BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004856
(727 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/681 (33%), Positives = 388/681 (56%), Gaps = 8/681 (1%)
Query: 38 LLNLCENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSL 97
LL C + + L+QI + +GL+Q + L+ + G + + +VF I S ++
Sbjct: 43 LLERCSSLKELRQI-LPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNV 101
Query: 98 LYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQV 157
LY T+LK +K + +K L + +M + P + ++++ C + G++IH +
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 158 VKLGF--DSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSE 215
VK GF D F G L Y KC E K + +DL S WN++++ QNG +
Sbjct: 162 VKSGFSLDLFAMTG--LENMYAKCRQVNEARKVFDRMPERDLVS-WNTIVAGYSQNGMAR 218
Query: 216 KSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALL 275
+ E+ K M E + T++++L + L+ + +G+ +H A+ S F ++++TAL+
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 276 SMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLF 335
MY+K SLE A+ LFD M +++ V WN MI AY Q+ PKE++ + M+ G +
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 336 TAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSV 395
+ + A+ + + + ++E G+ +H + G D VSV NSLI MYC+C++++ A +F +
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 396 KTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVK 455
+++T+VSW++MI G+ + + ++AL FS+M+ V+ D T ++++ A + H K
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 456 YLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAK 515
++HG M+ L+ V TA+ YAKCG I +A +FD + + + TWN+MI Y
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFD--MMSERHVTTWNAMIDGYGT 516
Query: 516 HGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQE 575
HG +L+ +M++ ++P+ +TFL +++AC ++GLVE G F MKE+Y E S +
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 576 HYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISM 635
HY +MV+LLGRAG ++EA + + MP KP V+G +L AC++H AE AE+L +
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 636 EPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQS 695
P++ G +VLL+NIY AA W V ++R + +GL+KTPGCS +EI VH F++ +
Sbjct: 637 NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTA 696
Query: 696 HPQADAIYTILGILELEIMEG 716
HP + IY L L I E
Sbjct: 697 HPDSKKIYAFLEKLICHIKEA 717
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/687 (34%), Positives = 384/687 (55%), Gaps = 16/687 (2%)
Query: 37 SLLNLCENPQHLQQIHA--RYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSP 94
S+L LC + + L+ +I +G + L S L Y N G L + +VF+ +
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE 158
Query: 95 NSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIH 154
+L + ++ L+K G++ ++ ++K+M + T+ V +S S L GE++H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 218
Query: 155 AQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRK-FKDLKSR----WNSLISLAV 209
++K GF + VG++LV FY+K N++ RK F ++ R WNS+I+ V
Sbjct: 219 GFILKSGFGERNSVGNSLVAFYLK------NQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 210 QNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLS 269
NG +EK +F M + G E D T++++ + + + LGR VH + V + F ++
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 270 VNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSG 329
LL MYSK L+ AK +F +MSD+ V + MI+ Y + G E+++L M G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 330 FRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCAR 389
D++T A ++ + + ++ GK++H + N + + V N+L+DMY +C + A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 390 KIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEG-VEVDFVTIINILPACVNI 448
+F ++ K ++SW+++I GY + + EAL LF+ + E D T+ +LPAC ++
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 449 GALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNS 508
A + + +HGY M+ G S V ++ YAKCG + +A LFD+ I SKD+++W
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD--IASKDLVSWTV 570
Query: 509 MISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESY 568
MI+ Y HG + L+ QM+Q+ + D I+F+ LL AC ++GLV+EG F M+
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 569 GYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELT 628
EP+ EHYA +V++L R G + +A +++MP PDA +WG LL C++H + +LAE
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 629 AEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHE 688
AEK+ +EPEN G YVL++NIYA A KW V ++R + RGL+K PGCSWIEI V+
Sbjct: 691 AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNI 750
Query: 689 FWAADQSHPQADAIYTILGILELEIME 715
F A D S+P+ + I L + ++E
Sbjct: 751 FVAGDSSNPETENIEAFLRKVRARMIE 777
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 214/396 (54%), Gaps = 7/396 (1%)
Query: 222 KLMRMEGA-EFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSK 280
KL+ + G + D TL ++L+ + KSL+ G+ V + F D ++ + L MY+
Sbjct: 82 KLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTN 141
Query: 281 LASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAA 340
L++A +FD++ + + WNI+++ +SG S+ L M+ SG D +T
Sbjct: 142 CGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV 201
Query: 341 VSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTV 400
S S+++++ G+Q+H +L++G + SV NSL+ Y + + ++ ARK+FD + + V
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 401 VSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGY 460
+SW+S+I GYV++ + + L +F +M + G+E+D TI+++ C + + + +H
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 461 SMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWS 520
+K + + Y+KCG ++ A +F E + + ++++ SMI+ YA+ G
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFRE--MSDRSVVSYTSMIAGYAREGLAG 379
Query: 521 QCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKES-YGYEPSQEHYAS 579
+ KL+ +M++ + PD+ T +L C L++EG+ + + +KE+ G++ + +
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--A 437
Query: 580 MVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSA 615
++++ + G M EA + +M K D W ++
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGG 472
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 251/709 (35%), Positives = 385/709 (54%), Gaps = 81/709 (11%)
Query: 10 SLQSGHVKFLRFPANQTRPHMTATH--SFSLLNLCENPQHLQQIHARYIILHGLHQNLIL 67
++ S F P++ P+ + + S SLL+ C+ Q L+ IHA+ I + GLH
Sbjct: 9 TVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKI-GLHNTNYA 67
Query: 68 SSNLIDS---YANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMAL 124
S LI+ + L + VF +I PN L++ T+ + + + L +Y M
Sbjct: 68 LSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127
Query: 125 QSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFE 184
+ P T+PFV++SC+ F G++IH V+KLG D ++ Y+
Sbjct: 128 LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCD---------LDLYVH------ 172
Query: 185 NEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTV 244
SLIS+ VQNG+ E + ++F
Sbjct: 173 -----------------TSLISMYVQNGRLEDAHKVFD---------------------- 193
Query: 245 ELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNI 304
KS +D+ TAL+ Y+ +E+A+ LFD++ KD V WN
Sbjct: 194 --KSPH---------------RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNA 236
Query: 305 MISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNG 364
MIS Y ++G KE+LEL M+++ R D T + VS+ + +IE G+Q+H + +G
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG 296
Query: 365 SDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFS 424
+ + N+LID+Y +C +L A +F+ + K V+SW+++I GY + EAL LF
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 356
Query: 425 EMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKL--GLNSLSSVNTAIFISYAK 482
EM G + VT+++ILPAC ++GA++ +++H Y K G+ + SS+ T++ YAK
Sbjct: 357 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK 416
Query: 483 CGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFL 542
CG IE A ++F+ I K + +WN+MI +A HG F L+++M++ ++PD ITF+
Sbjct: 417 CGDIEAAHQVFNS--ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFV 474
Query: 543 GLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPF 602
GLL+AC ++G+++ GR IF+ M + Y P EHY M++LLG +G EA E++ M
Sbjct: 475 GLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEM 534
Query: 603 KPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKM 662
+PD +W LL ACKMH EL E AE LI +EPEN G+YVLLSNIYA+AG+WN VAK
Sbjct: 535 EPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKT 594
Query: 663 RTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILEL 711
R L D+G+KK PGCS IEI +VHEF D+ HP+ IY +L +E+
Sbjct: 595 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 643
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/659 (33%), Positives = 369/659 (55%), Gaps = 5/659 (0%)
Query: 60 GLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVY 119
G+ N ++S+LI +Y G + + ++F+ + + +++ +L +K G + + +
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 120 KQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKC 179
M + + P T+ V+ C+ L G ++H VV G D + ++L+ Y KC
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 180 DGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINL 239
G F++ + + + WN +IS VQ+G E+S F M G D+ T +L
Sbjct: 288 -GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 240 LRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDR 299
L S + ++LE + +HC + D+ + +AL+ Y K + A+ +F + + D
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 300 VVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHAN 359
VV+ MIS Y +G +SLE+ +V+ + T ++ + I + ++ G+++H
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 360 VLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEA 419
+++ G D + ++ ++IDMY +C +N A +IF+ + + +VSW+SMI D A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 420 LRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFIS 479
+ +F +M + G+ D V+I L AC N+ + K +HG+ +K L S + +
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 480 YAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQM-KQSDVRPDL 538
YAKCG ++ A +F K K+I++WNS+I+A HG L+ +M ++S +RPD
Sbjct: 587 YAKCGNLKAAMNVFKTMK--EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 539 ITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVK 598
ITFL ++++C + G V+EG F+ M E YG +P QEHYA +V+L GRAG + EA E VK
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVK 704
Query: 599 DMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNG 658
MPF PDA VWG LL AC++H ELAE+ + KL+ ++P N+G YVL+SN +A A +W
Sbjct: 705 SMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWES 764
Query: 659 VAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILELEI-MEG 716
V K+R+ +++R ++K PG SWIEI K H F + D +HP++ IY++L L E+ +EG
Sbjct: 765 VTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEG 823
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 168/644 (26%), Positives = 320/644 (49%), Gaps = 16/644 (2%)
Query: 38 LLNLCENPQHLQQ---IHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSP 94
LL C NP L+Q +HA ++I++ + + ++ YA G S ++F +
Sbjct: 41 LLQACSNPNLLRQGKQVHA-FLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 95 NSLL--YGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEK 152
S + + +I+ + + G + L Y +M + P T+P ++++C L +F +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 153 IHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNG 212
+ V LG D + V +L++ Y++ G + + R + WN +++ + G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLE-YGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 213 KSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNT 272
+ + F +MRM+ ++ T +L ++LG +H + VVS + S+
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 273 ALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRA 332
+LLSMYSK +DA LF MS D V WN MIS Y QSG +ESL M+ SG
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 333 DLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIF 392
D T + + S+S +N+E+ KQ+H ++R+ + + ++LID Y +C ++ A+ IF
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 393 DSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALE 452
+ VV +++MI GY+ + +++L +F + + + +T+++ILP + AL+
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 453 HVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISA 512
+ LHG+ +K G ++ ++ A+ YAKCG + +A E+F E++ +DI++WNSMI+
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIF--ERLSKRDIVSWNSMITR 516
Query: 513 YAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEM-KESYGYE 571
A+ + S ++ QM S + D ++ L+AC N G+ I M K S +
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD 576
Query: 572 PSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEK 631
E ++++++ + G++ A + K M K + W +++AC H + + + +
Sbjct: 577 VYSE--STLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHGKLKDSLCLFHE 633
Query: 632 LI---SMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLK 672
++ + P+ ++S+ GV R+ D G++
Sbjct: 634 MVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQ 677
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 227/475 (47%), Gaps = 17/475 (3%)
Query: 50 QIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKF 109
Q+H +++ G+ + ++L+ Y+ G + ++F ++ +++ + ++ +
Sbjct: 260 QLHG-LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS 318
Query: 110 GEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVK--LGFDSFDD 167
G E++L + +M + P T+ ++ S S + ++IH +++ + D F
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIF-- 376
Query: 168 VGDALVEFYIKCDGGFENEKGMIQRKFKDLKS----RWNSLISLAVQNGKSEKSFELFKL 223
+ AL++ Y KC G M Q F S + ++IS + NG S E+F+
Sbjct: 377 LTSALIDAYFKCRG-----VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRW 431
Query: 224 MRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLAS 283
+ + TL+++L L +L+LGR +H + F ++ A++ MY+K
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGR 491
Query: 284 LEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSS 343
+ A +F+++S +D V WN MI+ QS P ++++ M SG D + AA+S+
Sbjct: 492 MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSA 551
Query: 344 ISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSW 403
+ + + +GK +H ++++ V ++LIDMY +C +L A +F ++K K +VSW
Sbjct: 552 CANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSW 611
Query: 404 SSMIKGYVTHDQSLEALRLFSEM-KLEGVEVDFVTIINILPACVNIGAL-EHVKYLHGYS 461
+S+I H + ++L LF EM + G+ D +T + I+ +C ++G + E V++ +
Sbjct: 612 NSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMT 671
Query: 462 MKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKH 516
G+ + + + G + A E D W +++ A H
Sbjct: 672 EDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPF-PPDAGVWGTLLGACRLH 725
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 170/339 (50%), Gaps = 4/339 (1%)
Query: 43 ENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTI 102
EN ++ +QIH YI+ H + ++ L+S LID+Y +S++Q +F+ S + +++ +
Sbjct: 354 ENLEYCKQIHC-YIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412
Query: 103 LKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGF 162
+ G Y +L +++ + + P E T ++ LL G ++H ++K GF
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 472
Query: 163 DSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFK 222
D+ ++G A+++ Y KC G + +R K WNS+I+ Q+ + ++F+
Sbjct: 473 DNRCNIGCAVIDMYAKC-GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531
Query: 223 LMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLA 282
M + G +D ++ L + L S G+ +H + D+ + L+ MY+K
Sbjct: 532 QMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG 591
Query: 283 SLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMV-RSGFRADLFTAIAAV 341
+L+ A +F M +K+ V WN +I+A G K+SL L MV +SG R D T + +
Sbjct: 592 NLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEII 651
Query: 342 SSISTMKNIEWGKQMHANVLRN-GSDYQVSVHNSLIDMY 379
SS + +++ G + ++ + G Q + ++D++
Sbjct: 652 SSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLF 690
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/678 (31%), Positives = 375/678 (55%), Gaps = 8/678 (1%)
Query: 30 MTATHSFS-LLNLCENPQHLQ---QIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQ 85
M ++FS +L+ C+ + L+ Q+H + L G + + + L+ Y +LG L ++
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 86 QVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLL 145
+F++++ +++ Y T++ LS+ G EK + ++K+M L + P +T ++ +CS
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 146 DFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLI 205
G+++HA KLGF S + + AL+ Y KC ++ + +++ WN ++
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV-VLWNVML 462
Query: 206 SLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFC 265
SF +F+ M++E + T ++L++ + L LELG +H + ++F
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522
Query: 266 KDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCM 325
+ V + L+ MY+KL L+ A + + + KD V W MI+ Y Q F ++L M
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Query: 326 VRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDL 385
+ G R+D AVS+ + ++ ++ G+Q+HA +G + N+L+ +Y C +
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 642
Query: 386 NCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPAC 445
+ F+ + ++W++++ G+ + EALR+F M EG++ + T + + A
Sbjct: 643 EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 702
Query: 446 VNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIIT 505
++ K +H K G +S + V A+ YAKCG I A + F E + +K+ ++
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE--VSTKNEVS 760
Query: 506 WNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMK 565
WN++I+AY+KHG S+ + QM S+VRP+ +T +G+L+AC + GLV++G F+ M
Sbjct: 761 WNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMN 820
Query: 566 ESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELA 625
YG P EHY +V++L RAG + A+E +++MP KPDA VW LLSAC +H E+
Sbjct: 821 SEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIG 880
Query: 626 ELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKL 685
E A L+ +EPE++ YVLLSN+YA + KW+ R ++++G+KK PG SWIE+
Sbjct: 881 EFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNS 940
Query: 686 VHEFWAADQSHPQADAIY 703
+H F+ DQ+HP AD I+
Sbjct: 941 IHSFYVGDQNHPLADEIH 958
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 151/616 (24%), Positives = 288/616 (46%), Gaps = 20/616 (3%)
Query: 49 QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSK 108
+++H++ + L GL N LS L D Y G L + +VF+ + + ++K L+
Sbjct: 105 RKLHSQILKL-GLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163
Query: 109 FGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSC---SCLLDFISGEKIHAQVVKLGFDSF 165
+ ++ +M +++ P E T+ V+ +C S D + E+IHA+++ G
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV--EQIHARILYQGLRDS 221
Query: 166 DDVGDALVEFYIKCDGGFENEKGMIQRKFKDLK----SRWNSLISLAVQNGKSEKSFELF 221
V + L++ Y + GF + + +R F L+ S W ++IS +N ++ LF
Sbjct: 222 TVVCNPLIDLYSR--NGFVD---LARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 222 KLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKL 281
M + G ++L + +++SLE+G +H + + F D V AL+S+Y L
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336
Query: 282 ASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAV 341
+L A+ +F MS +D V +N +I+ Q G+ ++++EL M G D T + V
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 342 SSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVV 401
+ S + G+Q+HA + G + +L+++Y +C D+ A F + + VV
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 402 SWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYS 461
W+ M+ Y D + R+F +M++E + + T +IL C+ +G LE + +H
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 462 MKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQ 521
+K + V + + YAK G ++ A ++ + KD+++W +MI+ Y ++ +
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI--RFAGKDVVSWTTMIAGYTQYNFDDK 574
Query: 522 CFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMV 581
+ QM +R D + ++AC ++EG+ I + S G+ ++V
Sbjct: 575 ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALV 633
Query: 582 NLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAG 641
L R G ++E+ L + D W L+S + E A L ++ E +
Sbjct: 634 TLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNNEEA-LRVFVRMNREGIDNN 691
Query: 642 NYVLLSNIYAAAGKWN 657
N+ S + AA+ N
Sbjct: 692 NFTFGSAVKAASETAN 707
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 143/602 (23%), Positives = 280/602 (46%), Gaps = 44/602 (7%)
Query: 43 ENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTI 102
E P L+ + + +I +HG+ + L ++ VF ++ + I
Sbjct: 15 EEPMFLRSVSSSFIFIHGVPRKL-----------------KTRTVFPTLCGTRRASFAAI 57
Query: 103 LKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSC---SCLLDFISGEKIHAQVVK 159
+S+ +++ + + + + P T +++ C + LD G K+H+Q++K
Sbjct: 58 SVYISEDESFQEKRI--DSVENRGIRPNHQTLKWLLEGCLKTNGSLD--EGRKLHSQILK 113
Query: 160 LGFDSFDDVGDALVEFYI-KCD--GGFENEKGMIQRKFKDLKSRWNSLIS-LAVQNGKSE 215
LG DS + + L +FY+ K D G F+ M +R WN +I LA +N E
Sbjct: 114 LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTI----FTWNKMIKELASRNLIGE 169
Query: 216 KSFELFKLMRMEGAEFDSGTLINLLRS----TVELKSLELGRIVHCVAVVSDFCKDLSVN 271
F LF M E + GT +L + +V +E +H + V
Sbjct: 170 -VFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQ---IHARILYQGLRDSTVVC 225
Query: 272 TALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFR 331
L+ +YS+ ++ A+ +FD + KD W MIS ++ E++ L M G
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 332 ADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKI 391
+ + +S+ ++++E G+Q+H VL+ G V N+L+ +Y +L A I
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 392 FDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGAL 451
F ++ + V+++++I G +A+ LF M L+G+E D T+ +++ AC G L
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 452 EHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMIS 511
+ LH Y+ KLG S + + A+ YAKC IE A + F E +++ +++ WN M+
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE--NVVLWNVMLV 463
Query: 512 AYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYE 571
AY D F+++ QM+ ++ P+ T+ +L C+ G +E G I ++ ++ ++
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT-NFQ 522
Query: 572 PSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEK 631
+ + ++++ + G +D A +++ K D W +++ ++ + A T +
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 632 LI 633
++
Sbjct: 582 ML 583
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust.
