Query 004855
Match_columns 727
No_of_seqs 180 out of 618
Neff 4.6
Searched_HMMs 46136
Date Thu Mar 28 14:03:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004855.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004855hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1172 Na+-independent Cl/HCO 100.0 6E-162 1E-166 1373.7 40.2 518 3-628 331-865 (876)
2 TIGR00834 ae anion exchange pr 100.0 2E-152 5E-157 1321.4 39.6 510 2-622 339-882 (900)
3 PF00955 HCO3_cotransp: HCO3- 100.0 3E-136 6E-141 1136.9 0.4 457 1-568 2-510 (510)
4 COG0659 SUL1 Sulfate permease 99.8 2.3E-17 4.9E-22 188.0 24.8 326 44-525 31-365 (554)
5 TIGR00815 sulP high affinity s 99.6 4.8E-14 1E-18 161.0 26.4 331 47-525 27-375 (563)
6 PRK11660 putative transporter; 99.6 2.2E-14 4.7E-19 163.9 22.3 329 47-523 42-394 (568)
7 KOG0236 Sulfate/bicarbonate/ox 99.0 6.6E-08 1.4E-12 113.3 24.5 276 49-358 95-387 (665)
8 PF00916 Sulfate_transp: Sulfa 99.0 2.4E-09 5.3E-14 111.0 10.5 249 140-531 2-269 (280)
9 TIGR03173 pbuX xanthine permea 98.8 4.5E-07 9.8E-12 100.1 21.2 267 40-356 5-279 (406)
10 TIGR00801 ncs2 uracil-xanthine 98.7 2.6E-06 5.6E-11 94.8 23.3 270 40-356 15-295 (415)
11 PRK11412 putative uracil/xanth 98.2 0.00037 8.1E-09 78.5 24.4 272 40-354 18-299 (433)
12 TIGR03616 RutG pyrimidine util 98.1 0.00033 7.2E-09 78.7 22.6 295 1-354 1-304 (429)
13 PRK10720 uracil transporter; P 97.9 0.0019 4.1E-08 72.7 23.4 254 40-355 24-285 (428)
14 PF00860 Xan_ur_permease: Perm 97.7 0.0011 2.3E-08 73.3 17.5 265 41-354 12-291 (389)
15 COG2233 UraA Xanthine/uracil p 97.2 0.019 4.2E-07 65.2 18.3 269 40-354 26-304 (451)
16 PF13792 Sulfate_tra_GLY: Sulf 86.1 0.46 9.9E-06 42.6 1.9 50 47-102 29-79 (84)
17 KOG1292 Xanthine/uracil transp 85.8 37 0.00081 39.7 17.1 53 477-529 343-401 (510)
18 COG2252 Xanthine/uracil/vitami 84.6 86 0.0019 36.4 19.9 76 69-154 56-134 (436)
19 TIGR00843 benE benzoate transp 72.5 1.4E+02 0.003 34.2 16.2 93 68-174 60-153 (395)
20 PF03594 BenE: Benzoate membra 48.1 4.7E+02 0.01 30.0 14.6 210 71-354 47-262 (378)
21 TIGR00843 benE benzoate transp 41.6 66 0.0014 36.7 6.9 101 66-180 254-354 (395)
22 KOG1281 Na+/dicarboxylate, Na+ 38.3 5.1E+02 0.011 31.4 13.4 54 72-128 232-285 (586)
23 PF03594 BenE: Benzoate membra 30.5 85 0.0019 35.7 5.4 90 65-168 237-326 (378)
24 TIGR00815 sulP high affinity s 28.9 2.2E+02 0.0049 33.5 8.8 92 43-153 268-359 (563)
25 PF10337 DUF2422: Protein of u 23.5 2.2E+02 0.0048 32.7 7.3 15 123-137 19-33 (459)
26 PRK11383 hypothetical protein; 22.3 3.9E+02 0.0085 26.8 7.6 78 124-217 14-95 (145)
27 KOG3817 Uncharacterized conser 20.0 75 0.0016 36.1 2.5 66 560-628 253-329 (452)
No 1
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-162 Score=1373.74 Aligned_cols=518 Identities=42% Similarity=0.751 Sum_probs=484.7
Q ss_pred CCCCCccchHhhhhhccccccccccccccccceeechhHHHHHhhhhhHHHHhhccchhccCcchhHHHHHhhhhhhHHH
Q 004855 3 ETFVPFRGIKNDLRGRLMCYKQDWTSGFKAGFRILAPTTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGIIH 82 (727)
Q Consensus 3 ~t~~pF~Gi~~DikrR~p~Y~SDwtDg~~~~~~vlast~fifFA~llPaIaFG~ll~~~T~g~lgv~E~LlStai~Giif 82 (727)
+++++|+|+++|+|||+|||+|||+||+| .||+|+++||||||++|+||||++|+++|+|.+||+|+|+|||+||++|
T Consensus 331 ~tgrlFgGl~~DikrR~p~Y~SD~~Da~~--~~~la~~lfiYfa~l~P~ItFG~ll~~~Tdg~~~v~E~L~stal~Giif 408 (876)
T KOG1172|consen 331 RTGRLFGGLVLDIKRRLPHYKSDFRDAFN--IQCLAATLFIYFACLLPAITFGGLLGEATDGLIGVVETLLSTALCGIIF 408 (876)
T ss_pred cccccchhHHHHHHhhcCCChHHHHHHhc--cccchHHHHHHHHhhhhHhhHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999 6899999999999999999999999999999999999999999999999
Q ss_pred HhhcCcceeeeccCchHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHHHHhcccccceecccchhhHHHHH
Q 004855 83 SIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWVCVWTALLLLMLSILGACSIINRFTRVAGELFGLL 162 (727)
Q Consensus 83 slfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WVgiWta~~l~llai~nas~li~~~TRft~EiFg~L 162 (727)
|+||||||+|+|+|||++|||+++|+||++++. +||+|++|||+|++++|+++|++|+|.+|+|+||||||+||+|
T Consensus 409 slfggQPLlIlg~TgP~lVfe~~lf~f~~~~~~----dyl~~r~wVglW~~~l~illaa~~as~lv~~~TRfteEiF~~L 484 (876)
T KOG1172|consen 409 SLFGGQPLLILGVTGPLLVFEKALFKFCKDNGL----DYLAFRAWVGLWTAFLLILLAATNASSLVKYITRFTEEIFGLL 484 (876)
T ss_pred HHhcCCceEEEecCccHHHHHHHHHHHHhhCCC----chhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999999999999984 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCC-----------------CCCCccccccccccchhHHHHHHHHHHHHHHHHhhccccccc
Q 004855 163 IAMLFMQQAIKGLVEEFRIPE-----------------RENPKLVQFIPSWRFANGMFALVLSFGLLYTGLKSRKARSWR 225 (727)
Q Consensus 163 IsvIFI~eaik~lv~~F~~p~-----------------~~~~~~~~~~~~~~~~~~llsliL~~gt~~~a~~lr~~r~s~ 225 (727)
||+|||||||+++++.|+... .++.....++..|+++++++|+++++||+++|+++|+||+|+
T Consensus 485 Is~iFi~eai~kl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s~ 564 (876)
T KOG1172|consen 485 ISLIFIYEAIKKLIKIFKGLPIEFDSKPNPGADWSGPECESVSGTLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSSR 564 (876)
T ss_pred HHHHHHHHHHHHHHHHhhcCcccccccCCcccccccccccccCcccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999887422 222334456778899999999999999999999999999999
Q ss_pred ccccccchhhcchhhhHHHHHHhhhccccCcccCCCCccccCCCCCCCCCCCCCceEeccCCCchHHHHHHHHHHHHHHH
Q 004855 226 YGTGWLRSVIADYGVPLMVVVWTGVSYIPSGDVPKGIPRRLFSPNPWSPGAYENWTVIKDMLNVPIVYIIGAFIPATMIA 305 (727)
Q Consensus 226 y~~~~vR~~IaDygvpiaVlv~t~vsy~~~~~vP~g~~~rl~~p~p~~p~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~ 305 (727)
||++|+|++|+|||+|+||++|++++|+++...+.+++.+...|.+|.+. |+|+|+ +++++|+|++++|++||++++
T Consensus 565 yf~~~~R~~isDfgvpisIl~~s~i~~~~~~~~~~kl~vp~~~~~t~~~~--rgw~v~-~~~~~P~~~~~~A~ipalll~ 641 (876)
T KOG1172|consen 565 YFPRKVRSLISDFGVPLSILVFSLIDYFGGSVETPKLPVPSVFPPTWPFD--RGWFVP-PFGKNPWWYVFAALIPALLLT 641 (876)
T ss_pred ccchHHHHHHHhhhhHHHHHHHHHHHhhccccCCCccccCcCCCCCCccc--CCeeeC-CCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999754455666667777777443 999985 445999999999999999999
Q ss_pred HHHHHhhhhHHHHhhcccccCCCCCCccchhHHHHHHhhhhhhcCCCCCCCCCCCCchhhhhhHHHHHHhhhhhhhhhhh
Q 004855 306 VLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVATAR 385 (727)
Q Consensus 306 iL~F~DhnIss~iaq~ke~kLkKpsgyH~DLlllGi~t~icgllGLP~~nGaipqSp~Ht~SLav~~~~~~~~~~v~~a~ 385 (727)
||||||||||++||||||||||||+||||||+++|++|++||+|||||+|||+||||||++||+++++
T Consensus 642 iLiFmDqqIts~iv~rke~kLKKgsgyH~DLlllgil~~icsllGLPw~~~a~p~S~~H~~SL~v~~~------------ 709 (876)
T KOG1172|consen 642 ILIFMDQQITAVIVNRKENKLKKGSGYHLDLLLLGILTLICSLLGLPWSNAATVQSPMHTKSLAVESE------------ 709 (876)
T ss_pred HHHHhcchHHHHHhhcccccCCCCcchhHHHHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHhhc------------
Confidence 99999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred hhccccccccccchhhHHHHhhhcchhhhhhhhhhccccccccccccchhhhhhhhhhhhhhhhhccCCCCCCCCccccc
Q 004855 386 TSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGQQKHKYAGYTIGIITIGLKELKESTIQAASCTGNLNAPVDETLF 465 (727)
Q Consensus 386 ~~~~~~~s~~~~y~~~~~~~~~~~~~~~~~~~sa~g~~~~~~~~~~~~~~~~~~~~lk~~~~~~~~~~G~~~ap~~~~~f 465 (727)
.+| |++++
T Consensus 710 -------------------------------~~a---------------------------------------pge~~-- 717 (876)
T KOG1172|consen 710 -------------------------------TSA---------------------------------------PGEQP-- 717 (876)
T ss_pred -------------------------------ccC---------------------------------------CCCcc--
Confidence 123 33332
Q ss_pred chhhcccccCcceeeeechhhHHHHHHHHHHHhhccccCccchhhhhhHHHhhhcccCCCchHHHHHHHhhcCCCCcccc
Q 004855 466 DIEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPFLKMIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKV 545 (727)
Q Consensus 466 d~e~~i~~~l~v~V~EQRvS~ll~~lLig~sv~~~PvL~~IP~sVL~GvFlYMGi~SL~GnQf~eRilLLf~~p~~~y~~ 545 (727)
.+++|+||||||++|++|||++++++|+|+.||+|||||||+|||++||+|||||||++|+|||+|||
T Consensus 718 ---------~i~~V~EQRvtgll~~llvgls~~~~pvL~~IP~~VL~GvFlYMgv~SL~Gnqf~eRl~Llf~p~k~~--- 785 (876)
T KOG1172|consen 718 ---------QIVGVREQRVTGLLQFLLVGLSVLLLPVLKLIPMPVLYGVFLYMGVSSLPGNQFFERLLLLFMPPKHR--- 785 (876)
T ss_pred ---------ccccchhhhhHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHhhccCCccHHHHHHHHHcCCcccC---
Confidence 35899999999999999999999999999999999999999999999999999999999999999975
Q ss_pred ccccccccccccCccchhhHHHHHHHHHHhhheeeechhhHhhHHHHHHHHHHHhhhhcCCCCChhhhcccCcccccccC
Q 004855 546 LEEYHATFVETVPFKTIAMFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLLVPARQYILPKFFKGVHLQDLDAAEYEEAP 625 (727)
Q Consensus 546 l~~~~~~yvr~Vp~~~IhlFT~iQl~~l~~~f~vt~~~~aai~FPl~i~lLIpiR~~lLPk~F~~~eL~~LD~~e~ee~~ 625 (727)
|+.+|+||||+|+||+||++|+.||++||+|+|++.|+|+||++++++||+|+++|||+|+++||++||++|+|+++
T Consensus 786 ---p~~~ylrhv~~r~vhlFT~~Ql~~l~ll~~i~~~~~asi~FP~~ll~lVpiR~~~lp~~f~~~eL~~LD~~~~~~~~ 862 (876)
T KOG1172|consen 786 ---PDTLYLRHVPFRRVHLFTLIQLLCLALLWAIKWSPVASIIFPLMLLLLVPIRQYLLPRLFKPRELQALDANEYEPEP 862 (876)
T ss_pred ---CCccceeecchhhHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHhHHhhcCHHhhhhhchhhccccc
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 004855 626 ALP 628 (727)
Q Consensus 626 ~~~ 628 (727)
..+
T Consensus 863 ~~~ 865 (876)
T KOG1172|consen 863 DKP 865 (876)
T ss_pred ccc
Confidence 887
No 2
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=100.00 E-value=2.2e-152 Score=1321.37 Aligned_cols=510 Identities=27% Similarity=0.512 Sum_probs=466.0
Q ss_pred CCCCCCccchHhhhhhccccccccccccccccceeechhHHHHHhhhhhHHHHhhccchhccCcchhHHHHHhhhhhhHH
Q 004855 2 EETFVPFRGIKNDLRGRLMCYKQDWTSGFKAGFRILAPTTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGII 81 (727)
Q Consensus 2 ~~t~~pF~Gi~~DikrR~p~Y~SDwtDg~~~~~~vlast~fifFA~llPaIaFG~ll~~~T~g~lgv~E~LlStai~Gii 81 (727)
+++++|||||++|+|||+|||+|||||||| +||+|+++||||||++||||||++|+++|+|.+||+|+|+|||+||++
T Consensus 339 ~rtg~~f~Gli~DikRR~p~Y~SD~tDa~~--~q~laa~ifiyFA~L~PaIaFG~ll~~~T~g~~gv~E~Llstai~Gii 416 (900)
T TIGR00834 339 QRTGRPFGGLIRDIKRRYPHYLSDFTDALN--PQCLAAVIFIYFAALSPAITFGGLLGEKTRNMMGVSELLISTAVQGVL 416 (900)
T ss_pred hhcCCccchHHHHHHhhcccchHHHhhhhc--chhHHHHHHHHHHHhhHHhhHHHHHHHhhCCcchHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999 699999999999999999999999999999999999999999999999
Q ss_pred HHhhcCcceeeeccCchHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHHHHhcccccceecccchhhHHHH
Q 004855 82 HSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWVCVWTALLLLMLSILGACSIINRFTRVAGELFGL 161 (727)
Q Consensus 82 fslfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WVgiWta~~l~llai~nas~li~~~TRft~EiFg~ 161 (727)
||+||||||+|+|+|||+++|++++|+||++++ .+|++|++|||+|+++||+++|++|+|++|+|+||||||+|++
T Consensus 417 fslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~----~~yl~~~~WigiW~~~~~~lla~~~~s~lvryiTRFTeEiFa~ 492 (900)
T TIGR00834 417 FALLAAQPLLVVGFSGPLLVFEEAFFSFCESNG----LEYLVGRVWIGLWLVLLVLLLVATEGSFLVRYISRFTQEIFSF 492 (900)
T ss_pred HhhhcCCceEEecCcccHHHHHHHHHHHHhhcC----CchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999999999999987 3899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCC--------------CCCc---------------cccccccccchhHHHHHHHHHHHH
Q 004855 162 LIAMLFMQQAIKGLVEEFRIPER--------------ENPK---------------LVQFIPSWRFANGMFALVLSFGLL 212 (727)
Q Consensus 162 LIsvIFI~eaik~lv~~F~~p~~--------------~~~~---------------~~~~~~~~~~~~~llsliL~~gt~ 212 (727)
|||+||||||+++++++|+.... .|.+ ....++.|.++++++|++|++||+
T Consensus 493 lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~llsliL~lgTf 572 (900)
T TIGR00834 493 LISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLGGNNCRFQPNTALLSLVLMLGTF 572 (900)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHH
Confidence 99999999999999999985210 0110 011223456789999999999999
Q ss_pred HHHHhhcccccccccccccchhhcchhhhHHHHHHhhhccccCcccCCCCccccCCCCCCCCCCC--CCceEeccCCCc-
Q 004855 213 YTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSGDVPKGIPRRLFSPNPWSPGAY--ENWTVIKDMLNV- 289 (727)
Q Consensus 213 ~~a~~lr~~r~s~y~~~~vR~~IaDygvpiaVlv~t~vsy~~~~~vP~g~~~rl~~p~p~~p~~~--r~W~V~~~~~~v- 289 (727)
++|++++++|+|+||++++|++|+|||+||+|++|++++|.++ ++. .+++..|..+.|++. |+|+| .+++..
