BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004850
(727 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 1327 bits (3433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/729 (86%), Positives = 683/729 (93%), Gaps = 2/729 (0%)
Query: 1 MGTERKRKVSLFDVVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILE 60
MGTERKRKVSLFDV+++ S+S+K K+NG+G A ++LIN+WNGK YSQRY+EILE
Sbjct: 1 MGTERKRKVSLFDVMEDPSLSSKNTKSNGLGLAAAAGGGSNLINKWNGKAYSQRYFEILE 60
Query: 61 KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIA 120
KR+ LPVW QK++FL L +NQ +ILVGETGSGKTTQIPQFVL+ V + D+ RK ++
Sbjct: 61 KRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVG 120
Query: 121 CTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDP 180
CTQPRRVAAMSVSRRVA+EMDV+IGEEVGYSIRFEDC+S+RT+LKYLTDGMLLREAM DP
Sbjct: 121 CTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADP 180
Query: 181 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPL 240
LLERYKVI+LDEAHERTLATDVLFGLLKEVL+NRPDLKLVVMSATLEAEKFQ YF GAPL
Sbjct: 181 LLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPL 240
Query: 241 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKIT 300
MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP GDILVFLTGEEEIEDACRKI
Sbjct: 241 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKIN 300
Query: 301 KEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLT 360
KE++N+GDQVGPVKVVPLYSTLPPAMQQKIF+PAP P EGGP GRKIVVSTNIAETSLT
Sbjct: 301 KEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLT 360
Query: 361 IDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKS 420
IDGIVYVIDPGFAKQKVYNPR+RVESLLVSPISKASAHQRSGRAGRT+PGKCFRLYTEKS
Sbjct: 361 IDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKS 420
Query: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 480
FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL
Sbjct: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 480
Query: 481 DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKA 540
DD+GNLT+ GE MSEFPLDPQMSKML+ SP++NCSNEILS+SAMLSVPNCFVRPREAQKA
Sbjct: 481 DDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKA 540
Query: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMA 600
ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP+WC++NFVN+RA+KSADNVRQQLVRIM+
Sbjct: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMS 600
Query: 601 RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCLDH 660
RFNLK+CS DFNSRDYYVNIRKAMLAGYFMQVAHLERTG YLTVKDNQVVHLHPSNCLDH
Sbjct: 601 RFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDH 660
Query: 661 KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEAKRVLERLYRKREK 720
KPEWVIYNEYVLT+RNFIRTVTD+RGEWL+D+A HYYDLSNFP CEAKR LE+LY+KRE+
Sbjct: 661 KPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKRALEKLYKKRER 720
Query: 721 ER--ENNRK 727
E+ NRK
Sbjct: 721 EKNESKNRK 729
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/677 (71%), Positives = 580/677 (85%), Gaps = 7/677 (1%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + P++ RYY+IL+KR LPVW+ K+ F +L +Q +LVGETGSGKTTQIPQ+
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 103 LEGV-DIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSAR 161
+E + + P R +ACTQPRRVAAMSV++RVA+EMDV +G+EVGYSIRFEDCSSA+
Sbjct: 175 VEYMRSLPGPKRG----VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK 230
Query: 162 TVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVV 221
T+LKY+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++V
Sbjct: 231 TILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIV 290
Query: 222 MSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-G 280
MSATL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE G
Sbjct: 291 MSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEG 350
Query: 281 DILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKE 340
D+L+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFEP PPP K+
Sbjct: 351 DLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQ 409
Query: 341 GGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 400
G GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR
Sbjct: 410 NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR 469
Query: 401 SGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMD 460
+GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMD
Sbjct: 470 AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD 529
Query: 461 PPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILS 520
PPAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LS
Sbjct: 530 PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS 589
Query: 521 ISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFV 580
I+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+
Sbjct: 590 ITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFI 649
Query: 581 NHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ 640
N+R+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG
Sbjct: 650 NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGH 709
Query: 641 YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 700
YLTVKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+S
Sbjct: 710 YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMS 769
Query: 701 NFPQCEAKRVLERLYRK 717
NFPQCEAKR L+R+ K
Sbjct: 770 NFPQCEAKRQLDRIIAK 786
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/677 (71%), Positives = 580/677 (85%), Gaps = 7/677 (1%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + P++ RYY+IL+KR LPVW+ K+ F +L +Q +LVGETGSGKTTQIPQ+
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 103 LEGV-DIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSAR 161
+E + + P R +ACTQPRRVAAMSV++RVA+EMDV +G+EVGYSIRFEDCSSA+
Sbjct: 175 VEYMRSLPGPKRG----VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK 230
Query: 162 TVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVV 221
T+LKY+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++V
Sbjct: 231 TILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIV 290
Query: 222 MSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-G 280
MSATL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE G
Sbjct: 291 MSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEG 350
Query: 281 DILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKE 340
D+L+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFEP PPP K+
Sbjct: 351 DLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQ 409
Query: 341 GGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQR 400
G GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR
Sbjct: 410 NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR 469
Query: 401 SGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMD 460
+GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMD
Sbjct: 470 AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD 529
Query: 461 PPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILS 520
PPAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LS
Sbjct: 530 PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS 589
Query: 521 ISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFV 580
I+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+
Sbjct: 590 ITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFI 649
Query: 581 NHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ 640
N+R+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG
Sbjct: 650 NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGH 709
Query: 641 YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 700
YLTVKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+S
Sbjct: 710 YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMS 769
Query: 701 NFPQCEAKRVLERLYRK 717
NFPQCEAKR L+R+ K
Sbjct: 770 NFPQCEAKRQLDRIIAK 786
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/676 (71%), Positives = 580/676 (85%), Gaps = 5/676 (0%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + P++ RYY+IL+KR LPVW+ K+ F +L +Q +LVGETGSGKTTQIPQ+
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 103 LEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSART 162
+E + P +R +ACTQPRRVAAMSV++RVA+EMDV +G+EVGYSIRFEDCSSA+T
Sbjct: 175 VEYMR-SLPGPKRG--VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKT 231
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VM
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVM 291
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GD 281
SATL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD
Sbjct: 292 SATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGD 351
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEG 341
+L+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFEP PPP K+
Sbjct: 352 LLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQN 410
Query: 342 GPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
G GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+
Sbjct: 411 GAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDP
Sbjct: 471 GRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDP 530
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI
Sbjct: 531 PAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSI 590
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVN 581
+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E WCYDNF+N
Sbjct: 591 TAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFIN 650
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQY 641
+R+L SADNVRQQL RIM RFNL S DF SRDYY+NIRKA++ GYFMQVAHLERTG Y
Sbjct: 651 YRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHY 710
Query: 642 LTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
LTVKDNQVV LHPS LDHKPEWV+YNE+VLT++N+IRT TD++ EWL+ IAP YYD+SN
Sbjct: 711 LTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Query: 702 FPQCEAKRVLERLYRK 717
FPQCEAKR L+R+ K
Sbjct: 771 FPQCEAKRQLDRIIAK 786
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/672 (68%), Positives = 562/672 (83%), Gaps = 4/672 (0%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN +N +P+S RY+ I EKR LPVW+ KE+F+++L+ NQ I LVGETGSGKTTQIPQ+
Sbjct: 54 INPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWA 113
Query: 103 LEGVDIETPDRRRKM--MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSA 160
+E + + + ++ACTQPRRVAAMSV+ RVAEEMDV +G+EVGYSIRFEDC S
Sbjct: 114 VEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISE 173
Query: 161 RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 220
RTVLKY TDGMLLREAM PLL++YKV++LDEAHERTLATD+L GL+KE+++NR D+K+V
Sbjct: 174 RTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVV 233
Query: 221 VMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-S 279
+MSATL+A KFQ YF PL+ VPGR PVEIF+T E+DYLEAAIRTV+QIHM E
Sbjct: 234 IMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVE 293
Query: 280 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSK 339
GDIL+FLTG+EEIE+AC++I +EI +G G + +PLYSTLPPA QQ+IFEPAPP ++
Sbjct: 294 GDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPP-NR 352
Query: 340 EGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 399
G RK V+STNIAETSLTIDG+V+VIDPGF+KQKVYNPR+RVESLLV PISKASA Q
Sbjct: 353 PNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQ 412
Query: 400 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM 459
R+GRAGRT+PGKCFRLYTE ++ +++Q QTYPEILRSNL + VL LKKLG +DLVHFDFM
Sbjct: 413 RAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFM 472
Query: 460 DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEIL 519
DPPAPETLMRALE+LNYL A++DDG LTE+G M+EFPLDPQ++KML+ S + NCSNEIL
Sbjct: 473 DPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEIL 532
Query: 520 SISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SI+AMLSVP C+VRP E + ADEAKARF HIDGDHLTLLNVYH++KQN EDP WCYDNF
Sbjct: 533 SITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNF 592
Query: 580 VNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTG 639
+N+R +K+AD VR QL R+M ++NL+ S DF SRDYY+NIRKA++AG+FMQVAHLER+G
Sbjct: 593 INYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSG 652
Query: 640 QYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
Y+TVKDNQ+V+LHPS LDHKPEW +YNE+VLT++NFIRTVTDVR EWL+ IAP YYDL
Sbjct: 653 HYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDL 712
Query: 700 SNFPQCEAKRVL 711
NFP + KR L
Sbjct: 713 DNFPDGDTKRKL 724
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/688 (65%), Positives = 558/688 (81%), Gaps = 10/688 (1%)
Query: 44 NRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVL 103
N +N KP+SQ Y++ILE R+ LPV+QQ+EEFL++ NQ+I+ VGETGSGKTTQIPQFVL
Sbjct: 54 NFFNDKPFSQNYFKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVL 113
Query: 104 EGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTV 163
E P IACTQPRRVAAMSV++RVA+EMDV +GEEVGY+IRFEDCS T+
Sbjct: 114 YD---ELP-HLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTL 169
Query: 164 LKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMS 223
LKY+TDGMLLREAMTD +L RY I+LDEAHERTLATD+L GL+K + RPDLK++VMS
Sbjct: 170 LKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMS 229
Query: 224 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDIL 283
ATL+A+KFQ YF+ APL+ VPGR +PVEI+YTQEPERDYLEAA+RTV+QIH+ E GDIL
Sbjct: 230 ATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDIL 289
Query: 284 VFLTGEEEIEDACRKITKEITNMGDQ--VGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEG 341
VFLTGEEEIEDACRKIT E ++ + GP+KV PLY +LPP QQ+IFEP P +K G
Sbjct: 290 VFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSG 349
Query: 342 GPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
GRK+V+STNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPISKASA QR+
Sbjct: 350 Y--GRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRA 407
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTE++F +L QTYPEILRSNL++TVL LKKLGIDDLVHFD+MDP
Sbjct: 408 GRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDP 467
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPET+MRALE LNYL LDD+G+LT +G K SEFPLDP ++ ML+ SP++ CSNE+LS+
Sbjct: 468 PAPETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSL 527
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVN 581
+A+LSVPN FVRP A+K ADE + +F H DGDHLTLLNVYHAYK WC+++F++
Sbjct: 528 TALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLS 587
Query: 582 HRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQ- 640
HRAL SADNVR+QL R M R ++L S F+ ++YYVNIR+A+++G+FMQVA G+
Sbjct: 588 HRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKN 647
Query: 641 YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLS 700
Y+T+KDNQVV LHPS L PEWV+YNE+VLT+++FIR VT +R EWLI++AP+YYDL
Sbjct: 648 YVTMKDNQVVSLHPSCGLSVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLD 707
Query: 701 NFPQC-EAKRVLERLYRKREKERENNRK 727
+F E K L+++Y+ + ++N R+
Sbjct: 708 DFDNNKEVKSALQKVYQMAARSKKNARR 735
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/680 (64%), Positives = 543/680 (79%), Gaps = 19/680 (2%)
Query: 39 NNSLINRW--NGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTT 96
+N I++W + +S+RYYEILEKRK LPVW+QKE+F++V+K NQV+ILVGETGSGKTT
Sbjct: 49 SNLTIDQWIPKKETFSKRYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTT 108
Query: 97 QIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFED 156
QIPQFV++ I R M+ TQPRRVAA+SV++RV+EEMD +GEEVGYSIRFE+
Sbjct: 109 QIPQFVVDAGLI-----RPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEE 163
Query: 157 CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD 216
SSART +KYLTDGMLLRE+M+DP L +Y VI+LDEAHERTL+TD+LFGL+K++LK R D
Sbjct: 164 LSSARTFMKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKD 223
Query: 217 LKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 276
LKL+VMSATLEA KFQ YF APL+KVPGRLHPVEIFYT+E +DYLE+A+RTV+ IH
Sbjct: 224 LKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTN 283
Query: 277 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPP 336