Identities = 237/753 (31%), Positives = 391/753 (51%), Gaps = 61/753 (8%)
Query: 4 LLPPACSLQSGHVKFLRFPANQTRPHMTATHSFSLLNLCENPQHLQQIHARYIILHGLHQ 63
L+P A + ++K F + + P +T ++ C+ ++ IH + + L
Sbjct: 6 LIPNAAAKSHQYIKVSLF--STSAPEITP----PFIHKCKTISQVKLIHQKLLSFGILTL 59
Query: 64 NLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLY--GTILKNLSKFGEYEKTLLVYKQ 121
NL +S+LI +Y ++G LS + + ++ +Y +++++ G K L ++
Sbjct: 60 NL--TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGL 117
Query: 122 MALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDG 181
M S P T+PFV ++C + GE HA + GF S VG+ALV Y +C
Sbjct: 118 MHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 182 GFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRME-GAEFDSGTLINLL 240
+ K + D+ S WNS+I + GK + + E+F M E G D+ TL+N+L
Sbjct: 178 LSDARKVFDEMSVWDVVS-WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 241 RSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRV 300
L + LG+ +HC AV S+ +++ V L+ MY+K +++A +F MS KD V
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 301 VWNIM-----------------------------------ISAYYQSGFPKESLELLMCM 325
WN M IS Y Q G E+L + M
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 326 VRSGFRADLFTAIAAVSSISTMKNIEWGKQMHA-------NVLRNGSDYQVSVHNSLIDM 378
+ SG + + T I+ +S +++ + GK++H ++ +NG + V N LIDM
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDM 416
Query: 379 YCECEDLNCARKIFDSV--KTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEV--D 434
Y +C+ ++ AR +FDS+ K + VV+W+ MI GY H + +AL L SEM E + +
Sbjct: 417 YAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPN 476
Query: 435 FVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLS-SVNTAIFISYAKCGCIEMAGELF 493
TI L AC ++ AL K +H Y+++ N++ V+ + YAKCG I A +F
Sbjct: 477 AFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVF 536
Query: 494 DEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGL 553
D + +K+ +TW S+++ Y HG + ++ +M++ + D +T L +L AC ++G+
Sbjct: 537 DN--MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGM 594
Query: 554 VEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLL 613
+++G F MK +G P EHYA +V+LLGRAG ++ A L+++MP +P VW L
Sbjct: 595 IDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFL 654
Query: 614 SACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKK 673
S C++H + EL E AEK+ + + G+Y LLSN+YA AG+W V ++R+ +R +G+KK
Sbjct: 655 SCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKK 714
Query: 674 TPGCSWIEIGKLVHEFWAADQSHPQADAIYTIL 706
PGCSW+E K F+ D++HP A IY +L
Sbjct: 715 RPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/638 (33%), Positives = 355/638 (55%), Gaps = 11/638 (1%)
Query: 84 SQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSC 143
++Q+F +T + + T+LK+LS+ ++E+ L + M P T P +++C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 144 LLDFISGEKIHAQV---VKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR 200
L + GE IH V V LG D + VG +L+ YIKC E + + + D+ +
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLY--VGSSLIYMYIKCGRMIEALRMFDELEKPDIVT- 129
Query: 201 WNSLISLAVQNGKSEKSFELFKLMRMEG-AEFDSGTLINLLRSTVELKSLELGRIVHCVA 259
W+S++S +NG ++ E F+ M M D TLI L+ + +L + LGR VH
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 260 VVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESL 319
+ F DLS+ +LL+ Y+K + ++A LF +++KD + W+ +I+ Y Q+G E+L
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 320 ELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMY 379
+ M+ G ++ T + + + + ++E G++ H +R G + +V V +L+DMY
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 380 CECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEG-VEVDFVTI 438
+C A +F + K VVSW ++I G+ + + ++ FS M LE D + +
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 439 INILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKI 498
+ +L +C +G LE K H Y +K G +S + ++ Y++CG + A ++F+ I
Sbjct: 370 VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN--GI 427
Query: 499 DSKDIITWNSMISAYAKHGDWSQCFKLYTQM-KQSDVRPDLITFLGLLTACVNAGLVEEG 557
KD + W S+I+ Y HG ++ + + M K S+V+P+ +TFL +L+AC +AGL+ EG
Sbjct: 428 ALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 487
Query: 558 RIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACK 617
IFK M Y P+ EHYA +V+LLGR G +D A E+ K MPF P ++ G LL AC+
Sbjct: 488 LRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACR 547
Query: 618 MHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGC 677
+H E+AE A+KL +E +AG Y+L+SN+Y G+W V K+R ++ RG+KK
Sbjct: 548 IHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAE 607
Query: 678 SWIEIGKLVHEFWAADQSHPQADAIYTILGILELEIME 715
S IEI + VH F A D+ HP+ + +Y +L L+L + E
Sbjct: 608 SLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKE 645
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 171/341 (50%), Gaps = 12/341 (3%)
Query: 280 KLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIA 339
K +S DA+ +F +M+ + WN ++ + + +E L M R + D FT
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 340 AVSSISTMKNIEWGKQMHANVLRN---GSDYQVSVHNSLIDMYCECEDLNCARKIFDSVK 396
A+ + ++ + +G+ +H V ++ GSD V +SLI MY +C + A ++FD ++
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVG--SSLIYMYIKCGRMIEALRMFDELE 123
Query: 397 TKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEG-VEVDFVTIINILPACVNIGALEHVK 455
+V+WSSM+ G+ + +A+ F M + V D VT+I ++ AC + +
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 456 YLHGYSMKLGL-NSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYA 514
+HG+ ++ G N LS VN+ + YAK + A LF + I KD+I+W+++I+ Y
Sbjct: 184 CVHGFVIRRGFSNDLSLVNS-LLNCYAKSRAFKEAVNLF--KMIAEKDVISWSTVIACYV 240
Query: 515 KHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQ 574
++G ++ ++ M P++ T L +L AC A +E+GR E+ G E
Sbjct: 241 QNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEV 299
Query: 575 EHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSA 615
+ ++V++ + +EA + +P K D W L+S
Sbjct: 300 KVSTALVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISG 339
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 163/343 (47%), Gaps = 10/343 (2%)
Query: 55 YIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEK 114
++I G +L L ++L++ YA + +F I + + + T++ + G +
Sbjct: 188 FVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 115 TLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVE 174
LLV+ M P T V+++C+ D G K H ++ G ++ V ALV+
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 175 FYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRME-GAEFDS 233
Y+KC E + KD+ S W +LIS NG + +S E F +M +E D+
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVS-WVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 366
Query: 234 GTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDK 293
++ +L S EL LE + H + F + + +L+ +YS+ SL +A +F+
Sbjct: 367 ILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNG 426
Query: 294 MSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSG-FRADLFTAIAAVSSISTMKNIEW 352
++ KD VVW +I+ Y G ++LE MV+S + + T ++ +S+ S I
Sbjct: 427 IALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHE 486
Query: 353 GKQMHANVLRNGSDYQVSV----HNSLIDMYCECEDLNCARKI 391
G ++ ++ +DY+++ + L+D+ DL+ A +I
Sbjct: 487 GLRIFKLMV---NDYRLAPNLEHYAVLVDLLGRVGDLDTAIEI 526
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/601 (34%), Positives = 340/601 (56%), Gaps = 6/601 (0%)
Query: 114 KTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALV 173
++LL++++M P T+PFV ++C+ L D E +HA ++K F S VG A V
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 174 EFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDS 233
+ ++KC+ + + +R + + WN+++S Q+G ++K+F LF+ MR+ DS
Sbjct: 95 DMFVKCNS-VDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 234 GTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDK 293
T++ L++S KSL+L +H V + ++V +S Y K L+ AK++F+
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 294 MSDKDRVV--WNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIE 351
+ DR V WN M AY G ++ L M+R F+ DL T I +S + +
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLT 273
Query: 352 WGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYV 411
G+ +H++ + G+D + N+ I MY + ED AR +FD + ++T VSW+ MI GY
Sbjct: 274 QGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYA 333
Query: 412 THDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSS 471
EAL LF M G + D VT+++++ C G+LE K++ + G +
Sbjct: 334 EKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNV 393
Query: 472 -VNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMK 530
+ A+ Y+KCG I A ++FD K ++TW +MI+ YA +G + + KL+++M
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFDNTP--EKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 531 QSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHM 590
D +P+ ITFL +L AC ++G +E+G F MK+ Y P +HY+ MV+LLGR G +
Sbjct: 452 DLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKL 511
Query: 591 DEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIY 650
+EA EL+++M KPDA +WG LL+ACK+H ++AE AE L ++EP+ A YV ++NIY
Sbjct: 512 EEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIY 571
Query: 651 AAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILE 710
AAAG W+G A++R+ ++ R +KK PG S I++ H F + H + + IY L L
Sbjct: 572 AAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLS 631
Query: 711 L 711
L
Sbjct: 632 L 632
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 211/408 (51%), Gaps = 10/408 (2%)
Query: 201 WNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAV 260
WN I AV +S LF+ M+ G E ++ T + ++ L + +VH +
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 261 VSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLE 320
S F D+ V TA + M+ K S++ A +F++M ++D WN M+S + QSG ++
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 321 LLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYC 380
L M + D T + + S S K+++ + MHA +R G D QV+V N+ I Y
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 381 ECEDLNCARKIFDSVKT--KTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTI 438
+C DL+ A+ +F+++ +TVVSW+SM K Y ++ +A L+ M E + D T
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 439 INILPACVNIGALEHVKYLHGYSMKLGLNS-LSSVNTAIFIS-YAKCGCIEMAGELFDEE 496
IN+ +C N L + +H +++ LG + + ++NT FIS Y+K A LFD
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINT--FISMYSKSEDTCSARLLFD-- 315
Query: 497 KIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEE 556
+ S+ ++W MIS YA+ GD + L+ M +S +PDL+T L L++ C G +E
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 557 GRIIFKEMKESYGYEPSQEHYA-SMVNLLGRAGHMDEARELVKDMPFK 603
G+ I + YG + +++++ + G + EAR++ + P K
Sbjct: 376 GKWI-DARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK 422
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 157/355 (44%), Gaps = 19/355 (5%)
Query: 12 QSGHVKFLRFPANQTRPHMTATHSFSLLNLCENPQH------LQQIHARYIILHGLHQNL 65
QSGH + R + S +++ L ++ L+ +HA I L G+ +
Sbjct: 130 QSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRL-GVDVQV 188
Query: 66 ILSSNLIDSYANLGLLSLSQQVFNSITSPNSLL--YGTILKNLSKFGEYEKTLLVYKQMA 123
+++ I +Y G L ++ VF +I + + + ++ K S FGE +Y M
Sbjct: 189 TVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLML 248
Query: 124 LQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGF 183
+ P T+ + SC G IH+ + LG D + + + Y K +
Sbjct: 249 REEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE--- 305
Query: 184 ENEKGMIQRKFKDLKSR----WNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINL 239
+ + F + SR W +IS + G +++ LF M G + D TL++L
Sbjct: 306 --DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSL 363
Query: 240 LRSTVELKSLELGRIVHCVAVVSDFCKD-LSVNTALLSMYSKLASLEDAKMLFDKMSDKD 298
+ + SLE G+ + A + +D + + AL+ MYSK S+ +A+ +FD +K
Sbjct: 364 ISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT 423
Query: 299 RVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWG 353
V W MI+ Y +G E+L+L M+ ++ + T +A + + + ++E G
Sbjct: 424 VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 389 RKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNI 448
R+++ +V +W+ I+ V + +E+L LF EMK G E + T + AC +
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 449 GALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNS 508
+ + +H + +K S V TA + KC ++ A ++F E++ +D TWN+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVF--ERMPERDATTWNA 123
Query: 509 MISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLL 545
M+S + + G + F L+ +M+ +++ PD +T + L+
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI 160
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 230/680 (33%), Positives = 357/680 (52%), Gaps = 9/680 (1%)
Query: 47 HLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNL 106
HL Q HA+ IILHG ++ L + L ++LG + ++ +F S+ P+ L+ +++
Sbjct: 35 HLAQTHAQ-IILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGF 93
Query: 107 SKFGEYEKTLLVYKQMALQS-MYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSF 165
S +L V+ + + + P TY F I + S D +G IH Q V G DS
Sbjct: 94 SVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153
Query: 166 DDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFK-LM 224
+G +V+ Y K E+ + + R + WN++IS +N +S ++F+ L+
Sbjct: 154 LLLGSNIVKMYFKF-WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 212
Query: 225 RMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASL 284
D+ TL+++L + EL+ L LG +H +A + V T +S+YSK +
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 285 EDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSI 344
+ LF + D V +N MI Y +G + SL L ++ SG R + VS +
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR---LRSSTLVSLV 329
Query: 345 STMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWS 404
++ +H L++ SV +L +Y + ++ ARK+FD K++ SW+
Sbjct: 330 PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 405 SMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKL 464
+MI GY + + +A+ LF EM+ + VTI IL AC +GAL K++H
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 465 GLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFK 524
S V+TA+ YAKCG I A LFD + K+ +TWN+MIS Y HG +
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFD--LMTKKNEVTWNTMISGYGLHGQGQEALN 507
Query: 525 LYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLL 584
++ +M S + P +TFL +L AC +AGLV+EG IF M YG+EPS +HYA MV++L
Sbjct: 508 IFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 567
Query: 585 GRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYV 644
GRAGH+ A + ++ M +P + VW LL AC++H +T LA +EKL ++P+N G +V
Sbjct: 568 GRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHV 627
Query: 645 LLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYT 704
LLSNI++A + A +R + R L K PG + IEIG+ H F + DQSHPQ IY
Sbjct: 628 LLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYE 687
Query: 705 ILGILELEIMEGRRESSEEL 724
L LE ++ E + EL
Sbjct: 688 KLEKLEGKMREAGYQPETEL 707
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/641 (32%), Positives = 358/641 (55%), Gaps = 7/641 (1%)
Query: 67 LSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMA-LQ 125
L + + + G L + VF ++ N + ++ +K G +++ + +Y +M +
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 126 SMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFEN 185
+ P T+P V+R+C + D G+++H VV+ G++ DV +AL+ Y+KC G ++
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC-GDVKS 249
Query: 186 EKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVE 245
+ + R + WN++IS +NG + ELF MR + D TL +++ +
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 246 LKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIM 305
L LGR +H + + F D+SV +L MY S +A+ LF +M KD V W M
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 306 ISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGS 365
IS Y + P ++++ M + + D T A +S+ +T+ +++ G ++H ++
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 366 DYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSE 425
V V N+LI+MY +C+ ++ A IF ++ K V+SW+S+I G +++ EAL +
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489
Query: 426 MKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGC 485
MK+ ++ + +T+ L AC IGAL K +H + ++ G+ + A+ Y +CG
Sbjct: 490 MKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGR 548
Query: 486 IEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLL 545
+ A F+ +K KD+ +WN +++ Y++ G S +L+ +M +S VRPD ITF+ LL
Sbjct: 549 MNTAWSQFNSQK---KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLL 605
Query: 546 TACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPD 605
C + +V +G + F +M E YG P+ +HYA +V+LLGRAG + EA + ++ MP PD
Sbjct: 606 CGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPD 664
Query: 606 ARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTF 665
VWG LL+AC++H + +L EL+A+ + ++ ++ G Y+LL N+YA GKW VAK+R
Sbjct: 665 PAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRM 724
Query: 666 LRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTIL 706
+++ GL GCSW+E+ VH F + D+ HPQ I T+L
Sbjct: 725 MKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 212/416 (50%), Gaps = 13/416 (3%)
Query: 211 NGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSV 270
NGK E++ +L M+ D + L+R ++ E G V+ +A+ S + +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 271 NTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMV-RSG 329
A L+M+ + +L DA +F KMS+++ WN+++ Y + G+ E++ L M+ G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 330 FRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCAR 389
+ D++T + + + ++ GK++H +V+R G + + V N+LI MY +C D+ AR
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 390 KIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIG 449
+FD + + ++SW++MI GY + E L LF M+ V+ D +T+ +++ AC +G
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 450 ALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSM 509
+ +H Y + G SV ++ Y G A +LF +++ KDI++W +M
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF--SRMERKDIVSWTTM 369
Query: 510 ISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEG----RIIFKEMK 565
IS Y + + Y M Q V+PD IT +L+AC G ++ G ++ K
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 566 ESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSE 621
SY + +++N+ + +D+A ++ ++P K + W +++ ++++
Sbjct: 430 ISYVIVAN-----NLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLRLNNR 479
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 231/712 (32%), Positives = 393/712 (55%), Gaps = 51/712 (7%)
Query: 37 SLLNLCENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGL---LSLSQQVF-NSIT 92
S L C+ L+ H R + GL ++ + L+ LG LS +++VF NS +
Sbjct: 37 SSLKNCKTIDELKMFH-RSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 93 SPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEK 152
+Y ++++ + G + +L++ +M + P + T+PF + +C+ +G +
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 153 IHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNSLISLA 208
IH +VK+G+ V ++LV FY +C E ++ F ++ R W S+I
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAEC-----GELDSARKVFDEMSERNVVSWTSMICGY 210
Query: 209 VQNGKSEKSFELF-KLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDF-CK 266
+ ++ + +LF +++R E +S T++ ++ + +L+ LE G V+ S
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 267 DLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMV 326
DL V +AL+ MY K +++ AK LFD+ + + N M S Y + G +E+L + M+
Sbjct: 271 DLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 327 RSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLN 386
SG R D + ++A+SS S ++NI WGK H VLRNG + ++ N+LIDMY +C +
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 387 CARKIFDSVKTKTVVSWSSMIKGYVTHDQ-----------------------------SL 417
A +IFD + KTVV+W+S++ GYV + + SL
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 449
Query: 418 --EALRLFSEMK-LEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNT 474
EA+ +F M+ EGV D VT+++I AC ++GAL+ K+++ Y K G+ + T
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT 509
Query: 475 AIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDV 534
+ +++CG E A +F+ + ++D+ W + I A A G+ + +L+ M + +
Sbjct: 510 TLVDMFSRCGDPESAMSIFN--SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 535 RPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEAR 594
+PD + F+G LTAC + GLV++G+ IF M + +G P HY MV+LLGRAG ++EA
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627
Query: 595 ELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAG 654
+L++DMP +P+ +W LL+AC++ E+A AEK+ + PE G+YVLLSN+YA+AG
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687
Query: 655 KWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTIL 706
+WN +AK+R ++++GL+K PG S I+I HEF + D+SHP+ I +L
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/661 (33%), Positives = 363/661 (54%), Gaps = 12/661 (1%)
Query: 51 IHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFG 110
+HA I L GL N+ + S+L+ Y+ + + +VF ++ N + + +++ + G
Sbjct: 349 VHAEAIKL-GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNG 407
Query: 111 EYEKTLLVYKQMALQSMYPAED-TYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVG 169
E K + ++ M S Y +D T+ ++ +C+ D G + H+ ++K VG
Sbjct: 408 ESHKVMELFMDMK-SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 170 DALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGA 229
+ALV+ Y KC G E+ + + +R WN++I VQ+ ++F+LFK M + G
Sbjct: 467 NALVDMYAKC-GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI 525
Query: 230 EFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKM 289
D L + L++ + L G+ VHC++V +DL ++L+ MYSK ++DA+
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 290 LFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKN 349
+F + + V N +I+ Y Q+ +E++ L M+ G T V + ++
Sbjct: 586 VFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPES 644
Query: 350 IEWGKQMHANVLRNG-SDYQVSVHNSLIDMYCECEDLNCARKIFDSVKT-KTVVSWSSMI 407
+ G Q H + + G S + SL+ MY + A +F + + K++V W+ M+
Sbjct: 645 LTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMM 704
Query: 408 KGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLG-- 465
G+ + EAL+ + EM+ +GV D T + +L C + +L + +H L
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD 764
Query: 466 LNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKL 525
L+ L+S NT I + YAKCG ++ + ++FDE + S ++++WNS+I+ YAK+G K+
Sbjct: 765 LDELTS-NTLIDM-YAKCGDMKGSSQVFDEMRRRS-NVVSWNSLINGYAKNGYAEDALKI 821
Query: 526 YTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLG 585
+ M+QS + PD ITFLG+LTAC +AG V +GR IF+ M YG E +H A MV+LLG
Sbjct: 822 FDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLG 881
Query: 586 RAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVL 645
R G++ EA + ++ KPDAR+W LL AC++H + E++AEKLI +EP+N+ YVL
Sbjct: 882 RWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVL 941
Query: 646 LSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTI 705
LSNIYA+ G W +R +RDRG+KK PG SWI++ + H F A D+SH + I
Sbjct: 942 LSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMF 1001
Query: 706 L 706
L
Sbjct: 1002 L 1002
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 263/551 (47%), Gaps = 13/551 (2%)
Query: 70 NLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYP 129
+I++Y LG L ++ +F ++SP+ + + ++ K G + + M S+
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 130 AEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGM 189
T V+ + + + G +HA+ +KLG S VG +LV Y KC+ +
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE-----KMEA 380
Query: 190 IQRKFKDLKSR----WNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVE 245
+ F+ L+ + WN++I NG+S K ELF M+ G D T +LL +
Sbjct: 381 AAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA 440
Query: 246 LKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIM 305
LE+G H + + K+L V AL+ MY+K +LEDA+ +F++M D+D V WN +
Sbjct: 441 SHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTI 500
Query: 306 ISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGS 365
I +Y Q E+ +L M G +D + + + + + + GKQ+H ++ G
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL 560
Query: 366 DYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSE 425
D + +SLIDMY +C + ARK+F S+ +VVS +++I GY + + EA+ LF E
Sbjct: 561 DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQE 619
Query: 426 MKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSS-VNTAIFISYAKCG 484
M GV +T I+ AC +L HG K G +S + ++ Y
Sbjct: 620 MLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR 679
Query: 485 CIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGL 544
+ A LF E K I+ W M+S ++++G + + K Y +M+ V PD TF+ +
Sbjct: 680 GMTEACALFSELS-SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTV 738
Query: 545 LTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKP 604
L C + EGR I + ++ + +++++ + G M + ++ +M +
Sbjct: 739 LRVCSVLSSLREGRAI-HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS 797
Query: 605 DARVWGPLLSA 615
+ W L++
Sbjct: 798 NVVSWNSLING 808
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 142/566 (25%), Positives = 269/566 (47%), Gaps = 48/566 (8%)
Query: 43 ENPQHL-------QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPN 95
E PQ L + +H++ +IL G+ L + ++D YA +S +++ F+ + +
Sbjct: 67 EMPQRLALALRIGKAVHSKSLIL-GIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKD 124
Query: 96 SLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHA 155
+ ++L S G+ K L + + ++P + T+ V+ +C+ + G +IH
Sbjct: 125 VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHC 184
Query: 156 QVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSE 215
++K+G + G ALV+ Y KCD + + + + W L S V+ G E
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKCD-RISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPE 243
Query: 216 KSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALL 275
++ +F+ MR EG D + + +NT
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTV------------------------------INT--- 270
Query: 276 SMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLF 335
Y +L L+DA++LF +MS D V WN+MIS + + G ++E M +S ++
Sbjct: 271 --YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRS 328
Query: 336 TAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSV 395
T + +S+I + N++ G +HA ++ G + V +SL+ MY +CE + A K+F+++
Sbjct: 329 TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Query: 396 KTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVK 455
+ K V W++MI+GY + +S + + LF +MK G +D T ++L C LE
Sbjct: 389 EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS 448
Query: 456 YLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAK 515
H +K L V A+ YAKCG +E A ++F E++ +D +TWN++I +Y +
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF--ERMCDRDNVTWNTIIGSYVQ 506
Query: 516 HGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQE 575
+ S+ F L+ +M + D L AC + + +G+ + + G +
Sbjct: 507 DENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC-LSVKCGLDRDLH 565
Query: 576 HYASMVNLLGRAGHMDEARELVKDMP 601
+S++++ + G + +AR++ +P
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 158/614 (25%), Positives = 284/614 (46%), Gaps = 52/614 (8%)
Query: 18 FLRFPANQTRPHMTATHSFSL-LNLC---ENPQHLQQIHARYIILHGLHQNLILSSNLID 73
F+ NQ P+ +FS+ L+ C N + +QIH I + GL +N L+D
Sbjct: 148 FVSLFENQIFPN---KFTFSIVLSTCARETNVEFGRQIHCSMIKM-GLERNSYCGGALVD 203
Query: 74 SYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDT 133
YA +S +++VF I PN++ + + K G E+ +LV+++M + P
Sbjct: 204 MYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLA 263
Query: 134 YPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRK 193
+ VI + +I K+ + G S DV
Sbjct: 264 FVTVINT------YIRLGKLKDARLLFGEMSSPDV------------------------- 292
Query: 194 FKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGR 253
WN +IS + G + E F MR + TL ++L + + +L+LG
Sbjct: 293 -----VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
Query: 254 IVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSG 313
+VH A+ ++ V ++L+SMYSK +E A +F+ + +K+ V WN MI Y +G
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNG 407
Query: 314 FPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHN 373
+ +EL M M SG+ D FT + +S+ + ++E G Q H+ +++ + V N
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 374 SLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEV 433
+L+DMY +C L AR+IF+ + + V+W+++I YV + EA LF M L G+
Sbjct: 468 ALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS 527
Query: 434 DFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELF 493
D + + L AC ++ L K +H S+K GL+ +++ Y+KCG I+ A ++F
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF 587
Query: 494 DEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGL 553
+ +++ N++I+ Y+++ + + L+ +M V P ITF ++ AC
Sbjct: 588 --SSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPES 644
Query: 554 VEEGRIIFKEMKESYGYEPSQEHYA-SMVNLLGRAGHMDEARELVKDMPFKPDARVWGPL 612
+ G ++ + G+ E+ S++ + + M EA L ++ +W +
Sbjct: 645 LTLGTQFHGQITKR-GFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGM 703
Query: 613 LSACKMHSETELAE 626
+S HS+ E
Sbjct: 704 MSG---HSQNGFYE 714
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 170/375 (45%), Gaps = 40/375 (10%)
Query: 248 SLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMIS 307
+L +G+ VH +++ + + A++ +Y+K A + A+ FD + +KD WN M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 308 AYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDY 367
Y G P + L + + + + FT +S+ + N+E+G+Q+H ++++ G +
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 368 QVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMK 427
+L+DMY +C+ ++ AR++F+ + V W+ + GYV EA+ +F M+
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 428 LEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIE 487
EG D + + ++ + +G L+ + L G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFG---------------------------- 285
Query: 488 MAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTA 547
++ S D++ WN MIS + K G + + + M++S V+ T +L+A
Sbjct: 286 ---------EMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 548 CVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDAR 607
++ G ++ E + G + +S+V++ + M+ A ++ + + K D
Sbjct: 337 IGIVANLDLGLVVHAEAIK-LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV- 394
Query: 608 VWGPLLSACKMHSET 622
W ++ + E+
Sbjct: 395 FWNAMIRGYAHNGES 409
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/677 (32%), Positives = 356/677 (52%), Gaps = 87/677 (12%)
Query: 132 DTYPFVIRSCSCL---LDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEK- 187
D+ PF SC+ L I +HA V+K GF + + + L++ Y KC G E+ +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKC-GSLEDGRQ 76
Query: 188 ---GMIQRK-----------------------FKDLKSR----WNSLISLAVQNGKSEKS 217
M QR F+ + R WNS++S Q+ + E++
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 218 FELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSM 277
F +M EG + + ++L + L + G VH + S F D+ + +AL+ M
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 278 YSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTA 337
YSK ++ DA+ +FD+M D++ V WN +I+ + Q+G E+L++ M+ S D T
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 338 IAAVSSISTMKNIEWGKQMHANVLRNGS-DYQVSVHNSLIDMYCECEDLNCARKIFDSVK 396
+ +S+ +++ I+ G+++H V++N + + N+ +DMY +C + AR IFDS+