T Consensus 573 ~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~-~v~---~~kl~Vp~~f~pt~p~~R~W~i-~p~~~~~ 647 (900)
T TIGR00834 573 FLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIG-DTY---TQKLSVPSGLKVTNPSARGWFI-PPLGENR 647 (900)
T ss_pred HHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhc-cCc---ccccCCCCCcCCCCCCCCCeEE-ccccccc
Confidence 9999999999999999999999999999999999999999764 232 134666777777765 89996 455544
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcccccCCCCCCccchhHHHHHHhhhhhhcCCCCCCCCCCCCchhhhh
Q 004855 290 --PIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKS 367 (727)
Q Consensus 290 --p~~~i~~A~iPA~ll~iL~F~DhnIss~iaq~ke~kLkKpsgyH~DLlllGi~t~icgllGLP~~nGaipqSp~Ht~S 367 (727)
|+|++++|++||++++||||||||||++|+|+||||||||+||||||+++|++|++||+|||||+||++||||+|++|
T Consensus 648 ~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~e~kLkKgsgyH~Dllllg~~~~v~sllGLPw~~aatv~S~~Hv~s 727 (900)
T TIGR00834 648 PFPWWMMFAAALPALLVFILIFMEQQITTLIVSKKERKLKKGSGFHLDLLLVVGMGGVAALFGLPWLSAATVRSVTHANA 727 (900)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCccccCCCCcccchHHHHHHHHHHHHHhcCCCcccccCCcChhhHhH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhccccccccccccchhhhhhhhhhhhhh
Q 004855 368 LATLKHQLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGQQKHKYAGYTIGIITIGLKELKESTI 447 (727)
Q Consensus 368 Lav~~~~~~~~~~v~~a~~~~~~~~s~~~~y~~~~~~~~~~~~~~~~~~~sa~g~~~~~~~~~~~~~~~~~~~~lk~~~~ 447 (727)
|+++++. +
T Consensus 728 L~v~~~~-------------------------------------------~----------------------------- 735 (900)
T TIGR00834 728 LTVMSKA-------------------------------------------S----------------------------- 735 (900)
T ss_pred Heeeeec-------------------------------------------c-----------------------------
Confidence 9875431 1
Q ss_pred hhhccCCCCCCCCcccccchhhcccccCcceeeeechhhHHHHHHHHHHHhhccccCccchhhhhhHHHhhhcccCCCch
Q 004855 448 QAASCTGNLNAPVDETLFDIEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPFLKMIPTSVLWGYFAFMAIESLPGNQ 527 (727)
Q Consensus 448 ~~~~~~G~~~ap~~~~~fd~e~~i~~~l~v~V~EQRvS~ll~~lLig~sv~~~PvL~~IP~sVL~GvFlYMGi~SL~GnQ 527 (727)
+||++++ +++|+||||||++||+|||+|+++.|+|++||+|||||+|+|||++||+|||
T Consensus 736 ----------~~Ge~~~-----------i~~V~EQRvT~ll~~lLiglsv~~~PvL~~IP~aVL~GvFlYMGv~SL~GnQ 794 (900)
T TIGR00834 736 ----------APGEKAQ-----------IQEVREQRVTGLLVAVLVGLSILMEPILKRIPLAVLFGIFLYMGVTSLSGIQ 794 (900)
T ss_pred ----------CCCCCCc-----------cceeEeeehHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhcccCH
Confidence 2333321 3799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCccccccccccccccccCccchhhHHHHHHHHHHhhheeeechhhHhhHHHHHHHHHHHhhhhcCCC
Q 004855 528 FWERILLLFTAPSRRYKVLEEYHATFVETVPFKTIAMFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLLVPARQYILPKF 607 (727)
Q Consensus 528 f~eRilLLf~~p~~~y~~l~~~~~~yvr~Vp~~~IhlFT~iQl~~l~~~f~vt~~~~aai~FPl~i~lLIpiR~~lLPk~ 607 (727)
||+|++|+|||+|++ |+.+|+|+||+||||+||++|++|++++|+|+| ++++|+||++|++|||+|++++||+
T Consensus 795 ~~~Ri~llf~p~k~~------P~~~ylr~Vp~~kihlFT~iQl~cl~~l~~ik~-t~aai~FP~~iillVpiR~~llp~~ 867 (900)
T TIGR00834 795 LFDRLLLLLMPPKYH------PDVPYVRRVKTWRMHLFTAIQILCLALLWVVKS-TPASLAFPFVLILTVPLRRLLLPRL 867 (900)
T ss_pred HHHHHHHHhcCcccC------CCchhhhcCChhHHHHHHHHHHHHHHHHHHHHH-HhHHHHhHHHHHHHHHHHHHHHhhc
Confidence 999999999999864 677999999999999999999999999999998 5799999999999999999999999
Q ss_pred CChhhhcccCccccc
Q 004855 608 FKGVHLQDLDAAEYE 622 (727)
Q Consensus 608 F~~~eL~~LD~~e~e 622 (727)
|+++||++||++|.|
T Consensus 868 F~~~eL~~LD~~d~~ 882 (900)
T TIGR00834 868 FTERELKCLDKEDAK 882 (900)
T ss_pred CCHHHHhhhCccccc
Confidence 999999999988765
No 3
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=100.00 E-value=3e-136 Score=1136.95 Aligned_cols=457 Identities=36% Similarity=0.687 Sum_probs=67.3
Q ss_pred CCCCCCCccchHhhhhhccccccccccccccccceeechhHHHHHhhhhhHHHHhhccchhccCcchhHHHHHhhhhhhH
Q 004855 1 MEETFVPFRGIKNDLRGRLMCYKQDWTSGFKAGFRILAPTTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGI 80 (727)
Q Consensus 1 ~~~t~~pF~Gi~~DikrR~p~Y~SDwtDg~~~~~~vlast~fifFA~llPaIaFG~ll~~~T~g~lgv~E~LlStai~Gi 80 (727)
.+||++|||||++|+|||+|||+|||+||+| .||+++++||||||++||||||++|+++|+|.+|++|+|+|+++||+
T Consensus 2 l~rtg~~fgGl~~Dikrr~p~Y~SD~~D~~~--~~~~~~~~flyfa~l~PaItFG~ll~~~T~~~~gv~e~l~~~~i~Gi 79 (510)
T PF00955_consen 2 LQRTGRLFGGLINDIKRRLPWYWSDFTDGLN--LQCLAATLFLYFACLSPAITFGGLLGEATDGAIGVMEVLLSTAICGI 79 (510)
T ss_dssp -------------------STTCHHHCCSS---SHHHHHHHHHHHHHHHHHHSSS-SS---------HHHHHHHHHHHHH
T ss_pred Ccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3789999999999999999999999999999 69999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCcceeeeccCchHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHHHHhcccccceecccchhhHHH
Q 004855 81 IHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWVCVWTALLLLMLSILGACSIINRFTRVAGELFG 160 (727)
Q Consensus 81 ifslfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WVgiWta~~l~llai~nas~li~~~TRft~EiFg 160 (727)
+||+||||||+|+|+|||+++|++++|+||++++. +|++||+|||+|++++|++++++|+|.+++|+||||||+|+
T Consensus 80 ~f~lf~gQPL~Ilg~TgP~~vf~~~l~~~~~~~~~----~fl~~~~wig~w~~~~~~~~~~~~~s~lv~~~TRfTeEiF~ 155 (510)
T PF00955_consen 80 IFSLFSGQPLTILGSTGPVLVFEKILYKFCKSYGL----DFLPFRAWIGIWTAIFLLVLAAFNASFLVRYITRFTEEIFA 155 (510)
T ss_dssp HHHHCC--------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999873 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCC---------------CCCcc---------------------c---c----------
Q 004855 161 LLIAMLFMQQAIKGLVEEFRIPER---------------ENPKL---------------------V---Q---------- 191 (727)
Q Consensus 161 ~LIsvIFI~eaik~lv~~F~~p~~---------------~~~~~---------------------~---~---------- 191 (727)
+|||+|||+||+|+++++|+...- ++++. + +
T Consensus 156 ~lIs~iFi~ea~~~l~~~~~~~p~~~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~g~~~g~~c 235 (510)
T PF00955_consen 156 LLISIIFIYEAIKKLVKIFKKYPLNSDYVTQYSCQCTPPENSNNSTLNPWTNLNNGSINWSNLSNSECENINGELVGTSC 235 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999874100 00000 0 0
Q ss_pred -ccccccchhHHHHHHHHHHHHHHHHhhcccccccccccccchhhcchhhhHHHHHHhhhccccCcccCCCCccccCCCC
Q 004855 192 -FIPSWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSGDVPKGIPRRLFSPN 270 (727)
Q Consensus 192 -~~~~~~~~~~llsliL~~gt~~~a~~lr~~r~s~y~~~~vR~~IaDygvpiaVlv~t~vsy~~~~~vP~g~~~rl~~p~ 270 (727)
.+..+.++++++|++|++||+++|+.++++|+|+|+++++|++|+|||+||+|++|++++|+.+.++|+ +..|+
T Consensus 236 ~~~~~~~p~taLlSliL~lgTf~la~~L~~fk~S~yf~~~vR~~isDf~v~iaI~~~~~~~~~~~~~~~k-----L~vp~ 310 (510)
T PF00955_consen 236 DDHVQYQPDTALLSLILALGTFWLAYTLRQFKNSPYFPRWVREIISDFGVPIAILIMTLVDYLFGVDTPK-----LNVPS 310 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCcCccHHHHHhHHhhHHHHHHHHHHHHHHHhcccccc-----cCCCC
Confidence 011345667899999999999999999999999999999999999999999999999999887644443 55666
Q ss_pred CCCCCCC--CCceEeccCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcccccCCCCCCccchhHHHHHHhhhhhh
Q 004855 271 PWSPGAY--ENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGL 348 (727)
Q Consensus 271 p~~p~~~--r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~DhnIss~iaq~ke~kLkKpsgyH~DLlllGi~t~icgl 348 (727)
.++|+.. |+|+| .+++++|+|++++|++||+++++|||||||||++|+|+||||||||+||||||+++|++|++||+
T Consensus 311 ~f~pt~~~~r~W~v-~p~~~~p~w~~~aA~~palll~iL~F~DqnIts~ivn~~e~kLkKg~gyH~DL~llgi~~~v~sl 389 (510)
T PF00955_consen 311 SFKPTSPGKRGWFV-NPFGSLPWWAIFAAIIPALLLTILFFMDQNITSLIVNRPENKLKKGSGYHLDLFLLGIITLVCSL 389 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCCeec-CcccCCCHHHHHHHHHHHHHHHHHHHHHHhHhHHHhCChhhccCCCCcccHHHHHHHHHHHHHHH
Confidence 6666654 89996 57889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhcccccccc
Q 004855 349 IGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGQQKHKYA 428 (727)
Q Consensus 349 lGLP~~nGaipqSp~Ht~SLav~~~~~~~~~~v~~a~~~~~~~~s~~~~y~~~~~~~~~~~~~~~~~~~sa~g~~~~~~~ 428 (727)
+||||+||++||||+|++||+++++. .