E +GDILVFLTGEEEIED C KI +E G + P+K +PLYS+LP Q KIF+
Sbjct: 284 EGTGDILVFLTGEEEIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTC-- 339
Query: 337 PSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
KE RK +VSTNIAETSLTIDGIV+V+DPGF+KQK YNPR RVESLLV+PISKAS
Sbjct: 340 --KE-----RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKAS 392
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A+QR+GRAGRT+PGKCFRLYTEK+F + QT+PEILRSNLA+ VL L KLG+ DLVHF
Sbjct: 393 ANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHF 452
Query: 457 DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
DFMDPP P+TL+RALEVL+YLGALDD+G LTE+G MSEFPLDPQ+SKML+ S + +CSN
Sbjct: 453 DFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSN 512
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCY 576
EIL+I+AMLS PNCF+RP++ + AD AK F H DGDHLT+LNVYH++K+N EDP+WCY
Sbjct: 513 EILTIAAMLSAPNCFMRPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDPTWCY 572
Query: 577 DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLE 636
DNF+NHRA+K AD+VR QL RI+ RF L L S D NS+ YY NI+K + AG+FMQVA E
Sbjct: 573 DNFLNHRAIKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCE 632
Query: 637 RTGQYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHY 696
+ Y T+ D Q V HPS L +PE+ IYNE+VLTS N+IRT+TDV+ +WL+++AP Y
Sbjct: 633 KKNIYFTLGDEQSVIFHPSTGLTRRPEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSY 692
Query: 697 YDLSNFPQCEAKRVLERLYR 716
+ +FP+ + K ++R R
Sbjct: 693 FKQKSFPK-KTKETIQRAQR 711
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/693 (63%), Positives = 548/693 (79%), Gaps = 23/693 (3%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + G+ ++ +Y +IL+ R+ LPV Q++EFL++ + NQ+++ VGETGSGKTTQIPQFV
Sbjct: 71 INPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFV 130
Query: 103 LEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSART 162
L E P +ACTQPRRVAAMSV++RVAEEMDV +GEEVGYSIRFE+ +S +T
Sbjct: 131 LFD---EMP-HLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKT 186
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM D L RY I+LDEAHERTLATD+L GLLK+V+K RPDLK+++M
Sbjct: 187 ILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIM 246
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
SATL+AEKFQ YF APL+ VPGR +PVE++YT E +RDYL++AIRTV+QIH E +GDI
Sbjct: 247 SATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDI 306
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQV------GPVKVVPLYSTLPPAMQQKIFEPAPP 336
L+FLTGE+EIEDA RKI+ E GDQ+ GP+ V PLY +LPP QQ+IFEPAP
Sbjct: 307 LLFLTGEDEIEDAVRKISLE----GDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAP- 361
Query: 337 PSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
G PGRK+V+STNIAETSLTIDGIVYV+DPGF+KQKVYNPR+RVESLLVSPISKAS
Sbjct: 362 -ESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 420
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QR+GRAGRT+PGKCFRLYTE++F +L Q+YPEILRSNL++TVL LKKLGIDDLVHF
Sbjct: 421 AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF 480
Query: 457 DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
DFMDPPAPET+MRALE LNYL LDD+GNLT +G S+FPLDP ++ ML+ S ++ CS
Sbjct: 481 DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQ 540
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP---- 572
EIL+I AMLSVPN F+RP + +K AD+AK F H DGDH+TLLNVYHA+K +
Sbjct: 541 EILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIH 600
Query: 573 SWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQV 632
WC D+++N+R+L +ADN+R QL R+M R+NL+L + D+ S Y+ NIRKA+ +G+FMQV
Sbjct: 601 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQV 660
Query: 633 AHLERTGQ--YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
A +R+G Y+TVKDNQ V +HPS L H EWVIYNE+VLTS+N+IRTVT VR EWLI
Sbjct: 661 AK-KRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLI 719
Query: 691 DIAPHYYDLSNFPQCEAKRVLERLYRKREKERE 723
+IAP YYDLSNF + + K LER+ K ++ E
Sbjct: 720 EIAPAYYDLSNFQKGDVKLSLERIKEKVDRLNE 752
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/456 (76%), Positives = 401/456 (87%), Gaps = 2/456 (0%)
Query: 164 LKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMS 223
+KY+TDGMLLRE MTDPLLERY VI+LDEAHERT+ATD+L GLLKEV K R DLKLVVMS
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMS 60
Query: 224 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDI 282
ATL+A KFQ YF APLM VPGR HPVEIFYT EPERDYLEAAIRTVVQIHMCE GD+
Sbjct: 61 ATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 120
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGG 342
L+FLTG+EEIE+AC++I +E+ N+G +VG +K +PLYSTLPPAMQQ+IFE APP +K G
Sbjct: 121 LLFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPP-NKANG 179
Query: 343 PPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLVSPISKASA QR G
Sbjct: 180 AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRVG 239
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
RAGRT+PGKCFRLYTEK++++++Q TYPEILRSNL VL LKKLGIDDLVHFDFMDPP
Sbjct: 240 RAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPP 299
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
APETLMRALE+LNYLGALDD G+LT +G M+EFPLDPQ++KM++ S Y+CSNEILS++
Sbjct: 300 APETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTDYSCSNEILSVT 359
Query: 523 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNH 582
AMLSVP CF+RP EA+K ADEAK RF HIDGDHLTLLNVYHA+KQNNEDP WCYDNF+ +
Sbjct: 360 AMLSVPQCFLRPNEAKKLADEAKMRFAHIDGDHLTLLNVYHAFKQNNEDPQWCYDNFIQY 419
Query: 583 RALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYV 618
R+LKSAD+VRQQL RIM RF L+ S +FNS+DYY+
Sbjct: 420 RSLKSADSVRQQLARIMDRFALQRTSTNFNSKDYYL 455
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/664 (52%), Positives = 486/664 (73%), Gaps = 21/664 (3%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E+R+SLP++ +E FLQ + +Q+++++GETGSGKTTQ+ Q++ E +
Sbjct: 501 IKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEA------GYGTRG 554
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQPRRVAAMSVS+RVAEE +G+EVGY+IRFEDC+S T++K++TDG+LLRE +
Sbjct: 555 KIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECL 614
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
DP L Y VI+LDEAHERT++TDVLFGLLK+ L+ RP+LK+++ SATLEAEKF YF
Sbjct: 615 LDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMN 674
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
A L +PGR PV+I YT++PE DYL+A++ TV+QIH+ EP GDIL+FLTG+EEI+ AC+
Sbjct: 675 AQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQ 734
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ + + ++G V + ++P+YS LP MQ KIFEPAPP S RK+V++TNIAET
Sbjct: 735 ILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGS-------RKVVIATNIAET 787
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLTIDGI YVIDPGF+KQK +NP+ ++SL+V+PIS+A+A QRSGRAGRT PGKC+RLYT
Sbjct: 788 SLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYT 847
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
E +F N++ + PEI R+NL NTVLT+K +GI+DL++FDFMDPP +TL+ A+E L L
Sbjct: 848 ESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSL 907
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD++G LT +G KM+EFPLDPQ+SKML+ S CS+EIL++ AMLSV N F RP+E
Sbjct: 908 GALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEK 967
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
Q AD+ KA+F +GDHLTLLNVY ++K + WC++NFV R+L+ A +VR+QL+
Sbjct: 968 QALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLIT 1027
Query: 598 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC 657
IM R+ L + S N Y I+KA+ +G+F + + Y T+ + Q V++HPS+
Sbjct: 1028 IMDRYKLDIISAGRN----YTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSST 1083
Query: 658 L-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN---FPQCEAKRVLER 713
L + P+WVIY+E V+T++ ++R V + +WL+++AP ++ S+ + + K +E
Sbjct: 1084 LFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRKRKEKIEP 1143
Query: 714 LYRK 717
LY K
Sbjct: 1144 LYDK 1147
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/658 (51%), Positives = 479/658 (72%), Gaps = 18/658 (2%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E+R+SLP+++ K+E +Q + NQV++++GETGSGKTTQ+ Q++ E K
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA------GYTTKG 561
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQPRRVAAMSV++RVAEE +GEEVGY+IRFEDC+ TV+KY+TDGMLLRE +
Sbjct: 562 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 621
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
D L +Y VI+LDEAHERT+ TDVLFGLLK+++K R DL+L+V SATL+AEKF GYF+
Sbjct: 622 IDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFN 681
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
+ +PGR PVEI YT++PE DYL+AA+ TV+QIH+ EP GDILVFLTG+EEI+ AC+
Sbjct: 682 CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQ 741
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ + + +G V + ++P+YS LP MQ +IF+P PPP K RK+VV+TNIAE
Sbjct: 742 SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDP-PPPGK------RKVVVATNIAEA 794
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLTIDGI YV+DPGFAKQ VYNP+ +ESL+++PIS+ASA QR+GRAGRT PGKC+RLYT
Sbjct: 795 SLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYT 854
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
E ++ N++ P + PEI R NL T LT+K +GI+DL+ FDFMDPP P+ L+ A+E L L
Sbjct: 855 ESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSL 914
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD++G LT++G KM+EFPL+P +SKML+ S CS+EIL++ AM+ N F RPRE
Sbjct: 915 GALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREK 974
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
Q AD+ +A+F +GDHLTLL VY A+K N WC++NF+ R+L+ A +VR+QL+
Sbjct: 975 QAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLS 1034
Query: 598 IMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC 657
IM ++ L + + N + IRKA+ AG+F A + Y T+ +NQ V++HPS+
Sbjct: 1035 IMDKYKLDVVTAGKN----FTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSA 1090
Query: 658 L-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEAKRVLERL 714
L +P+WVIY++ V+T++ ++R VT + +WL+++AP ++ +S+ + ++ ER+
Sbjct: 1091 LFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERI 1148
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/711 (49%), Positives = 500/711 (70%), Gaps = 33/711 (4%)
Query: 22 AKLVKTNGVGPGAMMNNNNSLINRW-------NGKPYSQR-YYEILEKRKSLPVWQQKEE 73
+ + N G G M N+ I W N Y ++ ILE+R+SLP+++ KE+
Sbjct: 518 GRQIAANMRGIGMMPND----IPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQ 573
Query: 74 FLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVS 133
+Q + NQ++I++GETGSGKTTQI Q++ E + I CTQPRRVAAMSV+
Sbjct: 574 LVQAVHDNQILIVIGETGSGKTTQITQYLAEA------GYTSRGKIGCTQPRRVAAMSVA 627
Query: 134 RRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEA 193
+RV+EE +G+EVGY+IRFEDC+S TV+KY+TDGMLLRE + DP L +Y +I+LDEA
Sbjct: 628 KRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEA 687
Query: 194 HERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIF 253
HERT+ TDVLFGLLK+ ++ R D+KL+V SATL+A KF YFY AP+ +PGR +PVEI
Sbjct: 688 HERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 747
Query: 254 YTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPV 313
YT+EPE DYL+A++ TV+QIH+ EP GDILVFLTG+EEI+ AC + + + ++G V +
Sbjct: 748 YTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPEL 807
Query: 314 KVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFA 373
++P+YS LP MQ +IF+PAPP S RK+V++TNIAETSLTIDGI YV+DPGF
Sbjct: 808 IILPVYSALPSEMQTRIFDPAPPGS-------RKVVIATNIAETSLTIDGIYYVVDPGFV 860
Query: 374 KQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEI 433
KQKVYN + ++ L+V+PIS+A A QR+GRAGRT PGKC+RLYTE+++ +++ PEI
Sbjct: 861 KQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEI 920
Query: 434 LRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKM 493
R+NLA+TVL+LK +GI+DL+ FDFMD P ETL+ A+E L LGALDD+G LT +G +M
Sbjct: 921 QRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRM 980
Query: 494 SEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG 553
+EFPL+P + KML+ S CS E+L+I +MLSV N F RP++ Q AD+ KA+F +G
Sbjct: 981 AEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEG 1040
Query: 554 DHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNS 613
DHLTLL VY+++K N WCY+NF+ R+L+ A ++R+Q++ IM R L + S ++
Sbjct: 1041 DHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKST 1100
Query: 614 RDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVL 672
V ++KA+ +G+F A + Y T+ D QVV++HPS+ L + +PEWV+Y+E VL
Sbjct: 1101 ----VRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVL 1156
Query: 673 TSRNFIRTVTDVRGEWLIDIAPHYYDLSN---FPQCEAKRVLERLYRKREK 720
T++ ++R VT + WL++ AP ++ +S+ + + ++ LE LY + E+
Sbjct: 1157 TTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEE 1207
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/711 (49%), Positives = 500/711 (70%), Gaps = 33/711 (4%)
Query: 22 AKLVKTNGVGPGAMMNNNNSLINRW-------NGKPYSQR-YYEILEKRKSLPVWQQKEE 73
+ + N G G M N+ I W N Y ++ ILE+R+SLP+++ KE+
Sbjct: 542 GRQIAANMRGIGMMPND----IPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQ 597
Query: 74 FLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVS 133
+Q + NQ++I++GETGSGKTTQI Q++ E + I CTQPRRVAAMSV+
Sbjct: 598 LVQAVHDNQILIVIGETGSGKTTQITQYLAEA------GYTSRGKIGCTQPRRVAAMSVA 651
Query: 134 RRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEA 193
+RV+EE +G+EVGY+IRFEDC+S TV+KY+TDGMLLRE + DP L +Y +I+LDEA
Sbjct: 652 KRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEA 711
Query: 194 HERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIF 253
HERT+ TDVLFGLLK+ ++ R D+KL+V SATL+A KF YFY AP+ +PGR +PVEI
Sbjct: 712 HERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 771
Query: 254 YTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPV 313
YT+EPE DYL+A++ TV+QIH+ EP GDILVFLTG+EEI+ AC + + + ++G V +
Sbjct: 772 YTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPEL 831
Query: 314 KVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFA 373
++P+YS LP MQ +IF+PAPP S RK+V++TNIAETSLTIDGI YV+DPGF
Sbjct: 832 IILPVYSALPSEMQTRIFDPAPPGS-------RKVVIATNIAETSLTIDGIYYVVDPGFV 884
Query: 374 KQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEI 433
KQKVYN + ++ L+V+PIS+A A QR+GRAGRT PGKC+RLYTE+++ +++ PEI
Sbjct: 885 KQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEI 944
Query: 434 LRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKM 493
R+NLA+TVL+LK +GI+DL+ FDFMD P ETL+ A+E L LGALDD+G LT +G +M
Sbjct: 945 QRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRM 1004
Query: 494 SEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG 553
+EFPL+P + KML+ S CS E+L+I +MLSV N F RP++ Q AD+ KA+F +G
Sbjct: 1005 AEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEG 1064
Query: 554 DHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNS 613
DHLTLL VY+++K N WCY+NF+ R+L+ A ++R+Q++ IM R L + S ++
Sbjct: 1065 DHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKST 1124
Query: 614 RDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVL 672
V ++KA+ +G+F A + Y T+ D QVV++HPS+ L + +PEWV+Y+E VL
Sbjct: 1125 ----VRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVL 1180
Query: 673 TSRNFIRTVTDVRGEWLIDIAPHYYDLSN---FPQCEAKRVLERLYRKREK 720
T++ ++R VT + WL++ AP ++ +S+ + + ++ LE LY + E+
Sbjct: 1181 TTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEE 1231
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/648 (53%), Positives = 469/648 (72%), Gaps = 19/648 (2%)
Query: 52 SQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETP 111
+Q I E RKSLPV+ +E+ + ++ QV+I+VGETGSGKTTQIPQ++ E +T
Sbjct: 454 AQAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTG 513
Query: 112 DRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGM 171
I CTQPRRVAAMSV+ RVAEE+ +G EVGYSIRFEDC+S +TVL+Y+TDGM
Sbjct: 514 K------IGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGM 567
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
L+RE +T P L Y V+++DEAHERTL TD+LFGLLK++ + RPDLKL++ SAT++AE+F