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 397 TKTV-------------------------------VSWSSMIKGYVTHDQSLEALRLFSE 425
+ V VSW+++I GY + ++ EAL LF
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 426 MKLEGVEVDFVTIINILPACVNIGALE-----HVKYL-HGYSMKLGLNSLSSVNTAIFIS 479
+K E V + NIL AC ++ L HV L HG+ + G V ++
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 480 YAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLI 539
Y KCGC+E +F K+ +D ++WN+MI +A++G ++ +L+ +M +S +PD I
Sbjct: 437 YVKCGCVEEGYLVF--RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 494
Query: 540 TFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKD 599
T +G+L+AC +AG VEEGR F M +G P ++HY MV+LLGRAG ++EA+ ++++
Sbjct: 495 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE 554
Query: 600 MPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGV 659
MP +PD+ +WG LL+ACK+H L + AEKL+ +EP N+G YVLLSN+YA GKW V
Sbjct: 555 MPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDV 614
Query: 660 AKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILELEIMEGRRE 719
+R +R G+ K PGCSWI+I H F D+SHP+ I+++L IL I E R E
Sbjct: 615 MNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL---IAEMRPE 671
Query: 720 ---------SSEELKFS 727
SSEE+ +S
Sbjct: 672 QDHTEIGSLSSEEMDYS 688
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 147/578 (25%), Positives = 265/578 (45%), Gaps = 88/578 (15%)
Query: 18 FLRFPANQTRPHMTATHSFS-LLNLCENPQHLQQIHARYI----ILHGLHQNLILSSNLI 72
FL+ A+ + T + F+ LL+ C + L I+ RY+ I G + + + LI
Sbjct: 6 FLKLAADLSS--FTDSSPFAKLLDSCIKSK-LSAIYVRYVHASVIKSGFSNEIFIQNRLI 62
Query: 73 DSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFG---------------------- 110
D+Y+ G L +QVF+ + N + +++ L+K G
Sbjct: 63 DAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNS 122
Query: 111 ---------EYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLG 161
E+ L + M + E ++ V+ +CS L D G ++H+ + K
Sbjct: 123 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 182
Query: 162 FDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNSLISLAVQNGKSEKS 217
F S +G ALV+ Y KC G N+ QR F ++ R WNSLI+ QNG + ++
Sbjct: 183 FLSDVYIGSALVDMYSKC--GNVNDA---QRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237
Query: 218 FELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCK-DLSVNTALLS 276
++F++M E D TL +++ + L ++++G+ VH V +D + D+ ++ A +
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 277 MYSKLASLEDAKMLFD-------------------------------KMSDKDRVVWNIM 305
MY+K + +++A+ +FD KM++++ V WN +
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 306 ISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGS 365
I+ Y Q+G +E+L L + R ++ + + + + + G Q H +VL++G
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417
Query: 366 DYQ------VSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEA 419
+Q + V NSLIDMY +C + +F + + VSW++MI G+ + EA
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 420 LRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVK-YLHGYSMKLGLNSLSSVNTAIFI 478
L LF EM G + D +T+I +L AC + G +E + Y + G+ L T +
Sbjct: 478 LELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 479 SYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKH 516
+ G +E A + +E + D + W S+++A H
Sbjct: 538 LLGRAGFLEEAKSMIEEMPM-QPDSVIWGSLLAACKVH 574
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/680 (31%), Positives = 374/680 (55%), Gaps = 14/680 (2%)
Query: 37 SLLNLCENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNS 96
+L C N Q + +HAR ++ + QN+ +S+ L++ Y LG ++L++ F+ I + +
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQI-QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDV 117
Query: 97 LLYGTILKNLSKFGEYEKTLLVYKQMALQS-MYPAEDTYPFVIRSCSCLLDFISGEKIHA 155
+ ++ + G + + + L S + P T+P V+++C ++D G KIH
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 156 QVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSE 215
+K GF V +L+ Y + + +D+ S WN++IS Q+G ++
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMISGYCQSGNAK 233
Query: 216 KSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALL 275
++ L +R DS T+++LL + E G +H ++ +L V+ L+
Sbjct: 234 EALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 276 SMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLF 335
+Y++ L D + +FD+M +D + WN +I AY + P ++ L M S + D
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 336 TAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQ-VSVHNSLIDMYCECEDLNCARKIFDS 394
T I+ S +S + +I + + LR G + +++ N+++ MY + ++ AR +F+
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 395 VKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEG-VEVDFVTIINILPACVNIGALEH 453
+ V+SW+++I GY + + EA+ +++ M+ EG + + T +++LPAC GAL
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 454 VKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAY 513
LHG +K GL V T++ Y KCG +E A LF +I + + WN++I+ +
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF--YQIPRVNSVPWNTLIACH 527
Query: 514 AKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPS 573
HG + L+ +M V+PD ITF+ LL+AC ++GLV+EG+ F+ M+ YG PS
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS 587
Query: 574 QEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLI 633
+HY MV++ GRAG ++ A + +K M +PDA +WG LLSAC++H +L ++ +E L
Sbjct: 588 LKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLF 647
Query: 634 SMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAAD 693
+EPE+ G +VLLSN+YA+AGKW GV ++R+ +GL+KTPG S +E+ V F+ +
Sbjct: 648 EVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGN 707
Query: 694 QSHPQADAIYTILGILELEI 713
Q+HP + +Y L L+ ++
Sbjct: 708 QTHPMYEEMYRELTALQAKL 727
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/669 (32%), Positives = 370/669 (55%), Gaps = 14/669 (2%)
Query: 53 ARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEY 112
AR + H+N + ++ +I + G +S ++ +F+++ + + ++ ++ +
Sbjct: 67 ARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHF 126
Query: 113 EKTLLVYKQMALQS--MYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDS--FDDV 168
++ +++QM S P T+ ++ C+ + + ++HA VKLGFD+ F V
Sbjct: 127 DEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTV 186
Query: 169 GDALVEFYIKCDGGFENEKGMIQRKFKDLKS-RWNSLISLAVQNGKSEKSFELFKLMRME 227
+ L++ Y C+ + ++ + + S +N+LI+ ++G +S LF MR
Sbjct: 187 SNVLLKSY--CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQS 244
Query: 228 GAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDA 287
G + T +L++ V L LG+ +H ++V + F +D SV +L YSK + +
Sbjct: 245 GHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLET 304
Query: 288 KMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTM 347
+MLFD+M + D V +N++IS+Y Q+ + SL M GF F +S + +
Sbjct: 305 RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANL 364
Query: 348 KNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMI 407
+++ G+Q+H L +D + V NSL+DMY +CE A IF S+ +T VSW+++I
Sbjct: 365 SSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALI 424
Query: 408 KGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLN 467
GYV L+LF++M+ + D T +L A + +L K LH + ++ G
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG-- 482
Query: 468 SLSSV--NTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKL 525
+L +V + + YAKCG I+ A ++F+E + ++ ++WN++ISA+A +GD
Sbjct: 483 NLENVFSGSGLVDMYAKCGSIKDAVQVFEE--MPDRNAVSWNALISAHADNGDGEAAIGA 540
Query: 526 YTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLG 585
+ +M +S ++PD ++ LG+LTAC + G VE+G F+ M YG P ++HYA M++LLG
Sbjct: 541 FAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLG 600
Query: 586 RAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEP-ENAGNYV 644
R G EA +L+ +MPF+PD +W +L+AC++H LAE AEKL SME +A YV
Sbjct: 601 RNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYV 660
Query: 645 LLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYT 704
+SNIYAAAG+W V ++ +R+RG+KK P SW+E+ +H F + DQ+HP D I
Sbjct: 661 SMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVR 720
Query: 705 ILGILELEI 713
+ L EI
Sbjct: 721 KINELTAEI 729
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 197/408 (48%), Gaps = 21/408 (5%)
Query: 49 QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSK 108
QQ+HA + G ++ + + ++D Y+ + ++ +F+ + + + Y ++ + S+
Sbjct: 270 QQLHALSVTT-GFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 109 FGEYEKTLLVYKQMALQSMYPAEDTYPF--VIRSCSCLLDFISGEKIHAQVVKLGFDSFD 166
+YE +L +++M Q M +PF ++ + L G ++H Q + DS
Sbjct: 329 ADQYEASLHFFREM--QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 167 DVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNSLISLAVQNGKSEKSFELFK 222
VG++LV+ Y KC+ FE E +I FK L R W +LIS VQ G +LF
Sbjct: 387 HVGNSLVDMYAKCE-MFE-EAELI---FKSLPQRTTVSWTALISGYVQKGLHGAGLKLFT 441
Query: 223 LMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLA 282
MR D T +L+++ SL LG+ +H + S +++ + L+ MY+K
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 501
Query: 283 SLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVS 342
S++DA +F++M D++ V WN +ISA+ +G + ++ M+ SG + D + + ++
Sbjct: 502 SIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561
Query: 343 SISTMKNIEWGKQ-MHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKT-V 400
+ S +E G + A G + + ++D+ A K+ D + +
Sbjct: 562 ACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDE 621
Query: 401 VSWSSMIKGYVTH-DQSL---EALRLFSEMKLEGVEVDFVTIINILPA 444
+ WSS++ H +QSL A +LFS KL +V++ NI A
Sbjct: 622 IMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAA-YVSMSNIYAA 668
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 107/231 (46%), Gaps = 37/231 (16%)
Query: 354 KQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKI---------------------- 391
+++ A +++ G D N +++ ++ ARK+
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 392 ---------FDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEG--VEVDFVTIIN 440
FD++ +TVV+W+ ++ Y + EA +LF +M D VT
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 441 ILPACVNIGALEHVKYLHGYSMKLGL--NSLSSVNTAIFISYAKCGCIEMAGELFDEEKI 498
+LP C + V +H +++KLG N +V+ + SY + +++A LF+E I
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE--I 210
Query: 499 DSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACV 549
KD +T+N++I+ Y K G +++ L+ +M+QS +P TF G+L A V
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/662 (32%), Positives = 362/662 (54%), Gaps = 7/662 (1%)
Query: 55 YIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEK 114
+++ G +++ + + LID Y G + ++ VF+++ +++ + T++ K G
Sbjct: 173 FLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYV 232
Query: 115 TLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVE 174
+L ++ Q+ ++ P V+ +CS L G++IHA +++ G + + + L++
Sbjct: 233 SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLID 292
Query: 175 FYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSG 234
Y+KC K K++ S W +L+S QN +++ ELF M G + D
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIIS-WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 235 TLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKM 294
++L S L +L G VH + ++ D V +L+ MY+K L DA+ +FD
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 295 SDKDRVVWNIMISAYYQSGFP---KESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIE 351
+ D V++N MI Y + G E+L + M R L T ++ + + +++ ++
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 352 WGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYV 411
KQ+H + + G + + ++LID+Y C L +R +FD +K K +V W+SM GYV
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYV 531
Query: 412 THDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSS 471
++ EAL LF E++L D T N++ A N+ +++ + H +K GL
Sbjct: 532 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 591
Query: 472 VNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQ 531
+ A+ YAKCG E A + FD S+D++ WNS+IS+YA HG+ + ++ +M
Sbjct: 592 ITNALLDMYAKCGSPEDAHKAFDSAA--SRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649
Query: 532 SDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMD 591
+ P+ ITF+G+L+AC +AGLVE+G F E+ +G EP EHY MV+LLGRAG ++
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQF-ELMLRFGIEPETEHYVCMVSLLGRAGRLN 708
Query: 592 EARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYA 651
+AREL++ MP KP A VW LLS C ELAE AE I +P+++G++ +LSNIYA
Sbjct: 709 KARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYA 768
Query: 652 AAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILEL 711
+ G W K+R ++ G+ K PG SWI I K VH F + D+SH +A+ IY +L L +
Sbjct: 769 SKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLV 828
Query: 712 EI 713
+I
Sbjct: 829 QI 830
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/618 (27%), Positives = 307/618 (49%), Gaps = 25/618 (4%)
Query: 47 HLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNL 106
H Q + II+ GL + LS+ LI+ Y+ G + +++VF + N + + T++
Sbjct: 61 HYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSAC 120
Query: 107 SKFGEYEKTLLVYKQM-ALQSMYPAEDTYPFVIRSCSCLLDFISGE------KIHAQVVK 159
+ G YE++L+V+ + + P E I++CS L G ++ + +VK
Sbjct: 121 NHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL----DGRGRWMVFQLQSFLVK 176
Query: 160 LGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFE 219
GFD VG L++FY+K DG + + + + W ++IS V+ G+S S +
Sbjct: 177 SGFDRDVYVGTLLIDFYLK-DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQ 235
Query: 220 LFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYS 279
LF + + D L +L + L LE G+ +H + D S+ L+ Y
Sbjct: 236 LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYV 295
Query: 280 KLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIA 339
K + A LF+ M +K+ + W ++S Y Q+ KE++EL M + G + D++ +
Sbjct: 296 KCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSS 355
Query: 340 AVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKT 399
++S +++ + +G Q+HA ++ V NSLIDMY +C+ L ARK+FD
Sbjct: 356 ILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAAD 415
Query: 400 VVSWSSMIKGYV---THDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKY 456
VV +++MI+GY T + EAL +F +M+ + +T +++L A ++ +L K
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ 475
Query: 457 LHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKH 516
+HG K GLN +A+ Y+ C C++ + +FDE K+ KD++ WNSM + Y +
Sbjct: 476 IHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV--KDLVIWNSMFAGYVQQ 533
Query: 517 GDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEH 576
+ + L+ +++ S RPD TF ++TA N V+ G+ ++ + G E +
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKR-GLECNPYI 592
Query: 577 YASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLIS-- 634
+++++ + G ++A + D D W ++S+ H E + A EK++S
Sbjct: 593 TNALLDMYAKCGSPEDAHKAF-DSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG 651
Query: 635 MEPENAGNYVLLSNIYAA 652
+EP NY+ + +A
Sbjct: 652 IEP----NYITFVGVLSA 665
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 245/481 (50%), Gaps = 22/481 (4%)
Query: 49 QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSK 108
+QIHA +I+ +GL + L + LIDSY G + + ++FN + + N + + T+L +
Sbjct: 269 KQIHA-HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 109 FGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVK--LGFDSFD 166
+++ + ++ M+ + P ++ SC+ L G ++HA +K LG DS+
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY- 386
Query: 167 DVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSE--------KSF 218
V ++L++ Y KCD + RK D+ + + ++ A+ G S ++
Sbjct: 387 -VTNSLIDMYAKCDCLTD------ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEAL 439
Query: 219 ELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMY 278
+F+ MR T ++LLR++ L SL L + +H + D+ +AL+ +Y
Sbjct: 440 NIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVY 499
Query: 279 SKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAI 338
S L+D++++FD+M KD V+WN M + Y Q +E+L L + + S R D FT
Sbjct: 500 SNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFA 559
Query: 339 AAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTK 398
V++ + +++ G++ H +L+ G + + N+L+DMY +C A K FDS ++
Sbjct: 560 NMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR 619
Query: 399 TVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLH 458
VV W+S+I Y H + +AL++ +M EG+E +++T + +L AC + G +E
Sbjct: 620 DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQF 679
Query: 459 GYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKD-IITWNSMISAYAKHG 517
++ G+ + + + G + A EL EK+ +K I W S++S AK G
Sbjct: 680 ELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELI--EKMPTKPAAIVWRSLLSGCAKAG 737
Query: 518 D 518
+
Sbjct: 738 N 738
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/535 (25%), Positives = 257/535 (48%), Gaps = 22/535 (4%)
Query: 153 IHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNG 212
+H Q++ G + + + L+ Y + G K + ++L S W++++S +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVS-WSTMVSACNHHG 124
Query: 213 KSEKSFELF-KLMRMEGAEFDSGTLINLLRSTVELKSLELGRI----VHCVAVVSDFCKD 267
E+S +F + R + L + +++ L GR + V S F +D
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR--GRWMVFQLQSFLVKSGFDRD 182
Query: 268 LSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVR 327
+ V T L+ Y K +++ A+++FD + +K V W MIS + G SL+L ++
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 328 SGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNC 387
D + +S+ S + +E GKQ+HA++LR G + S+ N LID Y +C +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 388 ARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVN 447
A K+F+ + K ++SW++++ GY + EA+ LF+ M G++ D +IL +C +
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 448 IGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWN 507
+ AL +H Y++K L + S V ++ YAKC C+ A ++FD + D++ +N
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD--IFAAADVVLFN 420
Query: 508 SMISAYAKHG-DWS--QCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEM 564
+MI Y++ G W + ++ M+ +RP L+TF+ LL A + + + I M
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480
Query: 565 KESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETEL 624
+ YG ++++++ + ++R + +M K D +W + + SE E
Sbjct: 481 FK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYVQQSENEE 538
Query: 625 A-ELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTF---LRDRGLKKTP 675
A L E +S E + + +N+ AAG V + F L RGL+ P
Sbjct: 539 ALNLFLELQLSRERPDEFTF---ANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 590
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 170/317 (53%), Gaps = 13/317 (4%)
Query: 240 LRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDR 299
LR++ +L L +VH +V D ++ L+++YS+ + A+ +F+KM +++
Sbjct: 53 LRASDDL--LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNL 110
Query: 300 VVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGK----- 354
V W+ M+SA G +ESL + + R+ R D S I ++ G+
Sbjct: 111 VSWSTMVSACNHHGIYEESLVVFLEFWRT--RKDSPNEYILSSFIQACSGLD-GRGRWMV 167
Query: 355 -QMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTH 413
Q+ + ++++G D V V LID Y + +++ AR +FD++ K+ V+W++MI G V
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM 227
Query: 414 DQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVN 473
+S +L+LF ++ + V D + +L AC + LE K +H + ++ GL +S+
Sbjct: 228 GRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 474 TAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSD 533
+ SY KCG + A +LF+ + +K+II+W +++S Y ++ + +L+T M +
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFN--GMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG 345
Query: 534 VRPDLITFLGLLTACVN 550
++PD+ +LT+C +
Sbjct: 346 LKPDMYACSSILTSCAS 362
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/695 (32%), Positives = 372/695 (53%), Gaps = 11/695 (1%)
Query: 30 MTATHSFSLLNLCENP----QHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQ 85
M ++ SLL C N + ++ +H R + L GL ++++L +LI+ Y ++
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTL-GLRRDVVLCKSLINVYFTCKDHCSAR 59
Query: 86 QVF-NSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSM-YPAEDTYPFVIRSCSC 143
VF N + ++ +++ SK + TL V+K++ S+ P T+P VI++
Sbjct: 60 HVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGA 119
Query: 144 LLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNS 203
L G IH VVK G+ V +LV Y K + FEN + + + WN+
Sbjct: 120 LGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNL-FENSLQVFDEMPERDVASWNT 178
Query: 204 LISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSD 263
+IS Q+G++EK+ ELF M G E +S +L + + L LE G+ +H V
Sbjct: 179 VISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKG 238
Query: 264 FCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLM 323
F D VN+AL+ MY K LE A+ +F KM K V WN MI Y G K +E+L
Sbjct: 239 FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILN 298
Query: 324 CMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECE 383
M+ G R T + + + S +N+ GK +H V+R+ + + V+ SLID+Y +C
Sbjct: 299 RMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG 358
Query: 384 DLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILP 443
+ N A +F + SW+ MI Y++ +A+ ++ +M GV+ D VT ++LP
Sbjct: 359 EANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 444 ACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDI 503
AC + ALE K +H + L + + +A+ Y+KCG + A +F+ I KD+
Sbjct: 419 ACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN--SIPKKDV 476
Query: 504 ITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKE 563
++W MISAY HG + + +M++ ++PD +T L +L+AC +AGL++EG F +
Sbjct: 477 VSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ 536
Query: 564 MKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPD-ARVWGPLLSACKMHSET 622
M+ YG EP EHY+ M+++LGRAG + EA E+++ P D A + L SAC +H E
Sbjct: 537 MRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEH 596
Query: 623 ELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEI 682
L + A L+ P++A Y++L N+YA+ W+ ++R +++ GL+K PGCSWIE+
Sbjct: 597 SLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEM 656
Query: 683 GKLVHEFWAADQSHPQADAIYTILGILELEIMEGR 717
V F+A D+SH +A+ +Y L +L + G+
Sbjct: 657 SDKVCHFFAEDRSHLRAENVYECLALLSGHMESGQ 691
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/656 (33%), Positives = 346/656 (52%), Gaps = 16/656 (2%)
Query: 37 SLLNLCENPQHLQQIHARY--IILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSP 94
SLLN Q + + A + +I G ILS+ L +YA G ++ ++++F +
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRVSGHILST-LSVTYALCGHITYARKLFEEMPQS 78
Query: 95 NSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAED--TYPFVIRSCSCLLDFISGEK 152
+ L Y +++ + G Y + V+ +M + + D TYPFV ++ L G
Sbjct: 79 SLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLV 138
Query: 153 IHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNSLISLA 208
+H ++++ F V +AL+ Y+ G E M + F +K+R WN++IS
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNF-GKVE----MARDVFDVMKNRDVISWNTMISGY 193
Query: 209 VQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDL 268
+NG + +F M E + D T++++L LK LE+GR VH + +
Sbjct: 194 YRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKI 253
Query: 269 SVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRS 328
V AL++MY K +++A+ +FD+M +D + W MI+ Y + G + +LEL M
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 329 GFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCA 388
G R + T + VS + GK +H +R + + SLI MY +C+ ++
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 389 RKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNI 448
++F WS++I G V ++ +AL LF M+ E VE + T+ ++LPA +
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAAL 433
Query: 449 GALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFD--EEKIDSKDIITW 506
L +H Y K G S T + Y+KCG +E A ++F+ +EK SKD++ W
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 507 NSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKE 566
++IS Y HGD +++ +M +S V P+ ITF L AC ++GLVEEG +F+ M E
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
Query: 567 SYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAE 626
Y HY +V+LLGRAG +DEA L+ +PF+P + VWG LL+AC H +L E
Sbjct: 554 HYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGE 613
Query: 627 LTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEI 682
+ A KL +EPEN GNYVLL+NIYAA G+W + K+R+ + + GL+K PG S IEI
Sbjct: 614 MAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 365 bits (936), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 224/681 (32%), Positives = 384/681 (56%), Gaps = 27/681 (3%)
Query: 49 QQIHAR-YIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLS 107
+QIHA Y +G+ ++ +++ L++ Y G +VF+ I+ N + + +++ +L
Sbjct: 117 KQIHAHVYKFGYGV-DSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 108 KFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLL---DFISGEKIHAQVVKLG-FD 163
F ++E L ++ M +++ P+ T V+ +CS L + G+++HA ++ G +
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN 235
Query: 164 SFDDVGDALVEFYIKCDGGFENEKGMIQR-KFKDLKSRWNSLISLAVQNGKSEKSFELFK 222
SF + + LV Y K G + K ++ +DL + WN+++S QN + ++ E +
Sbjct: 236 SF--IINTLVAMYGKL-GKLASSKVLLGSFGGRDLVT-WNTVLSSLCQNEQLLEALEYLR 291
Query: 223 LMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLS-VNTALLSMYSKL 281
M +EG E D T+ ++L + L+ L G+ +H A+ + + S V +AL+ MY
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351
Query: 282 ASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRS-GFRADLFTAIAA 340
+ + +FD M D+ +WN MI+ Y Q+ KE+L L + M S G A+ T
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 341 VSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTV 400
V + + +H V++ G D V N+L+DMY ++ A +IF ++ + +
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
Query: 401 VSWSSMIKGYVTHDQSLEALRLFSEMK-LE----------GVEVDFVTIINILPACVNIG 449
V+W++MI GYV + +AL L +M+ LE ++ + +T++ ILP+C +
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 531
Query: 450 ALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSM 509
AL K +H Y++K L + +V +A+ YAKCGC++M+ ++FD+ I K++ITWN +
Sbjct: 532 ALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ--IPQKNVITWNVI 589
Query: 510 ISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYG 569
I AY HG+ + L M V+P+ +TF+ + AC ++G+V+EG IF MK YG
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYG 649
Query: 570 YEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPD-ARVWGPLLSACKMHSETELAELT 628
EPS +HYA +V+LLGRAG + EA +L+ MP + A W LL A ++H+ E+ E+
Sbjct: 650 VEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIA 709
Query: 629 AEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHE 688
A+ LI +EP A +YVLL+NIY++AG W+ ++R ++++G++K PGCSWIE G VH+
Sbjct: 710 AQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHK 769
Query: 689 FWAADQSHPQADAIYTILGIL 709
F A D SHPQ++ + L L
Sbjct: 770 FVAGDSSHPQSEKLSGYLETL 790
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 152/536 (28%), Positives = 269/536 (50%), Gaps = 35/536 (6%)
Query: 113 EKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGF--DSFDDVGD 170
+ +L Y M + + P +P ++++ + L D G++IHA V K G+ DS V +
Sbjct: 79 REAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSV-TVAN 137
Query: 171 ALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNSLISLAVQNGKSEKSFELFKLMRM 226
LV Y KC G F G + + F + R WNSLIS K E + E F+ M
Sbjct: 138 TLVNLYRKC-GDF----GAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 192
Query: 227 EGAEFDSGTLINLLRSTVEL---KSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLAS 283
E E S TL++++ + L + L +G+ VH + +NT L++MY KL
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGK 251
Query: 284 LEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSS 343
L +K+L +D V WN ++S+ Q+ E+LE L MV G D FT + + +
Sbjct: 252 LASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPA 311
Query: 344 ISTMKNIEWGKQMHANVLRNGS-DYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVS 402
S ++ + GK++HA L+NGS D V ++L+DMYC C+ + R++FD + + +
Sbjct: 312 CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL 371
Query: 403 WSSMIKGYVTHDQSLEALRLFSEMKLE-GVEVDFVTIINILPACVNIGALEHVKYLHGYS 461
W++MI GY ++ EAL LF M+ G+ + T+ ++PACV GA + +HG+
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 462 MKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQ 521
+K GL+ V + Y++ G I++A +F K++ +D++TWN+MI+ Y
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFG--KMEDRDLVTWNTMITGYVFSEHHED 489
Query: 522 CFKLYTQMK-----------QSDVRPDLITFLGLLTACVNAGLVEEGRIIFK-EMKESYG 569
L +M+ + ++P+ IT + +L +C + +G+ I +K +
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 549
Query: 570 YEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELA 625
+ + +++V++ + G + +R++ +P K + W ++ A MH + A
Sbjct: 550 TDVAVG--SALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGNGQEA 602
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 217/442 (49%), Gaps = 11/442 (2%)
Query: 201 WNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAV 260
W L+ V++ ++ + M + G + D+ LL++ +L+ +ELG+ +H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 261 VSDFCKD-LSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESL 319
+ D ++V L+++Y K +FD++S++++V WN +IS+ + +L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 320 ELLMCMVRSGFRADLFTAIAAVSSISTM---KNIEWGKQMHANVLRNGSDYQVSVHNSLI 376
E CM+ FT ++ V++ S + + + GKQ+HA LR G + + N+L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 377 DMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFV 436
MY + L ++ + S + +V+W++++ ++Q LEAL EM LEGVE D
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 437 TIINILPACVNIGALEHVKYLHGYSMKLG-LNSLSSVNTAIFISYAKCGCIEMAGELFDE 495
TI ++LPAC ++ L K LH Y++K G L+ S V +A+ Y C + +FD
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD- 362
Query: 496 EKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQS-DVRPDLITFLGLLTACVNAGLV 554
+ + I WN+MI+ Y+++ + L+ M++S + + T G++ ACV +G
Sbjct: 363 -GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 555 EEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLS 614
I + + G + + +++++ R G +D A + M + D W +++
Sbjct: 422 SRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMIT 479
Query: 615 ACKMHSETELAELTAEKLISME 636
E A L K+ ++E
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLE 501
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 180/375 (48%), Gaps = 17/375 (4%)
Query: 302 WNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVL 361
W ++ + +S +E++ + M+ G + D + A + +++ ++++E GKQ+HA+V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 362 RNGSDYQ-VSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEAL 420
+ G V+V N+L+++Y +C D K+FD + + VSW+S+I + ++ AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 421 RLFSEMKLEGVEVDFVTIINILPACVNIGALEHV---KYLHGYSMKLG-LNSLSSVNTAI 476
F M E VE T+++++ AC N+ E + K +H Y ++ G LNS +NT +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLV 243
Query: 477 FISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRP 536
+ Y K G + + L +D++TWN+++S+ ++ + + +M V P
Sbjct: 244 AM-YGKLGKLASSKVLLGS--FGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 537 DLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEAREL 596
D T +L AC + ++ G+ + ++ + + +++V++ + R +
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 597 VKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKW 656
M F +W +++ +S+ E + I ME E+AG LL+N AG
Sbjct: 361 FDGM-FDRKIGLWNAMIAG---YSQNEHDKEALLLFIGME-ESAG---LLANSTTMAGVV 412
