Q+ IF+ RKIV++TNIAETS+T++ IV+V+D G K+
Sbjct: 702 LPVHSNIPMMDQKAIFQQPPLGV-------RKIVLATNIAETSITVNDIVHVVDSGLHKE 754
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
+ Y+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR
Sbjct: 755 ERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILR 813
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
+ L N VL K + + + +F+ D P + + A+ +L +G LD LT +G+
Sbjct: 814 TPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQ 872
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI 551
+++ DP+++K +V + + C + +L + + L+ + F + + D+ KA H
Sbjct: 873 RLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHD 931
Query: 552 DG-DHLTLLNVYHAYKQ 567
G DHL + +++
Sbjct: 932 SGSDHLAFVRAVAGWEE 948
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 599 (215.9 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 169/557 (30%), Positives = 286/557 (51%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ SL+ W +R I ++ LPV ++ L ++ + V+++ G+TG GKTT+I
Sbjct: 414 SQSLLELW------RRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRI 467
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
PQ +LE E R ++I TQP E+ ++ VG+ +R E
Sbjct: 468 PQLLLERYVTEGRGARCNVII--TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKP 525
Query: 159 SART-VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 217
AR L + T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L
Sbjct: 526 PARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPAL 585
Query: 218 KLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY----- 262
+LV+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 586 RLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESE 645
Query: 263 ----LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G +
Sbjct: 646 DECALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLI 701
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
+P++S +P Q+ IF+ RKIV++TNIAETS+T++ IV+V+D G K+
Sbjct: 702 LPVHSNIPMMDQKAIFQQPPLGV-------RKIVLATNIAETSITVNDIVHVVDSGLHKE 754
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
+ Y+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR
Sbjct: 755 ERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILR 813
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
+ L N VL K + + + +F+ D P + + A+ +L +G LD LT +G+
Sbjct: 814 TPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQ 872
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI 551
+++ DP+++K +V + + C + +L + + L+ + F + + D+ KA H
Sbjct: 873 RLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHD 931
Query: 552 DG-DHLTLLNVYHAYKQ 567
G DHL + +++
Sbjct: 932 SGSDHLAFVRAVAGWEE 948
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 599 (215.9 bits), Expect = 3.0e-57, P = 3.0e-57
Identities = 169/557 (30%), Positives = 286/557 (51%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ SL+ W +R I ++ LPV ++ L ++ + V+++ G+TG GKTT+I
Sbjct: 437 SQSLLELW------RRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRI 490
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
PQ +LE E R ++I TQP E+ ++ VG+ +R E
Sbjct: 491 PQLLLERYVTEGRGARCNVII--TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKP 548
Query: 159 SART-VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 217
AR L + T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L
Sbjct: 549 PARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPAL 608
Query: 218 KLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY----- 262
+LV+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 609 RLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESE 668
Query: 263 ----LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G +
Sbjct: 669 DECALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLI 724
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
+P++S +P Q+ IF+ RKIV++TNIAETS+T++ IV+V+D G K+
Sbjct: 725 LPVHSNIPMMDQKAIFQQPPLGV-------RKIVLATNIAETSITVNDIVHVVDSGLHKE 777
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
+ Y+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR
Sbjct: 778 ERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILR 836
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
+ L N VL K + + + +F+ D P + + A+ +L +G LD LT +G+
Sbjct: 837 TPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQ 895
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI 551
+++ DP+++K +V + + C + +L + + L+ + F + + D+ KA H
Sbjct: 896 RLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHD 954
Query: 552 DG-DHLTLLNVYHAYKQ 567
G DHL + +++
Sbjct: 955 SGSDHLAFVRAVAGWEE 971
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 599 (215.9 bits), Expect = 3.0e-57, P = 3.0e-57
Identities = 169/557 (30%), Positives = 286/557 (51%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ SL+ W +R I ++ LPV ++ L ++ + V+++ G+TG GKTT+I
Sbjct: 442 SQSLLELW------RRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRI 495
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
PQ +LE E R ++I TQP E+ ++ VG+ +R E
Sbjct: 496 PQLLLERYVTEGRGARCNVII--TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKP 553
Query: 159 SART-VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 217
AR L + T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L
Sbjct: 554 PARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPAL 613
Query: 218 KLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE----------PERDY----- 262
+LV+MSAT + E+F YF G P++KVPG ++PV+ Y ++ P R
Sbjct: 614 RLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESE 673