T Consensus 390 lGLPw~~aa~~~S~~Hv~sL~~~~~~-------------------------------------------~---------- 416 (510)
T PF00955_consen 390 LGLPWMNAATPQSPMHVRSLAVESET-------------------------------------------S---------- 416 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCcccCccCCHHHhCcccEEecc-------------------------------------------c----------
Confidence 99999999999999999999876542 2
Q ss_pred ccccchhhhhhhhhhhhhhhhhccCCCCCCCCcccccchhhcccccCcceeeeechhhHHHHHHHHHHHhhccccCccch
Q 004855 429 GYTIGIITIGLKELKESTIQAASCTGNLNAPVDETLFDIEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPFLKMIPT 508 (727)
Q Consensus 429 ~~~~~~~~~~~~~lk~~~~~~~~~~G~~~ap~~~~~fd~e~~i~~~l~v~V~EQRvS~ll~~lLig~sv~~~PvL~~IP~ 508 (727)
+|||+++ +++|+||||||+++|+|||+|+++.|+|++||+
T Consensus 417 -----------------------------~pGe~~~-----------i~~V~EqRvT~l~~~~Ligls~~l~pvL~~IP~ 456 (510)
T PF00955_consen 417 -----------------------------APGEKPK-----------IVGVREQRVTGLLVHLLIGLSLFLLPVLKLIPM 456 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------cCCCCCe-----------eCeEEEecccHHHHHHHHHHHHHHHHHHHHhhH
Confidence 2333322 269999999999999999999999999999999
Q ss_pred hhhhhHHHhhhcccCCCchHHHHHHHhhcCCCCccccccccccccccccCccchhhHHHH
Q 004855 509 SVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEEYHATFVETVPFKTIAMFTIF 568 (727)
Q Consensus 509 sVL~GvFlYMGi~SL~GnQf~eRilLLf~~p~~~y~~l~~~~~~yvr~Vp~~~IhlFT~i 568 (727)
|||+|+|+|||++||+|||||||++|+|||+|++ |+.+|+|+||+||||+||++
T Consensus 457 ~VL~GvFlymG~~sL~gnq~~~Ri~ll~~~~k~~------P~~~ylr~Vp~~~ihlfT~I 510 (510)
T PF00955_consen 457 PVLYGVFLYMGVTSLSGNQFFERILLLFMPPKHY------PDTHYLRRVPQRKIHLFTLI 510 (510)
T ss_dssp --------------------TTTT------SS---------------TTHHHHHT-----
T ss_pred HHHHHHHHhheeeeecCccHHHHHHHHccCcccc------cCCHHHCcCCCCeEEEEEeC
Confidence 9999999999999999999999999999998863 67799999999999999985
No 4
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=99.78 E-value=2.3e-17 Score=187.96 Aligned_cols=326 Identities=20% Similarity=0.223 Sum_probs=240.8
Q ss_pred HHhhhhh-HHHHhhccchhccCcchhHHHHHhhhhhhHHHHhhcCcceeeeccCchHHHHHHHHHHHHH---hhhccccc
Q 004855 44 FFASAIP-VISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAK---ERADLGRN 119 (727)
Q Consensus 44 fFA~llP-aIaFG~ll~~~T~g~lgv~E~LlStai~GiifslfgGQPL~IlGvTGP~~if~~~ly~f~~---~~~~lg~~ 119 (727)
..+.++| +++|+..-+ .+..-.|.++.++|+++++|||.|..|.|+||++.+ .++.... ++
T Consensus 31 va~valP~ama~a~~aG------v~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~---v~a~~i~~~~~~------ 95 (554)
T COG0659 31 VAAVALPLAMAFAIAAG------VPPEAGLYASIVAGIIYALFGGSRGLISGPTGAFAV---VLAAVIASLVET------ 95 (554)
T ss_pred HHHHHhHHHHHHHHHcC------CCHHHHHHHHHHHHHHHHHHcCCccceeccchhhHH---HHHHHHHHHHHH------
Confidence 3556779 999998433 667779999999999999999999999999999665 4555544 43
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcccccceecccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCccccccccc--c
Q 004855 120 LFIAWSGWVCVWTALLLLMLSILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIPSW--R 197 (727)
Q Consensus 120 ~fL~~~~WVgiWta~~l~llai~nas~li~~~TRft~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~~~~~--~ 197 (727)
++...+-+.+-++++++++..+..+++++|+.|-.=--|-.-|+++.+...+..+.+. +...+....+....+ .
T Consensus 96 -g~~~~~~~tllaGv~~i~~G~lRLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~---~~~~~~~~~~~~~l~~~~ 171 (554)
T COG0659 96 -GLALAFLATLLAGVFQILLGLLRLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGL---ASKVSGFWAKVSALFTVL 171 (554)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCC---CccccchHHHHHHHHHhc
Confidence 4456677999999999999999999999999998888888888888888888776542 111111000000000 0
Q ss_pred chhHHHHHHHHHHHHHHHHhhcccccccccccccchhhcchhhhHHHHHHhhhccccCcccC-CC-CccccCCCCCCCCC
Q 004855 198 FANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSGDVP-KG-IPRRLFSPNPWSPG 275 (727)
Q Consensus 198 ~~~~llsliL~~gt~~~a~~lr~~r~s~y~~~~vR~~IaDygvpiaVlv~t~vsy~~~~~vP-~g-~~~rl~~p~p~~p~ 275 (727)
......++++...++.+-+..++.. +..|+ ..+++++.|.+++.++.+.+ .| ++..+..+.|
T Consensus 172 ~~~~~~~~~lg~~~l~il~~~~~~~--~~~P~----------~liaiv~~t~i~~~~~~~~~~~G~i~~~lp~~~~---- 235 (554)
T COG0659 172 LTINLATLLLGLLTLAILLFLPRLT--PRIPS----------PLIALVLGTLIVWIFPLDSLRYGEIPGSLPSGLP---- 235 (554)
T ss_pred ccccHHHHHHHHHHHHHHHHccchh--hhCCc----------HHHHHHHHHHHHHHhcCCchhcccCcccCCcCCC----
Confidence 1112345556666665555554443 55665 56999999999988876654 23 3333333332
Q ss_pred CCCCceEeccCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcccccCCCCCCccchhHHHHHHhhhhhhcCCCCCC
Q 004855 276 AYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSN 355 (727)
Q Consensus 276 ~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~DhnIss~iaq~ke~kLkKpsgyH~DLlllGi~t~icgllGLP~~n 355 (727)
+| ...+++...+..-+.+|+.++++-+.|+-+|+...+..... +..-+-||..+|+.|+++|++|-=|.+
T Consensus 236 ---~~----~~P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~---~~d~nrELiaqGiaNi~sglfgg~p~~ 305 (554)
T COG0659 236 ---HF----RLPNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT---KHDSNRELIAQGIANIASGLFGGIPAT 305 (554)
T ss_pred ---cc----cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCHHHHHhhHHHHHHHHhCCcccc
Confidence 22 23345555566777789999999999999999998875433 667789999999999999999999999
Q ss_pred CCCCCCchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhccccccccccccchh
Q 004855 356 GVIPQSPMHTKSLATLKHQLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGQQKHKYAGYTIGII 435 (727)
Q Consensus 356 GaipqSp~Ht~SLav~~~~~~~~~~v~~a~~~~~~~~s~~~~y~~~~~~~~~~~~~~~~~~~sa~g~~~~~~~~~~~~~~ 435 (727)
|.+.||.++.+|
T Consensus 306 g~~srS~~nv~s-------------------------------------------------------------------- 317 (554)
T COG0659 306 GSISRSAINIKS-------------------------------------------------------------------- 317 (554)
T ss_pred chhHHHHHHHHh--------------------------------------------------------------------
Confidence 999888777765
Q ss_pred hhhhhhhhhhhhhhhccCCCCCCCCcccccchhhcccccCcceeeeechhhHHHHHHHHHHHh-hccccCccchhhhhhH
Q 004855 436 TIGLKELKESTIQAASCTGNLNAPVDETLFDIEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVA-AMPFLKMIPTSVLWGY 514 (727)
Q Consensus 436 ~~~~~~lk~~~~~~~~~~G~~~ap~~~~~fd~e~~i~~~l~v~V~EQRvS~ll~~lLig~sv~-~~PvL~~IP~sVL~Gv 514 (727)
|. .+|+|++++++++.+.++ +.|++.+||+++|.|+
T Consensus 318 ------------------Ga-------------------------rT~lsgi~~a~~lll~l~~~~~~~~~IP~a~Laav 354 (554)
T COG0659 318 ------------------GA-------------------------RTRLSGIIHAALLLLLLLFLAPLVSYIPLAALAAV 354 (554)
T ss_pred ------------------CC-------------------------cChHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 22 479999999999888765 5689999999999999
Q ss_pred HHhhhcccCCC
Q 004855 515 FAFMAIESLPG 525 (727)
Q Consensus 515 FlYMGi~SL~G 525 (727)
-++.|++-+.=
T Consensus 355 li~v~~~l~~~ 365 (554)
T COG0659 355 LILVGWGLLDW 365 (554)
T ss_pred HHHHHHHhccH
Confidence 99999987664
No 5
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=99.63 E-value=4.8e-14 Score=160.96 Aligned_cols=331 Identities=16% Similarity=0.161 Sum_probs=216.3
Q ss_pred hhhh-HHHHhhccchhccCcchhHHHHHhhhhhhHHHHhhcCcceeeeccCchHHHHHHHHHHHHHhhhcccc--chhhH
Q 004855 47 SAIP-VISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGR--NLFIA 123 (727)
Q Consensus 47 ~llP-aIaFG~ll~~~T~g~lgv~E~LlStai~GiifslfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~--~~fL~ 123 (727)
.++| ++||+..-+ +...-.|.++.+.++++++||+.|.+|.|+|+.+.++ +....++.+..+. .++..
T Consensus 27 ~~iP~~~ayA~lag------lpp~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~---~~~~v~~~~~~~~~~~~~~~ 97 (563)
T TIGR00815 27 LLIPQAMAYAILAG------LSPIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLL---LGSVIARVGLQYLFDCDAIR 97 (563)
T ss_pred HHHHHHHHHHHHcC------CCchhhhHHHHHHHHHhheecCCCcccCCHHHHHHHH---HHHHHHHhcCCCCcccHHHH
Confidence 3556 999987652 3444569999999999999999999999999887664 3444444332111 25788
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccceecccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcccccccccc--chh-
Q 004855 124 WSGWVCVWTALLLLMLSILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIPSWR--FAN- 200 (727)
Q Consensus 124 ~~~WVgiWta~~l~llai~nas~li~~~TRft~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~~~~~~--~~~- 200 (727)
...++++-+++++++++.++.+.+++|+++-.-.-|..-++++.+...++.+...-..+.+.+.- ++....|. ...
T Consensus 98 ~a~~l~~l~Gi~~~~~g~lrlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~~~~~~-~~~~~~~~~l~~~~ 176 (563)
T TIGR00815 98 LAFTLTLLAGIFQVILGLLRLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTL-GVVISTWAGLPNTH 176 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCChH-HHHHHHHHHhhhcc
Confidence 88899999999999999999999999999988889999999999999998887631110111110 00000000 001
Q ss_pred --HHHHHHHHHHHHHHHHhhcccccccccccccchhhcchhhhHHHHHHhhhccccC---------cccCCCCccccCCC
Q 004855 201 --GMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPS---------GDVPKGIPRRLFSP 269 (727)
Q Consensus 201 --~llsliL~~gt~~~a~~lr~~r~s~y~~~~vR~~IaDygvpiaVlv~t~vsy~~~---------~~vP~g~~~rl~~p 269 (727)
...++++++.++.+-+..++.+ +.+++.++.. =-+..+++++.+.++++.. .++|.+.|
T Consensus 177 ~~~~~~~~i~~~~~~~l~~~~~~~--~~~~~~~~~~--~p~~li~vi~~~~~~~~~~~~~~~~~~~g~ip~g~p------ 246 (563)
T TIGR00815 177 NWNWCTLVIGLVLLLFLLYTKKLG--KRNKKLLFAP--AVAPLLVVILATLAVTIGLHKKQGVSILGHIPSGLS------ 246 (563)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhh--hhccchhccc--ccHHHHHHHHHHHHHHHHccCCCCeEEEeecCCCCC------
Confidence 2334444444444333333221 1111110000 0112344555554544331 12333321
Q ss_pred CCCCCCCCCCceEeccCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcccccCCCCCCccchhHHHHHHhhhhhhc
Q 004855 270 NPWSPGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLI 349 (727)
Q Consensus 270 ~p~~p~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~DhnIss~iaq~ke~kLkKpsgyH~DLlllGi~t~icgll 349 (727)
. | +...+.+..+...+..|+.++++-|+|+..++....++.. +....+.||+.+|+.|+++|++
T Consensus 247 ~---------~----~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~---~~~d~n~El~a~G~~N~~~~~f 310 (563)
T TIGR00815 247 F---------F----PPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTG---YKIDANQELVAQGIANIVGSFF 310 (563)
T ss_pred C---------C----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCCcHHHHHhhHHHHHHHHh
Confidence 0 1 0111222334556677999999999999888776655422 4577889999999999999999
Q ss_pred CCCCCCCCCCCCchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhccccccccc
Q 004855 350 GIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGQQKHKYAG 429 (727)
Q Consensus 350 GLP~~nGaipqSp~Ht~SLav~~~~~~~~~~v~~a~~~~~~~~s~~~~y~~~~~~~~~~~~~~~~~~~sa~g~~~~~~~~ 429 (727)
|.-|.++..-||..+.++
T Consensus 311 g~~p~~~s~srs~~~~~~-------------------------------------------------------------- 328 (563)
T TIGR00815 311 SCYPATGSLSRTAVNAKA-------------------------------------------------------------- 328 (563)
T ss_pred CccCCCCcchHHHHHHhc--------------------------------------------------------------
Confidence 999988877555443322
Q ss_pred cccchhhhhhhhhhhhhhhhhccCCCCCCCCcccccchhhcccccCcceeeeechhhHHHHHHHHHH-HhhccccCccch
Q 004855 430 YTIGIITIGLKELKESTIQAASCTGNLNAPVDETLFDIEKEIDDLLPVEVKEQRLSNLLQAIMVGGC-VAAMPFLKMIPT 508 (727)
Q Consensus 430 ~~~~~~~~~~~~lk~~~~~~~~~~G~~~ap~~~~~fd~e~~i~~~l~v~V~EQRvS~ll~~lLig~s-v~~~PvL~~IP~ 508 (727)
|. -+|+++++.++++.+. +++.|++..||+
T Consensus 329 ------------------------G~-------------------------~t~~a~i~~~~~~l~~~l~~~~~l~~iP~ 359 (563)
T TIGR00815 329 ------------------------GC-------------------------RTQLSGVVTAIVVLLVLLVLTPLFYYIPQ 359 (563)
T ss_pred ------------------------CC-------------------------cchHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 32 3689999999888777 446789999999
Q ss_pred hhhhhHHHhhhcccCCC
Q 004855 509 SVLWGYFAFMAIESLPG 525 (727)
Q Consensus 509 sVL~GvFlYMGi~SL~G 525 (727)
++|.|+-++.|+. |..