Query: 657 NGVAKMRTFLRDRGL 671
+ F R +
Sbjct: 413 PACVRSGAFSRKEAI 427
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 364 bits (934), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 205/660 (31%), Positives = 356/660 (53%), Gaps = 10/660 (1%)
Query: 49 QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSK 108
+Q+H + I G ++ + ++L+D+Y ++VF+ + N + + T++ ++
Sbjct: 113 RQLHCQCIKF-GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 109 FGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDV 168
++ L ++ +M + P T+ + + G ++H VVK G D V
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 169 GDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEG 228
++L+ Y+KC G + + + WNS+IS NG ++ +F MR+
Sbjct: 232 SNSLINLYLKC-GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 229 AEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAK 288
+ ++++ LK L +HC V F D ++ TAL+ YSK ++ DA
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 289 MLFDKMSDKDRVV-WNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTM 347
LF ++ VV W MIS + Q+ +E+++L M R G R + FT ++++ +
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 348 KNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMI 407
E +HA V++ + +V +L+D Y + + A K+F + K +V+WS+M+
Sbjct: 411 SPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 408 KGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGA-LEHVKYLHGYSMKLGL 466
GY ++ A+++F E+ G++ + T +IL C A + K HG+++K L
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526
Query: 467 NSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLY 526
+S V++A+ YAK G IE A E+F ++ KD+++WNSMIS YA+HG + ++
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQR--EKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 527 TQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGR 586
+MK+ V+ D +TF+G+ AC +AGLVEEG F M P++EH + MV+L R
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR 644
Query: 587 AGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLL 646
AG +++A +++++MP + +W +L+AC++H +TEL L AEK+I+M+PE++ YVLL
Sbjct: 645 AGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLL 704
Query: 647 SNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTIL 706
SN+YA +G W AK+R + +R +KK PG SWIE+ + F A D+SHP D IY L
Sbjct: 705 SNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKL 764
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 215/416 (51%), Gaps = 7/416 (1%)
Query: 210 QNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLS 269
++G+++++ LF + G E D ++L+ + L GR +HC + F D+S
Sbjct: 70 RDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVS 129
Query: 270 VNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSG 329
V T+L+ Y K ++ +D + +FD+M +++ V W +IS Y ++ E L L M M G
Sbjct: 130 VGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189
Query: 330 FRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCAR 389
+ + FT AA+ ++ G Q+H V++NG D + V NSLI++Y +C ++ AR
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKAR 249
Query: 390 KIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIG 449
+FD + K+VV+W+SMI GY + LEAL +F M+L V + + +++ C N+
Sbjct: 250 ILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLK 309
Query: 450 ALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSM 509
L + LH +K G ++ TA+ ++Y+KC + A LF E ++++W +M
Sbjct: 310 ELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG-NVVSWTAM 368
Query: 510 ISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYG 569
IS + ++ + L+++MK+ VRP+ T+ +LTA E + K
Sbjct: 369 ISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKT-----N 423
Query: 570 YEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELA 625
YE S ++++ + G ++EA ++ + K D W +L+ ETE A
Sbjct: 424 YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTGETEAA 478
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 152/591 (25%), Positives = 282/591 (47%), Gaps = 38/591 (6%)
Query: 45 PQHLQQIHARY-IILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTIL 103
P L+ ++ I +G+ Q I + S L + +F+ + Y ++L
Sbjct: 10 PPSLENFKPKFRIYANGVAQVRIYCFGTVSS----SRLYNAHNLFDKSPGRDRESYISLL 65
Query: 104 KNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFD 163
S+ G ++ ++ + M + V++ + L D + G ++H Q +K GF
Sbjct: 66 FGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFL 125
Query: 164 SFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNSLISLAVQNGKSEKSFE 219
VG +LV+ Y+K G + G ++ F ++K R W +LIS +N +++
Sbjct: 126 DDVSVGTSLVDTYMK---GSNFKDG--RKVFDEMKERNVVTWTTLISGYARNSMNDEVLT 180
Query: 220 LFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYS 279
LF M+ EG + +S T L E G VH V V + K + V+ +L+++Y
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 280 KLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIA 339
K ++ A++LFDK K V WN MIS Y +G E+L + M + R + +
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 340 AVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVK-TK 398
+ + +K + + +Q+H +V++ G + ++ +L+ Y +C + A ++F +
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 399 TVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLH 458
VVSW++MI G++ +D EA+ LFSEMK +GV + T IL A I E +H
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VH 416
Query: 459 GYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGD 518
+K S+V TA+ +Y K G +E A ++F ID KDI+ W++M++ YA+ G+
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS--GIDDKDIVAWSAMLAGYAQTGE 474
Query: 519 WSQCFKLYTQMKQSDVRPDLITFLGLLTAC--VNAGLVEEGRIIFKEMKESYGY------ 570
K++ ++ + ++P+ TF +L C NA + + K+ +G+
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM--------GQGKQFHGFAIKSRL 526
Query: 571 EPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSE 621
+ S ++++ + + G+++ A E+ K K D W ++S H +
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQHGQ 576
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 363 bits (932), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 353/643 (54%), Gaps = 9/643 (1%)
Query: 75 YANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTY 134
+A+ L+ + Q+F+ + ++ L+ ++K + G Y + + Y +M + TY
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 135 PFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKF 194
PFVI+S + + G+KIHA V+KLGF S V ++L+ Y+K ++ EK +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 195 KDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRI 254
+D+ S WNS+IS + G S LFK M G + D + ++ L + + S ++G+
Sbjct: 194 RDIVS-WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 255 VHCVAVVSDF-CKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSG 313
+HC AV S D+ V T++L MYSK + A+ +F+ M ++ V WN+MI Y ++G
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 314 FPKESLELLMCMV-RSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVH 372
++ M ++G + D+ T+I + + + ++ G+ +H +R G + +
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLE 368
Query: 373 NSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVE 432
+LIDMY EC L A IFD + K V+SW+S+I YV + ++ AL LF E+ +
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428
Query: 433 VDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGEL 492
D TI +ILPA +L + +H Y +K S + + ++ YA CG +E A +
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 493 FDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAG 552
F+ I KD+++WNS+I AYA HG L+++M S V P+ TF LL AC +G
Sbjct: 489 FNH--ILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISG 546
Query: 553 LVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPL 612
+V+EG F+ MK YG +P EHY M++L+GR G+ A+ +++MPF P AR+WG L
Sbjct: 547 MVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSL 606
Query: 613 LSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLK 672
L+A + H + +AE AE++ ME +N G YVLL N+YA AG+W V +++ + +G+
Sbjct: 607 LNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGIS 666
Query: 673 KTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILELEIME 715
+T S +E H F D+SH + IY +L ++ + E
Sbjct: 667 RTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGE 709
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 227/476 (47%), Gaps = 16/476 (3%)
Query: 49 QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSK 108
++IHA I L G ++ + ++LI Y LG +++VF + + + + +++
Sbjct: 150 KKIHAMVIKL-GFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLA 208
Query: 109 FGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDD- 167
G+ +L+++K+M P + + +CS + G++IH V+ ++ D
Sbjct: 209 LGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVM 268
Query: 168 VGDALVEFYIKCDGGFENEK---GMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELF-KL 223
V ++++ Y K E+ GMIQR WN +I +NG+ +F F K+
Sbjct: 269 VMTSILDMYSKYGEVSYAERIFNGMIQRNI----VAWNVMIGCYARNGRVTDAFLCFQKM 324
Query: 224 MRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLAS 283
G + D T INLL ++ L+ GR +H A+ F + + TAL+ MY +
Sbjct: 325 SEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQ 380
Query: 284 LEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSS 343
L+ A+++FD+M++K+ + WN +I+AY Q+G +LEL + S D T + + +
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPA 440
Query: 344 ISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSW 403
+ ++ G+++HA ++++ + NSL+ MY C DL ARK F+ + K VVSW
Sbjct: 441 YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSW 500
Query: 404 SSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGAL-EHVKYLHGYSM 462
+S+I Y H ++ LFSEM V + T ++L AC G + E +Y
Sbjct: 501 NSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKR 560
Query: 463 KLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGD 518
+ G++ + + G A +E I W S+++A H D
Sbjct: 561 EYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI-WGSLLNASRNHKD 615
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 363 bits (932), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 227/679 (33%), Positives = 377/679 (55%), Gaps = 18/679 (2%)
Query: 37 SLLNLCENPQHLQ---QIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITS 93
+LL C + ++ ++H+ + L G H + + L+ YA LS ++++F+
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKL-GYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 94 P-NSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFIS--- 149
+++L+ +IL + S G+ +TL ++++M + PA ++Y V +C D S
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTG--PAPNSYTIVSALTAC--DGFSYAK 301
Query: 150 -GEKIHAQVVKLGFDSFD-DVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISL 207
G++IHA V+K S + V +AL+ Y +C + E+ + Q D+ + WNSLI
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT-WNSLIKG 360
Query: 208 AVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKD 267
VQN +++ E F M G + D ++ +++ ++ L +L G +H + + +
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420
Query: 268 LSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVR 327
L V L+ MYSK F +M DKD + W +I+ Y Q+ E+LEL + +
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480
Query: 328 SGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNC 387
D + + + S +K++ K++H ++LR G + N L+D+Y +C ++
Sbjct: 481 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGY 539
Query: 388 ARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVN 447
A ++F+S+K K VVSW+SMI + EA+ LF M G+ D V ++ IL A +
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 448 IGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWN 507
+ AL + +H Y ++ G S+ A+ YA CG ++ A +FD +I+ K ++ +
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFD--RIERKGLLQYT 657
Query: 508 SMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKES 567
SMI+AY HG +L+ +M+ +V PD I+FL LL AC +AGL++EGR K M+
Sbjct: 658 SMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHE 717
Query: 568 YGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAEL 627
Y EP EHY +V++LGRA + EA E VK M +P A VW LL+AC+ HSE E+ E+
Sbjct: 718 YELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEI 777
Query: 628 TAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVH 687
A++L+ +EP+N GN VL+SN++A G+WN V K+R ++ G++K PGCSWIE+ VH
Sbjct: 778 AAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVH 837
Query: 688 EFWAADQSHPQADAIYTIL 706
+F A D+SHP++ IY L
Sbjct: 838 KFTARDKSHPESKEIYEKL 856
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 284/533 (53%), Gaps = 19/533 (3%)
Query: 38 LLNLCENPQHL---QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSP 94
+L LC + + +Q+H+R + L+ L+ Y G L +++VF+ +
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 95 NSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIH 154
+ + T++ GE L +Y M ++ + ++P ++++C+ L D SG ++H
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 155 AQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR-----WNSLISLAV 209
+ +VKLG+ S + +ALV Y K D + +R F + + WNS++S
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKND-----DLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 210 QNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHC-VAVVSDFCKDL 268
+GKS ++ ELF+ M M G +S T+++ L + +LG+ +H V S +L
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 269 SVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRS 328
V AL++MY++ + A+ + +M++ D V WN +I Y Q+ KE+LE M+ +
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 329 GFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNC- 387
G ++D + + +++ + N+ G ++HA V+++G D + V N+LIDMY +C +L C
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC-NLTCY 439
Query: 388 ARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVN 447
+ F + K ++SW+++I GY +D +EAL LF ++ + +E+D + + +IL A
Sbjct: 440 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 499
Query: 448 IGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWN 507
+ ++ VK +H + ++ GL N + + Y KC + A +F E I KD+++W
Sbjct: 500 LKSMLIVKEIHCHILRKGLLDTVIQNELVDV-YGKCRNMGYATRVF--ESIKGKDVVSWT 556
Query: 508 SMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRII 560
SMIS+ A +G+ S+ +L+ +M ++ + D + L +L+A + + +GR I
Sbjct: 557 SMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREI 609
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 361 bits (927), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 204/654 (31%), Positives = 366/654 (55%), Gaps = 4/654 (0%)
Query: 56 IILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKT 115
I+ G +L + + L+D Y+ +GLL+ ++QVF+ + + + + +++ S G YE+
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 116 LLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEF 175
L +Y ++ + P T V+ + LL G+ +H +K G +S V + LV
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 176 YIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGT 235
Y+K + + + +D S +N++I ++ E+S +F L ++ + D T
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVS-YNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLT 309
Query: 236 LINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMS 295
+ ++LR+ L+ L L + ++ + + F + +V L+ +Y+K + A+ +F+ M
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 296 DKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQ 355
KD V WN +IS Y QSG E+++L M+ +AD T + +S + + ++++GK
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 356 MHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQ 415
+H+N +++G +SV N+LIDMY +C ++ + KIF S+ T V+W+++I V
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Query: 416 SLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTA 475
L++ ++M+ V D T + LP C ++ A K +H ++ G S + A
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549
Query: 476 IFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVR 535
+ Y+KCGC+E + +F E++ +D++TW MI AY +G+ + + + M++S +
Sbjct: 550 LIEMYSKCGCLENSSRVF--ERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Query: 536 PDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARE 595
PD + F+ ++ AC ++GLV+EG F++MK Y +P EHYA +V+LL R+ + +A E
Sbjct: 608 PDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEE 667
Query: 596 LVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGK 655
++ MP KPDA +W +L AC+ + E AE + ++I + P++ G +L SN YAA K
Sbjct: 668 FIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRK 727
Query: 656 WNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGIL 709
W+ V+ +R L+D+ + K PG SWIE+GK VH F + D S PQ++AIY L IL
Sbjct: 728 WDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 176/618 (28%), Positives = 323/618 (52%), Gaps = 13/618 (2%)
Query: 39 LNLCENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSIT-SPNSL 97
L+ N L++IHA I L GL + S LID Y++ + S VF ++ + N
Sbjct: 14 LSSSSNLNELRRIHALVISL-GLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 98 LYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQV 157
L+ +I++ SK G + + L Y ++ + P + T+P VI++C+ L D G+ ++ Q+
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 158 VKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKS 217
+ +GF+S VG+ALV+ Y + + + +DL S WNSLIS +G E++
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS-WNSLISGYSSHGYYEEA 191
Query: 218 FELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSM 277
E++ ++ DS T+ ++L + L ++ G+ +H A+ S + VN L++M
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 278 YSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTA 337
Y K DA+ +FD+M +D V +N MI Y + +ES+ + + + F+ DL T
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTV 310
Query: 338 IAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKT 397
+ + + ++++ K ++ +L+ G + +V N LID+Y +C D+ AR +F+S++
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 398 KTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYL 457
K VSW+S+I GY+ +EA++LF M + + D +T + ++ + L+ K L
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 458 HGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHG 517
H +K G+ SV+ A+ YAKCG + + ++F + + D +TWN++ISA + G
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIF--SSMGTGDTVTWNTVISACVRFG 488
Query: 518 DWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHY 577
D++ ++ TQM++S+V PD+ TFL L C + G+ I + +GYE +
Sbjct: 489 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIG 547
Query: 578 ASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEP 637
+++ + + G ++ + + + M + D W ++ A M+ E E A E ME
Sbjct: 548 NALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGEKA---LETFADMEK 603
Query: 638 EN--AGNYVLLSNIYAAA 653
+ V ++ IYA +
Sbjct: 604 SGIVPDSVVFIAIIYACS 621
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 248/487 (50%), Gaps = 15/487 (3%)
Query: 135 PFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQ--R 192
PF+ R+ S + +IHA V+ LG DS D L++ Y F + R
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKY----SHFREPASSLSVFR 63
Query: 193 KFKDLKS--RWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLE 250
+ K+ WNS+I +NG ++ E + +R D T +++++ L E
Sbjct: 64 RVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 251 LGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYY 310
+G +V+ + F DL V AL+ MYS++ L A+ +FD+M +D V WN +IS Y
Sbjct: 124 MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 311 QSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVS 370
G+ +E+LE+ + S D FT + + + + ++ G+ +H L++G + V
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 371 VHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEG 430
V+N L+ MY + AR++FD + + VS+++MI GY+ + E++R+F E L+
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQ 302
Query: 431 VEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAG 490
+ D +T+ ++L AC ++ L KY++ Y +K G S+V + YAKCG + A
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 491 ELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVN 550
++F+ ++ KD ++WNS+IS Y + GD + KL+ M + + D IT+L L++
Sbjct: 363 DVFNS--MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR 420
Query: 551 AGLVEEGRIIFKE-MKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVW 609
++ G+ + +K + S + +++++ + G + ++ ++ M D W
Sbjct: 421 LADLKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMG-TGDTVTW 477
Query: 610 GPLLSAC 616
++SAC
Sbjct: 478 NTVISAC 484
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 360 bits (925), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 221/671 (32%), Positives = 361/671 (53%), Gaps = 9/671 (1%)
Query: 49 QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITS-PNSLLYGTILKNLS 107
+QIH +++ + L + L + LID Y GL + +VF I N +L+ ++
Sbjct: 190 KQIHG-FMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFG 248
Query: 108 KFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDD 167
G E +L +Y S+ ++ + +CS + G +IH VVK+G +
Sbjct: 249 GSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY 308
Query: 168 VGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR-WNSLISLAVQNGKSEKSFELFKLMRM 226
V +L+ Y KC G E + D + WN++++ +N + +LF MR
Sbjct: 309 VCTSLLSMYSKC--GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 227 EGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLED 286
+ DS TL N++ L G+ VH ++ +ALL++YSK D
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPD 426
Query: 287 AKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRS--GFRADLFTAIAAVSSI 344
A ++F M +KD V W +IS ++G KE+L++ M + D + ++
Sbjct: 427 AYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC 486
Query: 345 STMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWS 404
+ ++ + +G Q+H ++++ G V V +SLID+Y +C A K+F S+ T+ +V+W+
Sbjct: 487 AGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWN 546
Query: 405 SMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKL 464
SMI Y ++ ++ LF+ M +G+ D V+I ++L A + +L K LHGY+++L
Sbjct: 547 SMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRL 606
Query: 465 GLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFK 524
G+ S + + A+ Y KCG + A +F +K+ K +ITWN MI Y HGD
Sbjct: 607 GIPSDTHLKNALIDMYVKCGFSKYAENIF--KKMQHKSLITWNLMIYGYGSHGDCITALS 664
Query: 525 LYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLL 584
L+ +MK++ PD +TFL L++AC ++G VEEG+ IF+ MK+ YG EP+ EHYA+MV+LL
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLL 724
Query: 585 GRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYV 644
GRAG ++EA +K MP + D+ +W LLSA + H EL L+AEKL+ MEPE YV
Sbjct: 725 GRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYV 784
Query: 645 LLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYT 704
L N+Y AG N AK+ ++++GL K PGCSWIE+ + F++ S P I+
Sbjct: 785 QLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFN 844
Query: 705 ILGILELEIME 715
+L L+ +++
Sbjct: 845 VLNRLKSNMVD 855
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 142/601 (23%), Positives = 285/601 (47%), Gaps = 31/601 (5%)
Query: 24 NQTRPHMTATHSF-SLLNLCE---NPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLG 79
+ + P T+ +F SLL C N + + IH ++L G + ++++L++ Y G
Sbjct: 51 DGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVL-GWRYDPFIATSLVNMYVKCG 109
Query: 80 LLSLSQQVFNS-------ITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAED 132
L + QVF+ +++ + ++ +++ KF +++ + +++M + + P
Sbjct: 110 FLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAF 169
Query: 133 TYPFVIRSCSCLLDFI--SGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMI 190
+ V+ +F G++IH +++ D+ + AL++ Y K + + +
Sbjct: 170 SLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFV 229
Query: 191 QRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLE 250
+ + K WN +I +G E S +L+ L + + S + L + + ++
Sbjct: 230 EIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSG 289
Query: 251 LGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYY 310
GR +HC V D V T+LLSMYSK + +A+ +F + DK +WN M++AY
Sbjct: 290 FGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 311 QSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVS 370
++ + +L+L M + D FT +S S + +GK +HA + + +
Sbjct: 350 ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST 409
Query: 371 VHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMK--L 428
+ ++L+ +Y +C A +F S++ K +V+W S+I G + + EAL++F +MK
Sbjct: 410 IESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD 469
Query: 429 EGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEM 488
+ ++ D + ++ AC + AL +HG +K GL V +++ Y+KCG EM
Sbjct: 470 DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM 529
Query: 489 AGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTAC 548
A ++F + +++++ WNSMIS Y+++ L+ M + PD ++ +L A
Sbjct: 530 ALKVF--TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAI 587
Query: 549 VNAGLVEEGRIIFKEMKESYGYE-----PSQEHYA-SMVNLLGRAGHMDEARELVKDMPF 602
+ + +G K +GY PS H +++++ + G A + K M
Sbjct: 588 SSTASLLKG-------KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH 640
Query: 603 K 603
K
Sbjct: 641 K 641
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 12/297 (4%)
Query: 328 SGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNC 387
S F +FT + + + S + N+ +GK +H +V+ G Y + SL++MY +C L+
Sbjct: 54 SPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDY 113
Query: 388 ARKIFD-------SVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIIN 440
A ++FD V + V W+SMI GY + E + F M + GV D ++
Sbjct: 114 AVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSI 173
Query: 441 ILPACVNIGAL--EHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKI 498
++ G E K +HG+ ++ L++ S + TA+ Y K G A +F E +
Sbjct: 174 VVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIE- 232
Query: 499 DSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGR 558
D +++ WN MI + G LY K + V+ +F G L AC + GR
Sbjct: 233 DKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGR 292
Query: 559 IIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSA 615
I ++ + G S++++ + G + EA E V +W +++A
Sbjct: 293 QIHCDVVK-MGLHNDPYVCTSLLSMYSKCGMVGEA-ETVFSCVVDKRLEIWNAMVAA 347
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 206/677 (30%), Positives = 369/677 (54%), Gaps = 13/677 (1%)
Query: 37 SLLNLCENPQHLQQIHARYIILHGLHQNL----ILSSNLIDSYANLGLLSLSQQVFNSIT 92
SL+ C + + L Q R I H L+ N IL+++++ Y G L +++VF+ +
Sbjct: 72 SLICACSSSRSLAQ--GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 93 SPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEK 152
N + Y +++ S+ G+ + + +Y +M + + P + + +I++C+ D G++
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 153 IHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNG 212
+HAQV+KL S +AL+ Y++ + + + KDL S W+S+I+ Q G
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLIS-WSSIIAGFSQLG 248
Query: 213 KSEKSFELFKLMRMEGAEFDSGTLI--NLLRSTVELKSLELGRIVHCVAVVSDFCKDLSV 270
++ K M G F I + L++ L + G +H + + S+ +
Sbjct: 249 FEFEALSHLKEMLSFGV-FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 271 NTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGF 330
+L MY++ L A+ +FD++ D WN++I+ +G+ E++ + M SGF
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGF 367
Query: 331 RADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARK 390
D + + + + + + G Q+H+ +++ G ++V NSL+ MY C DL C
Sbjct: 368 IPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFN 427
Query: 391 IFDSVKTKT-VVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIG 449
+F+ + VSW++++ + H+Q +E LRLF M + E D +T+ N+L CV I
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEIS 487
Query: 450 ALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSM 509
+L+ +H YS+K GL + + YAKCG + A +FD +D++D+++W+++
Sbjct: 488 SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD--SMDNRDVVSWSTL 545
Query: 510 ISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYG 569
I YA+ G + L+ +MK + + P+ +TF+G+LTAC + GLVEEG ++ M+ +G
Sbjct: 546 IVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHG 605
Query: 570 YEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTA 629
P++EH + +V+LL RAG ++EA + +M +PD VW LLSACK LA+ A
Sbjct: 606 ISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAA 665
Query: 630 EKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEF 689
E ++ ++P N+ +VLL +++A++G W A +R+ ++ +KK PG SWIEI +H F
Sbjct: 666 ENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIF 725
Query: 690 WAADQSHPQADAIYTIL 706
+A D HP+ D IYT+L
Sbjct: 726 FAEDIFHPERDDIYTVL 742
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 224/482 (46%), Gaps = 5/482 (1%)
Query: 133 TYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQR 192
TY +I +CS G KIH ++ + + ++ Y KC G + + +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKC-GSLRDAREVFDF 127
Query: 193 KFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELG 252
+ + S+I+ QNG+ ++ L+ M E D +++++ + LG
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 253 RIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQS 312
+ +H + + L AL++MY + + DA +F + KD + W+ +I+ + Q
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 313 GFPKESLELLMCMVRSG-FRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSV 371
GF E+L L M+ G F + + +++ + S++ ++G Q+H +++
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 372 HNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGV 431
SL DMY C LN AR++FD ++ SW+ +I G + + EA+ +FS+M+ G
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGF 367
Query: 432 EVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGE 491
D +++ ++L A AL +H Y +K G + +V ++ Y C +
Sbjct: 368 IPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFN 427
Query: 492 LFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNA 551
LF++ + ++ D ++WN++++A +H + +L+ M S+ PD IT LL CV
Sbjct: 428 LFEDFR-NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 552 GLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGP 611
++ G + ++ G P Q ++++ + G + +AR + M + D W
Sbjct: 487 SSLKLGSQVHCYSLKT-GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR-DVVSWST 544
Query: 612 LL 613
L+
Sbjct: 545 LI 546
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 198/408 (48%), Gaps = 6/408 (1%)
Query: 235 TLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKM 294
T I+L+ + +SL GR +H + S+ D +N +LSMY K SL DA+ +FD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 295 SDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGK 354
+++ V + +I+ Y Q+G E++ L + M++ D F + + + ++ ++ GK
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 355 QMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHD 414
Q+HA V++ S + N+LI MY ++ A ++F + K ++SWSS+I G+
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 415 QSLEALRLFSEMKLEGV-EVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVN 473
EAL EM GV + + L AC ++ ++ +HG +K L +
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 474 TAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSD 533
++ YA+CG + A +FD+ I+ D +WN +I+ A +G + +++QM+ S
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQ--IERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 534 VRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEA 593
PD I+ LL A + +G I + + +G+ S++ + +
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 594 RELVKDMPFKPDARVWGPLLSACKMHSE-TELAELTAEKLIS-MEPEN 639
L +D D+ W +L+AC H + E+ L L+S EP++
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 156/323 (48%), Gaps = 10/323 (3%)
Query: 297 KDRVVWNIMISAYYQSGFPKESLELL-MCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQ 355
K + N I++ +S F +E+LE S F+ L T I+ + + S+ +++ G++
Sbjct: 29 KTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRK 88
Query: 356 MHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQ 415