Query: 263 ----LEAAIRTVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
L+ + T + +H+ EP G IL FL G +EI+ +++ + + G +
Sbjct: 674 DECALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLI 729
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
+P++S +P Q+ IF+ RKIV++TNIAETS+T++ IV+V+D G K+
Sbjct: 730 LPVHSNIPMMDQKAIFQQPPLGV-------RKIVLATNIAETSITVNDIVHVVDSGLHKE 782
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
+ Y+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR
Sbjct: 783 ERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILR 841
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
+ L N VL K + + + +F+ D P + + A+ +L +G LD LT +G+
Sbjct: 842 TPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQ 900
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI 551
+++ DP+++K +V + + C + +L + + L+ + F + + D+ KA H
Sbjct: 901 RLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHD 959
Query: 552 DG-DHLTLLNVYHAYKQ 567
G DHL + +++
Sbjct: 960 SGSDHLAFVRAVAGWEE 976
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 597 (215.2 bits), Expect = 4.3e-57, P = 4.3e-57
Identities = 169/557 (30%), Positives = 287/557 (51%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ SL+ W +R + ++ LPV ++ L ++ + V+++ G+TG GKTT+I
Sbjct: 386 SQSLLELW------RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRI 439
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
PQ +LE E R ++I TQP E+ ++ VG+ +R E
Sbjct: 440 PQLLLERYVTEGRGARCNVII--TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKP 497
Query: 159 SART-VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 217
+R L + T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L
Sbjct: 498 PSRGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPAL 557
Query: 218 KLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE-----PERDYL--------- 263
+LV+MSAT + E+F YF G P++KVPG ++PV+ Y ++ + YL
Sbjct: 558 RLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESE 617
Query: 264 -EAAIR----TVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
E A+ T + +H+ EP G IL FL G +EI+ +++ + + G +
Sbjct: 618 DECALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLI 673
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
+P++S +P Q+ IF+ RKIV++TNIAETS+TI+ IV+V+D G K+
Sbjct: 674 LPVHSNIPMMDQKAIFQQPPVGV-------RKIVLATNIAETSITINDIVHVVDSGLHKE 726
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
+ Y+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR
Sbjct: 727 ERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILR 785
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
+ L N VL K + + + +F+ D P + + A+ +L +G LD LT +G+
Sbjct: 786 TPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQ 844
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI 551
+++ DP+++K +V + + C + +L + + L+ + F + + D+ KA H
Sbjct: 845 RLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHD 903
Query: 552 DG-DHLTLLNVYHAYKQ 567
G DHL + +++
Sbjct: 904 SGSDHLAFVRAVAGWEE 920
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 597 (215.2 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 169/557 (30%), Positives = 287/557 (51%)
Query: 39 NNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQI 98
+ SL+ W +R + ++ LPV ++ L ++ + V+++ G+TG GKTT+I
Sbjct: 414 SQSLLELW------RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRI 467
Query: 99 PQFVLEGVDIETPDRRRKMMIACTQPXXXXXXXXXXXXXEEMDVTIGEEVGYSIRFEDCS 158
PQ +LE E R ++I TQP E+ ++ VG+ +R E
Sbjct: 468 PQLLLERYVTEGRGARCNVII--TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKP 525
Query: 159 SART-VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDL 217
+R L + T G+LLR+ ++P LE +++DE HER + TD L LLK + + P L
Sbjct: 526 PSRGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPAL 585
Query: 218 KLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE-----PERDYL--------- 263
+LV+MSAT + E+F YF G P++KVPG ++PV+ Y ++ + YL
Sbjct: 586 RLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESE 645
Query: 264 -EAAIR----TVVQIHMC---EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKV 315
E A+ T + +H+ EP G IL FL G +EI+ +++ + + G +
Sbjct: 646 DECALDLDLVTDLVLHIDARGEPGG-ILCFLPGWQEIKGVQQRLQEAL---GMHESKYLI 701
Query: 316 VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
+P++S +P Q+ IF+ RKIV++TNIAETS+TI+ IV+V+D G K+
Sbjct: 702 LPVHSNIPMMDQKAIFQQPPVGV-------RKIVLATNIAETSITINDIVHVVDSGLHKE 754
Query: 376 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILR 435
+ Y+ + +V L +S+A+ QR GRAGR Q G + L+ + P PEILR
Sbjct: 755 ERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILR 813
Query: 436 SNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
+ L N VL K + + + +F+ D P + + A+ +L +G LD LT +G+
Sbjct: 814 TPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQ 872
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHI 551
+++ DP+++K +V + + C + +L + + L+ + F + + D+ KA H
Sbjct: 873 RLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHD 931
Query: 552 DG-DHLTLLNVYHAYKQ 567
G DHL + +++
Sbjct: 932 SGSDHLAFVRAVAGWEE 948
WARNING: HSPs involving 65 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 727 681 0.00079 121 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 315
No. of states in DFA: 618 (66 KB)
Total size of DFA: 359 KB (2180 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 55.52u 0.18s 55.70t Elapsed: 00:00:03
Total cpu time: 55.61u 0.18s 55.79t Elapsed: 00:00:03
Start: Fri May 10 06:32:25 2013 End: Fri May 10 06:32:28 2013
WARNINGS ISSUED: 2