T Consensus 360 ~~la~ili~~~~~-l~~ 375 (563)
T TIGR00815 360 AALAAIIISAVRG-LID 375 (563)
T ss_pred HHHHHHHHHHHhc-ccC
Confidence 9999999999999 653
No 6
>PRK11660 putative transporter; Provisional
Probab=99.63 E-value=2.2e-14 Score=163.94 Aligned_cols=329 Identities=15% Similarity=0.163 Sum_probs=208.8
Q ss_pred hhhh-HHHHhhccchhccCcchhHHHHHhhhhhhHHHHhhcCcceeeeccCchHHHHHHHHHHHHHhhhccccchhhHHH
Q 004855 47 SAIP-VISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWS 125 (727)
Q Consensus 47 ~llP-aIaFG~ll~~~T~g~lgv~E~LlStai~GiifslfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~ 125 (727)
..+| ++||+..-+ +..+-.|.|+.++++++++||+.|.++.|+|+.+.++ +....++.+ +...
T Consensus 42 ~~iPq~mayA~lag------~pp~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~---~~~~~~~~~-------~~~~ 105 (568)
T PRK11660 42 IAIPLAMALAIASG------VPPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVI---LYPVSQQFG-------LAGL 105 (568)
T ss_pred HHHHHHHHHHHHcC------CChHHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHH---HHHHHHHhh-------HHHH
Confidence 3567 899985422 4455579999999999999999999999999887764 344444433 1234
Q ss_pred HHHHHHHHHHHHHHHHhcccccceecccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCccccc---cccccchhHH
Q 004855 126 GWVCVWTALLLLMLSILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQF---IPSWRFANGM 202 (727)
Q Consensus 126 ~WVgiWta~~l~llai~nas~li~~~TRft~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~---~~~~~~~~~l 202 (727)
.+.++.+++++++++.++...+++|+.+-.-.-|..-++++.+...++.+... +.+....+-.+.. -.+.... ..
T Consensus 106 ~~~~~l~Gii~~l~gllrlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~-~~~~~~~~~~~~l~~~~~~l~~~-~~ 183 (568)
T PRK11660 106 LVATLMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGL-QMAHVPEHYLEKVGALFQALPTI-NW 183 (568)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCccHHHHHHHHHHhhccC-CH
Confidence 56799999999999999999999999988888888888888878777776442 1110000000000 0000000 12
Q ss_pred HHHHHHHHHHHHHHhhcccccccccccccchhhcchhhhHHHHHHhhhccccCcc--------------cCCC-----Cc
Q 004855 203 FALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSGD--------------VPKG-----IP 263 (727)
Q Consensus 203 lsliL~~gt~~~a~~lr~~r~s~y~~~~vR~~IaDygvpiaVlv~t~vsy~~~~~--------------vP~g-----~~ 263 (727)
..+++++.++.+.+..++.+ +..|+ ..++|++.+.++|..... +|++ +|
T Consensus 184 ~~~~~~~~~l~lll~~~~~~--~~iP~----------~li~iiv~t~~~~~~~~~~~~v~~vg~~~~~~~~~g~~~~~ip 251 (568)
T PRK11660 184 GDALIGIVTLGVLILWPRLK--IRLPG----------HLPALLAGTAVMGVLNLLGGHVATIGSRFHYVLADGSQGNGIP 251 (568)
T ss_pred HHHHHHHHHHHHHHHHHhhc--ccCch----------HHHHHHHHHHHHHHHhccCCCceeecccccccccccccccCCC
Confidence 23344444443333333332 12232 346677777776554321 1111 11
Q ss_pred cccCCCCCCCCCCCCCceEeccCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcccccCCCCCCccchhHHHHHHh
Q 004855 264 RRLFSPNPWSPGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLT 343 (727)
Q Consensus 264 ~rl~~p~p~~p~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~DhnIss~iaq~ke~kLkKpsgyH~DLlllGi~t 343 (727)
+.+ |....|....++. .+..++.+..+..-+..|+.++++-|.|+..++...+++. +|....+.||+.+|+.|
T Consensus 252 ~~~--p~~~~p~~~~~~~--~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~---~~~~d~n~EL~a~G~aN 324 (568)
T PRK11660 252 PLL--PQFVLPWNLPGAD--GQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLDGMT---GTKHSANSELVGQGLGN 324 (568)
T ss_pred CCC--CCCCCCccccccc--cccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCCCcHHHHHHhHHH
Confidence 111 1100010000000 0122344444555666788899999999876655544432 24567899999999999
Q ss_pred hhhhhcCCCCCCCCCCCCchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhccc
Q 004855 344 LLCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGQQ 423 (727)
Q Consensus 344 ~icgllGLP~~nGaipqSp~Ht~SLav~~~~~~~~~~v~~a~~~~~~~~s~~~~y~~~~~~~~~~~~~~~~~~~sa~g~~ 423 (727)
+++|++|-.|.+|...||-++.++
T Consensus 325 i~~~~fgg~p~~~s~srSa~n~~a-------------------------------------------------------- 348 (568)
T PRK11660 325 IVAPFFGGITATAAIARSAANVRA-------------------------------------------------------- 348 (568)
T ss_pred HHHHHhCcccccchHHHHHHHHhc--------------------------------------------------------
Confidence 999999999988766555332222
Q ss_pred cccccccccchhhhhhhhhhhhhhhhhccCCCCCCCCcccccchhhcccccCcceeeeechhhHHHHHHHHHHH-hhccc
Q 004855 424 KHKYAGYTIGIITIGLKELKESTIQAASCTGNLNAPVDETLFDIEKEIDDLLPVEVKEQRLSNLLQAIMVGGCV-AAMPF 502 (727)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~lk~~~~~~~~~~G~~~ap~~~~~fd~e~~i~~~l~v~V~EQRvS~ll~~lLig~sv-~~~Pv 502 (727)
|. .+|++++..++++++.+ ++.|+
T Consensus 349 ------------------------------Ga-------------------------rT~la~iv~a~~~ll~ll~l~~l 373 (568)
T PRK11660 349 ------------------------------GA-------------------------TSPISAVIHALLVLLALLVLAPL 373 (568)
T ss_pred ------------------------------CC-------------------------CcHHHHHHHHHHHHHHHHHHHHH
Confidence 33 47999999999998885 67899
Q ss_pred cCccchhhhhhHHHhhhcccC
Q 004855 503 LKMIPTSVLWGYFAFMAIESL 523 (727)
Q Consensus 503 L~~IP~sVL~GvFlYMGi~SL 523 (727)
+..||.+||+|+.+|.|+.-+
T Consensus 374 l~~iP~~vLa~ili~~~~~m~ 394 (568)
T PRK11660 374 LSYLPLSAMAALLLMVAWNMS 394 (568)
T ss_pred HHhCcHHHHHHHHHHHHHHhh
Confidence 999999999999999998743
No 7
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=98.99 E-value=6.6e-08 Score=113.28 Aligned_cols=276 Identities=18% Similarity=0.220 Sum_probs=163.0
Q ss_pred hh-HHHHhhccchhccCcchhHHHHHhhhhhhHHHHhhcCcceeeeccCchHHHHHHHHH-HHHHhhhc-cccchhhHHH
Q 004855 49 IP-VISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMF-NFAKERAD-LGRNLFIAWS 125 (727)
Q Consensus 49 lP-aIaFG~ll~~~T~g~lgv~E~LlStai~GiifslfgGQPL~IlGvTGP~~if~~~ly-~f~~~~~~-lg~~~fL~~~ 125 (727)
.| +|||+.+-+ +-.+-.|.|+.++.++|++||-++=.-+|+++=+.+|...+- +.+.+... .....++.-.
T Consensus 95 VPQ~iaYa~la~------lppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va 168 (665)
T KOG0236|consen 95 VPQGLAYALLAG------LPPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVA 168 (665)
T ss_pred cchHHHHHHHcC------CChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHHH
Confidence 45 677777644 455668999999999999999999988886666555433221 34433210 0013577778
Q ss_pred HHHHHHHHHHHHHHHHhcccccceecccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCccccc------ccccc-c
Q 004855 126 GWVCVWTALLLLMLSILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQF------IPSWR-F 198 (727)
Q Consensus 126 ~WVgiWta~~l~llai~nas~li~~~TRft~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~------~~~~~-~ 198 (727)
+-+++-++++.+++++++...++.|+++-.=-.|..-.|+.-+...+|.+.+.-+.+...++-..-+ ...|. .
T Consensus 169 ~~lt~l~Giiq~~mG~lrLGfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (665)
T KOG0236|consen 169 TTLTFLTGIIQLILGLLRLGFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLPKTL 248 (665)
T ss_pred HHHHHHHHHHHHHHHHHhcChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhcccccc
Confidence 8899999999999999999999999998888888888899888889999887543333222211100 00011 1
Q ss_pred hhHHHHHHHHHHHHHHHHh--hccccccccc-ccccchhhcchhhhHHHHHHhhhccccCcccCCCCcccc-CCCCCCCC
Q 004855 199 ANGMFALVLSFGLLYTGLK--SRKARSWRYG-TGWLRSVIADYGVPLMVVVWTGVSYIPSGDVPKGIPRRL-FSPNPWSP 274 (727)
Q Consensus 199 ~~~llsliL~~gt~~~a~~--lr~~r~s~y~-~~~vR~~IaDygvpiaVlv~t~vsy~~~~~vP~g~~~rl-~~p~p~~p 274 (727)
....++++... ++...+ .++.+ +++. -.--| -.+.|++.|+++|....+-- +.+..+ ..|..+.|
T Consensus 249 ~~~~~~l~~l~--~L~~~k~~~~~~~-~k~~~v~~~~-------~li~vIi~T~~~~~~~~~~~-~~~~~~~~i~~g~~~ 317 (665)
T KOG0236|consen 249 ATLVLSLIFLV--VLLLTKELNPKFK-KKLFSVPIPF-------ELIVVIIGTLISYIFRLEGR-YGPIIVGEIPRGFPP 317 (665)
T ss_pred hhhhhHHHHHH--HHHHHHHhhhhhc-ccceeecccH-------HHHHHHHHHHHHHHhccccc-cCCeeeccCCCCCCC
Confidence 22333332222 112222 11111 2221 11111 23788888999887743210 111111 12211111
Q ss_pred CCCCCceEeccCCCchHHHHHHHHHH-HHHHHHHHHHhhhhH--HHHhhcccccCCCCCCccchhHHHHHHhhhhhhcCC
Q 004855 275 GAYENWTVIKDMLNVPIVYIIGAFIP-ATMIAVLYYFDHSVA--SQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGI 351 (727)
Q Consensus 275 ~~~r~W~V~~~~~~vp~~~i~~A~iP-A~ll~iL~F~DhnIs--s~iaq~ke~kLkKpsgyH~DLlllGi~t~icgllGL 351 (727)
..+|.......+++ |+.+++.-+.+| |+ ...+.++.+ .-.-+.||+.+|++|+++|++|.
T Consensus 318 ------------~~lp~~~~~~~~~~~~~~i~iva~~~~-iai~k~fa~~~~y----~vd~nqELiAlG~~Ni~sSff~~ 380 (665)
T KOG0236|consen 318 ------------PSLPPLSLTPQVIPDAFAIAIVALLEH-IAIGKSFASLHGY----KVDSNQELIALGISNILSSFFGC 380 (665)
T ss_pred ------------CCCCChhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCC----eeCCChHHHHHHHHHHhhhhhce
Confidence 11111111223344 667777777777 54 444443333 34567899999999999999997
Q ss_pred CCCCCCC
Q 004855 352 PPSNGVI 358 (727)
Q Consensus 352 P~~nGai 358 (727)
=|.+|..
T Consensus 381 ~p~tgs~ 387 (665)
T KOG0236|consen 381 YPTTGSF 387 (665)
T ss_pred Ecccchh
Confidence 7766654
No 8
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.97 E-value=2.4e-09 Score=111.01 Aligned_cols=249 Identities=21% Similarity=0.274 Sum_probs=155.0
Q ss_pred HHhcccccceecccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCccccccccc-cchh--HHHHHHHHHHHHHHHH
Q 004855 140 SILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIPSW-RFAN--GMFALVLSFGLLYTGL 216 (727)
Q Consensus 140 ai~nas~li~~~TRft~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~~~~~-~~~~--~llsliL~~gt~~~a~ 216 (727)
+.++.+.+++|+++-.-.-|..-++++.+...++.+...=..+..++.. .....-+ ...+ ...+++++..++...+
T Consensus 2 GllrlG~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 80 (280)
T PF00916_consen 2 GLLRLGFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLF-SFIRALFQLISTITNWPTLAIGLVALVFLL 80 (280)
T ss_pred ccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc-chhhhhhhhhhhccchhhhhhhhHHHHHHh
Confidence 4567889999999888888989999999999999887632111111111 0000001 0001 1223333333332222
Q ss_pred hhcccc------cccccccccchhhcchhhhHHHHHHhhhccccCc---------ccCCCCccccCCCCCCCCCCCCCce
Q 004855 217 KSRKAR------SWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSG---------DVPKGIPRRLFSPNPWSPGAYENWT 281 (727)
Q Consensus 217 ~lr~~r------~s~y~~~~vR~~IaDygvpiaVlv~t~vsy~~~~---------~vP~g~~~rl~~p~p~~p~~~r~W~ 281 (727)
..+... .++..+. ..+++++.+.+++.... ++|.++| .+.-|.