+H ++L + Y ++N ++ MY +C L AR++FD + + +VS++S+I GY + Q
Sbjct: 89 IHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQ 148
Query: 416 SLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTA 475
EA+RL+ +M E + D +I+ AC + + K LH +KL +S A
Sbjct: 149 GAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNA 208
Query: 476 IFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDV- 534
+ Y + + A +F I KD+I+W+S+I+ +++ G + +M V
Sbjct: 209 LIAMYVRFNQMSDASRVF--YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 535 RPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYA--SMVNLLGRAGHMDE 592
P+ F L AC + + G I +S E + A S+ ++ R G ++
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS---ELAGNAIAGCSLCDMYARCGFLNS 323
Query: 593 ARELVKDMPFKPDARVWGPLLSA 615
AR V D +PD W +++
Sbjct: 324 ARR-VFDQIERPDTASWNVIIAG 345
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 214/700 (30%), Positives = 364/700 (52%), Gaps = 29/700 (4%)
Query: 38 LLNLC---ENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSP 94
+L +C E+ QIH ++ G +++ +S L+D YA S +VF I
Sbjct: 186 ILKVCSFLEDTSLGMQIHG-IVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK 244
Query: 95 NSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIH 154
NS+ + I+ + L +K+M + ++ Y V+RSC+ L + G ++H
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLH 304
Query: 155 AQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKS 214
A +K F + V A ++ Y KCD ++ + + + +N++I+ Q
Sbjct: 305 AHALKSDFAADGIVRTATLDMYAKCDN-MQDAQILFDNSENLNRQSYNAMITGYSQEEHG 363
Query: 215 EKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTAL 274
K+ LF + G FD +L + R+ +K L G ++ +A+ S D+ V A
Sbjct: 364 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA 423
Query: 275 LSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADL 334
+ MY K +L +A +FD+M +D V WN +I+A+ Q+G E+L L + M+RS D
Sbjct: 424 IDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 483
Query: 335 FTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDS 394
FT ++ T ++ +G ++H++++++G SV SLIDMY +C + A KI
Sbjct: 484 FT-FGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Query: 395 VKTKT--------------------VVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVD 434
+ VSW+S+I GYV +QS +A LF+ M G+ D
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 435 FVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFD 494
T +L C N+ + K +H +K L S + + + Y+KCG + + +F
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF- 661
Query: 495 EEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLV 554
EK +D +TWN+MI YA HG + +L+ +M +++P+ +TF+ +L AC + GL+
Sbjct: 662 -EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 720
Query: 555 EEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLS 614
++G F MK YG +P HY++MV++LG++G + A EL+++MPF+ D +W LL
Sbjct: 721 DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Query: 615 ACKMH-SETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKK 673
C +H + E+AE L+ ++P+++ Y LLSN+YA AG W V+ +R +R LKK
Sbjct: 781 VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 840
Query: 674 TPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILELEI 713
PGCSW+E+ +H F D++HP+ + IY LG++ E+
Sbjct: 841 EPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEM 880
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 169/642 (26%), Positives = 307/642 (47%), Gaps = 50/642 (7%)
Query: 63 QNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQM 122
++++ + +I+ Y+ + + FN + + + + ++L + GE K++ V+ M
Sbjct: 112 RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 171
Query: 123 ALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGG 182
+ + T+ +++ CS L D G +IH VV++G D+ AL++ Y K
Sbjct: 172 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRF 231
Query: 183 FENEKGMIQRKFKDLKSR----WNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLIN 238
E+ R F+ + + W+++I+ VQN + + FK M+ A +
Sbjct: 232 VES-----LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYAS 286
Query: 239 LLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKD 298
+LRS L L LG +H A+ SDF D V TA L MY+K +++DA++LFD + +
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346
Query: 299 RVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHA 358
R +N MI+ Y Q ++L L ++ SG D + + + +K + G Q++
Sbjct: 347 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 406
Query: 359 NVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLE 418
+++ V V N+ IDMY +C+ L A ++FD ++ + VSW+++I + + + E
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 466
Query: 419 ALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFI 478
L LF M +E D T +IL AC G+L + +H +K G+ S SSV ++
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLID 525
Query: 479 SYAKCGCIEMA--------------GELFDEEKIDSKDI----ITWNSMISAYAKHGDWS 520
Y+KCG IE A G + + EK+ +K + ++WNS+IS Y
Sbjct: 526 MYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSE 585
Query: 521 QCFKLYTQMKQSDVRPDLITFLGLLTACVN---AGLVEE--GRIIFKEMKESYGYEPSQE 575
L+T+M + + PD T+ +L C N AGL ++ ++I KE++ Y S
Sbjct: 586 DAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV-YICS-- 642
Query: 576 HYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLI-- 633
++V++ + G + ++R L+ + + D W ++ H + E A E++I
Sbjct: 643 ---TLVDMYSKCGDLHDSR-LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 698
Query: 634 SMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFL----RDRGL 671
+++P N+V +I A + K + RD GL
Sbjct: 699 NIKP----NHVTFISILRACAHMGLIDKGLEYFYMMKRDYGL 736
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/557 (24%), Positives = 260/557 (46%), Gaps = 29/557 (5%)
Query: 74 SYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDT 133
SY + S N + S ++ + + K +K G E + M + P
Sbjct: 26 SYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPT--- 82
Query: 134 YPFVIRSCSCLL-------DFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENE 186
FV+ +CLL DF+S + ++ S++ ++ Y K + F+
Sbjct: 83 -TFVL---NCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNK----MINGYSKSNDMFKAN 134
Query: 187 KGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVEL 246
+D+ S WNS++S +QNG+S KS E+F M EG EFD T +L+ L
Sbjct: 135 SFFNMMPVRDVVS-WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFL 193
Query: 247 KSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMI 306
+ LG +H + V D+ +ALL MY+K ++ +F + +K+ V W+ +I
Sbjct: 194 EDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAII 253
Query: 307 SAYYQSGFPKESLELL--MCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNG 364
+ Q+ +L+ M V +G ++ ++ + S + + + G Q+HA+ L++
Sbjct: 254 AGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV--LRSCAALSELRLGGQLHAHALKSD 311
Query: 365 SDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFS 424
V + +DMY +C+++ A+ +FD+ + S+++MI GY + +AL LF
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 425 EMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCG 484
+ G+ D +++ + AC + L ++G ++K L+ V A Y KC
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 431
Query: 485 CIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGL 544
+ A +FDE + +D ++WN++I+A+ ++G + L+ M +S + PD TF +
Sbjct: 432 ALAEAFRVFDEMR--RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSI 489
Query: 545 LTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKP 604
L AC G + G I + +S G + S++++ + G ++EA ++ F
Sbjct: 490 LKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI--HSRFFQ 545
Query: 605 DARVWGPLLSACKMHSE 621
A V G + KMH++
Sbjct: 546 RANVSGTMEELEKMHNK 562
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 352 bits (904), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 205/619 (33%), Positives = 326/619 (52%), Gaps = 73/619 (11%)
Query: 154 HAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGK 213
HA+++K G + + L+ Y + F + ++Q ++SLI +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNC-FNDADLVLQSIPDPTIYSFSSLIYALTKAKL 96
Query: 214 SEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTA 273
+S +F M G DS L NL + EL + ++G+ +HCV+ VS D V +
Sbjct: 97 FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 274 LLSMYSKLASLEDAKMLFDKMSDKDRVV-------------------------------- 301
+ MY + + DA+ +FD+MSDKD V
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 302 ---WNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHA 358
WN ++S + +SG+ KE++ + + GF D T + + S+ + + G+ +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 359 NVLRNGSDYQVSVHNSLIDMY-----------------------CECEDLNCAR------ 389
V++ G V +++IDMY C +R
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 390 --KIFDSVKTKT----VVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILP 443
++F+ K +T VVSW+S+I G + + +EAL LF EM++ GV+ + VTI ++LP
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 444 ACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDI 503
AC NI AL H + HG+++++ L V +A+ YAKCG I ++ +F+ + +K++
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN--MMPTKNL 454
Query: 504 ITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKE 563
+ WNS+++ ++ HG + ++ + ++ ++PD I+F LL+AC GL +EG FK
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 564 MKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETE 623
M E YG +P EHY+ MVNLLGRAG + EA +L+K+MPF+PD+ VWG LL++C++ + +
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 624 LAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIG 683
LAE+ AEKL +EPEN G YVLLSNIYAA G W V +R + GLKK PGCSWI++
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 684 KLVHEFWAADQSHPQADAI 702
V+ A D+SHPQ D I
Sbjct: 635 NRVYTLLAGDKSHPQIDQI 653
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/533 (21%), Positives = 225/533 (42%), Gaps = 72/533 (13%)
Query: 50 QIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKF 109
Q HAR I+ G + +S+ LI SY+N + + V SI P + +++ L+K
Sbjct: 36 QAHAR-ILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 110 GEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVG 169
+ +++ V+ +M + P P + + C+ L F G++IH G D V
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 170 DALVEFYIKCDGGFENEKGMIQRKFKDLKS------------------------------ 199
++ Y++C + K + KD+ +
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 200 ----RWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIV 255
WN ++S ++G +++ +F+ + G D T+ ++L S + + L +GR++
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 256 HCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDK--------------------MS 295
H + KD V +A++ MY K + LF++ +
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 296 DK---------------DRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAA 340
DK + V W +I+ Q+G E+LEL M +G + + T +
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 341 VSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTV 400
+ + + + G+ H +R V V ++LIDMY +C +N ++ +F+ + TK +
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 401 VSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGAL-EHVKYLHG 459
V W+S++ G+ H ++ E + +F + ++ DF++ ++L AC +G E KY
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 460 YSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISA 512
S + G+ + + + G ++ A +L E + D W +++++
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEP-DSCVWGALLNS 566
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 123/240 (51%), Gaps = 3/240 (1%)
Query: 355 QMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHD 414
Q HA +L++G+ + LI Y N A + S+ T+ S+SS+I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 415 QSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNT 474
+++ +FS M G+ D + N+ C + A + K +H S GL+ + V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 475 AIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDV 534
++F Y +CG + A ++FD ++ KD++T ++++ AYA+ G + ++ ++M+ S +
Sbjct: 156 SMFHMYMRCGRMGDARKVFD--RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 535 RPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEAR 594
+++++ G+L+ +G +E ++F+++ G+ P Q +S++ +G + ++ R
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHH-LGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 39/226 (17%)
Query: 37 SLLNLCENPQ---HLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITS 93
S+L C N H + H + +H L N+ + S LID YA G ++LSQ VFN + +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 94 PNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKI 153
N + + +++ S G+ ++ + +++ + + P DFIS +
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP----------------DFISFTSL 495
Query: 154 HAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQR-KFKDLKSRWNSLISLAVQNG 212
+ ++G D G++ K M + K ++ +++L + G
Sbjct: 496 LSACGQVGLT----------------DEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539
Query: 213 KSEKSFELFKLMRMEGAEFDSGTLIN--LLRSTVELKSLELGRIVH 256
K +++++L K M E G L+N L++ V+L + ++ H
Sbjct: 540 KLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFH 585
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 352 bits (902), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 187/574 (32%), Positives = 326/574 (56%), Gaps = 18/574 (3%)
Query: 151 EKIHAQVVKLG--FDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNSL 204
++IHA+++ LG F F L+ I F + ++ F DL WN++
Sbjct: 38 KQIHARLLVLGLQFSGF------LITKLIHASSSF-GDITFARQVFDDLPRPQIFPWNAI 90
Query: 205 ISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDF 264
I +N + + ++ M++ DS T +LL++ L L++GR VH F
Sbjct: 91 IRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF 150
Query: 265 CKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVV--WNIMISAYYQSGFPKESLELL 322
D+ V L+++Y+K L A+ +F+ + +R + W ++SAY Q+G P E+LE+
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 323 MCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCEC 382
M + + D ++ +++ + +++++ G+ +HA+V++ G + + + SL MY +C
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270
Query: 383 EDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINIL 442
+ A+ +FD +K+ ++ W++MI GY + + EA+ +F EM + V D ++I + +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 443 PACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKD 502
AC +G+LE + ++ Y + +++A+ +AKCG +E A +FD + +D
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD--RTLDRD 388
Query: 503 IITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFK 562
++ W++MI Y HG + LY M++ V P+ +TFLGLL AC ++G+V EG F
Sbjct: 389 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFN 448
Query: 563 EMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSET 622
M + + P Q+HYA +++LLGRAGH+D+A E++K MP +P VWG LLSACK H
Sbjct: 449 RMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHV 507
Query: 623 ELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEI 682
EL E A++L S++P N G+YV LSN+YAAA W+ VA++R ++++GL K GCSW+E+
Sbjct: 508 ELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 567
Query: 683 GKLVHEFWAADQSHPQADAIYTILGILELEIMEG 716
+ F D+SHP+ + I + +E + EG
Sbjct: 568 RGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEG 601
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 248/486 (51%), Gaps = 13/486 (2%)
Query: 37 SLLNLCENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNS 96
SL++ + L+QIHAR ++L GL + L + LI + ++ G ++ ++QVF+ + P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVL-GLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI 84
Query: 97 LLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQ 156
+ I++ S+ ++ LL+Y M L + P T+P ++++CS L G +HAQ
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 157 VVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLK------SRWNSLISLAVQ 210
V +LGFD+ V + L+ Y KC G + F+ L W +++S Q
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKC-----RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQ 199
Query: 211 NGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSV 270
NG+ ++ E+F MR + D L+++L + L+ L+ GR +H V + +
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Query: 271 NTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGF 330
+L +MY+K + AK+LFDKM + ++WN MIS Y ++G+ +E++++ M+
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
Query: 331 RADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARK 390
R D + +A+S+ + + ++E + M+ V R+ V + ++LIDM+ +C + AR
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 391 IFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGA 450
+FD + VV WS+MI GY H ++ EA+ L+ M+ GV + VT + +L AC + G
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439
Query: 451 LEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMI 510
+ + +N + + G ++ A E+ + + W +++
Sbjct: 440 VREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV-QPGVTVWGALL 498
Query: 511 SAYAKH 516
SA KH
Sbjct: 499 SACKKH 504
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 347 bits (891), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 213/649 (32%), Positives = 353/649 (54%), Gaps = 41/649 (6%)
Query: 72 IDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAE 131
I SY G + + +VF + +S+ Y ++ + GE+E ++ +M P
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM------PER 124
Query: 132 D--TYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGM 189
D ++ +I+ + ++ + + S++ + + +G ++ + +
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ-----NGCVDDARSV 179
Query: 190 IQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLIN---LLRSTVEL 246
R + WN+L+S VQN K E++ LFK ++ L++ LL V+
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK-------SRENWALVSWNCLLGGFVKK 232
Query: 247 KSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMI 306
K + R V D +S NT +++ Y++ +++A+ LFD+ +D W M+
Sbjct: 233 KKIVEARQFFDSMNVRDV---VSWNT-IITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 307 SAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVL--RNG 364
S Y Q+ +E+ EL M + + A ++ + +E K++ +V+ RN
Sbjct: 289 SGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELF-DVMPCRN- 342
Query: 365 SDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFS 424
VS N++I Y +C ++ A+ +FD + + VSW++MI GY S EALRLF
Sbjct: 343 ----VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 425 EMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCG 484
+M+ EG ++ + + L C ++ ALE K LHG +K G + V A+ + Y KCG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 485 CIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGL 544
IE A +LF E + KDI++WN+MI+ Y++HG + + MK+ ++PD T + +
Sbjct: 459 SIEEANDLFKE--MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 545 LTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKP 604
L+AC + GLV++GR F M + YG P+ +HYA MV+LLGRAG +++A L+K+MPF+P
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 605 DARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRT 664
DA +WG LL A ++H TELAE A+K+ +MEPEN+G YVLLSN+YA++G+W V K+R
Sbjct: 577 DAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 636
Query: 665 FLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILELEI 713
+RD+G+KK PG SWIEI H F D+ HP+ D I+ L L+L +
Sbjct: 637 RMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRM 685
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 222/456 (48%), Gaps = 29/456 (6%)
Query: 69 SNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMY 128
+ ++ YA G + ++ VF+ + N + + +L + + E+ +++K
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK-------- 212
Query: 129 PAEDTYPFVIRSCSCLL-DFISGEKIHAQVVKLGFDSFD--DV--GDALVEFYIKCDGGF 183
+ + + V S +CLL F+ +KI + FDS + DV + ++ Y +
Sbjct: 213 -SRENWALV--SWNCLLGGFVKKKKIVE--ARQFFDSMNVRDVVSWNTIITGYAQSGKID 267
Query: 184 ENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRST 243
E + + +D+ + W +++S +QN E++ ELF M E + + +L
Sbjct: 268 EARQLFDESPVQDVFT-WTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGY 322
Query: 244 VELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWN 303
V+ + +E+ + + V C+++S +++ Y++ + +AK LFDKM +D V W
Sbjct: 323 VQGERMEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378
Query: 304 IMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRN 363
MI+ Y QSG E+L L + M R G R + + +A+S+ + + +E GKQ+H +++
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 364 GSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLF 423
G + V N+L+ MYC+C + A +F + K +VSW++MI GY H ALR F
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 424 SEMKLEGVEVDFVTIINILPACVNIGALEHVK-YLHGYSMKLGLNSLSSVNTAIFISYAK 482
MK EG++ D T++ +L AC + G ++ + Y + + G+ S + +
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 483 CGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGD 518
G +E A L + D W +++ A HG+
Sbjct: 559 AGLLEDAHNLMKNMPFEP-DAAIWGTLLGASRVHGN 593
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 156/346 (45%), Gaps = 30/346 (8%)
Query: 293 KMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSIST-MKNIE 351
K D D WN+ IS+Y ++G E+L + M R +++++ IS ++N E
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPR-------WSSVSYNGMISGYLRNGE 110
Query: 352 WGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYV 411
+ ++ + + + N +I Y +L AR++F+ + + V SW++M+ GY
Sbjct: 111 F--ELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYA 168
Query: 412 THDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSS 471
+ +A +F M E + V+ +L A V +E L L S +
Sbjct: 169 QNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWN- 223
Query: 472 VNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQ 531
+ + K I A + FD ++ +D+++WN++I+ YA+ G + +L+ +
Sbjct: 224 ---CLLGGFVKKKKIVEARQFFDS--MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 532 SDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMD 591
DV T+ +++ + +VEE R +F +M E ++ + +M+ + M+
Sbjct: 279 QDV----FTWTAMVSGYIQNRMVEEARELFDKMPER-----NEVSWNAMLAGYVQGERME 329
Query: 592 EARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEP 637
A+EL MP + + W +++ + A+ +K+ +P
Sbjct: 330 MAKELFDVMPCR-NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 121/250 (48%), Gaps = 7/250 (2%)
Query: 63 QNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQM 122
+N+ + +I YA G +S ++ +F+ + + + + ++ S+ G + L ++ QM
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 123 ALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGG 182
+ ++ + +C+ ++ G+++H ++VK G+++ VG+AL+ Y KC G
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC-GS 459
Query: 183 FENEKGMIQR-KFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLR 241
E + + KD+ S WN++I+ ++G E + F+ M+ EG + D T++ +L
Sbjct: 460 IEEANDLFKEMAGKDIVS-WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 242 STVELKSLELGRIVHCVAVVSDF--CKDLSVNTALLSMYSKLASLEDAKMLFDKMS-DKD 298
+ ++ GR + + D+ + ++ + + LEDA L M + D
Sbjct: 519 ACSHTGLVDKGR-QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPD 577
Query: 299 RVVWNIMISA 308
+W ++ A
Sbjct: 578 AAIWGTLLGA 587
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 218/689 (31%), Positives = 363/689 (52%), Gaps = 26/689 (3%)
Query: 5 LPPAC-SLQSGHVKFLRFPANQTRPHMTATHS-FSLLNLCENPQHLQQIHARYIILHGLH 62
PP C S + L + + H A+ F LL+ C N L+Q H + +GL
Sbjct: 15 FPPRCVSFTTIKELILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHG-VLTGNGLM 73
Query: 63 QNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQM 122
++ +++ L+ Y G ++ VF+ I P+ L+ +L+ E + + +Y +
Sbjct: 74 GDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLL 133
Query: 123 ALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVG-DALVEFYIKCDG 181
+ + +++C+ L D +G+KIH Q+VK+ SFD+V L++ Y KC
Sbjct: 134 MKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKV--PSFDNVVLTGLLDMYAKC-- 189
Query: 182 GFENEKGMIQRKFKDLKSR----WNSLISLAVQNGKSEKSFELFKLMR---MEGAEFDSG 234
E + F D+ R W S+I+ V+N E+ LF MR + G E+ G
Sbjct: 190 ---GEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYG 246
Query: 235 TLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKM 294
TLI + +L +L G+ H V S + T+LL MY K + +A+ +F++
Sbjct: 247 TLI---MACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEH 303
Query: 295 SDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGK 354
S D V+W MI Y +G E+L L M + + T + +S ++N+E G+
Sbjct: 304 SHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGR 363
Query: 355 QMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHD 414
+H ++ G + +V N+L+ MY +C A+ +F+ K +V+W+S+I G+ +
Sbjct: 364 SVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNG 422
Query: 415 QSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVN- 473
EAL LF M E V + VT+ ++ AC ++G+L LH YS+KLG + SSV+
Sbjct: 423 SIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHV 482
Query: 474 -TAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQS 532
TA+ YAKCG + A +FD I+ K+ ITW++MI Y K GD +L+ +M +
Sbjct: 483 GTALLDFYAKCGDPQSARLIFD--TIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Query: 533 DVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDE 592
+P+ TF +L+AC + G+V EG+ F M + Y + PS +HY MV++L RAG +++
Sbjct: 541 QQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQ 600
Query: 593 ARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAA 652
A ++++ MP +PD R +G L C MHS +L E+ +K++ + P++A YVL+SN+YA+
Sbjct: 601 ALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYAS 660
Query: 653 AGKWNGVAKMRTFLRDRGLKKTPGCSWIE 681
G+WN ++R ++ RGL K G S +E
Sbjct: 661 DGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 347 bits (889), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 215/700 (30%), Positives = 371/700 (53%), Gaps = 20/700 (2%)
Query: 27 RPHMTATHSFSLLNLCENPQHLQQ---IHARYIILHGLHQNLILSSNLIDSYANLGLLSL 83
RP + T S SLL C + + +HAR +I + + +L ++LI Y+ G +
Sbjct: 58 RPMDSVTFS-SLLKSCIRARDFRLGKLVHAR-LIEFDIEPDSVLYNSLISLYSKSGDSAK 115
Query: 84 SQQVFNSIT---SPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRS 140
++ VF ++ + + + ++ G + V+ + + P + Y VIR+
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRA 175
Query: 141 CSCLLDFIS-GEKIHAQVVKLG-FDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLK 198
CS DF+ G ++K G F+S VG +L++ ++K + FEN + + +
Sbjct: 176 CSNS-DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234
Query: 199 SRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCV 258
W +I+ +Q G ++ F M + G E D TL ++ + EL++L LG+ +H
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSW 294
Query: 259 AVVSDFCKDLSVNTALLSMYSKLA---SLEDAKMLFDKMSDKDRVVWNIMISAYYQS-GF 314
A+ S D V +L+ MY+K + S++D + +FD+M D + W +I+ Y ++
Sbjct: 295 AIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL 352
Query: 315 PKESLELLMCMVRSG-FRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHN 373
E++ L M+ G + FT +A + + + GKQ+ + G SV N
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVAN 412
Query: 374 SLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEV 433
S+I M+ + + + A++ F+S+ K +VS+++ + G + +A +L SE+ + V
Sbjct: 413 SVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV 472
Query: 434 DFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELF 493
T ++L N+G++ + +H +KLGL+ V A+ Y+KCG I+ A +F
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVF 532
Query: 494 DEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGL 553
+ ++++++I+W SMI+ +AKHG + + + QM + V+P+ +T++ +L+AC + GL
Sbjct: 533 N--FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGL 590
Query: 554 VEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLL 613
V EG F M E + +P EHYA MV+LL RAG + +A E + MPF+ D VW L
Sbjct: 591 VSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650
Query: 614 SACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKK 673
AC++HS TEL +L A K++ ++P Y+ LSNIYA AGKW +MR +++R L K
Sbjct: 651 GACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVK 710
Query: 674 TPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILELEI 713
GCSWIE+G +H+F+ D +HP A IY L L EI
Sbjct: 711 EGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 210/696 (30%), Positives = 376/696 (54%), Gaps = 27/696 (3%)
Query: 33 THSF-SLLNLC---ENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVF 88
+H++ ++L C +P + IH I+ G +L ++ L+++Y G + +F
Sbjct: 49 SHAYGAMLRRCIQKNDPISAKAIHCD-ILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 89 NSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFI 148
+ + N++ + T+ + + + + +Y ++ + + P V S L F+
Sbjct: 108 DEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHRE----GHELNPHVFTSFLKL--FV 157
Query: 149 SGEK------IHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWN 202
S +K +H+ +VKLG+DS VG AL+ Y C G ++ + + + W
Sbjct: 158 SLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVC-GSVDSARTVFEGILCKDIVVWA 216
Query: 203 SLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVS 262
++S V+NG E S +L MRM G ++ T L++++ L + + + VH + +
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 263 DFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELL 322
+ D V LL +Y++L + DA +F++M D V W+ MI+ + Q+GF E+++L
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 323 MCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCEC 382
+ M + + FT + ++ + K G+Q+H V++ G D + V N+LID+Y +C
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 383 EDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINIL 442
E ++ A K+F + +K VSW+++I GY + +A +F E V V VT + L
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456
Query: 443 PACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKD 502
AC ++ +++ +HG ++K +V+ ++ YAKCG I+ A +F+E +++ D
Sbjct: 457 GACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNE--METID 514
Query: 503 IITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFK 562
+ +WN++IS Y+ HG Q ++ MK D +P+ +TFLG+L+ C NAGL+++G+ F+
Sbjct: 515 VASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFE 574
Query: 563 EMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSET 622
M +G EP EHY MV LLGR+G +D+A +L++ +P++P +W +LSA +
Sbjct: 575 SMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNE 634
Query: 623 ELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEI 682
E A +AE+++ + P++ YVL+SN+YA A +W VA +R +++ G+KK PG SWIE
Sbjct: 635 EFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEH 694
Query: 683 GKLVHEFWAADQSHPQADAIYTILGILELEIMEGRR 718
VH F HP + I G+LE M+ R
Sbjct: 695 QGDVHYFSVGLSDHPD---MKLINGMLEWLNMKATR 727
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 147/318 (46%), Gaps = 6/318 (1%)
Query: 231 FDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKML 290
DS +LR ++ + +HC + C DL LL+ Y K +DA L
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 291 FDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNI 350
FD+M +++ V + + Y ++ + L + R G + + + ++
Sbjct: 107 FDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 351 EWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGY 410
E +H+ +++ G D V +LI+ Y C ++ AR +F+ + K +V W+ ++ Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 411 VTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLS 470
V + ++L+L S M++ G + T L A + +GA + K +HG +K
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 471 SVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMK 530
V + Y + G + A ++F+E + D++ W+ MI+ + ++G ++ L+ +M+
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNE--MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR 340
Query: 531 QSDVRPDLITFLGLLTAC 548
++ V P+ T +L C
Sbjct: 341 EAFVVPNEFTLSSILNGC 358
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/560 (32%), Positives = 317/560 (56%), Gaps = 39/560 (6%)