Sbjct: 568 LVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERF 627
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
YF GAP +PGR + V YTQ PE DYL+AA+ TV+QIH+ EP GDILVFLTG+EE
Sbjct: 628 SDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEE 687
Query: 292 IEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVS 351
++ A + +G ++ + + +YSTLP +Q KIFEP PP + RK+V++
Sbjct: 688 VDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNA-------RKVVLA 740
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETSLTIDGI+YVIDPGF KQK++NPR +ESL+++P+S+ASA+QR GRAGR PGK
Sbjct: 741 TNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGK 800
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
CFRL+T +F+N+L+ T PEI R+NL N VL LK +GI+DL++FDFMDPP +TL+ AL
Sbjct: 801 CFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAAL 860
Query: 472 EVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC- 530
E L LGAL+D G LT++G KM+EFP+DPQ+SKM++ S KY CS EIL+I AMLSV N
Sbjct: 861 EQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTI 920
Query: 531 FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 590
F RP++ AAD A+ F H GDHLTL+NV++ ++++ WC++NF+ HR++K A +
Sbjct: 921 FYRPKDKAFAADAARKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQD 980
Query: 591 VRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVV 650
VR QL ++ R + L SN D +IRK + +G+F A LE++G + T K NQ V
Sbjct: 981 VRDQLELLLERVEIPLVSN----VDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSV 1036
Query: 651 HLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
+HPS+CL P+WV+Y+E VLT++ F+R + +++ WL +IAPH Y
Sbjct: 1037 QIHPSSCLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIY 1084
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/669 (51%), Positives = 487/669 (72%), Gaps = 21/669 (3%)
Query: 60 EKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMI 119
E+R+ LPV++ +++FL+ + NQ+++L+GETGSGKTTQI Q++ E + T D + MI
Sbjct: 505 EQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAE--EGYTSDSK---MI 559
Query: 120 ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTD 179
CTQPRRVAAMSV++RVAEE+ +GEEVGY+IRFED +S T +KY+TDGML RE + D
Sbjct: 560 GCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVD 619
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
PLL +Y VI+LDEAHERT+ATDVLFGLLK + RPDLKL+V SATL+AE+F YFY P
Sbjct: 620 PLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCP 679
Query: 240 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKI 299
+ +PGR +PVEI YT++PE DYL+AA+ TV+QIH+ E GDILVFLTG+EEI+ +C +
Sbjct: 680 IFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEIL 739
Query: 300 TKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSL 359
+ +GD + + ++P+YS LP +Q +IFEPAPP GRK+V++TNIAETSL
Sbjct: 740 YERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPG-------GRKVVIATNIAETSL 792
Query: 360 TIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEK 419
TIDGI YV+DPGF KQ ++P++ ++SL+V+PIS+A A QRSGRAGRT PGKC+RLYTE
Sbjct: 793 TIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTES 852
Query: 420 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 479
++ N++ P PEI R NL++T+L LK +GI+DL++FDFMDPP +T++ AL+ L L A
Sbjct: 853 AYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSA 912
Query: 480 LDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQK 539
LDD+G LT +G KM++FP++PQ+SK+L+ S + CS E+LSI AMLSVPN + RPRE Q+
Sbjct: 913 LDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQ 972
Query: 540 AADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIM 599
AD +A+F + + DHLTLLNVY +K N +WCY++++ R ++ A++VR+QL+R+M
Sbjct: 973 EADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLM 1032
Query: 600 ARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLE-RTGQYLTVKDNQVVHLHPSNCL 658
R+ + S R+ I +A+ +GYF VA + G Y T+ +N V++HPS L
Sbjct: 1033 DRYRHPVVSCG-RKREL---ILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVL 1088
Query: 659 DHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQ-CEAKRVLE--RL 714
K EWVIY+E + TS+ ++ TV+ V +WL+++AP ++ +N Q + K+ L+ L
Sbjct: 1089 FGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSKTKKNLKVLPL 1148
Query: 715 YRKREKERE 723
Y + EK E
Sbjct: 1149 YNRFEKPDE 1157
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/673 (51%), Positives = 472/673 (70%), Gaps = 23/673 (3%)
Query: 52 SQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETP 111
+Q+ I R+SLPV+ +EE L + +QV+I+ GETGSGKTTQIPQ++ E
Sbjct: 386 AQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFE-----EG 440
Query: 112 DRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGM 171
+ M IACTQPRRVAAMSV+ RVA EM V +G EVGYSIRFEDC+S RTVL+Y+TDGM
Sbjct: 441 YTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGM 500
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SAT++ +F
Sbjct: 501 LLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARF 560
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
+F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EE
Sbjct: 561 STFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEE 620
Query: 292 IEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVS 351
IE AC + +G ++ + V+P+Y+ LP MQ +IF+P PP + RK+VV+
Sbjct: 621 IEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVA 673
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GK
Sbjct: 674 TNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGK 733
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
CFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ AL
Sbjct: 734 CFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLAL 793
Query: 472 EVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC- 530
E L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N
Sbjct: 794 EQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSI 853
Query: 531 FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 590
F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R+++ A +
Sbjct: 854 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARD 913
Query: 591 VRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQ 648
VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y TVK Q
Sbjct: 914 VREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQ 966
Query: 649 VVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEA 707
V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY A
Sbjct: 967 TVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHA 1026
Query: 708 KRVLERLYRKREK 720
K++ +++ + RE+
Sbjct: 1027 KKMPKKIGKTREE 1039
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/673 (51%), Positives = 472/673 (70%), Gaps = 23/673 (3%)
Query: 52 SQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETP 111
+Q+ I R+SLPV+ +EE L + +QV+I+ GETGSGKTTQIPQ++ E
Sbjct: 389 AQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFE-----EG 443
Query: 112 DRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGM 171
+ M IACTQPRRVAAMSV+ RVA EM V +G EVGYSIRFEDC+S RTVL+Y+TDGM
Sbjct: 444 YTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGM 503
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLRE +++P L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SAT++ +F
Sbjct: 504 LLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARF 563
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEE 291
+F AP+ ++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EE
Sbjct: 564 STFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEE 623
Query: 292 IEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVS 351
IE AC + +G ++ + V+P+Y+ LP MQ +IF+P PP + RK+VV+
Sbjct: 624 IEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVA 676
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETSLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GK
Sbjct: 677 TNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGK 736
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
CFRLYT ++ ++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ AL
Sbjct: 737 CFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLAL 796
Query: 472 EVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC- 530
E L LGAL+ G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N
Sbjct: 797 EQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSI 856
Query: 531 FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 590
F RP++ AD A+ F GDHL LLNVY + ++ WCY+NFV R+++ A +
Sbjct: 857 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARD 916
Query: 591 VRQQLVRIMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQ 648
VR+QL ++ R + L C D Y+ +RKA+ AGYF A L R+G Y TVK Q
Sbjct: 917 VREQLEGLLERVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQ 969
Query: 649 VVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEA 707
V +HP++ L + +P W++Y+E VLT++ F+R V ++ WL+++APHYY A
Sbjct: 970 TVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHA 1029
Query: 708 KRVLERLYRKREK 720
K++ +++ + RE+
Sbjct: 1030 KKMPKKIGKTREE 1042
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/663 (51%), Positives = 468/663 (70%), Gaps = 23/663 (3%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIAC 121
R+SLPV+ +EE L + +Q++I+ GETGSGKTTQIPQ++ E + + M IAC
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQ-----KGMKIAC 454
Query: 122 TQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
TQPRRVAAMSV+ RVA EM V +G EVGYSIRFEDC+S RTVL+Y+TDGMLLRE +++P
Sbjct: 455 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPD 514
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLM 241
L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SATL+ +F +F AP+
Sbjct: 515 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVF 574
Query: 242 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITK 301
++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EEIE AC +
Sbjct: 575 RIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQD 634
Query: 302 EITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTI 361
+G ++ + V+P+Y+ LP MQ +IF+P PP + RK+VV+TNIAETSLTI
Sbjct: 635 RCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVATNIAETSLTI 687
Query: 362 DGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSF 421
+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GKCFRLYT ++
Sbjct: 688 EGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAY 747
Query: 422 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 481
++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ ALE L LGAL+
Sbjct: 748 QHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALN 807
Query: 482 DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPREAQKA 540
G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N F RP++
Sbjct: 808 HLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVH 867
Query: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMA 600
AD A+ F GDHL LLNVY + ++ WCY+NFV R+++ A +VR+QL ++
Sbjct: 868 ADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLE 927
Query: 601 RFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL 658
R + L C D Y+ +RKA+ AGYF A L R+G Y TVK Q V +HP++ L
Sbjct: 928 RVEVGLSSCQGD------YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSL 980
Query: 659 -DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEAKRVLERLYRK 717
+ +P W++Y+E VLT++ F+R V ++ WL+++APHYY AK++ ++ +
Sbjct: 981 FEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGKT 1040
Query: 718 REK 720
RE+
Sbjct: 1041 REE 1043
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/647 (49%), Positives = 466/647 (72%), Gaps = 22/647 (3%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
++E+R+SLP++ K+ ++ + NQ++++VGETGSGKTTQ+ Q+ +E R+
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEA------GLGRRG 586
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQPRRVAAMSV++RVAEE +G +VGY+IRFEDC+S T++KY+TDGMLLRE +
Sbjct: 587 KIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECL 646
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
DP L Y +I+LDEAHERT+ TDVLFGLLK + RP+LKL++ SATL++ KF YF
Sbjct: 647 IDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLE 706
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
AP+ +PGR PVEI YT+EPE DYLEAA TV+QIH+ EP GD+LVFLTG+EEI+ +C
Sbjct: 707 APIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCE 766
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ + + +MG V + ++P+Y LP MQ +IF+PAP RK+V++TNIAET
Sbjct: 767 VLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK-------RKVVIATNIAET 819
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLTIDGI YV+DPGF KQK+YNP+ ++SL+V+PIS+A+A QRSGRAGRT PGKC+RLYT
Sbjct: 820 SLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYT 879
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
E++F +++ P PEI R+NLA+T+L LK +GI++L+ FDFMD P ++++ AL L+ L
Sbjct: 880 ERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTL 939
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
ALD DG LT++G +M+EFPL+P +SK+L+ S CS E+L+I AML+V N F RP+E
Sbjct: 940 SALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEK 999
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
Q AD+ KA+F +GDHLTLL VY+++K ++ WC++NF+ R++K A ++R+QL+
Sbjct: 1000 QDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLG 1059
Query: 598 IMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
IM R L + C D + ++KA+ +G+F A + Y T+ D Q V++HPS
Sbjct: 1060 IMDRHKLLMVSCGRDVS------RVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPS 1113
Query: 656 N-CLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSN 701
+ C +PEWV+Y+E V+T++ ++R VT + +WL++ AP ++ + +
Sbjct: 1114 SACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/643 (51%), Positives = 454/643 (70%), Gaps = 20/643 (3%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E RKSLPV+ ++ F++ +K +QV+I+ GETGSGKTTQ+PQ++ E E R
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKR---- 412
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQPRRVAAMSV+ RVA+E+ +G +VGYSIRFEDC+S +TVLKY+TDGMLLRE +
Sbjct: 413 -IGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFL 471
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+P L Y V+++DEAHERTL TD+LFGL+K++ + R DLKL++ SATL+AEKF +F
Sbjct: 472 NEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDD 531
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDILVFLTGEEEIEDAC 296
AP+ ++PGR PV+I+YTQ PE DY++AAI T++QIH+ +P GDILVFLTG+EEIE
Sbjct: 532 APIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQ 591
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAE 356
+ + +G ++ + +P+Y+ LP +Q KIFEP P + RK+V++TNIAE
Sbjct: 592 EALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA-------RKVVLATNIAE 644
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TS+TIDGI YVIDPGF+KQ ++ R VE L V ISKA+A+QR+GRAGRT PGKCFRLY
Sbjct: 645 TSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLY 704
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
T ++ ++L+ Q PEI R+NL N VL LK LGI DLVHFDF+DPP ETL+ ALE L
Sbjct: 705 TAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYA 764
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV-PNCFVRPR 535
LGAL+ G LT++G +M+EFP DP MSKM++ S KY CS EI++I+AMLS F RP+
Sbjct: 765 LGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPK 824
Query: 536 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQL 595
AD A+ F GDH+TL+NVY+ +++++ WC +N+V HR +K A +VR QL
Sbjct: 825 AQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQL 884
Query: 596 VRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
V ++ R ++ S+ + IRKA+ AGYF V+ L+ TG Y TVK H HP+
Sbjct: 885 VGLLERVEIETKSSTDT-----IKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPN 939
Query: 656 NCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
+CL + P WV+Y E V TS+ F+R ++++ WL+++APHYY
Sbjct: 940 SCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYY 982
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/648 (50%), Positives = 465/648 (71%), Gaps = 18/648 (2%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIAC 121