T Consensus 81 ~~~~~~~~~~~~~~~~~p~----------~li~vv~~~~~~~~~~~~~~~v~~~~~i~~~lp------~~~~p~------ 138 (280)
T PF00916_consen 81 IIRLLPKRLPSRFWPPIPA----------PLIVVVLGTLLSWLFLLDKYGVAIVGEIPSGLP------PPSLPS------ 138 (280)
T ss_pred hhhhhhhhccccccccccc----------cceeeehhhhhhhhhhhccccccccccccccCc------cccCcc------
Confidence 222221 1122222 33556666666654421 2222211 111111
Q ss_pred EeccCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcccccCCCCCCccchhHHHHHHhhhhhhcCCCCCCCCCCCC
Q 004855 282 VIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQS 361 (727)
Q Consensus 282 V~~~~~~vp~~~i~~A~iPA~ll~iL~F~DhnIss~iaq~ke~kLkKpsgyH~DLlllGi~t~icgllGLP~~nGaipqS 361 (727)
.++++..+...+..|+.++++-++|+-.++...+++. +++...+.||+.+|+.|+++|++|.-|.+|..-||
T Consensus 139 -----~~~~~~~~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~---~~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~srs 210 (280)
T PF00916_consen 139 -----FDISWSLILDLLPTALAIAIVGFIESLLIAKSIAKKT---GYRIDPNQELIALGLANIVSGLFGGMPGSGSFSRS 210 (280)
T ss_pred -----cccccccccccchhHHHHHHHHHHHHHHhhhhhcccc---cccCCcHHHHHHhhhccccchhhcccccccccccc
Confidence 1122222344556788999999999988877765543 35678999999999999999999999998888777
Q ss_pred chhhhhhHHHHHHhhhhhhhhhhhhhccccccccccchhhHHHHhhhcchhhhhhhhhhccccccccccccchhhhhhhh
Q 004855 362 PMHTKSLATLKHQLLRNRLVATARTSMRKNASLGQMYGNMQEAYQQMQTPLIYQQSAAQGQQKHKYAGYTIGIITIGLKE 441 (727)
Q Consensus 362 p~Ht~SLav~~~~~~~~~~v~~a~~~~~~~~s~~~~y~~~~~~~~~~~~~~~~~~~sa~g~~~~~~~~~~~~~~~~~~~~ 441 (727)
..+.++
T Consensus 211 ~~~~~~-------------------------------------------------------------------------- 216 (280)
T PF00916_consen 211 AVNYRA-------------------------------------------------------------------------- 216 (280)
T ss_pred hHHHhc--------------------------------------------------------------------------
Confidence 665543
Q ss_pred hhhhhhhhhccCCCCCCCCcccccchhhcccccCcceeeeechhhHHHHHHHHHHHh-hccccCccchhhhhhHHHhhhc
Q 004855 442 LKESTIQAASCTGNLNAPVDETLFDIEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVA-AMPFLKMIPTSVLWGYFAFMAI 520 (727)
Q Consensus 442 lk~~~~~~~~~~G~~~ap~~~~~fd~e~~i~~~l~v~V~EQRvS~ll~~lLig~sv~-~~PvL~~IP~sVL~GvFlYMGi 520 (727)
|. .+|+++++.++.+++.++ ..|+++.||+++|.|+-+|.|+
T Consensus 217 ------------Ga-------------------------~t~~s~~~~~~~~l~~l~~~~~~l~~iP~~~La~ili~~~~ 259 (280)
T PF00916_consen 217 ------------GA-------------------------RTRLSGLISALFVLLVLLFLAPLLAYIPKAVLAAILIVVGI 259 (280)
T ss_pred ------------Cc-------------------------ceeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 479999999999887754 5689999999999999999999
Q ss_pred ccCCCchHHHH
Q 004855 521 ESLPGNQFWER 531 (727)
Q Consensus 521 ~SL~GnQf~eR 531 (727)
+ |-.-.-+.+
T Consensus 260 ~-l~~~~~~~~ 269 (280)
T PF00916_consen 260 S-LIDWSSLRR 269 (280)
T ss_pred h-hcCHHHHHH
Confidence 8 655443433
No 9
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=98.79 E-value=4.5e-07 Score=100.08 Aligned_cols=267 Identities=16% Similarity=0.109 Sum_probs=148.6
Q ss_pred hHHHHHhhhhhHHHHhhccchhcc-CcchhHHHHHhhhhhhHHHH----hhcCcceeeeccCchHHHHHHHHHHHHHhhh
Q 004855 40 TTYIFFASAIPVISFGEQLERDTE-GVLTAVQTLASTALCGIIHS----IIGGQPLLILGVAEPTVIMYTFMFNFAKERA 114 (727)
Q Consensus 40 t~fifFA~llPaIaFG~ll~~~T~-g~lgv~E~LlStai~Giifs----lfgGQPL~IlGvTGP~~if~~~ly~f~~~~~ 114 (727)
.+++|-+++++.+-.+..++-+.+ -..-++-++++++++.++++ .+|+.--.+.|++++... .++..+.+.+
T Consensus 5 ~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~---~~~~~~~~~~ 81 (406)
T TIGR03173 5 VLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVG---PMIAIGAGGG 81 (406)
T ss_pred hHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHH---HHHHHhhhhh
Confidence 356777777776655443221111 12234668899999999997 677888888998886443 4554554432
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHhcccccceecccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCccccccc
Q 004855 115 DLGRNLFIAWSGWVCVWTALLLLMLSILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIP 194 (727)
Q Consensus 115 ~lg~~~fL~~~~WVgiWta~~l~llai~nas~li~~~TRft~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~~~ 194 (727)
++-..-..++++++.++++. -...+.|+++...--.+-++|++..+.-+++..... + ....+.
T Consensus 82 -------~~~~~ga~~v~Gii~illg~-~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~---~-----~~~~~~- 144 (406)
T TIGR03173 82 -------LGAIFGAVIVAGLFVILLAP-FFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGG---A-----GAPDFG- 144 (406)
T ss_pred -------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccC---C-----Cccccc-
Confidence 24445678889999888883 445667777765555666677776666666654221 0 000000
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhcccccccccccccchhhcchhhhHHHHHHhhhccccCc-ccCCCCccccCCCCCC-
Q 004855 195 SWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSG-DVPKGIPRRLFSPNPW- 272 (727)
Q Consensus 195 ~~~~~~~llsliL~~gt~~~a~~lr~~r~s~y~~~~vR~~IaDygvpiaVlv~t~vsy~~~~-~vP~g~~~rl~~p~p~- 272 (727)
...+ .++++.++.+.+..++ +.|+++.-+++.+++++.+.+++..+. +.+. +. ..||
T Consensus 145 --~~~~----~~l~l~~l~~~il~~~---------~~~~~~~~~aiLi~ivvg~iva~~~g~~~~~~-i~-----~~~~~ 203 (406)
T TIGR03173 145 --SPQN----LGLALLTLVIILLLNR---------FGKGFLRSIAVLLGLVVGTIVAAALGMVDFSG-VA-----EAPWF 203 (406)
T ss_pred --chHH----HHHHHHHHHHHHHHHH---------HhhhHHHHhHHHHHHHHHHHHHHHhcCCCchh-hc-----cCCee
Confidence 1111 1222222222222211 223455667899999999888866542 2211 10 0111
Q ss_pred -CCCCCCCceEeccCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcccccCCCCCCccchhHHHHHHhhhhhhcCC
Q 004855 273 -SPGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGI 351 (727)
Q Consensus 273 -~p~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~DhnIss~iaq~ke~kLkKpsgyH~DLlllGi~t~icgllGL 351 (727)
-|. .-.|. +.+++ +.++++.+.+++.-++|+.-+..-+++...+-.+....+.++...|+.|+++|++|-
T Consensus 204 ~~P~-~~~~~----~P~f~----~~~~~~~~~~~lv~~~esig~~~a~~~~~g~~~~~~~~~~~l~~~Gi~~i~aglfG~ 274 (406)
T TIGR03173 204 ALPT-PFHFG----APTFD----LVAILTMIIVYLVSMVETTGDFLALGEITGRPITEKDLAGGLRADGLGSALGGLFNT 274 (406)
T ss_pred eCCC-CCcCC----CCeeC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhccchHHhccHHHHHHHHhCC
Confidence 010 00111 00112 223445556777777887555444333322211235678899999999999999999
Q ss_pred CCCCC
Q 004855 352 PPSNG 356 (727)
Q Consensus 352 P~~nG 356 (727)
.+.++
T Consensus 275 ~p~t~ 279 (406)
T TIGR03173 275 FPYTS 279 (406)
T ss_pred CCCcc
Confidence 88654
No 10
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=98.70 E-value=2.6e-06 Score=94.77 Aligned_cols=270 Identities=15% Similarity=0.129 Sum_probs=155.6
Q ss_pred hHHHHHhhhhhHHHHhhccchhccCcchhHHHHHhhhhhhHHHHhhcCcc---eeeeccCchHHHHHHHHHHHHHhhhcc
Q 004855 40 TTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQP---LLILGVAEPTVIMYTFMFNFAKERADL 116 (727)
Q Consensus 40 t~fifFA~llPaIaFG~ll~~~T~g~lgv~E~LlStai~GiifslfgGQP---L~IlGvTGP~~if~~~ly~f~~~~~~l 116 (727)
.+.+|-++.+|-+..|..+-+.-|-.+=++-+++.++++-+++++.++.| ..+.|++--. +- +-.+.... .
T Consensus 15 ~l~~~~~~i~~p~iv~~~~l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~--i~---~~~~~~~~-~ 88 (415)
T TIGR00801 15 LLAMFGGTVLVPLLVGLAPLSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAF--VS---PMIAIGSG-L 88 (415)
T ss_pred HHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHH--HH---HHHHHHhc-c
Confidence 45677788888777776652223333446678999999999999999999 6777765221 11 11112111 0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHh---cc-cccceecccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCccccc
Q 004855 117 GRNLFIAWSGWVCVWTALLLLMLSIL---GA-CSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQF 192 (727)
Q Consensus 117 g~~~fL~~~~WVgiWta~~l~llai~---na-s~li~~~TRft~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~ 192 (727)
+ + +-..=..++++++.++++.+ .. -.+.++++....-...++|++..+.-|++.+......| ...+
T Consensus 89 ~---~-~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~-----~~~~- 158 (415)
T TIGR00801 89 G---I-PAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAM-----SSAT- 158 (415)
T ss_pred C---H-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCcc-----cccc-
Confidence 1 0 11122556667777777764 12 23467788888888899999988888988764322110 0000
Q ss_pred cccccchhHHHHHHHHHHHHHHHHhhcccccccccccccchhhcchhhhHHHHHHhhhccccCc-ccCCCCccccCCCCC
Q 004855 193 IPSWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSG-DVPKGIPRRLFSPNP 271 (727)
Q Consensus 193 ~~~~~~~~~llsliL~~gt~~~a~~lr~~r~s~y~~~~vR~~IaDygvpiaVlv~t~vsy~~~~-~vP~g~~~rl~~p~p 271 (727)
+. + .-.+++++.++.+.+..+ ++.|+++.-+++.+++++.+.+++..+. +.+. + ...|
T Consensus 159 ---~~--~-~~~~~vg~~~l~~~vl~~---------~~~~g~~~~~aiLigiv~g~i~a~~lg~~~~~~-v-----~~~~ 217 (415)
T TIGR00801 159 ---YG--S-LENLGVAFVVLALIILLN---------RFGKGFLKSISILIGILVGYILALFMGIVDFSP-V-----IDAP 217 (415)
T ss_pred ---cC--c-hhhHHHHHHHHHHHHHHH---------HHHhhHHHHHHHHHHHHHHHHHHHHcCCccchh-h-----ccCc
Confidence 10 0 112344444444433222 1234456677899999999988876642 2211 1 1112
Q ss_pred CC--CCCCCCceEeccCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcc-cccCCCCCCccchhHHHHHHhhhhhh
Q 004855 272 WS--PGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQK-EFNLRKPSSYHYDLLLLGFLTLLCGL 348 (727)
Q Consensus 272 ~~--p~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~DhnIss~iaq~k-e~kLkKpsgyH~DLlllGi~t~icgl 348 (727)
|- |. ...| . +++. ..++.+.+.+++.-++|+.=+..-+.++ +.+..+....+-+++..|+.|+++|+
T Consensus 218 ~~~lP~-~~~~----g-~~f~----~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~agl 287 (415)
T TIGR00801 218 WFSLPT-PFTF----G-PSFE----WPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLAGL 287 (415)
T ss_pred ccccCC-ccCC----C-ceec----HHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHHHh
Confidence 20 10 0000 0 0122 2344555677888889985443332332 22332356778999999999999999
Q ss_pred cCCCCCCC
Q 004855 349 IGIPPSNG 356 (727)
Q Consensus 349 lGLP~~nG 356 (727)
+|-.|.++
T Consensus 288 fG~~p~t~ 295 (415)
T TIGR00801 288 FGGFPNTT 295 (415)
T ss_pred cCCCCCcc
Confidence 99987654
No 11
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=98.19 E-value=0.00037 Score=78.54 Aligned_cols=272 Identities=14% Similarity=0.130 Sum_probs=157.8
Q ss_pred hHHHHHhhhhhHHHHhhccchhccC-cchhHHHHHhhhhhhHHHHhhcCcceeeeccCchHHHHHHHHHHHHHhhhcccc
Q 004855 40 TTYIFFASAIPVISFGEQLERDTEG-VLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGR 118 (727)
Q Consensus 40 t~fifFA~llPaIaFG~ll~~~T~g-~lgv~E~LlStai~GiifslfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~ 118 (727)
.+++|-.+++|.+-.+..++-..+. .+=++-+++.++++-++.+.+|..=.++.|+++..+ ..+..+|......|.
T Consensus 18 vl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~---~~~~~i~~~~~~~g~ 94 (433)
T PRK11412 18 FFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWW---GTILTITLGEASRGT 94 (433)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHH---HHHHHHHhcccccCc
Confidence 4667777888887777665543222 233557888999999999999888888888888633 345555642211111
Q ss_pred c--hhhHHHHHHHHHHHHHHHHHHHhc-ccccceecccchhhHHHHHHHHHHHHHHHHHHhhh-cccCCCCCCccccccc
Q 004855 119 N--LFIAWSGWVCVWTALLLLMLSILG-ACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEE-FRIPERENPKLVQFIP 194 (727)
Q Consensus 119 ~--~fL~~~~WVgiWta~~l~llai~n-as~li~~~TRft~EiFg~LIsvIFI~eaik~lv~~-F~~p~~~~~~~~~~~~ 194 (727)
. .-+.-..+..+-++++.++++.++ ...+.|+||-...-..=++|++-.+--+++.+... +.. .+ ++ .
T Consensus 95 ~~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~--~~-----~~-~ 166 (433)
T PRK11412 95 PINDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGI--AD-----PN-G 166 (433)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccC--cc-----cc-c
Confidence 0 011112345677788888888877 44566777877777778888888888888877542 110 00 11 0
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhcccccccccccccchhhcchhhhHHHHHHhhhcc-ccCcccCCCCccccCCCCCCC
Q 004855 195 SWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSY-IPSGDVPKGIPRRLFSPNPWS 273 (727)
Q Consensus 195 ~~~~~~~llsliL~~gt~~~a~~lr~~r~s~y~~~~vR~~IaDygvpiaVlv~t~vsy-~~~~~vP~g~~~rl~~p~p~~ 273 (727)
+|...+ +.+++.++.+.+.+. .+-|++++-|++.+++++-..+.. ..+.+..