Query: 201 WNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSG-TLINLLRSTVELKSLELGRIVHCVA 259
WN+LI S F M E + + T L+++ E+ SL LG+ +H +A
Sbjct: 98 WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMA 157
Query: 260 VVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESL 319
V S D+ V +L+ Y L+ A +F + +KD V WN MI+ + Q G P ++L
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 320 ELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMY 379
EL M +A T + +S+ + ++N+E+G+Q+ + + N + +++ N+++DMY
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 380 CEC-------------------------------EDLNCARKIFDSVKTKTVVSWSSMIK 408
+C ED AR++ +S+ K +V+W+++I
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 409 GYVTHDQSLEALRLFSEMKLE-GVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLN 467
Y + + EAL +F E++L+ ++++ +T+++ L AC +GALE +++H Y K G+
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 468 SLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYT 527
V +A+ Y+KCG +E + E+F+ ++ +D+ W++MI A HG ++ ++
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFN--SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFY 455
Query: 528 QMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRA 587
+M++++V+P+ +TF + AC + GLV+E +F +M+ +YG P ++HYA +V++LGR+
Sbjct: 456 KMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 588 GHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLS 647
G++++A + ++ MP P VWG LL ACK+H+ LAE+ +L+ +EP N G +VLLS
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 648 NIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILG 707
NIYA GKW V+++R +R GLKK PGCS IEI ++HEF + D +HP ++ +Y L
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 635
Query: 708 ILELEIMEGRRESSEELKFS 727
E+ME + + E + S
Sbjct: 636 ----EVMEKLKSNGYEPEIS 651
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 264/552 (47%), Gaps = 43/552 (7%)
Query: 24 NQTRPHMTATHSFSLLNLCENPQHLQQIHARYIILHGLHQNLILSSNL--IDSYANLGLL 81
NQ + + SL+ C + + L+Q H ++I G + +S L + + ++ L
Sbjct: 22 NQPTTNNERSRHISLIERCVSLRQLKQTHG-HMIRTGTFSDPYSASKLFAMAALSSFASL 80
Query: 82 SLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSM-YPAEDTYPFVIRS 140
+++VF+ I PNS + T+++ + + ++ + M +S YP + T+PF+I++
Sbjct: 81 EYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA 140
Query: 141 CSCLLDFISGEKIHAQVVK--LGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLK 198
+ + G+ +H VK +G D F V ++L+ Y C K K KD+
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVF--VANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 199 SRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCV 258
S WNS+I+ VQ G +K+ ELFK M E + T++ +L + ++++LE GR V
Sbjct: 199 S-WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 259 AVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVV----------------- 301
+ +L++ A+L MY+K S+EDAK LFD M +KD V
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 302 --------------WNIMISAYYQSGFPKESLELLM-CMVRSGFRADLFTAIAAVSSIST 346
WN +ISAY Q+G P E+L + ++ + + T ++ +S+ +
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 347 MKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSM 406
+ +E G+ +H+ + ++G V ++LI MY +C DL +R++F+SV+ + V WS+M
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 407 IKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYL-HGYSMKLG 465
I G H EA+ +F +M+ V+ + VT N+ AC + G ++ + L H G
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 466 LNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKL 525
+ I + G +E A + + I + W +++ A H + +
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSV-WGALLGACKIHANLNLAEMA 556
Query: 526 YTQMKQSDVRPD 537
T++ + + R D
Sbjct: 557 CTRLLELEPRND 568
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 201/410 (49%), Gaps = 37/410 (9%)
Query: 275 LSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMV-RSGFRAD 333
++ S ASLE A+ +FD++ + WN +I AY P S+ + MV S +
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 334 LFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFD 393
+T + + + + ++ G+ +H +++ V V NSLI Y C DL+ A K+F
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 394 SVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEH 453
++K K VVSW+SMI G+V +AL LF +M+ E V+ VT++ +L AC I LE
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 454 VKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFD--EEK-------------- 497
+ + Y + +N ++ A+ Y KCG IE A LFD EEK
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 310
Query: 498 -------------IDSKDIITWNSMISAYAKHGDWSQCFKLYTQMK-QSDVRPDLITFLG 543
+ KDI+ WN++ISAY ++G ++ ++ +++ Q +++ + IT +
Sbjct: 311 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 544 LLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFK 603
L+AC G +E GR I +K+ +G + ++++++ + G ++++RE+ + K
Sbjct: 371 TLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-K 428
Query: 604 PDARVWGPLLSACKMHSETELAELTAEKLISMEPENA-GNYVLLSNIYAA 652
D VW ++ MH + M+ N N V +N++ A
Sbjct: 429 RDVFVWSAMIGGLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 208/652 (31%), Positives = 345/652 (52%), Gaps = 20/652 (3%)
Query: 37 SLLNLCENPQHL---QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITS 93
S+L C + + L + + AR I +++ + + ++D YA G ++ + +VF+ I +
Sbjct: 256 SVLAACASLEKLRFGKVVQARVIKCGA--EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 94 PNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKI 153
P+ + + +L +K + L ++K+M + T VI +C ++
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Query: 154 HAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDL-----KSRWNSLISLA 208
HA V K GF V AL+ Y K + + ++ F+DL ++ N +I+
Sbjct: 374 HAWVFKSGFYLDSSVAAALISMYSK-----SGDIDLSEQVFEDLDDIQRQNIVNVMITSF 428
Query: 209 VQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDL 268
Q+ K K+ LF M EG D ++ +LL L L LG+ VH + S DL
Sbjct: 429 SQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDL 485
Query: 269 SVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRS 328
+V ++L ++YSK SLE++ LF + KD W MIS + + G+ +E++ L M+
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD 545
Query: 329 GFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCA 388
G D T A ++ S+ ++ GK++H LR G D + + ++L++MY +C L A
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 389 RKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNI 448
R+++D + VS SS+I GY H + LF +M + G +D I +IL A
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 449 GALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNS 508
+H Y K+GL + SV +++ Y+K G I+ + F + I+ D+I W +
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQ--INGPDLIAWTA 723
Query: 509 MISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESY 568
+I++YA+HG ++ ++Y MK+ +PD +TF+G+L+AC + GLVEE M + Y
Sbjct: 724 LIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDY 783
Query: 569 GYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELT 628
G EP HY MV+ LGR+G + EA + +M KPDA VWG LL+ACK+H E EL ++
Sbjct: 784 GIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVA 843
Query: 629 AEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWI 680
A+K I +EP +AG Y+ LSNI A G+W+ V + R ++ G++K PG S +
Sbjct: 844 AKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/566 (25%), Positives = 285/566 (50%), Gaps = 18/566 (3%)
Query: 41 LCENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYG 100
LC N + + + A + + L ++ L+ +L+ Y+N G ++ + ++F++I P+ +
Sbjct: 61 LC-NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCN 119
Query: 101 TILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKL 160
++ + +E++L + +M E +Y VI +CS L + E + +K+
Sbjct: 120 IMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKM 179
Query: 161 GFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFEL 220
G+ ++ V AL++ + K + FE+ + + WN++I+ A++N F+L
Sbjct: 180 GYFFYEVVESALIDVFSK-NLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 221 FKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSK 280
F M + + DS T ++L + L+ L G++V V+ +D+ V TA++ +Y+K
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQ-ARVIKCGAEDVFVCTAIVDLYAK 297
Query: 281 LASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAA 340
+ +A +F ++ + V W +M+S Y +S +LE+ M SG + T +
Sbjct: 298 CGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSV 357
Query: 341 VSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIF---DSVKT 397
+S+ + Q+HA V ++G SV +LI MY + D++ + ++F D ++
Sbjct: 358 ISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQR 417
Query: 398 KTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPA--CVNIGALEHVK 455
+ +V + MI + + +A+RLF+ M EG+ D ++ ++L C+N+G K
Sbjct: 418 QNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG-----K 470
Query: 456 YLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAK 515
+HGY++K GL +V +++F Y+KCG +E + +LF + I KD W SMIS + +
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLF--QGIPFKDNACWASMISGFNE 528
Query: 516 HGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQE 575
+G + L+++M PD T +LT C + + G+ I + G + +
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA-GIDKGMD 587
Query: 576 HYASMVNLLGRAGHMDEARELVKDMP 601
+++VN+ + G + AR++ +P
Sbjct: 588 LGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 134/279 (48%), Gaps = 16/279 (5%)
Query: 343 SISTMKNIEWGKQMHANVLRNGS-DYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVV 401
S S + N+ K + A++LR + V + SL+ Y + A K+FD++ VV
Sbjct: 57 SNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVV 116
Query: 402 SWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYS 461
S + MI GY H E+LR FS+M G E + ++ +++ AC + A + + ++
Sbjct: 117 SCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHT 176
Query: 462 MKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQ 521
+K+G V +A+ ++K E A ++F + S ++ WN++I+ ++ ++
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSL--SANVYCWNTIIAGALRNQNYGA 234
Query: 522 CFKLYTQMKQSDVRPDLITFLGLLTACVNA-----GLVEEGRIIFKEMKESYGYEPSQEH 576
F L+ +M +PD T+ +L AC + G V + R+I ++ +
Sbjct: 235 VFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVF-------V 287
Query: 577 YASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSA 615
++V+L + GHM EA E+ +P P W +LS
Sbjct: 288 CTAIVDLYAKCGHMAEAMEVFSRIP-NPSVVSWTVMLSG 325
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 215/679 (31%), Positives = 371/679 (54%), Gaps = 12/679 (1%)
Query: 37 SLLNLCENP-QHLQ---QIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSIT 92
S+L C +HL ++H R II G+ + ++ ++L+ Y G LS +++VF+ +
Sbjct: 105 SVLRACAGSREHLSVGGKVHGR-IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMP 163
Query: 93 SPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEK 152
+ + + T++ + + GE K L ++K M + P T V+ C+ L
Sbjct: 164 VRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARS 223
Query: 153 IHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNG 212
+H Q+ + FD + + ++L+ Y KC +E+ + ++ K W ++IS +
Sbjct: 224 VHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSER-IFEKIAKKNAVSWTAMISSYNRGE 282
Query: 213 KSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDL-SVN 271
SEK+ F M G E + TL ++L S + + G+ VH AV + + S++
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 342
Query: 272 TALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFR 331
AL+ +Y++ L D + + +SD++ V WN +IS Y G ++L L MV +
Sbjct: 343 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 332 ADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKI 391
D FT +++S+ + GKQ+H +V+R + V NSLIDMY + ++ A +
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTV 461
Query: 392 FDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGAL 451
F+ +K ++VV+W+SM+ G+ + S+EA+ LF M +E++ VT + ++ AC +IG+L
Sbjct: 462 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 521
Query: 452 EHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMIS 511
E K++H + GL L + +TA+ YAKCG + A +F + S+ I++W+SMI+
Sbjct: 522 EKGKWVHHKLIISGLKDLFT-DTALIDMYAKCGDLNAAETVF--RAMSSRSIVSWSSMIN 578
Query: 512 AYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYE 571
AY HG + QM +S +P+ + F+ +L+AC ++G VEEG+ F MK S+G
Sbjct: 579 AYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK-SFGVS 637
Query: 572 PSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEK 631
P+ EH+A ++LL R+G + EA +K+MPF DA VWG L++ C++H + ++ +
Sbjct: 638 PNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKND 697
Query: 632 LISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWA 691
L + ++ G Y LLSNIYA G+W ++R+ ++ LKK PG S IEI + V F A
Sbjct: 698 LSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGA 757
Query: 692 ADQSHPQADAIYTILGILE 710
+++ Q D IY LG L+
Sbjct: 758 GEENRIQTDEIYRFLGNLQ 776
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/645 (24%), Positives = 325/645 (50%), Gaps = 29/645 (4%)
Query: 33 THSFSLLNLCENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSIT 92
T L C + + + Q+HA ++ L ++ + + LI+SYA +G S+ VF +
Sbjct: 2 TQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFP 61
Query: 93 SPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFIS-GE 151
P+S +YG ++K + + +Y ++ ++ ++ +P V+R+C+ + +S G
Sbjct: 62 YPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGG 121
Query: 152 KIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNSLISL 207
K+H +++K G D DA++E + C G ++ F + R W++L+S
Sbjct: 122 KVHGRIIKGGVDD-----DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSS 176
Query: 208 AVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKD 267
++NG+ K+ +FK M +G E D+ T+I+++ EL L + R VH F D
Sbjct: 177 CLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLD 236
Query: 268 LSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVR 327
++ +LL+MYSK L ++ +F+K++ K+ V W MIS+Y + F +++L M++
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK 296
Query: 328 SGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQV-SVHNSLIDMYCECEDLN 386
SG +L T + +SS + I GK +H +R D S+ +L+++Y EC L+
Sbjct: 297 SGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLS 356
Query: 387 CARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACV 446
+ V + +V+W+S+I Y ++AL LF +M + ++ D T+ + + AC
Sbjct: 357 DCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACE 416
Query: 447 NIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITW 506
N G + K +HG+ ++ ++ V ++ Y+K G ++ A +F++ I + ++TW
Sbjct: 417 NAGLVPLGKQIHGHVIRTDVSD-EFVQNSLIDMYSKSGSVDSASTVFNQ--IKHRSVVTW 473
Query: 507 NSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEG-----RIIF 561
NSM+ ++++G+ + L+ M S + + +TFL ++ AC + G +E+G ++I
Sbjct: 474 NSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLII 533
Query: 562 KEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSE 621
+K+ + +++++ + G ++ A + + M + +++A MH
Sbjct: 534 SGLKDLF-------TDTALIDMYAKCGDLNAAETVFRAMSSRSIVSW-SSMINAYGMHGR 585
Query: 622 TELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFL 666
A T +++ E N V+ N+ +A G V + + +
Sbjct: 586 IGSAISTFNQMV--ESGTKPNEVVFMNVLSACGHSGSVEEGKYYF 628
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 197/608 (32%), Positives = 337/608 (55%), Gaps = 16/608 (2%)
Query: 104 KNLSKF---GEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKL 160
K LS++ G+Y L + M + + T+ ++ + + G+++H +KL
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 161 GFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNSLISLAVQNGKSEK 216
G D V ++L+ Y K + G + F ++ R WNS+I+ QNG +
Sbjct: 345 GLDLMLTVSNSLINMYCKL-----RKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVE 399
Query: 217 SFELFKLMRMEGAEFDSGTLINLLRSTVEL-KSLELGRIVHCVAVVSDFCKDLSVNTALL 275
+ LF + G + D T+ ++L++ L + L L + VH A+ + D V+TAL+
Sbjct: 400 AVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALI 459
Query: 276 SMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLF 335
YS+ +++A++LF++ + D V WN M++ Y QS ++L+L M + G R+D F
Sbjct: 460 DAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDF 518
Query: 336 TAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSV 395
T + + I GKQ+HA +++G D + V + ++DMY +C D++ A+ FDS+
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 396 KTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVK 455
V+W++MI G + + + A +FS+M+L GV D TI + A + ALE +
Sbjct: 579 PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638
Query: 456 YLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAK 515
+H ++KL + V T++ YAKCG I+ A LF ++I+ +I WN+M+ A+
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF--KRIEMMNITAWNAMLVGLAQ 696
Query: 516 HGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQE 575
HG+ + +L+ QMK ++PD +TF+G+L+AC ++GLV E + M YG +P E
Sbjct: 697 HGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIE 756
Query: 576 HYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISM 635
HY+ + + LGRAG + +A L++ M + A ++ LL+AC++ +TE + A KL+ +
Sbjct: 757 HYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLEL 816
Query: 636 EPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQS 695
EP ++ YVLLSN+YAAA KW+ + RT ++ +KK PG SWIE+ +H F D+S
Sbjct: 817 EPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRS 876
Query: 696 HPQADAIY 703
+ Q + IY
Sbjct: 877 NRQTELIY 884
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 158/699 (22%), Positives = 304/699 (43%), Gaps = 86/699 (12%)
Query: 52 HARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGE 111
HAR + + +++ NLI Y+ G L+ +++VF+ + + + + +IL ++ E
Sbjct: 62 HARILTFEENPERFLIN-NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSE 120
Query: 112 -----YEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFD 166
++ L+++ + +Y + T +++ C + E H K+G D +
Sbjct: 121 CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180
Query: 167 DVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFK---- 222
V ALV Y+K E + + ++D+ WN ++ ++ G E++ +L
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDV-VLWNLMLKAYLEMGFKEEAIDLSSAFHS 239
Query: 223 ------------LMRMEGAEFDSGTL---------------------------------- 236
L R+ G + D+G +
Sbjct: 240 SGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSAL 299
Query: 237 ----INLLRSTVE---------------LKSLELGRIVHCVAVVSDFCKDLSVNTALLSM 277
+++ S VE + SL LG+ VHC+A+ L+V+ +L++M
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 278 YSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTA 337
Y KL A+ +FD MS++D + WN +I+ Q+G E++ L M ++R G + D +T
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 338 IAAVSSISTM-KNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVK 396
+ + + S++ + + KQ+H + ++ + V +LID Y + A +F+
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-H 478
Query: 397 TKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKY 456
+V+W++M+ GY + L+LF+ M +G D T+ + C + A+ K
Sbjct: 479 NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ 538
Query: 457 LHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKH 516
+H Y++K G + V++ I Y KCG +M+ F + I D + W +MIS ++
Sbjct: 539 VHAYAIKSGYDLDLWVSSGILDMYVKCG--DMSAAQFAFDSIPVPDDVAWTTMISGCIEN 596
Query: 517 GDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKE-MKESYGYEPSQE 575
G+ + F +++QM+ V PD T L A +E+GR I +K + +P
Sbjct: 597 GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 656
Query: 576 HYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETE--LAELTAEKLI 633
S+V++ + G +D+A L K + + W +L H E + L K +
Sbjct: 657 --TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Query: 634 SMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLK 672
++P+ +LS + MR+ D G+K
Sbjct: 714 GIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 186/407 (45%), Gaps = 40/407 (9%)
Query: 146 DFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLI 205
D + G+ HA+++ + + + L+ Y KC + + +DL S WNS++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS-WNSIL 112
Query: 206 SLAVQNGKS-----EKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAV 260
+ Q+ + +++F LF+++R + TL +L+ + + H A
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 261 VSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLE 320
D V AL+++Y K +++ K+LF++M +D V+WN+M+ AY + GF +E+++
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 321 LLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYC 380
L SG + T + ++ IS G A +++ ++
Sbjct: 233 LSSAFHSSGLNPNEIT-LRLLARIS-------GDDSDAGQVKSFANGN------------ 272
Query: 381 ECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIIN 440
D+ ++ + + Y+ Q L+ F++M VE D VT I
Sbjct: 273 ------------DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFIL 320
Query: 441 ILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDS 500
+L V + +L + +H ++KLGL+ + +V+ ++ Y K A +FD +
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD--NMSE 378
Query: 501 KDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTA 547
+D+I+WNS+I+ A++G + L+ Q+ + ++PD T +L A
Sbjct: 379 RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 2/194 (1%)
Query: 49 QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSK 108
+Q+HA Y I G +L +SS ++D Y G +S +Q F+SI P+ + + T++ +
Sbjct: 537 KQVHA-YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595
Query: 109 FGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDV 168
GE E+ V+ QM L + P E T + ++ SCL G +IHA +KL + V
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFV 655
Query: 169 GDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEG 228
G +LV+ Y KC G ++ + +R + WN+++ Q+G+ +++ +LFK M+ G
Sbjct: 656 GTSLVDMYAKC-GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG 714
Query: 229 AEFDSGTLINLLRS 242
+ D T I +L +
Sbjct: 715 IKPDKVTFIGVLSA 728
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 49 QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSK 108
+QIHA + L+ + + ++L+D YA G + + +F I N + +L L++
Sbjct: 638 RQIHANALKLNCTNDPFV-GTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQ 696
Query: 109 FGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCS 142
GE ++TL ++KQM + P + T+ V+ +CS
Sbjct: 697 HGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 338 bits (868), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 213/693 (30%), Positives = 370/693 (53%), Gaps = 44/693 (6%)
Query: 35 SFSLLNLCENPQHLQ------QIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVF 88
+F + N+C+ L+ +H Y++ GL + ++S+L D Y G+L + +VF
Sbjct: 173 NFVVPNVCKACGALKWSRFGRGVHG-YVVKSGLEDCVFVASSLADMYGKCGVLDDASKVF 231
Query: 89 NSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFI 148
+ I N++ + ++ + G+ E+ + ++ M Q + P T + + + +
Sbjct: 232 DEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVE 291
Query: 149 SGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLA 208
G++ HA + G + + +G +L+ FY K G E + + R F+ WN +IS
Sbjct: 292 EGKQSHAIAIVNGMELDNILGTSLLNFYCKV-GLIEYAEMVFDRMFEKDVVTWNLIISGY 350
Query: 209 VQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDL 268
VQ G E + + +LMR+E ++D TL L+ + ++L+LG+ V C + F D+
Sbjct: 351 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI 410
Query: 269 SVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRS 328
+ + ++ MY+K S+ DAK +FD +KD ++WN +++AY +SG E+L L M
Sbjct: 411 VLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLE 470
Query: 329 GFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCA 388
G ++ T + S+ LRNG QV + DM+ + +
Sbjct: 471 GVPPNVITWNLIILSL----------------LRNG---QV---DEAKDMFLQMQS---- 504
Query: 389 RKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNI 448
S ++SW++M+ G V + S EA+ +M+ G+ + +I L AC ++
Sbjct: 505 -----SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 449 GALEHVKYLHGYSMK-LGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWN 507
+L + +HGY ++ L +SL S+ T++ YAKCG I A ++F K+ S+ ++ N
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS-KLYSELPLS-N 617
Query: 508 SMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKES 567
+MISAYA +G+ + LY ++ ++PD IT +L+AC +AG + + IF ++
Sbjct: 618 AMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSK 677
Query: 568 YGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAEL 627
+P EHY MV+LL AG ++A L+++MPFKPDAR+ L+++C +TEL +
Sbjct: 678 RSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDY 737
Query: 628 TAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIG--KL 685
+ KL+ EPEN+GNYV +SN YA G W+ V KMR ++ +GLKK PGCSWI+I +
Sbjct: 738 LSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEG 797
Query: 686 VHEFWAADQSHPQADAIYTILGILELEIMEGRR 718
VH F A D++H + + I +L +L ++ G +
Sbjct: 798 VHVFVANDKTHTRINEIQMMLALLLYDMGTGSK 830
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 149/530 (28%), Positives = 271/530 (51%), Gaps = 11/530 (2%)
Query: 93 SPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEK 152
SP+S Y + +L K GE ++ L + +M +++ + Y +++ C D +G++
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
Query: 153 IHAQVVKLG--FDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQ 210
IHA+++K G + + + LV FY KCD E + + +++ S W ++I + +
Sbjct: 92 IHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFS-WAAIIGVKCR 150
Query: 211 NGKSEKSFELFKLMRMEGAEF-DSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLS 269
G E + F M +E F D+ + N+ ++ LK GR VH V S +
Sbjct: 151 IGLCEGALMGFVEM-LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVF 209
Query: 270 VNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSG 329
V ++L MY K L+DA +FD++ D++ V WN ++ Y Q+G +E++ L M + G
Sbjct: 210 VASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269
Query: 330 FRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCAR 389
T +S+ + M +E GKQ HA + NG + + SL++ YC+ + A
Sbjct: 270 VEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAE 329
Query: 390 KIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIG 449
+FD + K VV+W+ +I GYV +A+ + M+LE ++ D VT+ ++ A
Sbjct: 330 MVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTE 389
Query: 450 ALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSM 509
L+ K + Y ++ S + + + YAKCG I A ++FD KD+I WN++
Sbjct: 390 NLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTV--EKDLILWNTL 447
Query: 510 ISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYG 569
++AYA+ G + +L+ M+ V P++IT+ ++ + + G V+E + +F +M+ S G
Sbjct: 448 LAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-G 506
Query: 570 YEPSQEHYASMVNLLGRAGHMDEARELVKDMP---FKPDARVWGPLLSAC 616
P+ + +M+N + + G +EA ++ M +P+A LSAC
Sbjct: 507 IIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 338 bits (867), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 202/679 (29%), Positives = 361/679 (53%), Gaps = 23/679 (3%)
Query: 49 QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSK 108
+ +H + II G + ++ L++ YA G L+ + +FN+I + + + +++ S+
Sbjct: 34 RAVHGQ-IIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 109 FGEYEKTLLV---YKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSF 165
G + V +++M Q + P T + ++ S L G + HA VVK+ SF
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM--SSF 150
Query: 166 DD--VGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNSLISLAVQNGKSEKSFE 219
D V +LV Y C G E G+ + F + R W++++S G+ E++ +
Sbjct: 151 GDIYVDTSLVGMY--CKAGLV-EDGL--KVFAYMPERNTYTWSTMVSGYATRGRVEEAIK 205
Query: 220 LFKLM---RMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLS 276
+F L + EG++ D +L S + LGR +HC+ + + ++++ AL++
Sbjct: 206 VFNLFLREKEEGSDSDY-VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264
Query: 277 MYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFT 336
MYSK SL +A +FD D++ + W+ M++ Y Q+G E+++L M +G + +T
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 337 AIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVK 396
+ +++ S + +E GKQ+H+ +L+ G + + +L+DMY + L ARK FD ++
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ 384
Query: 397 TKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKY 456
+ V W+S+I GYV + + EAL L+ MK G+ + T+ ++L AC ++ LE K
Sbjct: 385 ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ 444
Query: 457 LHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKH 516
+HG+++K G + +A+ Y+KCG +E +F + +KD+++WN+MIS + +
Sbjct: 445 VHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF--RRTPNKDVVSWNAMISGLSHN 502
Query: 517 GDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEH 576
G + +L+ +M + PD +TF+ +++AC + G VE G F M + G +P +H
Sbjct: 503 GQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDH 562
Query: 577 YASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISME 636
YA MV+LL RAG + EA+E ++ +W LLSACK H + EL EKL+++
Sbjct: 563 YACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALG 622
Query: 637 PENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSH 696
+ YV LS IY A G+ V ++ +R G+ K GCSWIE+ H F D H
Sbjct: 623 SRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMH 682
Query: 697 PQADAIYTILGILELEIME 715
P + ++ ++ +++E
Sbjct: 683 PMIEETKDLVCLVSRQMIE 701
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 270/519 (52%), Gaps = 26/519 (5%)
Query: 146 DFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKF-KDLKSRWNSL 204
+ ++G +H Q+++ G + + LV FY KC G + KD+ S WNSL
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKC-GKLAKAHSIFNAIICKDVVS-WNSL 86
Query: 205 ISLAVQNGKSEKSF---ELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVV 261
I+ QNG S+ +LF+ MR + ++ TL + ++ L+S +GR H + V
Sbjct: 87 ITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK 146
Query: 262 SDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLEL 321
D+ V+T+L+ MY K +ED +F M +++ W+ M+S Y G +E++++
Sbjct: 147 MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV 206
Query: 322 LMCMVR---SGFRAD-LFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLID 377
+R G +D +FTA+ +SS++ + G+Q+H ++NG V++ N+L+
Sbjct: 207 FNLFLREKEEGSDSDYVFTAV--LSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264
Query: 378 MYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVT 437
MY +CE LN A K+FDS + ++WS+M+ GY + +SLEA++LFS M G++ T
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 438 IINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEK 497
I+ +L AC +I LE K LH + +KLG TA+ YAK GC+ A + FD
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFD--C 382
Query: 498 IDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEG 557
+ +D+ W S+IS Y ++ D + LY +MK + + P+ T +L AC + +E G
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 558 RIIFKE-MKESYGYE-PSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSA 615
+ + +K +G E P ++M + + G +++ + + P K D W ++S
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYS---KCGSLEDGNLVFRRTPNK-DVVSWNAMISG 498
Query: 616 CKMHSETELA-ELTAEKLI-SMEPENAGNYVLLSNIYAA 652
+ + + A EL E L MEP++ V NI +A
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDD----VTFVNIISA 533
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 143/283 (50%), Gaps = 11/283 (3%)
Query: 38 LLNLCENPQHLQ---QIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSP 94
+LN C + +L+ Q+H+ +++ G ++L ++ L+D YA G L+ +++ F+ +
Sbjct: 328 VLNACSDICYLEEGKQLHS-FLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 95 NSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIH 154
+ L+ +++ + + E+ L++Y++M + P + T V+++CS L G+++H
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446
Query: 155 AQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKS 214
+K GF +G AL Y KC G E+ + +R WN++IS NG+
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKC-GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQG 505