RKSLPV+Q K++ L+ + QV+++V ETGSGKTTQ+PQF+ E + + I C
Sbjct: 415 RKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKK-----ICC 469
Query: 122 TQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
TQPRRVAAMSV+ RVA+EMDV +G+EVGYSIRFE+ +S +TV+KYLTDGMLLRE +T+P
Sbjct: 470 TQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPD 529
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLM 241
L Y VI++DEAHERTL TD+LFGL+K++ + RPDLK+++ SAT++AEKF YF AP+
Sbjct: 530 LASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVF 589
Query: 242 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITK 301
VPGR +PV+I+YT +PE +Y++AAI T++QIH +P+GDILVFLTG++EIE + +
Sbjct: 590 YVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQE 649
Query: 302 EITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTI 361
+G ++ + + P+Y+ LP +Q KIF+P PP + RK+V++TNIAETS+TI
Sbjct: 650 LCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGA-------RKVVLATNIAETSITI 702
Query: 362 DGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSF 421
DG+ +VID GF KQ +YNPR +ESL+ P S+ASA QR+GRAGR PGKCFRLYT +++
Sbjct: 703 DGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTY 762
Query: 422 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 481
NN+L T PEI R+NL N VL LK LGI++L+ FDFMD P PETLMR+LE+L LGAL+
Sbjct: 763 NNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALN 822
Query: 482 DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS-VPNCFVRPREAQKA 540
+ G LT++G +M+EFP DP +SK L+ S KY C E+LSI +ML + F RP++
Sbjct: 823 NRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIME 882
Query: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMA 600
AD+A+A F GDHLTLL++++ + + +W +NF+ +++L A +VR QL +
Sbjct: 883 ADKARANFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCE 942
Query: 601 RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTG-QYLTVKDNQVVHLHPSNCL- 658
R ++L +N S D I+KA+ AGYF A L+R+G Y TVK NQ V++HPS+ +
Sbjct: 943 RVEIELVTNSSESLD---PIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVA 999
Query: 659 DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCE 706
+ KP+ +IY E VLT++ + R +T+++ EWL++I+PHY+ N + +
Sbjct: 1000 EKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFKPENIEELQ 1047
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/643 (49%), Positives = 439/643 (68%), Gaps = 22/643 (3%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I +R++LPV+ + E +Q ++ NQ +++VGETGSGKTTQI Q++ E
Sbjct: 476 ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDE------EGFSNYG 529
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQPRRVAA+SV++RVAEE+ +G +VGY+IRFED + T +KY+TDGML REA+
Sbjct: 530 MIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREAL 589
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
DP + +Y VI+LDEAHERT+ATDVLF LLK+ RP+LK++V SATL + KF YF
Sbjct: 590 LDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLN 649
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P++ +PG+ PVE+ Y+Q P+ DY+EAA+ V+ IH+ E GDILVFLTG+EEI+ C
Sbjct: 650 CPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCE 709
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ + +GD +G + ++P+YS LP +Q KIFEP P S RK+V +TNIAET
Sbjct: 710 ILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGS-------RKVVFATNIAET 762
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
S+TIDGI YV+DPGFAK +YN R +E L+VSPIS+A A+QR GRAGRT PGKC+RLYT
Sbjct: 763 SITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYT 822
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
E +F N++ T PEI R NL++T+L LK +GI+DL+ FDFMDPP ++ AL L +L
Sbjct: 823 ESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHL 882
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
+LDD+G LT +G++MS FP+DP +S+ L+ S CS+EI++I +MLSV N F RP++
Sbjct: 883 QSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDR 942
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
Q AD KA+F H GDHLTLLNVY ++Q N +C NF++ R LK A +V+ Q+
Sbjct: 943 QLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISM 1002
Query: 598 IMARFNLKL--CSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
I + LKL C +D + IRK ++G+FM A + Y T+ V +HPS
Sbjct: 1003 IFKKIGLKLISCHSDPDL------IRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPS 1056
Query: 656 NCLDHKP-EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
+ L K E+V+Y+ VLTSR ++ VT + +WL+++APH+Y
Sbjct: 1057 SSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFY 1099
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 632 bits (1629), Expect = e-180, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 461/681 (67%), Gaps = 29/681 (4%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I ++R+ LPV+ +++ + V++ N V+I+VGETGSGKTTQ+ Q++LE ++
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG------ 487
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
+I CTQPRRVAAMSV+RRVA+EM V +G++VGY+IRFEDC+S +T++KY+TDG+LLRE +
Sbjct: 488 LIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECL 547
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
D L++Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++A+KF +F G
Sbjct: 548 GDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGG 607
Query: 238 -APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDAC 296
P +PGR PVE+F+ + P DY++AA++ V IH+ GDIL+F+ G+E+IE C
Sbjct: 608 NCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTC 667
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAE 356
I +++ + D+ P+ V+P+YS LP +Q KIF+ AP GG RK +V+TNIAE
Sbjct: 668 EMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAP-----GGM--RKAIVATNIAE 719
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TSLT+DGI++VIDPGF K KVYNPR+ +++L + P+S+ASA+QR+GRAGRT PG+C+RLY
Sbjct: 720 TSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLY 779
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
TE+ F ++L T PEI R+NLAN VL LK LG+DDL+ F FMD P + ++ ++ L
Sbjct: 780 TERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWT 839
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
LGALD+ G LT MG KM EFPLDP +SKML+ S + CS+E+L+I +MLSVP F RP+
Sbjct: 840 LGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKG 899
Query: 537 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLV 596
++ AD K +F + DHLT LNVY ++ + WC DN+++ +ALK VR QL
Sbjct: 900 REEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLK 959
Query: 597 RIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSN 656
IM L L SN + +RK + + YF A L+ G+Y+ V+ LHP++
Sbjct: 960 EIMQDLKLPLISNGSE----WDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTS 1015
Query: 657 CL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQC------EA 707
L P++V+Y+E ++T++ +++ VT V WL ++ P +Y + Q E+
Sbjct: 1016 ALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKMES 1075
Query: 708 KRVLERLYRK-REKERENNRK 727
R +E + + RE ++E R+
Sbjct: 1076 VRTVETMEAEMREAQKEMERR 1096
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 627 bits (1616), Expect = e-178, Method: Compositional matrix adjust.
Identities = 302/647 (46%), Positives = 444/647 (68%), Gaps = 25/647 (3%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
ILE+R+ LP++ ++E L +++ N ++I+VGETGSGKTTQ+ Q++ E +
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG------ 578
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQPRRVAAMSV++RV+EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++
Sbjct: 579 MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESL 638
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++AEKF +F
Sbjct: 639 READLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGN 698
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE
Sbjct: 699 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 758
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+I + + + + + V+P+YS LP +Q KIF+ AP RK +V+TNIAET
Sbjct: 759 QIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 810
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAGRT PG+CFRLYT
Sbjct: 811 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 870
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L
Sbjct: 871 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 930
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 990
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
++ +D+ + +F + DHLT LNVY +K NN WC D+F++ +A++ VR QL
Sbjct: 991 EEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKD 1050
Query: 598 IMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
IM R +L C D++ +RK + A YF Q A L+ G+Y+ ++ HLHP+
Sbjct: 1051 IMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPT 1104
Query: 656 NCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
+ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1105 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 625 bits (1612), Expect = e-178, Method: Compositional matrix adjust.
Identities = 301/647 (46%), Positives = 444/647 (68%), Gaps = 25/647 (3%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
ILE+R+ LP++ ++E L +++ N ++I+VGETGSGKTTQ+ Q++ E +
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG------ 578
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQPRRVAAMSV++RV+EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++
Sbjct: 579 MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESL 638
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++AEKF +F
Sbjct: 639 READLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGN 698
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE
Sbjct: 699 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 758
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+I + + + + + V+P+YS LP +Q KIF+ AP RK +V+TNIAET
Sbjct: 759 QIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 810
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAGRT PG+CFRLYT
Sbjct: 811 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 870
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L
Sbjct: 871 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 930
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 990
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVR 597
++ +D+ + +F + DHL+ LNVY +K NN WC D+F++ +A++ VR QL
Sbjct: 991 EEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKD 1050
Query: 598 IMA--RFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPS 655
IM R +L C D++ +RK + A YF Q A L+ G+Y+ ++ HLHP+
Sbjct: 1051 IMVQQRMSLASCGTDWDI------VRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPT 1104
Query: 656 NCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
+ L + P++++Y+E V+T++ +++ VT V GEWL ++ P +Y +
Sbjct: 1105 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSV 1151
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 613 bits (1581), Expect = e-174, Method: Compositional matrix adjust.
Identities = 302/643 (46%), Positives = 442/643 (68%), Gaps = 22/643 (3%)
Query: 60 EKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMI 119
E+R+ LP + +E+ L V++ NQV+I+VGETGSGKTTQ+ QF+ E R MI
Sbjct: 487 EQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYE------DGYHRNGMI 540
Query: 120 ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTD 179
CTQPRRVAAMSV++RV+EEM V +G VGYSIRFED + TV+KY+TDG+LLRE++
Sbjct: 541 GCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQ 600
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
LE+Y VI++DEAHER+L TD+L GLLK+VL R D+KL+V SAT+ ++KF +F GAP
Sbjct: 601 NNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAP 660
Query: 240 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKI 299
+PGR +PV+I + + P DY+EAA+R V+QIH+ +P+GDILVF+TG+E+IE C I
Sbjct: 661 QFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEII 720
Query: 300 TKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSL 359
+ + D + ++P+YS +P +Q KIF+ A P RK+VV+TNIAETSL
Sbjct: 721 ADRLNQLHD-APRLSILPIYSQMPADLQAKIFDSAEPGV-------RKVVVATNIAETSL 772
Query: 360 TIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEK 419
T+ GI YV+D G+ K K+YN ++ +++L V+PIS+A+A+QR+GRAGRT PG +RLYTE
Sbjct: 773 TVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEM 832
Query: 420 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 479
++ ++ T PEI R+NL+NTVL LK LG++++ FDFMD P +TLM +L L LGA
Sbjct: 833 AYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGA 892
Query: 480 LDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQK 539
LD+ G LT +G+KMS FP+DP +SK+++ + Y C+ EI++I +MLSVP+ F RP+E +
Sbjct: 893 LDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAE 952
Query: 540 AADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIM 599
+D A+ +F + DHL LLN+Y +++N SWC +F++ + LK A ++RQQLV IM
Sbjct: 953 ESDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIM 1012
Query: 600 ARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC-- 657
++ + L S D+ + +R+ + + YF Q A + G+Y+ ++ HLH ++
Sbjct: 1013 SKQKISLES----VSDWDI-VRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLY 1067
Query: 658 -LDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
L + P++VIY+E VLTS+ ++ VT V WL + YY +
Sbjct: 1068 GLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSV 1110
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 584 bits (1506), Expect = e-166, Method: Compositional matrix adjust.
Identities = 300/701 (42%), Positives = 452/701 (64%), Gaps = 42/701 (5%)
Query: 31 GPGAMMNNNNSLINRWNG-----KPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVII 85
GPG ++ + +G PY+ I ++R+ LPV++ + L +++ Q ++
Sbjct: 17 GPGVSISEERQSLAENSGTTVVYNPYAA--LSIEQQRQKLPVFKLRNHILYLIENYQTVV 74
Query: 86 LVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIG 145
+VGETG GK+TQIPQ++ E T + R ++ TQPRRVAA++V+ RVAEE +G
Sbjct: 75 IVGETGCGKSTQIPQYLAEAG--WTAEGR---VVGVTQPRRVAAVTVAGRVAEERGAVLG 129
Query: 146 EEVGYSIRFEDCSSA-RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLF 204
EVGY IRF+DC+ T +K+LTDGML+RE M DPLL +Y VI+LDEAHERTL TD+
Sbjct: 130 HEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAI 189
Query: 205 GLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY----------GAPLMKVPGRLHPVEIFY 254
GLLK++ K R DL+L+V SATL+A+KF+ +F ++ V GR PV+IFY
Sbjct: 190 GLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFY 249
Query: 255 TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVG--- 311
Q P DY+++ + TVV+IH E GD+L FLTG+EE+E + ++ + + G
Sbjct: 250 LQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALA-RTGMKR 308
Query: 312 PVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPG 371
++V+P+Y+ LP Q K+FE RK++V+TN+AETS+TI GIVYVID G
Sbjct: 309 HLRVLPMYAGLPSFEQMKVFERVSRSV-------RKVIVATNVAETSITISGIVYVIDCG 361
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
F K + YNPR +E L+V P+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T P
Sbjct: 362 FVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVP 420
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MG 490
E+ RSNLA +L LK LGID+++ F FM PP +++++ALE+L LG LD D LTE +G
Sbjct: 421 EMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLG 480
Query: 491 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGH 550
+++EFPL+P +KML+ES + CS EILSI+AM+ + N FV P + A +F
Sbjct: 481 MRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAV 540
Query: 551 IDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSND 610
+GDHLT+LN+Y A+ ++N+D WC ++F+N++ L A VR+QL +++ +F + S++
Sbjct: 541 EEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSE 600
Query: 611 FNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYN 668
+ + + +++G+F A TG Y T++D+ +H+HP++ L + P WVIYN
Sbjct: 601 GDPD----LVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYN 656
Query: 669 EYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEAKR 709
E + TS+ ++R VT + WL+++APH+Y +AKR
Sbjct: 657 EVIQTSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKR 697
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 580 bits (1496), Expect = e-164, Method: Compositional matrix adjust.