T Consensus 167 ~~~~~~----~~~a~~~l~~il~~~---------~~~~g~~~~~svLiGiv~G~v~a~~~~g~d~~-------------- 219 (433)
T PRK11412 167 KIQLPP----FGLSVAVMCLVLAMI---------IFLPQRIARYSLLVGTIVGWILWAFCFPSSHS-------------- 219 (433)
T ss_pred ccchHH----HHHHHHHHHHHHHHH---------HHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcc--------------
Confidence 111122 333444433322221 133667888999999998777642 2221110
Q ss_pred CCCCCCceEeccCCCchHHHHHHHHHHHHHHHHHHHH----hhhhHHHHhhcccccCCCCCCccchhHHHHHHhhhhhhc
Q 004855 274 PGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYF----DHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLI 349 (727)
Q Consensus 274 p~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~----DhnIss~iaq~ke~kLkKpsgyH~DLlllGi~t~icgll 349 (727)
+...-.|... +++ .|...-..++++.+++++.-.. |...++.+.+++ ..|+..+|-=++.-|+.++++|++
T Consensus 220 ~v~~a~w~~~-pfG-~P~~F~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~---~~~~~~l~rgi~~dGi~s~laglf 294 (433)
T PRK11412 220 LSGELHWQWF-PLG-SGGALEPGIILTAVITGLVNISNTYGAIRGTDVFYPQQ---GAGNTRYRRSFVATGFMTLITVPL 294 (433)
T ss_pred hhccCCceee-cCC-CCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCCCcccccchhhccHHHHHHHhc
Confidence 0011124321 221 2210122344555555554444 444555554443 333558888899999999999999
Q ss_pred CCCCC
Q 004855 350 GIPPS 354 (727)
Q Consensus 350 GLP~~ 354 (727)
|-+|.
T Consensus 295 g~~p~ 299 (433)
T PRK11412 295 AVIPF 299 (433)
T ss_pred CCCCC
Confidence 98875
No 12
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=98.14 E-value=0.00033 Score=78.68 Aligned_cols=295 Identities=14% Similarity=0.138 Sum_probs=145.1
Q ss_pred CCCCCCCccchHhhhhhccccccccccccccccceeechhHHHHHhhhhhHHHHhhccchhccCcchhHHHHHhhhhhhH
Q 004855 1 MEETFVPFRGIKNDLRGRLMCYKQDWTSGFKAGFRILAPTTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGI 80 (727)
Q Consensus 1 ~~~t~~pF~Gi~~DikrR~p~Y~SDwtDg~~~~~~vlast~fifFA~llPaIaFG~ll~~~T~g~lgv~E~LlStai~Gi 80 (727)
|.|.+.|-==...|.+||..|=.+|.-.-...-.--+--.+.||-.++++.+-.| ++..++++.++++-+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~GlQh~lam~~~~v~~Plilg----------l~~~~tl~~sGi~Tl 70 (429)
T TIGR03616 1 MAEPWFPKWKPKQGSLEHHPVAPDERLPAAQTIVMGLQHAVAMFGATVLMPLLMG----------FDPNLTILMSGIGTL 70 (429)
T ss_pred CCCccCCCceeccccCcCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCHhHHHHHHHHHHH
Confidence 4555555322334545554433444433211000012234556666666655554 222268999999999
Q ss_pred HHHhh--cCcceeeeccCchHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHHHHhcc----cccceecccc
Q 004855 81 IHSII--GGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWVCVWTALLLLMLSILGA----CSIINRFTRV 154 (727)
Q Consensus 81 ifslf--gGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WVgiWta~~l~llai~na----s~li~~~TRf 154 (727)
+++.. ++-|+ +.|+++- |...+-..+.. ...+..++++-..-..+.++++.++++.+.. ..+.|+++-.
T Consensus 71 lQ~~~~G~rlP~-v~G~sf~---f~~~~~~~~~~-~~~~~~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPv 145 (429)
T TIGR03616 71 LFFLITGGRVPS-YLGSSAA---FVGAVIAATGY-NGQGTNPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPV 145 (429)
T ss_pred HHHHHhCCCcee-EEcCcHH---HHHHHHHHHhh-cccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcH
Confidence 99854 55555 5566554 22222222211 1111224667677788889999998888754 3344556655
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCccccccccccchhHHHHHHHHHHHHHHHHhhcccccccccccccchh
Q 004855 155 AGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIPSWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSV 234 (727)
Q Consensus 155 t~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~~~~~~~~~~llsliL~~gt~~~a~~lr~~r~s~y~~~~vR~~ 234 (727)
..-...++|++-.+.-+++.... . ++ .+| .+++. .+.++...+ +.|++
T Consensus 146 V~G~vv~lIGlsL~~vg~~~~~~---------~---~~-~~~---~al~t---l~~i~l~~l-------------~~~~~ 193 (429)
T TIGR03616 146 VTGAVVMAIGLNLAPIAVKSVSA---------S---GF-DSW---MAVLT---ILCIGAVAV-------------FTRGM 193 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc---------c---cc-ccH---HHHHH---HHHHHHHHH-------------HHHHH
Confidence 45555566666555555553211 0 00 011 12222 222222221 22456
Q ss_pred hcchhhhHHHHHHhhhccccC--cccCCCCccccCCCCCCCCCCCCCceEeccCCCchHHHHHHHHHHHHHHHHHHHHhh
Q 004855 235 IADYGVPLMVVVWTGVSYIPS--GDVPKGIPRRLFSPNPWSPGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDH 312 (727)
Q Consensus 235 IaDygvpiaVlv~t~vsy~~~--~~vP~g~~~rl~~p~p~~p~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~Dh 312 (727)
++.+++.+++++.+++++... ...++.. .+++-....|.-.+++. .|.. -+.++++-+..++.-++|+
T Consensus 194 l~~~avLiGivvG~iva~~l~~~~g~~~~v--------d~s~v~~a~~~~lP~~~-~p~f-~~~~il~~~~~~lv~~~es 263 (429)
T TIGR03616 194 LQRLLILVGLIAAYLAYFILTNVFGLGKAV--------DFSPISQAAWFGLPNFH-TPVF-NANAMLLIAPVALILVAEN 263 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCccc--------cCcccccCccccCCcCC-CceE-cHHHHHHHHHHHHHHHHHh
Confidence 677799999999888765421 0111100 01111112343222322 2211 1122223333344446777
Q ss_pred hhHHHHhhc-ccccCCCCCCccchhHHHHHHhhhhhhcCCCCC
Q 004855 313 SVASQLAQQ-KEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPS 354 (727)
Q Consensus 313 nIss~iaq~-ke~kLkKpsgyH~DLlllGi~t~icgllGLP~~ 354 (727)
-=+..-+.+ -+.+ +....+-.+...|+.|+++|++|-++.
T Consensus 264 iG~~~a~~~~~~~~--~~~~i~r~l~adGl~t~~agl~g~~p~ 304 (429)
T TIGR03616 264 LGHFKAVAGMTGRN--LDPYMGRAFVGDGLATMLSGSVGGTGV 304 (429)
T ss_pred hHHHHHHHHHhCCC--CCchhccchhhhhHHHHHHHhcCCCCC
Confidence 433222111 1111 122478889999999999999998874
No 13
>PRK10720 uracil transporter; Provisional
Probab=97.92 E-value=0.0019 Score=72.67 Aligned_cols=254 Identities=14% Similarity=0.144 Sum_probs=130.0
Q ss_pred hHHHHHhhhhhHHHHhhccchhccCcchhHHHHHhhhhhhHHHHhhcC-cceeeeccCchHHHHHHHHHHHHHhhhcccc
Q 004855 40 TTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGG-QPLLILGVAEPTVIMYTFMFNFAKERADLGR 118 (727)
Q Consensus 40 t~fifFA~llPaIaFG~ll~~~T~g~lgv~E~LlStai~GiifslfgG-QPL~IlGvTGP~~if~~~ly~f~~~~~~lg~ 118 (727)
.+.||-++++|-+-+| ++..++++.++++-++++.+.| .=-.+.|++- .|...+-.... .+.
T Consensus 24 vl~m~~~~i~~Pli~g----------l~~~~~l~~sGi~TliQ~~~~g~rlP~~~G~sf---a~i~~~~~~~~-~~~--- 86 (428)
T PRK10720 24 LFAMFGATVLVPILFH----------INPATVLLFNGIGTLLYLFICKGKIPAYLGSSF---AFISPVLLLLP-LGY--- 86 (428)
T ss_pred HHHHHHHHHHHHhhcC----------CCHHHHHHHHHHHHHHHHHhccCccceEEeCcH---HHHHHHHHHHH-ccH---
Confidence 4568888888888774 3345689999999999998775 3333555432 22222222222 111
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhc----ccccceecccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCccccccc
Q 004855 119 NLFIAWSGWVCVWTALLLLMLSILG----ACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIP 194 (727)
Q Consensus 119 ~~fL~~~~WVgiWta~~l~llai~n----as~li~~~TRft~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~~~ 194 (727)
+-..=..++++++.++++.+- ...+.+.|+...--.|-++|++--+.-+++.. .. .+ .+. . +
T Consensus 87 ----~~~lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~~-g~--~~--~~~--~-~-- 152 (428)
T PRK10720 87 ----EVALGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMA-GL--LP--AEG--Q-T-- 152 (428)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhhc-cc--cC--CCC--c-c--
Confidence 112236788888888888862 22456677776666666666665444444311 10 00 000 0 0
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhcccccccccccccchhhcchhhhHHHHHHhhhccccCc-ccCCCCccccCCCCCCC
Q 004855 195 SWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSG-DVPKGIPRRLFSPNPWS 273 (727)
Q Consensus 195 ~~~~~~~llsliL~~gt~~~a~~lr~~r~s~y~~~~vR~~IaDygvpiaVlv~t~vsy~~~~-~vP~g~~~rl~~p~p~~ 273 (727)
.. ...+++++.++.+.+... + +.|+++.-+++.+++++.+.+++..+. +.+ .+. ..+|.
T Consensus 153 -~~----~~~~~lalv~l~iil~~~-----~----~~kg~~~~~~iLigIvvG~ila~~lG~~d~~-~v~-----~a~~~ 212 (428)
T PRK10720 153 -PD----SKTIIISMVTLAVTVLGS-----V----LFRGFLAIIPILIGVLVGYALSFAMGMVDTT-PII-----EAHWF 212 (428)
T ss_pred -cc----hHHHHHHHHHHHHHHHHH-----H----HhccHHHHhHHHHHHHHHHHHHHHhcCCCHH-Hhh-----cCccc
Confidence 01 112334444433332211 1 123344556688999998888866642 111 110 01111
Q ss_pred CCCCCCceEeccCCCchHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhc--ccccCCCCCCccchhHHHHHHhhhhhhcCC
Q 004855 274 PGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHSVASQLAQQ--KEFNLRKPSSYHYDLLLLGFLTLLCGLIGI 351 (727)
Q Consensus 274 p~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~DhnIss~iaq~--ke~kLkKpsgyH~DLlllGi~t~icgllGL 351 (727)
. ...|.. + ++.+..+. ++.|..+ ..++|+ +.+..+-. .+.+..|....+-+++..|+.|+++|++|-
T Consensus 213 ~--lP~~~~--P--~fd~~~il-~l~~~~l---v~~~Es-iG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glfG~ 281 (428)
T PRK10720 213 A--LPTFYT--P--RFEWFAIL-TILPAAL---VVIAEH-VGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGS 281 (428)
T ss_pred c--CCCCCC--C--cCcHHHHH-HHHHHHH---HHHHHH-HHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhcCC
Confidence 0 000110 1 12222222 3333332 334676 33222211 112222356789999999999999999999
Q ss_pred CCCC
Q 004855 352 PPSN 355 (727)
Q Consensus 352 P~~n 355 (727)
+|.+
T Consensus 282 ~p~t 285 (428)
T PRK10720 282 TPNT 285 (428)
T ss_pred CCcc
Confidence 8753
No 14
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=97.75 E-value=0.0011 Score=73.31 Aligned_cols=265 Identities=17% Similarity=0.228 Sum_probs=128.3
Q ss_pred HHHHHhhhhhHHHHhhcc--chhccCcchhHHHHHhhhhhhHHHHhhcCcceeee-ccCchHHHHHHHHHHHHHh----h
Q 004855 41 TYIFFASAIPVISFGEQL--ERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLIL-GVAEPTVIMYTFMFNFAKE----R 113 (727)
Q Consensus 41 ~fifFA~llPaIaFG~ll--~~~T~g~lgv~E~LlStai~GiifslfgGQPL~Il-GvTGP~~if~~~ly~f~~~----~ 113 (727)
+.++...+...+-.+..+ .+++. .=+.-++++++++-+++++..|-|+-+. |.+.. .+. .+..+.. .