Query: 215 EKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSD-FCKDLSVN-- 271
+++ ELF+ M EG E D T +N++ + +E G ++SD D V+
Sbjct: 506 DEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFY--FNMMSDQIGLDPKVDHY 563
Query: 272 TALLSMYSKLASLEDAKMLFDKMS-DKDRVVWNIMISAYYQSG 313
++ + S+ L++AK + + D +W I++SA G
Sbjct: 564 ACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 108/222 (48%), Gaps = 9/222 (4%)
Query: 345 STMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWS 404
S +N+ G+ +H ++R G+ + N L++ Y +C L A IF+++ K VVSW+
Sbjct: 25 SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWN 84
Query: 405 SMIKGYVTH---DQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYS 461
S+I GY + S ++LF EM+ + + + T+ I A ++ + + H
Sbjct: 85 SLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALV 144
Query: 462 MKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHG---D 518
+K+ V+T++ Y K G +E ++F + ++ TW++M+S YA G +
Sbjct: 145 VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVF--AYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 519 WSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRII 560
+ F L+ + K+ D + F +L++ V GR I
Sbjct: 203 AIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQI 243
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 212/682 (31%), Positives = 360/682 (52%), Gaps = 27/682 (3%)
Query: 46 QHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKN 105
Q L H Y I G ++ +S+ ++DSY G L + +F+ + +S+ + T++
Sbjct: 17 QKLSLTHC-YAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 106 LSKFGEYEKTLLVYKQMALQSMYPAEDTYPF--VIRSCSCLLDFISGEKIHAQVVKLGFD 163
+ G+ E ++ M D Y F +++ + + F GE++H V+K G++
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSG--SDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYE 133
Query: 164 SFDDVGDALVEFYIKCD---GGFENEKGMIQRKFKDLKS----RWNSLISLAVQNGKSEK 216
VG +LV+ Y KC+ FE FK++ WN+LI+ VQ +
Sbjct: 134 CNVYVGSSLVDMYAKCERVEDAFE--------AFKEISEPNSVSWNALIAGFVQVRDIKT 185
Query: 217 SFELFKLMRMEGA-EFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALL 275
+F L LM M+ A D+GT LL + L + VH + ++++ A++
Sbjct: 186 AFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMI 245
Query: 276 SMYSKLASLEDAKMLFDKMS-DKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADL 334
S Y+ S+ DAK +FD + KD + WN MI+ + + + + EL + M R D+
Sbjct: 246 SSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDI 305
Query: 335 FTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCE--CEDLNCARKIF 392
+T +S+ S ++ +GK +H V++ G + S N+LI MY + + A +F
Sbjct: 306 YTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLF 365
Query: 393 DSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALE 452
+S+K+K ++SW+S+I G+ S +A++ FS ++ ++VD +L +C ++ L+
Sbjct: 366 ESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQ 425
Query: 453 HVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSK-DIITWNSMIS 511
+ +H + K G S V +++ + Y+KCG IE A + F ++I SK + WN+MI
Sbjct: 426 LGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCF--QQISSKHSTVAWNAMIL 483
Query: 512 AYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYE 571
YA+HG L++QM +V+ D +TF +LTAC + GL++EG + M+ Y +
Sbjct: 484 GYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQ 543
Query: 572 PSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEK 631
P EHYA+ V+LLGRAG +++A+EL++ MP PD V L C+ E E+A A
Sbjct: 544 PRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANH 603
Query: 632 LISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWA 691
L+ +EPE+ YV LS++Y+ KW A ++ +++RG+KK PG SWIEI V F A
Sbjct: 604 LLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNA 663
Query: 692 ADQSHPQADAIYTILGILELEI 713
D+S+P IY ++ L E+
Sbjct: 664 EDRSNPLCQDIYMMIKDLTQEM 685
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 336 bits (861), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 185/508 (36%), Positives = 294/508 (57%), Gaps = 6/508 (1%)
Query: 201 WNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAV 260
+NSLI+ V N ++ +LF +R G T +L++ S +LG +H + V
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 261 VSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLE 320
F D++ T+LLS+YS L DA LFD++ D+ V W + S Y SG +E+++
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 321 LLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYC 380
L MV G + D + + +S+ + +++ G+ + + V +L+++Y
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 381 ECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIIN 440
+C + AR +FDS+ K +V+WS+MI+GY ++ E + LF +M E ++ D +I+
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 441 ILPACVNIGALEHVKYLHGYSMKLGLNSLSSV--NTAIFISYAKCGCIEMAGELFDEEKI 498
L +C ++GAL+ ++ G S+ L+++ A+ YAKCG + E+F E K
Sbjct: 319 FLSSCASLGALDLGEW--GISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK- 375
Query: 499 DSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGR 558
KDI+ N+ IS AK+G F ++ Q ++ + PD TFLGLL CV+AGL+++G
Sbjct: 376 -EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGL 434
Query: 559 IIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKM 618
F + Y + + EHY MV+L GRAG +D+A L+ DMP +P+A VWG LLS C++
Sbjct: 435 RFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRL 494
Query: 619 HSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCS 678
+T+LAE ++LI++EP NAGNYV LSNIY+ G+W+ A++R + +G+KK PG S
Sbjct: 495 VKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYS 554
Query: 679 WIEIGKLVHEFWAADQSHPQADAIYTIL 706
WIE+ VHEF A D+SHP +D IY L
Sbjct: 555 WIELEGKVHEFLADDKSHPLSDKIYAKL 582
Score = 166 bits (419), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 138/569 (24%), Positives = 259/569 (45%), Gaps = 50/569 (8%)
Query: 37 SLLNLCENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNS 96
+L+++ HL+QIH +I H LH + L + L+ S +F+ PN
Sbjct: 18 TLISVACTVNHLKQIHVS-LINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNI 76
Query: 97 LLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQ 156
LY +++ + +TL ++ + +Y T+P V+++C+ G +H+
Sbjct: 77 FLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSL 136
Query: 157 VVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNSLISLAVQNG 212
VVK GF+ DV I G N+ + F ++ R W +L S +G
Sbjct: 137 VVKCGFNH--DVAAMTSLLSIYSGSGRLNDA---HKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 213 KSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNT 272
+ ++ +LFK M G + DS ++ +L + V + L+ G + + K+ V T
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251
Query: 273 ALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRA 332
L+++Y+K +E A+ +FD M +KD V W+ MI Y + FPKE +EL + M++ +
Sbjct: 252 TLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKP 311
Query: 333 DLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIF 392
D F+ + +SS +++ ++ G+ + + R+ + + N+LIDMY +C + ++F
Sbjct: 312 DQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVF 371
Query: 393 DSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALE 452
+K K +V ++ I G + + +F + + G+ D T + +L CV+ G ++
Sbjct: 372 KEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQ 431
Query: 453 HVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISA 512
GL ++++ YA +E G M+
Sbjct: 432 D-----------GLRFFNAISCV----YALKRTVEHYG-----------------CMVDL 459
Query: 513 YAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEP 572
+ + G ++L M +RP+ I + LL+ C LV++ ++ +KE EP
Sbjct: 460 WGRAGMLDDAYRLICDMP---MRPNAIVWGALLSGC---RLVKDTQLAETVLKELIALEP 513
Query: 573 -SQEHYASMVNLLGRAGHMDEARELVKDM 600
+ +Y + N+ G DEA E V+DM
Sbjct: 514 WNAGNYVQLSNIYSVGGRWDEAAE-VRDM 541
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 168/315 (53%), Gaps = 3/315 (0%)
Query: 289 MLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMK 348
+LF + ++N +I+ + + E+L+L + + + G FT + + +
Sbjct: 66 LLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRAS 125
Query: 349 NIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIK 408
+ + G +H+ V++ G ++ V+ SL+ +Y LN A K+FD + ++VV+W+++
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS 185
Query: 409 GYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNS 468
GY T + EA+ LF +M GV+ D I+ +L ACV++G L+ +++ Y ++ +
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 469 LSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQ 528
S V T + YAKCG +E A +FD + KDI+TW++MI YA + + +L+ Q
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDS--MVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 529 MKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAG 588
M Q +++PD + +G L++C + G ++ G + + + + + +++++ + G
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 589 HMDEARELVKDMPFK 603
M E+ K+M K
Sbjct: 363 AMARGFEVFKEMKEK 377
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 336 bits (861), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 218/662 (32%), Positives = 359/662 (54%), Gaps = 23/662 (3%)
Query: 60 GLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNL--SKFGEYEKTLL 117
GL +L + S L+ ++A G LS +++VFN + + N++ ++ L K+GE E T L
Sbjct: 238 GLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGE-EATKL 296
Query: 118 VYKQMALQSMYPAEDTYPFVIRS-----CSCLLDFISGEKIHAQVVKLGF-DSFDDVGDA 171
++ + P ++Y ++ S + + G ++H V+ G D +G+
Sbjct: 297 FMDMNSMIDVSP--ESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 172 LVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEF 231
LV Y KC + + KD S WNS+I+ QNG ++ E +K MR
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVS-WNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 232 DSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLF 291
S TLI+ L S LK +LG+ +H ++ ++SV+ AL+++Y++ L + + +F
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 292 DKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMV---RSGFRADLFTAIAAVSSISTMK 348
M + D+V WN +I A +S + E ++C + R+G + + T + +S++S++
Sbjct: 474 SSMPEHDQVSWNSIIGALARS--ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 349 NIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSV-KTKTVVSWSSMI 407
E GKQ+H L+N + + N+LI Y +C +++ KIF + + + V+W+SMI
Sbjct: 532 FGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Query: 408 KGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLN 467
GY+ ++ +AL L M G +D +L A ++ LE +H S++ L
Sbjct: 592 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLE 651
Query: 468 SLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYT 527
S V +A+ Y+KCG ++ A F+ + ++ +WNSMIS YA+HG + KL+
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPV--RNSYSWNSMISGYARHGQGEEALKLFE 709
Query: 528 QMK-QSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGR 586
MK PD +TF+G+L+AC +AGL+EEG F+ M +SYG P EH++ M ++LGR
Sbjct: 710 TMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGR 769
Query: 587 AGHMDEARELVKDMPFKPDARVWGPLLSACKMHS--ETELAELTAEKLISMEPENAGNYV 644
AG +D+ + ++ MP KP+ +W +L AC + + EL + AE L +EPENA NYV
Sbjct: 770 AGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYV 829
Query: 645 LLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYT 704
LL N+YAA G+W + K R ++D +KK G SW+ + VH F A D+SHP AD IY
Sbjct: 830 LLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYK 889
Query: 705 IL 706
L
Sbjct: 890 KL 891
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 146/609 (23%), Positives = 293/609 (48%), Gaps = 28/609 (4%)
Query: 30 MTATHSFSLLNLCENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFN 89
MT S + C + + + + L +++ L +NLI++Y G +++VF+
Sbjct: 1 MTNCVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFD 60
Query: 90 SITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCL--LDF 147
+ N + + I+ S+ GE+++ L+ + M + ++ + + V+R+C + +
Sbjct: 61 EMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGI 120
Query: 148 ISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNS 203
+ G +IH + KL + V + L+ Y KC G G F D++ + WNS
Sbjct: 121 LFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSV----GYALCAFGDIEVKNSVSWNS 176
Query: 204 LISLAVQNGKSEKSFELFKLMRMEGA---EFDSGTLINLLRSTVELKSLELGRIVHCVAV 260
+IS+ Q G +F +F M+ +G+ E+ G+L+ S E + L + C
Sbjct: 177 IISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTE-PDVRLLEQIMCTIQ 235
Query: 261 VSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLE 320
S DL V + L+S ++K SL A+ +F++M ++ V N ++ + + +E+ +
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 321 LLMCM-----VRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNG-SDYQVSVHNS 374
L M M V L ++ S++ ++ G+++H +V+ G D+ V + N
Sbjct: 296 LFMDMNSMIDVSPESYVILLSSFPEY-SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 375 LIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVD 434
L++MY +C + AR++F + K VSW+SMI G + +EA+ + M+ +
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 435 FVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFD 494
T+I+ L +C ++ + + +HG S+KLG++ SV+ A+ YA+ G + ++F
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF- 473
Query: 495 EEKIDSKDIITWNSMISAYAK-HGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGL 553
+ D ++WNS+I A A+ + + +++ + + ITF +L+A +
Sbjct: 474 -SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 554 VEEGRIIFK-EMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPL 612
E G+ I +K + E + E+ +++ G+ G MD ++ M + D W +
Sbjct: 533 GELGKQIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 613 LSACKMHSE 621
+S +H+E
Sbjct: 591 ISG-YIHNE 598
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 259/538 (48%), Gaps = 60/538 (11%)
Query: 49 QQIHARYIILHGLHQNLI-LSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLS 107
+++H ++I GL ++ + + L++ YA G ++ +++VF +T +S+ + +++ L
Sbjct: 333 REVHG-HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 108 KFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDD 167
+ G + + + YK M + P T + SC+ L G++IH + +KLG D
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451
Query: 168 VGDALVEFYIKCDGGFENE-KGMIQRKFKDLKSRWNSLISLAVQNGKS-EKSFELFKLMR 225
V +AL+ Y + G+ NE + + + + WNS+I ++ +S ++ F +
Sbjct: 452 VSNALMTLY--AETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ 509
Query: 226 MEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLE 285
G + + T ++L + L ELG+ +H +A+ ++ + + AL++ Y K ++
Sbjct: 510 RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMD 569
Query: 286 DAKMLFDKMSDK-DRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSI 344
+ +F +M+++ D V WN MIS Y + ++L+L+ M+++G R D F +S+
Sbjct: 570 GCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAF 629
Query: 345 STMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWS 404
+++ +E G ++HA +R + V V ++L+DMY +C L+ A + F+++ + SW+
Sbjct: 630 ASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWN 689
Query: 405 SMIKGYVTHDQSLEALRLFSEMKLEG-VEVDFVTIINILPACVNIGALEH-VKYLHGYSM 462
SMI GY H Q EAL+LF MKL+G D VT + +L AC + G LE K+ S
Sbjct: 690 SMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSD 749
Query: 463 KLGLNSLSSVNTAIFISYAKC--GCIEMAGEL-----FDEEKIDSKDIITWNSMISA--- 512
GL A I + C + AGEL F E+ +++ W +++ A
Sbjct: 750 SYGL--------APRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCR 801
Query: 513 ---------------------------------YAKHGDWSQCFKLYTQMKQSDVRPD 537
YA G W K +MK +DV+ +
Sbjct: 802 ANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKE 859
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 160/611 (26%), Positives = 281/611 (45%), Gaps = 35/611 (5%)
Query: 37 SLLNLCENPQHLQQIHARYIILHGLHQNL------ILSSNLIDSYAN-LGLLSLSQQVFN 89
S+L C+ + + R I HGL L ++S+ LI Y +G + + F
Sbjct: 107 SVLRACQEIGSVGILFGRQI--HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFG 164
Query: 90 SITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLL--DF 147
I NS+ + +I+ S+ G+ ++ M P E T+ ++ + L D
Sbjct: 165 DIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDV 224
Query: 148 ISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNS 203
E+I + K G + VG LV + K ++ F +++R N
Sbjct: 225 RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAK-----SGSLSYARKVFNQMETRNAVTLNG 279
Query: 204 LISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELK-----SLELGRIVHCV 258
L+ V+ E++ +LF M + + + LL S E L+ GR VH
Sbjct: 280 LMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGH 338
Query: 259 AVVS---DFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFP 315
+ + DF + + L++MY+K S+ DA+ +F M+DKD V WN MI+ Q+G
Sbjct: 339 VITTGLVDFM--VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 396
Query: 316 KESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSL 375
E++E M R FT I+++SS +++K + G+Q+H L+ G D VSV N+L
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456
Query: 376 IDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSL-EALRLFSEMKLEGVEVD 434
+ +Y E LN RKIF S+ VSW+S+I ++SL EA+ F + G +++
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLN 516
Query: 435 FVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFD 494
+T ++L A ++ E K +HG ++K + ++ A+ Y KCG ++ ++F
Sbjct: 517 RITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIF- 575
Query: 495 EEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLV 554
+ +D +TWNSMIS Y + ++ L M Q+ R D + +L+A + +
Sbjct: 576 SRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATL 635
Query: 555 EEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLS 614
E G + + E +++V++ + G +D A MP + ++ W ++S
Sbjct: 636 ERGMEVHACSVRAC-LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMIS 693
Query: 615 ACKMHSETELA 625
H + E A
Sbjct: 694 GYARHGQGEEA 704
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 146/299 (48%), Gaps = 17/299 (5%)
Query: 357 HANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQS 416
H+ + +N D V + N+LI+ Y E D ARK+FD + + VSW+ ++ GY + +
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 417 LEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHV--KYLHGYSMKLGLNSLSSVNT 474
EAL +M EG+ + +++L AC IG++ + + +HG KL + V+
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 475 AIFISYAKC-GCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSD 533
+ Y KC G + A F + I+ K+ ++WNS+IS Y++ GD F++++ M+
Sbjct: 144 VLISMYWKCIGSVGYALCAFGD--IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 534 VRPDLITFLGLL-TACVNAGLVEEGRIIFKEMK---ESYGYEPSQEHYASMVNLLGRAGH 589
RP TF L+ TAC L E + +++ + G + +V+ ++G
Sbjct: 202 SRPTEYTFGSLVTTAC---SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 590 MDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAE--KLISMEPENAGNYVLL 646
+ AR++ M + + G ++ + E +L + +I + PE +YV+L
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE---SYVIL 314
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 335 bits (860), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 203/648 (31%), Positives = 329/648 (50%), Gaps = 50/648 (7%)
Query: 103 LKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLD-------FISGEKIHA 155
L +L+ G + + LQS D V+ S + LL F++G ++HA
Sbjct: 10 LGHLASHGHLHDAFKTFSLLRLQSSSAVSDD--LVLHSAASLLSACVDVRAFLAGVQVHA 67
Query: 156 QVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKS-RWNSLISLAVQNGKS 214
+ G + + LV FY + NE I L WN LI+ +N
Sbjct: 68 HCISSGVEYHSVLVPKLVTFYSAFN--LHNEAQSIIENSDILHPLPWNVLIASYAKNELF 125
Query: 215 EKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTAL 274
E+ +K M +G D+ T ++L++ E + GR+VH VS + L V AL
Sbjct: 126 EEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNAL 185
Query: 275 LSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADL 334
+SMY + ++ A+ LFD+M ++D V WN +I+ Y G E+ EL M SG +
Sbjct: 186 ISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSV 245
Query: 335 FT-------------AIAAVSSISTMKN----------------------IEWGKQMHAN 359
T + A+ IS M+N I GK++H
Sbjct: 246 ITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGL 305
Query: 360 VLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEA 419
+ + D +V N+LI MY +C+DL A +F + ++ +W+S+I GY ++S EA
Sbjct: 306 AIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEA 365
Query: 420 LRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLG-LNSLSSVNTAIFI 478
L EM + G + + +T+ +ILP C I L+H K H Y ++ + + ++
Sbjct: 366 SHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVD 425
Query: 479 SYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDL 538
YAK G I A ++ D + +D +T+ S+I Y G+ L+ +M +S ++PD
Sbjct: 426 VYAKSGKIVAAKQVSD--LMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483
Query: 539 ITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVK 598
+T + +L+AC ++ LV EG +F +M+ YG P +H++ MV+L GRAG + +A++++
Sbjct: 484 VTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIH 543
Query: 599 DMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNG 658
+MP+KP W LL+AC +H T++ + AEKL+ M+PEN G YVL++N+YAAAG W+
Sbjct: 544 NMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSK 603
Query: 659 VAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTIL 706
+A++RT +RD G+KK PGC+WI+ F D S P+A Y +L
Sbjct: 604 LAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLL 651
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 144/617 (23%), Positives = 269/617 (43%), Gaps = 93/617 (15%)
Query: 37 SLLNLCENPQHL---QQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITS 93
SLL+ C + + Q+HA + I G+ + +L L+ Y+ L + +Q + +
Sbjct: 48 SLLSACVDVRAFLAGVQVHA-HCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 94 PNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKI 153
+ L + ++ + +K +E+ + YK+M + + P TYP V+++C LD G +
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 154 HAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR----WNSLISLAV 209
H + + S V +AL+ Y + F N G+ +R F + R WN++I+
Sbjct: 167 HGSIEVSSYKSSLYVCNALISMYKR----FRN-MGIARRLFDRMFERDAVSWNAVINCYA 221
Query: 210 QNGKSEKSFELFKLMRMEGAE-----------------------------------FDSG 234
G ++FELF M G E D
Sbjct: 222 SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPV 281
Query: 235 TLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKM 294
+I L++ + ++ LG+ +H +A+ S + +V L++MYSK L A ++F +
Sbjct: 282 AMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQT 341
Query: 295 SDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGK 354
+ WN +IS Y Q +E+ LL M+ +GF+ + T + + + + N++ GK
Sbjct: 342 EENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGK 401
Query: 355 QMHANVLRNG--SDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVT 412
+ H +LR DY + + NSL+D+Y + + A+++ D + + V+++S+I GY
Sbjct: 402 EFHCYILRRKCFKDYTM-LWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGN 460
Query: 413 HDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLH-GYSMKLGLNSLSS 471
+ AL LF EM G++ D VT++ +L AC H K +H G + + +
Sbjct: 461 QGEGGVALALFKEMTRSGIKPDHVTVVAVLSAC------SHSKLVHEGERLFMKMQC--- 511
Query: 472 VNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQ 531
Y C++ ++ M+ Y + G ++ + M
Sbjct: 512 -------EYGIRPCLQ-----------------HFSCMVDLYGRAGFLAKAKDIIHNMP- 546
Query: 532 SDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAG--- 588
+P T+ LL AC G + G+ +++ E P +Y + N+ AG
Sbjct: 547 --YKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPG--YYVLIANMYAAAGSWS 602
Query: 589 HMDEARELVKDMPFKPD 605
+ E R +++D+ K D
Sbjct: 603 KLAEVRTIMRDLGVKKD 619
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 335 bits (859), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 304/563 (53%), Gaps = 41/563 (7%)
Query: 190 IQRKFKDLKSR----WNSLI---SLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRS 242
++ F+ L R WN LI SL+ G + K++ +MR A TL+ +L+
Sbjct: 91 MESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYN--TMMRDFSANLTRVTLMTMLKL 148
Query: 243 TVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSD------ 296
+ + LG+ +H + F L V + LL MY+ + + DAK +F + D
Sbjct: 149 SSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMY 208
Query: 297 ------------------------KDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRA 332
KD V W MI Q+G KE++E M G +
Sbjct: 209 NSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKM 268
Query: 333 DLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIF 392
D + + + + + I GKQ+HA ++R + V ++LIDMYC+C+ L+ A+ +F
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 393 DSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALE 452
D +K K VVSW++M+ GY ++ EA+++F +M+ G++ D T+ + AC N+ +LE
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE 388
Query: 453 HVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISA 512
HG ++ GL +V+ ++ Y KCG I+ + LF+E ++ +D ++W +M+SA
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE--MNVRDAVSWTAMVSA 446
Query: 513 YAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEP 572
YA+ G + +L+ +M Q ++PD +T G+++AC AGLVE+G+ FK M YG P
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVP 506
Query: 573 SQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKL 632
S HY+ M++L R+G ++EA + MPF PDA W LLSAC+ E+ + AE L
Sbjct: 507 SIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESL 566
Query: 633 ISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAA 692
I ++P + Y LLS+IYA+ GKW+ VA++R +R++ +KK PG SWI+ +H F A
Sbjct: 567 IELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSAD 626
Query: 693 DQSHPQADAIYTILGILELEIME 715
D+S P D IY L L +I++
Sbjct: 627 DESSPYLDQIYAKLEELNNKIID 649
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 147/625 (23%), Positives = 278/625 (44%), Gaps = 81/625 (12%)
Query: 12 QSGHVKFLR------FPANQTRPHMTATHSFSLLNLCENPQHLQQIHARYIILHGLHQNL 65
QS +VK + P +T + H+++L+ +AR + NL
Sbjct: 21 QSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMK--------SSTYARRVFDRIPQPNL 72
Query: 66 ILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQ 125
+NL+ +Y+ GL+S + F + + + + +++ S G + Y M
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 126 -SMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFY--IKCDG- 181
S T +++ S G++IH QV+KLGF+S+ VG L+ Y + C
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 182 ------GFENEK--------------GMIQ------RKFKDLKSRWNSLISLAVQNGKSE 215
G ++ GMI+ R + W ++I QNG ++
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAK 252
Query: 216 KSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALL 275
++ E F+ M+++G + D ++L + L ++ G+ +H + ++F + V +AL+
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 276 SMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLF 335
MY K L AK +FD+M K+ V W M+ Y Q+G +E++++ + M RSG D +
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 336 TAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSV 395
T A+S+ + + ++E G Q H + +G + V+V NSL+ +Y +C D++ + ++F+ +
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 396 KTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVK 455
+ VSW++M+ Y +++E ++LF +M G++ D VT+ ++ AC G +E +
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 456 YLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAK 515
Y K L E I ++ MI +++
Sbjct: 493 -----------------------RYFK---------LMTSEYGIVPSIGHYSCMIDLFSR 520
Query: 516 HGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQE 575
G + + M PD I + LL+AC N G +E G+ + + E + P+
Sbjct: 521 SGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG- 576
Query: 576 HYASMVNLLGRAGHMDEARELVKDM 600
Y + ++ G D +L + M
Sbjct: 577 -YTLLSSIYASKGKWDSVAQLRRGM 600
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 12/175 (6%)
Query: 445 CVNIGAL---EHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSK 501
C+ +GA +VK +HG ++ + + I +YA A +FD +I
Sbjct: 13 CIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD--RIPQP 70
Query: 502 DIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIF 561
++ +WN+++ AY+K G S+ + ++ D +T+ L+ +GLV +
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDG----VTWNVLIEGYSLSGLVGAAVKAY 126
Query: 562 KEMKESYGYEPSQEHYASMVNLLGRAGHMDEAREL---VKDMPFKPDARVWGPLL 613
M + ++ +M+ L GH+ +++ V + F+ V PLL
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL 181
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 335 bits (859), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 278/456 (60%), Gaps = 8/456 (1%)
Query: 266 KDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCM 325
+D + T L+ MYS L S++ A+ +FDK + VWN + A +G +E L L M
Sbjct: 110 QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM 169
Query: 326 VRSGFRADLFTAI----AAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCE 381
R G +D FT A V+S T+ ++ GK++HA++ R G V + +L+DMY
Sbjct: 170 NRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYAR 229
Query: 382 CEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVE--VDFVTII 439
++ A +F + + VVSWS+MI Y + ++ EALR F EM E + + VT++
Sbjct: 230 FGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMV 289
Query: 440 NILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKID 499
++L AC ++ ALE K +HGY ++ GL+S+ V +A+ Y +CG +E+ +FD ++
Sbjct: 290 SVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD--RMH 347
Query: 500 SKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRI 559
+D+++WNS+IS+Y HG + +++ +M + P +TF+ +L AC + GLVEEG+
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Query: 560 IFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMH 619
+F+ M +G +P EHYA MV+LLGRA +DEA ++V+DM +P +VWG LL +C++H
Sbjct: 408 LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIH 467
Query: 620 SETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSW 679
ELAE + +L ++EP+NAGNYVLL++IYA A W+ V +++ L RGL+K PG W
Sbjct: 468 GNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCW 527
Query: 680 IEIGKLVHEFWAADQSHPQADAIYTILGILELEIME 715
+E+ + ++ F + D+ +P + I+ L L ++ E
Sbjct: 528 MEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKE 563
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 192/375 (51%), Gaps = 16/375 (4%)
Query: 50 QIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKF 109
++H R+I+ +G Q+ L++ LI Y++LG + +++VF+ ++ + + L+
Sbjct: 98 RVH-RHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLA 156
Query: 110 GEYEKTLLVYKQMALQSMYPAEDTYPFVIRSC---SCLLD-FISGEKIHAQVVKLGFDSF 165
G E+ L +Y +M + TY +V+++C C ++ + G++IHA + + G+ S
Sbjct: 157 GHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH 216
Query: 166 DDVGDALVEFYIK---CDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFK 222
+ LV+ Y + D GM R W+++I+ +NGK+ ++ F+
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS----WSAMIACYAKNGKAFEALRTFR 272
Query: 223 LMRMEGAEF--DSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSK 280
M E + +S T++++L++ L +LE G+++H + L V +AL++MY +
Sbjct: 273 EMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGR 332
Query: 281 LASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAA 340
LE + +FD+M D+D V WN +IS+Y G+ K+++++ M+ +G T ++
Sbjct: 333 CGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSV 392
Query: 341 VSSISTMKNIEWGKQMHANVLRN-GSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKT 399
+ + S +E GK++ + R+ G Q+ + ++D+ L+ A K+ ++T+
Sbjct: 393 LGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEP 452
Query: 400 VVS-WSSMIKGYVTH 413
W S++ H
Sbjct: 453 GPKVWGSLLGSCRIH 467
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 11/362 (3%)
Query: 102 ILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLG 161
++++L K G+ ++ + V Q + P++ TY +I C ++H ++ G
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107
Query: 162 FDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELF 221
D + L+ Y G + + + + K WN+L G E+ L+