Identities = 298/689 (43%), Positives = 448/689 (65%), Gaps = 42/689 (6%)
Query: 31 GPGAMMNNNNSLINRWNG-----KPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVII 85
GPG ++ + +G PY+ I ++R+ LPV++ + L +++ Q ++
Sbjct: 17 GPGVSISEERQSLAENSGTTVVYNPYAA--LSIEQQRQKLPVFKLRNHILYLIENYQTVV 74
Query: 86 LVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIG 145
+VGETG GK+TQIPQ++ E T + R ++ TQPRRVAA++V+ RVAEE +G
Sbjct: 75 IVGETGCGKSTQIPQYLAEAG--WTAEGR---VVGVTQPRRVAAVTVAGRVAEERGAVLG 129
Query: 146 EEVGYSIRFEDCSSA-RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLF 204
EVGY IRF+DC+ T +K+LTDGML+RE M DPLL +Y VI+LDEAHERTL TD+
Sbjct: 130 HEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAI 189
Query: 205 GLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY----------GAPLMKVPGRLHPVEIFY 254
GLLK++ K R DL+L+V SATL+A+KF+ +F ++ V GR PV+IFY
Sbjct: 190 GLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVGGRTFPVDIFY 249
Query: 255 TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVG--- 311
Q P DY+++ + TVV+IH E GDIL FLTG+EE+E + ++ + + G
Sbjct: 250 LQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALA-RTGMKR 308
Query: 312 PVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPG 371
++V+P+Y+ LP Q K+FE RK++V+TN+AETS+TI GIVYVID G
Sbjct: 309 HLRVLPMYAGLPSFEQMKVFERVSRSV-------RKVIVATNVAETSITISGIVYVIDCG 361
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
F K + YNPR +E L+V P+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T P
Sbjct: 362 FVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVP 420
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MG 490
E+ RSNLA +L LK LGID+++ F FM PP +++++ALE+L LG LD D LTE +G
Sbjct: 421 EMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLG 480
Query: 491 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGH 550
+++EFPL+P +KML+ES + CS EILSI+AM+ + N FV P + A +F
Sbjct: 481 MRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSQAIRVHRKFAV 540
Query: 551 IDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSND 610
+GDHLT+LNVY A+ ++N++ WC ++F+N++ L A VR+QL +++ +F + S++
Sbjct: 541 EEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSE 600
Query: 611 FNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNCL--DHKPEWVIYN 668
+ + + +++G+F A TG Y T++D+ +H+HP++ L + P WVIYN
Sbjct: 601 GDPDP----VLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYN 656
Query: 669 EYVLTSRNFIRTVTDVRGEWLIDIAPHYY 697
E + TS+ ++R VT + WL+++APH+Y
Sbjct: 657 EVIQTSKYYMRDVTAIESAWLLELAPHFY 685
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 566 bits (1458), Expect = e-160, Method: Compositional matrix adjust.
Identities = 292/664 (43%), Positives = 440/664 (66%), Gaps = 24/664 (3%)
Query: 37 NNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTT 96
++N+S R P ++ +ILE+RK+LP+W+ + Q ++ N+VI++VGETGSGK+T
Sbjct: 70 SDNSSPEKRSENSPSKRK--DILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKST 127
Query: 97 QIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFED 156
QIPQF+ E P ++ +A TQPRRVAA+++++RVA E +GE+VGYSIRF+D
Sbjct: 128 QIPQFL-----NECP-YAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDD 181
Query: 157 CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD 216
+S +T +KYLTDGMLLRE + DP+L +Y ++LDEAHERTL TD+L G +K+++K RP
Sbjct: 182 TTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPA 241
Query: 217 LKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 276
L++++MSATL AE+F +F GA + + GR +PV+I YT PE DYL+A +RT+ Q+H
Sbjct: 242 LRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTK 301
Query: 277 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPP 336
P GDILVFLTG++EIE I + + ++ PL+++LP Q ++F PA
Sbjct: 302 LPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALA 361
Query: 337 PSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
RK+V+STNIAETS+TI GI YVID G AK K +N ++ +ESL V PIS+++
Sbjct: 362 NH-------RKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSA 414
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QRSGRAGR G+C+R+YTE F+ L +T PEI R +L+ VLTLK G +D+++F
Sbjct: 415 AMQRSGRAGREAAGQCYRIYTEADFDK-LPKETIPEIKRIDLSQAVLTLKARGQNDVINF 473
Query: 457 DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
+MDPP+ E L+RALE L +GALDD+G++ ++G +MS PL P +++ ++ + ++NC +
Sbjct: 474 HYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLS 533
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP--SW 574
E++ + + LS + F+ P+E + A EA+ +F H +GD LT LN Y +++ D W
Sbjct: 534 EVIDVVSCLSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQW 593
Query: 575 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSN-DFNSRDYYVNIRKAMLAGYFMQVA 633
C NF+N RALK+ ++R+QL + +L S+ + NS N+ + L+GY A
Sbjct: 594 CSQNFINRRALKTILDIRKQLREHCLKDGWELNSSPEVNSE----NLLLSFLSGYITNTA 649
Query: 634 HLERTGQYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
L G Y T+ NQ + +HPS+ L K E ++Y+E V T+++++R V+ +R WL +
Sbjct: 650 LLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAV 709
Query: 693 APHY 696
APHY
Sbjct: 710 APHY 713
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 534 bits (1376), Expect = e-151, Method: Compositional matrix adjust.
Identities = 292/697 (41%), Positives = 444/697 (63%), Gaps = 37/697 (5%)
Query: 25 VKTNGVGPGAMMNNNNSLINRWNGKP------YSQRYYEILEKRKSLPVWQQKEEFLQVL 78
V +G + NNN ++ N K ++ +I ++ LPV++ + + L ++
Sbjct: 304 VLNTAMGEVLGLENNNKAKDKSNQKICDDTALFTPSKDDIKHTKEQLPVFRCRSQLLSLI 363
Query: 79 KANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAE 138
+ NQV++++GETGSGKTTQ+ Q++ E E R I TQPRRVAA+SV++RVA
Sbjct: 364 RENQVVVIIGETGSGKTTQLAQYLYE----EGYANDRGKSIVVTQPRRVAAISVAKRVAM 419
Query: 139 EMDVTIGEEVGYSIRFEDCSSAR-TVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERT 197
EM V +G+EVGYSIRFED + + T LK++TDG+LLRE + D L++Y +++DEAHER+
Sbjct: 420 EMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSCVIIDEAHERS 479
Query: 198 LATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
L TD+L G K +L R DLKL++ SAT+ A+KF +F AP +PGR PV+ YT
Sbjct: 480 LNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSN 539
Query: 258 PERDYLEAAIRTVVQIHMCE--PSGDILVFLTGEEEIEDACRKITKEI---------TNM 306
P +DY+EAA+ V+IH+ SGDIL+F+TG+E+IE + ++ T
Sbjct: 540 PVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTAN 599
Query: 307 GDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVY 366
+++ ++++P+YS LP +Q KIF+ + RKI+++TNIAETSLTI GI Y
Sbjct: 600 FEEINDIEILPIYSALPADLQFKIFQ-------DLHGTKRKIIIATNIAETSLTIKGIRY 652
Query: 367 VIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQ 426
VID G++K KVYNP++ ++SL+++PISKA+A QRSGRAGRT PG +RLYTE +F D+
Sbjct: 653 VIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMY 712
Query: 427 PQTYPEILRSNLANTVLTLKKLGI-DDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN 485
QT PEI R+NL+NT+L LK L + D+L F F+D P +T + +L L ++GA+D G
Sbjct: 713 LQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQ 772
Query: 486 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAK 545
LT +G +M++FPL P +SK+L+ + + CS+E+L+I +MLSVP F RP+E QK AD A+
Sbjct: 773 LTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPKERQKEADIAR 832
Query: 546 ARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK 605
+F DHLTLLNV+ ++ NN WC +FV +++L A ++R QL+ I+ +
Sbjct: 833 NKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQLLTILKSQKIP 892
Query: 606 LCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLHPSNC---LDHKP 662
+ S + +D+ + I+K + +G+ Q A + Y+ +K V LHP++ L P
Sbjct: 893 VIS---SGKDWDI-IKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSALHGLGDLP 948
Query: 663 EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDL 699
+V+Y+E ++TS+ +I VT V WL++ YD+
Sbjct: 949 PYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDI 985
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 534 bits (1376), Expect = e-151, Method: Compositional matrix adjust.
Identities = 286/665 (43%), Positives = 419/665 (63%), Gaps = 37/665 (5%)
Query: 48 GKPYSQRYYEILE-KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGV 106
+P + Y E +E +R+SLP++Q + + L L+ +L+GETGSGKTTQIPQ++ EG
Sbjct: 56 AQPSASPYPEAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG- 114
Query: 107 DIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKY 166
R+ +IA TQPRRVAA+S++ RV++E +G+ VGY++RF+D +S T +K+
Sbjct: 115 -----GISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKF 169
Query: 167 LTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD-----LKLVV 221
LTDGMLLREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R + LK++V
Sbjct: 170 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIV 229
Query: 222 MSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSG- 280
MSAT++ + F YF GAP++ + GR HP+++FYT++P+ DYL AA+ +V QIH PS
Sbjct: 230 MSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQ 289
Query: 281 DILVFLTGEEEIE---DACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPP 337
DILVFLTG+EEIE CR I K ++ D + V+PLY++LP A Q ++F
Sbjct: 290 DILVFLTGQEEIEAMSKTCRDIAK---HLPDGCPAMLVLPLYASLPYAQQLRVF------ 340
Query: 338 SKEGGPPG-RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
+G P G RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK
Sbjct: 341 --QGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQ 398
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QR+GRAGR G C+RLYTE F T PEI R NLA+ +L L + + +++ F
Sbjct: 399 AWQRTGRAGREDSGICYRLYTEDEFEK-FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTF 457
Query: 457 DFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN 513
DFM P+P+ + A+ L+ LGAL DD LT MG KM+ FPL+P+ +K ++ SPK++
Sbjct: 458 DFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFH 517
Query: 514 CSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS 573
C+ EIL+I ++LSV + P ++ + +F +GDH+TLLN+Y +K +
Sbjct: 518 CTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKD 577
Query: 574 WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVA 633
WC +NFVN + + VR QL I + ++ + S SR ++R+ + FM A
Sbjct: 578 WCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIAS----SRGDVESVRRCLAHSLFMSTA 633
Query: 634 HLERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
L+ G Y T +Q V +HPS+ L H KP V+Y E + T++ ++R + + +WL +
Sbjct: 634 ELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEA 693
Query: 693 APHYY 697
AP Y+
Sbjct: 694 APEYF 698
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 531 bits (1368), Expect = e-150, Method: Compositional matrix adjust.
Identities = 295/671 (43%), Positives = 424/671 (63%), Gaps = 44/671 (6%)
Query: 53 QRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPD 112
+R I E RK LPV Q K+E LQ +K NQV+I++GETGSGKTTQ+PQ+++E +
Sbjct: 211 KRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTD--- 267
Query: 113 RRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSA-RTVLKYLTDGM 171
+ K+ IA TQPRRVAA SV+ RVA+EM+V +G+EVGY IRFED ++ +TVLKY+TDGM
Sbjct: 268 -QGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGM 326
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLRE +TD L +Y I++DEAHERTLATD+L GLLK++L RP LKL++ SAT+ A+KF
Sbjct: 327 LLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKF 386
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDILVFLTGEE 290
+F P+ VPGR +PV+I YT +PE +Y+ AAI T+ QIH + GDILVFLTG+E
Sbjct: 387 SEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQE 446
Query: 291 EIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVV 350
EIE K+ + ++ +G + + + P+Y+ LP Q KIF+P P RK+V+
Sbjct: 447 EIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENC-------RKVVL 499
Query: 351 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPG 410
+TNIAETSLTIDGI YVIDPGF K+ Y P + LL P S+AS QR+GRAGR PG
Sbjct: 500 ATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPG 559
Query: 411 KCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 470
KCFR++T+ S+ ++L+ PEI R+NL+NTVL L LG+ DL+ F MD P+ TL ++
Sbjct: 560 KCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKS 619
Query: 471 LEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKY-NCSN---EILSISAML- 525
LE L LGAL+ G +T +G+ M EFP +P+ +K+L + + C E L+I +ML
Sbjct: 620 LENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLH 679
Query: 526 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRAL 585
P+ F+ QK D A + ++ DH+ L +++ ++ + SWC D+ + + +
Sbjct: 680 ETPSLFI----GQK-RDAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTM 734
Query: 586 KSADNVRQQLVRIMARFNLKLCSND-----FNSRDYYVNIR--KAMLAGYFMQVAHLERT 638
N+R QL R + L + ND + Y+N R + ++G+ M + L T
Sbjct: 735 LRVRNIRNQLFRCSEKVGL-VEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPT 793
Query: 639 GQYLTVKDNQV---VHLHPSNCL--DHK------PEWVIYNEYVLTSRNFIRTVTDV-RG 686
G Y T+ + V +HP++ L +HK ++V+Y + +LTS+ FIR + +
Sbjct: 794 G-YQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKE 852
Query: 687 EWLIDIAPHYY 697
EWLID+ P +
Sbjct: 853 EWLIDMVPQIF 863
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 530 bits (1365), Expect = e-149, Method: Compositional matrix adjust.