T Consensus 12 l~m~~~~iv~P~il~~~~g~~~~~~--~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~-~~~---~~~~~~g~~~~~ 85 (389)
T PF00860_consen 12 LAMFYIIIVVPLILAAAFGLDADTA--ALISATFLVSGIATLLQGLPAGHRLPLVPGPSFA-FIF---AFMIVIGMAESG 85 (389)
T ss_dssp HHHHHHHHHHHHTTTS-------------HHHHHHHHHHHHHHHHHHTTT-----EEE-GG-GHH---HHHGGG-----H
T ss_pred HHHHHHHHHhHHHHhhcccccchhh--HHHHHHHHHHHHHHHHHHhcCCCceecccccchh-hhh---hhhcccccccch
Confidence 334444444444444333 34344 3367789999999999999778887665 44444 322 2222211 1
Q ss_pred hccccchhhHHHHHHHHHHHHHHHHHHHhccc-ccceecccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCccccc
Q 004855 114 ADLGRNLFIAWSGWVCVWTALLLLMLSILGAC-SIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQF 192 (727)
Q Consensus 114 ~~lg~~~fL~~~~WVgiWta~~l~llai~nas-~li~~~TRft~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~ 192 (727)
+ .=++-..=..++.+++.++++.++.- .+.+.++.-.-....++|++-...-+++.+...-.. .+. ..+
T Consensus 86 ~-----~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~---~~~--~~~ 155 (389)
T PF00860_consen 86 G-----YGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGN---PDG--LLV 155 (389)
T ss_dssp H-----HHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS------BTT---B-
T ss_pred h-----hchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhcccccccc---ccc--ccc
Confidence 1 01122223668889999999999985 566778877788888899988888888876442211 011 000
Q ss_pred cccccchhHHHHHHHHHHHHHHHHhhcccccccccccccchhhcchhhhHHHHHHhhhccccC-cccCCCCccccCCCCC
Q 004855 193 IPSWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPS-GDVPKGIPRRLFSPNP 271 (727)
Q Consensus 193 ~~~~~~~~~llsliL~~gt~~~a~~lr~~r~s~y~~~~vR~~IaDygvpiaVlv~t~vsy~~~-~~vP~g~~~rl~~p~p 271 (727)
....+...+ +.++...+.... +.|++..-|++.+++++-+.+++... .+.+..+ ...|
T Consensus 156 ---~~~~~~~~~----~~~~~~~~~~~~---------~~~~~~~~~ailigi~~g~i~~~~~g~~~~~~~~-----~~~~ 214 (389)
T PF00860_consen 156 ---GDGKNLGLA----VLTLLFILLLSL---------FLKGFLRKGAILIGIIAGWIVAAILGVVDFSPSV-----SSAP 214 (389)
T ss_dssp -----HHHHHHH----HHHHHHHHHHHH---------SSSTTTTTHHHHHHHHHHHHHHHHHHHTTSSH-H-----HHS-
T ss_pred ---ccccccccc----cccchhhhhhhh---------hhhhhcccccchhhhhhhhhhhhcccccccCccc-----cccc
Confidence 011111222 222222222111 13455567889999999888876553 1111101 1112
Q ss_pred CCCCCCCCceEeccC--CCchHHHHHHHHHHHHHHHHHHHHhhh----hHHHHhhcccccCCCCCCccchhHHHHHHhhh
Q 004855 272 WSPGAYENWTVIKDM--LNVPIVYIIGAFIPATMIAVLYYFDHS----VASQLAQQKEFNLRKPSSYHYDLLLLGFLTLL 345 (727)
Q Consensus 272 ~~p~~~r~W~V~~~~--~~vp~~~i~~A~iPA~ll~iL~F~Dhn----Iss~iaq~ke~kLkKpsgyH~DLlllGi~t~i 345 (727)
| +-.+.. +..|. .-..++++.+.+++.-++|+- -.+.+++++ .++....+.-++.-|+.+++
T Consensus 215 ~--------~~~p~~~~~g~p~-f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~---~~~~~~~~r~l~~dg~~~~l 282 (389)
T PF00860_consen 215 W--------FSLPSPFPFGWPS-FDPGAILTFLIFALVAMFESIGTIVAVARIAGKD---DPRPPRIRRGLLADGLGTIL 282 (389)
T ss_dssp S--------S---------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS----TCCCCCHHHHHHHHHHHHHH
T ss_pred c--------ccccccccccccc-ccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCC---Cccchhhcccceeeeeeeee
Confidence 2 111100 01111 123344445555555566652 222333332 22367788899999999999
Q ss_pred hhhcCCCCC
Q 004855 346 CGLIGIPPS 354 (727)
Q Consensus 346 cgllGLP~~ 354 (727)
+|++|-.+.
T Consensus 283 ~gl~G~~~~ 291 (389)
T PF00860_consen 283 AGLFGTSPT 291 (389)
T ss_dssp HHHHT---E
T ss_pred chhhcCCCC
Confidence 999998764
No 15
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=97.17 E-value=0.019 Score=65.21 Aligned_cols=269 Identities=18% Similarity=0.162 Sum_probs=159.3
Q ss_pred hHHHHHhhhhhHHHHhhccchhc-cCcchhHHHHHhhhhhhHHHHhhcC----cceeeeccCchHHHHHHHHHHHHHhhh
Q 004855 40 TTYIFFASAIPVISFGEQLERDT-EGVLTAVQTLASTALCGIIHSIIGG----QPLLILGVAEPTVIMYTFMFNFAKERA 114 (727)
Q Consensus 40 t~fifFA~llPaIaFG~ll~~~T-~g~lgv~E~LlStai~GiifslfgG----QPL~IlGvTGP~~if~~~ly~f~~~~~ 114 (727)
.+.||-+.+++.+.-|..++-.+ +-.+=++-.|++++++-+++++-.+ |=..++|++-- |...+-...++.+
T Consensus 26 ~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFa---fi~p~i~~~~~~g 102 (451)
T COG2233 26 LLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFA---FVAPMIAIGGTTG 102 (451)
T ss_pred HHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHH---HHHHHHHHHhccC
Confidence 67899999999888887765432 2233355678899999999998444 66678887653 2333444444432
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHhccc-ccceecccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcccccc
Q 004855 115 DLGRNLFIAWSGWVCVWTALLLLMLSILGAC-SIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFI 193 (727)
Q Consensus 115 ~lg~~~fL~~~~WVgiWta~~l~llai~nas-~li~~~TRft~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~~ 193 (727)
+ + ++ ....++-.+.++.++...=.. .+.|.||-..--..-++|++-.+.-|++.+...... ..+.+..
T Consensus 103 ~-~----~~-~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~~----~~~~~~~- 171 (451)
T COG2233 103 D-G----IA-ALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGA----AGNPDFG- 171 (451)
T ss_pred C-c----hH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCCC----CCCcccC-
Confidence 0 0 11 112333333333333333233 677778877777777888888888888887664321 1111000
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhcccccccccccccchhhcchhhhHHHHHHhhhccccCcccCCCCccccCCCCCCC
Q 004855 194 PSWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTGWLRSVIADYGVPLMVVVWTGVSYIPSGDVPKGIPRRLFSPNPWS 273 (727)
Q Consensus 194 ~~~~~~~~llsliL~~gt~~~a~~lr~~r~s~y~~~~vR~~IaDygvpiaVlv~t~vsy~~~~~vP~g~~~rl~~p~p~~ 273 (727)
..-.+.+++.|+.+.+... +|+ |.+++-+++.+++++-++++++.+ .+. ++
T Consensus 172 -------~~~~l~la~~tl~~il~~~-----~f~----~g~~~~i~ILiGlv~G~~la~~~G-~vd------------f~ 222 (451)
T COG2233 172 -------SLENLGLALVTLLIILLIN-----RFG----KGFLRRIPILIGLVVGYLLALFMG-MVD------------FS 222 (451)
T ss_pred -------chhHHHHHHHHHHHHHHHH-----HHh----hhHHHHHHHHHHHHHHHHHHHHhC-CcC------------cc
Confidence 1223455666665544332 333 456667788999998888887765 221 11
Q ss_pred CCCCCCceEeccCCCchHHHHHHHHHHHHHHHHHHHHhhh----hHHHHhhcccccCCCCCCccchhHHHHHHhhhhhhc
Q 004855 274 PGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLYYFDHS----VASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLI 349 (727)
Q Consensus 274 p~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~Dhn----Iss~iaq~ke~kLkKpsgyH~DLlllGi~t~icgll 349 (727)
+-....|+-++.........-+.|+++.+.+++.-..||- .++.+..| ++.|.+++|--++.=|+.++++|++
T Consensus 223 ~v~~a~w~~~P~~~~fg~~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~---~~~~~~~l~rg~~aDGlat~iag~f 299 (451)
T COG2233 223 GVAEAPWFALPTPFYFGMAFDWGAILTMLPVAIVTIVEHTGDITATGEITGR---DLDGKPRLRRGLLADGLATLIAGLF 299 (451)
T ss_pred ccccCceeeCCcccCCCeeecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCC---cCccCcccccceeeccHHHHHHHhc
Confidence 1112335433322211112234666777777777777772 23344433 4555688999999999999999999
Q ss_pred CCCCC
Q 004855 350 GIPPS 354 (727)
Q Consensus 350 GLP~~ 354 (727)
|-||.
T Consensus 300 g~~p~ 304 (451)
T COG2233 300 GGFPN 304 (451)
T ss_pred CCCCC
Confidence 99985
No 16
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=86.06 E-value=0.46 Score=42.59 Aligned_cols=50 Identities=16% Similarity=0.321 Sum_probs=41.3
Q ss_pred hhhh-HHHHhhccchhccCcchhHHHHHhhhhhhHHHHhhcCcceeeeccCchHHHH
Q 004855 47 SAIP-VISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIM 102 (727)
Q Consensus 47 ~llP-aIaFG~ll~~~T~g~lgv~E~LlStai~GiifslfgGQPL~IlGvTGP~~if 102 (727)
..+| +++|+.+-+ +...-.|.++.++++++++||+.|..+.|+|+.+.++
T Consensus 29 ~~iPq~~a~A~lAg------~pp~~GLy~a~~~~liyalfG~s~~~~~Gp~a~~s~l 79 (84)
T PF13792_consen 29 VAIPQGMAYALLAG------VPPIYGLYAAIIPPLIYALFGSSRHMIVGPTAAMSLL 79 (84)
T ss_pred HHHHHHHHHHHHcC------CCCCeeeHHHHHHHHHHhhccCCCccccChHHHHHHH
Confidence 3578 999996544 3355579999999999999999999999999987764
No 17
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=85.82 E-value=37 Score=39.67 Aligned_cols=53 Identities=19% Similarity=0.283 Sum_probs=40.3
Q ss_pred ceeeeechhhHHHHHHHHHHHh--hccccCccchhhhhhHHHhh----hcccCCCchHH
Q 004855 477 VEVKEQRLSNLLQAIMVGGCVA--AMPFLKMIPTSVLWGYFAFM----AIESLPGNQFW 529 (727)
Q Consensus 477 v~V~EQRvS~ll~~lLig~sv~--~~PvL~~IP~sVL~GvFlYM----Gi~SL~GnQf~ 529 (727)
.+|---||=.+....||..+++ ..-++..||.++..|++..+ +--+|+.-||.
T Consensus 343 TKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~~~~mv~avgLSnLQf~ 401 (510)
T KOG1292|consen 343 TKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCILFGMVGAVGLSNLQFV 401 (510)
T ss_pred eeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhhheee
Confidence 3666778888888899988886 34689999999999987643 55566666654
No 18
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=84.57 E-value=86 Score=36.36 Aligned_cols=76 Identities=20% Similarity=0.291 Sum_probs=54.1
Q ss_pred HHHHHhhhhhhHHHHhhcCcceeeeccCchHHHHHHHHHHHHHhhhccccchhhHHHH--HHHHHHHHHHHHHHHhcccc
Q 004855 69 VQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSG--WVCVWTALLLLMLSILGACS 146 (727)
Q Consensus 69 ~E~LlStai~GiifslfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~--WVgiWta~~l~llai~nas~ 146 (727)
+-+.++++++-++.++++.-|.-+-=.-|- -..+-|..+...+ ++|.. =.++|.+++-++++.++.=.
T Consensus 56 ~AT~l~a~~gs~~mgl~An~P~alapgmgl---nAfFaftvv~~~g-------i~wq~AL~aVF~sGiif~ils~t~iR~ 125 (436)
T COG2252 56 VATCLAAAIGSIAMGLYANLPIALAPGMGL---NAFFAFTVVLGMG-------LSWQVALGAVFLSGIIFLLLSLTGIRE 125 (436)
T ss_pred HHHHHHHHHHHHHHHHHHcCchhhcchhhH---HHHHHHHHHHhcC-------CcHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 457778888899999999999877554443 3335566776654 34443 36789999999999999865
Q ss_pred c-ceecccc
Q 004855 147 I-INRFTRV 154 (727)
Q Consensus 147 l-i~~~TRf 154 (727)
+ +|.+.+-
T Consensus 126 ~ii~~IP~~ 134 (436)
T COG2252 126 WIINAIPRS 134 (436)
T ss_pred HHHHhCcHH
Confidence 5 5666653
No 19
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=72.54 E-value=1.4e+02 Score=34.20 Aligned_cols=93 Identities=17% Similarity=0.205 Sum_probs=52.8
Q ss_pred hHHHHHhhhhhhHHHHhhcCcceeeeccCchHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHHHHhcccc-
Q 004855 68 AVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWVCVWTALLLLMLSILGACS- 146 (727)
Q Consensus 68 v~E~LlStai~GiifslfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WVgiWta~~l~llai~nas~- 146 (727)
+.-..++.++++++.|+.--.|... +.+-|-..+.. .... + . .+ +-..=..+-++++.+++...+.-+
T Consensus 60 l~a~~~~~Gl~ti~lS~~~r~Pi~~-awStPGaAll~----~~~~-~-~---~~-~eavGAfiv~g~lilllGltG~f~r 128 (395)
T TIGR00843 60 ITAIGIAAAVSGIFLSIRFKTPVLT-AWSAPGAALLV----TGFP-G-I---SL-NEAIAAFITAAALIFLCGITGLFAK 128 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCeee-ecCchHHHHHH----HhcC-C-C---CH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445678999999999999999865 44555443221 1111 0 0 11 111114556677777777777644
Q ss_pred cceecccchhhHHHHHHHHHHHHHHHHH
Q 004855 147 IINRFTRVAGELFGLLIAMLFMQQAIKG 174 (727)
Q Consensus 147 li~~~TRft~EiFg~LIsvIFI~eaik~ 174 (727)
+++++. ..-.-+++-++.+-+ +.+.