Sbjct: 108 SDQDPFLATKLIGMYSDL-GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 222 KLMRMEGAEFDSGTLINLLRSTV----ELKSLELGRIVHCVAVVSDFCKDLSVNTALLSM 277
M G E D T +L++ V + L G+ +H + + + T L+ M
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 278 YSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVR--SGFRADLF 335
Y++ ++ A +F M ++ V W+ MI+ Y ++G E+L M+R +
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 336 TAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSV 395
T ++ + + +++ +E GK +H +LR G D + V ++L+ MY C L +++FD +
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM 346
Query: 396 KTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVK 455
+ VVSW+S+I Y H +A+++F EM G VT +++L AC + G +E K
Sbjct: 347 HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGK 406
Query: 456 YL 457
L
Sbjct: 407 RL 408
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 144/286 (50%), Gaps = 10/286 (3%)
Query: 355 QMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHD 414
++H ++L NGSD + LI MY + ++ ARK+FD + +T+ W+++ +
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 415 QSLEALRLFSEMKLEGVEVDFVTIINILPACV----NIGALEHVKYLHGYSMKLGLNSLS 470
E L L+ +M GVE D T +L ACV + L K +H + + G +S
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 471 SVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQM- 529
+ T + YA+ GC++ A +F + +++++W++MI+ YAK+G + + + +M
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPV--RNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 530 -KQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAG 588
+ D P+ +T + +L AC + +E+G++I + G + +++V + GR G
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR-GLDSILPVISALVTMYGRCG 334
Query: 589 HMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLIS 634
+ E + V D D W L+S+ +H + A E++++
Sbjct: 335 KL-EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 333 bits (854), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 195/665 (29%), Positives = 362/665 (54%), Gaps = 10/665 (1%)
Query: 56 IILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKT 115
++ GL +++ + + L+ Y G ++ + Q+F+ + N + + ++++ S G E++
Sbjct: 213 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 272
Query: 116 LLVYKQMALQ----SMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDA 171
L+ +M + + P T V+ C+ + G+ +H VKL D + +A
Sbjct: 273 FLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNA 332
Query: 172 LVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEF 231
L++ Y KC G N + + + WN+++ G + +F++ + M G +
Sbjct: 333 LMDMYSKC-GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV 391
Query: 232 --DSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKM 289
D T++N + L + +HC ++ +F + V A ++ Y+K SL A+
Sbjct: 392 KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR 451
Query: 290 LFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKN 349
+F + K WN +I + QS P+ SL+ + M SG D FT + +S+ S +K+
Sbjct: 452 VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 511
Query: 350 IEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKG 409
+ GK++H ++RN + + V+ S++ +Y C +L + +FD+++ K++VSW+++I G
Sbjct: 512 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITG 571
Query: 410 YVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSL 469
Y+ + AL +F +M L G+++ ++++ + AC + +L + H Y++K L
Sbjct: 572 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDD 631
Query: 470 SSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQM 529
+ + ++ YAK G I + ++F+ K K +WN+MI Y HG + KL+ +M
Sbjct: 632 AFIACSLIDMYAKNGSITQSSKVFNGLK--EKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689
Query: 530 KQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGH 589
+++ PD +TFLG+LTAC ++GL+ EG +MK S+G +P+ +HYA ++++LGRAG
Sbjct: 690 QRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQ 749
Query: 590 MDEA-RELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSN 648
+D+A R + ++M + D +W LLS+C++H E+ E A KL +EPE NYVLLSN
Sbjct: 750 LDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSN 809
Query: 649 IYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGI 708
+YA GKW V K+R + + L+K GCSWIE+ + V F ++ + I ++ I
Sbjct: 810 LYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSI 869
Query: 709 LELEI 713
LE++I
Sbjct: 870 LEMKI 874
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 198/415 (47%), Gaps = 19/415 (4%)
Query: 146 DFISGEKIHAQVVKLGFDSFDDV-GDALVEFYIKCDGGFENEKGMIQRKFKDLKSR---- 200
D G KIH V DDV ++ Y C G ++ + F L+S+
Sbjct: 99 DIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMC--GSPDDSRFV---FDALRSKNLFQ 153
Query: 201 WNSLISLAVQNGKSEKSFELF-KLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVA 259
WN++IS +N ++ E F +++ D T ++++ + + +G VH +
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 213
Query: 260 VVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESL 319
V + +D+ V AL+S Y + DA LFD M +++ V WN MI + +GF +ES
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 320 ELLMCMVR----SGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSL 375
LL M+ F D+ T + + + + I GK +H ++ D ++ ++N+L
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 376 IDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEG--VEV 433
+DMY +C + A+ IF K VVSW++M+ G+ + + +M G V+
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 393
Query: 434 DFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELF 493
D VTI+N +P C + L +K LH YS+K V A SYAKCG + A +F
Sbjct: 394 DEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 453
Query: 494 DEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTAC 548
I SK + +WN++I +A+ D + QMK S + PD T LL+AC
Sbjct: 454 --HGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
Query: 37 SLLNLCENPQHLQ---QIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITS 93
SLL+ C + L+ ++H +II + L ++L + +++ Y + G L Q +F+++
Sbjct: 501 SLLSACSKLKSLRLGKEVHG-FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 94 PNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKI 153
+ + + T++ + G ++ L V++QM L + + V +CS L G +
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA 619
Query: 154 HAQVVK--LGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQN 211
HA +K L D+F + +L++ Y K ++ K K K S WN++I +
Sbjct: 620 HAYALKHLLEDDAF--IACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIH 676
Query: 212 GKSEKSFELFKLMRMEGAEFDSGTLINLL 240
G ++++ +LF+ M+ G D T + +L
Sbjct: 677 GLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/484 (35%), Positives = 285/484 (58%), Gaps = 25/484 (5%)
Query: 224 MRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVN---------TAL 274
++ G DS T L++ + +++ G ++ C+ L N L
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLI---------CRHLYFNGHRPMMFLVNVL 102
Query: 275 LSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADL 334
++MY K L DA LFD+M ++ + W MISAY + +++LELL+ M+R R ++
Sbjct: 103 INMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNV 162
Query: 335 FTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDS 394
+T + + S + M ++ + +H +++ G + V V ++LID++ + + A +FD
Sbjct: 163 YTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 395 VKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHV 454
+ T + W+S+I G+ + +S AL LF MK G + T+ ++L AC + LE
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 455 KYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYA 514
H + +K + + +N A+ Y KCG +E A +F++ K +D+ITW++MIS A
Sbjct: 280 MQAHVHIVKYDQDLI--LNNALVDMYCKCGSLEDALRVFNQMK--ERDVITWSTMISGLA 335
Query: 515 KHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQ 574
++G + KL+ +MK S +P+ IT +G+L AC +AGL+E+G F+ MK+ YG +P +
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 575 EHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLIS 634
EHY M++LLG+AG +D+A +L+ +M +PDA W LL AC++ LAE A+K+I+
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Query: 635 MEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGKLVHEFWAADQ 694
++PE+AG Y LLSNIYA + KW+ V ++RT +RDRG+KK PGCSWIE+ K +H F D
Sbjct: 456 LDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDN 515
Query: 695 SHPQ 698
SHPQ
Sbjct: 516 SHPQ 519
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 191/392 (48%), Gaps = 33/392 (8%)
Query: 31 TATHSFSLLNLC--ENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVF 88
+AT+S L+ C H + R++ +G + L + LI+ Y LL+ + Q+F
Sbjct: 61 SATYS-ELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 89 NSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFI 148
+ + N + + T++ SK ++K L + M ++ P TY V+RSC+ + D
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV- 178
Query: 149 SGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLA 208
+H ++K G +S V AL++ + K G E+ + WNS+I
Sbjct: 179 --RMLHCGIIKEGLESDVFVRSALIDVFAKL-GEPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 209 VQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDL 268
QN +S+ + ELFK M+ G + TL ++LR+ L LELG H V D +DL
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDL 293
Query: 269 SVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRS 328
+N AL+ MY K SLEDA +F++M ++D + W+ MIS Q+G+ +E+L+L M S
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 329 GFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSV------------HNSLI 376
G + + T + + + S HA +L +G Y S+ + +I
Sbjct: 354 GTKPNYITIVGVLFACS-----------HAGLLEDGWYYFRSMKKLYGIDPVREHYGCMI 402
Query: 377 DMYCECEDLNCARKIFDSVKTKT-VVSWSSMI 407
D+ + L+ A K+ + ++ + V+W +++
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 144/297 (48%), Gaps = 28/297 (9%)
Query: 24 NQTRPHMTATHSFSLLNLCENPQHLQQIHARYIILHGLHQNLILSSNLIDSYANLGLLSL 83
+ RP++ T+S S+L C ++ +H II GL ++ + S LID +A LG
Sbjct: 156 DNVRPNVY-TYS-SVLRSCNGMSDVRMLHCG-IIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 84 SQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSC 143
+ VF+ + + +++++ +I+ ++ + L ++K+M + T V+R+C+
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 144 LLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR--- 200
L G + H +VK +D + +ALV+ Y KC G E+ R F +K R
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKC-GSLEDA----LRVFNQMKERDVI 325
Query: 201 -WNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELG------- 252
W+++IS QNG S+++ +LF+ M+ G + + T++ +L + LE G
Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 385
Query: 253 RIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMS-DKDRVVWNIMISA 308
+ ++ + V + ++ + K L+DA L ++M + D V W ++ A
Sbjct: 386 KKLYGIDPVREH------YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 33.5 bits (75), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 518 DWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHY 577
D + K ++ + D T+ L+ C++ V EG +I + + + G+ P
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFN-GHRPMMFLV 99
Query: 578 ASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSA---CKMHSET 622
++N+ + +++A +L MP + + W ++SA CK+H +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMP-QRNVISWTTMISAYSKCKIHQKA 146
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 218/705 (30%), Positives = 382/705 (54%), Gaps = 21/705 (2%)
Query: 18 FLRFPANQTRPHMTATHSF-SLLNLCENPQHLQ---QIHARYIILHGLHQNLILSSNLID 73
F AN+ P T +F SLL C + Q L IH + ++++G + +SS+L++
Sbjct: 34 FSSMLANKLLPD---TFTFPSLLKACASLQRLSFGLSIHQQ-VLVNGFSSDFYISSSLVN 89
Query: 74 SYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDT 133
YA GLL+ +++VF + + + + ++ S+ G + + +M Q + P T
Sbjct: 90 LYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT 149
Query: 134 YPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRK 193
++ S +L+ + +H V GFD V ++++ Y KCD + + Q +
Sbjct: 150 ---LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQME 206
Query: 194 FKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGR 253
+D+ S WN++IS G + +L MR +G D T L + + LE+GR
Sbjct: 207 QRDMVS-WNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGR 265
Query: 254 IVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSG 313
++HC V + F D+ + TAL++MY K E + + + + +KD V W +MIS + G
Sbjct: 266 MLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLG 325
Query: 314 FPKESLELLMCMVRSGFRADLFT-AIAAV-SSISTMKNIEWGKQMHANVLRNGSDYQVSV 371
+++L + M++SG +DL + AIA+V +S + + + + G +H VLR+G
Sbjct: 326 RAEKALIVFSEMLQSG--SDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPA 383
Query: 372 HNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGV 431
NSLI MY +C L+ + IF+ + + +VSW+++I GY + +AL LF EMK + V
Sbjct: 384 LNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTV 443
Query: 432 E-VDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAG 490
+ VD T++++L AC + GAL K +H ++ + S V+TA+ Y+KCG +E A
Sbjct: 444 QQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQ 503
Query: 491 ELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVN 550
FD I KD+++W +I+ Y HG ++Y++ S + P+ + FL +L++C +
Sbjct: 504 RCFDS--ISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSH 561
Query: 551 AGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWG 610
G+V++G IF M +G EP+ EH A +V+LL RA +++A + K+ +P V G
Sbjct: 562 NGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLG 621
Query: 611 PLLSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRG 670
+L AC+ + +TE+ ++ E +I ++P +AG+YV L + +AA +W+ V++ +R G
Sbjct: 622 IILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLG 681
Query: 671 LKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILELEIME 715
LKK PG S IE+ F+ SH +D ++L +L E+M+
Sbjct: 682 LKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREMMQ 724
Score = 240 bits (612), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 303/584 (51%), Gaps = 25/584 (4%)
Query: 99 YGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVV 158
+ + + +LS G++++ L + M + P T+P ++++C+ L G IH QV+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 159 KLGFDSFDDVGDALVEFYIKCDGGFENEKGMI---QRKFKDLKSR----WNSLISLAVQN 211
GF S + +LV Y K G++ ++ F++++ R W ++I +
Sbjct: 74 VNGFSSDFYISSSLVNLYAKF--------GLLAHARKVFEEMRERDVVHWTAMIGCYSRA 125
Query: 212 GKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVN 271
G ++ L MR +G + TL+ +L +E+ L+ +H AV+ F D++V
Sbjct: 126 GIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFDCDIAVM 182
Query: 272 TALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFR 331
++L++Y K + DAK LFD+M +D V WN MIS Y G E L+LL M G R
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 332 ADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKI 391
D T A++S TM ++E G+ +H +++ G D + + +LI MY +C + ++
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 392 FDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPACVNIGAL 451
+++ K VV W+ MI G + ++ +AL +FSEM G ++ I +++ +C +G+
Sbjct: 303 LETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 452 EHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMIS 511
+ +HGY ++ G + ++ YAKCG ++ + +F E+++ +D+++WN++IS
Sbjct: 363 DLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIF--ERMNERDLVSWNAIIS 420
Query: 512 AYAKHGDWSQCFKLYTQMKQSDVRP-DLITFLGLLTACVNAGLVEEGRIIFKEMKESYGY 570
YA++ D + L+ +MK V+ D T + LL AC +AG + G++I + S+
Sbjct: 421 GYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-I 479
Query: 571 EPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELA-ELTA 629
P ++V++ + G+++ A+ + +K D WG L++ H + ++A E+ +
Sbjct: 480 RPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYS 538
Query: 630 EKLIS-MEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLK 672
E L S MEP + +LS+ G+ + +RD G++
Sbjct: 539 EFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVE 582
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 332 bits (850), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 207/678 (30%), Positives = 365/678 (53%), Gaps = 24/678 (3%)
Query: 50 QIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKF 109
QIH + G + +S+ ++ Y G + +F ++ P+ + + TIL S F
Sbjct: 97 QIHG-FSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTIL---SGF 152
Query: 110 GEYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVG 169
+ + L +M + TY + C F+ G ++ + VVK G +S VG
Sbjct: 153 DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVG 212
Query: 170 DALVEFYIKCDGGFENEKGMI-QRKFKDLKSRWNSLISLAVQNGK-SEKSFELFKLMRME 227
++ + Y + G F + + + FKD+ S WNSL+S Q G ++ +F+ M E
Sbjct: 213 NSFITMYSR-SGSFRGARRVFDEMSFKDMIS-WNSLLSGLSQEGTFGFEAVVIFRDMMRE 270
Query: 228 GAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDA 287
G E D + +++ + L+L R +H + + + L V L+S YSK LE
Sbjct: 271 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 330
Query: 288 KMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTM 347
K +F +MS+++ V W MIS+ +++ + + M G + T + ++++
Sbjct: 331 KSVFHQMSERNVVSWTTMISSN-----KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCN 385
Query: 348 KNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMI 407
+ I+ G ++H ++ G + SV NS I +Y + E L A+K F+ + + ++SW++MI
Sbjct: 386 EQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI 445
Query: 408 KGYVTHDQSLEALRLFSEMKLEGV--EVDFVTIINILPACVNIGALEHVKYLHGYSMKLG 465
G+ + S EAL++F E + E F +++N + +I +++ + H + +KLG
Sbjct: 446 SGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLG 504
Query: 466 LNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKL 525
LNS V++A+ YAK G I+ + ++F+E + K+ W S+ISAY+ HGD+ L
Sbjct: 505 LNSCPVVSSALLDMYAKRGNIDESEKVFNE--MSQKNQFVWTSIISAYSSHGDFETVMNL 562
Query: 526 YTQMKQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLG 585
+ +M + +V PDL+TFL +LTAC G+V++G IF M E Y EPS EHY+ MV++LG
Sbjct: 563 FHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLG 622
Query: 586 RAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETELAELTAEKLISMEPENAGNYVL 645
RAG + EA EL+ ++P P + +L +C++H ++ AE + M+PE +G+YV
Sbjct: 623 RAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQ 682
Query: 646 LSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIGK-----LVHEFWAADQSHPQAD 700
+ NIYA +W+ A++R +R + + K G SWI++G + F + D+SHP++D
Sbjct: 683 MYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSD 742
Query: 701 AIYTILGILELEI-MEGR 717
IY ++ I+ LE+ +EG+
Sbjct: 743 EIYRMVEIIGLEMNLEGK 760
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 154/592 (26%), Positives = 272/592 (45%), Gaps = 54/592 (9%)
Query: 142 SCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRW 201
+C D G +IH GF SF V +A++ Y K G F+N + + W
Sbjct: 87 ACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKA-GRFDNALCIFENLVDPDVVSW 145
Query: 202 NSLISLAVQNGKSEKSFELFKLMRME--GAEFDSGTLINLLRSTVELKSLELGRIVHCVA 259
N+++S G + L ++RM+ G FD+ T L V + LG +
Sbjct: 146 NTILS-----GFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 260 VVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSG-FPKES 318
V + DL V + ++MYS+ S A+ +FD+MS KD + WN ++S Q G F E+
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 319 LELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDM 378
+ + M+R G D + + +++ +++ +Q+H ++ G + + V N L+
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 379 YCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGV---EVDF 435
Y +C L + +F + + VVSW++MI +A+ +F M+ +GV EV F
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTF 375
Query: 436 VTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDE 495
V +IN + I E +K +HG +K G S SV + YAK +E A + F
Sbjct: 376 VGLINAVKCNEQIK--EGLK-IHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAF-- 430
Query: 496 EKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAG--L 553
E I ++II+WN+MIS +A++G + K++ ++ P+ TF +L A A
Sbjct: 431 EDITFREIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDIS 489
Query: 554 VEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLL 613
V++G+ + + G ++++++ + G++DE+ ++ +M K + VW ++
Sbjct: 490 VKQGQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK-NQFVWTSII 547
Query: 614 SACKMHSETELAELTAEKLISMEPEN-AGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLK 672
SA H + E K+I EN A + V ++ A R + D+G
Sbjct: 548 SAYSSHGDFETVMNLFHKMI---KENVAPDLVTFLSVLTACN--------RKGMVDKGY- 595
Query: 673 KTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILELEIMEGRRESSEEL 724
EI ++ E + + SH + +LG GR + +EEL
Sbjct: 596 --------EIFNMMIEVYNLEPSHEHYSCMVDMLG------RAGRLKEAEEL 633
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 332 bits (850), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 195/570 (34%), Positives = 300/570 (52%), Gaps = 12/570 (2%)
Query: 150 GEKIHAQVVKLGFDSFDD--VGDALVEFYIKCDGGFENEKGMIQRKFKDLKS--RWNSLI 205
G +HA++VK DS + + L+ Y K D E + + ++ W SLI
Sbjct: 25 GRVVHARIVKT-LDSPPPPFLANYLINMYSKLD---HPESARLVLRLTPARNVVSWTSLI 80
Query: 206 SLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFC 265
S QNG + F MR EG + T ++ L+ G+ +H +AV
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140
Query: 266 KDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCM 325
D+ V + MY K +DA+ LFD++ +++ WN IS G P+E++E +
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 200
Query: 326 VRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDL 385
R + T A +++ S ++ G Q+H VLR+G D VSV N LID Y +C+ +
Sbjct: 201 RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Query: 386 NCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVEVDFVTIINILPAC 445
+ IF + TK VSW S++ YV + + +A L+ + + VE I ++L AC
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320
Query: 446 VNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIIT 505
+ LE + +H +++K + V +A+ Y KCGCIE + + FDE + K+++T
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE--MPEKNLVT 378
Query: 506 WNSMISAYAKHGDWSQCFKLYTQM--KQSDVRPDLITFLGLLTACVNAGLVEEGRIIFKE 563
NS+I YA G L+ +M + P+ +TF+ LL+AC AG VE G IF
Sbjct: 379 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS 438
Query: 564 MKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPLLSACKMHSETE 623
M+ +YG EP EHY+ +V++LGRAG ++ A E +K MP +P VWG L +AC+MH + +
Sbjct: 439 MRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 498
Query: 624 LAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLKKTPGCSWIEIG 683
L L AE L ++P+++GN+VLLSN +AAAG+W +R L+ G+KK G SWI +
Sbjct: 499 LGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVK 558
Query: 684 KLVHEFWAADQSHPQADAIYTILGILELEI 713
VH F A D+SH I T L L E+
Sbjct: 559 NQVHAFQAKDRSHILNKEIQTTLAKLRNEM 588
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 226/472 (47%), Gaps = 9/472 (1%)
Query: 51 IHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFG 110
+HAR + L++ LI+ Y+ L ++ V + N + + +++ L++ G
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNG 87
Query: 111 EYEKTLLVYKQMALQSMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLG--FDSFDDV 168
+ L+ + +M + + P + T+P ++ + L ++G++IHA VK G D F V
Sbjct: 88 HFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF--V 145
Query: 169 GDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEG 228
G + + Y K + K + ++L++ WN+ IS +V +G+ ++ E F R
Sbjct: 146 GCSAFDMYCKTRLRDDARKLFDEIPERNLET-WNAFISNSVTDGRPREAIEAFIEFRRID 204
Query: 229 AEFDSGTLINLLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAK 288
+S T L + + L LG +H + + S F D+SV L+ Y K + ++
Sbjct: 205 GHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSE 264
Query: 289 MLFDKMSDKDRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMK 348
++F +M K+ V W +++AY Q+ +++ L + + F + +S+ + M
Sbjct: 265 IIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMA 324
Query: 349 NIEWGKQMHANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIK 408
+E G+ +HA+ ++ + + V ++L+DMY +C + + + FD + K +V+ +S+I
Sbjct: 325 GLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIG 384
Query: 409 GYVTHDQSLEALRLFSEMKLEGV--EVDFVTIINILPACVNIGALEH-VKYLHGYSMKLG 465
GY Q AL LF EM G +++T +++L AC GA+E+ +K G
Sbjct: 385 GYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG 444
Query: 466 LNSLSSVNTAIFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHG 517
+ + + I + G +E A E + I I W ++ +A HG
Sbjct: 445 IEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPT-ISVWGALQNACRMHG 495
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 178/366 (48%), Gaps = 4/366 (1%)
Query: 239 LLRSTVELKSLELGRIVHCVAVVS-DFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDK 297
LL++ + S+ LGR+VH V + D + L++MYSKL E A+++ +
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 298 DRVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMH 357
+ V W +IS Q+G +L M R G + FT A ++++++ GKQ+H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 358 ANVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSL 417
A ++ G V V S DMYC+ + ARK+FD + + + +W++ I VT +
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 418 EALRLFSEMKLEGVEVDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIF 477
EA+ F E + + +T L AC + L LHG ++ G ++ SV +
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251
Query: 478 ISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPD 537
Y KC I + +F E + +K+ ++W S+++AY ++ + + LY + ++ V
Sbjct: 252 DFYGKCKQIRSSEIIFTE--MGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 309
Query: 538 LITFLGLLTACVNAGLVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELV 597
+L+AC +E GR I ++ E + +++V++ G+ G ++++ +
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 598 KDMPFK 603
+MP K
Sbjct: 369 DEMPEK 374
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 158/353 (44%), Gaps = 10/353 (2%)
Query: 12 QSGH-----VKFLRFPANQTRPH-MTATHSFSLLNLCENPQHLQQIHARYIILHGLHQNL 65
Q+GH V+F P+ T +F + P +QIHA + G ++
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHA-LAVKCGRILDV 143
Query: 66 ILSSNLIDSYANLGLLSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQ 125
+ + D Y L ++++F+ I N + + N G + + + +
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 126 SMYPAEDTYPFVIRSCSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFEN 185
+P T+ + +CS L G ++H V++ GFD+ V + L++FY KC +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 186 EKGMIQRKFKDLKSRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVE 245
E + K+ S W SL++ VQN + EK+ L+ R + E + ++L +
Sbjct: 264 EIIFTEMGTKNAVS-WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322
Query: 246 LKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIM 305
+ LELGR +H AV + + + V +AL+ MY K +ED++ FD+M +K+ V N +
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 382
Query: 306 ISAYYQSGFPKESLELL--MCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQM 356
I Y G +L L M G + T ++ +S+ S +E G ++
Sbjct: 383 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 17/294 (5%)
Query: 37 SLLNLCENPQHLQ---QIHARYIILHGLHQNLILSSNLIDSYANLGLLSLSQQVFNSITS 93
+ LN C + HL Q+H ++ G ++ + + LID Y + S+ +F + +
Sbjct: 214 AFLNACSDWLHLNLGMQLHG-LVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT 272
Query: 94 PNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRS----CSCLLDFIS 149
N++ + +++ + E EK ++Y L+S +T F+I S C+ +
Sbjct: 273 KNAVSWCSLVAAYVQNHEDEKASVLY----LRSRKDIVETSDFMISSVLSACAGMAGLEL 328
Query: 150 GEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSRWNSLISLAV 209
G IHA VK + VG ALV+ Y KC ++E+ + K+L +R NSLI
Sbjct: 329 GRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR-NSLIGGYA 387
Query: 210 QNGKSEKSFELFKLM--RMEGAEFDSGTLINLLRSTVELKSLELG-RIVHCVAVVSDFCK 266
G+ + + LF+ M R G + T ++LL + ++E G +I +
Sbjct: 388 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 447
Query: 267 DLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRV-VWNIMISAYYQSGFPKESL 319
+ ++ M + +E A KM + + VW + +A G P+ L
Sbjct: 448 GAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 193/638 (30%), Positives = 337/638 (52%), Gaps = 11/638 (1%)
Query: 81 LSLSQQVFNSITSPNSLLYGTILKNLSKFGEYEKTLLVYKQMALQSMYPAEDTYPFVIRS 140
L ++Q+F+ + N + + +++ ++ G YE+ + ++ + ++ + TY +
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGF 157
Query: 141 CSCLLDFISGEKIHAQVVKLGFDSFDDVGDALVEFYIKCDGGFENEKGMIQRKFKDLKSR 200
C D GE +H VV G + + L++ Y KC G + + R + +
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKC-GKLDQAMSLFDRCDERDQVS 216
Query: 201 WNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRST-VELKS--LELGRIVHC 257
WNSLIS V+ G +E+ L M +G + L ++L++ + L +E G +HC
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 258 VAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKDRVVWNIMISAYYQ-----S 312
D+ V TALL MY+K SL++A LF M K+ V +N MIS + Q
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336
Query: 313 GFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHANVLRNGSDYQVSVH 372
E+ +L M M R G T + + S K +E+G+Q+HA + +N +
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG 396
Query: 373 NSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLEALRLFSEMKLEGVE 432
++LI++Y + F S + + SW+SMI +V ++Q A LF ++ +
Sbjct: 397 SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 433 VDFVTIINILPACVNIGALEHVKYLHGYSMKLGLNSLSSVNTAIFISYAKCGCIEMAGEL 492
+ T+ ++ AC + AL + + GY++K G+++ +SV T+ YAK G + +A ++
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 493 FDEEKIDSKDIITWNSMISAYAKHGDWSQCFKLYTQMKQSDVRPDLITFLGLLTACVNAG 552
F E + + D+ T+++MIS+ A+HG ++ ++ MK ++P+ FLG+L AC + G
Sbjct: 517 FIE--VQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574
Query: 553 LVEEGRIIFKEMKESYGYEPSQEHYASMVNLLGRAGHMDEARELVKDMPFKPDARVWGPL 612
LV +G F+ MK Y P+++H+ +V+LLGR G + +A L+ F+ W L
Sbjct: 575 LVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRAL 634
Query: 613 LSACKMHSETELAELTAEKLISMEPENAGNYVLLSNIYAAAGKWNGVAKMRTFLRDRGLK 672
LS+C+++ ++ + + AE+L+ +EPE +G+YVLL NIY +G + ++R +RDRG+K
Sbjct: 635 LSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVK 694
Query: 673 KTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILE 710
K P SWI IG H F AD SHP + IYT+L ++
Sbjct: 695 KEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETMD 732
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 178/330 (53%), Gaps = 10/330 (3%)
Query: 239 LLRSTVELKSLELGRIVHCVAVVSDFCKDLSVNTALLSMYSKLASLEDAKMLFDKMSDKD 298
L ++ + S+ LG++ H + S L + LL+MY K L A+ LFD+M +++
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 299 RVVWNIMISAYYQSGFPKESLELLMCMVRSGFRADLFTAIAAVSSISTMKNIEWGKQMHA 358
+ +N +IS Y Q GF ++++EL + + + D FT A+ +++ G+ +H
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 359 NVLRNGSDYQVSVHNSLIDMYCECEDLNCARKIFDSVKTKTVVSWSSMIKGYVTHDQSLE 418
V+ NG QV + N LIDMY +C L+ A +FD + VSW+S+I GYV + E
Sbjct: 173 LVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEE 232
Query: 419 ALRLFSEMKLEGVEVDFVTIINILPAC---VNIGALEHVKYLHGYSMKLGLNSLSSVNTA 475
L L ++M +G+ + + ++L AC +N G +E +H Y+ KLG+ V TA
Sbjct: 233 PLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTA 292
Query: 476 IFISYAKCGCIEMAGELFDEEKIDSKDIITWNSMISAYAKHGDW-----SQCFKLYTQMK 530
+ YAK G ++ A +LF + SK+++T+N+MIS + + + S+ FKL+ M+
Sbjct: 293 LLDMYAKNGSLKEAIKLF--SLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 531 QSDVRPDLITFLGLLTACVNAGLVEEGRII 560
+ + P TF +L AC A +E GR I
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 253,732,329
Number of Sequences: 539616
Number of extensions: 10140494
Number of successful extensions: 33055
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 24408
Number of HSP's gapped (non-prelim): 2419
length of query: 727
length of database: 191,569,459
effective HSP length: 125
effective length of query: 602
effective length of database: 124,117,459
effective search space: 74718710318
effective search space used: 74718710318
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)