Identities = 280/680 (41%), Positives = 423/680 (62%), Gaps = 38/680 (5%)
Query: 47 NGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGV 106
+ PY+ I ++R LP+++ + L + + + II+VGETG GK+TQ+PQF+LE
Sbjct: 61 HNNPYAS--LNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAG 118
Query: 107 DIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKY 166
D R+ I TQPRRVA ++++ RVAEE D +G +VGY++RF+D S T +K+
Sbjct: 119 --WAADGRQ---IVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKF 173
Query: 167 LTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATL 226
+TDG+LLRE + DPLL +Y +I++DEAHER+ TD+L GLL+++++ R DL+++V SATL
Sbjct: 174 MTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATL 233
Query: 227 EAEKFQGYFY----------GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 276
+AE F+ +F A ++ V GR HPV + +T+ DY ++A+ TV+ IH
Sbjct: 234 DAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKH 293
Query: 277 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPP 336
E GDILVFLTG++E+ED C K+ +E+ + VVP Y LP Q K F+ P
Sbjct: 294 ENPGDILVFLTGQDEVEDVCEKL-RELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPH 352
Query: 337 PSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
+ RK+VV+TNIAE S+TI GI YVID G+ K + + VE+L+ +SKAS
Sbjct: 353 GT-------RKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKAS 405
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QR+GRAGR +PGKC+RLY E F T PEI R +A+T+L LK LG+ ++ F
Sbjct: 406 AEQRAGRAGRIRPGKCYRLYPESEFER-FAEGTVPEIQRCQMASTILQLKALGVQNVHRF 464
Query: 457 DFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCS 515
++ PP ++ LE+L LGA+D+ LT +G +M+EFPL P SK L++S ++ CS
Sbjct: 465 HYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCS 524
Query: 516 NEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWC 575
E+++I AM+ + + F+ P + AD + +F +GDH+T+LNV+ + +N WC
Sbjct: 525 TEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWC 584
Query: 576 YDNFVNHRALKSADNVRQQLVRIMARFNLKLCSND--FNSRDYYVNIRKAMLAGYFMQVA 633
D+FVN+R L ADNVR QLVR++ RF ++ S+ N + NIR+ ++ G+F Q A
Sbjct: 585 SDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSE---NIRQCLVTGFFSQAA 641
Query: 634 HLERTGQYLTVKDNQVVHLHPSNCLDHK---PEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
TG+Y+TVK++ +++ + + K P+WVI+ E + S IR VT + EWL
Sbjct: 642 QYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVMQDS---IRDVTVIEPEWLY 698
Query: 691 DIAPHYYDLSNFPQCEAKRV 710
++APHYY+ + KR+
Sbjct: 699 ELAPHYYEFGTEGELAEKRM 718
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 285/665 (42%), Positives = 417/665 (62%), Gaps = 37/665 (5%)
Query: 48 GKPYSQRYYEILE-KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGV 106
+P + Y E LE +R+SLP+++ + + L L+ +L+GETGSGKTTQIPQ++ EG
Sbjct: 47 AQPSASPYREALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG- 105
Query: 107 DIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKY 166
R+ +IA TQPRRVAA+S++ RV++E +G+ VGY++RFED +S T +K+
Sbjct: 106 -----GISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKF 160
Query: 167 LTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD-----LKLVV 221
LTDGMLLREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R + LK++V
Sbjct: 161 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIV 220
Query: 222 MSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SG 280
MSAT++ + F YF AP++ + GR HP++IFYT++P++DYL AA+ +V QIH P S
Sbjct: 221 MSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQ 280
Query: 281 DILVFLTGEEEIE---DACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPP 337
DILVFLTG+EEIE CR I + ++ D + V+PLY++LP + Q ++F
Sbjct: 281 DILVFLTGQEEIEAMSKTCRDIAR---HLPDGCPSMLVLPLYASLPYSQQLRVF------ 331
Query: 338 SKEGGPPG-RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
+G P G RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK
Sbjct: 332 --QGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQ 389
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QR+GRAGR G C+RLYTE F + T PEI R NLA+ +L L + + +++ F
Sbjct: 390 AWQRTGRAGREDSGICYRLYTEDEFEK-FEKMTVPEIQRCNLASVILQLLAMKVPNVLTF 448
Query: 457 DFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN 513
DFM P+P+ + A+ L+ LGAL DD LT +G KM+ FPL+P+ +K ++ S K++
Sbjct: 449 DFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFH 508
Query: 514 CSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS 573
C+ EIL+I ++LSV + P + + +F +GDH+TLLN+Y +K +
Sbjct: 509 CTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKD 568
Query: 574 WCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVA 633
WC +NFVN + + VR QL I + ++ + S SR ++R+ M FM A
Sbjct: 569 WCKENFVNSKNMLLVAEVRAQLREICLKMSMPIMS----SRGDMESVRRCMAHSLFMNTA 624
Query: 634 HLERTGQYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDI 692
L+ G Y T +Q V +HPS+ L H KP V+Y + T++ ++R + V EWL +
Sbjct: 625 ELQTDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEA 684
Query: 693 APHYY 697
AP Y+
Sbjct: 685 APDYF 689
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust.
Identities = 277/683 (40%), Positives = 431/683 (63%), Gaps = 21/683 (3%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
+N ++G PYS RYY++L++R+ LP+W++K F++ L NQV+++ G++ GK++Q+PQ+
Sbjct: 40 LNPFDGLPYSSRYYKLLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWC 99
Query: 103 LEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSART 162
E + + CTQ + A+ ++ RVA+EMDV IG EVGY I FE+C + T
Sbjct: 100 AEYC---LSIHYQHGGVICTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTET 156
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+L+Y TD ML RE M++P L Y VI+LD+ HER+LATDVL GLLK+VL RP+LKL+V
Sbjct: 157 ILRYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVN 216
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
+ L K Y+ P+++V + HPVE+ Y ++D E+ IR + +IH GD+
Sbjct: 217 CSPLLTSKLSSYYGDVPVIEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDV 275
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGG 342
+VFL E++IE + +E +N+ VG + V+PLY P + +F P K
Sbjct: 276 VVFLACEQDIEKTYELVCQEGSNLNPDVGDLVVIPLY----PKEKCSLFRPVDETEKRCQ 331
Query: 343 PPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
R++V++T+ E+ + + +VID G +++VYNPR+R SL++ PIS++ A R
Sbjct: 332 VYQRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQ 391
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
G + GK F LYTE+ + D++P E+ +NL + VL +K++ I L DFM+ P
Sbjct: 392 LLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRP 451
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
APE+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+
Sbjct: 452 APESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIA 511
Query: 523 AMLSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN-----NED--PSW 574
AM++ P+CF+ P A++AA F H +GDH TL+NVY+AY+ NE W
Sbjct: 512 AMVTAPSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMW 571
Query: 575 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 634
C+D F++ AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A
Sbjct: 572 CHDCFLSCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIAR 631
Query: 635 -LERTGQYLTVKDNQVVHLHP--SNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
++ +G YL + QV LHP S + K PEWV+++++ ++ N+IR + V E +
Sbjct: 632 DVDGSGNYLMLTHKQVAQLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFM 691
Query: 691 DIAPHYYDLSNFPQCEAKRVLER 713
+ P YY SN P E+K +L++
Sbjct: 692 QLVPQYY-FSNLPPSESKDILQQ 713
>sp|Q7L7V1|DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Homo sapiens GN=DHX32 PE=1 SV=1
Length = 743
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 273/684 (39%), Positives = 427/684 (62%), Gaps = 22/684 (3%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
+N ++G PYS RYY++L++R+ LP+W++K F++ L NQ++I+ G+ GK+ Q+PQ+
Sbjct: 40 LNPFDGLPYSSRYYKLLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWC 99
Query: 103 LEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSART 162
E + + CTQ + + ++ RVA+EMDV IG EVGY I FE+C + T
Sbjct: 100 AEYC---LSIHYQHGGVICTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNET 156
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+L+Y TD ML RE M++P L Y VI+LD+ HER++ATDVL GLLK+VL RP+LKL++
Sbjct: 157 ILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIIN 216
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
S+ K Y+ P+++V + HPVE+ Y E ++D E+ +R + +IH GDI
Sbjct: 217 SSPHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDI 275
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGG 342
+VFL E++IE C + + +N+ +G + VVPLY P + +F+P K
Sbjct: 276 VVFLACEQDIEKVCETVYQG-SNLNPDLGELVVVPLY----PKEKCSLFKPLDETEKRCQ 330
Query: 343 PPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
R++V++T+ E + + + +VID G ++KVYNPR+R SL++ PIS++ A R
Sbjct: 331 VYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQ 390
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
G + GK F LYTE+ + D+ P E+ +NL + VL +K++ I L H DFM+ P
Sbjct: 391 ILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRP 450
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
APE+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+
Sbjct: 451 APESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIA 510
Query: 523 AMLSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-------W 574
AM++ PNCF P A++AA F H +GDH TL+++Y AY+ + S W
Sbjct: 511 AMVTAPNCFSHVPHGAEEAALTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKW 570
Query: 575 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 634
C D F+N AL+ AD +R +L+ I+ R L F S++ +NI+KA+L+GYFMQ+A
Sbjct: 571 CRDYFLNCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIAR 630
Query: 635 -LERTGQYLTVKDNQVVHLHP---SNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
++ +G YL + QV LHP + PEWV+++++ ++ N+IR +++ E +
Sbjct: 631 DVDGSGNYLMLTHKQVAQLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFM 690
Query: 691 DIAPHYYDLSNFPQCEAKRVLERL 714
+ P YY SN P E+K +L+++
Sbjct: 691 QLVPQYY-FSNLPPSESKDILQQV 713
>sp|Q5XH12|DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Xenopus laevis GN=dhx32 PE=2 SV=1
Length = 748
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 269/712 (37%), Positives = 429/712 (60%), Gaps = 25/712 (3%)
Query: 14 VVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEE 73
+ DE S + ++ V + N+ +N ++G PYS R+Y++L++R++LP+W+ K +
Sbjct: 16 ISDEKSCCLDVTDSSDVEGDEL---NDLELNPFDGLPYSSRFYKLLKERETLPIWKIKYD 72
Query: 74 FLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVS 133
FL+ L NQ++++ SGK++QIPQ+ E + + CTQ + A+ ++
Sbjct: 73 FLEHLAHNQIVVVSAGPKSGKSSQIPQWCAEYC---LAGHYQHGAVVCTQAHKQTAVWLA 129
Query: 134 RRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEA 193
RVA+EMDV IG EVGY + FE+C ++ T+L+Y TD ML RE M++PLL Y V+++D+
Sbjct: 130 MRVADEMDVNIGHEVGYIVPFENCCTSETILRYCTDEMLRREMMSNPLLSSYGVVIIDDV 189
Query: 194 HERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIF 253
+ER ++TDVL LK + +RP+LK+V+++ + Y+ APL++ H VE
Sbjct: 190 YERFVSTDVLLSFLKVIAVSRPELKVVIITCPSLSGTLVSYYGNAPLVEAENT-HSVESV 248
Query: 254 YTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPV 313
YT RDY +A+R + +IH + GDI+VFL EEEI+ A I +E +M ++G +
Sbjct: 249 YTTSLPRDYFHSALRLLFEIHHTKEKGDIVVFLACEEEIKRAYEHIKQEALHMNPELGEL 308
Query: 314 KVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFA 373
+ LY P + P P RK+V++T++ E+ + + I +VID G
Sbjct: 309 MPIALY----PHQSISDYIPYEELDDNSKNPKRKVVLTTSLGESLIWMKNIFFVIDVGIE 364
Query: 374 KQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEI 433
K+KVYN R+R ESL+ PISK A R + GK F LY E F ++++P ++
Sbjct: 365 KRKVYNTRIRAESLVTQPISKVRAKMRKHILSSSSEGKLFCLYPE-DFAHEMKPFLTAKV 423
Query: 434 LRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKM 493
NL + VL LK++ I L H DF++ P PE+LM+ALE L+YL ALD+DGNL+E G M
Sbjct: 424 EECNLISMVLFLKRMDIAGLAHCDFINRPDPESLMQALEDLDYLAALDNDGNLSEFGIIM 483
Query: 494 SEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVR-PREAQKAADEAKARFGHID 552
SEFPLDPQ+SK ++ + +++C +E+L+++AM++ PNCF+ P EA++ K +F H +
Sbjct: 484 SEFPLDPQLSKSILAACEFDCVDEMLTLAAMVTAPNCFIDLPPEAKELDLIGKGKFFHPE 543
Query: 553 GDHLTLLNVYHAYKQ---NNED----PSWCYDNFVNHRALKSADNVRQQLVRIMARFNLK 605
GDH TL+N+Y+ Y+Q NN WC ++ ++ AL+ A +R +L+ IM R L
Sbjct: 544 GDHFTLINIYNEYEQMKRNNASQYDVEKWCQNHCLSFVALEMARAIRNELLDIMRRIELP 603
Query: 606 LCSNDFNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVKDNQVVHLHPSN--CLDHK- 661
L F S + NI+K++L+GYFMQ+A ++ G Y+ + QV LHP + C K
Sbjct: 604 LTGPAFGSDENVTNIKKSLLSGYFMQIARDVDGLGNYIMLTHKQVGQLHPDSGFCNSAKV 663
Query: 662 PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEAKRVLER 713
PEWV+++E+ ++ R+ IR V+++ ++ P YY SN P E K +L++
Sbjct: 664 PEWVLFHEFSVSERSCIRIVSEISPNLFMEFVPPYY-FSNLPPSETKDLLQQ 714
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 482 bits (1241), Expect = e-135, Method: Compositional matrix adjust.