T Consensus 129 l~~~IP--~~Va~amLAGIlL~f-~l~~ 153 (395)
T TIGR00843 129 LLKIIP--HGIAAAMLAGILFQF-GLGA 153 (395)
T ss_pred HHHHCC--HHHHHHHHHHHHHHH-HHHH
Confidence 566666 344556665554444 5443
No 20
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=48.14 E-value=4.7e+02 Score=30.01 Aligned_cols=210 Identities=13% Similarity=0.192 Sum_probs=106.0
Q ss_pred HHHhhhhhhHHHHhhcCcceeeeccCchHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHHHHhccc-ccce
Q 004855 71 TLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWVCVWTALLLLMLSILGAC-SIIN 149 (727)
Q Consensus 71 ~LlStai~GiifslfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WVgiWta~~l~llai~nas-~li~ 149 (727)
.-+..+++++..|+.--||..+-=+|=...+..+.+- +.. |=+- .=..+-++++.+++.+++.- ++++
T Consensus 47 l~~~~Gl~~i~lSl~yR~Pi~~AWStPGaAlL~~~~~----~~~------~~ea-vGAfl~~~~Li~l~G~tg~~~rl~~ 115 (378)
T PF03594_consen 47 LYLGMGLTSILLSLRYRMPIVTAWSTPGAALLATSLP----GYS------FAEA-VGAFLVAGALILLLGVTGLFGRLMR 115 (378)
T ss_pred HHHHHHHHHHHHHHHHcCCchhhcchHHHHHHHHhcc----CCC------HHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457789999999999999976655544554333221 110 1111 11334567777777777763 4566
Q ss_pred ecccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCccccccccccchhHHHHHHHHHHHHHHHHhhccccccccccc
Q 004855 150 RFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIPSWRFANGMFALVLSFGLLYTGLKSRKARSWRYGTG 229 (727)
Q Consensus 150 ~~TRft~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~~~~~~~~~~llsliL~~gt~~~a~~lr~~r~s~y~~~ 229 (727)
|+. .+|=..+.+=+++.-+++..... + ++| ++ ...++.+++.+ | |+.++
T Consensus 116 ~IP---~~ia~AMLAGvLl~f~l~~f~a~-~----~~P--------------~l-~~~ml~~~l~~---~-----r~~pr 164 (378)
T PF03594_consen 116 RIP---PPIASAMLAGVLLPFGLAAFTAL-Q----ADP--------------LL-VGPMLAVFLLA---R-----RFSPR 164 (378)
T ss_pred HCC---HHHHHHHHHHHHHHHHHHHHHHH-H----hHH--------------HH-HHHHHHHHHHH---H-----HHcch
Confidence 665 55555555544444454433211 0 011 11 12222222221 1 22232
Q ss_pred ccchhhcchhhhHHHHHHhhhccccCcccC-CCCccccCCCCCCCCCCCCCceEeccCCCchHHHHHHHHHHHHHHHHHH
Q 004855 230 WLRSVIADYGVPLMVVVWTGVSYIPSGDVP-KGIPRRLFSPNPWSPGAYENWTVIKDMLNVPIVYIIGAFIPATMIAVLY 308 (727)
Q Consensus 230 ~vR~~IaDygvpiaVlv~t~vsy~~~~~vP-~g~~~rl~~p~p~~p~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~ 308 (727)
|+++.+.++-.++.+..+ ++. ... ++... .-.|+ .|.+..-+-+--|+-++++-
T Consensus 165 --------~av~~al~~g~~~a~~~g-~~~~~~~--------~~~~~-~p~~~-------~P~Fs~~a~v~lalPL~ivt 219 (378)
T PF03594_consen 165 --------YAVLAALVAGVAVAALTG-QLHPSAL--------QLSLA-HPVFT-------TPEFSWSALVSLALPLFIVT 219 (378)
T ss_pred --------hHHHHHHHHHHHHHHhcC-CCCcccc--------ccccc-eeEEE-------CCcccHHHHHHHHHHHHHHH
Confidence 457777777666665443 111 111 11000 01132 22222223333456666666
Q ss_pred HHhhhhHHHHhhcccccCCCCCCccch----hHHHHHHhhhhhhcCCCCC
Q 004855 309 YFDHSVASQLAQQKEFNLRKPSSYHYD----LLLLGFLTLLCGLIGIPPS 354 (727)
Q Consensus 309 F~DhnIss~iaq~ke~kLkKpsgyH~D----LlllGi~t~icgllGLP~~ 354 (727)
.--||+...-+-| -.|||-+ +.+-|+.+++.+.||--..
T Consensus 220 masQnlpG~aVL~-------a~GY~~p~~~~~~~tGl~s~l~ApfGg~~~ 262 (378)
T PF03594_consen 220 MASQNLPGIAVLR-------AAGYQPPVNPLITVTGLASLLAAPFGGHAV 262 (378)
T ss_pred HHhcchHHHHHHH-------HcCCCCCchHHHHHHHHHHHHHhhhchhhh
Confidence 6778888666643 3455543 4567888888888886543
No 21
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=41.64 E-value=66 Score=36.74 Aligned_cols=101 Identities=12% Similarity=0.203 Sum_probs=72.7
Q ss_pred chhHHHHHhhhhhhHHHHhhcCcceeeeccCchHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHHHHhccc
Q 004855 66 LTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWVCVWTALLLLMLSILGAC 145 (727)
Q Consensus 66 lgv~E~LlStai~GiifslfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WVgiWta~~l~llai~nas 145 (727)
.-+.+.+.++.++.++-+.|||-+.++-+.|.- +|...+ ++++ ..=|.|.+++++++.++++.+.+
T Consensus 254 ~p~~~~~~~tGl~sll~ApfGg~~~nlaaitaA----------ic~G~~--ah~d-~~rR~~a~i~~Gv~yll~glfag- 319 (395)
T TIGR00843 254 APAKPIIAAAGLAALFAAFAGGISIGIAAITAA----------ICMGKD--AHED-KDKRWIAAAAAGIFYLLAGLFAG- 319 (395)
T ss_pred CCchHHHHHHHHHHHHHhccCCchhhhhHHhHH----------HhcCcc--cccC-cCccchHHHHHHHHHHHHHHHHH-
Confidence 457999999999999999999999888775442 454432 1222 45567789999999999999976
Q ss_pred ccceecccchhhHHHHHHHHHHHHHHHHHHhhhcc
Q 004855 146 SIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFR 180 (727)
Q Consensus 146 ~li~~~TRft~EiFg~LIsvIFI~eaik~lv~~F~ 180 (727)
.+..-+.-+..|+-..+-++-.+--=...+..-|+
T Consensus 320 ~i~~l~~~~P~~li~~laGlAll~~~~~~l~~a~~ 354 (395)
T TIGR00843 320 AITALFAALPKELIAALAGLALLGAIAGNIKIALH 354 (395)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66777777888888887777544332334444454
No 22
>KOG1281 consensus Na+/dicarboxylate, Na+/tricarboxylate and phosphate transporters [Inorganic ion transport and metabolism]
Probab=38.27 E-value=5.1e+02 Score=31.40 Aligned_cols=54 Identities=22% Similarity=0.177 Sum_probs=37.1
Q ss_pred HHhhhhhhHHHHhhcCcceeeeccCchHHHHHHHHHHHHHhhhccccchhhHHHHHH
Q 004855 72 LASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWV 128 (727)
Q Consensus 72 LlStai~GiifslfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WV 128 (727)
+..+..=|+.||-..|-=++|-| |+|=+|+-+.+...--... ...+|.+|.+..
T Consensus 232 ~~~g~~L~ia~Sa~igg~~titG-T~pnlVll~~~~~~fp~s~--~~~Nf~swl~Fs 285 (586)
T KOG1281|consen 232 LLKGFTLGIAYSAYIGGTLTITG-TAPNLVLLGNMNVRFPLSM--WVSNFASWLFFS 285 (586)
T ss_pred HHHHHHHHHHHHHhhcchhhhcC-CCccHHHHHHHHHhccccc--cccchHHHHHHh
Confidence 55667778999999999999999 8998887665554332221 124677765543
No 23
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=30.45 E-value=85 Score=35.73 Aligned_cols=90 Identities=11% Similarity=0.243 Sum_probs=67.7
Q ss_pred cchhHHHHHhhhhhhHHHHhhcCcceeeeccCchHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHHHHhcc
Q 004855 65 VLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFIAWSGWVCVWTALLLLMLSILGA 144 (727)
Q Consensus 65 ~lgv~E~LlStai~GiifslfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL~~~~WVgiWta~~l~llai~na 144 (727)
+--+...+..|.+..++.+.|||.+.++-+.|. .+|.+.+- ++++ .=|-+.++|++++-++++.+.+
T Consensus 237 ~~p~~~~~~~tGl~s~l~ApfGg~~~nlAaita----------AIc~g~ea-h~dp--~rRy~Aav~~Gv~yll~Gl~a~ 303 (378)
T PF03594_consen 237 QPPVNPLITVTGLASLLAAPFGGHAVNLAAITA----------AICAGPEA-HPDP--SRRYIAAVAAGVFYLLFGLFAA 303 (378)
T ss_pred CCCchHHHHHHHHHHHHHhhhchhhhHHHHHHH----------HHHcCCcc-CCCc--ccchHHHHHHhHHHHHHHHHHH
Confidence 445678999999999999999999999877544 37776431 1111 2234589999999999888876
Q ss_pred cccceecccchhhHHHHHHHHHHH
Q 004855 145 CSIINRFTRVAGELFGLLIAMLFM 168 (727)
Q Consensus 145 s~li~~~TRft~EiFg~LIsvIFI 168 (727)
.++..++.+..|.-..+-++-.+
T Consensus 304 -~~v~l~~~lP~~li~~lAGLALl 326 (378)
T PF03594_consen 304 -ALVALFAALPPALIAALAGLALL 326 (378)
T ss_pred -HHHHHHHhCCHHHHHHHHHHHHH
Confidence 56788888999998888777544
No 24
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=28.92 E-value=2.2e+02 Score=33.53 Aligned_cols=92 Identities=20% Similarity=0.216 Sum_probs=58.4
Q ss_pred HHHhhhhhHHHHhhccchhccCcchhHHHHHhhhhhhHHHHhhcCcceeeeccCchHHHHHHHHHHHHHhhhccccchhh
Q 004855 43 IFFASAIPVISFGEQLERDTEGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERADLGRNLFI 122 (727)
Q Consensus 43 ifFA~llPaIaFG~ll~~~T~g~lgv~E~LlStai~GiifslfgGQPL~IlGvTGP~~if~~~ly~f~~~~~~lg~~~fL 122 (727)
+.+.+.+=.++-+.-++++++..+...+-+++++++.++-|+|||=|-+ |..+-+.+ -++ +-.
T Consensus 268 ia~v~~~e~l~~a~~~~~~~~~~~d~n~El~a~G~~N~~~~~fg~~p~~--~s~srs~~----~~~-~G~---------- 330 (563)
T TIGR00815 268 IAIVGLIESIAIARSFARMTGYKIDANQELVAQGIANIVGSFFSCYPAT--GSLSRTAV----NAK-AGC---------- 330 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHhhHHHHHHHHhCccCCC--CcchHHHH----HHh-cCC----------
Confidence 3344444444444444555677788999999999999999999998864 22222221 111 111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccceeccc
Q 004855 123 AWSGWVCVWTALLLLMLSILGACSIINRFTR 153 (727)
Q Consensus 123 ~~~~WVgiWta~~l~llai~nas~li~~~TR 153 (727)
-.-|.++++++++++...+. ..++.|+.+
T Consensus 331 -~t~~a~i~~~~~~l~~~l~~-~~~l~~iP~ 359 (563)
T TIGR00815 331 -RTQLSGVVTAIVVLLVLLVL-TPLFYYIPQ 359 (563)
T ss_pred -cchHHHHHHHHHHHHHHHHH-HHHHHhChH
Confidence 12368888888887776664 467888874
No 25
>PF10337 DUF2422: Protein of unknown function (DUF2422); InterPro: IPR018823 This domain is found in proteins conserved in fungi. Their function is not known. This entry represents the N-terminal half of some member proteins which contain IPR018820 from INTERPRO at their C terminus.
Probab=23.45 E-value=2.2e+02 Score=32.66 Aligned_cols=15 Identities=33% Similarity=0.939 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHH
Q 004855 123 AWSGWVCVWTALLLL 137 (727)
Q Consensus 123 ~~~~WVgiWta~~l~ 137 (727)
-+++|+..|.+++++
T Consensus 19 ~~k~~i~~~i~~~l~ 33 (459)
T PF10337_consen 19 MFKCWIAPWIALILC 33 (459)
T ss_pred HHHHHHHHHHHHHHH
Confidence 467888888887776
No 26
>PRK11383 hypothetical protein; Provisional
Probab=22.26 E-value=3.9e+02 Score=26.80 Aligned_cols=78 Identities=21% Similarity=0.332 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccce----ecccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCccccccccccch
Q 004855 124 WSGWVCVWTALLLLMLSILGACSIIN----RFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPERENPKLVQFIPSWRFA 199 (727)
Q Consensus 124 ~~~WVgiWta~~l~llai~nas~li~----~~TRft~EiFg~LIsvIFI~eaik~lv~~F~~p~~~~~~~~~~~~~~~~~ 199 (727)
..+|+.+-+++.++++...|||-..+ |++ .=++|++-++ ++|+-++.-. ++ .|..+ --+.
T Consensus 14 ~~sw~al~~g~~~y~iGLwnA~~~LsEKGyY~~---vl~lglF~av-----s~QK~vRD~~--eg-i~vt~-----~f~~ 77 (145)
T PRK11383 14 IVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFA---VLVLGLFSAA-----SYQKTVRDKY--EG-IPTTS-----IYYM 77 (145)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCcccHHHH---HHHHHHHHHH-----HHHHHHhhcc--cC-CChhH-----HHHH
Confidence 35799999999999999999996654 233 2344444443 4444444211 01 11111 1233
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 004855 200 NGMFALVLSFGLLYTGLK 217 (727)
Q Consensus 200 ~~llsliL~~gt~~~a~~ 217 (727)
...++++++++++.++++
T Consensus 78 ~cw~a~l~~i~LL~iGLw 95 (145)
T PRK11383 78 TCLTVFIISVALLMVGLW 95 (145)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 456788889998888865
No 27
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.00 E-value=75 Score=36.07 Aligned_cols=66 Identities=32% Similarity=0.430 Sum_probs=42.5
Q ss_pred cchhhHHHHHHHHHHhhheeeechhhHhhHHHHHHHH------HHHhhhh-----cCCCCChhhhcccCcccccccCCCC
Q 004855 560 KTIAMFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLL------VPARQYI-----LPKFFKGVHLQDLDAAEYEEAPALP 628 (727)
Q Consensus 560 ~~IhlFT~iQl~~l~~~f~vt~~~~aai~FPl~i~lL------IpiR~~l-----LPk~F~~~eL~~LD~~e~ee~~~~~ 628 (727)
..|.++|+ |++.+...|.=.|+|-++++ .+|++| -|||.+- +-|.|++---+.|..+||||-..+-
T Consensus 253 ~~ilmWtL-qli~lvl~Yfsvq~p~~a~A--~iI~~lc~~~l~~pIrw~~~~~~kv~r~fkpl~rRlLtEeEYeeQaeve 329 (452)
T KOG3817|consen 253 QTILMWTL-QLIGLVLAYFSVQHPSAAIA--AIIMVLCFVALYFPIRWTNQIKFKVRRRFKPLKRRLLTEEEYEEQAEVE 329 (452)
T ss_pred hhHHHHHH-HHHHHHHHHHhcccHHHHHH--HHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhhcCHHHHHHHHHHH
Confidence 56777774 88888777776777766553 233333 3666442 3455777777888888888855443
Done!