Identities = 273/702 (38%), Positives = 421/702 (59%), Gaps = 60/702 (8%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
PR+VAA+SV++RVAEEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLT 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACRKITKEITNMG-------DQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPG 345
E +C + + ++ + + ++P Y ++ Q++IF P PP
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGI------- 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++++ +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP------REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SV N F+RP +EA++ E A+ G + D TL ++ K + SWC ++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 577
Query: 580 VNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDY----YVNIRKAMLAGYFMQVAHL 635
++ R L SA V QL ++ + + +DF + + +R+ + AGYF VA
Sbjct: 578 IHWRCLFSAFRVEAQLRELIRKLKQQ---SDFPKETFEGPKHEVLRRCLCAGYFKNVAR- 633
Query: 636 ERTGQYLTVKDNQV--VHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
G+ D + VH+HPS+ L + K EW+I++E ++T++ + R V +R EW+
Sbjct: 634 RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVR 693
Query: 691 DIAP-----HYYDLSNFPQCEAKRVLERLYRKREKERENNRK 727
D+ P + +DLS+ A+R + R+R +EN ++
Sbjct: 694 DLLPKLHEFNAHDLSSV----ARREVREDARRRWTNKENVKQ 731
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/698 (38%), Positives = 417/698 (59%), Gaps = 52/698 (7%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
PR+VAA+SV++RVAEEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLN 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRP-----DLKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ +++ LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACRKITKEITNMG-------DQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPG 345
E +C + + ++ + + ++P Y ++ Q++IF P PP
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGI------- 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++ + +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP------REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SV N F+RP +EA++ E A+ G + D TL ++ K + SWC ++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQKHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 577
Query: 580 VNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDY----YVNIRKAMLAGYFMQVAHL 635
++ R L SA V QL ++ + + +DF + + +R+ + AGYF VA
Sbjct: 578 IHWRCLFSAFRVEAQLRELIRKLKQQ---SDFPRETFEGPKHEVLRRCLCAGYFKNVAR- 633
Query: 636 ERTGQYLTVKDNQV--VHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
G+ D + VH+HPS+ L + K EW+I++E ++T++ + R V +R EW+
Sbjct: 634 RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVR 693
Query: 691 DIAPHYYDLSNFPQCE-AKRVLERLYRKREKERENNRK 727
D+ P ++L+ A+R + R++ +EN ++
Sbjct: 694 DLLPKLHELNAHDLSSVARREMRDDARRKWTNKENVKQ 731
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 272/702 (38%), Positives = 421/702 (59%), Gaps = 60/702 (8%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
PR+VAA+SV++RVAEEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLT 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACRKITKEITNMG-------DQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPG 345
E +C + + ++ + + ++P Y ++ Q++IF P PP
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGI------- 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++++ +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP------REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SV N F+RP +EA++ E A+ G + D TL ++ K + SWC ++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 577
Query: 580 VNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDY----YVNIRKAMLAGYFMQVAHL 635
++ R L SA V QL ++ + + +DF + + +R+ + AGYF VA
Sbjct: 578 IHWRCLFSAFRVEAQLRELIRKLKQQ---SDFPRETFEGPKHEVLRRCLCAGYFKNVAR- 633
Query: 636 ERTGQYLTVKDNQV--VHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
G+ D + VH+HPS+ L + K EW++++E ++T++ + R V +R EW+
Sbjct: 634 RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIVFHEVLVTTKVYARIVCPIRYEWVR 693
Query: 691 DIAP-----HYYDLSNFPQCEAKRVLERLYRKREKERENNRK 727
D+ P + +DLS+ A+R + R+R +EN ++
Sbjct: 694 DLLPKLHEFNAHDLSSV----ARREVREDARRRWTNKENVKQ 731
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/698 (38%), Positives = 418/698 (59%), Gaps = 52/698 (7%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
PR+VAA+SV++RVAEEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLS 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRP-----DLKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ +++ LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACRKITKEITNMG-------DQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPG 345
E +C + + ++ + + ++P Y ++ Q++IF P PP
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGI------- 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y+++ ++ + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++ + +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP------REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNF 579
SV N F+RP +EA++ E A+ G + D TL ++ K + SWC ++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSSGAPASWCQKHW 577
Query: 580 VNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDY----YVNIRKAMLAGYFMQVAHL 635
++ R L SA V QL ++ + + +DF + + +R+ + AGYF VA
Sbjct: 578 IHWRCLFSAFRVEAQLRELIRKLKQQ---SDFPRETFEGPKHEVLRRCLCAGYFKNVAR- 633
Query: 636 ERTGQYLTVKDNQV--VHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLI 690
G+ D + VH+HPS+ L + K EW+I++E ++T++ + R V +R EW+
Sbjct: 634 RSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVR 693
Query: 691 DIAPHYYDLSNFPQCE-AKRVLERLYRKREKERENNRK 727
D+ P ++L+ A+R + R++ +EN ++
Sbjct: 694 DLLPKLHELNAHDLSSVARREMREDARRKWTNKENVKQ 731
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/638 (40%), Positives = 393/638 (61%), Gaps = 28/638 (4%)
Query: 61 KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIA 120
++K LP+ + + + L ++ NQ+ I++G TG GKTTQIPQF+ E + +I
Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEA-----GWASQNGIIG 75
Query: 121 CTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDP 180
CTQPRR+ A SVS RV+ E++ G GYSI+F+ S +T +KY+TDG+LL E DP
Sbjct: 76 CTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDP 135
Query: 181 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPL 240
LLERY +++LDE HERTL+TD+L G+LK +L+ R D +LV+ SA+++A K +F +
Sbjct: 136 LLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKV 195
Query: 241 --MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRK 298
M + G+L PVE + Q+P +Y+++AI TV+ I+ P GDILVFL+G +EIE +K
Sbjct: 196 CTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKK 255
Query: 299 ITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETS 358
I + + + + +PL++ L Q ++F +G RK++ STNIAETS
Sbjct: 256 IEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIY-----DGD--FRKVIFSTNIAETS 308
Query: 359 LTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTE 418
+TIDGIVYV+D GF KQ++YNP R L+ PISK+SA QRSGRAGRT GK FRLYTE
Sbjct: 309 ITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTE 368
Query: 419 KSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLG 478
K++ + ++ + +IL +++ VL LK LG+ +++ F F P LM ALE L LG
Sbjct: 369 KAY-SLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLG 427
Query: 479 ALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
LD+ GNLT+ +G ++S LD +SK L+ S ++ C++EILSI+++L+ F P +
Sbjct: 428 VLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSS 487
Query: 538 QKA-ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLV 596
K A A + F +GD +T LNV+ ++ N +D WC N++N++ L+ A ++R LV
Sbjct: 488 SKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLV 547
Query: 597 RIMARFNL----KLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHL 652
R + +F++ +L S+D + I K +L G+ VAHL+ G Y T+ QV
Sbjct: 548 RFLNKFSIPTAQRLPSSDCS------KILKCLLDGFVRNVAHLQNDGSYKTIGGKQVWLD 601
Query: 653 HPSNCLDHKPEWVIYNEYVLT-SRNFIRTVTDVRGEWL 689
S + K W++Y+ V + ++ F++ ++ + WL
Sbjct: 602 SSSVLHEKKTPWIMYSSAVESETQIFVKNISKIESFWL 639
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 270/704 (38%), Positives = 408/704 (57%), Gaps = 46/704 (6%)
Query: 21 SAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQ---RYYEILEKRKSLPVWQQKEEFLQV 77
++K+VK N G G +++ S N+ N Y R ++L+ R++LPV+Q K E +
Sbjct: 36 ASKIVKFNDSGEGDHVSDQRS--NKENVLTYKSLKSRASDLLKMRETLPVYQHKREIMSY 93
Query: 78 LKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVA 137
+++N V +L+GETGSGK+TQIPQFVLE + D ++ IA TQPRRVAA++++ RVA
Sbjct: 94 IESNPVTVLIGETGSGKSTQIPQFVLE----KLYDTKKHGSIAVTQPRRVAAINLATRVA 149
Query: 138 EEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERT 197
+E +GE+VGYS+RF++ ++ RT LKYLTDGMLLRE M + L Y VIV+DEAHERT
Sbjct: 150 QEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERT 209
Query: 198 LATDVLFGLLKEVLKN-RPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQ 256
+ TD++ G LK +++ RPDL+++VMSATL+AEKF +F AP++ V GR V+ +Y +
Sbjct: 210 VLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLK 269
Query: 257 EPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVV 316
P D ++A IR +QI+ E GDIL FL G+EEI+ A + K + D+ PV ++
Sbjct: 270 APTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDE-APVPLI 328
Query: 317 ---PLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFA 373
PLY+ LP Q +F P RK+V STNIAETS+TI G+ +V+D G
Sbjct: 329 VPYPLYAALPAVQQSLVFAPIKGFK-------RKVVFSTNIAETSVTISGVKFVVDSGLR 381
Query: 374 KQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEI 433
K KV+ ++ + +LL PIS+ASA QRSGRAGR GK FRLY E + L Q+ PEI
Sbjct: 382 KVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYVK-LPKQSEPEI 440
Query: 434 LRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKM 493
RS++ + VL LK+ G+DDL+++ + + P E ++ L+ L LGALD G +T+ G++M
Sbjct: 441 ARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRGQQM 500
Query: 494 SEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKAR------ 547
+ PL P +S +L+++ + C ++++ I + LSV N + P ++ DE R
Sbjct: 501 ALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEER--DEVNERRLSLCN 558
Query: 548 FGHIDGDHLTLLNVYHAY--------KQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIM 599
G GD + L ++ Y ++E WC ++ R K+ VR QL
Sbjct: 559 AGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYC 618
Query: 600 ARFNLKLCSNDFNSR------DYYVNIRKAMLAGYFMQVAHLERTGQYLTVKDNQVVHLH 653
R + D S+ + I K L G+ A Y TV + + +H
Sbjct: 619 KRLFSSISEEDEESKKIGEDGELISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIH 678
Query: 654 PSNCL--DHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPH 695
PS+ L + ++Y EYV T++ + R V+ + WL ++ +
Sbjct: 679 PSSMLFMNKSCPGIMYTEYVFTTKGYARNVSRIELSWLQEVVTN 722
>sp|Q924H9|DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1
Length = 718
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/711 (35%), Positives = 417/711 (58%), Gaps = 36/711 (5%)
Query: 20 VSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLK 79
+++ L + + + PG + +N ++G P+S YYE+LE+R++LP+W + FL+ L+
Sbjct: 1 MASGLAEESELSPG----ESELAVNPFDGLPFSSCYYELLEQRRALPIWAARFLFLEHLE 56
Query: 80 ANQ--VIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVA 137
++ V+++ G+ GSGK+TQIPQ+ E + + TQP +AAMS++ RVA
Sbjct: 57 SSPTGVVLVSGDPGSGKSTQIPQWCAE---FALARGFQTGQVTVTQPYPLAAMSLASRVA 113
Query: 138 EEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERT 197
+EMD+T+G E+GYSI EDC+ T+L++ D + L+E + + V++LDEA ER+
Sbjct: 114 DEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGAWSVLILDEAQERS 173
Query: 198 LATDVLFGLLKEV-LKNRP-DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRL--HPVEIF 253
+A+D+L GLL++ L+N P D ++VV++ KFQ ++ +P+++VP P +
Sbjct: 174 VASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFWGNSPIVRVPREPGGDPT-LA 232
Query: 254 YTQEPERDYLEAAIRTVVQI-HMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGP 312
Y D +EAA + V+++ E GD+LV+L EEEI C ++ E+ + P
Sbjct: 233 YKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISLCCESLSGEMGTLAVPGPP 292
Query: 313 VKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGF 372
+V+PL+ A+Q ++E + RKIVV+ +A+ S ++ I +VID G
Sbjct: 293 PRVLPLHPGCAQAIQ-TVYE-------DTDVSVRKIVVTHWLADFSFSLPSIQHVIDSGL 344
Query: 373 AKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPE 432
+ VYNPR+R ES ++ PISK A R RA PG C RLY++ + + P +P+
Sbjct: 345 ELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKSTLELEAPPLPHPK 404
Query: 433 ILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEK 492
+ NL++ VL L + I + F+D PAPE LMRALE L+YL AL+DDG L+++G
Sbjct: 405 VCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAALNDDGELSDLGVI 464
Query: 493 MSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKAR--FGH 550
+SEFPL P+++K L+ S ++NC +E+L+++AML+ F RP +A EA R H
Sbjct: 465 LSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRP---PLSAGEAALRRALEH 521
Query: 551 IDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSND 610
DGDH +L+ VY A+ Q+ D +WC +N +L A +R +LV +M R L L
Sbjct: 522 ADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVELMQRIELPLSQPA 581
Query: 611 FNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVKDNQVVHLHPSNCLDHK------PE 663
F S +++KA+L+GYF++VA + TG YL + V L P ++ P
Sbjct: 582 FGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCSYRNRRTPAQPPT 641
Query: 664 WVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEAKRVLERL 714
WV+Y+ + ++ N + V++++ E L+++AP Y+ LSN P E++ +L +L
Sbjct: 642 WVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYF-LSNLPPSESRDLLNQL 691
>sp|Q8TE96|DQX1_HUMAN ATP-dependent RNA helicase DQX1 OS=Homo sapiens GN=DQX1 PE=2 SV=2
Length = 717
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 258/712 (36%), Positives = 414/712 (58%), Gaps = 37/712 (5%)
Query: 18 TSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQV 77
TS +L + G PG + +N ++G P+S RYYE+L++R++LP+W + FL+
Sbjct: 2 TSQPLRLAEEYGPSPG----ESELAVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQ 57
Query: 78 LKANQ--VIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRR 135
L++N V+++ GE GSGK+TQIPQ+ E +K + TQP +AA S++ R
Sbjct: 58 LESNPTGVVLVSGEPGSGKSTQIPQWCAE---FALARGFQKGQVTVTQPYPLAARSLALR 114
Query: 136 VAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHE 195
VA+EMD+T+G EVGYSI EDC+ T+L++ D +LL+E + + V+VLDEA E
Sbjct: 115 VADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQE 174
Query: 196 RTLATDVLFGLLKEV-LKNRP-DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRL--HPVE 251
R++A+D L GLL++ L+ P DL++VV++ K + ++ P++ +P P
Sbjct: 175 RSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIVHIPREPGERPSP 234
Query: 252 IFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVG 311
I++ P D +EAA + V+++ E GD+LVFL EEEI C +++E+ ++ Q
Sbjct: 235 IYWDTIPP-DRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGL 293
Query: 312 PVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPG 371
P +V+PL+ A+Q ++E RK+VV+ +A+ S ++ I +VID G
Sbjct: 294 PPRVLPLHPDCGRAVQ-AVYEDMD---------ARKVVVTHWLADFSFSLPSIQHVIDSG 343
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
+ VYNPR+R E ++ PISK A R RA PG C LY + + P P
Sbjct: 344 LELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQP 403
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
+ NL++ VL LK+ I + F+D PAPE LM+ALE L+YL ALDDDG+L+++G
Sbjct: 404 RVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGV 463
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKAR--FG 549
+SEFPL P+++K L+ S +++C +E+L+++AML+ F RP +A+EA R
Sbjct: 464 ILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRP---PLSAEEAALRRALE 520
Query: 550 HIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSN 609
H DGDH +L+ VY A+ Q+ D +WC +N AL A +R +L+ +M R L L
Sbjct: 521 HTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLP 580
Query: 610 DFNSRDYYVNIRKAMLAGYFMQVAH-LERTGQYLTVKDNQVVHLHPSNCLDHK------P 662
F S +++KA+++GYF++VA + TG YL + V L C + P
Sbjct: 581 AFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPP 640
Query: 663 EWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPHYYDLSNFPQCEAKRVLERL 714
WV+Y+ + ++ N + V++++ + L+++AP Y+ LSN P E++ +L +L
Sbjct: 641 PWVLYHNFTISKDNCLSIVSEIQPQMLVELAPPYF-LSNLPPSESRDLLNQL 691
>sp|Q3ZBE0|DQX1_BOVIN ATP-dependent RNA helicase DQX1 OS=Bos taurus GN=DQX1 PE=2 SV=1
Length = 719
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 251/691 (36%), Positives = 411/691 (59%), Gaps = 31/691 (4%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQ--VIILVGETGSGKTTQIPQ 100
+N ++G P+S RYY++LE+R+SLPVW + FL+ L+++ V+++ GE G GK+TQIPQ
Sbjct: 23 VNPFDGLPFSSRYYKLLEQRRSLPVWAARFIFLEHLESSPSGVVLVSGEPGCGKSTQIPQ 82
Query: 101 FVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSA 160
+ E V +K + TQP +AA+S++ RVA+EMD+T+G EVGYSI EDC+
Sbjct: 83 WCAEFVLARG---FQKGWVTVTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGP 139
Query: 161 RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEV-LKNRP-DLK 218
T+L++ D +LL+E + V++LDEA ER++A+D+L GLL++ L + P DL+
Sbjct: 140 DTLLRFCWDRLLLQEVASTRGTGARGVLILDEAQERSVASDLLQGLLRDARLGSLPGDLR 199
Query: 219 LVVMSATLEAEKFQGYFYGAPLMKVPGRLH--PVEIFYTQEPERDYLEAAIRTVVQIHMC 276
+VV++ K Q ++ G P + VP + P ++ P D ++AA + V++
Sbjct: 200 VVVVTDPSLEPKLQDFWGGPPTVCVPRKTGSCPTPVYRDSLPA-DRVDAACQAVLEWCQE 258
Query: 277 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPP 336
E GD+LV+L EEEI C +++++ ++ +Q P +V+PL+ A+Q ++E
Sbjct: 259 EAPGDVLVYLPSEEEISLCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQ-AVYE---- 313
Query: 337 PSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
E G RK+VV+ +A+ S ++ I +VID G + VY+P++R ES ++ P+SK
Sbjct: 314 -DTESG--ARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQ 370
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A R RA PG C LY + + P + NL++ +L LK+ I +
Sbjct: 371 AEARRLRAAGIPPGSCLCLYPKSFLELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGKC 430
Query: 457 DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
F+D PAPE LM+ALE L+YL ALDDDG+L+++G +SEFPL P+++K L+ S +++C +
Sbjct: 431 HFLDRPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVD 490
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKAR--FGHIDGDHLTLLNVYHAYKQNNEDPSW 574
E+L+++AML+ F RP A+EA R H+DGDH +L+ VY A+ Q+ D +W
Sbjct: 491 EMLTLAAMLTAAPGFTRP---PVCAEEAALRRALEHVDGDHSSLIQVYEAFIQSGADKAW 547
Query: 575 CYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAH 634
C +N AL A +R +L+ +M R L L F S +++KA+++GYF++VA
Sbjct: 548 CQARGLNWAALCQARKLRGELLELMQRIELPLSQPAFGSERNRRDLQKALVSGYFLKVAR 607
Query: 635 -LERTGQYLTVKDNQVVHLHPSNCLDHK------PEWVIYNEYVLTSRNFIRTVTDVRGE 687
+ TG YL + V L P+ C + P WV+Y+ + ++ N + V++++ +
Sbjct: 608 DTDGTGNYLLLTHKHVAQLSPNCCYRSRRAPARPPLWVLYHSFSISKDNCLSIVSEIQPQ 667
Query: 688 WLIDIAPHYYDLSNFPQCEAKRVLERLYRKR 718
L+++AP Y+ LSN P E++ L +L +R
Sbjct: 668 MLVELAPPYF-LSNLPPSESRDFLNQLREER 697
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/651 (36%), Positives = 378/651 (58%), Gaps = 47/651 (7%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+LPV Q+K++ L+ ++ +QV+I+ GETGSGKTTQ+P+ +E R K +I TQ
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME------LGRGIKGLIGHTQ 129
Query: 124 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
PRR+AA +V+ R+AEE+ G +GY +RF D S T++K +TDG+LL E D LL
Sbjct: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKV 243
+Y I++DEAHER+L D L G LKE+L RPDLK+++ SAT++ E+F +F AP+++V
Sbjct: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249
Query: 244 PGRLHPVEIFY------TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
GR +PVE+ Y + ERD L+A V ++ E GDIL+F++GE EI D
Sbjct: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTAD 308
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ K N+ +++PLY+ L + Q ++F+ GR+IV++TN+AET
Sbjct: 309 ALNK--LNLRH----TEILPLYARLSNSEQNRVFQ---------SHSGRRIVLATNVAET 353
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+QR GR GR G C RLY+
Sbjct: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413
Query: 418 EKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
E F + +P+ T PEILR+NLA+ +L + LG+ D+ F F++ P + + +L
Sbjct: 414 EDDFLS--RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471
Query: 477 LGALDDDGN-----LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCF 531
LGA+ D LT +G ++S+ P+DP++++M++E+ K+ C E + I++ LS+ +
Sbjct: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531
Query: 532 VRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS------WCYDNFVNHRAL 585
RP + Q+A+DE RF + D L +N+++ + + S C +++N+ +
Sbjct: 532 ERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591
Query: 586 KSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNIRKAMLAGYFMQVAHLERTGQYLTVK 645
+ ++ QL +++ + + S R+ ++ A+L G + + Q T
Sbjct: 592 REWQDIYTQLRQVVKELGIPVNSEPAEYREIHI----ALLTGLLSHIGMKDADKQEYTGA 647
Query: 646 DNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPH 695
N + P + L K P+WV+ E V TSR + R + EW+ +A H
Sbjct: 648 RNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/654 (36%), Positives = 377/654 (57%), Gaps = 51/654 (7%)
Query: 63 KSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLE-GVDIETPDRRRKMMIAC 121
+SLPV Q+K E +++ +QVI++ GETGSGKTTQ+P+ LE G MI
Sbjct: 81 ESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFG-------NLGMIGH 133
Query: 122 TQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
TQPRR+AA SV+ R+AEE++ +G VGY +RF D S T +K +TDG+LL E D
Sbjct: 134 TQPRRIAARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRF 193
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVL-KNRPDLKLVVMSATLEAEKFQGYFYGAPL 240
L +Y +++DEAHER+L D + G LK++L + R DLKL++ SAT++ E+F +F AP+
Sbjct: 194 LNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPI 253
Query: 241 MKVPGRLHPVEIFY---TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
++V GR +PVE+ Y +E ++D L+ + V ++ E GDIL+F+ GE EI D
Sbjct: 254 IEVSGRTYPVEVRYRPVVEEDDQDQLQGILNAVDELQ-AEGRGDILIFMNGEREIRDTAE 312
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ K+ + +++PL++ L Q KIF P+ +IV++TN+AET
Sbjct: 313 ALQKQ------NLKHTEILPLFARLSAQEQNKIFHPSGL---------NRIVLATNVAET 357
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+ I YVIDPG A+ Y+ R +V+ L + PIS+ASA+QR GR GR G C RLY+
Sbjct: 358 SLTVPSIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 417
Query: 418 EKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
E+ FN+ +P+ T PEILR+NLA+ +L + LG+DD+ F F+D P + +++L
Sbjct: 418 EEDFNS--RPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEE 475
Query: 477 LGALD-------DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPN 529
LGA + + LT +G ++++ P+DP+++KM++ + + C E++ I + LS+ +
Sbjct: 476 LGAFETVQTKSGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQD 535
Query: 530 CFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS------WCYDNFVNHR 583
RP+E Q+A+DE RF D L LN++ ++ ++ S C +F+N+
Sbjct: 536 PRERPQEKQQASDEKHRRFADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQCQKDFLNYL 595
Query: 584 ALKSADNVRQQLVRIMARFNLKLCSNDFNS-RDYYVNIRKAMLAGYFMQVAHLE-RTGQY 641
++ ++ Q+ R ++ S NS + Y I A+L+G + E QY
Sbjct: 596 RIREWQDIYHQI-----RLTVREMSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQY 650
Query: 642 LTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLIDIAPH 695
L ++ S +P+WV+ E V TS+ + R V ++ EW+ +A H
Sbjct: 651 LGARNAHFAIFPNSVLFKKQPKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEH 704
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAPB1A10.06c PE=3
SV=1
Length = 1183
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 245/746 (32%), Positives = 395/746 (52%), Gaps = 111/746 (14%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
EI E R +LP+ +++ ++ + AN V+I+ G TGSGKTTQ+PQF+ E +P+
Sbjct: 390 EIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEA-GFSSPESENP 448
Query: 117 MMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
MIA TQPRRVAA+S+++RV+EE+ +V Y IRF+ + T +K++TDG+LLRE
Sbjct: 449 GMIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLREL 507
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD----------LKLVVMSATL 226
+D LL Y +++DEAHER++ TD+L GLL +++ R + LKL++MSATL
Sbjct: 508 SSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATL 567
Query: 227 EAEKFQG----YFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
F + P++K+ R +PV I + + + DYL+ A V IH P+G I
Sbjct: 568 RVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSI 627
Query: 283 LVFLTGEEEIEDACRKITKEI--------------------------------------- 303
LVFLTG++E+E C+ + K
Sbjct: 628 LVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPT 687
Query: 304 -----TNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETS 358
D+ P+ V+PLYS L Q K+F+ +P EG R +V+TN+AETS
Sbjct: 688 SSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSP----EG---HRMCIVATNVAETS 740
Query: 359 LTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTE 418
+TI I YV+D G AK++VYN + V+ V ISKA+A QR+GRAGRT PG C+RLY+
Sbjct: 741 ITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSS 800
Query: 419 KSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLG 478
F++ + PEILR+ + + VL +K + ID++ +F F P L ++L++L+ LG
Sbjct: 801 AVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLG 860
Query: 479 ALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFV------ 532
A+D +G LT++GE+MS FPL P+ SKML+ ++ C ++++ + LS+ FV
Sbjct: 861 AIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLL 920
Query: 533 --------RPREAQKAADE-----------------AKARFGHIDGD--HLTLLNVYHAY 565
R E D+ A +RF ID D L+LL+ AY
Sbjct: 921 YDAHDKNSRSEETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAY 980
Query: 566 KQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFN------SRDYYVN 619
++ +C +N++ +AL+ N+R+Q++ ++ R+ +++ F +
Sbjct: 981 DYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQLKPPTSVQIKA 1040
Query: 620 IRKAMLAGYFMQVAHLERTGQ-YLTV--KDNQVVHLHPSNCLDHKPEWVIYNEY--VLTS 674
+R+ + + Y QVA ++ + Y+T+ ++VV P + E+V+Y +
Sbjct: 1041 LRQFIASAYIDQVALYDKEKRGYVTLFPSGSEVVQFVPDRTYNIDSEYVVYLSLHESRSG 1100
Query: 675 RNFIRTVTDVRGEWLIDIAPHYYDLS 700
R ++ +T++ E L +A + LS
Sbjct: 1101 RVYMSPLTEISPEHLARLAKNTTLLS 1126
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 361 bits (927), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 219/606 (36%), Positives = 329/606 (54%), Gaps = 41/606 (6%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
R ++ +R +LP+ Q LQ LK +QV+++ G+TG GK+TQ+PQ++L
Sbjct: 151 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAA-------- 202
Query: 114 RRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLL 173
+ACTQPRR+A +S+++RV E G +VGY IRFE SA T + +LT G+LL
Sbjct: 203 -GFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLL 261
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 233
R+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT+ F
Sbjct: 262 RQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSS 321
Query: 234 YFYGAPLMKVPGRLHPVEIFYT-QEPE-----------RDYLEAAIRTVVQIHMCEPSGD 281
YF AP+++VPGRL P+ + Y QE E R +L + ++ + E GD
Sbjct: 322 YFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLR-VLESIDHKYPPEERGD 380
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEG 341
+LVFL+G EI ++ V V+PL+S L A Q K+F+ APP
Sbjct: 381 LLVFLSGMAEISAVLEAAQTYASHTQRWV----VLPLHSALSVADQDKVFDVAPPGV--- 433
Query: 342 GPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+ASA QR
Sbjct: 434 ----RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRK 489
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT PG CFRLY E ++ P PEI R L + VL +K + + D F F++P
Sbjct: 490 GRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEP 548
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
P P +L A+ L GALD LT +G +++ P+D + KML+ ++ +L+I
Sbjct: 549 PPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTI 608
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS-----WCY 576
+A LSV + F R ++ A+ GD TL NV++A+ Q + S WC
Sbjct: 609 AAALSVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCR 668
Query: 577 DNFVNHRALKSADNVRQQLVRIMARFNLKLCSNDFNSRDYYVNI--RKAMLAGYFMQVAH 634
+ L N+R+Q ++ L + D Y + R+ A + ++ H
Sbjct: 669 RRGIEEHRLYEMANLRRQFKELLEDHGLLAGAQAAQVGDSYSRLQQRRERRALHQLKRQH 728
Query: 635 LERTGQ 640
E G+
Sbjct: 729 EEGAGR 734
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 273,623,870
Number of Sequences: 539616
Number of extensions: 11736889
Number of successful extensions: 43441
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 42557
Number of HSP's gapped (non-prelim): 374
length of query: 727
length of database: 191,569,459
effective HSP length: 125
effective length of query: 602
effective length of database: 124,117,459
effective search space: 74718710318
effective search space used: 74718710318
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)